BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010642
(505 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/505 (76%), Positives = 442/505 (87%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAYSMS SPE+GFYL+ +MR++ +P NP + SF +K C++ SLMGGLQIHAR+LRDG
Sbjct: 139 MIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDG 198
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q D+ L+TTLMDLYS +K EACK+FDEIPQ DTV+WNVLISC I N+RTRDAL +FD
Sbjct: 199 HQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFD 258
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G +PDDVTCLL+LQACA+LGALEFGE++H YI EHGY +NLCNSLI MYS+
Sbjct: 259 IMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSR 318
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A+ +FK M E++VVSWSAMISG AM+G+GR+AIE+F MQ+ GV PDDQT TGV
Sbjct: 319 CGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGV 378
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSHCGLVD+G+MF DRMSK FGI PNIHHYGC+VDLLGRAGLLDQAYQLI SM +KP
Sbjct: 379 LSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKP 438
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DST+WRTLLGACRIH+H TLGERVI HLIELKAQE+GDYVLLLN+YSSVG+W+KV +LR+
Sbjct: 439 DSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRK 498
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
FM EKG+QT+PGCSTI LKG VHEFVVDD+ HPR +EIY+MLDEI KQLKIAGYVAE++S
Sbjct: 499 FMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSS 558
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
ELHNLGAEEKGN LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG YN
Sbjct: 559 ELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYN 618
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
REV+IRDR RFHHFREG+CSCN YW
Sbjct: 619 REVVIRDRTRFHHFREGQCSCNGYW 643
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/499 (72%), Positives = 426/499 (85%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
MSSSP EGF+++++MR+K + +P + SF I+C ++ CSL+GG Q+HAR+L DG+Q DS
Sbjct: 1 MSSSPTEGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSL 60
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L+T LMDLYS +K EACK+FDE+ QRDT+AWNVLISCY+RN+RTRD L +FD + E
Sbjct: 61 LLTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGE 120
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
GC+PDDVTCLL+LQACA+LGALEFGEK+H +I E GY + NLCNSLIAMYS+ G+L
Sbjct: 121 LGCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDK 180
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
AF VFKGM K+VV+WSA+ISGLAMNG+GR+AI +F M + GV PDD TFTGVLSACS+
Sbjct: 181 AFGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSN 240
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
CGLVD+GM+ RMSK+FGI+PNIHHYGC+VDLLGRAG L QAYQLI SM VKPDSTIWR
Sbjct: 241 CGLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWR 300
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
TLLGACRIH++V LGE V+EHLIELKAQE+GDYVLL NLYSSV +W+KV ELR+FM EKG
Sbjct: 301 TLLGACRIHRNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKG 360
Query: 367 LQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLG 426
+QTTP S+I LKG VHEFVVDDVSHP+ +EIY+MLDEI+KQLKIAGYVAEITSEL NL
Sbjct: 361 IQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLD 420
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
AEEK LSYHSEKLAIAFGVLATPPGTTIR+AKNLRICVDCHNFAK+LSGVYNR+VII
Sbjct: 421 AEEKRYVLSYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIIT 480
Query: 487 DRLRFHHFREGRCSCNDYW 505
D RFHHFR G CSCNDYW
Sbjct: 481 DHTRFHHFRGGHCSCNDYW 499
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/505 (69%), Positives = 416/505 (82%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RA SMS SP++G L+ MR++ I +P + SFA+K C++F L GG+Q+H + +DG
Sbjct: 75 MIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDG 134
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q D+ L+T +MDLYS ++ +ACK+FDE+P RDTVAWNV+ISC IRN RTRDAL LFD
Sbjct: 135 HQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFD 194
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ C+PDDVTCLL+LQACAHL ALEFGE+IH YI E GY +NLCNSLI+MYS+
Sbjct: 195 VMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSR 254
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A+EVFKGM K+VVSWSAMISGLAMNG+GR+AIE+F M R GV PDDQTFTGV
Sbjct: 255 CGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGV 314
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS+ G+VDEGM F RMS++FG+ PN+HHYGC+VDLLGRAGLLD+AYQLI SM VKP
Sbjct: 315 LSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKP 374
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DST+WRTLLGACRIH HVTLGERVI HLIELKAQE+GDYVLLLN+YSS G WEKV E+R+
Sbjct: 375 DSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRK 434
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M K +QTTPGCSTI LKG VHEFVVDDVSH R EIY+ LDEIN QL+IAGYV E++S
Sbjct: 435 LMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSS 494
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
ELH + +EKG LS+HSEKLA+AFGVLATPPGT +RVA NLR+CVDCHNF K+ SGVYN
Sbjct: 495 ELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYN 554
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+V++RD RFHHFR GRCSC+DYW
Sbjct: 555 RDVVLRDHNRFHHFRGGRCSCSDYW 579
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/505 (67%), Positives = 416/505 (82%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAYS+S SP EG Y++ M ++ + +P + SFA+K C+K SL+ G+QIHAR+ +G
Sbjct: 98 MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFING 157
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q DS L+T++MDLYS K EACKLFDE+PQ+D VAWNVLISC RN+RTRDAL LF+
Sbjct: 158 HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 217
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ C+PD VTCLL+LQACA L ALEFGE+IH YI +HGY ++ NLCNSLI+MYS+
Sbjct: 218 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 277
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A+EVF M EK+VVSWSAMISGL+MNGHGR+AIE+F MQ+ GV P D TFT V
Sbjct: 278 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 337
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSHCGLVDEGM F DRM ++F I PN+HHYGC+VDLLGRAG+LDQAY+LI SM V+P
Sbjct: 338 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 397
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+T+WRTLLGACRIH H LGER++EHLIELK+QE+GDYVLLLN+YSS G+W+KV ELR+
Sbjct: 398 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 457
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG+ TTP C+TI L GVVH+F VDD+SHP ++IY+ LDEINKQLKIAGY AE++S
Sbjct: 458 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 517
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
ELH L ++KG ALS HSEKLAIAFGVLATPPG TIR+A N+R C+DCHNFAK +S VYN
Sbjct: 518 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 577
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+V++RDR RFHHF+EGRCSCND+W
Sbjct: 578 RKVVVRDRSRFHHFQEGRCSCNDFW 602
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/509 (67%), Positives = 414/509 (81%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+RA+S+S +P EGF LF +R+ P NP + SFA+KCC+K L+GGLQIH ++ D
Sbjct: 83 MIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ DS LMTTLMDLYST E S +ACK+FDEIPQRDTV+WNVLISCY+RN+RTRD L LF
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLF 202
Query: 120 DNLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
D + + C KPD+VTCLL LQACA+LGAL+FG+++H +I E+G +NL N+L++MY
Sbjct: 203 DKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CGS+ A+EVF M E++VVSW+AMISGLAMNG G++AIE+F M + G+ P++QT T
Sbjct: 263 SRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 239 GVLSACSHCGLVDEGMMFLDRM-SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+LSACSH GLVDEGMMF DRM S +F I PN+HHYGC+VDLLGRA LLD+AY LI SM
Sbjct: 323 GLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSME 382
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KPDSTIWRTLLGACR+H +V LGERVI HLIE KA+E+GDYVLLLN YSSVG WEKV E
Sbjct: 383 MKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTE 442
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR M +K +QT PGCS I L+G VHEF+VDDVSHPR EIY+ML EIN+QLKIAGYVAE
Sbjct: 443 LRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502
Query: 418 ITSELHNLGA-EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
ITSELHNL + EEKG AL YHSEKLAIAFG+L TPP TTIRV KNLR CVDCHNFAK +S
Sbjct: 503 ITSELHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTIRVTKNLRTCVDCHNFAKFVS 562
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
VY+R VI+RDR RFHHF+ G CSCND+W
Sbjct: 563 DVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/509 (67%), Positives = 414/509 (81%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+RA+S+S +P EGF LF +R+ +P NP + SFA+KCC+K L+GGLQIH ++ D
Sbjct: 83 MIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ DS LMTTLMDLYST E S +ACK+FDEIP+RDTV+WNVL SCY+RN+RTRD L LF
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLF 202
Query: 120 DNLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
D + + GC KPD VTCLL LQACA+LGAL+FG+++H +I E+G +NL N+L++MY
Sbjct: 203 DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CGS+ A++VF GM E++VVSW+A+ISGLAMNG G++AIE+F M + G+ P++QT T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 239 GVLSACSHCGLVDEGMMFLDRM-SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+LSACSH GLV EGMMF DRM S +F I PN+HHYGCVVDLLGRA LLD+AY LI SM
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KPDSTIWRTLLGACR+H V LGERVI HLIELKA+E+GDYVLLLN YS+VG WEKV E
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR M EK + T PGCS I L+G VHEF+VDDVSHPR EIY+ML EIN+QLKIAGYVAE
Sbjct: 443 LRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502
Query: 418 ITSELHNLGA-EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
ITSELHNL + EEKG AL YHSEKLAIAFG+L TPPGTTIRV KNLR CVDCHNFAK +S
Sbjct: 503 ITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVS 562
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
VY+R VI+RDR RFHHF+ G CSCND+W
Sbjct: 563 DVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/508 (67%), Positives = 406/508 (79%), Gaps = 3/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGG--LQIHARVLR 58
M+RA SMS SP++G L+ MR++ I +P + SF +K C++ L +Q+H + +
Sbjct: 8 MIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFVVKSCIRLXGLYLLGGVQVHCNIFK 67
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+Q D+ L+T +MDLYS ++ +ACK+FDE+P RDTVAWNV+ISC IRN RTRDAL L
Sbjct: 68 YGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEMPPRDTVAWNVMISCCIRNNRTRDALSL 127
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
FD L C+PDDVTCLL+LQACAHL ALEFGE+IH Y+ EHGYG +NL N+LI+MY
Sbjct: 128 FDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGERIHGYMMEHGYGGALNLSNALISMY 187
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CG L A EVFKG K+VVSWSAMISGLAMNG+GR+AIESF M R G+ PDDQT T
Sbjct: 188 SRCGCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLT 247
Query: 239 GVLSACSHCGLVDEGMM-FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVLSACS+ G+VDEGMM F DRMS++FG+ PN+HHYGC+VDLLG AGLLD+A QLI SM
Sbjct: 248 GVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIMSMV 307
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
KPDST WRTLLGACRIH HVTLGERVI HLIELKAQE+GD+VLLLN+YSS G WEKV E
Sbjct: 308 EKPDSTTWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDHVLLLNIYSSAGHWEKVAE 367
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ M K +QTTPGCSTI LKGVVHEFVVDDVSH R +EIY+ LDEIN QL+IAGYV E
Sbjct: 368 VRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEINHQLRIAGYVVE 427
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
++SELH + +EKG LS+HSEKLAIAFGVLATPPGTT+RVA NLRICVDC NF K SG
Sbjct: 428 LSSELHKMDDKEKGYVLSHHSEKLAIAFGVLATPPGTTLRVANNLRICVDCFNFLKHFSG 487
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
VYN +VI+RD RFHHFR G CSC++YW
Sbjct: 488 VYNGDVILRDHNRFHHFRGGCCSCSNYW 515
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/498 (59%), Positives = 374/498 (75%), Gaps = 4/498 (0%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
S P + +MR N F + +K C+L Q+HA V+ +G+ D+ L
Sbjct: 101 SDPSDALRFLRRMRALGRRGNAFTLAILLK---PRCALAHARQLHANVVAEGHLRDALLA 157
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+LM Y+ A KLF E+P RD VAWNVLISC RN+RT+DAL LF+ + +SG
Sbjct: 158 TSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMRGRDSG 217
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PDDVTC+L+LQAC LGAL+FGE++ Y EHGYG+K+ + NSLIAMYS+CG + A+
Sbjct: 218 AEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIAMYSRCGCVDKAY 277
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF G P+K VV+WSAMISGLA NG G DAI +F M R+ V PD+QTFTGVLSACSH G
Sbjct: 278 RVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQTFTGVLSACSHSG 337
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRT 307
LVDEG F D M ++G+ PN+ HYGC+VDL+GRAGLLD+AY+L+T+ M V PD+TIWRT
Sbjct: 338 LVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNEMKVAPDATIWRT 397
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGACRIH HV LGERVI +LIELKAQ++GDYVLLLN Y++VG+W KV E+R+ M EKG+
Sbjct: 398 LLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEVRKLMQEKGI 457
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
QTTPGC+T+ G V+EF+ DD +HPR EIY+ L+EINKQL+IAGYV ++SELH+L +
Sbjct: 458 QTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYVPNVSSELHDLDS 517
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E K +AL+YHSEKLAIAF +L TP IR+AKNLR+CVDCHNF KV SG+YNR VI+RD
Sbjct: 518 EGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNFTKVFSGIYNRLVIVRD 577
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF+ G+CSCNDYW
Sbjct: 578 RTRFHHFQGGKCSCNDYW 595
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 23/271 (8%)
Query: 50 LQIHARVLRDGYQLDSQLMTT--LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
LQ+HA +LR G S + TT + L + S A + D A + L S +
Sbjct: 37 LQLHAHLLRTGLLALSPVTTTAAFLSLAAASLPSHRALAVLDH----HLTAASSLPSTFQ 92
Query: 108 RNQRTR------DALCLFDNLNREESGCKPDDVTCLLVLQA-CAHLGALEFGEKIHRYIS 160
N R DAL + G + + T ++L+ C AL ++H +
Sbjct: 93 CNSILRVLSDPSDALRFLRRM--RALGRRGNAFTLAILLKPRC----ALAHARQLHANVV 146
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
G+ L SL+A Y+ G A ++F MP +D V+W+ +IS A N +DA++
Sbjct: 147 AEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALK 206
Query: 221 SFGAM--QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
F M + +G PDD T +L AC+ G +D G +++ G + ++
Sbjct: 207 LFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVW-AYAEEHGYGAKLKVRNSLIA 265
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ R G +D+AY++ K T W ++
Sbjct: 266 MYSRCGCVDKAYRVFCGTPQKSVVT-WSAMI 295
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/478 (61%), Positives = 366/478 (76%), Gaps = 4/478 (0%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N F+ S + C +L Q+HA V+ +G+ D+ L T+L+ Y+ A K+F
Sbjct: 127 NAFSLSIVLGHCR---ALAHARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVF 183
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
DE+P RDT+AWNVLI+CY RN+RT+DAL LFD + E+G +PDDVTC+L+LQAC LGA
Sbjct: 184 DEMPVRDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGA 243
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L+FGEK+ Y +HGYG ++ + NSLI MY+KCG + A++VF P+K VV+WSAMISG
Sbjct: 244 LDFGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISG 303
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G+DAI +F M R+GV PD+QTFTGVLSACSH GLVDEG F D M ++ + P
Sbjct: 304 LASNGFGKDAISAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKP 363
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
N+HHYGC+VDL+GRAGLLDQAY+L+ M V PD+TIWRTLLGACRIH H+ LGERVI H
Sbjct: 364 NVHHYGCMVDLMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINH 423
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
LIELKAQ++GDYVLLLN Y++V DW KV E+R+ M EKG+QTTPGC+T+ L G +HEF+
Sbjct: 424 LIELKAQQAGDYVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIA 483
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHPR EIY+ LDEINK L+IAGYV ++SELH+L +E K AL+YHSEKLAIAF +
Sbjct: 484 ADASHPRKAEIYEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFAL 543
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L TP IR+AKNLR+CVDCHNF KV SGVY+R VI+RDR RFHHF+E +CSCNDYW
Sbjct: 544 LVTPQHRPIRLAKNLRVCVDCHNFTKVFSGVYHRLVIVRDRTRFHHFKEFQCSCNDYW 601
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/498 (58%), Positives = 368/498 (73%), Gaps = 4/498 (0%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
S P + ++R N F + +K CSL Q+HA V+ +G+ D+ L
Sbjct: 117 SDPSDALRFLCRVRALGRRGNAFTLAILLK---PRCSLAHARQLHANVVAEGHLRDALLA 173
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+LM Y+ A KLFDE+P RD VAWNVLI+CY RN+RT+DAL LF+ + ++S
Sbjct: 174 TSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSE 233
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PDDVTC+L+LQAC+ LGAL+FGE++ Y EHGYG ++ + NSLI MY +CG + A+
Sbjct: 234 SEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAY 293
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF G P+K VV+W+AMISGLA NG G DAI F M R+ V PD+QTFTGVLSACSH G
Sbjct: 294 RVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSG 353
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRT 307
LVDEG F D M ++G+ PN+ HYGC+VDL+GRAGLLD+AY+ +T+ M V PD+TIWRT
Sbjct: 354 LVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRT 413
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGACRIH HV LGERVI +LIELKAQ++GDYVLLLN Y++VG+W KV E+R+ M E+G+
Sbjct: 414 LLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGI 473
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
QTTPGC+T+ G VHEF+ DD +HPR EIY+ L EI KQL+IAGYV ++SELH+L +
Sbjct: 474 QTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSELHDLDS 533
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E K +AL+YHSEKLAIAF +L TP IR+AKNLR+CVDCHNF K+ S +Y R VI+RD
Sbjct: 534 EGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRD 593
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF+ G+CSCNDYW
Sbjct: 594 RTRFHHFQGGKCSCNDYW 611
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
++ Y+ + ++ LFE+MR K + P C ++ C +L G Q+ A
Sbjct: 207 LITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEE 266
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + ++ +L+ +Y +A ++F PQ+ V W +IS N DA+ +
Sbjct: 267 HGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISV 326
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAM 177
F+ + R S PD+ T VL AC+H G ++ G + + E+G + ++ +
Sbjct: 327 FEEMIR--SDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDL 384
Query: 178 YSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGH 214
+ G L A+E + D W ++ ++GH
Sbjct: 385 MGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGH 423
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 291/497 (58%), Positives = 364/497 (73%), Gaps = 4/497 (0%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
S + +MR N F+ + +K C +L Q+HA V+ +G+ DS L T
Sbjct: 391 SESDALSFLRRMRTLGRRGNAFSLAILLKPCR---TLSHARQLHANVVIEGHLRDSLLAT 447
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
+LM Y+ A K+FDE+ +DTVAWNVLI+CY RN+RT+D L LFD + R ES
Sbjct: 448 SLMRSYAICGVGDCARKVFDEMVMKDTVAWNVLITCYARNKRTKDTLWLFDEMRRGESEV 507
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
KPD+VTC+L+LQAC LGAL+FGE+I Y EHGYG ++ + NS+I MY++CG + A++
Sbjct: 508 KPDEVTCILLLQACTSLGALDFGEQIWEYAVEHGYGCELKVRNSVITMYTRCGCVEKAYQ 567
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF P+K VV+WSAMI GLA NG G DAI +F M R+GV PD QTFTGVLSACSH GL
Sbjct: 568 VFCHTPQKSVVTWSAMIMGLAANGFGEDAISAFEEMSRSGVVPDGQTFTGVLSACSHSGL 627
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRTL 308
VDEG F D M ++ ++PN+ HYGC+VDL+GRAGLLD+AY+L+ M V PD+TIWRTL
Sbjct: 628 VDEGFRFFDMMRYEYKMMPNVRHYGCIVDLMGRAGLLDEAYELVVKEMKVAPDATIWRTL 687
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGACRIH HV LGE+VI HLIELKAQ++GDYVLLLN Y++ GDWEKV E+R+ M E +Q
Sbjct: 688 LGACRIHGHVDLGEKVISHLIELKAQQAGDYVLLLNTYAAAGDWEKVAEVRKLMRENEIQ 747
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
TTPGC+T+ L G +HEF+ DD SHPR EIY LDEIN+ L+IAGYV ++S+LH+L +E
Sbjct: 748 TTPGCTTVELNGELHEFIADDASHPRKAEIYGKLDEINRHLRIAGYVPHVSSDLHDLDSE 807
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
K AL+YHSEKLAIAF +L P IR+AKNLR+CVDCHNF KV SGVYNR VI+RDR
Sbjct: 808 GKECALTYHSEKLAIAFALLVMPQRRPIRLAKNLRVCVDCHNFTKVFSGVYNRLVIVRDR 867
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF G+CSCNDYW
Sbjct: 868 TRFHHFNGGQCSCNDYW 884
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/498 (58%), Positives = 368/498 (73%), Gaps = 4/498 (0%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
S P + ++R N F + +K CSL Q+HA V+ +G+ D+ L
Sbjct: 103 SDPSDALRFLCRVRALGRRGNAFTLAILLK---PRCSLAHARQLHANVVAEGHLRDALLA 159
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+LM Y+ A KLFDE+P RD VAWNVLI+CY RN+RT+DAL LF+ + ++S
Sbjct: 160 TSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSE 219
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PDDVTC+L+LQAC+ LGAL+FGE++ Y EHGYG ++ + NSLI MY +CG + A+
Sbjct: 220 SEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAY 279
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF G P+K VV+W+AMISGLA NG G DAI F M R+ V PD+QTFTGVLSACSH G
Sbjct: 280 RVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSG 339
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRT 307
LVDEG F D M ++G+ PN+ HYGC+VDL+GRAGLLD+AY+ +T+ M V PD+TIWRT
Sbjct: 340 LVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRT 399
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGACRIH HV LGERVI +LIELKAQ++GDYVLLLN Y++VG+W KV E+R+ M E+G+
Sbjct: 400 LLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGI 459
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
QTTPGC+T+ G VHEF+ DD +HPR EIY+ L EI KQL+IAGYV ++SELH+L +
Sbjct: 460 QTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSELHDLDS 519
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E K +AL+YHSEKLAIAF +L TP IR+AKNLR+CVDCHNF K+ S +Y R VI+RD
Sbjct: 520 EGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRD 579
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF+ G+CSCNDYW
Sbjct: 580 RTRFHHFQGGKCSCNDYW 597
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
++ Y+ + ++ LFE+MR K + P C ++ C +L G Q+ A
Sbjct: 193 LITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEE 252
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + ++ +L+ +Y +A ++F PQ+ V W +IS N DA+ +
Sbjct: 253 HGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISV 312
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAM 177
F+ + R S PD+ T VL AC+H G ++ G + + E+G + ++ +
Sbjct: 313 FEEMIR--SDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDL 370
Query: 178 YSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGH 214
+ G L A+E + D W ++ ++GH
Sbjct: 371 MGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGH 409
>gi|222640613|gb|EEE68745.1| hypothetical protein OsJ_27435 [Oryza sativa Japonica Group]
Length = 461
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/384 (64%), Positives = 306/384 (79%), Gaps = 1/384 (0%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+P RDT+AWNVLI+CY RN+RT+DAL LFD + E+G +PDDVTC+L+LQAC LGAL+
Sbjct: 1 MPVRDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALD 60
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
FGEK+ Y +HGYG ++ + NSLI MY+KCG + A++VF P+K VV+WSAMISGLA
Sbjct: 61 FGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLA 120
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
NG G+DAI +F M R+GV PD+QTFTGVLSACSH GLVDEG F D M ++ + PN+
Sbjct: 121 SNGFGKDAISAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNV 180
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HHYGC+VDL+GRAGLLDQAY+L+ M V PD+TIWRTLLGACRIH H+ LGERVI HLI
Sbjct: 181 HHYGCMVDLMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLI 240
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
ELKAQ++GDYVLLLN Y++V DW KV E+R+ M EKG+QTTPGC+T+ L G +HEF+ D
Sbjct: 241 ELKAQQAGDYVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAAD 300
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHPR EIY+ LDEINK L+IAGYV ++SELH+L +E K AL+YHSEKLAIAF +L
Sbjct: 301 ASHPRKAEIYEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLV 360
Query: 450 TPPGTTIRVAKNLRICVDCHNFAK 473
TP IR+AKNLR+CVDCHNF K
Sbjct: 361 TPQHRPIRLAKNLRVCVDCHNFTK 384
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
++ Y+ + ++ LF+ MR P C ++ C +L G ++ +
Sbjct: 12 LITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVD 71
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + ++ +L+ +Y+ +A ++F E P++ V W+ +IS N +DA+
Sbjct: 72 HGYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISA 131
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAM 177
F+ + R SG PD+ T VL AC+H G ++ G K + E+ ++ ++ +
Sbjct: 132 FEEMGR--SGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDL 189
Query: 178 YSKCGSLGMAFE-VFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A+E V K M D W ++ ++GH
Sbjct: 190 MGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGH 228
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/505 (45%), Positives = 334/505 (66%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M Y+ S + EE LF +M + I + + C + L G I+ V G
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+T+L+D+Y+ + A +LFD++ +RD VAW+ +IS Y + R R+AL LF
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + P+++T + +L +CA LGALE G+ +H +I + + L +L+ Y+K
Sbjct: 316 EMQK--ANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ + EVF MP K+V+SW+ +I GLA NG G+ A+E F M V P+D TF GV
Sbjct: 374 CGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGV 433
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG MS+DFGI P I HYGC+VD+LGRAGL+++A+Q I +M ++P
Sbjct: 434 LSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQP 493
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IWRTLL +C++HK+V +GE ++ LI L+ SGDY+LL N+Y+SVG WE ++R
Sbjct: 494 NAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRG 553
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ TPGCS I L GV+HEF +D H + EIY ++++ KQ+K AGYV
Sbjct: 554 EMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAE 613
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++K +++S+HSEKLAIAFG++ +PPGTTIR+ KNLR+C DCHN K++S V+N
Sbjct: 614 ARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFN 673
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RDR RFHHF+EG CSCNDYW
Sbjct: 674 REIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R +++ SP E LF++M + + + F +K C + +L G QIHA +++ G
Sbjct: 95 MIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+ +Y+ + A ++FDE+ +R+ WN + + Y ++ + + LF
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E + D+VT + VL AC L LE GE I+RY+ E G L SL+ MY+K
Sbjct: 215 EM--LELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAK 272
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F M +DVV+WSAMISG + R+A++ F MQ+A + P++ T +
Sbjct: 273 CGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSI 332
Query: 241 LSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
LS+C+ G ++ G F+ + + ++D + G ++ + ++ M
Sbjct: 333 LSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT----ALMDFYAKCGSVESSIEVFGKMP 388
Query: 298 VKPDSTIWRTLL 309
VK + W L+
Sbjct: 389 VK-NVLSWTVLI 399
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 138/262 (52%), Gaps = 6/262 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFE-ACKLFDEIPQRDTVAWNVLISCYIR 108
+IHA +++ L ++ L++ + S + A +F +I + D+ A+N++I +
Sbjct: 42 EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
Q +A+ LF ++ E+ +PD+ T +L+ C+ L AL GE+IH I + G+GS
Sbjct: 102 KQSPHEAILLFKEMH--ENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHG 159
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+LI MY+ CG + +A VF M E++V +W++M +G +G+ + ++ F M
Sbjct: 160 FVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL 219
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
+ D+ T VL+AC ++ G +++R ++ G+ N +VD+ + G +D
Sbjct: 220 DIRFDEVTLVSVLTACGRLADLELG-EWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278
Query: 289 AYQLITSMGVKPDSTIWRTLLG 310
A +L M + D W ++
Sbjct: 279 ARRLFDQMD-RRDVVAWSAMIS 299
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/505 (44%), Positives = 329/505 (65%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ S +P L+ +M I + F +K K + G ++H+ +R+G
Sbjct: 111 MIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNG 170
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + TL+ +Y+ + A KLF+ + +R+ V WN +I+ Y N R +AL LF
Sbjct: 171 FESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFR 230
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G +PD T + +L ACA LGAL G + H Y+ + G ++ N+L+ +Y+K
Sbjct: 231 EMGLR--GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAK 288
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +VF M EK VVSW+++I GLA+NG G++A+E F ++R G+ P + TF GV
Sbjct: 289 CGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGV 348
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSHCG+VDEG + RM +++GI+P I HYGC+VDLLGRAGL+ QA++ I +M ++P
Sbjct: 349 LYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQP 408
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +WRTLLGAC IH H+ LGE L++L+ + SGDYVLL NLY+S W V ++R
Sbjct: 409 NAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRR 468
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ TPG S + L+ +HEFV+ D SHP+ EIY L EI K LK+ GYV I++
Sbjct: 469 TMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISN 528
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK ALSYHSEK+AIAF ++ T G IRV KNLR+C DCH K++S V++
Sbjct: 529 VLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFD 588
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RDR RFHHF++G CSC DYW
Sbjct: 589 REIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYG-SKMNLCNSLI-AMYSKCGSLGMAFEVFKG 193
C+ +L +CA +F +IH + HG + ++ LI + S C + A ++F
Sbjct: 42 CIALLLSCAS-SKFKF-RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQ 99
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ ++ +W+ MI G A + + A+E + M + + PD T+ +L A + V EG
Sbjct: 100 IQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREG 159
Query: 254 --------------MMFL--------------DRMSKDFGILP--NIHHYGCVVDLLGRA 283
++F+ + K F ++ N+ + V++
Sbjct: 160 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALN 219
Query: 284 GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY- 339
G ++A L M GV+PD +LL AC + LG R H+ +K G+
Sbjct: 220 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRA--HVYMVKVGLDGNLH 277
Query: 340 --VLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL+LY+ G + ++ + M EK +
Sbjct: 278 AGNALLDLYAKCGSIRQAHKVFDEMEEKSV 307
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/505 (44%), Positives = 328/505 (64%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ S +P F + +M + + F +K K ++ G IH+ +R+G
Sbjct: 89 IIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNG 148
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + +L+ +Y+ + A K+F+ + +RD VAWN +I+ + N R +AL LF
Sbjct: 149 FESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFR 208
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G +PD T + +L A A LGALE G ++H Y+ + G ++ NSL+ +Y+K
Sbjct: 209 EMSVE--GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAK 266
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A VF M E++ VSW+++I GLA+NG G +A+E F M+ G+ P + TF GV
Sbjct: 267 CGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGV 326
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSHCG++DEG + RM ++ GI+P I HYGC+VDLL RAGL+ QAY+ I +M V+P
Sbjct: 327 LYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQP 386
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IWRTLLGAC IH H+ LGE HL+ L+ + SGDYVLL NLY+S W V+ +R
Sbjct: 387 NAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRR 446
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G++ TPG S + L V+EF + D SHP+ ++Y +L++I + LK+ GYV +
Sbjct: 447 SMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTAN 506
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK ALSYHSEK+AIAF +L TPPGT IRV KNLR+C DCH K+++ +Y+
Sbjct: 507 VLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYD 566
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE++IRDR RFHHFR G CSC DYW
Sbjct: 567 REIVIRDRSRFHHFRGGSCSCKDYW 591
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/505 (45%), Positives = 322/505 (63%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ P E LF +M + N + C + L Q+H + G
Sbjct: 209 MIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETG 268
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L + LMD+Y A LF+++P+++ WN++I+ ++ + +AL LF+
Sbjct: 269 IGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG K D VT +L AC HLGALE G+ +H YI + + L +L+ MY+K
Sbjct: 329 EM--QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAK 386
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF+ MPEKDV++W+A+I GLAM G G A+E F MQ + V PD TF GV
Sbjct: 387 CGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGV 446
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV+EG+ + + M +GI P+I HYGC+VD+LGRAG + +A LI +M + P
Sbjct: 447 LAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAP 506
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D + LL ACRIH ++ + ER + LIEL + G YVLL N+YSS+ +WE K++RE
Sbjct: 507 DYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRE 566
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ ++ PGCS I + GVVHEFV DVSHP+ +EIY+ LD++ ++LK AGYV + +
Sbjct: 567 LMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSE 626
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK N LS HSEKLAIAFG+L+T PGT IRV KNLR+C DCH+ K +S VYN
Sbjct: 627 VLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYN 686
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR RFHHF +G CSC D+W
Sbjct: 687 REIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + P + ++ M + + + F K C C G Q+H + G
Sbjct: 111 IIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLG 167
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + TLM++YS A K+FD++ + V+W +I Y + +A+ LF
Sbjct: 168 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFR 227
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E + KP+++T + VL ACA LE +++H+YI E G G L ++L+ +Y K
Sbjct: 228 RM--EIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCK 285
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG +A ++F MPEK++ W+ MI+G + +A+ F MQ +GV D T +
Sbjct: 286 CGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASL 345
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H G ++ G + K+ I ++ +VD+ + G ++ A ++ M K
Sbjct: 346 LIACTHLGALELGKWLHVYIEKE-KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK- 403
Query: 301 DSTIWRTLL 309
D W L+
Sbjct: 404 DVMTWTALI 412
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 46/365 (12%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEK-SFEACKL-FDEIPQRDTVAWN 100
C+ M L QIHA++LR +D + ++ + + S +L F++IP T N
Sbjct: 50 CTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCN 109
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
+I Y R A+ + + + G PD T + ++C G L G+++H + +
Sbjct: 110 SIIRGYTNKNLPRQAILFYQLMMLQ--GLDPDRFTFPSLFKSC---GVLCEGKQLHCHST 164
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
+ G+ S + N+L+ MYS CG L A +VF M K VVSW+ MI A +AI+
Sbjct: 165 KLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIK 224
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVDEGMMF--------LD--- 258
F M+ A V P++ T VL+AC+ H + + G+ F +D
Sbjct: 225 LFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYC 284
Query: 259 -----RMSKD-FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRT 307
+++D F +P N+ + +++ ++A L M GVK D +
Sbjct: 285 KCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 344
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNE 364
LL AC + LG+ + H+ K + D L L+++Y+ G E + + M E
Sbjct: 345 LLIACTHLGALELGKWL--HVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 402
Query: 365 KGLQT 369
K + T
Sbjct: 403 KDVMT 407
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/505 (44%), Positives = 326/505 (64%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ +E LFE MR+ +P N + C + +L G + + + G
Sbjct: 232 MIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRG 291
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+ L+D+YS A +LFD++ +RD ++WNV+I Y ++AL LF
Sbjct: 292 LCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFR 351
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG +P ++T L +L +CAHLGA++ G+ IH YI+++ +L SLI +Y+K
Sbjct: 352 EM--LASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAK 409
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A +VF GM K + SW+AMI GLAM+G A E F M G+ P++ TF G+
Sbjct: 410 CGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGI 469
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC H GLVD G F M +D+ I P HYGC++DLLGRAGL ++A L+ +M VKP
Sbjct: 470 LSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKP 529
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IW +LLGACR H V LGE V E L EL+ G YVLL N+Y+ G W+ V +R
Sbjct: 530 DGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT 589
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+N++G++ PGC+TI + VVHEF+V D HP+ +IY+ML+E+++QLK+ G+VA+ +
Sbjct: 590 RLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSE 649
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+++ E K ALS+HSEKLAIAFG+++T PGT IR+ KNLR+C +CH+ K++S ++N
Sbjct: 650 VLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFN 709
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RDR RFHHF++G CSCNDYW
Sbjct: 710 REIIARDRNRFHHFKDGSCSCNDYW 734
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 206/431 (47%), Gaps = 68/431 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R SMS SP F +M + N + F +K C K S G QIHA VL+ G
Sbjct: 100 MIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLG 159
Query: 61 YQLDSQLMTTLMDLYS----------TFEK-------SFEAC--------------KLFD 89
+ D + T+L+++Y+ F++ SF A +LFD
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFD 219
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
E+P +D V+WN +I+ Y + R+++AL LF+++ + + P++ T + VL ACA AL
Sbjct: 220 EMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK--ANVPPNESTIVSVLSACAQSNAL 277
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G + +I + G S + L N+LI MYSKCG L A E+F M E+DV+SW+ MI G
Sbjct: 278 DLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGY 337
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI--- 266
++A+ F M +GV P + TF +L +C+H G +D G ++K+F
Sbjct: 338 THMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVST 397
Query: 267 ---------------------------LPNIHHYGCVVDLLGRAGLLDQAYQLITSM--- 296
+ ++ + ++ L G D+A++L + M
Sbjct: 398 SLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSD 457
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE--LKAQESGDYVLLLNLYSSVGDWEK 354
G++P+ + +L AC+ V LG++ +++ + +S Y +++L G +E+
Sbjct: 458 GIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEE 517
Query: 355 VKELREFMNEK 365
+ L + M K
Sbjct: 518 AESLLQNMEVK 528
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 39/294 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYI 107
QIHA +++ G ++ L++ +S +S + A LF+ I + + WN +I
Sbjct: 47 QIHAHIIKTGLHNTLFALSKLIE-FSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ AL F + SG +P+ T +L++CA L + G++IH ++ + G+ S
Sbjct: 106 MSLSPALALVFF--VRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSD 163
Query: 168 MNLCNSLIAMYSKCGSLG-------------------------------MAFEVFKGMPE 196
+ + SLI MY++ G + A ++F MP
Sbjct: 164 VFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPV 223
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
KDVVSW+AMI+G A G ++A+ F M++A V P++ T VLSAC+ +D G
Sbjct: 224 KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSM 283
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ +D G+ N+ ++D+ + G L A +L M ++ D W ++G
Sbjct: 284 RSWI-EDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMIG 335
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/505 (43%), Positives = 323/505 (63%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + + E +F+ M + + + + C + G + V G
Sbjct: 191 IITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKG 250
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LMT L+D+Y+ + +A +LFD + RD VAW+ +IS Y + + R+AL LF
Sbjct: 251 LVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFS 310
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E +P+DVT + VL ACA LGALE G+ +H YI + L +L+ Y+K
Sbjct: 311 EMQLAE--VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAK 368
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E F+ MP K+ +W+A+I G+A NG GR+A+E F +M++A + P D TF GV
Sbjct: 369 CGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGV 428
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH LV+EG D M++D+GI P HYGCVVDLLGRAGL+D+AYQ I +M ++P
Sbjct: 429 LMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEP 488
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IWR LL +C +HK+V +GE ++ ++ L SGDY+LL N+Y+SVG W+ +R+
Sbjct: 489 NAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRK 548
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ TPGCS I L GVV EF +D HP++ EIYQ ++E+ ++K+AGY+
Sbjct: 549 EMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTAD 608
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ EK ++S+HSEKLAIAFG++ PG TIR++KNLR+C DCH+ K++S VYN
Sbjct: 609 VRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYN 668
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RDR RFHHF++G CSCNDYW
Sbjct: 669 REIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 159/313 (50%), Gaps = 11/313 (3%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RA + PE+ +LF E + + + + A+K C + C+L G I A ++
Sbjct: 89 LMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKR 148
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D ++++L+ +Y++ A LFD + + V WN +I+ Y++N + + +F
Sbjct: 149 GLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G D++T + V+ AC +G + G+ + Y+ E G NL +LI MY+
Sbjct: 209 KGM--LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYA 266
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG LG A +F GM +DVV+WSAMISG R+A+ F MQ A V P+D T
Sbjct: 267 KCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVS 326
Query: 240 VLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
VLSAC+ G ++ G ++ R I+ +VD + G +D A + SM
Sbjct: 327 VLSACAVLGALETGKWVHSYIRRKRLSLTIILGT----ALVDFYAKCGCIDDAVEAFESM 382
Query: 297 GVKPDSTIWRTLL 309
VK +S W L+
Sbjct: 383 PVK-NSWTWTALI 394
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
P T +NVL+ + DAL LF + S C PD T L++C+ + L+
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVC-PDQHTVACALKSCSRMCTLDV 137
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G I Y + G + + +SLI MY+ C + A +F + E VV W+A+I+
Sbjct: 138 GRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMK 197
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
NG+ + +E F M GV D+ T V++AC G G + + + G++ N +
Sbjct: 198 NGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEK-GLVRNRN 256
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++D+ + G L +A +L M + D W ++
Sbjct: 257 LMTALIDMYAKCGELGKARRLFDGMQSR-DVVAWSAMI 293
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/538 (43%), Positives = 334/538 (62%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI--KCCMKFCSLMGGLQIHARVLR 58
++RAY+ S +P + + +M + + P +F + K C + SL G IH+ V +
Sbjct: 106 LIRAYAFSPNPIDAVVFYSEMTESSV-VFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFK 164
Query: 59 DGYQLDSQLMTTLMDLYST----------FEKSFE---------------------ACKL 87
G+ + + L+ +Y++ F+++ E A ++
Sbjct: 165 LGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRM 224
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F+ +P RD V+W+V+I+ Y++ R ++ L LF ++ E+ +P++ + L ACAHLG
Sbjct: 225 FEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEK--IEPNESVLVNALSACAHLG 282
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
A+E G+ I RY+ + L +LI MYSKCGS+ A EVF M EK+V++WSAMI+
Sbjct: 283 AMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMIN 342
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GLA+NG G+DA+ F M+ GV P++ TF G+L+ACSH LVDEG F M+ +G+
Sbjct: 343 GLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLK 402
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
PN HH+ C+VDL GRAG+LDQA +I SM KP+S IW LL ACRIH LGE+V +
Sbjct: 403 PNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKR 462
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L+EL G YVLL N+Y++ G W++V ELR M E+ + TPGCS I L +HEFV
Sbjct: 463 LLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVA 522
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHP++ IY L E++++LK AGY + L ++ EEK AL +HSEKLAIAFG+
Sbjct: 523 GDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGL 582
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ T PGTTIR+ KNLR+C DCH+ K++S +YNRE+I+RDR RFHHFR+G CSC D+W
Sbjct: 583 IKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 37/324 (11%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYS-TFEKSFE 83
IPT C + I + C + L QIHA+ + G D+ + + ++ + + S
Sbjct: 27 IPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIP 86
Query: 84 ACK-LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+ LF I + D N LI Y + DA+ + + E S PD T L+L+A
Sbjct: 87 YARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMT-ESSVVFPDVHTFPLLLKA 145
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG---SLGMAFE---------- 189
C+ + +L GE IH ++ + G+ S++++ N L+ MY+ CG S G+ F+
Sbjct: 146 CSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASW 205
Query: 190 ------------------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+F+ MP++DVVSWS MI+G ++ + F M +
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIE 265
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P++ LSAC+H G +++G +++R + + + ++D+ + G +++A +
Sbjct: 266 PNESVLVNALSACAHLGAMEQG-QWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE 324
Query: 292 LITSMGVKPDSTIWRTLLGACRIH 315
+ M K + W ++ I+
Sbjct: 325 VFHKMKEK-NVLAWSAMINGLAIN 347
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/506 (44%), Positives = 331/506 (65%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S EE F++M++ + N + C + SL G + + + G
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHG 294
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+ L+D+YS +A LF+ I ++D ++WNV+I Y ++AL LF
Sbjct: 295 LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFR 354
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAMYS 179
+ ++S +P+DVT + +L ACA+LGAL+ G+ IH YI + G + +L SLI MY+
Sbjct: 355 KM--QQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYA 412
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG++ A +VF GM K + SW+AMISGLAM+GH A+E F M+ G PDD TF G
Sbjct: 413 KCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVG 472
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH GLV+ G M +D+ I P + HYGC++DLLGRAGL D+A L+ +M +K
Sbjct: 473 VLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK 532
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IW +LLGACR+H +V LGE +HL EL+ + G YVLL N+Y++ G W+ V +R
Sbjct: 533 PDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIR 592
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+N+KG++ PGCS+I + VVHEF+V D H + +IY+MLDEI++ L+ AG+V + +
Sbjct: 593 TKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTS 652
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L+++ E K +LS+HSEKLAIAFG+++T P TTIR+ KNLR+C +CH+ K++S ++
Sbjct: 653 EVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIF 712
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+I RDR RFHHF++G CSC DYW
Sbjct: 713 NREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 183/360 (50%), Gaps = 36/360 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R S+SSSP + +M + N + F +K C K + G QIH VL+ G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSF---------------------EACKLFD 89
+ D + T+L+++Y+ F KS +A +LF+
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP RD V+WN +I+ Y ++ R +AL F + R + P++ T + VL ACA G+L
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR--ANVAPNESTMVTVLSACAQSGSL 280
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G + +I +HG GS + L N+LI MYSKCG L A ++F+G+ EKD++SW+ MI G
Sbjct: 281 ELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+ ++A+ F MQ++ V P+D TF +L AC++ G +D G + K F L N
Sbjct: 341 SHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN 400
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHL 328
+ ++D+ + G ++ A Q+ G+KP S W ++ +H H + + +
Sbjct: 401 TSLWTSLIDMYAKCGNIEAAKQVFA--GMKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 40/308 (12%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFEACKLFDEIPQR 94
+ C F +L QIH+++++ G ++ L++ S F A LF+ I Q
Sbjct: 39 LSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+ WN +I + A+ + + G +P+ T +L++CA +GA + G++
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFY--VRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF----------------------- 191
IH ++ + G S + SLI MY++ G LG A VF
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 192 --------KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ +P +D VSW+AMI+G A +G +A+ F M+RA V P++ T VLSA
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+ G ++ G ++ +D G+ N+ ++D+ + G LD+A L + K D
Sbjct: 274 CAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK-DII 331
Query: 304 IWRTLLGA 311
W ++G
Sbjct: 332 SWNVMIGG 339
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/537 (41%), Positives = 333/537 (62%), Gaps = 35/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+R +S S +P++ F+ + + RQ +P N F +K C K + G Q H +++
Sbjct: 90 MIRGHSGSKNPDQAFHFYVQSQRQGLLPDN-LTFPFLVKSCTKLHCISMGSQAHGHIIKH 148
Query: 60 GYQLDSQLMTTLMDLYSTFE------------------------KSFEAC-------KLF 88
G++ D + +L+ +Y+TF + F C KLF
Sbjct: 149 GFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLF 208
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++P+++ V W+ +IS Y +N A+ LF L + G + ++ + V+ +CAHLGA
Sbjct: 209 DQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVL--QSQGVRANETVMVSVISSCAHLGA 266
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
LE GE+ H Y+ ++G + L +L+ MY++CGS+ A VF+ +PE+D +SW+A+I+G
Sbjct: 267 LELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAG 326
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LAM+G+ +++ F M AG+ P D TFT VLSACSH GLV+ G + M +D + P
Sbjct: 327 LAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEP 386
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ HYGC+VDLLGRAG L++A + + M VKP++ +W LLGACRIHK+ +GERV + L
Sbjct: 387 RLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKIL 446
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
I+L Q SG YVLL N+Y++ +WEKV E+R+ M KGL+ PG S I L G VH+F +
Sbjct: 447 IQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIG 506
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
D SHP +++I +M +EI +++ AGY L ++ EEK +AL HSEKLAIAFG++
Sbjct: 507 DSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMM 566
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ GT IR+ KNLR+C DCH K++S V+ RE+I+RDR RFHHFR+G CSC DYW
Sbjct: 567 RSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/493 (46%), Positives = 313/493 (63%), Gaps = 4/493 (0%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
+++ +M K + N F I+ C ++ G QIHA VL+ G+ D + L+ +
Sbjct: 79 IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 138
Query: 75 YSTFEKSFEACKLFDEIPQRD--TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
Y F+ +A ++FD +PQRD +V+WN +I+ Y+++ R +A LFD + E D
Sbjct: 139 YVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLEN--VVLD 196
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+L AC LGALE G+ IH YI + G L ++I MY KCG L A EVF
Sbjct: 197 KFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFN 256
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+P+K + SW+ MI GLAM+G G AIE F M+R V PD TF VLSAC+H GLV+E
Sbjct: 257 ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE 316
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + M++ G+ P + H+GC+VDLLGRAGLL++A +LI M V PD+ + L+GAC
Sbjct: 317 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGAC 376
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
RIH + LGE++ + +IEL+ SG YVLL NLY+S G WE V ++R+ MN++G++ PG
Sbjct: 377 RIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPG 436
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I + V EF+ +HP+ EIY LDEI + ++ GYV + LH++ EEK N
Sbjct: 437 FSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKEN 496
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L YHSEKLAIAFG+L T PG T+R++KNLRIC DCH +K++S VY+RE+IIRDR RFH
Sbjct: 497 PLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFH 556
Query: 493 HFREGRCSCNDYW 505
HFR G CSC DYW
Sbjct: 557 HFRMGGCSCKDYW 569
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY S+ E F LF++MR + + + F + + C +L G IH + + G
Sbjct: 168 MIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSG 227
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LDS+L TT++D+Y +A ++F+E+PQ+ +WN +I + + A+ LF
Sbjct: 228 IELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 287
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ RE PD +T + VL ACAH G +E G+ +Y++E G M ++ +
Sbjct: 288 EMEREM--VAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG 345
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A ++ MP D A++ ++G+
Sbjct: 346 RAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 381
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 39/341 (11%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVL 102
CS M L Q H++++R G D+ M ++ + +
Sbjct: 30 CSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISK----------------------- 66
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
S Y+R Q R+ C+F P+ T +++AC A+E G++IH ++ +
Sbjct: 67 -SGYLRWQLARN--CIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKF 123
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD--VVSWSAMISGLAMNGHGRDAIE 220
G+G+ N+LI MY SL A VF MP++D VSW+AMI+ + +A
Sbjct: 124 GFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFA 183
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
F M+ V D +LSAC+ G +++G + K GI + V+D+
Sbjct: 184 LFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMY 242
Query: 281 GRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK----AQES 336
+ G L++A ++ + K S+ W ++G +H GE IE E++ A +
Sbjct: 243 CKCGCLEKASEVFNELPQKGISS-WNCMIGGLAMHGK---GEAAIELFKEMEREMVAPDG 298
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
+V +L+ + G E+ K ++M E L PG G
Sbjct: 299 ITFVNVLSACAHSGLVEEGKHYFQYMTEV-LGLKPGMEHFG 338
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/536 (41%), Positives = 328/536 (61%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARV---- 56
++ AY+ EE LF M K++ + C K L G ++H+ V
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 249
Query: 57 ----------LRDGY----QLDSQL-------------MTTLMDLYSTFEKSFEACKLFD 89
+ D Y ++DS L TT++ ++ + A FD
Sbjct: 250 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 309
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++P++D V+W +I YIR+ R ++AL LF N+ + + KPD+ T + VL ACAHLGAL
Sbjct: 310 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM--QATNVKPDEFTMVSVLTACAHLGAL 367
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E GE I YI + + + + N+LI MY KCG + A +F+ M ++D +W+AMI GL
Sbjct: 368 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGL 427
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A+NGHG A++ F M +A + PD+ T+ GVLSAC+H GLVD+G + RM+ GI PN
Sbjct: 428 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN 487
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLL RAG L +AY++I +M +K +S +W LL CR+++ + E V++ ++
Sbjct: 488 IAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL 547
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ YVLL N+Y++ W ++ELR+ M +KG++ TPGCS I + G VHEFV D
Sbjct: 548 ELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGD 607
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP+ I LD++ + LK+AGY +I+ ++ E+K N++ HSEKLAIAFG++
Sbjct: 608 RSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLIN 667
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+PPG TIR+ KNLR+C+DCHN AK++S VYNREVI+RDR RFHHF+ G CSC DYW
Sbjct: 668 SPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 178/383 (46%), Gaps = 45/383 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS P+ G L+ +M ++ + + + F K + +L G Q+H VL+ G
Sbjct: 89 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 148
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + + T L+ +Y + A +FD P+ D + WN++IS Y + + ++ LF
Sbjct: 149 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF- 207
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E+ P VT +LVL AC+ L L G+K+H Y+ S + L N++I MY+
Sbjct: 208 -LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYAD 266
Query: 181 CGSLGMAFEVFKG-------------------------------MPEKDVVSWSAMISGL 209
CG + A +F+ MPEKD VSW+AMI G
Sbjct: 267 CGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGY 326
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG---MMFLDRMSKDFGI 266
+ ++A+E F MQ V PD+ T VL+AC+H G ++ G ++DR I
Sbjct: 327 IRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK----I 382
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
++ ++D+ + G +D+A + M + D W ++ ++ H GE+ ++
Sbjct: 383 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGH---GEKALD 438
Query: 327 HLIE-LKAQESGDYVLLLNLYSS 348
LKA D + + + S+
Sbjct: 439 MFSNMLKASILPDEITYIGVLSA 461
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 13/288 (4%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQ-IHARVLRDGYQLDSQLMTTLMDLYSTFEK-SFE- 83
PT+P ++ C M LQ +H + ++ G + L +M T E F+
Sbjct: 17 PTHPLIS------LLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 70
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDEIP+ + WN +I Y R + + L+ + R G KPD T + +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRR--GVKPDRYTFPFLFKGF 128
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
ALE+G ++H ++ +HG + + +L+ MY CG L A VF P+ DV++W+
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+IS G ++ F M+ V P T VLSACS + G + K+
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK-VHSYVKN 247
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ N+ ++D+ G +D A + SM + D W T++
Sbjct: 248 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSG 294
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 322/505 (63%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AY + E +F+ M + + + + C + G + V +G
Sbjct: 192 IVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEG 251
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+T LMD+Y+ + +A +LFD + RD VAW+ +IS Y + + R+AL LF
Sbjct: 252 LARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFS 311
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + +P+DVT + VL ACA LGALE G+ +H Y+ L +L+ Y+K
Sbjct: 312 EM--QLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAK 369
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E F+ MP K+ +W+A+I G+A NG GR+A+E F +M+ AG+ P D TF GV
Sbjct: 370 CGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGV 429
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH LV+EG D M++D+GI P + HYGC+VDLLGRAGL+D+AYQ I +M ++P
Sbjct: 430 LMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEP 489
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IWR LL +C +H++V +GE ++ +I L SGDYVLL N+Y+S G W+ +R+
Sbjct: 490 NAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRK 549
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ TPGCS I L GVV EF +D HP + EIYQ ++E+ ++K+AGYV
Sbjct: 550 EMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTAD 609
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ EK ++S+HSEKLAIAFG++ PG TIR++KNLR+C DCH+ K++S VY+
Sbjct: 610 VRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYD 669
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RDR FHHF++G CSCNDYW
Sbjct: 670 REIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 6/311 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RA+ + PE+ +LF +M P + + A+K C + C+L G + A ++
Sbjct: 89 LMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVK 148
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G D ++++L+ +Y++ A +FD + V WN +++ Y++N + + +
Sbjct: 149 RGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEM 208
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E G D+VT + V+ AC +G + G+ + ++ E G L +L+ MY
Sbjct: 209 FKGM--LEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY 266
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG +G A +F GM +DVV+WSAMISG R+A+ F MQ A V P+D T
Sbjct: 267 AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMV 326
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLSAC+ G ++ G + + L I +VD + G +D A + SM V
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTA-LVDFYAKCGCIDDAVEAFESMPV 385
Query: 299 KPDSTIWRTLL 309
K +S W L+
Sbjct: 386 K-NSWTWTALI 395
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 16/268 (5%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI---------PQRDTVAWNV 101
Q+HA +++ G +L + +S E + + L P T +NV
Sbjct: 34 QLHAALIKSG-----ELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNV 88
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
L+ ++ DAL LF + S C D T L++C+ + AL+ G + Y +
Sbjct: 89 LMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVK 148
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
G + + +SLI MY+ CG + A VF E VV W+A+++ NG + +E
Sbjct: 149 RGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEM 208
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
F M GV D+ T V++AC G G + ++ G+ N ++D+
Sbjct: 209 FKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEE-GLARNPKLVTALMDMYA 267
Query: 282 RAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ G + +A +L M + D W ++
Sbjct: 268 KCGEIGKARRLFDGMQSR-DVVAWSAMI 294
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/536 (41%), Positives = 327/536 (61%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARV---- 56
++ AY+ EE LF M K++ + C K L G ++H+ V
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 270
Query: 57 ----------LRDGY----QLDSQL-------------MTTLMDLYSTFEKSFEACKLFD 89
+ D Y ++DS L TT++ ++ + A FD
Sbjct: 271 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 330
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++P++D V+W +I YIR+ R ++AL LF N+ + + KPD+ T + VL ACAHLGAL
Sbjct: 331 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM--QATNVKPDEFTMVSVLTACAHLGAL 388
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E GE I YI + + + + N+LI MY KCG + A +F+ M ++D +W+AMI GL
Sbjct: 389 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGL 448
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A+NGHG A++ F M +A + PD+ T+ GVLSAC+H GLVD+G + RM+ GI PN
Sbjct: 449 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN 508
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLL RAG L +AY++I +M +K +S +W LL CR+++ + E V++ ++
Sbjct: 509 IAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL 568
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ YVLL N+Y++ W ++ELR+ M +KG++ PGCS I + G VHEFV D
Sbjct: 569 ELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGD 628
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP+ I LD++ + LK+AGY +I+ ++ E+K N++ HSEKLAIAFG++
Sbjct: 629 RSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLIN 688
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+PPG TIR+ KNLR+C+DCHN AK++S VYNREVI+RDR RFHHF+ G CSC DYW
Sbjct: 689 SPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 178/383 (46%), Gaps = 45/383 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS P+ G L+ +M ++ + + + F K + +L G Q+H VL+ G
Sbjct: 110 MIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG 169
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + + T L+ +Y + A +FD P+ D + WN++IS Y + + ++ LF
Sbjct: 170 LQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF- 228
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E+ P VT +LVL AC+ L L G+K+H Y+ S + L N++I MY+
Sbjct: 229 -LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYAD 287
Query: 181 CGSLGMAFEVFKG-------------------------------MPEKDVVSWSAMISGL 209
CG + A +F+ MPEKD VSW+AMI G
Sbjct: 288 CGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGY 347
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG---MMFLDRMSKDFGI 266
+ ++A+E F MQ V PD+ T VL+AC+H G ++ G ++DR I
Sbjct: 348 IRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK----I 403
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
++ ++D+ + G +D+A + M + D W ++ ++ H GE+ ++
Sbjct: 404 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGH---GEKALD 459
Query: 327 HLIE-LKAQESGDYVLLLNLYSS 348
LKA D + + + S+
Sbjct: 460 MFSNMLKASILPDEITYIGVLSA 482
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 13/288 (4%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQ-IHARVLRDGYQLDSQLMTTLMDLYSTFEK-SFE- 83
PT+P ++ C M LQ +H + ++ G + L +M T E F+
Sbjct: 38 PTHPLIS------LLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 91
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDEIP+ + WN +I Y R + + L+ + R G KPD T + +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRR--GVKPDRYTFPFLFKGF 149
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
ALE+G ++H ++ +HG + + +L+ MY CG L A VF P+ DV++W+
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+IS G ++ F M+ V P T VLSACS + G + K+
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK-VHSYVKN 268
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ N+ ++D+ G +D A + SM + D W T++
Sbjct: 269 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSG 315
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 334/555 (60%), Gaps = 54/555 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M + YS + P+ G L+ +M ++ + + + F K + +L G ++H V++
Sbjct: 85 MFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVK-- 142
Query: 61 YQLDSQLM--TTLMDLYS----------TFEKSFE------------------------- 83
Y LDS + L+++YS F+ S +
Sbjct: 143 YGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTA 202
Query: 84 -------------ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
A K F ++P+RD V+W +I Y+R ++AL LF + + S K
Sbjct: 203 IVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM--QTSKIK 260
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD+ T + VL ACA LGALE GE I YI ++ + + N+LI MY KCG++ MA +
Sbjct: 261 PDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSI 320
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F +P++D +W+AM+ GLA+NG G +A+ F M +A V PD+ T+ GVLSAC+H G+V
Sbjct: 321 FNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMV 380
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
DEG F M+ GI PNI HYGC+VDLLG+AG L +A+++I +M +KP+S +W LLG
Sbjct: 381 DEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLG 440
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACRIHK + ER IE ++EL+ YVL N+Y++ W+K++ELR+ M ++G++ T
Sbjct: 441 ACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKT 500
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
PGCS I + G+VHEFV D SHP+ EIY L+++ LKIAGY + ++ E+K
Sbjct: 501 PGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDK 560
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
NA+ HSEKLAIAFG++ + PG TIR+ KNLR+C+DCH+ AK++S VY+REVI+RDR R
Sbjct: 561 ENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTR 620
Query: 491 FHHFREGRCSCNDYW 505
FHHFR G CSC DYW
Sbjct: 621 FHHFRHGSCSCKDYW 635
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 37/312 (11%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYST--FEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
QIH+R ++ G + + ++ + F A +LFD IP+ +WN++ Y R
Sbjct: 32 QIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSR 91
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + L+ L E KPD T + + AL+ G ++H ++ ++G S +
Sbjct: 92 IACPKLGVSLY--LEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNV 149
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
N+LI MYS CG + MA +F + DVV+W+AMISG N +D I
Sbjct: 150 FAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY--NRIKKDVI--------- 198
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH--YGCVVDLLGRAGLL 286
++T +++ + G VD + +M P H + ++D R
Sbjct: 199 -------SWTAIVTGFVNTGQVDAARKYFHKM-------PERDHVSWTAMIDGYLRLNCY 244
Query: 287 DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--L 341
+A L M +KPD ++L AC + LGE I I+ ++ +V
Sbjct: 245 KEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEW-IRTYIDKNKVKNDTFVGNA 303
Query: 342 LLNLYSSVGDWE 353
L+++Y G+ E
Sbjct: 304 LIDMYFKCGNVE 315
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/537 (43%), Positives = 320/537 (59%), Gaps = 33/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A++ + PE+ LF KM ++ + N + C K L G + + + R G
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG 257
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT------------------------ 96
++D L ++D+Y+ +A KLFDE+P+RD
Sbjct: 258 IKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN 317
Query: 97 -------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
AWNVLIS Y +N + ++AL +F+ L + KPD+VT + L ACA LGA+
Sbjct: 318 AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA-KPDEVTLVSTLSACAQLGAI 376
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G IH YI G +L +SL+ MY+KCGSL A EVF + E+DV WSAMI+GL
Sbjct: 377 DLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGL 436
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
M+G G+ AI+ F MQ A V P+ TFT VL ACSH GLVDEG +F M +G++P
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPE 496
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HY C+VD+LGRAG L++A +LI M P +++W LLGAC +H +V LGE + L+
Sbjct: 497 MKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLL 556
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
+L+ + G VLL N+Y+ G WEKV ELR+ M + L+ PGCS+I G VHEF+V D
Sbjct: 557 KLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGD 616
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVL 448
+HP + IY L+EI +LK GY + L + ++ K ALS HSEKLAIAFG++
Sbjct: 617 NTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLV 676
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
P IRV KNLRIC DCH FAK++S VY+R++++RDR RFHHFR+G CSC DYW
Sbjct: 677 TLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 186/399 (46%), Gaps = 43/399 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK--RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RAY+ SS P + F +F + K +P N F F IK + + G +H ++
Sbjct: 96 LIRAYASSSDPFQSFVIFLDLLDKCEDLP-NKFTFPFVIKAASELKASRVGTAVHGMAIK 154
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ +D ++ +L+ Y A +LF I +D V+WN +IS + + DAL L
Sbjct: 155 LSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALEL 214
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + RE P+ VT + VL ACA LEFG + YI G + LCN+++ MY
Sbjct: 215 FLKMERE--NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMY 272
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA---------------------------- 210
+KCGS+ A ++F MPE+DV SW+ M+ G A
Sbjct: 273 TKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLIS 332
Query: 211 ---MNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
NG ++A+ F +Q + + PD+ T LSAC+ G +D G ++ K GI
Sbjct: 333 AYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGI 391
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ N H +VD+ + G L++A ++ S+ + D +W ++ +H G+ I+
Sbjct: 392 VLNCHLISSLVDMYAKCGSLEKALEVFYSVEER-DVYVWSAMIAGLGMHGR---GKAAID 447
Query: 327 HLIELK-AQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
E++ A+ + V N+ + V E R F +E
Sbjct: 448 LFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHE 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 163/358 (45%), Gaps = 36/358 (10%)
Query: 51 QIHARVLRDGYQLD----SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
++HAR+LR G D S+L T S+F A LFD+IPQ + WN LI Y
Sbjct: 43 EVHARMLRTGLFFDPFSASKLFTA--SALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAY 100
Query: 107 IRNQRTRDALCLF-DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ + +F D L++ E P+ T V++A + L A G +H + +G
Sbjct: 101 ASSSDPFQSFVIFLDLLDKCED--LPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + NSL+ Y CG L MA +FKG+ KDVVSW++MIS A DA+E F M
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKM 218
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+R V P+ T GVLSAC+ ++ G + + GI ++ ++D+ + G
Sbjct: 219 ERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK-GIKVDLTLCNAMLDMYTKCGS 277
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI--ELKAQESGDYVLLL 343
+D A +L M + D W +L + +G+ L+ + +E + +L+
Sbjct: 278 VDDAQKLFDEMPER-DVFSWTIMLDG-----YAKMGDYDAARLVFNAMPVKEIAAWNVLI 331
Query: 344 NLYSSVGDWEKVKELREFMNEKGL------------QTTPGCSTIG---LKGVVHEFV 386
+ Y G K KE NE L T C+ +G L G +H ++
Sbjct: 332 SAYEQNG---KPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI 386
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/506 (43%), Positives = 319/506 (63%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + S +P F ++ M K + CSF +K C + + + +QIH ++R G
Sbjct: 76 IIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIVRKG 135
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ L TTL+D+Y+ + A K+FDE+ +RD +WN LIS + + + +AL LF
Sbjct: 136 FIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFK 195
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G KP++++ L L ACA LG + GEKIH YI + +CN +I MY+K
Sbjct: 196 RM--EIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAK 253
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
CG + A+ VF+ M KD+V+W+ MI AM+G G A+E F M ++GV PDD ++
Sbjct: 254 CGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLA 313
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL AC+H GLV+EG + M ++ G+ PN+ HYG VVDLLGRAG L +AY ++ SM
Sbjct: 314 VLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTV 372
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD +W+TLLGA R H++V + E V L+E+ + GD+VLL N+Y++ W V +R
Sbjct: 373 PDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVR 432
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
E M + ++ PG S I GV+H+F D SH EIY LDEI ++K GYVAE +
Sbjct: 433 EAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETS 492
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++G E+K N L +HSEKLA+AFG+++T GT I+V KNLRIC DCH K++S +Y
Sbjct: 493 FVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIY 552
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RDR+RFH F+EG CSC DYW
Sbjct: 553 DREIIVRDRVRFHRFKEGFCSCRDYW 578
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/508 (43%), Positives = 320/508 (62%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ S EE FE+MR+ ++ P S C SL G + + +
Sbjct: 231 MISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR 290
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + +L+ L+D+Y EA LF++I ++ V+WNV+I Y ++AL LF
Sbjct: 291 GLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLF 350
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK--MNLCNSLIAM 177
+ +S P+DVT L +L ACA+LGAL+ G+ +H Y+ ++ K + L SLI M
Sbjct: 351 RRM--MQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDM 408
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG L +A +F M K + +W+AMISG AM+GH A+ F M G PDD TF
Sbjct: 409 YAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITF 468
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVL+AC H GL+ G + M +D+ + P + HYGC++DL GRAGL D+A L+ +M
Sbjct: 469 VGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNME 528
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KPD IW +LLGACRIH+ + L E V +HL EL+ + YVLL N+Y+ G WE V +
Sbjct: 529 MKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAK 588
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R +N+ ++ PGCS+I + VVHEF+V D HP+ NEIY+MLDEI+ +L+ AG+V +
Sbjct: 589 IRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPD 648
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L+++ E K LS+HSEKLAIAFG+++T PGTTIR+ KNLR+C +CH+ K++S
Sbjct: 649 TSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISK 708
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
++NRE+I RDR RFHHF++G CSC DYW
Sbjct: 709 IFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 168/351 (47%), Gaps = 36/351 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R S S SP + M N + K C K G Q+HA VL+ G
Sbjct: 99 MIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLG 158
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSF---------------------EACKLFD 89
+ ++ + T+L+++Y+ F+KS EA +LFD
Sbjct: 159 LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFD 218
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG-A 148
EIP RD V+WN +IS Y ++ R +A+ F+ + R + P+ T L VL ACA G +
Sbjct: 219 EIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK--VTPNVSTMLSVLSACAQSGSS 276
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L+ G + +I + G GS + L N LI MY KCG L A +F+ + +K+VVSW+ MI G
Sbjct: 277 LQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGG 336
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
++A+ F M ++ + P+D TF +L AC++ G +D G + K+ +
Sbjct: 337 YTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMK 396
Query: 269 N-IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
N + + ++D+ + G L A ++ M K +T W ++ +H H
Sbjct: 397 NTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLAT-WNAMISGFAMHGHT 446
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 159/389 (40%), Gaps = 72/389 (18%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
QIH+++++ G ++ L++ S A LF I + V WN +I
Sbjct: 46 QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
++ AL + ++ SG +P++ T + ++C + G+++H ++ + G
Sbjct: 106 SESPFLALEYY--VHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNA 163
Query: 169 NLCNSLIAMYSKCGSL-------------------------------GMAFEVFKGMPEK 197
+ SLI MY++ G L A E+F +P +
Sbjct: 164 FVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVR 223
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
DVVSW+AMISG A +G +A+ F M+RA V P+ T VLSAC+ G + ++
Sbjct: 224 DVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWV 283
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM--------------------- 296
+D G+ NI ++D+ + G L++A L +
Sbjct: 284 RSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCY 343
Query: 297 -------------GVKPDSTIWRTLLGACRIHKHVTLGERV---IEHLIELKAQESGDYV 340
+ P+ + ++L AC + LG+ V ++ ++ +
Sbjct: 344 KEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWT 403
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGLQT 369
L+++Y+ GD K + + MN K L T
Sbjct: 404 SLIDMYAKCGDLAVAKRIFDCMNTKSLAT 432
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/536 (41%), Positives = 327/536 (61%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIH------- 53
M+ Y+ S +E LF++M + R+ + + C K L G ++H
Sbjct: 191 MISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK 250
Query: 54 ---ARVLRDGY--------QLDSQL-------------MTTLMDLYSTFEKSFEACKLFD 89
RVL + +D+ L T ++ ++ + A FD
Sbjct: 251 IEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFD 310
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++P+RD V+W +I Y++ R ++ L LF + + + KPD+ T + +L ACAHLGAL
Sbjct: 311 KMPERDFVSWTAMIDGYLQVNRFKEVLSLFREM--QAANIKPDEFTMVSILTACAHLGAL 368
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E GE I YI ++ + N+LI MY CG++ A +F MP +D +SW+A+I GL
Sbjct: 369 ELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGL 428
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A+NG+G +A++ F M +A + PD+ T GVL AC+H G+VD+G F RM+ GI PN
Sbjct: 429 AINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPN 488
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VDLLGRAG L +A+++I +M VKP+S +W +LLGACR+H+ + E + ++
Sbjct: 489 VAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQIL 548
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ + YVLL N+Y++ WEK+ E+R+ M ++G++ TPGCS I + G VHEFV D
Sbjct: 549 ELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGD 608
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
HP+ EIY LDE++ LK AGY + + ++G EEK +A+ HSEKLAIAFG+++
Sbjct: 609 QVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLIS 668
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ PG TIR+ KNLR+CVDCH AK++S VYNREVI+RDR RFHHFR G CSC DYW
Sbjct: 669 SGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 39/372 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ YS P ++ +M ++ + + + F +K + ++ G ++H +++ G
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+ LYS + A +FD + D V WNV+IS Y R+++ +++ LFD
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFD 209
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R P +T + VL AC+ L L G+++HRY+ + L N+LI MY+
Sbjct: 210 EMERMR--VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAA 267
Query: 181 CGSL-------------------------------GMAFEVFKGMPEKDVVSWSAMISGL 209
CG + G+A F MPE+D VSW+AMI G
Sbjct: 268 CGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGY 327
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
++ + F MQ A + PD+ T +L+AC+H G ++ G + K+ I +
Sbjct: 328 LQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN-EIKID 386
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
++D+ G +++A ++ +M + D W ++ I+ + GE ++
Sbjct: 387 SFVGNALIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVIFGLAINGY---GEEALDMFS 442
Query: 330 E-LKAQESGDYV 340
+ LKA + D V
Sbjct: 443 QMLKASITPDEV 454
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 22/312 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
M+ A ++S P +P+ P ++ +K C M L QIH++ +
Sbjct: 1 MISATTLSPPP------------THLPSLPQTPPLSL---IKTCKSMAQLKQIHSQTICT 45
Query: 60 GYQLDSQLMTTLMDLYSTFE-KSFEACKL-FDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G + + ++ E E ++ FD +P + WN +I Y R A+
Sbjct: 46 GLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVS 105
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
++ + E G PD+ T +L+ A++ G ++H +I + G+ S + + N+LI +
Sbjct: 106 MYCEM--LERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHL 163
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YS G + +A VF + DVV+W+ MISG + ++++ F M+R V P T
Sbjct: 164 YSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITL 223
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VLSACS ++ G + R KD I P ++D+ G +D A + +M
Sbjct: 224 VSVLSACSKLKDLNVGKR-VHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMK 282
Query: 298 VKPDSTIWRTLL 309
+ D W ++
Sbjct: 283 SR-DVISWTAIV 293
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/537 (42%), Positives = 327/537 (60%), Gaps = 37/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + P + ++ M + + + F K C C G Q+H + G
Sbjct: 49 IIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLG 105
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW--------------------- 99
+ D+ + TLM++YS A K+FD++ + V+W
Sbjct: 106 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFR 165
Query: 100 -----------NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
N++I+ ++ + +AL LF+ + + SG K D VT +L AC HLGA
Sbjct: 166 RMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM--QLSGVKGDKVTMASLLIACTHLGA 223
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
LE G+ +H YI + + L +L+ MY+KCGS+ A VF+ MPEKDV++W+A+I G
Sbjct: 224 LELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVG 283
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LAM G G A+E F MQ + V PD TF GVL+ACSH GLV+EG+ + + M +GI P
Sbjct: 284 LAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQP 343
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+I HYGC+VD+LGRAG + +A LI +M + PD + LL ACRIH ++ + ER + L
Sbjct: 344 SIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQL 403
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
IEL + G YVLL N+YSS+ +WE K++RE M E+ ++ PGCS I + GVVHEFV
Sbjct: 404 IELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKG 463
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
DVSHP+ +EIY+ LD++ ++LK AGYV + + L ++ +EK N LS HSEKLAIAFG+L
Sbjct: 464 DVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLL 523
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+T PGT IRV KNLR+C DCH+ K +S VYNRE+I+RDR RFHHF +G CSC D+W
Sbjct: 524 STTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F++IP T N +I Y R A+ + + + G PD T + ++C
Sbjct: 34 VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQ--GLDPDRFTFPSLFKSC--- 88
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G L G+++H + ++ G+ S + N+L+ MYS CG L A +VF M K VVSW+ MI
Sbjct: 89 GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 148
Query: 207 SGLA---------------------------MNGHGRD-----AIESFGAMQRAGVFPDD 234
A +NGH D A+ F MQ +GV D
Sbjct: 149 GAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 208
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
T +L AC+H G ++ G + K+ I ++ +VD+ + G ++ A ++
Sbjct: 209 VTMASLLIACTHLGALELGKWLHVYIEKE-KIEVDVALGTALVDMYAKCGSIESAMRVFQ 267
Query: 295 SMGVKPDSTIWRTLL 309
M K D W L+
Sbjct: 268 EMPEK-DVMTWTALI 281
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/505 (41%), Positives = 310/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS++S E F +M+ + I N + C +L G QIH +R G
Sbjct: 293 IIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSG 352
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + L+++Y+ A KLF+ +P+++ VAWN +IS Y ++ +AL LF
Sbjct: 353 FESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALF- 411
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KPD + VL ACAH ALE G++IH Y G+ S + + L+ +Y+K
Sbjct: 412 -IEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAK 470
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A ++F+ MPE+DVVSW+ MI ++GHG DA+ F MQ G D FT +
Sbjct: 471 CGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAI 530
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLVD+G+ + M D+G+ P + HY C+VDLLGRAG LD+A +I +M ++P
Sbjct: 531 LTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEP 590
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ +W LLGACRIH ++ LGE+ +HL EL +G YVLL N+Y+ WE V +LR+
Sbjct: 591 DANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRK 650
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ PGCS + + V F+V D +HP+ +IY ML+ + +Q++ AGYV
Sbjct: 651 MMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNL 710
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ E K N LS HSEKLAI+FG++ T PG IR+ KNLR+C DCHN K +S +
Sbjct: 711 ALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVG 770
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHH + G CSC DYW
Sbjct: 771 REIIVRDANRFHHVKNGFCSCGDYW 795
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 178/337 (52%), Gaps = 9/337 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + P E LF +M+ I N + C +L G QIH +R G
Sbjct: 192 IIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSG 251
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ L+++Y+ A KLF+ +P RD +WN +I Y N + +AL F+
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFN 311
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KP+ +T + VL ACAHL ALE G++IH Y G+ S + N+L+ MY+K
Sbjct: 312 RM--QVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAK 369
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A+++F+ MP+K+VV+W+A+ISG + +GH +A+ F MQ G+ PD V
Sbjct: 370 CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H +++G + G N+ +VD+ + G ++ A +L M +
Sbjct: 430 LPACAHFLALEQGKQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQ 487
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
D W T++ A IH H GE + + K QE+G
Sbjct: 488 DVVSWTTMILAYGIHGH---GEDALA--LFSKMQETG 519
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 7/318 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L+ +M++ I + IK C L G ++H ++ G++ D + T L +Y+
Sbjct: 107 LYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYT 166
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A ++FD +P+RD V+WN +I+ Y +N + +AL LF + + +G KP+ T
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEM--QVNGIKPNSSTL 224
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ V+ CAHL ALE G++IH Y G S + + N L+ MY+KCG++ A ++F+ MP
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPI 284
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+DV SW+A+I G ++N +A+ F MQ G+ P+ T VL AC+H +++G
Sbjct: 285 RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQI 344
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ G N +V++ + G ++ AY+L M K + W ++ H
Sbjct: 345 HGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHG 402
Query: 317 HVTLGERVIEHLIELKAQ 334
H + IE++AQ
Sbjct: 403 H---PHEALALFIEMQAQ 417
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/506 (44%), Positives = 321/506 (63%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+R ++ S +P LF +M I + F K K + G IH+ V+R+
Sbjct: 106 MIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRN 165
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + +L+ +YS F + A ++F+ + RD VAWN +I+ + N +AL L+
Sbjct: 166 GFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G +PD T + +L AC LGAL GE++H Y+ + G + N+L+ +YS
Sbjct: 226 REMGSE--GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYS 283
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG+ A +VF M E+ VVSW+++I GLA+NG G +A++ FG ++R G+ P + TF G
Sbjct: 284 KCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVG 343
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL ACSHCG++DEG + RM +++GILP I H+GC+VDLL RAG + AY I +M V
Sbjct: 344 VLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVP 403
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P++ IWRTLLGAC IH H+ LGE + L+ + SGD+VLL NLY+S W V+ +R
Sbjct: 404 PNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVR 463
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M KG++ TPG S + LK V+EF++ D SHP+ E Y ML +I + LKI GYV
Sbjct: 464 KIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTV 523
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ L ++ EEK ALS+H+EK+AIAF ++ TPPGT IR+ KNLR+C DCH K++S V+
Sbjct: 524 NVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVF 583
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR RFHHF++G CSC DYW
Sbjct: 584 EREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 39/269 (14%)
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS--LIAMYSKCGSLGMAFEVFKG 193
C+ ++Q C + ++IH + HG + N + A+ S + A ++F
Sbjct: 37 CISLVQLCG--SSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQ 94
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFTGVLSACS------- 245
+ ++ +W+ MI G A + + A+E F M A + PD TF + A +
Sbjct: 95 IQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSL 154
Query: 246 ----HCGLVDEG---MMF----LDRMSKDFGILPNIHH------------YGCVVDLLGR 282
H +V G + F L M FG + + + V++
Sbjct: 155 GEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFAL 214
Query: 283 AGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGD 338
G+ ++A Y+ + S GV+PD +LL AC + LGERV +++++ Q
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL+LYS G++ +++ + M E+ +
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSV 303
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 316/489 (64%), Gaps = 7/489 (1%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY---ST 77
+ +K++P N F F +K C +L G +H V++ G+ + + TL+ +Y
Sbjct: 2 LERKKLP-NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 78 FEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
E E A K+FDE+ + D+V+W+ +I Y+R R+ DA+ LF + + G PD++T
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREM--QIKGVCPDEITM 118
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ VL AC LGALE G+ + Y+ + + L N+LI M++KCG + A +F+ M E
Sbjct: 119 VSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRE 178
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+++VSW+++I GLAM+G G +A+ F M R+GV PDD F G+LSACSH GLVD+G +
Sbjct: 179 RNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRY 238
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
D M KDF I+P I HYGC+VD+L RAGL+ +A + + M + P+ +WRTL+ ACR H
Sbjct: 239 FDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
+ LGE++ LI + +YVLL N+Y+ + DWEK +RE M+ KG++ PG + I
Sbjct: 299 ELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMI 358
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY 436
L ++EFV D SH + EIY+M+DE+ K++K AGY+ T L ++ E+K + L+
Sbjct: 359 ELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNR 418
Query: 437 HSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFRE 496
HSEKLAIAF +L TPPGT IR+ KNLR+C DCH+ +K +S +YNRE+++RDR RFHHF+
Sbjct: 419 HSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKN 478
Query: 497 GRCSCNDYW 505
G CSC D+W
Sbjct: 479 GLCSCRDFW 487
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + LF +M+ K + + + C +L G + + V ++
Sbjct: 86 MIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKER 145
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + +L L+D+++ +A LF + +R+ V+W +I + R +A+ +F+
Sbjct: 146 VQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFE 205
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ R SG PDDV + +L AC+H G ++ G++ + + K+ ++ M
Sbjct: 206 EMVR--SGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLC 263
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHG 215
+ G + A + + MP + + V W +I+ A HG
Sbjct: 264 RAGLVKEALKFVQEMPIDPNPVVWRTLIN--ACRAHG 298
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/509 (43%), Positives = 321/509 (63%), Gaps = 6/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y S EE F +M++ + N + C SL G I + V G
Sbjct: 230 MIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRG 289
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + QL+ L+D+YS + A KLFD + +D + WN +I Y +AL LF+
Sbjct: 290 FGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFE 349
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS----KMNLCNSLIA 176
+ RE P+DVT L VL ACA LGAL+ G+ +H YI ++ G+ ++L S+I
Sbjct: 350 VMLRE--NVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIV 407
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCG + +A +VF+ M + + SW+AMISGLAMNGH A+ F M G PDD T
Sbjct: 408 MYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDIT 467
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F GVLSAC+ G V+ G + M+KD+GI P + HYGC++DLL R+G D+A L+ +M
Sbjct: 468 FVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM 527
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++PD IW +LL ACRIH V GE V E L EL+ + SG YVLL N+Y+ G W+ V
Sbjct: 528 EMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVA 587
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R +N+KG++ PGC++I + GVVHEF+V D HP+ I++MLDE+++ L+ G+V
Sbjct: 588 KIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVP 647
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ + L+++ E K AL+ HSEKLAIAFG+++T PG+TIR+ KNLR+C +CH+ K++S
Sbjct: 648 DTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLIS 707
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++NRE+I RDR RFHHF++G CSCND W
Sbjct: 708 KIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 37/363 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA+S++ +P +LF +M + N K C K + Q+HA L+
Sbjct: 98 LIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLA 157
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSF---------------------EACKLFD 89
L + T+L+ +YS F+KS +A +LFD
Sbjct: 158 LHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFD 217
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +I+ Y+++ R +AL F + +E+ P+ T + VL AC HL +L
Sbjct: 218 EIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM--QEADVSPNQSTMVSVLSACGHLRSL 275
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G+ I ++ + G+G + L N+L+ MYSKCG +G A ++F GM +KDV+ W+ MI G
Sbjct: 276 ELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGY 335
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGI 266
+A+ F M R V P+D TF VL AC+ G +D G ++D+ K G
Sbjct: 336 CHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGN 395
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ N+ + ++ + + G ++ A Q+ SMG + ++ W ++ ++ H + E
Sbjct: 396 VNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMISGLAMNGHAERALGLFE 454
Query: 327 HLI 329
+I
Sbjct: 455 EMI 457
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 44/311 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQR--DTVAWNVLISC 105
QIH+ +++ G + L++ L + + S+ A LF I + + WN LI
Sbjct: 43 QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSY-ALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ +L LF + SG P+ T + ++CA A +++H + +
Sbjct: 102 HSLTPTPTSSLHLFSQM--LHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALH 159
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKG-------------------------------M 194
++ SLI MYS+ G L A VF +
Sbjct: 160 LHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEI 219
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
P KDVVSW+AMI+G +G +A+ F MQ A V P+ T VLSAC H ++ G
Sbjct: 220 PAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG- 278
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
++ +D G N+ +VD+ + G + A +L M K D +W T++G
Sbjct: 279 KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK-DVILWNTMIGG--- 334
Query: 315 HKHVTLGERVI 325
+ H++L E +
Sbjct: 335 YCHLSLYEEAL 345
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/505 (43%), Positives = 323/505 (63%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ S+ +++ +M + I + +K + C G IH +++ G
Sbjct: 113 MIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMG 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + T L+++Y T +A ++FDEIP R+ V+WN LI+ Y N+ R + +F
Sbjct: 173 FESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFR 232
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +G KP +VT + VL ACAHLGAL G I YI + + + +LI MY+K
Sbjct: 233 EM--QIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAK 290
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A ++FK M K+V +W+ +ISG AMNG G A+++F M PD+ TF GV
Sbjct: 291 CGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGV 350
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GLV+EG + M ++FG+ P I HYGC+VDLLGRAG LD+A QLI +M ++P
Sbjct: 351 LCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQP 410
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IWR LLGACRIH ++ LGE I+ L+EL+ +YVLL NLY+ W+KV E+RE
Sbjct: 411 DPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVRE 470
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M+ + ++ PGCS+I + VV+EFVV + P E+Y++L ++NK+LK+AGYVA+
Sbjct: 471 MMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGM 530
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+++ EEK ++L YHSEKLA+AFG+L +P G T+R+ KNLRIC DCH F K++S VY
Sbjct: 531 ASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYR 590
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++ +RDR RFHHF G CSC DYW
Sbjct: 591 RDISVRDRNRFHHFVGGACSCKDYW 615
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/535 (41%), Positives = 329/535 (61%), Gaps = 33/535 (6%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
++A + SP + LF ++RQ + + F CS ++ C+ L G +H V + G+
Sbjct: 100 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI-------------- 107
+ + L ++ LY++ + EA LF+++PQRD V WN++I+ I
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219
Query: 108 ---RNQRT--------------RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
RN R+ ++A+ LF + EE+G K ++VT + VL ACA LGAL+
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM--EEAGVKCNEVTVVAVLAACADLGALD 277
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G +IH Y + HG+ + + N+LI MY KCG L A +VF+ M E+ VVSWSAMI GLA
Sbjct: 278 LGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLA 337
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
M+G +A+ F M + G+ P+ TF G+L ACSH GL+ EG F M++D+GI+P I
Sbjct: 338 MHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQI 397
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HYGC+VDLL RAGLL +A++ I +M +KP+ +W LLGACR+HK+V + E I+HL+E
Sbjct: 398 EHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLE 457
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
L G YV+L N+Y+ G WE +R+FM ++ ++ TPG S+I + GVVHEFV +
Sbjct: 458 LDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEE 517
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLAT 450
SHP +I+Q +E+ +++++ GYV + L ++ EK +S HSEKLA+ FG++ T
Sbjct: 518 SHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNT 577
Query: 451 PPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
P T IR+ KNLRIC DCH+ K++S + NRE+++RDR RFH F + CSC DYW
Sbjct: 578 PAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 173/390 (44%), Gaps = 55/390 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFD--EIPQRDTVAWNVLISCYI 107
Q+HA++++ L S L T + L F SF A ++F E + +T WN +
Sbjct: 46 QVHAQIIKTNAPL-SILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
DA+ LF L R+ C PD TC VL+AC +L L G +H + + G+ S
Sbjct: 105 EGDSPIDAIMLFYRL-RQYDVC-PDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSN 162
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV--------------------------- 200
+ L N ++ +Y+ CG +G A +F+ MP++DVV
Sbjct: 163 LYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPE 222
Query: 201 ----SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
SW++MI+G G ++AI F M+ AGV ++ T VL+AC+ G +D GM
Sbjct: 223 RNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR- 281
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ S G N+ ++D+ + G L++A ++ M + + W ++G +H
Sbjct: 282 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS-WSAMIGGLAMHG 340
Query: 317 HVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNE--KGLQTTP-- 371
R+ + ++ + +G ++ LL+ S +G + E R F + P
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMG---LISEGRRFFASMTRDYGIIPQI 397
Query: 372 ---GC-----STIGLKGVVHEFVVDDVSHP 393
GC S GL HEF+++ P
Sbjct: 398 EHYGCMVDLLSRAGLLHEAHEFILNMPMKP 427
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E +LF KM + + N + C +L G++IH R G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++ TL+D+Y EACK+F+E+ +R V+W+ +I + R +AL LF
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+++ + G +P+ VT + +L AC+H+G + G + ++ ++G ++ ++ + S
Sbjct: 351 DMS--QVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLS 408
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A E MP K + V W A++
Sbjct: 409 RAGLLHEAHEFILNMPMKPNGVVWGALLGA 438
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/506 (43%), Positives = 319/506 (63%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+R ++ S +P LF +M I + F K K + G IH+ V+R+
Sbjct: 106 MIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRN 165
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + +L+ +YS A ++F+ + RD VAWN +I+ + N +AL L+
Sbjct: 166 GFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G +PD T + +L AC LGAL GE++H Y+ + G + N+L+ +YS
Sbjct: 226 REMGSE--GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYS 283
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG+ A +VF M E+ VVSW+++I GLA+NG G +A++ FG ++R G+ P + TF G
Sbjct: 284 KCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVG 343
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL ACSHCG++DEG + RM +++GILP I H+GC+VDLL RAG + AY I +M V
Sbjct: 344 VLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVP 403
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P++ IWRTLLGAC IH H+ LGE + L+ + SGD+VLL NLY+S W V+ +R
Sbjct: 404 PNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVR 463
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M KG++ TPG S + LK V+EF++ D SHP+ E Y ML +I + LKI GYV
Sbjct: 464 KIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTV 523
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ L ++ EEK ALS+H+EK+AIAF ++ TPPGT IR+ KNLR+C DCH K++S V+
Sbjct: 524 NVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVF 583
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR RFHHF++G CSC DYW
Sbjct: 584 EREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 39/269 (14%)
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS--LIAMYSKCGSLGMAFEVFKG 193
C+ ++Q C + ++IH + HG + N + A+ S + A ++F
Sbjct: 37 CISLVQLCG--SSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQ 94
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFTGVLSACS------- 245
+ ++ +W+ MI G A + + A+E F M A + PD TF + A +
Sbjct: 95 IQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSL 154
Query: 246 ----HCGLVDEG---MMF----LDRMSKDFGILPNIHH------------YGCVVDLLGR 282
H +V G + F L M G L + + + V++
Sbjct: 155 GEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFAL 214
Query: 283 AGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGD 338
G+ ++A Y+ + S GV+PD +LL AC + LGERV +++++ Q
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL+LYS G++ +++ + M E+ +
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSV 303
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 320/507 (63%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSS-SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RAY+ SS S + + M I N +A F +K C L G +H +++
Sbjct: 79 IIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKF 138
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + T++ +Y E A KLFDE+P+ D V W +I Y R ++ A+ L
Sbjct: 139 GFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGL 198
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + +G PDDVT + VL AC LGALE G+ I YI + + L N+L+ M+
Sbjct: 199 FRKM--QIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMF 256
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +F+ M ++ +VSW+++I GLAM+G G +A+ F M+ +G+ P+D F
Sbjct: 257 AKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFI 316
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH GLV+ G + M++ FGI+P I HYGC+VDLL RAGL+ +A + + M +
Sbjct: 317 GLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPI 376
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P+ IWRTL+ ACR+H + LGE + + LI + +YVLL N+Y + DWEK ++
Sbjct: 377 EPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKI 436
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M +KG+Q PG + I L +HEF+V D SH + NEI +M++E+ +++K AGY
Sbjct: 437 RVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTT 496
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
T ++ E+K +ALS HSEKLAIAF +L TPPG+ IR+ KNLR+C DCH+ +K +S +
Sbjct: 497 TEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKI 556
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE+++RDR RFHHFR+G+CSC D+W
Sbjct: 557 YNREIVMRDRSRFHHFRDGQCSCGDFW 583
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 310/482 (64%), Gaps = 10/482 (2%)
Query: 30 PFACSFAIKCCMKFCSLMGGLQI----HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
P SF++ ++ C++ G Q+ H ++++ G++ D L T L+D Y+ EA
Sbjct: 28 PSKTSFSL--ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEAR 85
Query: 86 KLFDEIPQRDT--VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
LFD + +R++ V WN +IS Y++ A+ +F + E KP +VT + +L AC
Sbjct: 86 NLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSEN--VKPTEVTMVSLLSAC 143
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
AHLGAL+ GE IH YI + L N+LI MY KCG+L A +VF G+ K++ W+
Sbjct: 144 AHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWN 203
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
++I GL MNG G +AI +F M++ G+ PD TF G+LS CSH GL+ G + M
Sbjct: 204 SIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGV 263
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+G+ P + HYGC+VDLLGRAG L +A +LI +M +KP+S + +LL AC+IHK LGE+
Sbjct: 264 YGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQ 323
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
V + L+EL + G+YV L NLY+S+ W+ V R+ M ++G+ TPGCS+I + +VH
Sbjct: 324 VTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVH 383
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
EFV D SHP+ +I LDEI K+LK G+V + LH++ EEK A+ YHSE++A+
Sbjct: 384 EFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAV 443
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG+++TPPG TIRV KNLR C DCH+ K++S + RE+I+RDR RFHHFR G CSCND
Sbjct: 444 AFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCND 503
Query: 504 YW 505
YW
Sbjct: 504 YW 505
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY +F++M+ + + + C +L G IH +
Sbjct: 104 MISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 163
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D L L+D+Y A +F + +++ WN +I N R +A+ F
Sbjct: 164 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 223
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE----HGYGSKMNLCNSLIA 176
+ +E G KPD VT + +L C+H G L G+ RY SE +G + ++
Sbjct: 224 VMEKE--GIKPDGVTFVGILSGCSHSGLLSAGQ---RYFSEMLGVYGLEPGVEHYGCMVD 278
Query: 177 MYSKCGSLGMAFEVFKGMPEK 197
+ + G L A E+ + MP K
Sbjct: 279 LLGRAGYLKEALELIRAMPMK 299
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/505 (42%), Positives = 316/505 (62%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +E +F+ M + R P + C + G I G
Sbjct: 243 MIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKG 302
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L T L+D+Y+ + +A +LFD + RD VAW+ +IS Y ++ R R+AL +F+
Sbjct: 303 MLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFN 362
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E P+DVT + VL ACA LGALE G+ +H YI + L +L+ Y+K
Sbjct: 363 EMQGTE--VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAK 420
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + F+ MP ++ +W+A+I G+A NG R+A+E F +M A + P D TF GV
Sbjct: 421 CGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGV 480
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH LV+EG M++D+GI P I HYGC+VDLLGRAGL+D+AYQ I +M ++P
Sbjct: 481 LLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEP 540
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +WR LL AC +HK+V +GE ++ ++ L SG+Y+LL N Y+SVG W+ +R+
Sbjct: 541 NAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRK 600
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ PGCS I L+G + EF +D HP++ EIY+ + E+ + +K+ GY+
Sbjct: 601 EMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTAD 660
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++ EK ++S+HSEKLAIAFG++ + PG TIR++KNLR+C+DCH+ K++S VYN
Sbjct: 661 ARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYN 720
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR RFHHF++G CSCNDYW
Sbjct: 721 REIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 152/313 (48%), Gaps = 11/313 (3%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R++ + PE+ +LF E + + + + +K C + C L G + A +
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ +D ++ +L+ +Y++ A LF + + +AWN +I+ Y++N ++ + +F
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E D+VT L V AC LG G+ I Y E G NL +L+ MY+
Sbjct: 261 KGM--LEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYA 318
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A +F M +DVV+WSAMISG + R+A+ F MQ V P+D T
Sbjct: 319 KCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVS 378
Query: 240 VLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
VLSAC+ G ++ G ++ R ++ +VD + G + A + SM
Sbjct: 379 VLSACAVLGALETGKWVHSYIRRKDLPLTVILGT----ALVDFYAKCGCIKDAVKAFESM 434
Query: 297 GVKPDSTIWRTLL 309
V+ ++ W L+
Sbjct: 435 PVR-NTWTWTALI 446
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
P R ++N+LI ++R DAL LF + +++ PD T +++C+ + L
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEM-LDDTAVSPDQHTVANTVKSCSRMCDLSV 189
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G + Y + G+ + NSLI MY+ CG + A +F + K V++W+AMI+G
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVK 249
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
NG ++ +E F M D+ T V +AC G + G ++ +++ G+L + +
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLG-QWIAEYAEEKGMLRSRN 308
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+VD+ + G LD+A +L M + D W ++
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSR-DVVAWSAMIS 346
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/542 (42%), Positives = 336/542 (61%), Gaps = 40/542 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT--NPFACSFAIKCCMKFCSLMG-GLQIHARVL 57
M++AYS + S +E YLF +M PT + + +F C + +L G G +H V+
Sbjct: 125 MIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVV 184
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT--------------------- 96
+DGY+ D + +L+++YS F + +A ++FDE+PQRD
Sbjct: 185 KDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARE 244
Query: 97 ----------VAWNVLISCYIRNQRTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAH 145
V+W V+++ Y+ ++ +AL C D L +E KP++ + +L ACAH
Sbjct: 245 LFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE--VKPNEAVLVSILSACAH 302
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G+ IH YI ++ N+ +LI MY+KCG + A VF G+ ++D+++W++M
Sbjct: 303 LGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSM 362
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
ISGL+M+G G + + +F M G PDD T GVL+ CSH GLV+EG+ M +G
Sbjct: 363 ISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWG 422
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P + HYGC++DLLGRAG L+ A++ I SM ++PD WR LL ACRIH V LGER+I
Sbjct: 423 IVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERII 482
Query: 326 EHLIEL-KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
H+ EL G YVLL NLY+S+G WE V ++R+ M+++G + PGCS I + GVVHE
Sbjct: 483 NHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHE 542
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
F+ D HPRI+EI + L+E+ +++ I GYV L +L E+K A+S+HSEKLA+
Sbjct: 543 FLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAV 602
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG+L+T G TIR+ KNLR C DCH+ K +S V+NRE+++RDR RFH FR G CSC D
Sbjct: 603 AFGLLSTQEG-TIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTD 661
Query: 504 YW 505
YW
Sbjct: 662 YW 663
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RD 95
++ K SL QIHA+V+ G ++ L+ L+ Y A +FD+ P
Sbjct: 59 VQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP 118
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE-FGEK 154
T+ WN++I Y + ++++L LF + D T V AC+ L +GE
Sbjct: 119 TIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGEN 178
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H + + GY S + + NSL+ MYS + A VF MP++DV++W++++ G AM G
Sbjct: 179 VHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGE 238
Query: 215 GRDAIESFG----------AMQRAG----------------------VFPDDQTFTGVLS 242
A E F A+ AG V P++ +LS
Sbjct: 239 LVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILS 298
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
AC+H G +D+G + K+ IL + + ++D+ + G +D A ++ + K D
Sbjct: 299 ACAHLGALDQGKWIHVYIDKN-RILLSSNISTALIDMYAKCGRIDCARRVFDGLH-KRDL 356
Query: 303 TIWRTLLGACRIH 315
W +++ +H
Sbjct: 357 LTWTSMISGLSMH 369
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 134/340 (39%), Gaps = 62/340 (18%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-KDVVSWSAMISGLAM 211
++IH + HG +L LI Y C +L A VF P + W+ MI +
Sbjct: 72 KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSK 131
Query: 212 NGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
++++ F M G D TFT V +ACS P
Sbjct: 132 TPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRH--------------------PT 171
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ YG + + ++ G + D + +L+ I + +RV +
Sbjct: 172 LRGYG------------ENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFD--- 216
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
E+ ++ + ++ Y+ G+ + +EL + M PG + + +V +
Sbjct: 217 EMPQRDVITWTSVVKGYAMRGELVRARELFDMM--------PGRNDVSWAVMVAGY---- 264
Query: 390 VSHPRINEIYQMLDEI--NKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
V H NE Q +++ + ++K + I S +LGA ++G + + +K I
Sbjct: 265 VGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRI--- 321
Query: 447 VLATPPGTTI--RVAKNLRICVDCHNFAKVLSGVYNREVI 484
+L++ T + AK RI DC +V G++ R+++
Sbjct: 322 LLSSNISTALIDMYAKCGRI--DCAR--RVFDGLHKRDLL 357
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/505 (41%), Positives = 318/505 (62%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS+S SP L+ M I N + F +K C K L G ++H+++++ G
Sbjct: 78 IIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVG 137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ L+ L+ LY+ AC +FDE+P+ D+ +W+ ++S Y +N + +AL LF
Sbjct: 138 LDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFR 197
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E D T V+ C LGAL+ G+ +H Y+ + G + L +L+ MYSK
Sbjct: 198 EMQAEN--VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSK 255
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +VF+GM E+DV +WS MI+G A++GHG A++ F AM+R+ P+ TFT V
Sbjct: 256 CGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSV 315
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV++G + M ++ I P I HYGC+VDL RAG++ A++ I +M ++P
Sbjct: 316 LSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEP 375
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WRTLLGAC+ H + LGE + +++L +YVL+ N+Y+S+G W V ++R
Sbjct: 376 NVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRS 435
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +K + G S+I + +VH+F++ D SHP +IY ML ++ ++LK G+V
Sbjct: 436 LMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVD 495
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EEK AL HSE+LAIA+G+L TP G+ IR+ KNLR+C DCH K++S VYN
Sbjct: 496 VLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYN 555
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR+RFHHFRE CSCNDYW
Sbjct: 556 REIIVRDRVRFHHFRERGCSCNDYW 580
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G + A +F ++ W+ +I G +++ AI + M G+ P+ TF VL
Sbjct: 55 GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
AC + EG ++ K G+ ++ L G +D A + M +PD
Sbjct: 115 KACCKLLRLCEGQELHSQIVK-VGLDFETPLVNGLIKLYAACGCMDYACVMFDEMP-EPD 172
Query: 302 STIWRTLLGACRIHKHVTLGERV--IEHLIELKAQE-SGDYVLLLNLYSSVGDWEKV--- 355
S W T++ + G+ V ++ E++A+ S D L ++ GD +
Sbjct: 173 SASWSTMVSG-----YAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLG 227
Query: 356 KELREFMNEKGLQ--TTPGCSTIGL 378
K + +M+++G++ G + +G+
Sbjct: 228 KWVHSYMDKEGVKIDVVLGTALVGM 252
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/538 (43%), Positives = 317/538 (58%), Gaps = 35/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A+ PEE LF++M + + N + C K G +H+ + R+
Sbjct: 208 MITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR 267
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV----------------------- 97
L ++D+Y+ +A +LFD++P++D V
Sbjct: 268 IGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFD 327
Query: 98 --------AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
AWN LIS Y + + ++AL LF L ++ KPD+VT + L ACA LGA+
Sbjct: 328 AMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTA-KPDEVTLVSTLSACAQLGAM 386
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G IH YI + G +L SLI MY KCG L A VF + KDV WSAMI+GL
Sbjct: 387 DLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGL 446
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+GHG+DAI F MQ V P+ TFT +L ACSH GLV+EG F ++M +G+LP
Sbjct: 447 AMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPG 506
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HY C+VD+LGRAGLL++A +LI M + P +++W LLGAC IH++V L E+ LI
Sbjct: 507 VKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLI 566
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ G YVLL N+Y+ G W++V LR+ M + GL+ PGCS+I + G+VHEF+V D
Sbjct: 567 ELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGD 626
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE--KGNALSYHSEKLAIAFGV 447
SHP +IY LDEI +L+ GYV S L L EE K AL HSEKLAIAFG+
Sbjct: 627 NSHPSAKKIYAKLDEIVARLETIGYVPN-KSHLLQLVEEEDVKEQALFLHSEKLAIAFGL 685
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++T IR+ KNLR+C DCH+ AK++S +Y+RE+++RDR RFHHFREG CSC DYW
Sbjct: 686 ISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 183/401 (45%), Gaps = 41/401 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RAY+ SS+P + +F +M + P P F F IK + L G H V++
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQS-PDFPDKFTFPFLIKAASELEELFTGKAFHGMVIK 164
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D ++ +L+ Y+ + ++F IP+RD V+WN +I+ +++ +AL L
Sbjct: 165 VLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALEL 224
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E KP+ +T + VL ACA EFG +H YI + G + L N+++ MY
Sbjct: 225 FQEM--ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMY 282
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA---------------------------- 210
+KCGS+ A +F MPEKD+VSW+ M+ G A
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALIS 342
Query: 211 ---MNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G ++A+E F +Q + PD+ T LSAC+ G +D G ++ K G+
Sbjct: 343 AYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGM 401
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
N H ++D+ + G L +A + S+ K D +W ++ +H H +
Sbjct: 402 KLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK-DVFVWSAMIAGLAMHGHGKDAIALFS 460
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+ E K + + V N+ + V+E R F N+ L
Sbjct: 461 KMQEDKVKPNA--VTFTNILCACSHVGLVEEGRTFFNQMEL 499
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 153/326 (46%), Gaps = 19/326 (5%)
Query: 51 QIHARVLRDGYQLD----SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
QIHA++LR G D S+L+T S F A ++FD+IP + WN LI Y
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAA--LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAY 110
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
+ +L +F + +S PD T +++A + L L G+ H + + GS
Sbjct: 111 ASSSNPHQSLLIFLRM-LHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ + NSLI Y+KCG LG+ + VF +P +DVVSW++MI+ G +A+E F M+
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
V P+ T GVLSAC+ + G + ++ I ++ ++D+ + G +
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN-RIGESLTLSNAMLDMYTKCGSV 288
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI--ELKAQESGDYVLLLN 344
+ A +L M K D W T+L + +GE I + Q+ + L++
Sbjct: 289 EDAKRLFDKMPEK-DIVSWTTMLVG-----YAKIGEYDAAQGIFDAMPNQDIAAWNALIS 342
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTT 370
Y G K KE E +E L T
Sbjct: 343 AYEQCG---KPKEALELFHELQLSKT 365
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/506 (44%), Positives = 317/506 (62%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R YS S++P + LF K + + + +K C+ + G Q+H ++ G
Sbjct: 98 MFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLG 157
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ A ++FDEI + V++N +I+ Y R+ R +AL LF
Sbjct: 158 LNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFR 217
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + KP+DVT L VL +CA LGAL+ G+ IH Y+ ++G + + +LI MY+K
Sbjct: 218 QLQARK--LKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAK 275
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF+ M +D +WSAMI AM+G G+D + F M RA V PD+ TF G+
Sbjct: 276 CGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGL 335
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLVDEG + MS+ +GI+P I HYGC+VDLLGRAGLL +AY+ I + +KP
Sbjct: 336 LYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKP 395
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WRTLL +C H ++ L ++V+ ++EL GDYV+L NL + G WE V LR+
Sbjct: 396 TPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRK 455
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG PGCS+I + VVHEF D H +++ LDE+ K+LK GYV + +
Sbjct: 456 LMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSL 515
Query: 421 ELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+H ++ EEK L YHSEKLAI+FG+L TPPGTTIRV KNLR+C DCH+ AK++S +
Sbjct: 516 VVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLI 575
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD RFHHF++G+CSC DYW
Sbjct: 576 DREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDE 90
S + C K SL QI A ++ Q D Q++T L++ + + A +LF+
Sbjct: 27 SSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEA 86
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
IPQ D V +N + Y R+ A+ LF + PDD T +L+AC A +
Sbjct: 87 IPQPDIVLFNSMFRGYSRSNAPLKAISLF--IKALNYNLLPDDYTFPSLLKACVVAKAFQ 144
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G+++H + G +C +LI MY+ C + A VF + E VVS++A+I+G A
Sbjct: 145 QGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYA 204
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+ +A+ F +Q + P+D T VLS+C+ G +D G + + K+ G+ +
Sbjct: 205 RSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKN-GLDKYV 263
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
++D+ + G LD A + SM V+ D+ W ++ A +H G+ V+ E
Sbjct: 264 KVNTALIDMYAKCGSLDGAISVFESMSVR-DTQAWSAMIVAYAMHGQ---GQDVMSMFEE 319
Query: 331 L-KAQESGDYVLLLNL 345
+ +A+ D + L L
Sbjct: 320 MARAKVQPDEITFLGL 335
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/522 (43%), Positives = 313/522 (59%), Gaps = 33/522 (6%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
+++ +M K + N F I+ C ++ G QIHA VL+ G+ D + L+ +
Sbjct: 105 IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 164
Query: 75 YSTFEKSFEACKLFDEIPQRD-------------------------------TVAWNVLI 103
Y F+ +A ++FD +PQRD +V+WN +I
Sbjct: 165 YVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMI 224
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ Y+++ R +A LFD + E D +L AC LGALE G+ IH YI + G
Sbjct: 225 AAYVQSNRLHEAFALFDRMRLE--NVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSG 282
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
L ++I MY KCG L A EVF +P+K + SW+ MI GLAM+G G AIE F
Sbjct: 283 IELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 342
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+R V PD TF VLSAC+H GLV+EG + M++ G+ P + H+GC+VDLLGRA
Sbjct: 343 EMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRA 402
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
GLL++A +LI M V PD+ + L+GACRIH + LGE++ + +IEL+ SG YVLL
Sbjct: 403 GLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLA 462
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
NLY+S G WE V ++R+ MN++G++ PG S I + V EF+ +HP+ EIY LD
Sbjct: 463 NLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLD 522
Query: 404 EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLR 463
EI + ++ GYV + LH++ EEK N L YHSEKLAIAFG+L T PG T+R++KNLR
Sbjct: 523 EILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLR 582
Query: 464 ICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IC DCH +K++S VY+RE+IIRDR RFHHFR G CSC DYW
Sbjct: 583 ICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 166/373 (44%), Gaps = 48/373 (12%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAW 99
CS M L Q H++++R G D+ M ++ + KS + A ++FD+IP D +
Sbjct: 30 CSTMAELKQYHSQIIRLGLSADNDAMGRVIK-FCAISKSGDLNYALEVFDKIPHPDAYIY 88
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N + Y+R Q R+ C+F P+ T +++AC A+E G++IH ++
Sbjct: 89 NTIFRGYLRWQLARN--CIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHV 146
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG---HGR 216
+ G+G+ N+LI MY SL A VF MP++DVVSW+++I+G + G R
Sbjct: 147 LKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAR 206
Query: 217 DAIE----------------------------SFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+ E F M+ V D +LSAC+ G
Sbjct: 207 EVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLG 266
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
+++G + K GI + V+D+ + G L++A ++ + K S+ W +
Sbjct: 267 ALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS-WNCM 324
Query: 309 LGACRIHKHVTLGERVIEHLIELK----AQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
+G +H GE IE E++ A + +V +L+ + G E+ K ++M E
Sbjct: 325 IGGLAMHGK---GEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 381
Query: 365 KGLQTTPGCSTIG 377
L PG G
Sbjct: 382 V-LGLKPGMEHFG 393
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY S+ E F LF++MR + + + F + + C +L G IH + + G
Sbjct: 223 MIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSG 282
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LDS+L TT++D+Y +A ++F+E+PQ+ +WN +I + + A+ LF
Sbjct: 283 IELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 342
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ RE PD +T + VL ACAH G +E G+ +Y++E G M ++ +
Sbjct: 343 EMEREM--VAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG 400
Query: 180 KCGSLGMAFEVFKGMP 195
+ G L A ++ MP
Sbjct: 401 RAGLLEEARKLINEMP 416
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/536 (40%), Positives = 324/536 (60%), Gaps = 37/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +++ E+ + +M + + N F S +K C + G +H++ ++ G
Sbjct: 99 IIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFS----SILKLCPIEPGKALHSQAVKLG 154
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--------------------------- 93
+ D + T L+D+Y+ A +LFD +P+
Sbjct: 155 FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 214
Query: 94 ----RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
RD V WNV+I Y +N +AL LF + + ++ KP++VT L VL AC LGAL
Sbjct: 215 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA--KPNEVTVLSVLSACGQLGAL 272
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G +H YI +G +++ +L+ MYSKCGSL A VF + +KDVV+W++MI G
Sbjct: 273 ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY 332
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G ++A++ F +M R G+ P + TF G+LSAC H G V EG ++M ++GI P
Sbjct: 333 AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 392
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+V+LLGRAG ++QAY+L+ +M ++PD +W TLLGACR+H + LGE+++E L+
Sbjct: 393 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV 452
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
+ SG Y+LL N+Y++VG+W+ V LR M + G++ PGCS+I + VHEF+
Sbjct: 453 DQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGG 512
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
++HP+ EIY ML+EIN LK GY + LH++G EK +L HSEKLAIAFG++
Sbjct: 513 LNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLIN 572
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PGTTI++ KNLR+C DCH K++S + R++++RDR RFHHF G CSC DYW
Sbjct: 573 TQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 5/146 (3%)
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+IH + HG L L Y+ G L + +F V W+A+I G A+ G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
A+ + M GV P+ TF+ +L C ++ G + K G +++
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVK-LGFDSDLYVR 162
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVK 299
++D+ R G + A QL +M K
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEK 188
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/536 (40%), Positives = 323/536 (60%), Gaps = 37/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +++ E+ + +M + + N F S +K C + G +H++ ++ G
Sbjct: 46 IIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFS----SILKLCPIEPGKALHSQAVKLG 101
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--------------------------- 93
+ D + T L+D+Y+ A +LFD +P+
Sbjct: 102 FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 161
Query: 94 ----RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
RD V WNV+I Y +N +AL LF + + ++ KP++VT L VL AC LGAL
Sbjct: 162 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA--KPNEVTVLSVLSACGQLGAL 219
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G +H YI +G +++ +L+ MYSKCGSL A VF + +KDVV+W++MI G
Sbjct: 220 ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY 279
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM G ++A++ F +M R G+ P + TF G+LSAC H G V EG ++M ++GI P
Sbjct: 280 AMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 339
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+V+LLGRAG ++QAY+L+ +M ++PD +W TLLGACR+H + LGE+++E L+
Sbjct: 340 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV 399
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
+ SG Y+LL N+Y++VG+W+ V LR M + G++ PGCS+I + VHEF+
Sbjct: 400 DQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGG 459
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
++HP+ EIY ML+EIN LK GY + LH++G EK +L HSEKLAIAFG++
Sbjct: 460 LNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLIN 519
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PGTTI++ KNLR+C DCH K++S + R++++RDR RFHHF G CSC DYW
Sbjct: 520 TQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+ G L + +F V W+A+I G A+ G A+ + M GV P+ TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+ +L C ++ G + K G +++ ++D+ R G + A QL +M
Sbjct: 79 SSILKLCP----IEPGKALHSQAVK-LGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 298 VK 299
K
Sbjct: 134 EK 135
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/536 (41%), Positives = 326/536 (60%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ ++ LF +M ++ + N + C K L GG I+ +
Sbjct: 179 MLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGI 238
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEAC-------------------------------KLFD 89
+ + L L+D+++ + EA K FD
Sbjct: 239 VERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFD 298
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+IP+RD V+W +I Y+R R +AL LF + + S KPD+ T + +L ACAHLGAL
Sbjct: 299 QIPERDYVSWTAMIDGYLRMNRFIEALALFREM--QMSNVKPDEFTMVSILTACAHLGAL 356
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E GE + YI ++ + + N+LI MY KCG++G A +VFK M KD +W+AMI GL
Sbjct: 357 ELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGL 416
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A+NGHG +A+ F M A + PD+ T+ GVL AC+H G+V++G F M+ GI PN
Sbjct: 417 AINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPN 476
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VDLLGRAG L++A+++I +M VKP+S +W +LLGACR+HK+V L E + ++
Sbjct: 477 VTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQIL 536
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ + YVLL N+Y++ WE ++++R+ M E+G++ TPGCS + L G V+EFV D
Sbjct: 537 ELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGD 596
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP+ EIY L+ + + L AGY + + +LG E+K AL HSEKLAIA+ +++
Sbjct: 597 QSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALIS 656
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ PG TIR+ KNLR+CVDCH+ AK++S YNRE+I+RD+ RFHHFR G CSCN++W
Sbjct: 657 SGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 166/361 (45%), Gaps = 35/361 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ YS + P+ G ++ M I + F F +K + +L G + ++ G
Sbjct: 78 MIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHG 137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + ++S A K+FD + V WN+++S Y R ++ + + LF
Sbjct: 138 FDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLF- 196
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E+ G P+ VT +L+L AC+ L LE G+ I++YI+ + L N LI M++
Sbjct: 197 -IEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAA 255
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLA--------------------------MNGH 214
CG + A VF M +DV+SW+++++G A ++G+
Sbjct: 256 CGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGY 315
Query: 215 GR-----DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
R +A+ F MQ + V PD+ T +L+AC+H G ++ G + K+ I +
Sbjct: 316 LRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN-SIKND 374
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
++D+ + G + +A ++ M K D W ++ I+ H + ++I
Sbjct: 375 TFVGNALIDMYFKCGNVGKAKKVFKEMHHK-DKFTWTAMIVGLAINGHGEEALAMFSNMI 433
Query: 330 E 330
E
Sbjct: 434 E 434
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 8/283 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFE--KSFEACKLFDEIPQRDTVAWNVLISCYIR 108
QIH+ ++ G D ++ E K A ++FD IPQ WN +I Y R
Sbjct: 25 QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSR 84
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
++ + ++ L S KPD T +L+ AL++G+ + + +HG+ S +
Sbjct: 85 INHPQNGVSMY--LLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNL 142
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ + I M+S C + +A +VF +VV+W+ M+SG + + F M++
Sbjct: 143 FVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKR 202
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP-NIHHYGCVVDLLGRAGLLD 287
GV P+ T +LSACS ++ G ++ GI+ N+ ++D+ G +D
Sbjct: 203 GVSPNSVTLVLMLSACSKLKDLEGGKHIYKYING--GIVERNLILENVLIDMFAACGEMD 260
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
+A + +M + D W +++ + L + + + E
Sbjct: 261 EAQSVFDNMKNR-DVISWTSIVTGFANIGQIDLARKYFDQIPE 302
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 8/228 (3%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEVFKGMPE 196
+L+ C + L+ +IH + + G S +IA + G + A +VF +P+
Sbjct: 13 LLEKCKSMYQLK---QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQ 69
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+ W+ MI G + H ++ + + M + + PD TF +L + + G +
Sbjct: 70 PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVL 129
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL-GACRIH 315
L+ K G N+ + + L+D A + + MG + W +L G R+
Sbjct: 130 LNHAVKH-GFDSNLFVQKAFIHMFSLCRLVDLARK-VFDMGDAWEVVTWNIMLSGYNRVK 187
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ IE + S VL+L+ S + D E K + +++N
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYIN 235
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/506 (43%), Positives = 319/506 (63%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R Y+ + +P F LF ++ + + + +K C +L G Q+H ++ G
Sbjct: 92 MARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ + A ++FD+I + V +N +I+ Y R R +AL LF
Sbjct: 152 LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + KP DVT L VL +CA LGAL+ G+ +H Y+ ++G+ + + +LI MY+K
Sbjct: 212 EL--QARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAK 269
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF+ M +D +WSAMI A++GHG A+ F M++AG PD+ TF G+
Sbjct: 270 CGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGL 329
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV+EG + M +G++P I HYGC+VDLLGRAG L++AY+ I + ++P
Sbjct: 330 LYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRP 389
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WRTLL AC H +V LG+RVIE + EL GDY++L NL + G WE V +R+
Sbjct: 390 TPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRK 449
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
MNE+G+ PGCS++ + VVHEF D H +++Q LDE+ K+LK+ GYV +
Sbjct: 450 LMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSL 509
Query: 421 ELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
H ++ EEK L YHSEKLAI FG+L TPPGTTIRV KNLR+C DCH+ AK++S ++
Sbjct: 510 VFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIF 569
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+R++I+RD RFHHF++G+CSC DYW
Sbjct: 570 DRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 146/316 (46%), Gaps = 11/316 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
Q+ A ++ D ++T ++ L T A LFD+IPQ D V +N + Y
Sbjct: 38 QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYA 97
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R A LF + SG PDD T +L+ACA ALE G ++H + G
Sbjct: 98 RTDTPLRAFTLFTQI--LFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSEN 155
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ +C +LI MY+ C + A VF + E VV+++AMI+G A +A+ F +Q
Sbjct: 156 VYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQA 215
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+ P D T VLS+C+ G +D G + + K+ G + ++D+ + G LD
Sbjct: 216 RNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKN-GFNRFVKVDTALIDMYAKCGSLD 274
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLY 346
A + +M V+ D+ W ++ A IH H G + + E+ KA D + L L
Sbjct: 275 DAVCVFENMAVR-DTQAWSAMIMAYAIHGH---GLKAVSLFKEMRKAGTEPDEITFLGLL 330
Query: 347 SSVGDWEKVKELREFM 362
+ V+E E+
Sbjct: 331 YACSHTGLVEEGFEYF 346
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 137 LLVLQACAHLGALE----FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
L +L C L L+ F K H + +N C ++ S+ A +F
Sbjct: 24 LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFC----SLNPTTTSMQHAHHLFD 79
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+P+ D+V ++ M G A A F + +G+FPDD TF +L AC+ C ++E
Sbjct: 80 QIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE 139
Query: 253 G 253
G
Sbjct: 140 G 140
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/513 (40%), Positives = 318/513 (61%), Gaps = 12/513 (2%)
Query: 1 MVRAYSMSSSPEEGFYL-----FEKMRQKRIPTNPFACSFAIKCCMKFC-SLMGGLQIHA 54
++RA++ +SP L F M + + N F F +K C S GLQ HA
Sbjct: 94 LIRAHA--TSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHA 151
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
L+ G+ D + TL+ +YS F F +A +FD +P+ V W+ +I Y+R +
Sbjct: 152 AALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLS 211
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
DA+ LF + + +G + D+VT + VL A LGALE + R++ G G + LCN
Sbjct: 212 SDAVDLFREM--QANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCN 269
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+LI +KCG + A VF+GM ++ VVSW+++I LAM G G++A+ F M+ AGV P
Sbjct: 270 ALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPP 329
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
DD F GVL+ACSH G+VDEG + D M ++GI P I HYGC+VD+ GRAG++++A +
Sbjct: 330 DDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEF 389
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
+ +M ++P+ IWR+L+ ACR H + LGE + L+ +Y++L N+++ W
Sbjct: 390 VRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRW 449
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
++ E+R M+++G++ PGCS + L G VHEF+ D SHP+ +IY+M++E+ ++L+
Sbjct: 450 KEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRV 509
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
G++A + L +L E+K AL +HSEKLAIAF +L TPPGT +RV KNLR+C DCH
Sbjct: 510 GHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAI 569
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S VY RE+++RDR RFH F++G CSC D+W
Sbjct: 570 KCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 319/511 (62%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSSSPE---EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG-GLQIHARV 56
++RA++ S P F M + + N F F +K C G GLQ HA
Sbjct: 99 LIRAHAASPLPSARLRAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGFPGVGLQAHAAA 158
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
L+ G+ D + TL+ +YS F F +A +FD + + V W+ +I Y+R + D
Sbjct: 159 LKFGFATDQYVSNTLIHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSD 218
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ LF + + SG +PD+VT + VL A A LGALE + R++ G G + LCN+L
Sbjct: 219 AVGLFREM--QASGVRPDEVTVIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNAL 276
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I +KCG + A VF+GM E+ VVSW+++I LAM G G++A+ F AM+ AGV PDD
Sbjct: 277 IDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDD 336
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
F GVL+ACSH G+VDEG + D M ++GI P I HYGC+VD+ GRAG++++A + I
Sbjct: 337 VVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIH 396
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+M +KP+ IWRTL+ ACR H + LGE + +L+ +YV+L N+Y+ W++
Sbjct: 397 TMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKE 456
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
E+R M+++G++ PGCS + L G VHEF+ D SHP+ EIY M++E+ ++LK G+
Sbjct: 457 KSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELKHVGH 516
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
++ + L +L E+K AL +HSEKLAIAF +L TPPGT +RV KNLR+C DCH K
Sbjct: 517 ISATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKC 576
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S VYNRE+I+RDR RFH F+ G CSCND+W
Sbjct: 577 ISLVYNREIIVRDRSRFHRFKNGSCSCNDFW 607
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 322/508 (63%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMS-SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RAYS + S F + M + + N F F +K C SL G +H V++
Sbjct: 95 LIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKF 154
Query: 60 GYQLDSQLMTTLMDLYSTF-EKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G++ D ++ TL+ +Y E FE A K+FD+ P+ DTV W+ +I+ ++R + A+
Sbjct: 155 GFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVD 214
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + + G PD++T + VL ACA LGALE G+ + Y+ + + LCN+LI M
Sbjct: 215 LFREM--QVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDM 272
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
++KCG++ A ++F+ M + +VSW+++I+GLAM+G G DA+ F M G+ PDD F
Sbjct: 273 FAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAF 332
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVLSACSH GLVD+G + M ++F I+P + HYGC+VDLL R G + +A++ + M
Sbjct: 333 IGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMP 392
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+P+ IWRT++ AC + LGE + + LI+ + +YVLL N+Y+ + WEK +
Sbjct: 393 FEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTK 452
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+RE M+ +G++ PG + I + ++EFV D SH + EIY+M+DE+ +++K AGYV
Sbjct: 453 VREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPT 512
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L ++ E+K +AL HSEKLAIAF +L TPPGT+IR+ KNLR+C DCH+ K +S
Sbjct: 513 TSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISK 572
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
VYNRE+++RDR RFHHF+ G CSC D+W
Sbjct: 573 VYNREIVVRDRNRFHHFKNGLCSCRDFW 600
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/513 (40%), Positives = 318/513 (61%), Gaps = 12/513 (2%)
Query: 1 MVRAYSMSSSPEEGFYL-----FEKMRQKRIPTNPFACSFAIKCCMKFC-SLMGGLQIHA 54
++RA++ +SP L F M + + N F F +K C S GLQ HA
Sbjct: 94 LIRAHA--TSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHA 151
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
L+ G+ D + TL+ +YS F F +A +FD +P+ V W+ +I Y+R +
Sbjct: 152 AALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLS 211
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
DA+ LF + + +G + D+VT + VL A LGALE + R++ G G + LCN
Sbjct: 212 SDAVELFREM--QANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCN 269
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+LI +KCG + A VF+GM ++ VVSW+++I LAM G G++A+ F M+ AGV P
Sbjct: 270 ALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPP 329
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
DD F GVL+ACSH G+VDEG + D M ++GI P I HYGC+VD+ GRAG++++A +
Sbjct: 330 DDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEF 389
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
+ +M ++P+ IWR+L+ ACR H + LGE + L+ +Y++L N+++ W
Sbjct: 390 VRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRW 449
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
++ E+R M+++G++ PGCS + L G VHEF+ D SHP+ +IY+M++E+ ++L+
Sbjct: 450 KEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRV 509
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
G++A + L +L E+K AL +HSEKLAIAF +L TPPGT +RV KNLR+C DCH
Sbjct: 510 GHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAI 569
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S VY RE+++RDR RFH F++G CSC D+W
Sbjct: 570 KCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/507 (44%), Positives = 320/507 (63%), Gaps = 5/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R Y+ S+SP F LF ++ + + + S +K C +L G+ +H ++ G
Sbjct: 101 MARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG 160
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ A +FDE+ Q V++N +I+ Y R+ + +AL LF
Sbjct: 161 LNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFR 220
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + S +P DVT L V+ +CA LGAL+ G+ IH Y+ + G+ + + +LI M++K
Sbjct: 221 EL--QASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAK 278
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F+GM +D +WSAMI A +G G AI F M+R GV PD+ TF G+
Sbjct: 279 CGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGL 338
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV++G + MSK +GI P I HYGC+VDLLGRAG LD+AY + + +K
Sbjct: 339 LYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKA 398
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WRTLL AC H +V + +RVIE + EL GDYV+L NLY+ VG WE V LR+
Sbjct: 399 TPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRK 458
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PGCS++ + VVHEF D H E+ + LDE+ K++K+ GYV + TS
Sbjct: 459 LMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPD-TS 517
Query: 421 ELHNLGAEEKGN--ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+++ EE+G L YHSEKLA+AFG+L TPPGTTIRVAKNLRIC DCHN AK++S +
Sbjct: 518 LVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFI 577
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R+++IRD RFH F +G+CSC D+W
Sbjct: 578 FGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 13/333 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
QI A ++ Q D ++T L++ L T A LFD+I +D + +N++ Y
Sbjct: 47 QIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYA 106
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R+ A LF L SG PDD T +L+ACA AL G +H + + G
Sbjct: 107 RSNSPYLAFSLFGEL--LCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHN 164
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ +C +LI MY++C + A VF M + +VS++A+I+G A + +A+ F +Q
Sbjct: 165 IYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQA 224
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+ + P D T V+ +C+ G +D G + + K G + ++D+ + G L
Sbjct: 225 SNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKK-GFDKYVKVNTALIDMFAKCGSLT 283
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLY 346
A + M V+ D+ W ++ A H G + I E+K + D + L L
Sbjct: 284 DAISIFEGMRVR-DTQAWSAMIVAFATHGD---GLKAISMFEEMKREGVRPDEITFLGLL 339
Query: 347 SSVGDWEKVKELREFMN--EKGLQTTPGCSTIG 377
+ V++ R + K TPG G
Sbjct: 340 YACSHAGLVEQGRGYFYSMSKTYGITPGIKHYG 372
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI---AMYSKCGSLGMAFEVFKG 193
L +L C L L+ +I Y + S +++ LI + + A +F
Sbjct: 33 LSLLSKCTSLNELK---QIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQ 89
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ +KD++ ++ M G A + A FG + +G+ PDD TF+ +L AC+ + EG
Sbjct: 90 ILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREG 149
Query: 254 M 254
M
Sbjct: 150 M 150
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/552 (41%), Positives = 337/552 (61%), Gaps = 49/552 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHAR---- 55
++RA S S+ P + +F +M + + N F K C + L G Q+H
Sbjct: 82 LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKF 141
Query: 56 --------------------VLRDGYQL----------------------DSQLMTTLMD 73
V+ D ++L D L ++D
Sbjct: 142 GLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMID 201
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
Y + A LFDE+PQR V+WNV+I+ Y ++ ++A+ +F + E P+
Sbjct: 202 GYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAE--VPPNY 259
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
VT + VL A + LGALE G+ +H Y + G L ++LI MY+KCGS+ A +VF+G
Sbjct: 260 VTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEG 319
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+P+++VV+WS +I+GLAM+G +D ++ F M+RAGV P D T+ G+LSACSH GLV+EG
Sbjct: 320 LPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEG 379
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
F D M + G+ P I HYGC+VDLLGRAGLL+++ +LI +M +KPD IW+ LLGAC+
Sbjct: 380 RWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACK 439
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+H +V +G+RV EHL+EL +SG YV L N+Y+S+G+WE V ++R M E ++ PGC
Sbjct: 440 MHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGC 499
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S I L GV+HEF+V+D SHP+ +I+ ML E+++ L + GY T L N+ E+K ++
Sbjct: 500 SWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESS 559
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L+YHSEK+AIAFG+++T P T +R+ KNLRIC DCH+ K++S +Y R++I+RDR RFHH
Sbjct: 560 LNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHH 619
Query: 494 FREGRCSCNDYW 505
F G CSC DYW
Sbjct: 620 FVNGSCSCMDYW 631
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 56/323 (17%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAW 99
C M L Q+HA++++ Q+ L + +S + A K+F + + + ++
Sbjct: 21 CKTMQDLKQLHAQMIKTA-QIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSY 79
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N LI + DAL +F + E+ +P+ T V +AC L G ++H
Sbjct: 80 NTLIRALSESNDPCDALLVFIEM-VEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLA 138
Query: 160 SEHGYGSKMNLCNSLIAMYSKC-------------------------------------- 181
+ G S + ++++ MY C
Sbjct: 139 VKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNV 198
Query: 182 --------GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
G L +A +F MP++ VVSW+ MI+G A +GH ++A+E F MQ A V P+
Sbjct: 199 MIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPN 258
Query: 234 DQTFTGVLSACSHCGLVDEG-MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
T VL A S G ++ G + L + + G+ + ++D+ + G +++A Q+
Sbjct: 259 YVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--SALIDMYAKCGSIEKALQV 316
Query: 293 ITSMGVKPDSTIWRTLLGACRIH 315
+ K + W T++ +H
Sbjct: 317 FEGLP-KRNVVTWSTIIAGLAMH 338
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/506 (43%), Positives = 315/506 (62%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R Y+ P L ++ + + + S +K C + +L G Q+H ++ G
Sbjct: 106 MARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLG 165
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ A ++FD+I + VA+N +I+ RN R +AL LF
Sbjct: 166 VGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFR 225
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +ESG KP DVT L+ L +CA LGAL+ G IH Y+ ++G+ + + +LI MY+K
Sbjct: 226 EL--QESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAK 283
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VFK MP +D +WSAMI A +GHG AI M++A V PD+ TF G+
Sbjct: 284 CGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGI 343
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV+EG + M+ ++GI+P+I HYGC++DLLGRAG L++A + I + +KP
Sbjct: 344 LYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKP 403
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WRTLL +C H +V + + VI+ + EL GDYV+L NL + G W+ V LR+
Sbjct: 404 TPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRK 463
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KG PGCS+I + VVHEF D H ++ LDE+ K+LK+AGYV + +
Sbjct: 464 MMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSL 523
Query: 421 ELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ ++ EEK L YHSEKLAI +G+L TPPGTTIRV KNLR+CVDCHN AK +S ++
Sbjct: 524 VFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIF 583
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF++G+CSC DYW
Sbjct: 584 GRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 12/317 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYS---TFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
QI A ++ +Q + ++T L++ + T A ++FD+IPQ D V +N + Y
Sbjct: 53 QIQAYTIK-THQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYA 111
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R A+ L + SG PDD T +L+ACA L ALE G+++H + G G
Sbjct: 112 RFDDPLRAILLCSQV--LCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDN 169
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
M +C +LI MY+ C + A VF + E VV+++A+I+ A N +A+ F +Q
Sbjct: 170 MYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQE 229
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+G+ P D T LS+C+ G +D G + + K+ G + ++D+ + G LD
Sbjct: 230 SGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN-GFDQYVKVNTALIDMYAKCGSLD 288
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLY 346
A + M + D+ W ++ A H H G + I L E+ KA+ D + L +
Sbjct: 289 DAVSVFKDMP-RRDTQAWSAMIVAYATHGH---GSQAISMLREMKKAKVQPDEITFLGIL 344
Query: 347 SSVGDWEKVKELREFMN 363
+ V+E E+ +
Sbjct: 345 YACSHTGLVEEGYEYFH 361
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/507 (43%), Positives = 322/507 (63%), Gaps = 5/507 (0%)
Query: 1 MVRAYSMSSSP-EEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+R S S +P +E LF KM ++ P N F +F +K C +L G Q+HA VL+
Sbjct: 61 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLK 120
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ + T L++ Y+ E A K+FDEI R+ VAW+ +IS Y R +AL L
Sbjct: 121 SGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGL 180
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F ++ +++G PD+VT + V+ ACA GAL+ G+ +H YI++ + + L +L+ MY
Sbjct: 181 FRDM--QKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMY 238
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A EVF MP KD +WS+MI GLA+NG DA+E F M+ A V P+ TF
Sbjct: 239 AKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFI 298
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+H GLV EG + M +FGI+P++ YGC+VDLL RA L++ A L+ +M +
Sbjct: 299 GVLSACAHSGLVSEGRRYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPI 357
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P+ IWRTLL C+ K++ E V + L+EL+ + +Y+LL NLY+S+ WEK+ ++
Sbjct: 358 SPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQV 417
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G++ PGCS+I + G+VHEFV+ D SHP E+ ++L +I+K++ G+ I
Sbjct: 418 RKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGI 477
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LHN+ EEK NAL HSE+LAIA+G+L T IR+ KNLR+C DCH K++S
Sbjct: 478 SDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAE 537
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I+RDR+RFH F G CSC D+W
Sbjct: 538 YRREIIVRDRVRFHKFVNGSCSCRDFW 564
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDL----YSTFEKSFEACKLFDEIPQRDTVAWNVLI-SC 105
QIHAR+L + S + S + A KLF +I + + +WN +I C
Sbjct: 6 QIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRGC 65
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+++ + LF + R P+ T VL+AC+ + ALE G+++H + + G+G
Sbjct: 66 SQSQTPSKEPVILFRKMVRRGYP-NPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFG 124
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + +L+ Y+KC + +A +VF + ++++V+WS MISG A G +A+ F M
Sbjct: 125 SSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDM 184
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q+AGV PD+ T V+SAC+ G +D G ++K I ++ +V++ + G
Sbjct: 185 QKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQL-IETDLELSTALVNMYAKCGC 243
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLN 344
+++A ++ +M VK D+ W +++ I+ L E +E + +A+ ++V +
Sbjct: 244 IERAKEVFDAMPVK-DTKAWSSMIVGLAIN---GLAEDALEEFFRMEEAKVKPNHVTFIG 299
Query: 345 LYSSVGDWEKVKELREF 361
+ S+ V E R +
Sbjct: 300 VLSACAHSGLVSEGRRY 316
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 316/511 (61%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSS-SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RA++ ++ S + MR+ + N F F +K C L G +HA +++
Sbjct: 197 LIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKF 256
Query: 60 GYQLDSQLMTTLMDLY-----STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
G++ D + TL+ +Y A K+FDE P +D+V W+ +I Y R +
Sbjct: 257 GFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSAR 316
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ LF + + +G PD++T + VL ACA LGALE G+ + YI + LCN+L
Sbjct: 317 AVTLFREM--QVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNAL 374
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I M++KCG + A +VF+ M + +VSW++MI GLAM+G G +A+ F M GV PDD
Sbjct: 375 IDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDD 434
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
F GVLSACSH GLVD+G + + M F I+P I HYGC+VD+L RAG +++A + +
Sbjct: 435 VAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVR 494
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+M V+P+ IWR+++ AC + LGE V + LI + +YVLL N+Y+ + WEK
Sbjct: 495 AMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEK 554
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
++RE M+ KG++ PG + I + ++EFV D SH + EIY+M++E+ +++K AGY
Sbjct: 555 KTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGY 614
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
V + L ++ E+K +AL HSEKLAIAF +L+TPPGT IR+ KNLR+C DCH+ K
Sbjct: 615 VPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKF 674
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S VYNRE+++RDR RFHHF+ G CSC D+W
Sbjct: 675 ISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/539 (41%), Positives = 327/539 (60%), Gaps = 36/539 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM---RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+RAYS SS+P + F+ + + + + + +F ++ C + + + GL +H V+
Sbjct: 80 MIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVI 139
Query: 58 RDGYQLDSQLMTTLMDLYS----------TFEKSFE-----------AC----------K 86
+ G++LD + T L+ +Y+ F+ + E AC K
Sbjct: 140 KHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARK 199
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FDE+P+RD V WN +I+ Y + R+R+AL +F + E G K ++V+ +LVL AC HL
Sbjct: 200 MFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQME--GVKLNEVSMVLVLSACTHL 257
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
L+ G +H Y+ + + L +L+ MY+KCG++ A +VF GM E++V +WS+ I
Sbjct: 258 QVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAI 317
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
GLAMNG G ++++ F M+R GV P+ TF VL CS GLV+EG D M +GI
Sbjct: 318 GGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGI 377
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P + HYG +VD+ GRAG L +A I SM ++P W LL ACR++K+ LGE
Sbjct: 378 GPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQR 437
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
++EL+ + G YVLL N+Y+ +WE V LR+ M KG++ PGCS I + G VHEF+
Sbjct: 438 KIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFI 497
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
V D SHPR +EI L+EI+K L+++GYVA L ++ EEK +ALS HSEK+AIAFG
Sbjct: 498 VGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFG 557
Query: 447 VLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+++ IRV NLRIC DCHN AK++S ++NRE+I+RDR RFHHF++G CSC DYW
Sbjct: 558 LISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 321/507 (63%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + +E LF++M + I + + C + S+ G Q+H+ + G
Sbjct: 237 MISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 296
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ +LMDLYS + AC LF+ + +D ++WN LI Y ++AL LF
Sbjct: 297 FGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG +P+DVT L +L ACAHLGA++ G IH YI + + +L SLI MY
Sbjct: 357 EMLR--SGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMY 414
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF + K + SW+AMI G AM+G A + F M++ G+ PDD TF
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFV 474
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACS G++D G M++D+ I P + HYGC++DLLG +GL +A ++I +M +
Sbjct: 475 GLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEM 534
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC+I +V LGE ++LI+++ + G YVLL N+Y++ G W +V ++
Sbjct: 535 EPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKI 594
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 655 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 714
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 178/349 (51%), Gaps = 39/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + N + F +K C K + G QIH VL+ G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 YQLDSQLMTTLMDLY----------STFEKSF---------------------EACKLFD 89
Y LD + T+L+ +Y F++S A KLFD
Sbjct: 165 YDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFD 224
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y ++AL LF + + + +PD+ T + V+ ACA G++
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK--TNIRPDESTMVTVVSACAQSGSI 282
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + NSL+ +YSKCG L A +F+G+ KDV+SW+ +I G
Sbjct: 283 ELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGY 342
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+H G +D G +++D+ K
Sbjct: 343 THMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATN 402
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++ ++D+ + G ++ A+Q+ S+ K S+ W ++ +H
Sbjct: 403 ASSLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMH 448
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A VF+ + E +++ W+ M G A++ A++ + M G+ P+ TF +L +
Sbjct: 84 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 143
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+ EG + K G ++ + ++ + + G L+ A ++ + D
Sbjct: 144 CAKSKAFKEGQQIHGHVLK-LGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHR-DVV 201
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ L+ ++ +++ + E+ ++ + +++ Y+ G++++ EL + M
Sbjct: 202 SYTALIKGYASRGYIESAQKLFD---EIPVKDVVSWNAMISGYAETGNYKEALELFKEMM 258
Query: 364 EKGLQTTPGCSTI 376
+ ++ P ST+
Sbjct: 259 KTNIR--PDESTM 269
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/505 (43%), Positives = 313/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + +E LF K+ + RI + + C + +L G I ++ G
Sbjct: 193 MLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKG 252
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ L T+L+D+Y+ + A KLFDE+ +RD VAW+ +IS Y + R ++AL LF
Sbjct: 253 LRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFH 312
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ P++VT + VL +CA LGA E G+ +H YI + + L LI Y+K
Sbjct: 313 EM--QKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + + EVFK M K+V +W+A+I GLA NG G+ A+E F +M V P+D TF GV
Sbjct: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGV 430
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH LVD+G + M +DF I P I HYGC+VD+LGRAG L++AYQ I +M P
Sbjct: 431 LSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPP 490
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +WRTLL +CR HK++ + E+ +EH+ L+ SGDY+LL N Y+ VG E +R
Sbjct: 491 NAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRS 550
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ EK ++ PGCS I L GVVHEF +D H EI+ LD++ KQ+K GYV
Sbjct: 551 LIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDD 610
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
E K ++S+HSEKLAIA+G++ T P TTIR++KNLR+C DCHN K +S V+
Sbjct: 611 ARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFE 670
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RDR RFHHF++G CSCNDYW
Sbjct: 671 RMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R + SP+ LF+KM +K + + F S +K C + +L G Q+HA +L+ G
Sbjct: 92 MIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSG 151
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + TL+ +Y+ + A +FD +P+R VAWN ++S Y +N + + LF
Sbjct: 152 FKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFR 211
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E + DDVT + VL AC L LE GE I YI G L SLI MY+K
Sbjct: 212 KI--LELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAK 269
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A ++F M ++DVV+WSAMISG A ++A+ F MQ+ V+P++ T V
Sbjct: 270 CGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSV 329
Query: 241 LSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
L +C+ G + G ++ + + ++D + G +D++ ++ M
Sbjct: 330 LYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ----LIDFYAKCGYIDRSVEVFKEMS 385
Query: 298 VKPDSTIWRTLL 309
K T W L+
Sbjct: 386 FKNVFT-WTALI 396
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 25 RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD-----LYSTFE 79
+ P NP S ++ C L Q+HA +L+ LD + +++ L T +
Sbjct: 18 QFPENP--KSLILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALLLPDTID 72
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A +F+ I + ++ A+NV+I + +AL LF ++ E + D T V
Sbjct: 73 Y---ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMH--EKSVQHDKFTFSSV 127
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L+AC+ + AL GE++H I + G+ S + N+LI MY+ CG +G+A VF GMPE+ +
Sbjct: 128 LKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSI 187
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
V+W++M+SG NG + ++ F + + DD T VL AC ++ G + +
Sbjct: 188 VAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEY 247
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ G+ N ++D+ + G +D A +L M K D W ++
Sbjct: 248 IVSK-GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMIS 296
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 324/539 (60%), Gaps = 37/539 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+RA+S SS+P F+ + ++ + + + +F ++ + + G +H ++
Sbjct: 80 MIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVK 139
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEAC--------------------------------K 86
G++ D + + L+ +Y+ +AC K
Sbjct: 140 YGFEYDPHVQSGLIYMYAEL-GGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARK 198
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD++ +D +AWN +IS Y++ ++R+AL LF+ + RE G K ++V+ + VL AC+HL
Sbjct: 199 LFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQRE--GVKVNEVSMVSVLSACSHL 256
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GAL+ G H YI + + L +LI MY+KCG++ A EVF GM EK+V +WS+ I
Sbjct: 257 GALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAI 316
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
GLAMNG G +E F M++ V P++ TF VL CS GLV+EG + MSK +GI
Sbjct: 317 GGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGI 376
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P + HYGC+VDL GRAG LD+A I SM V+P W LL AC+I++++ +GE
Sbjct: 377 EPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASR 436
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
++EL+A+ G YVLL N+Y+ DW++V +R+ MN KG++ PGCS I + G VHEF
Sbjct: 437 KIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFF 496
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
V D SHPR EI ML EI+++LK++GYVA ++ EEK +AL HSEK+AIAFG
Sbjct: 497 VGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFG 556
Query: 447 VLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+++ P IR+ KNLR+C DCH+ K++S +NRE+++RDR RFHHFR+G CSC YW
Sbjct: 557 LISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 53/326 (16%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTVAWNVLISCYIR 108
QIH ++L +G D QL+ + + + + ++ D +N +I + +
Sbjct: 27 QIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMIRAHSK 86
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + + + PD+ T +++ A L A G +H ++G+
Sbjct: 87 SSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDP 146
Query: 169 NLCNSLIAMYS-------------------------------KCGSLGMAFEVFKGMPEK 197
++ + LI MY+ K G +G A ++F M K
Sbjct: 147 HVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHK 206
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM--- 254
D ++W+AMISG G R+A+ F MQR GV ++ + VLSACSH G +D+G
Sbjct: 207 DPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAH 266
Query: 255 MFLD----RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+++ RM+ G ++D+ + G +++A ++ M K T W + +G
Sbjct: 267 AYIERNKLRMTLTLGT--------ALIDMYAKCGNMNKAMEVFWGMKEKNVYT-WSSAIG 317
Query: 311 ACRIHKHVTLGERVIEHLIELKAQES 336
++ GE+ +E L L Q+S
Sbjct: 318 GLAMN---GAGEKCLE-LFSLMKQDS 339
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/498 (42%), Positives = 308/498 (61%), Gaps = 2/498 (0%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S+ EEG LF +M+++ I N I C +L G Q+HA +LR+G+ + L
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T L+D+Y A LFD RD + W ++S Y + A LFD + S
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM--RTS 393
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G +P VT + +L CA GAL+ G+ +H YI + L +L+ MY+KCG + A
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+F +D+ W+A+I+G AM+G+G +A++ F M+R GV P+D TF G+L ACSH
Sbjct: 454 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 513
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GLV EG ++M FG++P I HYGC+VDLLGRAGLLD+A+++I SM +KP++ +W
Sbjct: 514 GLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 573
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
L+ ACR+HK+ LGE L+E++ + G VL+ N+Y++ W +R+ M G+
Sbjct: 574 LVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 633
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PG S I + G VHEF++ D SHP+I I +ML E+ ++L AGYV + ++ L N+
Sbjct: 634 KKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 693
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
EEK AL+YHSEKLA+AFG+++T P T IR+ KNLR+C DCH K+LS +Y R +I+RD
Sbjct: 694 EEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRD 753
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHFREG CSC DYW
Sbjct: 754 RNRFHHFREGYCSCGDYW 771
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 44/360 (12%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
F +K C + G +IH VL+ G D + LM +Y A +FD+
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+ +RD V+W+ +I RN+ AL L +N + +P +V + ++ A +
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ--VRPSEVAMVSMVNLFADTANMR 212
Query: 151 FGEKIHRYISEHGYGSKMNL--CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
G+ +H Y+ + M + +L+ MY+KCG LG+A ++F G+ +K VVSW+AMI+G
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
+ + + F MQ +FP++ T ++ C G + G + ++ G
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN-GFSV 331
Query: 269 NIHHYGCVVDLLGR-------------------------------AGLLDQAYQLITSM- 296
++ +VD+ G+ A +DQA+ L M
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 297 --GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGD 351
GV+P +LL C + + LG+ V H K + D +L L+++Y+ GD
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWV--HSYIDKERVEVDCILNTALVDMYAKCGD 449
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/543 (43%), Positives = 318/543 (58%), Gaps = 40/543 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY S+S E+ L++ M + + + + ++ C GG +IH VL+ G
Sbjct: 100 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWN-------------------- 100
+ D + TL+++Y+ +A KLFDE P D+V+WN
Sbjct: 160 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWK 219
Query: 101 --------------VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LIS Y +N +AL +F +N +G + D+V + VL ACAHL
Sbjct: 220 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN--ANGMRLDEVVVVSVLSACAHL 277
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS----KCGSLGMAFEVFKGMPEKDVVSW 202
++ G+ IH + G S +NL N+LI MYS KCG + A EVF GM EK V SW
Sbjct: 278 SIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSW 337
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+A+I GLA+NG +++ F M+ GV P++ TF GVL AC H GLVDEG M +
Sbjct: 338 NALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIE 397
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
GI PN+ HYGC+VDLLGRAGLL++A +LI SM + PD W LLGAC+ H +GE
Sbjct: 398 KHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGE 457
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
RV LIEL+ G +VLL N+++S GDWE V E+R M ++G+ TPGCS I GVV
Sbjct: 458 RVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVV 517
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
HEF+ D +HP IN++ ML+E+ K+LK+ GY + ++ EEK L HSEKLA
Sbjct: 518 HEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLA 577
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG+L P T IR+ KNLRIC DCH AK++S Y RE+++RDR RFH+F+EG CSC
Sbjct: 578 IAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCM 637
Query: 503 DYW 505
DYW
Sbjct: 638 DYW 640
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 157/351 (44%), Gaps = 80/351 (22%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
+ ++FD I + WN ++ YI++ AL L+ + + G PD+ T LV+QAC
Sbjct: 82 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVG--PDNYTYPLVVQAC 139
Query: 144 AHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYSKCGSLG----------------- 185
A + LEFG K IH ++ + G+ S + + N+LI MY+ CG++
Sbjct: 140 A-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 198
Query: 186 -----------------MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
A+++F M EKD+VSWSA+ISG NG +A+ F M
Sbjct: 199 NSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 258
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMS-KDFGILPN--IHHY-------GC 275
G+ D+ VLSAC+H +V G M + RM + + L N IH Y GC
Sbjct: 259 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGC 318
Query: 276 VVD-------------------LLGRA--GLLDQAYQLITSM---GVKPDSTIWRTLLGA 311
V + ++G A GL++++ + + M GV P+ + +LGA
Sbjct: 319 VENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGA 378
Query: 312 CRIHKHVTLGE-----RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
CR V G + +H IE + G V LL + + EK+ E
Sbjct: 379 CRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE 429
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/511 (42%), Positives = 317/511 (62%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFC-SLMGGLQIHARV 56
++R + S P F M + + N F F +K C S GLQ HA
Sbjct: 103 LIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQAHAAA 162
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
L+ G+ D + TL+ +YS F F +A +F+ +P+ V W+ +I Y+R + D
Sbjct: 163 LKFGFAADHYVSNTLIHMYSCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSD 222
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ LF + + SG +PD+VT + VL A A LGALE + R++ G G + LCN+L
Sbjct: 223 AVVLFRGM--QVSGVRPDEVTVIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNAL 280
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I +KCG + A VF+GM E+ VVSW+++I LAM G G++A+ F M+ GV PDD
Sbjct: 281 IDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDD 340
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
F GVL+ACSH G+VDEG + D M ++GI P I HYGC+VD+ GRAG+++Q + +
Sbjct: 341 VAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVR 400
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+M +KP+ IWRTL+ ACR H + LGE + +L+ +YV+L N+Y+ W++
Sbjct: 401 AMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKE 460
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
E+R M+++G++ PGCS + L G VHEF+ D SHP+ EIY+M++E++++L+ G+
Sbjct: 461 KSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGH 520
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+A + L +L E+K AL +HSEKLAIAF +L TPPGT +RV KNLR+C DCH K
Sbjct: 521 IAATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKC 580
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S VYNRE+++RDR RFH F++G CSC D+W
Sbjct: 581 ISQVYNREIVVRDRSRFHRFKDGSCSCKDFW 611
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 319/510 (62%), Gaps = 9/510 (1%)
Query: 1 MVRAYSMSSSPE---EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
++RA++ S P F M + N F F +K C F + G+Q HA L
Sbjct: 114 LIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACAAFPGV--GVQAHAAAL 171
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
+ G+ D + TL+ +YS F F +A +FD + + V W+ +I Y+R+ + DA
Sbjct: 172 KFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDA 231
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ LF + + SG +PD+VT + VL A A LGALE + R++ + G G + LCN+LI
Sbjct: 232 VGLFREM--QASGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALI 289
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
+KCG L A VF+GM E+ +VSW+++I LAM G G++A+ F M+ AGV PDD
Sbjct: 290 DALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDV 349
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
F GVL+ACSH G+VDEG + + M +GI P I HYGC+VD+ GRAG++++A + +
Sbjct: 350 AFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHK 409
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M +KP+ IWRTL+ ACR H + LGE + +L+ +YV+L N+Y+ W++
Sbjct: 410 MPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEK 469
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
E+R M+++G++ PGCS + L G VHEF+ D SHP+ EIY M++E+ ++L+ AG++
Sbjct: 470 SEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHI 529
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + L +L E+K AL +HSEKLAIAF +L TPPGT +RV KNLR+C DCH K +
Sbjct: 530 SATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCI 589
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S VYNRE+I+RDR RFH F+ G CSCND+W
Sbjct: 590 SLVYNREIIVRDRSRFHRFKNGSCSCNDFW 619
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/507 (42%), Positives = 319/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + +E LF+ M + + + + C + S+ G Q+H + G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLYS + AC LF+ +P +D ++WN LI Y ++AL LF
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L +L ACAHLGA++ G IH YI + G + +L SLI MY
Sbjct: 357 EMLR--SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF + K + SW+AMI G AM+G + + F M++ G+ PDD TF
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M++D+ + P + HYGC++DLLG +GL +A ++I M +
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V LGE E+LI+++ + G YVLL N+Y+S G W +V +
Sbjct: 535 EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKT 594
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 655 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 714
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 175/349 (50%), Gaps = 39/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + N + F +K C K + G QIH VL+ G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-------------------------- 94
LD + T+L+ +Y + +A K+FD+ P R
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 95 -----DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
D V+WN +IS Y ++AL LF ++ + + +PD+ T + V+ ACA G++
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK--TNVRPDESTMVTVVSACAQSGSI 282
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N+LI +YSKCG L A +F+ +P KDV+SW+ +I G
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+H G +D G +++D+ K G+
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK--GV 400
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G ++ A+Q+ S+ K S+ W ++ +H
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMH 448
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 173/377 (45%), Gaps = 60/377 (15%)
Query: 44 CSLMGGLQI-HARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAW 99
C + L+I HA++++ G + ++ L++ L FE A +F I + + + W
Sbjct: 43 CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIW 102
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N + + + AL L+ + G P+ T VL++CA A + G++IH ++
Sbjct: 103 NTMFRGHALSSDPVSALKLY--VCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF---------------KG----------- 193
+ G + + SLI+MY + G L A +VF KG
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 194 -----MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+P KDVVSW+AMISG A G+ ++A+E F M + V PD+ T V+SAC+ G
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 249 LVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
++ G +++D D G N+ ++DL + G L+ A L + K D W
Sbjct: 281 SIELGRQVHLWID----DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISW 335
Query: 306 RTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--------VGDWEKV- 355
TL+G + H+ L + + E L++ E+ + V +L++ + +G W V
Sbjct: 336 NTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 356 --KELREFMNEKGLQTT 370
K L+ N L+T+
Sbjct: 393 IDKRLKGVTNASSLRTS 409
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/506 (43%), Positives = 311/506 (61%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ ++ P E LF++M + + + N + C + L +IH +
Sbjct: 157 MIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEH 216
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ L T LMD+Y A LFD+ +++ +WN++I+ ++ + +AL LF
Sbjct: 217 GFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLF 276
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G K D VT +L AC HLGALE G+ +H YI + + L +L+ MY+
Sbjct: 277 REM--QTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYA 334
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGS+ A +VF MPEKDV++W+A+I GLAM G +A++ F M GV PD TF G
Sbjct: 335 KCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVG 394
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+ACSH G VDEG+ + MS +GI P I HYG +VD+LGRAG + +A +LI SM +
Sbjct: 395 VLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMA 454
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD + LLGACRIH ++ ER + L+E+ SG YVLL N+Y S WE+ K R
Sbjct: 455 PDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTR 514
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
E M E+G++ PGCS I + GVVHEFV D SH + +EI +ML+++ +LK AGYV + +
Sbjct: 515 ELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKS 574
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ EEK LS HSEKLAIAFG+L+T GT IRV KNLRIC DCH+ K++S +Y
Sbjct: 575 EVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLY 634
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+I+RDR RFHHF++G CSC +W
Sbjct: 635 NREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 6/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + + +E +++M + + + + K C G QIH + G
Sbjct: 59 IIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLG 115
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ TLM++YS A K+FD++ + V+W +I + + + +A+ LFD
Sbjct: 116 FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFD 175
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + E+ KP++VT + VL ACA L ++IH YI EHG+G + L L+ +Y K
Sbjct: 176 RMMKSEN-VKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCK 234
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A ++F EK++ SW+ MI+G + + +A+ F MQ G+ D T +
Sbjct: 235 CGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASL 294
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H G ++ G +L K I ++ +VD+ + G ++ A Q+ M K
Sbjct: 295 LLACTHLGALELG-KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK- 352
Query: 301 DSTIWRTLL 309
D W L+
Sbjct: 353 DVMTWTALI 361
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEK-SFEACKL-FDEIPQRDTVAWNVLISCYIR 108
QIHA++LR G D + ++ S E S + +L F +IP + N +I
Sbjct: 6 QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTD 65
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
++AL + + + G PD T + ++C + G++IH + ++ G+ S
Sbjct: 66 KNLHQEALLFYQEMMVQ--GLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDT 120
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
N+L+ MYS CG L A +VF M +K VVSW+ MI A +A+ F M ++
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180
Query: 229 -GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
V P++ T VL+AC+ ++D ++ IH Y
Sbjct: 181 ENVKPNEVTLVNVLTACAR--------------ARDLAMVKRIHEY 212
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/505 (43%), Positives = 314/505 (62%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y E +F ++ + + + F + C + L G IH ++ G
Sbjct: 184 IISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMG 243
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T+L+D+Y+ +A +FD +P++D V+W +I Y N ++A+ LF
Sbjct: 244 MVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFL 303
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE KPD T + VL ACA LGALE GE + + + + L +LI +Y+K
Sbjct: 304 QMQREN--VKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAK 361
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A+EVFKGM EKD V W+A+ISGLAMNG+ + + FG +++ G+ PD TF G+
Sbjct: 362 CGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGL 421
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+H GLVDEG + + M + F + P+I HYGC+VDLLGRAGLLD+A+QLI +M ++
Sbjct: 422 LCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEA 481
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LLGACRIH+ L E ++ LIEL+ SG+YVLL N+YS+ W++ ++R
Sbjct: 482 NAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRL 541
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
MNEK +Q PGCS I + G+VHEF+V D HP +IY LDE+ K++K+AGYV
Sbjct: 542 SMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDF 601
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK + L HSEKLAIAFG+++ P IRV KNLR+C DCH K++S +
Sbjct: 602 VLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITG 661
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFH FREG CSCNDYW
Sbjct: 662 REITVRDNNRFHCFREGSCSCNDYW 686
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 178/338 (52%), Gaps = 4/338 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R + ++ + MR + N F F +K C + L G++IH V++ G
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG 142
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T+L+ LY+ +A K+FD+IP ++ V+W +IS YI + R+A+ +F
Sbjct: 143 FDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFR 202
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E PD T + VL AC LG L GE IH+ I E G + + SL+ MY+K
Sbjct: 203 RL--LEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAK 260
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A VF GMPEKD+VSW AMI G A+NG ++AI+ F MQR V PD T GV
Sbjct: 261 CGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGV 320
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+ G ++ G + ++ L N ++DL + G + +A+++ M K
Sbjct: 321 LSACARLGALELGEWVSGLVDRN-EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEK- 378
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
D +W ++ ++ +V + + + +L + G+
Sbjct: 379 DRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGN 416
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 4/252 (1%)
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R G D+ L+ ++ F + LF +I Q + WN +I + N DA+
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAI- 97
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
F L R E G P++ T VL+ACA L L+ G KIH + + G+ + + SL+ +
Sbjct: 98 EFYGLMRSE-GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL 156
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG L A +VF +P+K+VVSW+A+ISG G R+AI+ F + + PD T
Sbjct: 157 YAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTI 216
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VLSAC+ G ++ G ++ + + G++ N+ +VD+ + G +++A + M
Sbjct: 217 VRVLSACTQLGDLNSG-EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275
Query: 298 VKPDSTIWRTLL 309
K D W ++
Sbjct: 276 EK-DIVSWGAMI 286
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/538 (42%), Positives = 314/538 (58%), Gaps = 35/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + SPEE LF++M+ + N + C K L G + R+G
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262
Query: 61 YQLDSQLMTTLMDLY----------STFEKSFE---------------------ACKLFD 89
++ L ++D+Y F+K E A ++FD
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P+ D AWN LIS Y +N + ++AL +F L ++ KP++VT L ACA LGA+
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKN-TKPNEVTLASTLAACAQLGAM 381
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G IH YI + G ++ SLI MYSKCG L A EVF + +DV WSAMI+GL
Sbjct: 382 DLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGL 441
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+GHGR AI+ F MQ V P+ TFT +L ACSH GLVDEG +F ++M +G++P
Sbjct: 442 AMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPG 501
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HY C+VD+LGRAG L++A +LI M + P +++W LLGACRI+ +V L E L+
Sbjct: 502 SKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLL 561
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
E + G YVLL N+Y+ G W+ V LR+ M GL+ PGCS+I + G++HEF+V D
Sbjct: 562 ETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGD 621
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE--KGNALSYHSEKLAIAFGV 447
SHP EIY LDEI ++K GYV++ S L EE K +AL+ HSEKLAIA+G+
Sbjct: 622 NSHPLSTEIYSKLDEIVARIKSTGYVSD-ESHLLQFVEEEYMKEHALNLHSEKLAIAYGL 680
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ P IR+ KNLR+C DCH+ AK++S +YNR++++RDR RFHHF G CSC DYW
Sbjct: 681 IRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 41/398 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RA++ S P +G +F +M +R P N + F IK + SL+ G IH V++
Sbjct: 101 LIRAFASSPKPIQGLLVFIQMLHESQRFP-NSYTFPFVIKAATEVSSLLAGQAIHGMVMK 159
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ D + +L+ YS+ A +F +I ++D V+WN +IS +++ +AL L
Sbjct: 160 ASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQL 219
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E + +P+ VT + VL ACA LEFG YI +G + L N+++ MY
Sbjct: 220 FKRMKMENA--RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMY 277
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA---------------------------- 210
KCGSL A +F M EKD+VSW+ MI G A
Sbjct: 278 VKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALIS 337
Query: 211 ---MNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
NG ++A+ F +Q P++ T L+AC+ G +D G ++ K GI
Sbjct: 338 SYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHVYIKKQGI 396
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
N H ++D+ + G L++A ++ S+ + D +W ++ +H H +
Sbjct: 397 KLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHGHGRAAIDLFS 455
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
+ E K + + V NL + V E R F N+
Sbjct: 456 KMQETKVKPNA--VTFTNLLCACSHSGLVDEGRLFFNQ 491
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 8/284 (2%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EAC 85
+NP I C L Q+HA +LR G D T L + S AC
Sbjct: 28 SNPSTVPILIDKCANKKHLK---QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYAC 84
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
K+FD+IP+ + WN LI + + + L +F + ES P+ T V++A
Sbjct: 85 KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQM-LHESQRFPNSYTFPFVIKAATE 143
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ +L G+ IH + + +GS + + NSLI YS G L A+ VF + EKD+VSW++M
Sbjct: 144 VSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSM 203
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
ISG G +A++ F M+ P+ T GVLSAC+ ++ G D + ++ G
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERN-G 262
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
I N+ ++D+ + G L+ A +L M K D W T++
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK-DIVSWTTMI 305
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/506 (41%), Positives = 320/506 (63%), Gaps = 4/506 (0%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+ Y+ + + +E LF+KM + + + + C + S+ G Q+H+ + G+
Sbjct: 207 ISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGF 266
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ +++ L+DLYS + AC LF + +D ++WN LI Y ++AL LF +
Sbjct: 267 GXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQD 326
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMYS 179
+ R SG KP+DVT L +L ACAHLGA++ G IH YI + G + +L SLI MY+
Sbjct: 327 MLR--SGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A +VF M + + SW+AMI G AM+G A + F M++ G+ PDD TF G
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 444
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH G++D G M++D+ ++P + HYGC++DL G +GL +A ++I +M ++
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME 504
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IW +LL AC++H +V LGE ++LI+++ + G YVLL N+Y++ W +V + R
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTR 564
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V + +
Sbjct: 565 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTS 624
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +Y
Sbjct: 625 EVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIY 684
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 685 KREIIARDRTRFHHFRDGECSCNDYW 710
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 177/349 (50%), Gaps = 39/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + N + F +K C K + G Q+H +VL+ G
Sbjct: 74 MFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFG 133
Query: 61 YQLDSQLMTTLMDLY----------STFEKSF---------------------EACKLFD 89
+ LD + T+L+ +Y +KS A K+FD
Sbjct: 134 FDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFD 193
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN IS Y ++AL LF + + + +PD+ T + VL ACA G++
Sbjct: 194 EIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK--TNVRPDESTMVTVLSACAQSGSI 251
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I++HG+G + + N+LI +YSKCG L A +F+G+ KDV+SW+ +I G
Sbjct: 252 ELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGY 311
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +LSAC+H G +D G +++D+ K G+
Sbjct: 312 THMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLK--GV 369
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G ++ A Q+ SM + S+ W ++ +H
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS-WNAMIFGFAMH 417
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 168/374 (44%), Gaps = 54/374 (14%)
Query: 44 CSLMGGLQI-HARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAW 99
C + L+I HA++++ G + ++ L++ L F+ A +FD I + + W
Sbjct: 12 CKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIW 71
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N + + + AL L+ + G P+ T +L++CA A + G+++H +
Sbjct: 72 NTMFRGHALSSDPVSALKLY--VCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQV 129
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV----------------------------- 190
+ G+ + + SLI+MY + G L A +V
Sbjct: 130 LKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAH 189
Query: 191 --FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
F +P KDVVSW+A ISG A G+ ++A+E F M + V PD+ T VLSAC+ G
Sbjct: 190 KMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSG 249
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
++ G ++ D G N+ ++DL + G L+ A L + K D W TL
Sbjct: 250 SIELGRQVHSWIN-DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWNTL 307
Query: 309 LGACRIHKHVTL-GERVIEHLIELKAQESGDYVLLLNLYSS--------VGDWEKV---K 356
+G + H+ L E ++ L++ E + V +L++ S+ +G W V K
Sbjct: 308 IGG---YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364
Query: 357 ELREFMNEKGLQTT 370
L+ N L+T+
Sbjct: 365 RLKGVTNASSLRTS 378
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/511 (43%), Positives = 312/511 (61%), Gaps = 9/511 (1%)
Query: 1 MVRAYSMSSSPEE-----GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
++R Y+ SS+P +F +M ++ + + + +K C + G Q HA
Sbjct: 99 LLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHAL 158
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
++ G + TL+++Y+ + A +F V++N +I+ +R+ R +A
Sbjct: 159 AVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEA 218
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L LF + + G KP VT + VL ACA LGALE G +H Y+ + G GS + + +LI
Sbjct: 219 LVLFREM--QGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALI 276
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCGSL A +VF+GM KD +WS MI A +G+GR+AI F M++ G+ PDD
Sbjct: 277 DMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDI 336
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF GVL ACSH GLV EG+ + D M KD GI+P I HYGCV DLL R+G L++AY+ I
Sbjct: 337 TFLGVLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDE 395
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ + P +WRTLL AC H LG+RV E +++L GDYV+ NL ++ G WE++
Sbjct: 396 LPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEM 455
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M+EKG+ PGCS+I + VHEF D HP+ E +M+DE+ QLK+ GYV
Sbjct: 456 NMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYV 515
Query: 416 AEITSELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ H +G EEK +L YHSEKLAIAFG+L T PG T+RV KNLR+C DCH+ AK+
Sbjct: 516 PNTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKL 575
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S V+NR +I+RD RFHHF EG CSC DYW
Sbjct: 576 VSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/535 (40%), Positives = 315/535 (58%), Gaps = 30/535 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R +S S PE L+++M P N + +K C + QIHA++ + G
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D + +L++ Y+ A LFD IP+ D V+WN +I Y++ + AL LF
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 121 --------------------NLNRE---------ESGCKPDDVTCLLVLQACAHLGALEF 151
++N+E S +PD+V+ L ACA LGALE
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G+ IH Y+++ L LI MY+KCG + A EVFK + +K V +W+A+ISG A
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+GHGR+AI F MQ+ G+ P+ TFT VL+ACS+ GLV+EG + M +D+ + P I
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HYGC+VDLLGRAGLLD+A + I M +KP++ IW LL ACRIHK++ LGE + E LI +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
G YV N+++ W+K E R M E+G+ PGCSTI L+G HEF+ D S
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 505
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY-HSEKLAIAFGVLAT 450
HP I +I + ++L+ GYV E+ L +L +++ A+ + HSEKLAI +G++ T
Sbjct: 506 HPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKT 565
Query: 451 PPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
PGT IR+ KNLR+C DCH K++S +Y R++++RDR RFHHFR+G+CSC DYW
Sbjct: 566 KPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 51/347 (14%)
Query: 29 NPFACSFAIK-------CCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDL-YSTFE 79
N +CSF+++ C++ CS L QIHAR+L+ G DS +T + S+
Sbjct: 2 NVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 61
Query: 80 KSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
F A +FD + DT WN++I + + +L L+ + S + T
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLC--SSAPHNAYTFP 119
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS------------------ 179
+L+AC++L A E +IH I++ GY + + NSLI Y+
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 180 -------------KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
K G + +A +F+ M EK+ +SW+ MISG ++A++ F MQ
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV-VDLLGRAGL 285
+ V PD+ + LSAC+ G +++G ++K + ++ GCV +D+ + G
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGE 297
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+++A ++ ++ K W L+ H H G I +E++
Sbjct: 298 MEEALEVFKNIK-KKSVQAWTALISGYAYHGH---GREAISKFMEMQ 340
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/509 (41%), Positives = 314/509 (61%), Gaps = 5/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ S +P E L+ M ++ +P + + F + C + ++ G + H VL++G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ L+ Y AC +FDE RD V WN++I+ ++ + A L D
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE---HGYGSKMNLCNSLIAM 177
+ + ++ +PD+VT + ++ ACA LG LE G+ +H Y E + L +L+ M
Sbjct: 202 EMTKLDN-LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDM 260
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCGS+ +A +VF+ M ++V +W+A+I GLAM+GHG DAI F M+ + PDD TF
Sbjct: 261 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 320
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+L ACSH GLVDEG+ M F I P + HYGCVVDLL RA +D A I +M
Sbjct: 321 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 380
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+K +S +W TLLGACR H L E++ +IEL+ G YV+L NLY+ V W+ +
Sbjct: 381 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 440
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI-AGYVA 416
LR+ M KG++ TPGCS I L G++H+FV D SH + +IY M++E+ +++ + G+V
Sbjct: 441 LRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVP 500
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L ++ EEK ++L HSEKLAIA G+++TP G+ IR+ KNLR+C DCH+F KV S
Sbjct: 501 GTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTS 560
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
VYNRE++ RDR RFHHF+EG CSC D+W
Sbjct: 561 KVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 136/274 (49%), Gaps = 12/274 (4%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYI 107
Q HA +LR + L + L ++ + + S + A KLF ++ D N +I Y
Sbjct: 29 QAHALLLRT-HLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R+Q +A+ L+ + E G D+ T VL ACA LGA++ G + H + ++G+GS
Sbjct: 88 RSQNPYEAVSLYYFM--VERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ + N+LI Y CGS G A +VF +DVV+W+ MI+ G A + M +
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205
Query: 228 A-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD---FGILPNIHHYGCVVDLLGRA 283
+ PD+ T ++ AC+ G ++ G FL SK+ F I ++ +VD+ +
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKELDKFEINCDLVLETALVDMYAKC 264
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
G +D A Q+ M V+ T W L+G +H H
Sbjct: 265 GSIDLALQVFRRMRVRNVFT-WNALIGGLAMHGH 297
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 324/507 (63%), Gaps = 13/507 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ ++ P + L+ +M N + +K C + G+Q+HA +++ G
Sbjct: 129 MIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHG 188
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
D ++++ + +Y++F + EA ++ D+ + D V C++ +AL +F
Sbjct: 189 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFM------EALEIF 242
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +E+ +P VL ACA+LGAL+ G IH Y + L SL+ MY+
Sbjct: 243 HQMQKEK--IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 300
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + +A+EVF+ M K+V SW+AMI GLAM+G DAI+ F M + P++ TF G
Sbjct: 301 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVG 357
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+AC+H GLV +G+ + M K++G+ P I HYGC+VDLLGRAGLL +A ++++S+ +
Sbjct: 358 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 417
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +W LLGACR H +V LGERV + L+EL+ Q SG Y LL N+Y+ G WE+V E+R
Sbjct: 418 PTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVR 477
Query: 360 EFMNEKGLQTTPGCSTIGL-KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
+ M E+G++TTPG S I L +G VH+F++ D SHP++ +IYQMLD++ ++L++ GY +
Sbjct: 478 KLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDP 537
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L ++ EEK A+ HSEKLAI FG++ T PGTTIR+ KNLR+C DCH+ K++S V
Sbjct: 538 SQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQV 597
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE+I+RDR+R+HHFR G CSC D+W
Sbjct: 598 YNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 40/283 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEK----SFEAC-KLFDEIPQRDTVAWNVLISC 105
Q HA +LR G+ DS + +L+ Y+ SFE+ ++FD + + + WN +I
Sbjct: 73 QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 132
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
I N A+ L+ + + +P+ T VL+AC+ G + G ++H ++ +HG G
Sbjct: 133 CIENNEPFKAILLYYEM--MVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG 190
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVF--KG-------MPEKDVVSWSAMISGLAMNGHGR 216
++ +S I MY+ G L A + KG MP++ G
Sbjct: 191 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDR--------------KGCFM 236
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDF-GILPNIHH 272
+A+E F MQ+ + P VLSAC++ G +D+G + R S G+L
Sbjct: 237 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT--- 293
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+VD+ + G +D A+++ M K S+ W ++G +H
Sbjct: 294 --SLVDMYAKCGRIDLAWEVFEKMSNKEVSS-WNAMIGGLAMH 333
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 6/161 (3%)
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG-----SLGMAFEVFKGMPEKDVVSW 202
+L ++ H I G+ + SL+ Y+ S + VF + + +V W
Sbjct: 67 SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLW 126
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI N AI + M A P+ T+ VL ACS G+V EG+ + K
Sbjct: 127 NCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 186
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
G+ + H + + G L +A +++ G + D+
Sbjct: 187 -HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 226
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/507 (41%), Positives = 315/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +E LF++M + + + I + S+ G Q+H+ + G
Sbjct: 166 MISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG 225
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+D YS + AC LF + +D ++WN+LI Y ++AL LF
Sbjct: 226 FGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQ 285
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L +L ACAHLGA++ G IH YI + G + +L SLI MY
Sbjct: 286 EMLR--SGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 343
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCG + A +VF M K + +W+AMI G AM+G A + F M++ + PDD TF
Sbjct: 344 SKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFV 403
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M+ ++ I P + HYGC++DLLG +GL +A ++I++M +
Sbjct: 404 GLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTM 463
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V LGE+ ++L +++ G YVLL N+Y++ G W +V +
Sbjct: 464 EPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARI 523
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 524 RGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDT 583
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T P T + + KNLR+C +CH K++S +
Sbjct: 584 SEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKI 643
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 644 YKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 169/330 (51%), Gaps = 38/330 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++S P L+ M + N + F +K C K + GLQIH VL+ G
Sbjct: 34 MFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLG 93
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACK-------------------------------LFD 89
Y+LD + T+L+ +Y E+ +A K +FD
Sbjct: 94 YELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFD 153
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y+ ++AL LF + + + +PD+ T + V+ A A G++
Sbjct: 154 EIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK--TNVRPDESTMVTVISASARSGSI 211
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I++HG+GS + + N+LI YSKCG + A +F G+ KDV+SW+ +I G
Sbjct: 212 ELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGY 271
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+H G +D G +++D+ K G+
Sbjct: 272 THLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLK--GV 329
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
++D+ + G ++ A+Q+ SM
Sbjct: 330 TNASSLRTSLIDMYSKCGDIEAAHQVFNSM 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 50/336 (14%)
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
FE A +F+ I + + + WN + + + AL L+ + G P+ T
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLY--VCMISLGLLPNSYTFP 67
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY------------------- 178
+L++CA L A + G +IH ++ + GY + + SLI+MY
Sbjct: 68 FLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHR 127
Query: 179 ------------SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ G + A +F +P KDVVSW+AMISG G+ ++A+E F M
Sbjct: 128 DVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMM 187
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+ V PD+ T V+SA + G ++ G ++ D G N+ ++D + G +
Sbjct: 188 KTNVRPDESTMVTVISASARSGSIELGRQVHSWIA-DHGFGSNLKIVNALIDFYSKCGEM 246
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNL 345
+ A L + K D W L+G + H+ L + + E L++ ES + V +L++
Sbjct: 247 ETACGLFLGLSYK-DVISWNILIGG---YTHLNLYKEALLLFQEMLRSGESPNDVTMLSI 302
Query: 346 YSS--------VGDWEKV---KELREFMNEKGLQTT 370
+ +G W V K L+ N L+T+
Sbjct: 303 LHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 338
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 325/507 (64%), Gaps = 5/507 (0%)
Query: 1 MVRAYS-MSSSPEEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
+++ YS + + +E +LF+K+ + P N F +F +K C + GLQ+H+ VL+
Sbjct: 61 LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
DG+ + T+L++ Y E+ A K+F+E+P R+ VAW +IS + R +A+ L
Sbjct: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + +G +PD +T + V+ ACA GAL+ G +H YI ++ + + L +L+ MY
Sbjct: 181 FREMQK--AGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMY 238
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF MP KD +WS+MI G A +G +DAI++F M V PD TF
Sbjct: 239 AKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFL 298
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLSAC+H GLV G F M +FGI P++ HYGC VDLL R+GL+++AY++ T+M +
Sbjct: 299 AVLSACAHGGLVSRGRRFWSLM-LEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKI 357
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P++ WR+LL C+ K + LGE V +L+EL+ + +Y+++ NLYSS+ WEK+ EL
Sbjct: 358 PPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSEL 417
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M EK ++ PGCS+I + GVVHEFV+ D SHP + + + ++E++ +++ +GY I
Sbjct: 418 RKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSI 477
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH + EEK ALS HSE+ AIA+G+L T IRV KNLR+CVDCH K++S +
Sbjct: 478 SDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKL 537
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I+RDR+RFH F +G CSC D+W
Sbjct: 538 YEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 171/337 (50%), Gaps = 31/337 (9%)
Query: 55 RVLRDGYQLDSQLMTTLMDLYS---TFEKSFEACKL------------FDEIPQRDTVAW 99
RVLR QL + ++T + L S K C L F +IP + +W
Sbjct: 2 RVLR---QLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSW 58
Query: 100 NVLISCYIR-NQRTRDALCLFDNLNREESGCK-PDDVTCLLVLQACAHLGALEFGEKIHR 157
N LI Y + + +++ + LF L E+G P+ T VL+ACA + A G ++H
Sbjct: 59 NSLIKGYSQIHTLSKEPIFLFKKLT--ETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHS 116
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
++ + G+GS + + SL+ Y KC +G A +VF+ MP +++V+W+AMISG A G +
Sbjct: 117 HVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDE 176
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+E F MQ+AG+ PD T V+SAC+ G +D G + K F +L ++ +V
Sbjct: 177 AMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYF-VLTDLELSTALV 235
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQES 336
D+ + G +++A Q+ M VK D+T W +++ H L + I+ + L+ + +
Sbjct: 236 DMYAKCGCIERAKQVFVHMPVK-DTTAWSSMIMGFAYH---GLAQDAIDAFQQMLETEVT 291
Query: 337 GDYVLLLNLYSSVGDWEKVKELREF---MNEKGLQTT 370
D+V L + S+ V R F M E G++ +
Sbjct: 292 PDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPS 328
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 321/535 (60%), Gaps = 33/535 (6%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R+++ SP + LF ++R+ I + + CSF +K C + + G +H V + G
Sbjct: 85 LRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGL 144
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI-------------- 107
Q + L ++ LY+ + A K+FD++PQRD + WN++I+ +
Sbjct: 145 QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAE 204
Query: 108 ---RNQRT--------------RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
RN R+ ++A+ LF L E++G P++VT + VL ACA +G L
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLF--LEMEDAGLLPNEVTVVAVLVACADMGNLV 262
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G +IH + + GY + +CN+LI MY KCG L A +F M E+ VVSWSAMI+GLA
Sbjct: 263 LGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLA 322
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+G DA+ F M GV P+ TF G+L ACSH G+V++G + M++D+GI+P I
Sbjct: 323 AHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRI 382
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HYGC+VDL RAGLL +A++ I +M + P+ +W LLG C++HK++ L E HL +
Sbjct: 383 EHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSK 442
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
L G YV+L N+Y+ G WE V +R+ M ++G++ TPG S+I ++GVV+ FV D
Sbjct: 443 LDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDD 502
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLAT 450
+HP+ EI+Q +++ +++K+ GYV + L ++ ++K L HSEKLA+ FG++ T
Sbjct: 503 THPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKT 562
Query: 451 PPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
PGT IR+ KNLR+C DCH K++S V RE+++RDR RFH F+ G CSC DYW
Sbjct: 563 TPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 166/385 (43%), Gaps = 57/385 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL-FDEIPQRDTVAWNVLISCYIRN 109
Q+HA +L+ L S ++ + + F SF KL F + + WN + +
Sbjct: 33 QLHAHLLKTNSPLSSLPLSRVASV-CAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
DA+ LF L E PD TC VL+AC+ L + G+ +H Y+ + G S M
Sbjct: 92 DSPADAISLFYRL--REFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMF 149
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV----------------------------- 200
L N ++ +Y+ CG +G+A +VF MP++DV+
Sbjct: 150 LQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERN 209
Query: 201 --SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
SW++MI G A G ++AI+ F M+ AG+ P++ T VL AC+ D G + L
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACA-----DMGNLVLG 264
Query: 259 RMSKDF----GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
R DF G NI ++D+ + G L+ A ++ +M + + W ++
Sbjct: 265 RRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVS-WSAMIAGLAA 323
Query: 315 HKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP-- 371
H + +I + + ++ +L+ S +G EK ++ M + P
Sbjct: 324 HGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMT-RDYGIVPRI 382
Query: 372 ---GC-----STIGLKGVVHEFVVD 388
GC S GL HEF+++
Sbjct: 383 EHYGCMVDLFSRAGLLQEAHEFIMN 407
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ +E LF +M + N + C +L+ G +IH R G
Sbjct: 216 MIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSG 275
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + ++ TL+D+Y +AC++FD + +R V+W+ +I+ + R DAL LF+
Sbjct: 276 YEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFN 335
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ +G KP+ VT + +L AC+H+G +E G K ++ ++G ++ ++ ++S
Sbjct: 336 KM--INTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFS 393
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A E MP + V W A++ G
Sbjct: 394 RAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/463 (44%), Positives = 301/463 (65%), Gaps = 3/463 (0%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
L+G L +LR +D+ TL+ ++ + +A LFDE+P+R+ V+W+ ++
Sbjct: 138 AGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMV 197
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ Y++ R+AL +F + + G +PDD + VL ACA LGALE G+ +H Y+ +
Sbjct: 198 NGYVQAGDGREALGVFSQM--QAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANN 255
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ L +L+ MY+KCG + + EVF+GM +K+V++W+ MI GLAM+G G D++ F
Sbjct: 256 IRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFS 315
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+ +GV PDD F G L AC+H GLVD+G + M ++GI P I HYGC+VDLL R
Sbjct: 316 QMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARN 375
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
GLL +A ++ M +KPD+ IW L+ CR HK+V L E VI+H IEL+ +SG YVLL
Sbjct: 376 GLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLG 435
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+YS+ G +E+R M EKG++ TPGCS + +KGV+H+F+V D+SHPRI +I
Sbjct: 436 NIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWY 495
Query: 404 EINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNL 462
EI+ ++++ GYV + L ++ EE +ALS HSEKLAIAF +++T IR+ KNL
Sbjct: 496 EIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNL 555
Query: 463 RICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
R+C DCH+ K++S VY RE+I+RDR RFH F++G CSC DYW
Sbjct: 556 RVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + E +F +M+ + + + + C + +L G +H + +
Sbjct: 196 MVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANN 255
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ L T L+D+Y+ + ++F+ + ++ +AW +I + R D+L LF
Sbjct: 256 IRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFS 315
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYS 179
+ E SG KPDD+ + L AC H G ++ G ++ + ++ +G K+ ++ + +
Sbjct: 316 QM--ESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLA 373
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A ++ + MP K D + W A+++G
Sbjct: 374 RNGLLSEARDMVEKMPMKPDALIWGALMAG 403
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/505 (41%), Positives = 313/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY ++ EG LF KM + + N +K C +L G +HA LR+G
Sbjct: 299 MIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNG 358
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L T +D+Y A +FD +D + W+ +IS Y +N +A +F
Sbjct: 359 FTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIF- 417
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ G +P++ T + +L CA G+LE G+ IH YI + G M L S + MY+
Sbjct: 418 -VHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYAN 476
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F ++D+ W+AMISG AM+GHG A+E F M+ GV P+D TF G
Sbjct: 477 CGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGA 536
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+ EG +M +FG P + HYGC+VDLLGRAGLLD+A++LI SM ++P
Sbjct: 537 LHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRP 596
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ ++ + L AC++HK++ LGE + + L+ +SG VL+ N+Y+S W V +R
Sbjct: 597 NIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRR 656
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PG S+I + G++HEF++ D HP ++Y+M+DE+ ++L+ AGY +++
Sbjct: 657 AMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSC 716
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LHN+ E+K +AL+YHSEKLA+A+G+++T PG IR+ KNLR+C DCHN K+LS +Y
Sbjct: 717 VLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYG 776
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR RFHHF+EG CSC DYW
Sbjct: 777 REIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 173/372 (46%), Gaps = 9/372 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +Y ++ P + ++ MR + F +K C S + G ++H V+++G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ +YS A LFD+I +D V+W+ +I Y R+ +AL L
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK--MNLCNSLIAMY 178
+++ KP ++ + + A L L+ G+ +H Y+ +G K + LC +LI MY
Sbjct: 215 DMHVMR--VKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMY 272
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KC +L A VF G+ + ++SW+AMI+ + + + F M G+FP++ T
Sbjct: 273 VKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITML 332
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
++ C G ++ G + L + G ++ +D+ G+ G + A + S
Sbjct: 333 SLVKECGTAGALELGKL-LHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKS 391
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLI--ELKAQESGDYVLLLNLYSSVGDWEKVK 356
K D +W ++ + + + + H+ ++ E V LL + + G E K
Sbjct: 392 K-DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNER-TMVSLLMICAKAGSLEMGK 449
Query: 357 ELREFMNEKGLQ 368
+ +++++G++
Sbjct: 450 WIHSYIDKQGIK 461
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/537 (42%), Positives = 307/537 (57%), Gaps = 32/537 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQI-------- 52
MV + P++ LFE+MR + + N + C K +L G ++
Sbjct: 314 MVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNE 373
Query: 53 ----------------------HARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFD 89
AR L D + D TT++D Y+ + A +FD
Sbjct: 374 MMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFD 433
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P++D AWNVLIS Y ++ R ++AL +F L +SG +PD VT L L ACA LGA+
Sbjct: 434 SMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAM 493
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ GE IH YI + NL SLI MYSK G + A EVF + KDV WSAMI+GL
Sbjct: 494 DIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGL 553
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G G AIE F MQ V P+ TFT +L ACSH GLVDEG D M + +G++P
Sbjct: 554 AMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPK 613
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HY C+VD+LGRAG L++A + I M + P +++W LLGAC IH ++ L E+ L+
Sbjct: 614 TKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLL 673
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
E++ G YVLL NLY+ GDWE V ELR+ M + GL+ GCS+I + G VHEF+V D
Sbjct: 674 EIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGD 733
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVL 448
+HP +IY LDEI +L+ GYVA L + EE K AL HSEK+AIAFG++
Sbjct: 734 NAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLI 793
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IR+ KNLR+C DCH AK++S VY R++++RDR RFHHF G CSC DYW
Sbjct: 794 RADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 175/382 (45%), Gaps = 44/382 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RA + SS P + +F +M N F IK + + G +H ++
Sbjct: 210 LIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKT 269
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALC 117
+ D ++ +L+ Y++ A +F+ I +D V+WN +++ +++ AL
Sbjct: 270 SFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALD 329
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF+ + E G P+ VT + V+ ACA L G K+ YI + +N+CN+ I M
Sbjct: 330 LFERMRNE--GVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDM 387
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA-MNGHG--------------------- 215
+ KCG + +A +F M ++DVVSW+ +I G A M+ HG
Sbjct: 388 FVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLI 447
Query: 216 ---------RDAIESFGAMQ--RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
++A+ F +Q ++G PD T LSAC+ G +D G + K+
Sbjct: 448 SGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE- 506
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
I N + ++D+ ++G +++A ++ S+G K D +W ++ +H GE
Sbjct: 507 RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGLAMHGR---GEAA 562
Query: 325 IEHLIELK-AQESGDYVLLLNL 345
IE ++++ Q + V NL
Sbjct: 563 IELFLDMQETQVKPNSVTFTNL 584
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 146/297 (49%), Gaps = 9/297 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFE 83
P + A + + + C+ L QIHA++LR D + L +S+F
Sbjct: 132 PASATATNVGDRALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDY 191
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FD+IPQ + +WN+LI + ++ +F + +S P+ T ++++A
Sbjct: 192 ARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRM-LHDSPFGPNKFTFPVLIKAV 250
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVS 201
A G+ +H + +G + + NSLI Y+ CG L +A+ VF+ + KD+VS
Sbjct: 251 AERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVS 310
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
W++M++G G+ A++ F M+ GV P+ T V+SAC+ + G D +
Sbjct: 311 WNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYID 370
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL-GACRIHKH 317
++ ++ N++ +D+ + G ++ A L +M K D W T++ G ++ +H
Sbjct: 371 RN-EMMMNLNVCNATIDMFVKCGEVEIARGLFDNME-KRDVVSWTTIIDGYAKMSEH 425
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 316/505 (62%), Gaps = 10/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R Y+ S +P + +M RI + F +K K ++ G IH+ +R+G
Sbjct: 101 MTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNG 160
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + +L+ +Y+ + A +F+ + RD VA +I+ + N R +AL LF
Sbjct: 161 FESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFR 220
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G +PD T + +L A A LGALE G ++H Y+ + G ++ NSL+ +Y+K
Sbjct: 221 EMSAE--GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAK 278
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C ++ E++ VSW+++I GLA+NG G +A+E F M+ G+ P + TF GV
Sbjct: 279 CDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGV 330
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSHCG++DEG + RM ++FGI+P I HYGC+VDLL RAGL+ QAY+ I +M V+P
Sbjct: 331 LYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQP 390
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ WRTLLGAC IH H+ LGE HL++L+ + SGDYVLL NLY+S W V+ +R
Sbjct: 391 NAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRR 450
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G++ T G S + L V+EF + + SHP+ ++Y +L++I + LK+ GYV +
Sbjct: 451 SMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTAN 510
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK ALSYHSEK AIAF L T PGTTIRV KNLR+C DCH K+++ VY+
Sbjct: 511 VLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYD 570
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE++IRDR RFHHFR G CSC DYW
Sbjct: 571 REIVIRDRGRFHHFRGGSCSCKDYW 595
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/438 (46%), Positives = 292/438 (66%), Gaps = 2/438 (0%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+T ++ Y+ + A LFD + +RD V WNV+I Y +N +AL LF + + ++
Sbjct: 127 LTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA 186
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
KP++VT L VL AC LGALE G +H YI +G +++ +L+ MYSKCGSL A
Sbjct: 187 --KPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 244
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VF + +KDVV+W++MI G AM+G ++A++ F +M R G+ P + TF G+LSAC H
Sbjct: 245 RLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHS 304
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
G V EG ++M ++GI P I HYGC+V+LLGRAG ++QAY+L+ +M ++PD +W T
Sbjct: 305 GWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGT 364
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGACR+H + LGE+++E L++ SG Y+LL N+Y++VG+W+ V LR M + G+
Sbjct: 365 LLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGV 424
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PGCS+I + VHEF+ ++HP+ EIY ML+EIN LK GY + LH++G
Sbjct: 425 KKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 484
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
EK +L HSEKLAIAFG++ T PGTTI++ KNLR+C DCH K++S + R++++RD
Sbjct: 485 TEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRD 544
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF G CSC DYW
Sbjct: 545 RNRFHHFVNGSCSCGDYW 562
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + P E LF +M + + N + C + +L G +H+ + +G
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 220
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + + T L+D+YS +A +FD+I +D VAWN +I Y + +++AL LF
Sbjct: 221 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 280
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYS 179
++ R G P ++T + +L AC H G + G I ++ E+G K+ ++ +
Sbjct: 281 SMCR--MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLG 338
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G + A+E+ K M E D V W ++ ++G
Sbjct: 339 RAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 373
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 15/217 (6%)
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+IH + HG L L Y+ G L + +F V W+A+I G A+ G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
A + F M + + T +L+ + G +D + D M + G+ N+
Sbjct: 108 DVVSAQQLFDTMPEKSLV----SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV--- 160
Query: 274 GCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
++D + G+ ++A L M KP+ ++L AC + G R + IE
Sbjct: 161 --MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG-RWVHSYIE 217
Query: 331 LKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEK 365
+ +V L+++YS G E + + + +++K
Sbjct: 218 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 254
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/505 (41%), Positives = 313/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + E F F ++ + + F+ F IK C L+ G IH+ VL++G
Sbjct: 72 MIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNG 131
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD+ + +TL+D+Y+ A +LFD +P++D V V+I+ Y + ++ LFD
Sbjct: 132 LHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFD 191
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G PD V + ++ ACA LGA+ +H Y+ Y + L ++I MY+K
Sbjct: 192 QMRRD--GFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAK 249
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ + E+F M +K+V+SWSAMI +G GR+A+E F M +G+ P+ TF +
Sbjct: 250 CGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISL 309
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLVD+G+ MS +G+ P++ HY C+VDLLGRAG LDQA +LI +M V+
Sbjct: 310 LYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEK 369
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IW LGACRIH+ V L E+ + L+ L+ Q G Y+LL N+Y++ G W+ V ++R
Sbjct: 370 DEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRN 429
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ L+ PG + I + +++ F D SH R NEIY+ML ++++L+ AGYV + S
Sbjct: 430 LMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNS 489
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K L HSEKLAIAFG++ATP GT IR+ KNLR+C DCH+F K++S +
Sbjct: 490 VLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQ 549
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF+EG CSC DYW
Sbjct: 550 RDIIVRDANRFHHFKEGICSCGDYW 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+++H ++ G + + N L+ M +K L A +F M E+D VSWS MI G N
Sbjct: 20 KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH- 271
G ++F + RAG PD+ + V+ AC D + + R+ + +H
Sbjct: 80 GDYERCFQTFRELIRAGSKPDNFSLPFVIKACR-----DTMGLIMGRLIHSTVLKNGLHL 134
Query: 272 -HYGC--VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++ C +VD+ + G++D A QL M K + RT++ A
Sbjct: 135 DNFVCSTLVDMYAKCGMIDNAKQLFDRMPKK--DLVTRTVMIA 175
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/505 (41%), Positives = 314/505 (62%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + EEG LF +M ++ + N I C ++ G ++HA +LR+G
Sbjct: 203 MIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG 262
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L T L+D+Y + A +FD + +D + W +IS Y + A LF
Sbjct: 263 FGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF- 321
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G +P+++T + +L CA GAL+ G+ H YI + G + L +LI MY+K
Sbjct: 322 -VQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAK 380
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F ++D+ +W+ M++G M+G+G A++ F M+ GV P+D TF G
Sbjct: 381 CGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGA 440
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV EG ++M DFG++P + HYGC+VDLLGRAGLLD+AY++I SM V P
Sbjct: 441 LHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTP 500
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ IW +L AC+IHK+ +GE L+ L+ Q G VL+ N+Y++ W V +R+
Sbjct: 501 NIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRK 560
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ + G++ PG S+I + G+VH+F + D +HP I +I +ML E++K+LK AGY+ + +
Sbjct: 561 AVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSV 620
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LHN+ EEK AL+YHSEKLA+AFG+++T PGT IRV KNLRIC DCH K+LS +Y
Sbjct: 621 VLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYK 680
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RDR RFHHFREG CSC YW
Sbjct: 681 RVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 163/345 (47%), Gaps = 25/345 (7%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
S P + MR+ I + F +K C + G +IH +++G D ++
Sbjct: 88 SHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVV 147
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR-----NQRT----RDALCLF 119
LM +YS A LFD++ +RD V+W+ +I YI +QR+ + +
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGY 207
Query: 120 DNLNREESGCK-----------PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N E G + P+D+T L ++ +C +GA++ G+++H YI +G+G +
Sbjct: 208 IRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
L +L+ MY KCG + A +F M KDV++W+AMIS A A + F M+
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
GV P++ T +LS C+ G +D G F + K G+ ++ ++D+ + G +
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQ-GVEVDVILKTALIDMYAKCGDISG 386
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
A +L S + D W ++ +H + GE+ ++ E++
Sbjct: 387 AQRLF-SEAIDRDICTWNVMMAGYGMHGY---GEKALKLFTEMET 427
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/536 (41%), Positives = 320/536 (59%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS S PEE L+ M +P N + F +K C +L QIHA +++ G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR------------ 108
+ + +L+++YS A LFD++ QRDTV+WN +I Y +
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 109 -------------------NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+ ++AL LF + + +G K D+V + LQACA LG L
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRM--QTAGIKLDNVALVSTLQACADLGVL 266
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G+ IH YI +H L LI MY+KCG L A EVF+ M EK V W+AMISG
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++G GR+A+E F MQ AGV P+ TFTG+L+ACSH GLV E + + M + G P+
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPS 386
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLLGRAGLL +A +LI +M VKP++ IW LL AC IH ++ LG+++ + LI
Sbjct: 387 IEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILI 446
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
++ G Y+ L +++++ G+W + +R M E+G+ PGCS I + G HEF+ D
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP+I EI ML++I ++L+ GY ++ L +L +EK A+ +HSEKLA+ FG+++
Sbjct: 507 ESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLIS 566
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PG TIR+ KNLR+C DCH K++S VY RE+++RDR RFH F++G C+C DYW
Sbjct: 567 TKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 42/311 (13%)
Query: 41 MKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTV 97
++ CS M L QIH ++L+ G LD + L+ ++ A +FD I + +T
Sbjct: 25 LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTF 84
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
WN +I Y ++ +AL L+ ++ + T +L+AC+ + ALE ++IH
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHMLYH--SVPHNAYTFPFLLKACSSMSALEETQQIHA 142
Query: 158 YISEHGYGSKMNLCNSLIAMYS-------------------------------KCGSLGM 186
+I + G+GS++ NSL+ +YS KCG + M
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEM 202
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A+E+F MPE++++SW++MISG G ++A+ F MQ AG+ D+ L AC+
Sbjct: 203 AYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 247 CGLVDEGMMFLDRMSK-DFGILPNIHHYGCV-VDLLGRAGLLDQAYQLITSMGVKPDSTI 304
G++D+G + K + I P + GCV +D+ + G L++A ++ M K S +
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKMEEKGVS-V 318
Query: 305 WRTLLGACRIH 315
W ++ IH
Sbjct: 319 WTAMISGYAIH 329
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/510 (42%), Positives = 321/510 (62%), Gaps = 10/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK----RIPTNPFACSFAIKCCMKFCSLMGGLQIHARV 56
++R ++SS P + + M RI + CSFA+K C + + +Q+H+++
Sbjct: 72 VIRGTALSSDPANAVFWYRAMAASNGLHRI--DALTCSFALKACARALARSEAIQLHSQL 129
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR G+ D L TTL+D Y+ A KLFDE+PQ D +WN LI+ + + R DA+
Sbjct: 130 LRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAI 189
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + + + +P+ VT L AC+ LGAL+ GE +H+YI E S + +CN +I
Sbjct: 190 MTFKRM-KVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVID 248
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCGS+ A+ VF+ M +K +++W+ MI AM+G G A++ F + R+G+ PD
Sbjct: 249 MYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAV 308
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
++ VL AC+H GLV++G+ + M++ G+ PNI HYG +VDLLGRAG L +AY +++S
Sbjct: 309 SYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSS 367
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ P+ +W+TLLGACR + V + E L+E+ GD+VLL N+Y++ W+ V
Sbjct: 368 LPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDV 426
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M + ++ TPG S I +KG +++FV D SH EIY LDEIN ++K GY
Sbjct: 427 GRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYS 486
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
A+ ++ LH++G E+K NAL YHSEKLA+AFG+ T GT I+V KNLRIC DCH K++
Sbjct: 487 ADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLI 546
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S +Y RE+I+RDR RFH F+EG CSC DYW
Sbjct: 547 SKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP--DDQT 236
S G L A +F+ +P W+A+I G A++ +A+ + AM + D T
Sbjct: 46 SSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALT 105
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ L AC+ E + ++ + FG ++ ++D + G LD A +L M
Sbjct: 106 CSFALKACARALARSEAIQLHSQLLR-FGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEM 164
Query: 297 GVKPDSTIWRTLLG 310
+PD W L+
Sbjct: 165 P-QPDIASWNALIA 177
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/456 (46%), Positives = 306/456 (67%), Gaps = 10/456 (2%)
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYIRNQ 110
AR L +G D +++T + S F + A + FDE+ +RD ++W+ +I YI+
Sbjct: 224 ARELFEGMP-DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEG 282
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+AL +F + +E+ +P VL ACA+LGAL+ G IH Y + L
Sbjct: 283 CFMEALEIFHQMQKEK--IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 340
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SL+ MY+KCG + +A+EVF+ M K+V SW+AMI GLAM+G DAI+ F M +
Sbjct: 341 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---I 397
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
+P++ TF GVL+AC+H GLV +G+ + M K++G+ P I HYGC+VDLLGRAGLL +A
Sbjct: 398 YPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 457
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
++++S+ +P +W LLGACR H +V LGERV + L+EL+ Q SG Y LL N+Y+ G
Sbjct: 458 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 517
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGL-KGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
WE+V E+R+ M E+G++TTPG S I L +G VH+F++ D SHP++ +IYQMLD++ ++L
Sbjct: 518 RWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 577
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
++ GY + + L ++ EEK A+ HSEKLAI FG++ T PGTTIR+ KNLR+C DCH
Sbjct: 578 QMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCH 637
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ K++S VYNRE+I+RDR+R+HHFR G CSC D+W
Sbjct: 638 SATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 51/320 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ ++ P + L+ +M N + +K C + G+Q+HA +++ G
Sbjct: 109 MIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
D ++++ + +Y++F + EA ++ D+ + D V WN +I Y+R A LF
Sbjct: 169 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + PD S ++ N++I+ +S
Sbjct: 229 EGM--------PDR--------------------------------SMISTWNAMISGFS 248
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG + +A E F M E+D +SWSAMI G G +A+E F MQ+ + P
Sbjct: 249 RCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPS 308
Query: 240 VLSACSHCGLVDEGM---MFLDRMSKDF-GILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
VLSAC++ G +D+G + R S G+L +VD+ + G +D A+++
Sbjct: 309 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT-----SLVDMYAKCGRIDLAWEVFEK 363
Query: 296 MGVKPDSTIWRTLLGACRIH 315
M K S+ W ++G +H
Sbjct: 364 MSNKEVSS-WNAMIGGLAMH 382
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E +F +M++++I F + C +L G IH R+
Sbjct: 274 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 333
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
QLD L T+L+D+Y+ + A ++F+++ ++ +WN +I + R DA+ LF
Sbjct: 334 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 393
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
++ P+++T + VL ACAH G ++ G I + E+G ++ ++ +
Sbjct: 394 KMD-----IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 448
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A +V +P E W A++ +G+
Sbjct: 449 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 484
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/507 (41%), Positives = 319/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + +E LF++M + + + + C + S+ G Q+H+ + G
Sbjct: 191 MISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG 250
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLY + AC LF+ + +D ++WN LI Y ++AL LF
Sbjct: 251 FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 310
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L +L ACAHLGA+E G IH YI++ G + + SLI MY
Sbjct: 311 EMLR--SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMY 368
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF + + + SW+AMI G AM+G A + F M++ + PDD TF
Sbjct: 369 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 428
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M +D+ I P + HYGC++DLLG +GL +A ++I +M +
Sbjct: 429 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 488
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V LGE ++LI+++ + G YVLL N+Y++ G W +V ++
Sbjct: 489 EPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 548
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 549 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 608
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 609 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 668
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 669 YKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 174/347 (50%), Gaps = 35/347 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P YL+ M + N + F +K C K + G QIH VL+ G
Sbjct: 59 MFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 118
Query: 61 YQLDSQLMTTLMDLY----------STFEKS---------------------FEACKLFD 89
Y LD + T+L+ +Y F++S A K+FD
Sbjct: 119 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 178
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y ++AL LF + + + +PD+ T + V+ ACA ++
Sbjct: 179 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK--TNVRPDESTMVSVVSACAQSASI 236
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N+LI +Y KCG + A +F+G+ KDV+SW+ +I G
Sbjct: 237 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 296
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-GILP 268
++A+ F M R+G P+D T +L AC+H G ++ G ++K G+
Sbjct: 297 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 356
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
H ++D+ + G ++ A Q+ S+ + S+ W ++ +H
Sbjct: 357 ASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS-WNAMIFGFAMH 402
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 315/514 (61%), Gaps = 19/514 (3%)
Query: 9 SSPEEGFYLFEKMRQKRIP------------TNPFACSFAIKCCMKFCS----LMGGLQI 52
+S E LF+++ Q I +P + C++ S L G Q+
Sbjct: 75 ASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSKVKALAEGKQL 134
Query: 53 HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
H ++ G + ++ TL+++Y+ + ++FD+I + VA+N +I RN R
Sbjct: 135 HCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRA 194
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+AL LF L +E G KP DVT L+VL +CA LG+L+ G +H Y+ ++G+ + +
Sbjct: 195 NEALALFREL--QEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNT 252
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+LI MY+KCGSL A VF+ MP++D +WSA+I A +G G AI M++ V P
Sbjct: 253 TLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQP 312
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D+ TF G+L ACSH GLV+EG + M+ ++GI+P+I HYGC+VDLLGRAG LD+AY+
Sbjct: 313 DEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKF 372
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I + +KP +WRTLL AC H +V +G+RVIE + EL GDYV+ NL + G W
Sbjct: 373 IDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKW 432
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+ V LR+ M +KG PGCS+I + VVHEF + H +++ LDE+ K+LK A
Sbjct: 433 DDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSA 492
Query: 413 GYVAEITSELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNF 471
GYV + + + ++ EEK L YHSEKLAI FG+L TPPGTTIRV KNLR+C DCHN
Sbjct: 493 GYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNA 552
Query: 472 AKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
AK +S ++ R++I+RD RFHHF++G+CSC DYW
Sbjct: 553 AKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 165/364 (45%), Gaps = 40/364 (10%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYST--FEKSFE-ACKLFDEIPQRDTVAWNVLISCYI 107
QI A ++ YQ ++ ++T ++ ++ + S E A +LFD+I Q + V +N + Y
Sbjct: 44 QIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGY- 102
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R D L + + R L+ + + AL G+++H + + G
Sbjct: 103 --ARLNDPLRMITHFRR--------------CLRLVSKVKALAEGKQLHCFAVKLGVSDN 146
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
M + +LI MY+ CG + + VF + E VV+++A+I LA N +A+ F +Q
Sbjct: 147 MYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQE 206
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
G+ P D T VLS+C+ G +D G ++ K +G + ++D+ + G LD
Sbjct: 207 IGLKPTDVTMLVVLSSCALLGSLDLG-RWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLD 265
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLY 346
A + M K D+ W ++ A H G + I L E+K ++ D + L +
Sbjct: 266 DAVNVFRDMP-KRDTQAWSAIIVAYATHGD---GFQAISMLNEMKKEKVQPDEITFLGIL 321
Query: 347 SSVGDWEKVKELREFM----NEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP-RINEIYQM 401
+ V+E E+ NE G+ P G +VD + R++E Y+
Sbjct: 322 YACSHNGLVEEGFEYFHGMTNEYGI--VPSIKHYGC-------MVDLLGRAGRLDEAYKF 372
Query: 402 LDEI 405
+DE+
Sbjct: 373 IDEL 376
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 165/388 (42%), Gaps = 46/388 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + + ++ E LF ++++ + + C SL G +H V + G
Sbjct: 184 IIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYG 243
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ TTL+D+Y+ +A +F ++P+RDT AW+ +I Y + A+ + +
Sbjct: 244 FDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLN 303
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +E+ +PD++T L +L AC+H G +E G E H +E+G + ++ +
Sbjct: 304 EMKKEK--VQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLG 361
Query: 180 KCGSLGMAFEVFKGMPEKDV-VSWSAMISGLAMNGH---GRDAIESFGAMQRAGVFPDDQ 235
+ G L A++ +P K + W ++S + +G+ G+ IE + DD
Sbjct: 362 RAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFEL-------DD- 413
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
SH G + + +G +++H R ++D+ I
Sbjct: 414 ---------SHGG----DYVIFSNLCARYGKWDDVNHL--------RKTMIDKGAVKIPG 452
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGDWE 353
+ + +H T R ++ L+ K +S YV L Y+ + D E
Sbjct: 453 CSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELV--KELKSAGYVPDTSLVFYADMEDEE 510
Query: 354 KVKELREFMNEK-----GLQTTPGCSTI 376
K LR + +EK GL TP +TI
Sbjct: 511 KEIILR-YHSEKLAITFGLLNTPPGTTI 537
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 322/516 (62%), Gaps = 33/516 (6%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS---- 76
M K + N F S +K C SL G Q H +++ G++ D + T L+ +Y+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 77 ------TFEKSFE---------------------ACKLFDEIPQRDTVAWNVLISCYIRN 109
F+K E A KLF E+ +RD V+W +I+ Y +N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
++L +F+ + + +G K D VL ACA L ALE G + H Y+ + G+ +
Sbjct: 121 GYGDESLNVFNQMRK--TGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIV 178
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++L+ MY+K GS+ A +VF MP+++ VSW+++I+G A +G G DA+ F M +AG
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ P++ +F GVLSACSH GLV+EG + + M++++GI+P++ HY C++DLLGRAG LD+A
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEA 298
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
I M V+PD ++W LLGACRIH + L +R+ EHL+ ++ Q +G YVLL N+Y++
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W+ ++R+ M ++G+ PG S I +K ++H FV + SHP++ EI++ L+ +++++
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKM 418
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
K AGYV L ++ +EK +LS+HSEKLAIAFG++ T PGTTIRVAKNLR+C DCH
Sbjct: 419 KAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCH 478
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + R++++RD RFHHF++GRCSC DYW
Sbjct: 479 TVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 117/216 (54%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + +E +F +MR+ + ++ F + C +L G Q HA V++ G
Sbjct: 113 VIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSG 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD + + L+D+Y+ +AC++FD++PQR+ V+WN +I+ ++ R DA+ LF+
Sbjct: 173 FALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFE 232
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ ++G KP++++ + VL AC+H G + G +++ +G ++ +I +
Sbjct: 233 QM--LQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLG 290
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A GMP E DV W A++ ++G+
Sbjct: 291 RAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGN 326
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/502 (43%), Positives = 318/502 (63%), Gaps = 5/502 (0%)
Query: 1 MVRAYSMSSSP-EEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+R S S +P +E LF KM ++ P N F +F +K C +L G Q+HA VL+
Sbjct: 130 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLK 189
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ + T L++ Y+ E A K+FDEI R+ VAW+ +IS Y R +AL L
Sbjct: 190 SGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGL 249
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F ++ +++G PD+VT + V+ ACA GAL+ G+ +H YI++ + + L +L+ MY
Sbjct: 250 FRDM--QKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMY 307
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A EVF MP KD +WS+MI GLA+NG DA+E F M+ A V P+ TF
Sbjct: 308 AKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFI 367
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+H GLV EG + M +FGI+P++ YGC+VDLL RA L++ A L+ +M +
Sbjct: 368 GVLSACAHSGLVSEGRRYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPI 426
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P+ IWRTLL C+ K++ E V + L+EL+ + +Y+LL NLY+S+ WEK+ ++
Sbjct: 427 SPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQV 486
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G++ PGCS+I + G+VHEFV+ D SHP E+ ++L +I+K++ G+ I
Sbjct: 487 RKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGI 546
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LHN+ EEK NAL HSE+LAIA+G+L T IR+ KNLR+C DCH K++S
Sbjct: 547 SDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAE 606
Query: 479 YNREVIIRDRLRFHHFREGRCS 500
Y RE+I+RDR+RFH F G CS
Sbjct: 607 YRREIIVRDRVRFHKFVNGSCS 628
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDL----YSTFEKSFEACKLFDEIPQRDTVAWNVLI-SC 105
QIHAR+L + S + S + A KLF +I + + +WN +I C
Sbjct: 75 QIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRGC 134
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+++ + LF + R P+ T VL+AC+ + ALE G+++H + + G+G
Sbjct: 135 SQSQTPSKEPVILFRKMVRRGYP-NPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFG 193
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + +L+ Y+KC + +A +VF + ++++V+WS MISG A G +A+ F M
Sbjct: 194 SSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDM 253
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q+AGV PD+ T V+SAC+ G +D G ++K I ++ +V++ + G
Sbjct: 254 QKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQL-IETDLELSTALVNMYAKCGC 312
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLN 344
+++A ++ +M VK D+ W +++ I+ L E +E + +A+ ++V +
Sbjct: 313 IERAKEVFDAMPVK-DTKAWSSMIVGLAIN---GLAEDALEEFFRMEEAKVKPNHVTFIG 368
Query: 345 LYSSVGDWEKVKELREF 361
+ S+ V E R +
Sbjct: 369 VLSACAHSGLVSEGRRY 385
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/515 (42%), Positives = 302/515 (58%), Gaps = 33/515 (6%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS----- 76
R PT S C ++ G+Q+H RV+ G D ++ L+D+Y+
Sbjct: 115 RAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADM 174
Query: 77 -TFEKSF-------------------------EACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+ K F EA LFD +P+RDTV+W +I Y+
Sbjct: 175 GSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAA 234
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R R+AL +F + + S D+ T + V+ ACA LGALE GE + Y+S G +
Sbjct: 235 RFREALEMFREM--QYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFV 292
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+LI MYSKCGS+ A +VFKGM +D +W+A+I GLA+NG+ +AIE F M R
Sbjct: 293 GNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSE 352
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD+ TF GVL+AC+H GLVD+G F M + + I PN+ HYGC++DLLGRAG + +A
Sbjct: 353 TPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEAL 412
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
I M + P+STIW TLL ACR+H + +GE V E L+EL + S Y+LL N+Y+
Sbjct: 413 DTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCN 472
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
WE V+ LR + EKG++ PGCS I + G++HEFV D SHP EIY L+ I L
Sbjct: 473 RWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLN 532
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GY ++T + +EK L +HSEKLAIAF +L++ P T IR+ KNLR+C+DCHN
Sbjct: 533 NVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHN 592
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S +Y REV++RDR RFHHFR G CSC DYW
Sbjct: 593 AIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT-VAWNVLISCYIRNQ 110
+HA V+R G ++ + ++L+ Y+ A L E DT VAWN LIS + R
Sbjct: 45 VHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGEC---DTPVAWNALISGHNRGG 101
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGSKMN 169
R ++ F ++ R +G P VT + VL AC + G ++H + G +
Sbjct: 102 RFGESCGSFVDMAR--AGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLR 159
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG-------------- 215
+ N+L+ MY++C +G A++VF GM + VVSW++++SGLA G
Sbjct: 160 VENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERD 219
Query: 216 -----------------RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
R+A+E F MQ + V D+ T V++AC+ G ++ G
Sbjct: 220 TVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRV 279
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
MS+ GI + ++D+ + G +++A + M + D W ++ ++ +
Sbjct: 280 YMSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHR-DKFTWTAIILGLAVNGYE 337
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+ +I + E+ D V + + ++ V + REF
Sbjct: 338 EEAIEMFHRMI--RVSETPDEVTFIGVLTACTHAGLVDKGREF 378
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y ++ E +F +M+ + + F I C + +L G + + R G
Sbjct: 226 MIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 285
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D+ + L+D+YS A +F + RD W +I N +A+ +F
Sbjct: 286 IKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFH 345
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN--SLIAMY 178
+ R PD+VT + VL AC H G ++ G + + E Y N+ + +I +
Sbjct: 346 RMIRVSE--TPDEVTFIGVLTACTHAGLVDKGREFFLSMIE-AYNIAPNVVHYGCIIDLL 402
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G + A + MP + W +++ ++G+
Sbjct: 403 GRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGN 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 128 GCKPDDVTCLLVLQACAHL----GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
G +PD T +L+A A G+ +H ++ G G ++ +SL+A Y+ G
Sbjct: 14 GGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGD 73
Query: 184 LGMAFEVFKGMPEKDV-VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
A + + E D V+W+A+ISG G ++ SF M RAG P T+ VLS
Sbjct: 74 GAAARAL---VGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLS 130
Query: 243 ACSHCGLVDE--GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
AC G D GM R+ G+LP++ +VD+ + A+++ M V+
Sbjct: 131 ACGK-GTRDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRS 188
Query: 301 DSTIWRTLL 309
+ W +LL
Sbjct: 189 VVS-WTSLL 196
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/505 (41%), Positives = 319/505 (63%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + S E ++++M+Q + N + + C +L G +IH +V+ G
Sbjct: 400 MIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAG 459
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D+ + TL+++YS +A ++FD + QRD VA+N +I Y + ++AL LFD
Sbjct: 460 LATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFD 519
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +E G KPD VT + +L ACA+ G+LE+ +IH + + G+ S ++ N+L++ Y+K
Sbjct: 520 RL--QEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAK 577
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A VF+ M +++V+SW+A+I G A +G G+DA++ F M+ GV PD TF +
Sbjct: 578 CGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSL 637
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL++EG + MS+DF I+P I HYGC+VDLLGRAG LD+A LI +M +
Sbjct: 638 LSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQA 697
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IW LLGACRIH +V + ER E ++L + YV L ++Y++ G W+ +LR+
Sbjct: 698 NTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRK 757
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PG S I + +H FV +D SHP+ +IY LD + +K+ GYV + S
Sbjct: 758 LMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRS 817
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H++ EK NA+ +HSE+LAIA+G+++TPPGT I + KNLR+C DCH K +S + +
Sbjct: 818 VMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVD 877
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFHHF++G CSC DYW
Sbjct: 878 REIIARDVNRFHHFKDGVCSCGDYW 902
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 196/373 (52%), Gaps = 17/373 (4%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+ Y+ E F +F+KM Q+ + N + +L G +H+R+L G+
Sbjct: 199 IGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH 258
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + T L+ +Y+ S++ C+ +F+++ RD +AWN +I +A +++
Sbjct: 259 ESDTAVGTALVKMYAKC-GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYN 317
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G P+ +T +++L AC + AL +G++IH +++ G+ S + + N+LI+MYS+
Sbjct: 318 QMQRE--GVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSR 375
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M KDV+SW+AMI GLA +G G +A+ + MQ+AGV P+ T+T +
Sbjct: 376 CGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSI 435
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACS ++ G ++ + G+ + H +V++ G + A Q+ M ++
Sbjct: 436 LNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQR 493
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWEK 354
D + ++G H LG+ ++ L QE G Y+ +LN ++ G E
Sbjct: 494 DIVAYNAMIGGYAAH---NLGKEALKLFDRL--QEEGLKPDKVTYINMLNACANSGSLEW 548
Query: 355 VKELREFMNEKGL 367
+E+ + + G
Sbjct: 549 AREIHTLVRKGGF 561
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 189/406 (46%), Gaps = 46/406 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y E+ L +M+Q + + + C +L G +IH + ++ G
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D ++ ++++Y+ EA ++FD++ ++ V+W + I Y R+ A +F
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ 216
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E+ G P+ +T + VL A + AL++G+ +H I G+ S + +L+ MY+K
Sbjct: 217 KM--EQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK 274
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS +VF+ + +D+++W+ MI GLA G+ +A E + MQR GV P+ T+ +
Sbjct: 275 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVIL 334
Query: 241 LSAC-----------------------------------SHCGLVDEGMMFLDRMSKDFG 265
L+AC S CG + + + D+M
Sbjct: 335 LNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM----- 389
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+ ++ + ++ L ++G +A YQ + GV+P+ + ++L AC + G
Sbjct: 390 VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGR 449
Query: 323 RVIEHLIELK-AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
R+ + ++E A ++ L+N+YS G + +++ + M ++ +
Sbjct: 450 RIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDI 495
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 6/276 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QR 94
+K C++ L+ G Q+H +++ D + L+++Y EA +++ ++ +R
Sbjct: 30 LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMER 89
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+WN ++ YI+ AL L + ++ G PD T + L +C GALE+G +
Sbjct: 90 TVHSWNAMVVGYIQYGYIEKALKLLRQM--QQHGLAPDRTTIMSFLSSCKSPGALEWGRE 147
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
IH + G + + N ++ MY+KCGS+ A EVF M +K VVSW+ I G A G
Sbjct: 148 IHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGR 207
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
A E F M++ GV P+ T+ VL+A S + G R+ + G +
Sbjct: 208 SETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRI-LNAGHESDTAVGT 266
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+V + + G Q+ + V D W T++G
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIG 301
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 15/232 (6%)
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
++ G + + + +L+ C + L G ++H++I +H N+LI MY +CGS+
Sbjct: 15 QQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSI 74
Query: 185 GMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
A +V+K + E+ V SW+AM+ G G+ A++ MQ+ G+ PD T LS
Sbjct: 75 EEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLS 134
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+C G ++ G + + G+L ++ C++++ + G +++A ++ M K
Sbjct: 135 SCKSPGALEWGRE-IHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKME-KKSV 192
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSS 348
W +G + G I K ++ G Y+ +LN +SS
Sbjct: 193 VSWTITIGG-----YADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/505 (41%), Positives = 316/505 (62%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + S E +F+ M+Q + N + + C +L G +IH +V+ G
Sbjct: 518 MIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAG 577
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D+ + TL+++YS +A ++FD + QRD VA+N +I Y + ++AL LFD
Sbjct: 578 LATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFD 637
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +E G KPD VT + +L ACA+ G+LE+ ++IH + + GY S +L N+L++ Y+K
Sbjct: 638 RL--QEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAK 695
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A VF M +++V+SW+A+I G A +G G+D ++ F M+ G+ PD TF +
Sbjct: 696 CGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSL 755
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL++EG + MS+DFGI P I HYGC+VDLLGRAG LD+ LI +M +
Sbjct: 756 LSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQA 815
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IW LLGACRIH +V + ER E ++L + YV L ++Y++ G W+ +LR+
Sbjct: 816 NTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRK 875
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PG S I + +H FV +D SHP +IY LD++ +K+ GYV + S
Sbjct: 876 LMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRS 935
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H++ EK NA+ +HSE+LAIA+G+++T PGT IR+ KNLR+C DCH K ++ + +
Sbjct: 936 VMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVD 995
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE++ RD RFHHF++G CSC DYW
Sbjct: 996 REIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 192/373 (51%), Gaps = 17/373 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E F +F+KM+Q+ + N + +L G +H+ +L G
Sbjct: 316 IIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAG 375
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
++ D + T L+ +Y+ S++ C+ +F+++ RD +AWN +I +A ++
Sbjct: 376 HESDLAVGTALVKMYAKC-GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIY 434
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ RE G P+ +T +++L AC + AL +G +IH + + G+ +++ N+LI+MY+
Sbjct: 435 HQMQRE--GMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYA 492
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CGS+ A +F M KD++SW+AMI GLA +G G +A+ F MQ+AG+ P+ T+T
Sbjct: 493 RCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L+ACS +D G ++ + G+ + H +V++ G + A Q+ M +
Sbjct: 553 ILNACSSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM-TQ 610
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWE 353
D + ++G H LG+ ++ L QE G Y+ +LN ++ G E
Sbjct: 611 RDIVAYNAMIGGYAAH---NLGKEALKLFDRL--QEEGLKPDKVTYINMLNACANSGSLE 665
Query: 354 KVKELREFMNEKG 366
KE+ + + G
Sbjct: 666 WAKEIHSLVLKDG 678
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 189/401 (47%), Gaps = 36/401 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y EE L +M+Q + + C +L G +IH ++
Sbjct: 215 MVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + ++++Y+ EA ++FD++ + V+W ++I Y + A +F
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQ 334
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G P+ +T + VL A + AL++G+ +H +I G+ S + + +L+ MY+K
Sbjct: 335 KMQQE--GVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAK 392
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS +VF+ + +D+++W+ MI GLA G+ +A E + MQR G+ P+ T+ +
Sbjct: 393 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVIL 452
Query: 241 LSACS-----------HCGLVDEGMMFLDRMS-------------KDFGILPN------I 270
L+AC H +V +G MF + KD +L N I
Sbjct: 453 LNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDI 512
Query: 271 HHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ ++ L ++GL +A +Q + G+KP+ + ++L AC + G R+ +
Sbjct: 513 ISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQ 572
Query: 328 LIELK-AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+IE A ++ L+N+YS G + +++ + M ++ +
Sbjct: 573 VIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 6/276 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI--PQR 94
+K C++ L+ G ++H +++ LD + L+++Y EA ++++++ +R
Sbjct: 148 LKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTER 207
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+WN ++ Y++ +AL L + ++ G T + +L +C ALE G +
Sbjct: 208 TVHSWNAMVVGYVQYGYIEEALKLLREM--QQHGLALGRATTMRLLSSCKSPSALECGRE 265
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
IH + +N+ N ++ MY+KCGS+ A EVF M K VVSW+ +I G A GH
Sbjct: 266 IHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGH 325
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
A E F MQ+ GV P+ T+ VL+A S + G + + G ++
Sbjct: 326 SEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI-LNAGHESDLAVGT 384
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+V + + G Q+ + V D W T++G
Sbjct: 385 ALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIG 419
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/536 (41%), Positives = 319/536 (59%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS S PEE L+ M +P N + F +K C + QIHA +++ G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMG 148
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR------------ 108
+ + +L+++YS A LFD++ QRDTV+WN +I Y +
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 109 -------------------NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+ ++AL LF + + +G K D+V + LQACA LG L
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRM--QTAGIKLDNVALVSTLQACADLGVL 266
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G+ IH YI +H L LI MY+KCG L A EVF+ M EK V W+AMISG
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++G GR+A+E F MQ AGV P+ TFTG+L+ACSH GLV E + + M + G P+
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPS 386
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLLGRAGLL +A +LI +M VKP++ IW LL AC IH ++ LG+++ + LI
Sbjct: 387 IEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILI 446
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
++ G Y+ L +++++ G+W + +R M E+G+ PGCS I + G HEF+ D
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP+I EI ML++I ++L+ GY ++ L +L +EK A+ +HSEKLA+ FG+++
Sbjct: 507 ESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLIS 566
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PG TIR+ KNLR+C DCH K++S VY RE+++RDR RFH F++G C+C DYW
Sbjct: 567 TKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 151/311 (48%), Gaps = 42/311 (13%)
Query: 41 MKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTV 97
++ CS M L QIH ++L+ G LD + L+ ++ A +FD I + +T
Sbjct: 25 LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTF 84
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
WN +I Y ++ +AL L+ ++ + T +L+AC+ + A E ++IH
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHMLYH--SVPHNAYTFPFLLKACSSMSASEETQQIHA 142
Query: 158 YISEHGYGSKMNLCNSLIAMYS-------------------------------KCGSLGM 186
+I + G+GS++ NSL+ +YS KCG + M
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEM 202
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A+E+F MPE++++SW++MISG G ++A+ F MQ AG+ D+ L AC+
Sbjct: 203 AYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 247 CGLVDEGMMFLDRMSK-DFGILPNIHHYGCV-VDLLGRAGLLDQAYQLITSMGVKPDSTI 304
G++D+G + K + I P + GCV +D+ + G L++A ++ M K S +
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKMEEKGVS-V 318
Query: 305 WRTLLGACRIH 315
W ++ IH
Sbjct: 319 WTAMISGYAIH 329
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/507 (40%), Positives = 317/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSS-SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RAY+ + S ++ L+ M I N F F +K C L G +H V++
Sbjct: 102 LIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKF 161
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + T++ +YS + K+FDE+P+ D+V W+ +I Y R R+ +A+ L
Sbjct: 162 GFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVAL 221
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E C PD++T + +L AC LGALE G+ I YI H + + N+LI M+
Sbjct: 222 FREMQMAEV-C-PDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMF 279
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A ++F+ M EK +VSW+++I G+AM+G G++A F M +GV PDD F
Sbjct: 280 AKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFI 339
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH GLV+ G + M K + ++P I HYGC+VD+ R GL+ +A + + +M +
Sbjct: 340 GLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPI 399
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P+ I RTL+ ACR H LGE++ + L++ + +YVLL N+Y+ WEK ++
Sbjct: 400 EPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKI 459
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M KG++ PG + I + ++EFV D SH + EIY+M+DE+ +++K +GY
Sbjct: 460 REVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPST 519
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L ++ E+K ++L+ HSEKLAIAFG+L TPPGT IR+ KNLR+C DCH+ +K +S +
Sbjct: 520 SEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKI 579
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y+RE+I+RDR RFHHF+ G+CSC D+W
Sbjct: 580 YDREIIMRDRNRFHHFKSGQCSCGDFW 606
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/505 (43%), Positives = 308/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y + Y+F M + I + +K + C G IH V++ G
Sbjct: 60 MIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMG 119
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D T L+ LY T +A +LFDE+P+R+ V WN LI+ Y N++ A+ F
Sbjct: 120 FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFR 179
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G +P + T ++VL AC+HLGA G+ IH +I + + + +LI MY+K
Sbjct: 180 GMLAD--GAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ +VF+ + EK+V +W+ +ISG AMNG G A+++F M PD+ TF GV
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GLV EG M + FG+ P I HYGC+VDLLGRAGLL++A +LI SM ++P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IWR LL ACR+H + LGE +I+ LIEL+ +YVLL N+YS W +V +LR
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
MN +G++ PGCS+I + VV+EFV + P IY+ LD + K+LK GYV
Sbjct: 418 MMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDM 477
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+++ EEK +++ YHSEKLA+AFG+L +P T+R+ KNLRIC+DCH F KVLS VY
Sbjct: 478 ALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYK 537
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +++RDR RFHHF EG CSC DYW
Sbjct: 538 RYIVVRDRNRFHHFYEGFCSCRDYW 562
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/505 (40%), Positives = 313/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS+S SP L++ M I N + F + C K L G ++H+++++ G
Sbjct: 38 IIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQELHSQIVKAG 97
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ L+ L+ LY+ AC +FDE+P+ D+ +W+ ++S Y +N + + L L
Sbjct: 98 LDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLR 157
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E D T V+ C LG L+ G+ +H YI + G + L +L+ MYSK
Sbjct: 158 EMQAEN--VSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSK 215
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +VF+GM E+DV +WS MI+G A++GH A++ F AM+R+ + P+ TFT V
Sbjct: 216 CGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSV 275
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV++G + M ++ I P I HYGC+VDL RAG++ A++ I +M ++P
Sbjct: 276 LSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEP 335
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WRTLLGAC+ H + LGE + +++L +YV + N+Y+S+G W V ++R
Sbjct: 336 NVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRS 395
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK + G S+I + +VH+F++ + SHP+ +IY ML ++ ++LK G+VA
Sbjct: 396 LMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTVD 455
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EEK AL HSE+LAIA+G+L TP G+ IR+ KNLR C DCH K++S VYN
Sbjct: 456 VLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYN 515
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RDR+ FHHFRE CSCNDYW
Sbjct: 516 REIILRDRVCFHHFRERGCSCNDYW 540
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S G + A +F ++ W+ +I G +++ AI + M G+ P+ TF
Sbjct: 12 SPHGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFG 71
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL+AC + EG ++ K G+ ++ L G +D A + M
Sbjct: 72 FVLNACCKLLRLCEGQELHSQIVKA-GLDFETPLLNGLIKLYAACGCMDYACVMFDEMP- 129
Query: 299 KPDSTIWRTLL 309
+PDS W T++
Sbjct: 130 EPDSASWSTMV 140
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/510 (42%), Positives = 320/510 (62%), Gaps = 10/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK----RIPTNPFACSFAIKCCMKFCSLMGGLQIHARV 56
++R ++SS P + + M RI + CSFA+K C + + +Q+H+++
Sbjct: 72 VIRGTALSSDPANAVFWYRAMAASNGLHRI--DALTCSFALKACARALARSEAIQLHSQL 129
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR G+ D L TTL+D Y+ A KLFDE+PQ D +WN LI+ + + R DA+
Sbjct: 130 LRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAI 189
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + + + +P+ VT L AC+ LGAL+ GE +H+YI E S + +CN +I
Sbjct: 190 MTFKRM-KVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVID 248
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCGS+ A+ VF+ M +K +++W+ MI AM+G G A++ F + R+G+ PD
Sbjct: 249 MYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAV 308
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
++ VL AC+H GLV++G+ + M++ G+ PNI HYG +VDLLGRAG L +AY +++S
Sbjct: 309 SYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSS 367
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ P+ +W+TLLGACR + V + E L+E+ G +VLL N+Y++ W+ V
Sbjct: 368 LPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDV 426
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M + ++ TPG S I +KG +++FV D SH EIY LDEIN ++K GY
Sbjct: 427 GRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYS 486
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
A+ ++ LH++G E+K NAL YHSEKLA+AFG+ T GT I+V KNLRIC DCH K++
Sbjct: 487 ADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLI 546
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S +Y RE+I+RDR RFH F+EG CSC DYW
Sbjct: 547 SKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP--DDQT 236
S G L A +F+ +P W+A+I G A++ +A+ + AM + D T
Sbjct: 46 SSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALT 105
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ L AC+ E + ++ + FG ++ ++D + G LD A +L M
Sbjct: 106 CSFALKACARALARSEAIQLHSQLLR-FGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEM 164
Query: 297 GVKPDSTIWRTLLG 310
+PD W L+
Sbjct: 165 P-QPDIASWNALIA 177
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 309/505 (61%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY ++ LF +M K + + ++ + + C SL G +H + ++
Sbjct: 726 LIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNN 785
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L + LMD+Y+ EA +F +IP +D V+WN +I Y +N +AL LF
Sbjct: 786 MALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFA 845
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E +PD +T +L AC L ALE G IH I +GY S++++ N+LI MY K
Sbjct: 846 EMQKES---RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVK 902
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F +PEKD+++W+ MISG M+G G +AI +F M+ AG+ PD+ TFT +
Sbjct: 903 CGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSI 962
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL++EG F + M + + P + HY C+VDLL R G L +AY LI +M +KP
Sbjct: 963 LYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKP 1022
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V EH+ EL+ +G YVLL N+Y+ WE+VK+LRE
Sbjct: 1023 DATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRE 1082
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ ++GL+ +PGCS I ++G FV D +HP+ I+ +L+ + ++K G+ ++
Sbjct: 1083 RIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRY 1142
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N G EK AL HSEKLA+AFG+L P G TIRVAKNLR+C DCH AK +S
Sbjct: 1143 ALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTR 1202
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC D+W
Sbjct: 1203 REIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 172/350 (49%), Gaps = 7/350 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E YLF+KM++ I N + S +KC + +IH V + G
Sbjct: 524 MMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLG 583
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ +L+ Y + A KLFDE+ RD V+WN +IS + N + AL F
Sbjct: 584 FGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFV 643
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G D T + + ACA++G+L G +H + + ++ N+L+ MYSK
Sbjct: 644 QMLILRVGV--DLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSK 701
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A + F+ M +K VVSW+++I+ G DAI F M+ GV PD + T V
Sbjct: 702 CGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSV 761
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ +D+G + + K+ L + ++D+ + G +++AY + + + VK
Sbjct: 762 LHACACGNSLDKGRDVHNYIRKNNMALC-LPVSNALMDMYAKCGSMEEAYLVFSQIPVK- 819
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
D W T++G + +L ++ E++ + D + + L + G
Sbjct: 820 DIVSWNTMIGG---YSKNSLPNEALKLFAEMQKESRPDGITMACLLPACG 866
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 8/294 (2%)
Query: 20 KMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTF 78
+M QK + N + S ++ C + L G +H+ + +G ++ L L+ +Y +
Sbjct: 442 RMSQKSELDLNAY--SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSC 499
Query: 79 EKSFEACKLFDEIPQRDTV-AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
E ++FD I + V WN+++S Y + R+++ LF + ++ G + T
Sbjct: 500 GALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKM--QKLGITGNSYTFS 557
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
+L+ A LG + ++IH + + G+GS + NSLIA Y K G + A ++F + ++
Sbjct: 558 CILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR 617
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
DVVSW++MISG MNG A+E F M V D T ++AC++ G + G
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALH 677
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ K + ++D+ + G L+ A Q MG K + W +L+ A
Sbjct: 678 GQGVKAC-FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVS-WTSLIAA 729
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-MPEK 197
+LQ CA L+ G+ +H IS +G + L L+ MY CG+L +F + +
Sbjct: 457 ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 516
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
V W+ M+S A G R++I F MQ+ G+ + TF+ +L + G V E
Sbjct: 517 KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 576
Query: 258 DRMSK-DFGILPNIHHYGCVVDLL----GRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ K FG Y VV+ L ++G +D A++L +G + D W +++ C
Sbjct: 577 GCVYKLGFG------SYNTVVNSLIATYFKSGEVDSAHKLFDELGDR-DVVSWNSMISGC 629
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/496 (42%), Positives = 303/496 (61%), Gaps = 5/496 (1%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
+P LF M + +P + F +K S + IH VL+ G+ + +
Sbjct: 78 APSLALALFSHMHRTNVPFDHFTFPLILKS-----SKLNPHCIHTLVLKLGFHSNIYVQN 132
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
L++ Y T + KLFDE+P+RD ++W+ LISC+ + +AL LF + +ES
Sbjct: 133 ALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDI 192
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
PD V L V+ A + LGALE G +H +IS G ++L ++LI MYS+CG + + +
Sbjct: 193 LPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRSVK 252
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF MP ++VV+W+A+I+GLA++G GR+A+E+F M +G+ PD F GVL ACSH GL
Sbjct: 253 VFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGL 312
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V+EG M ++GI P + HYGC+VDLLGRAG++ +A+ + M V+P+S IWRTLL
Sbjct: 313 VEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLL 372
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
GAC H + L E+ E + EL GDYVLL N Y VG+W K + +R M E +
Sbjct: 373 GACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIVK 432
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PG S + + V HEFV D SHP+ EI + L + +K+ GY + LH++ EE
Sbjct: 433 EPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPSTKNVLHDIQEEE 492
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K ++L YHSEKLA+AF +L TIRV KNLRIC DCH+F K +SG ++R+++IRDR
Sbjct: 493 KEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFMKHVSGFFDRDIVIRDRS 552
Query: 490 RFHHFREGRCSCNDYW 505
RFHHFR+G CSC D+W
Sbjct: 553 RFHHFRKGSCSCRDFW 568
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/537 (40%), Positives = 323/537 (60%), Gaps = 34/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA S S +P E L+ M Q + + F IK C + GL +H V++ G
Sbjct: 137 LIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSG 196
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN----------- 109
++ DS ++++L+ LY+ + A +LF+ RD V+WN +I Y+++
Sbjct: 197 FECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFD 256
Query: 110 --------------------QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+ +AL LFD + G KP + T + +L ACAHLGAL
Sbjct: 257 RMVCRDVISWNTMINGYAICGKPNEALALFDQM--RAVGVKPTEATVVSLLSACAHLGAL 314
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G +H YI+++ + +L+ MY+KCG + +A +VF M KDV++W+ +I+G+
Sbjct: 315 DKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGM 374
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++G+ ++A + F M+ AGV P+D TF +LSACSH G+VDEG LD MS +GI P
Sbjct: 375 AIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPK 434
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGCV+DLL RAG L++A +LI +M ++P+ + LLG CRIH + LGE V + LI
Sbjct: 435 VEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 494
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
L+ SG Y+LL N+Y++ W+ +++R M G+ PG S I LKG+VH FV D
Sbjct: 495 NLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGD 554
Query: 390 VSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
SHP N+IY+ L+EI+ +LK A GY A+ + L ++ E+K +AL+ HSEKLAIA+G+L
Sbjct: 555 WSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLL 614
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IR+ KNLR+C DCH+ K++S VY RE+I+RDR RFHHF +G CSC D+W
Sbjct: 615 HLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/456 (46%), Positives = 305/456 (66%), Gaps = 10/456 (2%)
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYIRNQ 110
AR L +G D +++T + S F + A + FDE+ +RD ++W+ +I YI+
Sbjct: 223 ARELFEGMP-DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEG 281
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+AL +F + +E+ +P VL ACA+LGAL+ G IH Y + L
Sbjct: 282 CFMEALEIFHQMQKEK--IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 339
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SL+ MY+KCG + +A+EVF+ M K+V SW+AMI GLAM+G DAI+ F M +
Sbjct: 340 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---I 396
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P++ TF GVL+AC+H GLV +G+ + M K++G+ P I HYGC+VDLLGRAGLL +A
Sbjct: 397 NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 456
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
++++S+ +P +W LLGACR H +V LGERV + L+EL+ Q SG Y LL N+Y+ G
Sbjct: 457 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 516
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGL-KGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
WE+V E+R+ M E+G++TTPG S I L +G VH+F++ D SHP++ +IYQMLD++ ++L
Sbjct: 517 RWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 576
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
++ GY + + L ++ EEK A+ HSEKLAI FG++ T PGTTIR+ KNLR+C DCH
Sbjct: 577 QMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCH 636
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ K++S VYNRE+I+RDR+R+HHFR G CSC D+W
Sbjct: 637 SATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 51/320 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ ++ P + L+ +M N + +K C + G+Q+HA +++ G
Sbjct: 108 MIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHG 167
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
D ++++ + +Y++F + EA ++ D+ + D V WN +I Y+R A LF
Sbjct: 168 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 227
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + PD S ++ N++I+ +S
Sbjct: 228 EGM--------PDR--------------------------------SMISTWNAMISGFS 247
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG + +A E F M E+D +SWSAMI G G +A+E F MQ+ + P
Sbjct: 248 RCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPS 307
Query: 240 VLSACSHCGLVDEGM---MFLDRMSKDF-GILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
VLSAC++ G +D+G + R S G+L +VD+ + G +D A+++
Sbjct: 308 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT-----SLVDMYAKCGRIDLAWEVFEK 362
Query: 296 MGVKPDSTIWRTLLGACRIH 315
M K S+ W ++G +H
Sbjct: 363 MSNKEVSS-WNAMIGGLAMH 381
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E +F +M++++I F + C +L G IH R+
Sbjct: 273 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 332
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
QLD L T+L+D+Y+ + A ++F+++ ++ +WN +I + R DA+ LF
Sbjct: 333 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 392
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
++ P+++T + VL ACAH G ++ G I + E+G ++ ++ +
Sbjct: 393 KMD-----INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 447
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A +V +P E W A++ +G+
Sbjct: 448 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 483
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 121/304 (39%), Gaps = 19/304 (6%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCG-----SLGMAFEVFKGMPEKDVVSWSAMIS 207
++ H I G+ + SL+ Y+ S + VF + + +V W+ MI
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
N AI + M A P+ T+ VL ACS G+V EG+ + K G+
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK-HGLG 169
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ H + + G L +A +++ G + D+ W ++ V + E
Sbjct: 170 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEG 229
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
+ + + + +++ +S G E +E + M E+ I ++ ++
Sbjct: 230 MPDRSMIST--WNAMISGFSRCGMVEVAREFFDEMKER--------DEISWSAMIDGYIQ 279
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF-G 446
+ + +QM E + K + + S NLGA ++G + ++++ +I G
Sbjct: 280 EGCFMEALEIFHQMQKEKIRPRKFV--LPSVLSACANLGALDQGRWIHTYAKRNSIQLDG 337
Query: 447 VLAT 450
VL T
Sbjct: 338 VLGT 341
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/507 (43%), Positives = 313/507 (61%), Gaps = 13/507 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A S EE LF+ M ++ N + + I C +C L G AR++ D
Sbjct: 82 MISALSKHGYVEEARNLFDNMTER----NSCSWNSMITC---YCKL--GDINSARLMFDC 132
Query: 61 YQL-DSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCL 118
+ D ++D Y ++ A +LF + R++V WN +IS Y++ A+ +
Sbjct: 133 NPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISM 192
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E KP +VT + +L ACAHLGAL+ GE IH YI + L N+LI MY
Sbjct: 193 FQQMQSEN--VKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMY 250
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCG+L A +VF G+ K++ W+++I GL MNG G +AI +F M++ G+ PD TF
Sbjct: 251 CKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFV 310
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LS CSH GL+ G + M +G+ P + HYGC+VDLLGRAG L +A +LI +M +
Sbjct: 311 GILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPM 370
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KP+S + +LL AC+IHK LGE+V + L+EL + G+YV L NLY+S+ W+ V
Sbjct: 371 KPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTC 430
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M ++G+ TPGCS+I + +VHEFV D SHP+ +I LDEI K+LK G+V
Sbjct: 431 RKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNT 490
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH++ EEK A+ YHSE++A+AFG+++TPPG TIRV KNLR C DCH+ K++S
Sbjct: 491 ANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNA 550
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+ RE+I+RDR RFHHFR G CSCNDYW
Sbjct: 551 FKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 153/376 (40%), Gaps = 52/376 (13%)
Query: 30 PFACSFAIKCCMKFCSLMGGLQI----HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
P SF++ ++ C++ G Q+ H ++++ G++ D L T L+D Y+ A
Sbjct: 8 PSKTSFSL--ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F +P+RD VA N +IS ++ +A LFDN+ S +TC L
Sbjct: 66 RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINS 125
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSA 204
+ + +S N++I Y K L A E+F M ++ V+W+
Sbjct: 126 ARLMFDCNPVKDVVS----------WNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNT 175
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD-----EGMMFLDR 259
MIS G AI F MQ V P + T +LSAC+H G +D G + R
Sbjct: 176 MISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 235
Query: 260 MSKDF-------------GIL------------PNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+ D G L NI + ++ LG G ++A
Sbjct: 236 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 295
Query: 295 SM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG--DYVLLLNLYSSV 349
M G+KPD + +L C ++ G+R ++ + E G Y +++L
Sbjct: 296 VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRA 355
Query: 350 GDWEKVKELREFMNEK 365
G ++ EL M K
Sbjct: 356 GYLKEALELIRAMPMK 371
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/507 (41%), Positives = 319/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + +E LF++M + + + + C + S+ G Q+H+ + G
Sbjct: 206 MISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG 265
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLY + AC LF+ + +D ++WN LI Y ++AL LF
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 325
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L +L ACAHLGA+E G IH YI++ G + + SLI MY
Sbjct: 326 EMLR--SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMY 383
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF + + + SW+AMI G AM+G A + F M++ + PDD TF
Sbjct: 384 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 443
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M +D+ I P + HYGC++DLLG +GL +A ++I +M +
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 503
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC+++ +V LGE ++LI+++ + G YVLL N+Y++ G W +V ++
Sbjct: 504 EPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 563
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 624 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 684 YKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 174/347 (50%), Gaps = 35/347 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P YL+ M + N + F +K C K + G QIH VL+ G
Sbjct: 74 MFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 133
Query: 61 YQLDSQLMTTLMDLY----------STFEKS---------------------FEACKLFD 89
Y LD + T+L+ +Y F++S A K+FD
Sbjct: 134 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 193
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y ++AL LF + + + +PD+ T + V+ ACA ++
Sbjct: 194 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK--TNVRPDESTMVSVVSACAQSASI 251
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N+LI +Y KCG + A +F+G+ KDV+SW+ +I G
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 311
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-GILP 268
++A+ F M R+G P+D T +L AC+H G ++ G ++K G+
Sbjct: 312 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 371
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
H ++D+ + G ++ A Q+ S+ + S+ W ++ +H
Sbjct: 372 ASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS-WNAMIFGFAMH 417
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/505 (40%), Positives = 312/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R + S EE F +M ++ + + + + C + L G +IHAR +DG
Sbjct: 302 MIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDG 361
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+++YS +A ++FD +P+RD V+W L+ Y + ++ F
Sbjct: 362 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFK 421
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ G K + +T + VL+AC++ AL++G++IH + + G + + + N+L++MY K
Sbjct: 422 QMLQQ--GVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFK 479
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF+GM +DVV+W+ +I GL NG G +A++ + M+ G+ P+ TF V
Sbjct: 480 CGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNV 539
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC C LV+EG MSKD+GI+P HY C+VD+L RAG L +A +I ++ +KP
Sbjct: 540 LSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKP 599
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LL ACRIH +V +GER EH ++L+ Q +G YV L +Y++ G W V +LR+
Sbjct: 600 SAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRK 659
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
FM E+G++ PG S I + G VH FV D SHPR EIY L+ + KQ+K GYV +
Sbjct: 660 FMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRF 719
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H+L E K A+ +HSEKLAIA+G+++TPPGT IR++KNLR+C DCH K +S +
Sbjct: 720 VMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITK 779
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFHHF+ G CSC DYW
Sbjct: 780 REIIARDAHRFHHFKNGECSCGDYW 804
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 4/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ +E F LF M+Q+R+ + F + C L G +IH RV+ G
Sbjct: 100 MISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D+ + L+ +Y+ +A ++FD + RD V+W L Y + ++L +
Sbjct: 160 LANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYH 219
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E +P +T + VL AC L ALE G++IH +I E Y S + + +L MY K
Sbjct: 220 AMLQER--VRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMK 277
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+ A EVF+ + +DV++W+ MI G +G +A +F M GV PD T+T V
Sbjct: 278 CGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTV 337
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+ G + G R +KD G++ ++ ++++ +AG + A Q+ M K
Sbjct: 338 LSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KR 395
Query: 301 DSTIWRTLLG 310
D W TLLG
Sbjct: 396 DVVSWTTLLG 405
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 186/404 (46%), Gaps = 54/404 (13%)
Query: 7 MSSSPEEGFY----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQ 62
M + ++G+Y + + + +K + + ++ C+K L G Q+H +LR G +
Sbjct: 1 MIPTGKDGWYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVK 60
Query: 63 LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
+ + TL+ LY+ EA +LFD+ + V+WNV+IS Y ++A LF +
Sbjct: 61 PNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLM 120
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
+E +PD T + +L AC+ L +G +IH + E G + + N+LI+MY+KCG
Sbjct: 121 QQER--LEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCG 178
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
S+ A VF M +D VSW+ + A +G+G ++++++ AM + V P T+ VLS
Sbjct: 179 SVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLS 238
Query: 243 ACSHCGLVDEGMMF------------------LDRMSKDFGILPNIHH------------ 272
AC +++G L +M G +
Sbjct: 239 ACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIA 298
Query: 273 YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ ++ +G L++A+ M GV PD + T+L AC + G+
Sbjct: 299 WNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGK------- 351
Query: 330 ELKAQESGDYVL--------LLNLYSSVGDWEKVKELREFMNEK 365
E+ A+ + D ++ L+N+YS G + +++ + M ++
Sbjct: 352 EIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 395
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/536 (40%), Positives = 314/536 (58%), Gaps = 37/536 (6%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+ S++ ++ F L+ ++ I N F S +K CS G IH VL+ G
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFS----SLLKSCSTKSGKLIHTHVLKFGL 157
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR--------------------------- 94
+D + T L+D+Y+ A K+FD +P+R
Sbjct: 158 GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 95 ----DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
D V+WNV+I Y ++ DAL LF L E KPD++T + L AC+ +GALE
Sbjct: 218 MCERDIVSWNVMIDGYAQHGFPNDALMLFQKL-LAEGKPKPDEITVVAALSACSQIGALE 276
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G IH ++ + +C LI MYSKCGSL A VF P KD+V+W+AMI+G A
Sbjct: 277 TGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 336
Query: 211 MNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
M+G+ +DA+ F MQ G+ P D TF G L AC+H GLV+EG+ + M +++GI P
Sbjct: 337 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+V LLGRAG L +AY+ I +M + DS +W ++LG+C++H LG+ + E+LI
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 456
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
L + SG YVLL N+Y+SVGD+E V ++R M EKG+ PG STI ++ VHEF D
Sbjct: 457 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGD 516
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H + EIY ML +I++++K GYV + L +L EK +L HSE+LAIA+G+++
Sbjct: 517 REHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIS 576
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PG+ +++ KNLR+C DCH K++S + R++++RDR RFHHF +G CSC D+W
Sbjct: 577 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/507 (42%), Positives = 315/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y S EE F +M++ + N + C S G I + V +G
Sbjct: 234 MISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG 293
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + QL L+D+Y ++ A +LFD I ++D ++WN +I Y +AL LF+
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ R S KP+DVT L +L ACA LGAL+ G+ +H YI ++ S +L SLI MY+
Sbjct: 354 VMLR--SNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYA 411
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFT 238
KCG + A VF+ M +++ SW+AM+SG AM+GH A+ F M G+F PDD TF
Sbjct: 412 KCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFV 471
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+ GLVD G + M +D+GI P + HYGC++DLL RA ++A L+ +M +
Sbjct: 472 GVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEM 531
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC+ H V GE V E L +L+ + +G +VLL N+Y+ G W+ V +
Sbjct: 532 EPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARI 591
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGC++I + G VHEF+V D HP N IY+ML+E++K L+ G+V
Sbjct: 592 RTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNT 651
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E K ALS HSEKLAI+FG++ T PGTTIR+ KNLR+C +CH+ K++S +
Sbjct: 652 SEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKI 711
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+NRE+I RDR RFHHF++G CSCND W
Sbjct: 712 FNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 177/349 (50%), Gaps = 34/349 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS+SSSP +LF +M + N F K C K + G Q+HA L+
Sbjct: 102 LIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLA 161
Query: 61 YQLDSQLMTTLMDLYST----------FEKSF---------------------EACKLFD 89
+ + T+++ +Y++ F+KS +A +LFD
Sbjct: 162 LHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFD 221
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y+++ R +A+ F + +E+ P+ T ++VL AC H +
Sbjct: 222 EIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM--QEANVLPNKSTMVVVLSACGHTRSG 279
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G+ I ++ ++G+GS + L N+LI MY KCG +A E+F G+ EKDV+SW+ MI G
Sbjct: 280 ELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGY 339
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+ +A+ F M R+ V P+D TF G+L AC+ G +D G + K+ N
Sbjct: 340 SYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSN 399
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ ++D+ + G ++ A ++ SM + ++ W +L +H H
Sbjct: 400 ASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS-WNAMLSGFAMHGHA 447
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/536 (39%), Positives = 320/536 (59%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+R +S S P++ F+ + + ++ + + F +K C + SL G+Q H +++R G
Sbjct: 84 FIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHG 143
Query: 61 YQLDSQLMTTLMDLYST----------------------------FEKSFE---ACKLFD 89
+ D + +L+ +YST + KS + A KLFD
Sbjct: 144 FDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFD 203
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++P+++ V W+V+IS Y +N A+ L+ L E G ++ + V+ +CAHLGAL
Sbjct: 204 KMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSE--GVHANETVMVSVIASCAHLGAL 261
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E GE+ H YI + + L +L+ MY++CGS+ A VF +P +D +SW+ +I+G
Sbjct: 262 ELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGF 321
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G+ A+E F M++AG+ P + TFT VLSACSH GLV+ G+ + M +D+ I P
Sbjct: 322 AMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPR 381
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VDLLGRAG L +A + + M +KP++ IW LLGACRIHK+ + ER + LI
Sbjct: 382 LEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLI 441
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
ELK + SG YVLL N+Y+ WE V+ +R+ M E+G+ PG + + G VH+F + D
Sbjct: 442 ELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGD 501
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
+HP I +I +M +EI ++++AGY L ++ EEK + + HSEKLAIA+ ++
Sbjct: 502 KTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMR 561
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T IR+ KNLR+C DCH K++S VY RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 562 TKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 41 MKFCSLMGGLQI-HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
++ C+ + L+I HA ++R D + L+ + A ++F +I + +
Sbjct: 22 LESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIY 81
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N I + ++ + + + + +G PD++T +++AC G+L+ G + H I
Sbjct: 82 NSFIRGFSGSKDPDKSFHFY--VQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQI 139
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA--------------- 204
HG+ S + + NSL+ MYS G + A VF+ + DVVSW++
Sbjct: 140 IRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSAR 199
Query: 205 ----------------MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
MISG A N AIE + +Q GV ++ V+++C+H G
Sbjct: 200 KLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLG 259
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
++ G D + ++ + N+ +VD+ R G +D+A + + + D+ W TL
Sbjct: 260 ALELGERAHDYILRN-KMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGR-DALSWTTL 317
Query: 309 LGACRIHKHVTLGERVIEHL 328
+ +H + E+ +E+
Sbjct: 318 IAGFAMHGY---AEKALEYF 334
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 318/537 (59%), Gaps = 33/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + SP++ LF+KM + + + + C K +L G Q+ + + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFD------------------------------- 89
++ L ++D+Y+ +A +LFD
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+PQ+D VAWN LIS Y +N + +AL +F L +++ K + +T + L ACA +GAL
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN-MKLNQITLVSTLSACAQVGAL 381
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G IH YI +HG ++ ++LI MYSKCG L + EVF + ++DV WSAMI GL
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G G +A++ F MQ A V P+ TFT V ACSH GLVDE +M ++GI+P
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HY C+VD+LGR+G L++A + I +M + P +++W LLGAC+IH ++ L E L+
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 561
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ + G +VLL N+Y+ +G WE V ELR+ M GL+ PGCS+I + G++HEF+ D
Sbjct: 562 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 621
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVL 448
+HP ++Y L E+ ++LK GY EI+ L + EE K +L+ HSEKLAI +G++
Sbjct: 622 NAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 681
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+T IRV KNLR+C DCH+ AK++S +Y+RE+I+RDR RFHHFR G+CSCND+W
Sbjct: 682 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 37/348 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RAY+ P + F M + + N + F IK + SL G +H ++
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
D + +L+ Y + ACK+F I ++D V+WN +I+ +++ AL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E+ K VT + VL ACA + LEFG ++ YI E+ + L N+++ MY+
Sbjct: 221 KKMESED--VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 180 KCGSL-------------------------------GMAFEVFKGMPEKDVVSWSAMISG 208
KCGS+ A EV MP+KD+V+W+A+IS
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQ-TFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
NG +A+ F +Q +Q T LSAC+ G ++ G ++ K GI
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIR 397
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
N H ++ + + G L+++ ++ S+ K D +W ++G +H
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 5/304 (1%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL--MDLYSTFEKSFEA 84
PT S I + SL Q H ++R G D + L M S+F A
Sbjct: 24 PTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYA 83
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
K+FDEIP+ ++ AWN LI Y ++ F ++ ES C P+ T +++A A
Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDM-VSESQCYPNKYTFPFLIKAAA 142
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
+ +L G+ +H + GS + + NSLI Y CG L A +VF + EKDVVSW++
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
MI+G G A+E F M+ V T GVLSAC+ ++ G + ++
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN- 261
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
+ N+ ++D+ + G ++ A +L +M K D+ W T+L I + V
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREV 320
Query: 325 IEHL 328
+ +
Sbjct: 321 LNSM 324
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 313/516 (60%), Gaps = 33/516 (6%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
MR + + F CSF +K C+K ++ G IH + G+ + L +++LY +
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 81 SFEACKLFDEIPQRDTVAWNV-------------------------------LISCYIRN 109
+A LF+++PQRD V WN+ +IS +++
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ +A+ LF L E+ +P++VT + VL ACA LG L+ G +H Y ++ G+ ++
Sbjct: 121 GKPNEAIDLFMKL--EDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVH 178
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+CN+LI MY KCG L A VF M E+ VVSWSAMI+GLAM+G +A+ F M + G
Sbjct: 179 VCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG 238
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V P+ TF G+L ACSH GL+DEG F M+ D+G++P I HYGCVVDL RAGLL++A
Sbjct: 239 VKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEA 298
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
++ I SM +KP+ +W LLG C++HK++ L E I+HL EL G YV++ N+Y+
Sbjct: 299 HEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEA 358
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
WE +R+ M ++G++ T G S+I + GVVHEFV D +HP+ +I ++ D++ ++
Sbjct: 359 ERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKM 418
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
K GY + + L ++ +EK L HSEKLA+ FG++ TP GT IR+ KNLR+C DCH
Sbjct: 419 KRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCH 478
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++SG+ +RE+I+RDR RFH FR+G+CSC D+W
Sbjct: 479 AALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + P E LF K+ + + N + C L G +H + G
Sbjct: 113 MISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + TL+D+Y A ++F E+ +R V+W+ +I+ + + +ALCLF
Sbjct: 173 FKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ + G KP+ VT + +L AC+H+G ++ G + ++ ++G ++ ++ ++S
Sbjct: 233 EMIK--LGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFS 290
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A E MP K + V W A++ G
Sbjct: 291 RAGLLEEAHEFILSMPIKPNGVVWGALLGG 320
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/534 (41%), Positives = 318/534 (59%), Gaps = 47/534 (8%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY- 75
+E M + + N F +K C K + G QIH L+ G+ D +M+ L+ +Y
Sbjct: 115 FYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYV 174
Query: 76 --------------STFEKSFEA--------------------------CK----LFDEI 91
+ EK CK LFD++
Sbjct: 175 MCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKM 234
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
QR V+WN +IS Y N +DA+ +F + + + +P+ VT + VL A + LG+LE
Sbjct: 235 RQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD--IRPNYVTLVSVLPAISRLGSLEL 292
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
GE +H Y + G L ++LI MYSKCG + A VF+ +P ++V++WSAMI+G A+
Sbjct: 293 GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAI 352
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+G DAI+ F M++AGV P D + +L+ACSH GLV+EG + +M G+ P I
Sbjct: 353 HGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIE 412
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HYGC+VDLLGR+GLLD+A + I +M +KPD IW+ LLGACR+ +V +G+RV L+++
Sbjct: 413 HYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+SG YV L N+Y+S G+W +V E+R M EK ++ PGCS I + GV+HEFVV+D S
Sbjct: 473 VPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDS 532
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
HP+ EI ML EI+ +L++AGY T L NL E+K N L YHSEK+A AFG+++T
Sbjct: 533 HPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTS 592
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
PG IR+ KNLRIC DCH+ K++S VY R++ +RDR RFHHF++G CSC DYW
Sbjct: 593 PGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 143/316 (45%), Gaps = 54/316 (17%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE----ACKLFDEIPQRDTVAWNVLISCY 106
QIHA ++ G D+ ++ +T + A K+F+++PQR+ +WN +I +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 107 IRNQRTRD--ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ + A+ LF + +E +P+ T VL+ACA G ++ G++IH ++G+
Sbjct: 101 SESDEDKALIAITLFYEMMSDEF-VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKD------------------------- 198
G + ++L+ MY CG + A +F K + EKD
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 199 -------------------VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
VVSW+ MISG ++NG +DA+E F M++ + P+ T
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL A S G ++ G +L ++D GI + ++D+ + G++++A + + +
Sbjct: 280 VLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP-R 337
Query: 300 PDSTIWRTLLGACRIH 315
+ W ++ IH
Sbjct: 338 ENVITWSAMINGFAIH 353
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS++ ++ +F +M++ I N + + SL G +H G
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D L + L+D+YS +A +F+ +P+ + + W+ +I+ + + + DA+ F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ ++G +P DV + +L AC+H G +E G + + +S G ++ ++ +
Sbjct: 365 KM--RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ G L A E MP K D V W A++ M G+
Sbjct: 423 RSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/538 (39%), Positives = 323/538 (60%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+RAYS S +P + F + K+ Q +P + +F ++ C + + G +H +++
Sbjct: 80 MIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SACEAGPAVHGALIK 138
Query: 59 DGYQLDSQLMTTLMDLY------STFEKSFEACK-------------------------L 87
G++ D + + L+ +Y S+ + FE+ + L
Sbjct: 139 HGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNL 198
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FD +PQRD V+WN +I+ Y + ++R+AL LF + + G K ++V+ + V+ AC HLG
Sbjct: 199 FDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMD--GVKVNEVSMISVVTACTHLG 256
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
AL+ G+ H YI ++ +NL +L+ MY KCG++ A +VF M EK+V +WS I
Sbjct: 257 ALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIG 316
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GLAMNG+G+ +E F M+ G+ P++ TF VL CS G VDEG D M +D GI
Sbjct: 317 GLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIE 376
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + HYGC+VDL GRAG L++A I +M +KP + W LL ACR++K++ LGE
Sbjct: 377 PRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRK 436
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
LIE++ + G YV L N+Y+ G+W++V +R+ M +G+ PGCS + + G VHEF
Sbjct: 437 LIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFS 496
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHP + I M EI+K+LK+AGYVA S L ++ EEK +AL HSEK+AIAFG+
Sbjct: 497 GDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGL 556
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ G IR+ KNLRIC DCH+ +K++S ++ RE+I+RDR RFHHF++G CSC D+W
Sbjct: 557 FSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 144/317 (45%), Gaps = 39/317 (12%)
Query: 43 FCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTVAWN 100
F +L QIH +++ +G + +L+ + + + + ++ D+ + A N
Sbjct: 19 FITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALN 78
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
+I Y ++ + ++ + + PD+ T +++ CA A E G +H +
Sbjct: 79 SMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SACEAGPAVHGALI 137
Query: 161 EHGYGSKMNLCNSLIAMY-------------------------------SKCGSLGMAFE 189
+HG+ ++ + LI MY +KCG +G A
Sbjct: 138 KHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARN 197
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F MP++D VSW+AMI+G A G R+A+ F MQ GV ++ + V++AC+H G
Sbjct: 198 LFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGA 257
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+D+G + K+ I ++ +VD+ + G +D+A ++ M K T W T +
Sbjct: 258 LDQGKWAHAYIEKN-KIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYT-WSTAI 315
Query: 310 GACRIHKHVTLGERVIE 326
G ++ + G++ +E
Sbjct: 316 GGLAMNGY---GQKCLE 329
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 318/510 (62%), Gaps = 12/510 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + S+ P L R++ P + ++ C + +L G +HA ++G
Sbjct: 94 VLRIAASSAHPRIALALH---RRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNG 150
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
+ +L+ Y A ++FDEIP +R+ V+WN +++ + N R + L +
Sbjct: 151 LVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTI 210
Query: 119 FDNLNRE--ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F RE E+ PD T + VL ACA +GAL G ++H + S+ G ++ N+LI
Sbjct: 211 F----RETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALID 266
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
+Y+KCG + A++VF+ M + VVSW+++I GLA NG G+DA+E FG M+R + P D
Sbjct: 267 LYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDI 326
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T GVL ACSHCGLVD+G + + M +GI P I H GC+VDLLGRAG +++A+ IT+
Sbjct: 327 TMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITT 386
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M V+P++ +WRTLLGAC +HK + LGE L+EL SGDYVLL NLY++VG W
Sbjct: 387 MPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADA 446
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
LR+ M G++ PG S + L+ V+EFV+ D SHP ++IYQ L EI ++L+ GYV
Sbjct: 447 HVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYV 506
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
++ L ++ EEK AL+YHSE+LAIAF +L + PG+ IR+ KNLR+C DCH K++
Sbjct: 507 PRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHLVIKLI 566
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S VY+RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 567 SKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/505 (43%), Positives = 308/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y + Y+F M + I + +K + C G IH V++ G
Sbjct: 60 MIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMG 119
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D T L+ LY T +A +LFDE+P+R+ V WN LI+ Y N++ A+ F
Sbjct: 120 FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFR 179
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G +P + T ++VL AC+HLGA G+ IH +I + + + +LI MY+K
Sbjct: 180 GMLAD--GAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ +VF+ + EK+V +W+ +ISG AMNG G A+++F M PD+ TF GV
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GLV EG M + FG+ P I HYGC+VDLLGRAGLL++A +LI SM ++P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IWR LL ACR+H + LGE +I+ LIEL+ +YVLL N+YS W +V +LR
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M+ +G++ PGCS+I + VV+EFV + P IY+ LD + K+LK GYV
Sbjct: 418 MMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDM 477
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+++ EEK +++ YHSEKLA+AFG+L +P T+R+ KNLRIC+DCH F KVLS VY
Sbjct: 478 ALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYK 537
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +++RDR RFHHF EG CSC DYW
Sbjct: 538 RYIVVRDRNRFHHFYEGFCSCRDYW 562
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/511 (40%), Positives = 314/511 (61%), Gaps = 10/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP----FACSFAIKCCMKFCSLMGGLQIHARV 56
M+RAYS + P + +LF M + PT+P F F +K C + G Q+H +
Sbjct: 65 MIRAYSQTPDPTQALHLFLSMLCQ--PTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLI 122
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ G + D + L+ +YS+ KS A K+F ++ RD V+W +I ++ + R +A+
Sbjct: 123 YKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAI 182
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF+ + E G +P++ T + VL+ACA GA+ G ++ I E G + N+ +LI
Sbjct: 183 RLFEEM--VEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALID 240
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCGS+G A +VF G+ KDV +W+AMISGLA +G +A+ F M+ G+ PD++T
Sbjct: 241 MYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERT 300
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
T VLSAC + G EG + + M +GI P I HYGC+VDLL R G LD+A + I M
Sbjct: 301 MTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKM 360
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEH--LIELKAQESGDYVLLLNLYSSVGDWEK 354
++PD +WRTL+ A ++H + E++++ L+++ + + G YVLL N+Y+S G W
Sbjct: 361 PIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHD 420
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
++RE MN+KGL PGCS I + G+VHEF D H +IY LDE+ ++LK GY
Sbjct: 421 KAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGY 480
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+++ L + +EK L +HSEKLA+AFG++ T PGT IR+ KNLR C DCH+ K+
Sbjct: 481 HPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKL 540
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S +Y +++I+RDR+RFHHF G CSC DYW
Sbjct: 541 ISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/511 (41%), Positives = 312/511 (61%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y + EE LF++M + + + + C + S+ G Q+H+ V
Sbjct: 167 MITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDD 226
Query: 59 --DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
G+ +++ L+DLYS A LF+ + +D V+WN LI Y ++AL
Sbjct: 227 DDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEAL 286
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSL 174
LF + R SG P+DVT L VL ACAHLGA++ G IH YI + G ++ +L SL
Sbjct: 287 LLFQEMLR--SGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSL 344
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I MY+KCG + A +VF M + + SW+AMI G AM+G A + F M+ V PDD
Sbjct: 345 IDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDD 404
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF G+LSACSH GL+D G M++D+ + P + HYGC++DLLG +GL +A ++I
Sbjct: 405 ITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIH 464
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+M ++PD IW +LL AC+ H ++ L E + LI+++ + SG YVLL N+Y++ G WE
Sbjct: 465 TMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWED 524
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +R +N KG++ PGCS+I + VVHEF++ D HPR EIY ML+E++ QL+ AG+
Sbjct: 525 VARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGF 584
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ + L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K+
Sbjct: 585 APDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 644
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S +Y RE++ RDR RFHHFR+G CSC DYW
Sbjct: 645 ISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 182/353 (51%), Gaps = 43/353 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R ++ SS P ++ +M N ++ F +K C K + G QIHA+VL+ G
Sbjct: 35 MLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLG 94
Query: 61 YQLDSQLMTTLMDLYS------TFEKSFEAC-------------------------KLFD 89
LD + T+L+ +Y+ K F+A K+FD
Sbjct: 95 CGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFD 154
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EI +RD V+WN +I+ Y+ N R +AL LF + R + +PD+ T + V+ ACA G++
Sbjct: 155 EITERDVVSWNAMITGYVENGRYEEALELFKEMMR--TNVRPDEGTLVSVVSACAQSGSI 212
Query: 150 EFGEKIHRYI----SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
E G ++H ++ +HG+ S + + N+LI +YSKCG + AF +F+G+ KDVVSW+ +
Sbjct: 213 ELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTL 272
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSK 262
I G ++A+ F M R+G P+D T VL AC+H G +D G +++D+ K
Sbjct: 273 IGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLK 332
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
G+ ++D+ + G ++ A+Q+ SM + S+ W ++ +H
Sbjct: 333 --GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS-WNAMIFGFAMH 382
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 52/333 (15%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+ I + + + WN ++ + + AL ++ + G P+ + +L++C
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMY--VRMVSLGHLPNSYSFPFLLKSC 74
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG---------- 193
A A E G +IH + + G G + SLI+MY++ G L A +VF
Sbjct: 75 AKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCT 134
Query: 194 ---------------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+ E+DVVSW+AMI+G NG +A+E F M R V P
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRP 194
Query: 233 DDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
D+ T V+SAC+ G ++ G ++D D G ++ ++DL + G ++ A
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS 348
+ L + K D W TL+G + H L + + E L++ E + V LL++ +
Sbjct: 255 FGLFEGLSCK-DVVSWNTLIGG---YTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 349 --------VGDWEKV---KELREFMNEKGLQTT 370
+G W V K+L+ NE L+T+
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTS 343
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/438 (46%), Positives = 282/438 (64%), Gaps = 2/438 (0%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+T ++ Y+ + EA LFD + +RD + WNV+I Y ++ + L LF + +
Sbjct: 9 LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQM--LNA 66
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+P++VT L VL AC GALE G +H YI +G G + + SLI MYSKCGSL A
Sbjct: 67 KVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDA 126
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VF+ + KDVV+W++M+ G AM+G +DA+ F M G P D TF GVL+ACSH
Sbjct: 127 RLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHA 186
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GLV EG F M ++GI P + HYGC+V+LLGRAG L++AY+L+ +M + D +W T
Sbjct: 187 GLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGT 246
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGACR+H ++ LGE++ E+L+ SG YVLL N+Y++ G+WE V +R M E G
Sbjct: 247 LLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGF 306
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PGCS+I + VHEF+ D+ HP+ EIY+ML+EIN LK GY + LH+L
Sbjct: 307 EKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLED 366
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
+K +L HSEKLA+AFG++ T PGTTI++ KNLR+C DCH K++S + R+V++RD
Sbjct: 367 AQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRD 426
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF G CSC DYW
Sbjct: 427 RNRFHHFVNGLCSCGDYW 444
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ P EG LF +M ++ N + C + +L G +H+ + +G
Sbjct: 43 MIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNG 102
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ ++ T+L+D+YS +A +F+ I +D VAWN ++ Y + ++DAL LF
Sbjct: 103 IGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFK 162
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ G +P D+T + VL AC+H G + G K + E+G K+ ++ +
Sbjct: 163 EMCM--IGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLG 220
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A+E+ K M ++D V W ++ ++G+
Sbjct: 221 RAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGN 256
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/535 (40%), Positives = 311/535 (58%), Gaps = 30/535 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R +S S PE L+++M P N + +K C +L QIHA++ + G
Sbjct: 115 MIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLG 174
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D + +L++ Y+ A LFD IP+ D V+WN +I Y + + AL LF
Sbjct: 175 YENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFR 234
Query: 121 NL-----------------------------NREESGCKPDDVTCLLVLQACAHLGALEF 151
+ + S +PD+V+ L ACA LGALE
Sbjct: 235 KMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 294
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G+ IH Y+++ L LI MY+KCG +G A EVFK + K V +W+A+ISG A
Sbjct: 295 GKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAY 354
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+GHGR+AI F MQ+ G+ P+ TFT VL+ACS+ GLV+EG + M +D+ + P I
Sbjct: 355 HGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIE 414
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HYGCVVDLL RAGLLD+A + I M +KP++ IW LL ACRIHK++ LGE + E LI +
Sbjct: 415 HYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 474
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
G YV N+++ W+K E R M E+G+ PGCSTI L+G HEF+ D S
Sbjct: 475 DPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 534
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY-HSEKLAIAFGVLAT 450
HP I +I + ++L+ GYV E+ L +L +++ + + HSEKLAI +G++ T
Sbjct: 535 HPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKT 594
Query: 451 PPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
PGTTIR+ KNLR+C DCH K++S +Y R++++RDR RFHHFR+G+CSC DYW
Sbjct: 595 KPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 45/318 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMD--LYSTFEKSFEACKL-FDEIPQRDTVAWNVLISCYI 107
QIHAR+L+ G DS +T + + ST ++ FD + DT WN++I +
Sbjct: 61 QIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 120
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDV-TCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
+ +L L+ R P + T +L+AC++L ALE +IH I++ GY +
Sbjct: 121 CSDEPERSLLLY---QRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 167 KMNLCNSLIAM-------------------------------YSKCGSLGMAFEVFKGMP 195
+ NSLI Y+K G + +A +F+ M
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
EK+ +SW+ MISG G ++A++ F MQ + V PD+ + LSAC+ G +++G
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 256 FLDRMSKDFGILPNIHHYGCV-VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
++K + ++ GCV +D+ + G + +A ++ ++ K W L+
Sbjct: 298 IHSYLTKTRIRMDSV--LGCVLIDMYAKCGDMGEALEVFKNIQRK-SVQAWTALISGYAY 354
Query: 315 HKHVTLGERVIEHLIELK 332
H H G I +E++
Sbjct: 355 HGH---GREAISKFMEMQ 369
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 315/508 (62%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + P E L++KM + + + + C + L G+++H+ +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L + L+++Y+ A ++FD++ +D AW+ LI Y++N R+ +AL LF
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF- 269
Query: 121 NLNREESG---CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
RE +G +P++VT L V+ ACA LG LE G +H YI+ G ++L NSLI M
Sbjct: 270 ---REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDM 326
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+SKCG + A +F M KD++SW++M++GLA++G GR+A+ F MQ + PD+ TF
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITF 386
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVL+ACSH GLV EG + +G+ HYGC+VDLL RAGLL +A + I M
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++PD IW ++LGACR++ ++ LGE L+EL+ G Y+LL N+Y+ W +VK+
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKK 506
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+RE MNEKG+Q TPGCS++ + + H F+ D SHP I EI ML ++ ++LK+ GYVA+
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVAD 566
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L N+ +K ++S HSEKLA+ +G+L + G I + KNLR+C DCH K++S
Sbjct: 567 TSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSK 626
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y R++ +RDR RFHHF++G CSC DYW
Sbjct: 627 IYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 159/321 (49%), Gaps = 14/321 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+RA+ S+ P + +M R + +P + F +K C G +H +V++
Sbjct: 49 MLRAFVNSNMPRRALQSYTEMLERSRNVP-DRFTFPSLLKGCALLLEFKVGKVLHGQVVK 107
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D + TTL+++Y+ A LF+ + R+ V W +IS Y++N +AL L
Sbjct: 108 YMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLL 167
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ + EE G PD+VT ++ ACA L L G K+H +I E L ++L+ MY
Sbjct: 168 YKKM--EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMY 225
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTF 237
+KCG L A +VF + +KDV +WSA+I G N +A++ F + + + P++ T
Sbjct: 226 AKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTI 285
Query: 238 TGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
V+SAC+ G ++ G ++ R K + N ++D+ + G +D A ++
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN----NSLIDMFSKCGDIDAAKRIFD 341
Query: 295 SMGVKPDSTIWRTLLGACRIH 315
SM K D W +++ +H
Sbjct: 342 SMSYK-DLISWNSMVNGLALH 361
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 5/227 (2%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F D + WN ++ ++ + R AL + + E S PD T +L+ C
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEM-LERSRNVPDRFTFPSLLKGC 89
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L + G+ +H + ++ S + + +L+ MY+ CG L A +F+ M ++ V W+
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK- 262
+MISG N +A+ + M+ G PD+ T ++SAC+ + GM + +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
D I + +V++ + G L A Q+ + K D W L+
Sbjct: 210 DMKICAVLG--SALVNMYAKCGDLKTARQVFDQLSDK-DVYAWSALI 253
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 41/233 (17%)
Query: 172 NSLIAMYSKCGSLGM--AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRA 228
N LIA GSLG+ A+ VF DV++W++M+ + R A++S+ M +R+
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 229 GVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGILPN-IHHYGCVVDLLGR 282
PD TF +L C+ G V G + + D I ++ Y DL
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 283 AGLLDQA---------------------------YQLITSMGVKPDSTIWRTLLGACRIH 315
L ++ Y+ + G PD TL+ AC
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 316 KHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
K + +G ++ H+ E+ + VL L+N+Y+ GD + +++ + +++K
Sbjct: 194 KDLGVGMKLHSHIREMDMKICA--VLGSALVNMYAKCGDLKTARQVFDQLSDK 244
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/538 (39%), Positives = 322/538 (59%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGF-YLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R S S +PE F Y + +R +P N F +K C + + G+Q H + ++
Sbjct: 88 LIRGCSTSENPENSFHYYIKALRFGLLPDN-ITHPFLVKACAQLENAPMGMQTHGQAIKH 146
Query: 60 GYQLDSQLMTTLMDLY----------STFEK---------------------SFEACKLF 88
G++ D + +L+ +Y S F++ + A +LF
Sbjct: 147 GFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELF 206
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D +P+R+ V W+ +IS Y RN A+ F+ L E G ++ + V+ +CAHLGA
Sbjct: 207 DRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAE--GVVANETVMVGVISSCAHLGA 264
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L GEK H Y+ + + L +++ MY++CG++ A VF+ +PEKDV+ W+A+I+G
Sbjct: 265 LAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAG 324
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LAM+G+ A+ F M + G P D TFT VL+ACSH G+V+ G+ + M +D G+ P
Sbjct: 325 LAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEP 384
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ HYGC+VDLLGRAG L +A + + M VKP++ IWR LLGACRIHK+V +GERV + L
Sbjct: 385 RLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKIL 444
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
+E++ + SG YVLL N+Y+ W+ V +R+ M +KG++ PG S I + G VHEF +
Sbjct: 445 LEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIG 504
Query: 389 DVSHPRINEIYQMLDEIN-KQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D +HP I +I ++ ++I ++K+AGYV + ++ EEK AL HSEKLAIA+G+
Sbjct: 505 DKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGI 564
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ T IR+ KNLR+C DCH K++S V+ E+I+RDR RFHHF+EG CSC DYW
Sbjct: 565 MKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 41/299 (13%)
Query: 52 IHARVLRDGYQLD----SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
IHA +LR D S+L+ +D ST A ++ +I + +N LI
Sbjct: 36 IHAHMLRTHLFFDVFAASRLIAFCID--STTNLLHYAIRVASQIQNPNLFIYNALIRGCS 93
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
++ ++ + R G PD++T +++ACA L G + H +HG+
Sbjct: 94 TSENPENSFHYYIKALR--FGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQD 151
Query: 168 MNLCNSLIAMYS-------------------------------KCGSLGMAFEVFKGMPE 196
+ NSL+ MY+ +CG A E+F MPE
Sbjct: 152 FYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPE 211
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+++V+WS MISG A N A+E+F A+Q GV ++ GV+S+C+H G + G
Sbjct: 212 RNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKA 271
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + ++ L N+ VVD+ R G +++A + + K D W L+ +H
Sbjct: 272 HEYVMRNKLSL-NLILGTAVVDMYARCGNVEKAVMVFEQLPEK-DVLCWTALIAGLAMH 328
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/536 (39%), Positives = 317/536 (59%), Gaps = 37/536 (6%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+ S++ ++ F L+ ++ +I N F S +K CS G IH VL+ G
Sbjct: 100 INTASINGLKDQAFLLYVQLLSSQINPNEFTFS----SILKSCSTKSGKLIHTHVLKFGL 155
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR--------------------------- 94
LD + T L+D+Y+ A K+FD +P+R
Sbjct: 156 GLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDR 215
Query: 95 ----DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
D V+WNV+I Y ++ DAL LF L + KPD++T + L AC+ +GALE
Sbjct: 216 MCERDIVSWNVMIDGYSQHGFPSDALMLFQKL-LADGKPKPDEITVVAALSACSQIGALE 274
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G IH +++ + +C +LI MYSKCGSL A VF P KD+V+W+AMI+G A
Sbjct: 275 TGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYA 334
Query: 211 MNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
M+G+ +DA+ F MQ G+ P D TF G L AC+H GLV+EG+ + M +++GI P
Sbjct: 335 MHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPK 394
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+V LLGRAG L +AY++I +M ++ DS +W ++LG+C++H LG+ + E+LI
Sbjct: 395 IEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLI 454
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
SG YVLL N+Y+ VGD+E V ++R M EKG+ PG STI + VHEF D
Sbjct: 455 GQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGD 514
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H + EIY ML ++++++K GYV + LH+L EK +L HSE+LAIA+G+++
Sbjct: 515 REHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLIS 574
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PG+ +++ KNLR+C DCH K++S + R++++RDR RFHHF +G CSC+D+W
Sbjct: 575 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ YS P + LF+K+ P + A+ C + +L G IH V
Sbjct: 227 MIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSS 286
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+L+ ++ T L+D+YS EA +F++ P++D VAWN +I+ Y + ++DAL LF
Sbjct: 287 RIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLF 346
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMY 178
D + + +G +P D+T + LQACAH G + G +I + E+G K+ L+++
Sbjct: 347 DEM-QGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLL 405
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G L A+E+ K M E D V WS+++ ++G
Sbjct: 406 GRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHG 441
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/495 (42%), Positives = 306/495 (61%), Gaps = 4/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE +F +M ++ + + + +K C + G Q H ++ G + TL
Sbjct: 120 EEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTL 179
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+++Y+ A +FD + V++N +I+ +R+ +AL LF + + G KP
Sbjct: 180 INMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREM--QAKGLKP 237
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
VT + VL ACA LGALE G IH YI + S + + +LI MY+KCGSL A VF
Sbjct: 238 TSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVF 297
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ M +D +WS M+ A +G+GR+AI F M++ G+ PDD TF GVL ACSH G+V
Sbjct: 298 QDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVS 357
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG+ + D M +++GI+ I HYGCV DLL R+G L++AY+ I + +KP + +WRTLL A
Sbjct: 358 EGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSA 416
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C H V +G+RV E ++EL GDYV+ NL ++ G WE++ +R+ M+EKG+ P
Sbjct: 417 CAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVP 476
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEK 430
GCS+I + +VHEF D SHP E +M+DE+ +QLK+ GYV + H +G EEK
Sbjct: 477 GCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEK 536
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+L YHSEKLAI+FG+L T PGTT+R+ KNLR+C DCH+ AK++S V+NR +I+RD R
Sbjct: 537 ATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNR 596
Query: 491 FHHFREGRCSCNDYW 505
FHHF +G CSC DYW
Sbjct: 597 FHHFEDGVCSCGDYW 611
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 85/230 (36%), Gaps = 49/230 (21%)
Query: 184 LGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH----GRDAIESFGAMQRAGVFPDDQTFT 238
L A +VF +P DVV ++ ++ G A G +A F M GV PD TF
Sbjct: 83 LAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFV 142
Query: 239 GVLSAC-----------------------------------SHCGLVDEGMMFLDRMSKD 263
+L AC + CG V + DRM +
Sbjct: 143 SLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGE 202
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTL 320
+ Y ++ R+ L +A L M G+KP S ++L AC + + L
Sbjct: 203 CVV-----SYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALEL 257
Query: 321 GERVIEHLIELKAQESGDY-VLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
G + +++ +++ L+++Y+ G E + + M + Q
Sbjct: 258 GRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA 307
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/508 (40%), Positives = 315/508 (62%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + P E L++KM + + + + C + L G+++H+ +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L + L+++Y+ A ++FD++ +D AW+ LI Y++N R+ +AL LF
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF- 269
Query: 121 NLNREESG---CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
RE +G +P++VT L V+ ACA LG LE G +H YI+ G ++L NSLI M
Sbjct: 270 ---REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDM 326
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+SKCG + A +F M KD++SW++M++G A++G GR+A+ F MQ + PD+ TF
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITF 386
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVL+ACSH GLV EG + +G+ HYGC+VDLL RAGLL +A + I M
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++PD IW ++LGACR++ ++ LGE L++L+ G Y+LL N+Y+ W +VK+
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKK 506
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+RE MNEKG+Q TPGCS++ + + H F+ D SHP I EI ML ++ ++LK+AGYVA+
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVAD 566
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L N+ +K ++S HSEKLA+ +G+L + G I + KNLR+C DCH K++S
Sbjct: 567 TSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSK 626
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y R++ +RDR RFHHF++G CSC DYW
Sbjct: 627 IYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 159/321 (49%), Gaps = 14/321 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+RA+ S+ P + +M R + +P + F +K C G +H +V++
Sbjct: 49 MLRAFVNSNMPRRALQSYTEMLERSRNVP-DRFTFPSLLKGCALLLEFKVGKVLHGQVVK 107
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D + TTL+++Y+ A LF+ + R+ V W +IS Y++N +AL L
Sbjct: 108 YMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLL 167
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ + EE G PD+VT ++ ACA L L G K+H +I E L ++L+ MY
Sbjct: 168 YKKM--EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMY 225
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTF 237
+KCG L A +VF + +KDV +WSA+I G N +A++ F + + + P++ T
Sbjct: 226 AKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTI 285
Query: 238 TGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
V+SAC+ G ++ G ++ R K + N ++D+ + G +D A ++
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN----NSLIDMFSKCGDIDAAKRIFD 341
Query: 295 SMGVKPDSTIWRTLLGACRIH 315
SM K D W +++ +H
Sbjct: 342 SMSYK-DLISWNSMVNGFALH 361
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F + D + WN ++ ++ + R AL + + E S PD T +L+ C
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEM-LERSRNVPDRFTFPSLLKGC 89
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L + G+ +H + ++ S + + +L+ MY+ CG L A +F+ M ++ V W+
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK- 262
+MISG N +A+ + M+ G PD+ T ++SAC+ + GM + +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
D I + +V++ + G L A Q+ + K D W L+
Sbjct: 210 DMKICAVLG--SALVNMYAKCGDLKTARQVFDKLSDK-DVYAWSALI 253
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 172 NSLIAMYSKCGSLGM--AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRA 228
N LIA GSLG+ A+ VF E DV++W++M+ + R A++S+ M +R+
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 229 GVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGILPN-IHHYGCVVDLLGR 282
PD TF +L C+ G V G + + D I ++ Y DL
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 283 AGLLDQA---------------------------YQLITSMGVKPDSTIWRTLLGACRIH 315
L ++ Y+ + G PD TL+ AC
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 316 KHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
K + +G ++ H+ E+ + VL L+N+Y+ GD + +++ + +++K
Sbjct: 194 KDLGVGMKLHSHIREMDMKICA--VLGSALVNMYAKCGDLKTARQVFDKLSDK 244
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/461 (44%), Positives = 306/461 (66%), Gaps = 8/461 (1%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
++G L + ++ + D+ + T++ Y FE ++ K+F+ +P++D VAWN +I+
Sbjct: 27 VVGDLNLACKLFDEMPHKDTVTLDTMITAY--FESAY---KVFELMPEKDIVAWNSVING 81
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ N + +AL L+ + E G +PD T + +L ACA L L G + H Y+ + G
Sbjct: 82 FALNGKPNEALTLYKRMGSE--GVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLN 139
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGA 224
++ N+L+ +Y+KCG++ A ++F M E++VVSW+++I GLA+NG G++A+E F
Sbjct: 140 KNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKD 199
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M+R G+ P + TF GVL ACSHCG+V+EG + RM + + I+P I HYGC+VDLLGRAG
Sbjct: 200 MEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAG 259
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
LL +AY I M ++P++ IWRTLLGAC IH H+ LG L++L+ ++SGDYVLL N
Sbjct: 260 LLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSN 319
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
LY+S W V E+R M +G++ TPG S + L VHEFV+ D +HP+ IY+ML E
Sbjct: 320 LYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVE 379
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ +LK+AGYV + L ++ EEK +AL YHSEK+AIAF ++ T PGT IR+ KNLR+
Sbjct: 380 MAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKNLRV 439
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH K++S V+ R++++RD RFHHFR+G CSC DYW
Sbjct: 440 CADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 10/231 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++++ P E L+++M + + + F + C + +L+ G + H +++ G
Sbjct: 78 VINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVG 137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
+ L+DLY+ EA K+FDE+ +R+ V+W LI N ++AL F
Sbjct: 138 LNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHF 197
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMY 178
++ RE G P ++T + VL AC+H G + G E R ++ ++ ++ +
Sbjct: 198 KDMERE--GLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLL 255
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ G L A++ + MP + + V W ++ ++GH GA RA
Sbjct: 256 GRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGH-----LGLGAFARA 301
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/507 (41%), Positives = 316/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + + +E LF++M + + + + C + S+ G Q+H+ + G
Sbjct: 206 IISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHG 265
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +++ L+DLYS + AC LF + +D ++WN +I Y ++AL LF
Sbjct: 266 LGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQ 325
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L +L ACA LGA++FG IH YI + G + +L SLI MY
Sbjct: 326 EMLR--SGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMY 383
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF M + + + +AMI G AM+G A + F M++ G+ PDD TF
Sbjct: 384 AKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 443
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M++++ I P + HYGC++DLLG GL +A ++I +M +
Sbjct: 444 GLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTM 503
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V LGE + LI+++ + G YVLL N+Y++ G W +V +
Sbjct: 504 EPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANI 563
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 624 SEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCNDYW
Sbjct: 684 YKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 72/398 (18%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + N + F +K C K G QIH VL+ G
Sbjct: 74 MFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLG 133
Query: 61 YQLDSQLMTTLMDLY----------STFEKSF---------------------EACKLFD 89
Y+LD + T+L+ +Y F+ S A K+FD
Sbjct: 134 YELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFD 193
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y ++AL LF + + + KPD+ T + V+ ACA G++
Sbjct: 194 EIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK--TNVKPDESTMVTVVSACAQSGSI 251
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G ++H +I +HG GS + + N+LI +YSKCG + A +F+G+ KDV+SW+ MI G
Sbjct: 252 QLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGY 311
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+ G +D G +++D+ K G+
Sbjct: 312 THLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIK--GV 369
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSM------------------------------ 296
++D+ + G ++ A+Q+ SM
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSR 429
Query: 297 ----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
G++PD + LL AC + LG R+ + +
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 54/374 (14%)
Query: 44 CSLMGGLQI-HARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAW 99
C + L+I HA++++ G + ++ L++ L F+ A +F+ I + + + W
Sbjct: 12 CKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIW 71
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N + + + A+ L+ + G P+ T +L++CA L + G++IH ++
Sbjct: 72 NTMFRGHALSSDPVSAIKLY--VCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHV 129
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-------------------------- 193
+ GY + + SLI+MY K G A +VF G
Sbjct: 130 LKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQ 189
Query: 194 -----MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+P KDVVSW+A+ISG A G+ ++A++ F M + V PD+ T V+SAC+ G
Sbjct: 190 KMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSG 249
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
+ G + D G+ N+ ++DL + G ++ A L + K D W T+
Sbjct: 250 SIQLGRQVHSWID-DHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTM 307
Query: 309 LGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--------VGDWEKV---K 356
+G + H+ L + + E L++ E+ + V +L++ + G W V K
Sbjct: 308 IGG---YTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364
Query: 357 ELREFMNEKGLQTT 370
++ N L+T+
Sbjct: 365 RIKGVTNASSLRTS 378
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 310/505 (61%), Gaps = 19/505 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS S PEE L+ M +P N + F +K C +L QIHA +++ G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+++YS A LFD++ QRDT +AL LF
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------EALNLFH 191
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +G K D+V + LQACA LG L+ G+ IH YI +H L LI MY+K
Sbjct: 192 RM--QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAK 249
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A EVF+ M EK V W+AMISG A++G GR+A+E F MQ AGV P+ TFTG+
Sbjct: 250 CGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGI 309
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV E + + M + G P+I HYGC+VDLLGRAGLL +A +LI +M VKP
Sbjct: 310 LTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKP 369
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IW LL AC IH ++ LG+++ + LI++ G Y+ L +++++ G+W + +R
Sbjct: 370 NAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRR 429
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+G+ PGCS I + G HEF+ D SHP+I EI ML++I ++L+ GY ++
Sbjct: 430 QMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGD 489
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L +EK A+ +HSEKLA+ FG+++T PG TIR+ KNLR+C DCH K++S VY
Sbjct: 490 LLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYA 549
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RDR RFH F++G C+C DYW
Sbjct: 550 REILMRDRTRFHLFKDGNCTCGDYW 574
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 28/280 (10%)
Query: 41 MKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTV 97
++ CS M L QIH ++L+ G LD + L+ ++ A +FD I + +T
Sbjct: 25 LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTF 84
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
WN +I Y ++ +AL L+ ++ + T +L+AC+ + ALE ++IH
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHMLYH--SVPHNAYTFPFLLKACSSMSALEETQQIHA 142
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+I + G+GS++ NSL+ +YSK G + A +F + ++D +
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------E 185
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCV 276
A+ F MQ AG+ D+ L AC+ G++D+G + K + I P + GCV
Sbjct: 186 ALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL---GCV 242
Query: 277 -VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+D+ + G L++A ++ M K S +W ++ IH
Sbjct: 243 LIDMYAKCGDLEEAIEVFRKMEEKGVS-VWTAMISGYAIH 281
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 43/216 (19%)
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
GSL A VF + + W+ MI G + + +A+ + M V + TF +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG-------LLDQAYQLIT 294
ACS ++E + K G I+ ++++ ++G L DQ Q T
Sbjct: 126 KACSSMSALEETQQIHAHIIK-MGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 295 ----------SMGVKPDSTIWRTLLGACR----------IHKHVTLGERVIEHLIELKAQ 334
+ G+K D+ + L AC IH ++ +H IE+
Sbjct: 185 EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIK------KHEIEI--- 235
Query: 335 ESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGL 367
D +L L+++Y+ GD E+ E+ M EKG+
Sbjct: 236 ---DPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 268
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/508 (42%), Positives = 310/508 (61%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL-RD 59
M+ Y + EE LF++M + + + + C + S+ G +IH V
Sbjct: 186 MITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHH 245
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ +++ + LYS A LF+ + +D V+WN LI Y ++AL LF
Sbjct: 246 GFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 305
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAM 177
+ R SG P+DVT L VL ACAHLGA++ G IH YI + G + L SLI M
Sbjct: 306 QEMLR--SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDM 363
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG + A +VF M K + SW+AMI G AM+G A + F M++ G+ PDD T
Sbjct: 364 YAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITL 423
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+LSACSH GL+D G +++D+ I P + HYGC++DLLG AGL +A ++I M
Sbjct: 424 VGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMP 483
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++PD IW +LL AC++H ++ L E + L+E++ + SG YVLL N+Y++ G WE V
Sbjct: 484 MEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVAR 543
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+RE +N KG++ PGCS+I + VVHEF++ D HP+ EIY+ML+E++ L+ AG+V +
Sbjct: 544 IREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPD 603
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L + E K AL +HSEKLAIAFG+++T PGT + V KNLR+C +CH K++S
Sbjct: 604 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISK 663
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE++ RDR RFHHFR+G CSC DYW
Sbjct: 664 IYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 177/350 (50%), Gaps = 40/350 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R + SS ++ +M N + F +K C K + G QIHA+V++ G
Sbjct: 54 MLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLG 113
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSFE---------------------ACKLFD 89
+LD T+L+ +Y+ F+ S + A K+FD
Sbjct: 114 CELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFD 173
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
I +RD V+WN +I+ Y+ N +AL LF + R + +PD+ T + VL ACA G++
Sbjct: 174 XITERDVVSWNAMITGYVENCGYEEALELFKEMMR--TNVRPDEGTLVSVLSACAQSGSI 231
Query: 150 EFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
E G +IH + + HG+GS + + N+ I +YSKCG + +A +F+G+ KDVVSW+ +I G
Sbjct: 232 ELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGG 291
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFG 265
++A+ F M R+G P+D T VL AC+H G +D G +++D+ K G
Sbjct: 292 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK--G 349
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ ++D+ + G ++ A+Q+ SM K S+ W ++ +H
Sbjct: 350 VTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSS-WNAMIFGFAMH 398
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A VF+ E +++ W+ M+ GLA + +E + M G P+ TF +L +
Sbjct: 33 LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKS 92
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
C+ +EG ++ K G + + + ++ + R G L+ A ++
Sbjct: 93 CAKSKTFEEGRQIHAQVMK-LGCELDRYAHTSLISMYARNGRLEDARKV 140
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/541 (40%), Positives = 313/541 (57%), Gaps = 50/541 (9%)
Query: 13 EGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E LF M R+ N F +K C + L G QIH +++ G+ D +++ L
Sbjct: 104 EALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNL 163
Query: 72 M----------DLYSTFEKSF-------------------------------------EA 84
+ D YS F K+ A
Sbjct: 164 VRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSA 223
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
LFDE+PQR V+WNV+IS Y +N +A+ LF + + S P+ VT + VL A A
Sbjct: 224 KNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEM--QSSNIDPNYVTLVSVLPAIA 281
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
+GALE G+ IH Y ++ L ++L+ MYSKCGS+ A +VF+ +P+++ ++WSA
Sbjct: 282 RIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSA 341
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
+I AM+G DAI F M +AGV P+D + G+LSACSH GLV+EG F M K
Sbjct: 342 IIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVV 401
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
G+ P I HYGC+VDLLGRAG L++A +LI +M ++PD IW+ LLGAC++HK++ +GERV
Sbjct: 402 GLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERV 461
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
E L+EL +SG YV L NLY+S+G+WE V +R M ++ PGCS I + G++HE
Sbjct: 462 AETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHE 521
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F+V+D SH + EI ML E++ +L+ GY N +E+ AL YHSEK+A+A
Sbjct: 522 FLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVA 581
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+++T P +++ KNLRIC DCH K++S +Y R++I+RDR RFH F G CSC DY
Sbjct: 582 FGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDY 641
Query: 505 W 505
W
Sbjct: 642 W 642
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF++M+ I N + + +L G IH ++
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D L + L+D+YS EA ++F+ +P+R+ + W+ +I + + R DA+ F
Sbjct: 301 IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ + +G P+DV + +L AC+H G +E G ++ + G ++ ++ +
Sbjct: 361 LMGK--AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLG 418
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMN 212
+ G L A E+ + MP E D V W A++ M+
Sbjct: 419 RAGHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/455 (45%), Positives = 299/455 (65%), Gaps = 5/455 (1%)
Query: 54 ARVLRDGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
AR L D D ++ T ++ Y+ +A LFD +P +D V WN +I Y ++ R
Sbjct: 440 ARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGR 499
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNL 170
+AL LF + SG +PD+VT +LVL A A LG +E G+ +H Y+ + + +
Sbjct: 500 PNEALRLFRRM--LGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRV 557
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+LI MY KCGSLG A +VF G+ +KD+V W+AMI+G AM+G R A+E F + G+
Sbjct: 558 GTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGL 617
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
+P D TF G+L+ACSH G+V+EG F M +++GI P I HYGC+VDLLGRAGL+ +A+
Sbjct: 618 WPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAF 677
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
L+ SM + PD+ +W +LL ACR+HK+++LG+++ ++L+ SG Y+LL N+Y++VG
Sbjct: 678 CLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVG 737
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
+W +V +R M G+Q PGCS+I + V+EFV D+SHPR +EIY MLD++N +K
Sbjct: 738 NWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVK 797
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
G+V + LH+L K AL+ HSEKLA+AFG+++T PG TI++ KNLR C DCH
Sbjct: 798 EHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHA 857
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + R+++ RDR RFHHF +G CSC DYW
Sbjct: 858 VLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/463 (43%), Positives = 294/463 (63%), Gaps = 3/463 (0%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
+G L +LR +D+ TL+ Y+ + +A LFDE+P R+ V+W+ ++
Sbjct: 122 AGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMV 181
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ Y++ R+AL +F + E+ +PDD + VL ACA GALE G+ +H Y+ HG
Sbjct: 182 NGYVQAGDGREALRIFARMQAED--VRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHG 239
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ +L+ MYSKCG + +A +VF+ M K+V++W+ MI GLAM+G G +A+ F
Sbjct: 240 IKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFA 299
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+ +G+ PDD F GVL AC+H GLVD+G D M + +GI P I HYGC+VDLL R
Sbjct: 300 QMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARN 359
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
G L +A ++I M ++PD+ IW L+ CR HK+V E V +H I L+ +SG YVLL
Sbjct: 360 GFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLS 419
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y++ G +E+R M EKG+ TPGCST+ + GV+H+F+V D+SHPRI +I
Sbjct: 420 NIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWY 479
Query: 404 EINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNL 462
EI+ ++++ GY+ ++ L ++ EEK ALS HSEKLAIAF +++ IR+ KNL
Sbjct: 480 EIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNL 539
Query: 463 RICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
R+C DCH+ K++S VY RE+++RDR RFH F+EG CSC DYW
Sbjct: 540 RVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + E +F +M+ + + + + C + +L G +H + G
Sbjct: 180 MVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHG 239
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ T L+D+YS + A +F+ + ++ +AW +I + R +A+ LF
Sbjct: 240 IKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFA 299
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E SG +PDD+ + VL AC H G ++ G E + ++G K+ ++ + +
Sbjct: 300 QM--ESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 357
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A E+ + MP E D + W A+++G
Sbjct: 358 RNGFLYEAKEMIQKMPMEPDALIWGALMAG 387
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 313/507 (61%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + +E LFE+M + + + + C S+ G Q+H+ V G
Sbjct: 167 MISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHG 226
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLYS + AC LF + +D ++WN LI Y ++AL LF
Sbjct: 227 FDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 286
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L VL ACAHLGA++ G IH YI + G + +L SLI MY
Sbjct: 287 EMLR--SGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 344
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF M K + SW+AMI G AM+G + + F M++ G+ PDD TF
Sbjct: 345 AKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFV 404
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M++D+ + P + HYGC++DLLG +GL +A ++I +M +
Sbjct: 405 GLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 464
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V L E ++LI+++ + Y+LL N+Y+S G WE V +
Sbjct: 465 EPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARI 524
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N K ++ PGCS+I + VV EFVV D HP+ EIY ML+E+ L+ AG+V +
Sbjct: 525 RALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDT 584
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K+LS +
Sbjct: 585 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKI 644
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE++ RDR RFHHFR+G CSCNDYW
Sbjct: 645 YKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 180/349 (51%), Gaps = 39/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R +++SS P L+ M + N + F +K C K + G QIH +VL+ G
Sbjct: 35 MIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLG 94
Query: 61 YQLDSQLMTTLM----------DLYSTFEKSF---------------------EACKLFD 89
+ LD + T+L+ D Y F++S A KLFD
Sbjct: 95 FDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFD 154
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y ++AL LF+ + + +PD+ T + VL ACAH G++
Sbjct: 155 EIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK--MNVRPDESTYVTVLSACAHSGSI 212
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H ++ +HG+ S + + N+LI +YSKCG + A +F+G+ KDV+SW+ +I G
Sbjct: 213 ELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGY 272
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T VL AC+H G +D G +++D+ K G+
Sbjct: 273 THMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK--GV 330
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G ++ A+Q+ SM K S+ W ++ +H
Sbjct: 331 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS-WNAMIFGFAMH 378
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 50/330 (15%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+ I + + + WN +I + + +L L+ + G P+ T +L++C
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLY--VCMVSLGLLPNSYTFPFLLKSC 74
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK----------- 192
A G++IH + + G+ + + SLI+MY + L A++VF
Sbjct: 75 AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134
Query: 193 --------------------GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+P KDVVSW+AMISG A G ++A+E F M + V P
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRP 194
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D+ T+ VLSAC+H G ++ G + D G N+ ++DL + G ++ A L
Sbjct: 195 DESTYVTVLSACAHSGSIELGRQ-VHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--- 348
+ K D W TL+G + H+ L + + E L++ E+ + V +L++ +
Sbjct: 254 FQGLSYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309
Query: 349 -----VGDWEKV---KELREFMNEKGLQTT 370
+G W V K L+ N L+T+
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/200 (17%), Positives = 85/200 (42%), Gaps = 5/200 (2%)
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A VF+ + E + + W+ MI G A++ ++ + M G+ P+ TF +L +
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+ EG ++ K G +++ + ++ + + L+ AY++ + D
Sbjct: 74 CAKSKTFTEGQQIHGQVLK-LGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHR-DVV 131
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ L+ + +++ + E+ ++ + +++ Y+ G +++ EL E M
Sbjct: 132 SYTALITGYASRGDIRSAQKLFD---EIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188
Query: 364 EKGLQTTPGCSTIGLKGVVH 383
+ ++ L H
Sbjct: 189 KMNVRPDESTYVTVLSACAH 208
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 319/540 (59%), Gaps = 38/540 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP----FACSFAIKCCMKFCSLMGGLQIHARV 56
+++A+S ++ F Q +P P + + +K C ++ G ++H V
Sbjct: 96 LLKAFSQHNAWHTTISYFNN--QLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFV 153
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS--C--------- 105
+ G + + + +L+DLY + A KLFDE+ RD V+WN LIS C
Sbjct: 154 TKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKAR 213
Query: 106 --------------------YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
Y RN++ DA+ LF + + E G P+DVT + VL ACAH
Sbjct: 214 MVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQM-QHEGGLAPNDVTLVSVLSACAH 272
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G+ IHR+I + + L N+L MY+KCG + A VF M E+DV+SWS +
Sbjct: 273 LGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSII 332
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I GLAM G+ +A F M G+ P+D +F G+L+AC+H GLVD+G+ + D M + +G
Sbjct: 333 IMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYG 392
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P I HYGCVVDLL RAG LDQA LI SM ++P+ +W LLG CRI+K GERV+
Sbjct: 393 ITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVV 452
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
++EL + SG V L N+Y+S+G + R M + TPGCS I + V+EF
Sbjct: 453 WRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEF 512
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+ D SHP+ IY M+ E+ ++K+AGY + +HN+ EEK +ALS HSEKLA+AF
Sbjct: 513 FMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAF 572
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G++ T GTTIR+ KNLR+C DCH+ K++S + RE+++RDR RFHHF++G+CSCNDYW
Sbjct: 573 GLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 304/490 (62%), Gaps = 4/490 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+F +M ++ + + + +K C + G Q H ++ G + TL+++Y+
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A +FD + V++N +I+ +R+ +AL LF + + G KP VT
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREM--QAKGLKPTSVTL 242
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ VL ACA LGALE G IH YI + S + + +LI MY+KCGSL A VF+ M
Sbjct: 243 ISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMES 302
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+D +WS M+ A +G+GR+AI F M++ G+ PDD TF GVL ACSH G+V EG+ +
Sbjct: 303 RDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQY 362
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
D M +++GI+ I HYGCV DLL R+G L++AY+ I + +KP + +WRTLL AC H
Sbjct: 363 FDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHG 421
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
V +G+RV E ++EL GDYV+ NL ++ G WE++ +R+ M+EKG+ PGCS+I
Sbjct: 422 DVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSI 481
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALS 435
+ +VHEF D SHP E +M+DE+ +QLK+ GYV + H +G EEK +L
Sbjct: 482 EIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLR 541
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
YHSEKLAI+FG+L T PGTT+R+ KNLR+C DCH+ AK++S V+NR +I+RD RFHHF
Sbjct: 542 YHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFE 601
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 602 DGVCSCGDYW 611
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/504 (40%), Positives = 306/504 (60%), Gaps = 37/504 (7%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
++A + SP + LF ++RQ + + F CS ++ C+ L G +H V + G+
Sbjct: 133 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 192
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ +W +I+ Y++ + ++A+ LF
Sbjct: 193 R-----------------------------------SWTSMIAGYVQCGKAKEAIHLFAK 217
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ EE+G K ++VT + VL ACA LGAL+ G +IH Y + HG+ + + N+LI MY KC
Sbjct: 218 M--EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKC 275
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF+ M E+ VVSWSAMI GLAM+G +A+ F M + G+ P+ TF G+L
Sbjct: 276 GCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLL 335
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
ACSH GL+ EG F M++D+GI+P I HYGC+VDLL RAGLL +A++ I +M +KP+
Sbjct: 336 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 395
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+W LLGACR+HK+V + E I+HL+EL G YV+L N+Y+ G WE +R+F
Sbjct: 396 GVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKF 455
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M ++ ++ TPG S+I + GVVHEFV + SHP +I+Q +E+ +++++ GYV +
Sbjct: 456 MKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVV 515
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNR 481
L ++ EK +S HSEKLA+ FG++ TP T IR+ KNLRIC DCH+ K++S + NR
Sbjct: 516 LLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNR 575
Query: 482 EVIIRDRLRFHHFREGRCSCNDYW 505
E+++RDR RFH F + CSC DYW
Sbjct: 576 EIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E +LF KM + + N + C +L G++IH R G
Sbjct: 198 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 257
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++ TL+D+Y EACK+F+E+ +R V+W+ +I + R +AL LF
Sbjct: 258 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 317
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+++ + G +P+ VT + +L AC+H+G + G + ++ ++G ++ ++ + S
Sbjct: 318 DMS--QVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLS 375
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A E MP K + V W A++
Sbjct: 376 RAGLLHEAHEFILNMPMKPNGVVWGALLGA 405
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/495 (42%), Positives = 304/495 (61%), Gaps = 4/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE +F +M ++ + + + +K C + G Q H ++ G ++ TL
Sbjct: 124 EEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTL 183
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+++Y+ + A +F + V++N +I+ +R+ R +AL LF + + G K
Sbjct: 184 INMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREM--QAKGLKL 241
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
VT + VL ACA LGALE G IH Y+ + S + + +LI MY KCGSL A VF
Sbjct: 242 TSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVF 301
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+GM +D +WS MI A + +GR+AI F M++ G+ PDD TF GVL ACSH GLV
Sbjct: 302 QGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVS 361
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG+ + D M ++FG++P I HYGCV DLL R+G LD+AY+ I + +KP + +WRTLL A
Sbjct: 362 EGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSA 420
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C LG++V E ++EL GDYV+ NL ++ G WE++ +R+ MNEKG+ P
Sbjct: 421 CGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVP 480
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEK 430
GCS+I + VHEF D HP+ + +M+D + +QLK+AGYV + H +G EEK
Sbjct: 481 GCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSHVFHVEMGEEEK 540
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+L YHSEKLAI+FG+L T PGTT+RV KNLR+C DCH+ AK++S V+NR +I+RD R
Sbjct: 541 AVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNR 600
Query: 491 FHHFREGRCSCNDYW 505
FHHF +G CSC DYW
Sbjct: 601 FHHFEDGVCSCGDYW 615
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQ----IHARV 56
M+ A SS P E LF +M+ K + S + + C+L+G L+ IH V
Sbjct: 214 MITAAVRSSRPGEALVLFREMQAKGLKLT----SVTLISVLSACALLGALELGRWIHEYV 269
Query: 57 LRDGYQLDS--QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
+ QLDS ++ T L+D+Y +A +F + RD AW+V+I Y + R+
Sbjct: 270 RK--VQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGRE 327
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ LF+ + ++ G KPDDVT L VL AC+H G + G + + E G + +
Sbjct: 328 AISLFEEMKKQ--GIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCV 385
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDV-VSWSAMISGLAMNG 213
+ ++ G L A+E +P K + W ++S G
Sbjct: 386 ADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRG 425
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 304/490 (62%), Gaps = 4/490 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+F +M ++ + + + +K C + G Q H ++ G + TL+++Y+
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A +FD + V++N +I+ +R+ +AL LF + + G KP VT
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREM--QAKGLKPTSVTL 242
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ VL ACA LGALE G IH YI + S + + +LI MY+KCGSL A VF+ M
Sbjct: 243 ISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMES 302
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+D +WS M+ A +G+GR+AI F M++ G+ PDD TF GVL ACSH G+V EG+ +
Sbjct: 303 RDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQY 362
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
D M +++GI+ I HYGCV DLL R+G L++AY+ I + +KP + +WRTLL AC H
Sbjct: 363 FDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHG 421
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
V +G+RV E ++EL GDYV+ NL ++ G WE++ +R+ M+EKG+ PGCS+I
Sbjct: 422 DVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSI 481
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALS 435
+ +VHEF D SHP E +M+DE+ +QLK+ GYV + H +G EEK +L
Sbjct: 482 EIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLR 541
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
YHSEKLAI+FG+L T PGTT+R+ KNLR+C DCH+ AK++S V+NR +I+RD RFHHF
Sbjct: 542 YHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFE 601
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 602 DGVCSCGDYW 611
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/500 (43%), Positives = 312/500 (62%), Gaps = 5/500 (1%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++A + +S F NP F + +K C ++ G +IHA V +
Sbjct: 62 LKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQ 121
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDE--IPQRDTVAWNVLISCYIRNQRTRDALC 117
G++ + + +L+D+Y A LFDE + R+ V WN +I+ Y +N++ DA+
Sbjct: 122 GFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIE 181
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+F + ++ G P+DVT + VL ACAHLGAL+ G+ I +IS + L N+L M
Sbjct: 182 VF-RMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADM 240
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG + A VF M E+DV+SWS +I GLAM GH +A F M G P+D F
Sbjct: 241 YAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVF 300
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+L+AC+H GLV +G+ + M K++G+ P + HYGCVVDLL RAG LD+A +I+SM
Sbjct: 301 MGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMP 360
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KP+ IW LLG CRI++ G+RV++H++EL + SG YV L N+YSS+G + +
Sbjct: 361 MKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAK 420
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
R M E G+ TPGCS I + VHEF + D+SHP N+IY M+ E+ ++K+AGY +
Sbjct: 421 CRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPK 480
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+H++ EEK +ALS HSEKLAIAFG+++T GTTIRV KNLRIC DCH+ AK++SG
Sbjct: 481 TDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISG 540
Query: 478 VYNREVIIRDRLRFHHFREG 497
+ RE+I+RDR RFHHF++G
Sbjct: 541 IVKREIIVRDRSRFHHFKDG 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 11/241 (4%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +F + + A N + +N A+ F++ + PD+ T VL+A
Sbjct: 42 QAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKA 101
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM--PEKDVV 200
CA L + G+KIH +++ G+ S + + NSLI MY K G L +A +F M +++VV
Sbjct: 102 CAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVV 161
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMM---F 256
W+AMI+G A N DAIE F MQ+ GV P+D T VL AC+H G +D G F
Sbjct: 162 CWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGF 221
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ R G+ + D+ + G + +A ++ M + D W ++ ++
Sbjct: 222 ISRREMALGLFLG----NALADMYAKCGCITEARRVFNKMEER-DVISWSIIICGLAMYG 276
Query: 317 H 317
H
Sbjct: 277 H 277
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/528 (41%), Positives = 306/528 (57%), Gaps = 30/528 (5%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S E F MR+ + N AIK C L G Q H + L G++ D +
Sbjct: 54 SGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFV 113
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE-- 125
+ L+D+YS + +A LFDEI R+ V+W +I+ Y++N AL +FD +
Sbjct: 114 SSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDV 173
Query: 126 -----------ESGCKPDD-----------------VTCLLVLQACAHLGALEFGEKIHR 157
++G + VT VL ACAH G+ G+ IH
Sbjct: 174 ISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHD 233
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+ + G S + + S+I MY KCG + MA + F M EK+V SWSAM++G M+GH ++
Sbjct: 234 QVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKE 293
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+E F M AGV P+ TF VL+ACSH GL++EG + MS +F + P + HYGC+V
Sbjct: 294 ALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMV 353
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
DLLGRAG L +A+ LI M ++PD +W LLGACR+HK+V LGE L EL + G
Sbjct: 354 DLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCG 413
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
YVLL N+Y+ G WE V+ +R M GL PG S + +KG VH F+V D HP+ +
Sbjct: 414 YYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEK 473
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIR 457
IY+ L++++ +L+ GYV ++TS LH++G EEK L HSEKLA+AFG++ T PGTTI
Sbjct: 474 IYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIH 533
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ KNLR+C DCH K +S + +RE+++RD RFHHFR+G CSC DYW
Sbjct: 534 IIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YS +L F K + + +V SW+++I+ LA +G +A+ +F +M++ + P+ TF
Sbjct: 22 YSNNPNLTTLFN--KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTF 79
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ +CS + G + + FG P++ +VD+ + G L A L
Sbjct: 80 PCAIKSCSALLDLHSGRQ-AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTL 133
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/458 (44%), Positives = 295/458 (64%), Gaps = 11/458 (2%)
Query: 57 LRDGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
L DG + D ++ T ++ Y+ + +A LFD +P++D V WN ++ Y ++ R +
Sbjct: 178 LFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSE 237
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL---- 170
AL LF + R SG +PD+V+ +L L A A LG E G +H +++ G +++ L
Sbjct: 238 ALRLFRQMLR--SGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARV 295
Query: 171 CNSLIAMYSKCGSLGMAFEVFK---GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+L+ MY KCGSL A VF+ G ++DVV+W+AMI+G AM+G R+A+E+FG ++
Sbjct: 296 GTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRA 355
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
G++P D TF GVL+ACSH GLVDEG M +++GI+P + HYGC+VDLLGRAG ++
Sbjct: 356 QGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVE 415
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+A+ L+ SM KPD+ +W +LLGACR+HK++ LG+RV ++L+ SG YVLL N+Y+
Sbjct: 416 EAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYA 475
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
+ G W +V +R M G+Q PGCS + + V EFV D SHPR EIY L+E+N
Sbjct: 476 AAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNS 535
Query: 408 QLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
+ G+V LH+L K AL+ HSEKLA+AFG+++TPP T I++ KNLR C D
Sbjct: 536 IARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACAD 595
Query: 468 CHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
CH K++S R+++ RDR RFHHF +G CSC DYW
Sbjct: 596 CHAVLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 117/321 (36%), Gaps = 43/321 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+IHA +R D + L Y+ + A L P V + I +
Sbjct: 42 EIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRG 101
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R AL L + G P T L AC G L G +H Y + + +
Sbjct: 102 LHRAALALLSEMLLSRHGLLPTAHTLSASLPAC---GCLAVGRALHGYAVKLALSGEPYV 158
Query: 171 CNSLIAM--------------------------------YSKCGSLGMAFEVFKGMPEKD 198
+L+ M Y+K G L A +F +P KD
Sbjct: 159 ATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKD 218
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM--- 255
+V W+AM+ G +G +A+ F M R+GV PD+ + LSA + G + G
Sbjct: 219 LVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHS 278
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACR 313
F+ + + N +VD+ + G L++A + +G D + W ++
Sbjct: 279 FVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYA 338
Query: 314 IHKHVTLGERVIEHLIELKAQ 334
+H +E +L+AQ
Sbjct: 339 MHGR---SREALEAFGQLRAQ 356
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/507 (40%), Positives = 316/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R Y+ + F L+ +MR + + F IK + G IH+ V+R
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + +L+ LY+ A K+FD++P++D VAWN +I+ + N + +AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+N + G KPD T + +L ACA +GAL G+++H Y+ + G ++ N L+ +Y+
Sbjct: 211 TEMNSK--GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFT 238
+CG + A +F M +K+ VSW+++I GLA+NG G++AIE F M+ G+ P + TF
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L ACSHCG+V EG + RM +++ I P I H+GC+VDLL RAG + +AY+ I SM +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P+ IWRTLLGAC +H L E +++L+ SGDYVLL N+Y+S W V+++
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G++ PG S + + VHEF++ D SHP+ + IY L E+ +L+ GYV +I
Sbjct: 449 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 508
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
++ ++ EEK NA+ YHSEK+AIAF +++TP + I V KNLR+C DCH K++S V
Sbjct: 509 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 568
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE+++RDR RFHHF+ G CSC DYW
Sbjct: 569 YNREIVVRDRSRFHHFKNGSCSCQDYW 595
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 312/541 (57%), Gaps = 50/541 (9%)
Query: 13 EGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E LF M R+ N F +K C + L G QIH +++ G+ D +++ L
Sbjct: 104 EALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNL 163
Query: 72 M----------DLYSTFEKSF-------------------------------------EA 84
+ D YS F K+ A
Sbjct: 164 VRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSA 223
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
LFDE+P R V+WNV+IS Y +N +A+ LF + + S P+ VT + VL A A
Sbjct: 224 KNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEM--QSSNIDPNYVTLVSVLPAIA 281
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
+GALE G+ IH Y ++ L ++L+ MYSKCGS+ A +VF+ +P+++ ++WSA
Sbjct: 282 RIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSA 341
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
+I AM+G DAI F M +AGV P+D + G+LSACSH GLV+EG F M K
Sbjct: 342 IIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVV 401
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
G+ P I HYGC+VDLLGRAG L++A +LI +M ++PD IW+ LLGAC++HK++ +GERV
Sbjct: 402 GLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERV 461
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
E L+EL +SG YV L NLY+S+G+WE V +R M ++ PGCS I + G++HE
Sbjct: 462 AETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHE 521
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F+V+D SH + EI ML E++ +L+ GY N +E+ AL YHSEK+A+A
Sbjct: 522 FLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVA 581
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+++T P +++ KNLRIC DCH K++S +Y R++I+RDR RFH F G CSC DY
Sbjct: 582 FGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDY 641
Query: 505 W 505
W
Sbjct: 642 W 642
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF++M+ I N + + +L G IH ++
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D L + L+D+YS +A ++F+ +P+R+ + W+ +I + + R DA+ F
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ + +G P+DV + +L AC+H G +E G ++ + G ++ ++ +
Sbjct: 361 LMGK--AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLG 418
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMN 212
+ G L A E+ + MP E D V W A++ M+
Sbjct: 419 RAGHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 318/537 (59%), Gaps = 34/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R +S + P + F + +M + RI + F IK + ++ G Q H++++R G
Sbjct: 90 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFG 149
Query: 61 YQLDSQLMTTLMDLYST---------------FEKSF----------------EACKLFD 89
+Q D + +L+ +Y+ F +A ++FD
Sbjct: 150 FQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFD 209
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
E+P R+ W+++I+ Y +N A+ LF+ + RE G ++ + V+ +CAHLGAL
Sbjct: 210 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKRE--GVVANETVMVSVISSCAHLGAL 267
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
EFGE+ H Y+ + + L +L+ MY +CG + A VF+ +P+KD +SWS++I GL
Sbjct: 268 EFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGL 327
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++GH AI F M R G P D T T VLSACSH GLVD+G+ + M +D+GI P
Sbjct: 328 AVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPR 387
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VD+LGRAG L +A I M VKP++ I LLGAC+I+K+ + ERV LI
Sbjct: 388 LEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLI 447
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV-D 388
E+K + SG YVLL N+Y+ G WEK++ LR+ M EK ++ PG S I + G +++F + D
Sbjct: 448 EVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGD 507
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
D HP + +I ++ +EI ++++ GY ++ EEK A+ HSEKLAIA+G++
Sbjct: 508 DQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMM 567
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T GTTIR+ KNLR+C DCH K++S VY RE I+RDR RFHHFR G CSC DYW
Sbjct: 568 KTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 41 MKFCSLMGGLQI-HARVLRDGYQLDSQLMTTLMDLY-----STFEKSFE----ACKLFDE 90
++ CS L+I H +LR D + + L+ L STF K A +F +
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFSQ 78
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
I + +NVLI C+ A + + + S PD++T +++A + +
Sbjct: 79 IQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLK--SRIWPDNITFPFLIKASTEMECVV 136
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG-- 208
GE+ H I G+ + + + NSL+ MY+ CG + A +F MP +DVVSW++M++G
Sbjct: 137 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYC 196
Query: 209 ------------------------LAMNGHGRD-----AIESFGAMQRAGVFPDDQTFTG 239
+ +NG+ ++ AI+ F M+R GV ++
Sbjct: 197 KCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVS 256
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V+S+C+H G ++ G + + K + N+ +VD+ R G +++A ++ + K
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSH-MTVNLILGTALVDMYWRCGEIEKAIRVFEELPDK 315
Query: 300 PDSTIWRTLLGACRIHKH 317
DS W +++ +H H
Sbjct: 316 -DSLSWSSIIKGLAVHGH 332
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/538 (40%), Positives = 315/538 (58%), Gaps = 35/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A+++ P++ LF++M K + N + C K L G I + + +G
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNG 304
Query: 61 YQ----LDSQLM---------------------------TTLMDLYSTFEKSFEACKLFD 89
+ L++ ++ TT++D ++ EA +FD
Sbjct: 305 FTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFD 364
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P + T AWN LIS Y +N + R AL LF + + KPD+VT + L A A LGA+
Sbjct: 365 AMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDA-KPDEVTLICALCASAQLGAI 423
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+FG IH YI +H +L SL+ MY+KCG+L A EVF + KDV WSAMI L
Sbjct: 424 DFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGAL 483
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM G G+ A++ F +M A + P+ TFT +L AC+H GLV+EG ++M +GI+P
Sbjct: 484 AMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQ 543
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HY CVVD+ GRAGLL++A I M + P + +W LLGAC H +V L E ++L+
Sbjct: 544 IQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLL 603
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ G +VLL N+Y+ GDWEKV LR+ M + ++ P CS+I + G+VHEF+V D
Sbjct: 604 ELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGD 663
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK--GNALSYHSEKLAIAFGV 447
SHP +IY LDEI+++ K GY ++ S L L E+ +L+ HSEKLAIAFG+
Sbjct: 664 NSHPFSQKIYSKLDEISEKFKPIGYKPDM-SNLLQLSEEDNLMEQSLNVHSEKLAIAFGL 722
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++T IR+ KN+RIC DCH FAK++S +Y+R++++RDR RFHHFR G+CSC DYW
Sbjct: 723 ISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 157/349 (44%), Gaps = 39/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK--RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++R Y+ SS P + F +F M P N F F K + L G +H V++
Sbjct: 143 LIRGYASSSDPTQSFLIFLHMLHSCSEFP-NKFTFPFLFKAASRLKVLHLGSVLHGMVIK 201
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D ++ +L++ Y + A ++F +P +D V+WN +I+ + AL L
Sbjct: 202 ASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLL 261
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E KP+ +T + VL ACA LEFG I YI +G+ + L N+++ MY
Sbjct: 262 FQEM--EMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMY 319
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA---------------------------- 210
KCG + A ++F M EKD+VSW+ M+ G A
Sbjct: 320 VKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALIS 379
Query: 211 ---MNGHGRDAIESFGAMQRA-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
NG R A+ F MQ + PD+ T L A + G +D G ++ K I
Sbjct: 380 AYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDI 438
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
N H ++D+ + G L++A ++ ++ K D +W ++GA ++
Sbjct: 439 NLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK-DVYVWSAMIGALAMY 486
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 124/281 (44%), Gaps = 10/281 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTVAWNVLISCYIR 108
QIHA +LR D + L+ Y+ S A +F++IPQ + WN LI Y
Sbjct: 90 QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + +F ++ S P+ T + +A + L L G +H + + S +
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEF-PNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ NSLI Y G+ +A VF MP KDVVSW+AMI+ A+ G A+ F M+
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
V P+ T VLSAC+ ++ G + + G ++ ++D+ + G ++
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN-GFTEHLILNNAMLDMYVKCGCIND 327
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
A L M K D W T+L H LG H I
Sbjct: 328 AKDLFNKMSEK-DIVSWTTMLDG-----HAKLGNYDEAHCI 362
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/521 (42%), Positives = 314/521 (60%), Gaps = 37/521 (7%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY- 75
L E R +P++ S A+ C + G IH+ ++ G Q +S +M L+ +Y
Sbjct: 543 LIELHRSGSVPSDSSFTS-ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYA 601
Query: 76 ---------------------------STFEKSF---EACKLFDEIPQRDTVAWNVLISC 105
S +++ +A +F+++P+RD V+W +IS
Sbjct: 602 KCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISA 661
Query: 106 YIRNQRTRDALCLF-DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y++ AL LF D L R G KP+ +T +L AC +LGA++ GE+ H I + G+
Sbjct: 662 YVQAGHGEVALDLFLDMLAR---GIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGF 718
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ + + NSLI MY KCG F VF+ MPE D+++W+A++ G A NG G++AI+ F
Sbjct: 719 DTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQ 777
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M+ G+ PD +F GVL ACSH GLVDEG + M++ +GI+P ++HY C+VDLLGRAG
Sbjct: 778 MEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAG 837
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
L +A LI +M VKPDS IW LLGACRIH++V LG+RV E L ++ +S YVLL N
Sbjct: 838 YLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSN 897
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
L++S G W+KV E+R+ M ++GL PG S I +K +H FV D +H +I EIY L E
Sbjct: 898 LFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKE 957
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ GY+ + LH++ E+K N L YHSEKLA+ FG+L+TP G+ I++ KNLRI
Sbjct: 958 YYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRI 1017
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH F K +S V R++IIRD RFHHFR+G CSC DYW
Sbjct: 1018 CGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 148/311 (47%), Gaps = 16/311 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y S E + +F KM R + F + + L+G L+ A ++
Sbjct: 332 MISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIA--IK 389
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY+ D + + +++ Y+ A F+ +P+R+ +W +I+ + + R DA+ L
Sbjct: 390 TGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQL 449
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
++ + + K +T A A +G ++ R I + + N++IA Y
Sbjct: 450 YERVPEQTVATKTAMMT------AYAQVGRIQKA----RLIFDEILNPNVVAWNAIIAGY 499
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
++ G L A ++F+ MP K+ SW+AMI+G N R+A+E + R+G P D +FT
Sbjct: 500 TQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFT 559
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
LSAC++ G V+ G + + ++ G N + ++ + + G ++ + ++ V
Sbjct: 560 SALSACANIGDVEIGRV-IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 299 KPDSTIWRTLL 309
K D+ W +L+
Sbjct: 619 K-DTVSWNSLI 628
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 19/275 (6%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LFD++P+R++V+W V+IS Y+ +A +F + R + +PD ++VL A
Sbjct: 313 EARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR--TVARPDQSIFVVVLSA 370
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
L LE + + GY + + ++++ Y++ GSL +A F+ MPE++ SW
Sbjct: 371 ITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSW 430
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI+ A G DAI+ + + V T T +++A + G + + + D +
Sbjct: 431 TTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDEI-- 484
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+ PN+ + ++ + G+L +A L M VK +S W ++ ++
Sbjct: 485 ---LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMIAGFVQNEE---SR 537
Query: 323 RVIEHLIELKAQES----GDYVLLLNLYSSVGDWE 353
+E LIEL S + L+ +++GD E
Sbjct: 538 EALELLIELHRSGSVPSDSSFTSALSACANIGDVE 572
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 30/341 (8%)
Query: 22 RQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+ K P T+ F C+ I+ + +G ++ RV + Q D ++++ YS K
Sbjct: 162 KNKETPQTHLFQCNTRIQELGR----LGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGK 217
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
EA LFD ++ W +L++ Y + R +A +F ES + + V+ ++
Sbjct: 218 VDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVF------ESMTERNVVSWNAMI 271
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
G L+ K+ + E S NS++ Y C + A E+F MPE++ V
Sbjct: 272 SGYVQNGDLKNARKLFDEMPEKNVAS----WNSVVTGYCHCYRMSEARELFDQMPERNSV 327
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD-EGMMFLDR 259
SW MISG +A + F M R PD F VLSA + GL D E + L
Sbjct: 328 SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GLDDLELIGSLRP 385
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC----RIH 315
++ G ++ +++ R G LD A +M + + + W T++ A R+
Sbjct: 386 IAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYS-WTTMIAAFAQCGRLD 444
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+ L ERV E + K ++ Y+ VG +K +
Sbjct: 445 DAIQLYERVPEQTVATKTA-------MMTAYAQVGRIQKAR 478
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 62/291 (21%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA ++F+E+ QRD V+WN +I+ Y +N + +A LFD
Sbjct: 189 EARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF-------------------- 228
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
G + L+ Y+K G + A EVF+ M E++VVSW
Sbjct: 229 ---------------------VGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSW 267
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMISG NG ++A + F M V ++ V++ HC + E D+M
Sbjct: 268 NAMISGYVQNGDLKNARKLFDEMPEKNV----ASWNSVVTGYCHCYRMSEARELFDQM-- 321
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLD--QAYQLITSM---GVKPDSTIWRTLLGACRIHKH 317
P + +V + G + D +A+ + M +PD +I+ +L A
Sbjct: 322 -----PERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDD 376
Query: 318 VTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
+ L + I +K GD V+ +LN Y+ G + E M E+
Sbjct: 377 LELIGSL--RPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER 425
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/490 (43%), Positives = 300/490 (61%), Gaps = 4/490 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+F +M ++ + + + +K C + G Q HA ++ G + TL+++Y+
Sbjct: 120 VFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYA 179
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ A F V++N +I+ +R+ R +AL LF + + G P VT
Sbjct: 180 ECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREM--QAKGLNPTPVTV 237
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ VL ACA LGAL+ G +H Y+ + G GS + + +L+ MY+KCGSL A VF+GM
Sbjct: 238 ISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMES 297
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+D +WS MI A +G+GR+AI F M++ G+ PDD TF G+L ACSH GLV EG+ +
Sbjct: 298 RDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRY 357
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
D M KD GI+P I HYGCV DLL R+G L++AY+ I + + P +WRTLL AC H
Sbjct: 358 FDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHG 416
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
V LG+RV E ++EL GDYV+ NL ++ G WE++ +R+ M++KG+ PGCS+I
Sbjct: 417 DVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSI 476
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALS 435
+ VHEF D HP+ E +M+DE+ QLK+ GY+ + + H +G EEK +L
Sbjct: 477 EIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLK 536
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
YHSEKLAIAFG+L T PG T+RV KNLR+C DCH+ AK +S V+NR +I+RD RFHHF
Sbjct: 537 YHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFE 596
Query: 496 EGRCSCNDYW 505
G CSC DYW
Sbjct: 597 RGICSCGDYW 606
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A SS P E LF +M+ K + P + C +L G +H V + G
Sbjct: 205 MIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLG 264
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ T L+D+Y+ +A +F + RD AW+V+I Y + R+A+ LF+
Sbjct: 265 LGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFE 324
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ G KPDD+T L +L AC+H G + G + + +HG + + + ++
Sbjct: 325 EMKKQ--GMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLAR 382
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHG 215
G L A++ +P + W ++S A GHG
Sbjct: 383 SGQLERAYKFIDELPINPTPILWRTLLS--ACGGHG 416
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/449 (45%), Positives = 299/449 (66%), Gaps = 2/449 (0%)
Query: 42 KFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNV 101
K + G ++H+ +R+G++ + TL+ +Y+ + A KLF+ + +R+ V WN
Sbjct: 7 KLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNS 66
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
+I+ Y N R +AL LF + G +PD T + +L ACA LGAL G + H Y+ +
Sbjct: 67 VINGYALNGRPNEALTLFREMGLR--GVEPDGFTMVSLLSACAELGALALGRRAHVYMVK 124
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
G ++ N+L+ +Y+KCGS+ A +VF M EK VVSW+++I GLA+NG G++A+E
Sbjct: 125 VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALEL 184
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
F ++R G+ P + TF GVL ACSHCG+VDEG + RM +++GI+P I HYGC+VDLLG
Sbjct: 185 FKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLG 244
Query: 282 RAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL 341
RAGL+ QA++ I +M ++P++ +WRTLLGAC IH H+ LGE L++L+ + SGDYVL
Sbjct: 245 RAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVL 304
Query: 342 LLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQM 401
L NLY+S W V ++R M +G++ TPG S + L+ +HEFV+ D SHP+ EIY
Sbjct: 305 LSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVK 364
Query: 402 LDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKN 461
L EI K LK+ GYV I++ L ++ EEK ALSYHSEK+AIAF ++ T G IRV KN
Sbjct: 365 LAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKN 424
Query: 462 LRICVDCHNFAKVLSGVYNREVIIRDRLR 490
LR+C DCH K++S V++RE+++RDR R
Sbjct: 425 LRVCADCHLAIKLISKVFDREIVVRDRSR 453
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 5/192 (2%)
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+A A L + GEK+H +G+ S + + N+L+ MY+ CG A ++F+ M E+++V
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
+W+++I+G A+NG +A+ F M GV PD T +LSAC+ G + G M
Sbjct: 63 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 122
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
K G+ N+H ++DL + G + QA+++ M K W +L+ ++
Sbjct: 123 VK-VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK-SVVSWTSLIVGLAVN---GF 177
Query: 321 GERVIEHLIELK 332
G+ +E EL+
Sbjct: 178 GKEALELFKELE 189
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+++ P E LF +M + + + F + C + +L G + H +++ G
Sbjct: 67 VINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG 126
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+DLY+ +A K+FDE+ ++ V+W LI N ++AL LF
Sbjct: 127 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFK 186
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
L R+ G P ++T + VL AC+H G ++ G + R E+G K+ ++ +
Sbjct: 187 ELERK--GLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLG 244
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G + A E + MP + + V W ++ ++GH
Sbjct: 245 RAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 280
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 314/508 (61%), Gaps = 6/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R ++ S SP + + + +M + + F SF +K C + +L ++H ++R
Sbjct: 80 IIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCEEVHGSIIRT 139
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
GY+ D + T L+ Y A +FD +P+RD VAWN +ISCY + ++AL ++
Sbjct: 140 GYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALRVY 199
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
D + E G D T + +L +C+H+GAL G K+HR SE G + + N+LI MY+
Sbjct: 200 DYMRNENVGV--DGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGNALIDMYA 257
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGSL A EVF GMP +D +W++MI G ++G G +AI F M AGV P+ F G
Sbjct: 258 KCGSLDGALEVFNGMP-RDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAGVRPNSIAFLG 316
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L CSH GLV+EG+ F +MS F + P I HYGC+VD+ GRAG L++A ++I +
Sbjct: 317 LLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEIIGDSPWQ 376
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +WR LL + +IHK+V +GE + +L +L A +GD VLL +Y+ D + V +R
Sbjct: 377 DDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAGANDEQGVARMR 436
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ + ++G++TTPG S I + VH FVVDD SHP IYQ L+E+ + +AGYV + +
Sbjct: 437 KLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKLEEVTHKATMAGYVEDKS 496
Query: 420 SELHNLGAEEK--GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ + E+ ++ +YHSEKLAIAFG+ TP GT++R+ KNLR+C DCH F K +S
Sbjct: 497 QFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCRDCHEFTKFVSR 556
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+NR++I+RDRLRFHHF+ G CSC DYW
Sbjct: 557 AFNRDIIVRDRLRFHHFKGGLCSCRDYW 584
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEVFKGM 194
L VLQ C +L L+ KI ++ +G + + NS++ S GSL A +F+ +
Sbjct: 13 LTVLQGCNNLTRLK---KIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHI 69
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSAC 244
+W+++I G A + AI + M V PD TF+ L AC
Sbjct: 70 LNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKAC 120
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/508 (42%), Positives = 314/508 (61%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ R YS S++P E F LF ++ + + + + +K C +L G Q+H ++ G
Sbjct: 102 IARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ E A +FD I + V +N +I+ Y R R +AL LF
Sbjct: 162 VDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF- 220
Query: 121 NLNREESG--CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
RE G KP+++T L VL +CA LG+L+ G+ IH Y +HG+ + + +LI M+
Sbjct: 221 ---REMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMF 277
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCGSL A +F+ M KD +WSAMI A +G +++ F M+ V PD+ TF
Sbjct: 278 AKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFL 337
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L+ACSH GLV+EG + M +FGI+P+I HYG +VDLLGRAG L+ AY+ I + +
Sbjct: 338 GLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPI 397
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P +WR LL AC H ++ L E+V E ++EL GDYV+L NLY+ WE V L
Sbjct: 398 SPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSL 457
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M ++ PGCS+I + VVHEF D ++++ LDE+ K+LK+AGYV +
Sbjct: 458 RKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDT 517
Query: 419 TSELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ +H ++G +EK L YHSEKLAIAFG+L TPPGTTIRV KNLR+C DCH+ AK++S
Sbjct: 518 SMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISL 577
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ R+V++RD RFHHF +G+CSC D+W
Sbjct: 578 IFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
S+ A +F M E D+V ++++ G + + + + F + + PD+ TF +L
Sbjct: 79 SSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLL 138
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
AC+ ++EG L +S G+ N++ ++++ +D A
Sbjct: 139 KACAVAKALEEGRQ-LHCLSMKLGVDDNVYVCPTLINMYTECEDVDAA 185
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/472 (43%), Positives = 303/472 (64%), Gaps = 5/472 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-- 94
I+ C + +L G +HA ++G+ + +L+ LY A K+FDE+P R
Sbjct: 811 IQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGR 870
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+ V+WN +++ + N R + L +F + + PD T + VL ACA GAL G +
Sbjct: 871 NLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFA--PDGFTIVSVLTACAEFGALALGRR 928
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+H Y+ + G ++ N+LI +Y+KCGS+ A +F+ M + VVSW+++I GLA NG
Sbjct: 929 VHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANG 988
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
G++A+E F M+R + P + T GVL ACSHCGLVD+G + DRM +D+GI P I H
Sbjct: 989 FGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHL 1048
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
GC+VDLLGRAG +++AY I +M ++P++ +WRTLLG+C +HK + LG+ E L+EL
Sbjct: 1049 GCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDP 1108
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
SGDYVLL NLY++VG W V LR+ M + ++ PG S + L+ V+EFV+ D SHP
Sbjct: 1109 GHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHP 1168
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
+IY+ML EI ++L+ GY+ ++ L ++ EEK AL+YHSE+LAIAF +L + PG
Sbjct: 1169 ESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPG 1228
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IR+ KNLR+C DCH ++S VY+RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 1229 IPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 1280
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D N ++ + R R AL L+R PD T ++QACA L AL GE
Sbjct: 771 DPFPLNTVLRIAAGSPRPRVAL----ELHRRRLAL-PDTHTYPPLIQACARLLALREGEC 825
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMN 212
+H +++G+ + + + NSL+ +Y CG A +VF MP +++VSW++M++ A N
Sbjct: 826 LHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAAN 885
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G + + F M PD T VL+AC+ G + G + K G++ N H
Sbjct: 886 GRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEK-VGLVENSHV 944
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++DL + G ++ A ++ MG+ W +L+
Sbjct: 945 SNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 981
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +++ + P E +F +M + F + C +F +L G ++H V + G
Sbjct: 878 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVG 937
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
+S + L+DLY+ +A ++F+E+ R V+W LI N ++AL LF
Sbjct: 938 LVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 997
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMY 178
+ RE+ P ++T + VL AC+H G ++ G + R ++G ++ ++ +
Sbjct: 998 SLMEREK--LVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLL 1055
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMN 212
+ G + A++ MP E + V W ++ AM+
Sbjct: 1056 GRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 1090
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/507 (41%), Positives = 316/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + S +E LF++M + + + + C + S+ G Q+H+ + G
Sbjct: 169 MISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG 228
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLYS + AC LF+ + +D V+WN LI Y ++AL LF
Sbjct: 229 FGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQ 288
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT + +L ACAHLGA++ G IH YI + + +L SLI MY
Sbjct: 289 EMLR--SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMY 346
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF M K + SW+AMI G AM+G + F M++ G+ PDD TF
Sbjct: 347 AKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFV 406
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G +D G M++D+ I P + HYGC++DLLG +GL +A ++I +M +
Sbjct: 407 GLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPM 466
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL ACR H ++ L E +L++++ + G YVLL N+Y++ G+W++V ++
Sbjct: 467 EPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKV 526
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N KG++ PGCS+I + VHEF+V D HPR EIY ML+E+ L+ AG+V +
Sbjct: 527 RALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDT 586
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 587 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKI 646
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR RFHHFR+G CSCND+W
Sbjct: 647 YKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 182/355 (51%), Gaps = 39/355 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y++SS P L+ M + N + F +K C K + G QIH VL+ G
Sbjct: 37 MLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLG 96
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSF---------------------EACKLFD 89
Y+ D + T+L+ +Y+ F++S A ++FD
Sbjct: 97 YEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFD 156
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y ++AL LF + + + +PD+ T + VL ACA ++
Sbjct: 157 EIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK--TNVRPDEGTMVTVLSACAQSRSV 214
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N+LI +YSKCG + A +F+G+ KDVVSW+ +I G
Sbjct: 215 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGY 274
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+H G +D G +++D+ KD
Sbjct: 275 THMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTN 334
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
P++ ++D+ + G ++ A+Q+ SM K S+ W ++ +H G
Sbjct: 335 APSLR--TSLIDMYAKCGDIEAAHQVFNSMLHKSLSS-WNAMIFGFAMHGRANAG 386
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 50/330 (15%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F I + + + WN ++ Y + AL L+ + G P+ T +L++C
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLY--VVMISLGLLPNSYTFPFLLKSC 76
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK----------------------- 180
A A E G++IH ++ + GY + + SLI+MY++
Sbjct: 77 AKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136
Query: 181 --------CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
G++ A E+F +P KDVVSW+AMISG A G ++A+E F M + V P
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRP 196
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D+ T VLSAC+ V+ G + D G N+ ++DL + G ++ A L
Sbjct: 197 DEGTMVTVLSACAQSRSVELGRQVHSWID-DHGFGSNLKIVNALIDLYSKCGQVETACGL 255
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--- 348
+ K D W TL+G + H+ L + + E L++ ES + V ++++ +
Sbjct: 256 FEGLSCK-DVVSWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311
Query: 349 -----VGDWEKV---KELREFMNEKGLQTT 370
+G W V K+L++ N L+T+
Sbjct: 312 LGAIDIGRWIHVYIDKKLKDVTNAPSLRTS 341
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 317/508 (62%), Gaps = 8/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R ++ S+ P L R+ P + ++ C + +L G +HA ++G
Sbjct: 96 VLRIFASSARPRVALALH---RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACKNG 152
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
+ +L+ LY A ++FDEIP +R+ V+WN +++ + N R + L +
Sbjct: 153 LVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTV 212
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E PD T + VL ACA +G L G ++H ++++ G + N+LI +Y
Sbjct: 213 FREMLEVEFA--PDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLY 270
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+KCG + A ++F M + VVSW+++I GLA+NG G DA++ F M+R + P + T
Sbjct: 271 AKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITM 330
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVL ACSHCGLVD+G + D+M ++GI P I H GC+VDLLGRAG +++A+ IT+M
Sbjct: 331 VGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMP 390
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++P++ +WRTLLGAC +HK + +GE L+EL SGDYVLL NLY+ VG W V
Sbjct: 391 LEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHV 450
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR+ M G++ PG S + L+ V+EFV+ D SHP ++IY+ML +I ++L+ GY+
Sbjct: 451 LRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPH 510
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
++ L ++ EEK +AL+YHSE+LAIAF +L + PGT IR+ KNLR+C DCH K++S
Sbjct: 511 TSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLISK 570
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
VY+RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 571 VYDREIIVRDRSRFHHFKGGACSCKDYW 598
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/513 (41%), Positives = 311/513 (60%), Gaps = 11/513 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-----RIP-TNPFACSFAIKCCMKFCSLMGGLQIHA 54
M+RAYS S+ P F LF M+ +P + F F +K C K G QIH
Sbjct: 66 MIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQIHG 125
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
V + G D + L+ LYS + A K+FD++P RD V+W +I ++ N R +
Sbjct: 126 LVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIE 185
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ LF ++ E+G +P++VT VL+ACA GAL GE+IH ++ E + S N+ +L
Sbjct: 186 AIRLFTHMI--ENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTAL 243
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I MY+KCG + A EVF EKDV W+A+I+GLA +G AIE F M+++ V D+
Sbjct: 244 IDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDE 303
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+ T VLSA + GLV EG++F R+ K I P I HYGCVVD+L RAG L A + I
Sbjct: 304 RAITAVLSAYRNAGLVSEGLLFFRRLKK-HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIR 362
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL--IELKAQESGDYVLLLNLYSSVGDW 352
M ++PD+ +WRTL+ C+I V ER++ L + + ++++G YVLL N+Y++ G W
Sbjct: 363 KMPIEPDAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTGSYVLLENVYAATGKW 422
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
E+ + RE M ++GL P CS I + GVVHEF D H +Y+ L+++ ++L+
Sbjct: 423 EEKAKTRELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATAVYEKLEDVEERLRGE 482
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GY ++ L + +EK + L +HSEKLA++FG++ + PG+ IR+ KNLR C DCH+F
Sbjct: 483 GYNPIVSEVLLEIDDDEKASQLLHHSEKLAVSFGLVKSSPGSVIRIVKNLRSCEDCHSFM 542
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S VY R++I+RDR+RFHHF G CSC D W
Sbjct: 543 KLISKVYQRDIIVRDRIRFHHFSGGNCSCGDRW 575
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 12/284 (4%)
Query: 41 MKFCSLMGGLQIHARVLRDG-----YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
M+ S+ +Q+HAR+L+ G + D + T L + + ++ A + + +
Sbjct: 1 MEITSMTQAMQLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNY-ARHILRTLHTPN 59
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGC----KPDDVTCLLVLQACAHLGALEF 151
+ +N +I Y + A LF + + +PD T VL+AC+ G F
Sbjct: 60 SFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARF 119
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G++IH + + G GS + N+LI +YS G +A++VF MP++DVVSW+++I G
Sbjct: 120 GKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVD 179
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
N +AI F M G+ P++ T VL AC+ G ++ G + K+ N +
Sbjct: 180 NDRPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGER-IHSFVKEKNFSSNAN 238
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G +D A ++ ++ D +W ++ H
Sbjct: 239 VSTALIDMYAKCGCIDGALEVFDET-LEKDVYVWTAIIAGLASH 281
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 316/541 (58%), Gaps = 36/541 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ S +E ++ MR++ + + F F +K C + G+++H V++ G
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF- 119
+ D+ + T+L+ LY A K+FD+IP+++ AW +IS YI + R+A+ +F
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 120 --------------------------DNLNRE---------ESGCKPDDVTCLLVLQACA 144
+ L +E G +PD + VL ACA
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
LGALE G + + + L +LI MY+KCG + A+EVF+GM +KD+V W+A
Sbjct: 259 RLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNA 318
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
ISGLAM+GH + A FG M+++G+ PD TF G+L AC+H GLVDEG + + M + F
Sbjct: 319 AISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVF 378
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
+ P I HYGC+VDLLGRAG LD+A+QL+ SM ++ ++ +W LLG CR+H+ L E V
Sbjct: 379 TLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGV 438
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
++ LI L+ SG+YVLL N+YS+ WE ++R M+E+G++ PG S I + GVVHE
Sbjct: 439 LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHE 498
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F+V D SHP +IY L E+ K LK +GYV L ++ EEK + + HSEKLAIA
Sbjct: 499 FLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIA 558
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+++T P IRV KNLR+C DCH K +S RE+I+RD RFH F +G CSC DY
Sbjct: 559 FGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDY 618
Query: 505 W 505
W
Sbjct: 619 W 619
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 165/376 (43%), Gaps = 48/376 (12%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
I+ F SL +HA +LR G DS L+ ++ F + + ++F + + +
Sbjct: 14 IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNI 73
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+N +I + N ++++ ++ ++ +E G PD T +L+ACA L + G K+H
Sbjct: 74 FLFNTMIHGLVLNDSFQESIEIYHSMRKE--GLSPDSFTFPFLLKACARLLDSKLGIKLH 131
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE--------------------------- 189
+ + G S + SL+++Y KCG + AF+
Sbjct: 132 GLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCR 191
Query: 190 -----------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
VF GM EKD+VSWS+MI G A NG ++A++ F M G PD
Sbjct: 192 EAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMV 251
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVL AC+ G ++ G + M ++ L N ++D+ + G +D A+++ M
Sbjct: 252 GVLCACARLGALELGNWASNLMDRN-EFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM-R 309
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD-YVLLLNLYSSVGDWEKVKE 357
K D +W + + HV + + + + G+ +V LL + G V E
Sbjct: 310 KKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAG---LVDE 366
Query: 358 LREFMN--EKGLQTTP 371
R++ N E+ TP
Sbjct: 367 GRQYFNSMERVFTLTP 382
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 306/494 (61%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ + +M + + F S + ++ +L+ G +IH +R+GY D + ++L
Sbjct: 218 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 277
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + ++C++F +PQ D ++WN +I+ ++N + L F + + KP
Sbjct: 278 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM--LIAKIKP 335
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ V+ ++ ACAHL L G+++H YI + + + ++L+ MY+KCG++ A +F
Sbjct: 336 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 395
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M D+VSW+AMI G A++GH DAI F M+ GV P+ F VL+ACSH GLVD
Sbjct: 396 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 455
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M++D+ I+P + HY V DLLGR G L++AY+ I+ M ++P ++W TLL A
Sbjct: 456 EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK++ L E+V + L + Q G YVLL N+YS+ G W+ ++LR M +KG++ P
Sbjct: 516 CRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 575
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
CS I +K VH FV D SHP + I + L + +Q++ GYV + T LH++ E+K
Sbjct: 576 ACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKR 635
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L HSE+LAI FG+++TP GTTIRV KNLR+CVDCH K +S + RE+++RD RF
Sbjct: 636 YLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRF 695
Query: 492 HHFREGRCSCNDYW 505
HHF++G+CSC D+W
Sbjct: 696 HHFKDGKCSCGDFW 709
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 43/313 (13%)
Query: 41 MKFCSLMGGLQ----IHARVLRDGYQLDSQLMTTLMDLYS---------TFEKSFEACK- 86
+K C+LM L+ +H ++R G D LM++YS T++K F+ K
Sbjct: 113 LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKT 172
Query: 87 -------------------LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+F+ +P+RD V+WN +IS +N DAL + + +
Sbjct: 173 SDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNAD- 231
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+PD T VL A L G++IH Y +GY + + + +SLI MY+KC + +
Sbjct: 232 -LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDS 290
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VF +P+ D +SW+++I+G NG + ++ F M A + P+ +F+ ++ AC+H
Sbjct: 291 CRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHL 350
Query: 248 GLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
+ G ++ R D N+ +VD+ + G + A + M + D
Sbjct: 351 TTLHLGKQLHGYIIRSRFD----GNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVS 405
Query: 305 WRTLLGACRIHKH 317
W ++ +H H
Sbjct: 406 WTAMIMGYALHGH 418
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 81/372 (21%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRN 109
Q+HA++LR S L++T++ +YS ++ +F+ +P T+AW +I CY +
Sbjct: 26 QLHAQILRTSLPSPS-LLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+L F + SG PD VL++C + L FGE +H I G G +
Sbjct: 85 GLFLHSLSFF--IQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142
Query: 170 LCNSLIAMYSKCGS-----------------------------LGMAFEVFKGMPEKDVV 200
CN+L+ MYSK S LG +VF+ MP++D+V
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH-------------- 246
SW+ +ISG A NG DA+ M A + PD T + VL +
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262
Query: 247 ---------------------CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
C VD+ + + GI N GCV + G+
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV-----QNGM 317
Query: 286 LDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL- 341
D+ + M +KP+ + +++ AC + LG+++ ++I +++ G+ +
Sbjct: 318 FDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII--RSRFDGNVFIA 375
Query: 342 --LLNLYSSVGD 351
L+++Y+ G+
Sbjct: 376 SALVDMYAKCGN 387
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 314/514 (61%), Gaps = 12/514 (2%)
Query: 1 MVRAYSMSSSPEEGF-----YLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHA 54
++RAYS +S+P F ++F +P + F SFA+K C + Q+H
Sbjct: 56 IIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHG 115
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
+ + G+ D + L+ +YS + A ++FD + RD V+W +I+ ++ + T +
Sbjct: 116 FINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVE 175
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ LF + E G ++ T + VL+ CA GAL G K+H + E G K N+C +L
Sbjct: 176 AIQLFQRM--LEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTAL 233
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I MYSKCG L A EVF + ++DV W+AMI GLA +G ++AIE F M+ V PD+
Sbjct: 234 IHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDE 293
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+T VLSA + GLV EG MF + + K + + PNI H+GC+VDLL + G L++A I
Sbjct: 294 RTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFIN 353
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK---AQESGDYVLLLNLYSSVGD 351
+M +KPD+ IWRTL+ AC++H ER+++HL EL+ A +SG Y+L N+Y+S G
Sbjct: 354 AMPMKPDAVIWRTLIWACKVHADTERAERLMKHL-ELQGMSAHDSGSYILASNVYASTGK 412
Query: 352 WEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI 411
W E+RE MN+KGL PG S I + GVVHEFV+ D HP +I+ LD++ +L+
Sbjct: 413 WCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRK 472
Query: 412 AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNF 471
GY +++ + + EEK L +HSEKLA+A+G++ T PG+ IR+ KNLR C DCH F
Sbjct: 473 EGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEF 532
Query: 472 AKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S VY R++I+RDR+RFHHF+ G CSC DYW
Sbjct: 533 MKLISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 566
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/507 (40%), Positives = 317/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +E L++ M + + + + C + S+ G Q+H+ + G
Sbjct: 168 MISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG 227
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLYS + AC LF + ++D ++WN LI + ++AL LF
Sbjct: 228 FGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQ 287
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L VL ACAHLGA++ G IH YI++ G + +L SLI MY
Sbjct: 288 EMLR--SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMY 345
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF M + + SW+AMI G AM+G A + F M++ G+ PDD TF
Sbjct: 346 AKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFV 405
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G MS+D+ I P + HYGC++DLLG GL +A ++I +M +
Sbjct: 406 GLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPM 465
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V LGE ++LI+++ + G YVLL N+Y++ G W++V ++
Sbjct: 466 EPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKI 525
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY+ML+E+ ++ G+V +
Sbjct: 526 RTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDT 585
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 586 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 645
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+I RDR R H ++G SC+DYW
Sbjct: 646 YKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 178/347 (51%), Gaps = 35/347 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R ++++S L+ M + N ++ F +K C K +L+ G QIH VL+ G
Sbjct: 36 MFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLG 95
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSF---------------------EACKLFD 89
Y LD + T+L+ +Y+ F++S A KLFD
Sbjct: 96 YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFD 155
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EI +D V+WN +IS Y+ ++AL L+ ++ + + KPD+ T + V+ ACA G++
Sbjct: 156 EISVKDVVSWNAMISGYVETCNFKEALELYKDMMK--TNVKPDESTMVTVVSACAQSGSI 213
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N LI +YSKCG + A +F+G+ +KDV+SW+ +I G
Sbjct: 214 ELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGH 273
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-GILP 268
++A+ F M R+G P+D T VL AC+H G +D G ++K G+
Sbjct: 274 THMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTN 333
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G ++ A Q+ SM + S+ W ++ +H
Sbjct: 334 ASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS-WNAMIFGFAMH 379
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 50/330 (15%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+ I + + + WN + + N + AL L+ + G P+ + +L++C
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLY--VCMISLGLLPNSYSFPFLLKSC 75
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A AL G++IH ++ + GY M + SLI+MY++ G L A +VF + VVS++
Sbjct: 76 AKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYT 135
Query: 204 AMISGLAMNGH-------------------------------GRDAIESFGAMQRAGVFP 232
A+I+G A G+ ++A+E + M + V P
Sbjct: 136 ALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKP 195
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D+ T V+SAC+ G ++ G L +D G NI ++DL + G ++ A L
Sbjct: 196 DESTMVTVVSACAQSGSIELGRQ-LHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--- 348
+ K D W TL+G H H+ L + + E L++ ES + V +L++ +
Sbjct: 255 FQGLA-KKDVISWNTLIGG---HTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 310
Query: 349 -----VGDWEKV---KELREFMNEKGLQTT 370
+G W V K L+ N L T+
Sbjct: 311 LGAIDIGRWIHVYINKRLKGVTNASSLLTS 340
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A +F+ + E +++ W+ M G A+N A++ + M G+ P+ +F +L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
C+ + EG + K G +++ ++ + + G L+ A+++
Sbjct: 75 CAKSKALIEGQQIHGHVLK-LGYDLDMYVNTSLISMYAQNGRLEDAHKV 122
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/541 (41%), Positives = 328/541 (60%), Gaps = 37/541 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ----KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARV 56
M+R YS + +E +LF +M ++ + + +F I C SL+ G +H V
Sbjct: 145 MIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMV 204
Query: 57 LRDGYQLDSQLMTTLMDLYSTF------EKSFE-------------------------AC 85
++ G++ + + +++++ S F K F AC
Sbjct: 205 VKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRAC 264
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+LF+ +P R+ V+W V+IS ++ R +AL F N+ ++ P++ + VL ACAH
Sbjct: 265 ELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDR-VNPNEAVLVCVLSACAH 323
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G IH YI + G N+ +LI MY+KCG + A VF G+ ++DV+S+++M
Sbjct: 324 LGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSM 383
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
ISGL+ +G G+DA+ F M V P++ T GVL+ CSH GLV+EG L M +G
Sbjct: 384 ISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWG 443
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P I HYGC +DLLGRAG L++A +++ +M ++PD IWR LL A RIH +V LGE++I
Sbjct: 444 IAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQII 503
Query: 326 EHLIELKAQE-SGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
H+ +LK+ + +G VLL NLY+S+G WE+V E+R+ M ++ +++PGCS I + G+VHE
Sbjct: 504 SHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHE 563
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F V D HP+I EI L+EI K+L GY A +L EEK A+++HSEKLAIA
Sbjct: 564 FRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAWHSEKLAIA 623
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+++T PGT IR+ KNLR C DCH+ K +S VY RE+++RDR RFH F EG CSC D+
Sbjct: 624 FGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIEGDCSCKDF 683
Query: 505 W 505
W
Sbjct: 684 W 684
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 16/296 (5%)
Query: 26 IPTNPFACSFAIKCCMKFC-----SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
IPTNP L QIHA+V+ ++ L +L+ Y +
Sbjct: 62 IPTNPIPIDLPNPQTFSLLLNQRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKN 121
Query: 81 SFEACKLFDEIPQRDTVA--WNVLISCYIRNQRTRDALCLFDNLNREESGCK--PDDVTC 136
A LFD P WNV+I Y + + +++ + LF + + + PD+ T
Sbjct: 122 HPNARILFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTF 181
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
V+ +C+H +L +GE +H + + G+ S + + NS+I M S + A +VF M E
Sbjct: 182 TFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSE 241
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+DV SW++++ G A +G A E F M +D ++ ++S CG E + F
Sbjct: 242 RDVFSWTSLLGGYAKHGEMDRACELFNMMP----VRNDVSWAVMISGFLGCGRYPEALTF 297
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLL 309
M D + PN CV+ G LDQ + I +G++ S I L+
Sbjct: 298 FCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALI 353
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/509 (41%), Positives = 309/509 (60%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC----MKFCSLMGGLQIHARV 56
+ RA +M +E L+ +M IP++ F +F +K C + L G +IHA +
Sbjct: 150 LFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHI 209
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR GY+ + +MTTL+D+Y+ F A +F +P ++ V+W+ +I+C+ +N+ AL
Sbjct: 210 LRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKAL 269
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + E P+ VT + VLQACA L ALE G+ IH YI G S + + N+LI
Sbjct: 270 ELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALIT 329
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY +CG + M VF M +DVVSW+++IS M+G G+ AI+ F M G P +
Sbjct: 330 MYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYIS 389
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+EG + + M + I P + HY C+VDLLGRA LD+A +LI M
Sbjct: 390 FITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 449
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+P T+W +LLG+CRIH +V L ER L EL+ + +G+YVLL ++Y+ W + K
Sbjct: 450 HFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAK 509
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+ + + +GLQ PGCS I +K V+ FV D +P+I EI+ +L +++ ++K GYV
Sbjct: 510 SVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVP 569
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L++L EEK + HSEKLA+AFG++ T G TIR+ KNLR+C DCH K +S
Sbjct: 570 QTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFIS 629
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+++RD RFHHF++G CSC DYW
Sbjct: 630 KFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 167/356 (46%), Gaps = 20/356 (5%)
Query: 29 NPFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
NP +F I C + SL GL +H R++ G+ D L T L+++Y A K
Sbjct: 75 NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARK 134
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA-- 144
+FDE +R WN L ++ L L+ +N G D T VL+AC
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNW--IGIPSDRFTYTFVLKACVVS 192
Query: 145 --HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+ L+ G++IH +I HGY + +++ +L+ +Y+K GS+ A VF MP K+ VSW
Sbjct: 193 ELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252
Query: 203 SAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FL 257
SAMI+ A N A+E F M + P+ T VL AC+ +++G + ++
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYI 312
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
R D ILP ++ ++ + GR G + ++ +M + D W +L+ +H
Sbjct: 313 LRRGLD-SILPVLN---ALITMYGRCGEILMGQRVFDNMKNR-DVVSWNSLISIYGMHGF 367
Query: 318 VTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
++ E++I + S ++ +L S G E+ K L E M K + PG
Sbjct: 368 GKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSK-YRIHPG 422
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 129 CKPDDV--TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
C+P+ T ++ +CA +L G +HR + G+ L LI MY + GS+
Sbjct: 72 CEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDR 131
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A +VF E+ + W+A+ LAM G G++ ++ + M G+ D T+T VL AC
Sbjct: 132 ARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKAC-- 189
Query: 247 CGLVDEGMMFLDRMSKDF-------GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+V E + + K+ G NIH ++D+ + G + A + +M K
Sbjct: 190 --VVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK 247
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES-GDYVLLLNLYSS---VGDWEKV 355
+ W ++ AC + + + L+ L+A +S + V ++N+ + + E+
Sbjct: 248 -NFVSWSAMI-ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQG 305
Query: 356 KELREFMNEKGLQT 369
K + ++ +GL +
Sbjct: 306 KLIHGYILRRGLDS 319
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 312/507 (61%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS E +LF +M N F + + C G QIH+ V++
Sbjct: 82 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++L+D+Y+ K EA ++FD +P+RD V+ +IS Y + +AL LF
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L RE G + + VT VL A + L AL+ G ++H ++ + L NSLI MYSK
Sbjct: 202 RLQRE--GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 259
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTG 239
CGSL + +F MPE+ V+SW+AM+ G + +G GR+A+E F M+ V PD TF
Sbjct: 260 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 319
Query: 240 VLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH G+ D G+ +F + +++ G P I HYGCVVDL GRAG +++A++ I M
Sbjct: 320 VLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPF 379
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + IW +LLGACR+H++V +GE V L+E++++ +G+YV+L NLY+S G W+ V+ +
Sbjct: 380 EPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTV 439
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M EK + PG S I L +H F D SHPR E++ + E++ ++K AGYV E+
Sbjct: 440 RELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPEL 499
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+AFG++ TP GT +R+ KNLRICVDCHNFAK LS V
Sbjct: 500 SCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRV 559
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y REV +RD+ RFHH G CSC DYW
Sbjct: 560 YGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 48/371 (12%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C+ ++ G ++HA +++ Y+ L T L+ LY+ +A ++ DE+P+R+ V+W
Sbjct: 20 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 79
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+IS Y + +AL LF + SG P++ T VL +C + G +IH +
Sbjct: 80 TAMISGYSQRGYASEALHLFVEMLM--SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLV 137
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ + S + + +SL+ MY+K G + A VF G+PE+DVVS +A+ISG A G +A+
Sbjct: 138 IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEAL 197
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM-------------------FLDRM 260
+ F +QR G+ + T+ VL+A S +D G +D
Sbjct: 198 DLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMY 257
Query: 261 SK---------DFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIW 305
SK F +P + + ++ + GL +A +L M VKPDS +
Sbjct: 258 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 317
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWEKVKELR 359
+L C H + +R +E E+ Q+ G Y +++L+ G +V+E
Sbjct: 318 LAVLSGC---SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG---RVEEAF 371
Query: 360 EFMNEKGLQTT 370
EF+ + + T
Sbjct: 372 EFIKKMPFEPT 382
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL C A+ G+++H ++ + Y + L LI +Y+KC LG A V MPE++
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
VVSW+AMISG + G+ +A+ F M +G P++ TF VL++C+
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/440 (44%), Positives = 291/440 (66%), Gaps = 5/440 (1%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+T ++ Y+ +A +LFD +P +D + WN +I Y ++ R +AL LF + R S
Sbjct: 199 VTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLR--S 256
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN--LCNSLIAMYSKCGSLG 185
G PD+V +L L A A LG E G +H Y+ ++ ++N + +LI MY KCGSL
Sbjct: 257 GVDPDEVAIILALSAVAQLGTAESGRWLHSYV-KNSRRVQLNARVGTALIDMYCKCGSLE 315
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A VF + +KD+V W+AMI+G AM+G R A+E F ++ G++P D TF G+L+ACS
Sbjct: 316 DAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACS 375
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLVDEG F M +++ I+P I HYGC+VDLLGRAGL+++A+ L+ SM + PD+ +W
Sbjct: 376 HSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMW 435
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+LL ACR+HK++ LG+++ ++L+ SG Y+LL N+Y++VG+WE+V +R M
Sbjct: 436 VSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKAS 495
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
G+Q PGCS I + V+EFV D+SHPR +EIY ML+++N +K G+V + LH+L
Sbjct: 496 GIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDL 555
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
K AL+ HSEKLA+AFG+++T PG TI++ KNLR C DCH K++S + R+++
Sbjct: 556 DEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVF 615
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RDR RFHHF +G C+C DYW
Sbjct: 616 RDRNRFHHFVDGSCTCGDYW 635
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 5/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ P E LF M + + + A A+ + + G +H+ V
Sbjct: 233 MIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSR 292
Query: 61 -YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
QL++++ T L+D+Y +A +F+ I +D V WN +I+ Y + +R AL +F
Sbjct: 293 RVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMF 352
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMY 178
L + G P D+T + +L AC+H G ++ G + + + E+ K+ ++ +
Sbjct: 353 SQLRSQ--GLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLL 410
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + AF + + M D V W ++++
Sbjct: 411 GRAGLIEEAFHLVQSMTIAPDTVMWVSLLAA 441
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 132/351 (37%), Gaps = 46/351 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI-RN 109
++HA +R G D + L Y+ ++ L P TV + I + R
Sbjct: 53 ELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRG 112
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
L + L R G P T L AC L G +H Y +
Sbjct: 113 LHLAALALLSEMLGR---GLIPTSHTLSSSLPACH---GLALGRALHAYAFKLALAGDSY 166
Query: 170 LCNSLIAM-------------------------------YSKCGSLGMAFEVFKGMPEKD 198
+ +L+ M Y+K G+L A E+F GMP KD
Sbjct: 167 VATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKD 226
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+ W+AMI G +G +A+ F M R+GV PD+ LSA + G + G
Sbjct: 227 FICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHS 286
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ + N ++D+ + G L+ A + S+G K D +W ++ +H
Sbjct: 287 YVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDK-DIVVWNAMINGYAMHGD- 344
Query: 319 TLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ +E +L++Q ++ LLN S G ++ + + M E+
Sbjct: 345 --SRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 393
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/440 (44%), Positives = 291/440 (66%), Gaps = 5/440 (1%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+T ++ Y+ +A +LFD +P +D + WN +I Y ++ R +AL LF + R S
Sbjct: 198 VTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLR--S 255
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN--LCNSLIAMYSKCGSLG 185
G PD+V +L L A A LG E G +H Y+ ++ ++N + +LI MY KCGSL
Sbjct: 256 GVDPDEVAIILALSAVAQLGTAESGRWLHSYV-KNSRRVQLNARVGTALIDMYCKCGSLE 314
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A VF + +KD+V W+AMI+G AM+G R A+E F ++ G++P D TF G+L+ACS
Sbjct: 315 DAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACS 374
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLVDEG F M +++ I+P I HYGC+VDLLGRAGL+++A+ L+ SM + PD+ +W
Sbjct: 375 HSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMW 434
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+LL ACR+HK++ LG+++ ++L+ SG Y+LL N+Y++VG+WE+V +R M
Sbjct: 435 VSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKAS 494
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
G+Q PGCS I + V+EFV D+SHPR +EIY ML+++N +K G+V + LH+L
Sbjct: 495 GIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDL 554
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
K AL+ HSEKLA+AFG+++T PG TI++ KNLR C DCH K++S + R+++
Sbjct: 555 DEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVF 614
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RDR RFHHF +G C+C DYW
Sbjct: 615 RDRNRFHHFVDGSCTCGDYW 634
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 5/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ P E LF M + + + A A+ + + G +H+ V
Sbjct: 232 MIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSR 291
Query: 61 -YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
QL++++ T L+D+Y +A +F+ I +D V WN +I+ Y + +R AL +F
Sbjct: 292 RVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMF 351
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMY 178
L + G P D+T + +L AC+H G ++ G + + + E+ K+ ++ +
Sbjct: 352 SQLRSQ--GLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLL 409
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + AF + + M D V W ++++
Sbjct: 410 GRAGLIEEAFHLVQSMTIAPDTVMWVSLLAA 440
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 132/351 (37%), Gaps = 46/351 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI-RN 109
++HA +R G D + L Y+ ++ L P TV + I + R
Sbjct: 52 ELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRG 111
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
L + L R G P T L AC L G +H Y +
Sbjct: 112 LHLAALALLSEMLGR---GLIPTSHTLSSSLPACH---GLALGRALHAYAFKLALAGDSY 165
Query: 170 LCNSLIAM-------------------------------YSKCGSLGMAFEVFKGMPEKD 198
+ +L+ M Y+K G+L A E+F GMP KD
Sbjct: 166 VATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKD 225
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+ W+AMI G +G +A+ F M R+GV PD+ LSA + G + G
Sbjct: 226 FICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHS 285
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ + N ++D+ + G L+ A + S+G K D +W ++ +H
Sbjct: 286 YVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDK-DIVVWNAMINGYAMHGD- 343
Query: 319 TLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ +E +L++Q ++ LLN S G ++ + + M E+
Sbjct: 344 --SRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 392
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 310/568 (54%), Gaps = 65/568 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACS------------------------- 34
M+RAY S +P+E LF +MR Q+ IP + ++ S
Sbjct: 75 MIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKI 134
Query: 35 ------FAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
F ++ + G ++I +L + D L+ Y + A LF
Sbjct: 135 GLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLF 194
Query: 89 DEIPQRDTVAWNVLI-------------------------------SCYIRNQRTRDALC 117
D +P+RD V+WN +I + Y + +++ +AL
Sbjct: 195 DRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALR 254
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + + + PD VT + VL AC +GAL G+ IH I + + L SL+ M
Sbjct: 255 LFHEM--QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDM 312
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG + + VF GM +DV +WSAMI GLA +G G A++ F M + P+D TF
Sbjct: 313 YAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTF 372
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVLSACSH GLVDEG + MSK + + P I HYGCVVD+LGRAG L +A +LI SM
Sbjct: 373 IGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMP 432
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
PD+ +WR LLGACRI+K+V + E +L+EL+ G+YVLL N+YS +W+KV
Sbjct: 433 FAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVN 492
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R M +Q PG S+I + VHEFV D SHP +I +ML EI +LK GY
Sbjct: 493 VRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPL 552
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
S L + +EK NAL++HSEKLAIAFG+L+T PG+TIR+ KNLR+C DCH K++S
Sbjct: 553 TASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISR 612
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
Y R +I+RDR RFHHF G CSC DYW
Sbjct: 613 TYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 73/352 (20%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLY---STFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
+QIHA +++ ++ ++ L+ S+ A +FDEIP DT WN +I Y
Sbjct: 20 IQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCL-LVLQACAHLGALEFGEKIHRYISEHGYG 165
+ +Q ++++ LF + +E C P D L LV+QAC L G+K+H + + G G
Sbjct: 80 LNSQNPQESMSLFFQMRHQE--CIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLG 137
Query: 166 SKMNLCNSLIAMYSK-------------------------------CGSLGMAFEVFKGM 194
S + + +LI MY+K G + +A ++F M
Sbjct: 138 SDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRM 197
Query: 195 PEKDVVSWSAMISGLAMNG-------------------------------HGRDAIESFG 223
PE+D+VSW+ MI G A G +A+ F
Sbjct: 198 PERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFH 257
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
MQ A V PD T VLSAC G + G M + + ++ I ++ +VD+ +
Sbjct: 258 EMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN-RIEIDLKLGTSLVDMYAKC 316
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
G +D + ++ M + D W ++ H GE ++H ++ +++
Sbjct: 317 GDIDNSLRVFNGMNNR-DVFAWSAMIMGLANH---GFGELALDHFSKMISED 364
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/505 (41%), Positives = 310/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +S + EE LF M + I N S +K + QIHA L+ G
Sbjct: 284 VISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSG 343
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D+ ++ +L+D Y +A ++F+E P D V + L++ Y ++ + +AL L+
Sbjct: 344 FEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLY- 402
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L ++ G KPD C +L ACA L A E G+++H +I + G+ S + NSL+ MY+K
Sbjct: 403 -LEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAK 461
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F +P + +VSWSAMI GLA +G+G++A++ F M + GV P+ T V
Sbjct: 462 CGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSV 521
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H GLV E + + M FGI P HY C++DLLGRAG L+ A +L+ M +
Sbjct: 522 LCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQA 581
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LLGA RIHK++ LGE+ E L+ L+ ++SG +VLL N+Y+SVG W+KV +R
Sbjct: 582 NALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRR 641
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ PG S + +K V+ F+V D SH R EIY LDE++ LK AGYV +
Sbjct: 642 LMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEI 701
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH++ EK L +HSEKLA+AFG++ATPPG IRV KNLRIC DCH K +S + +
Sbjct: 702 DLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVS 761
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHFREG CSC +YW
Sbjct: 762 REIIVRDTNRFHHFREGSCSCGEYW 786
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 174/385 (45%), Gaps = 40/385 (10%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y S E LF M I N F+ S I C + G +IH +++ GY D
Sbjct: 86 YVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSD 145
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ L+D+Y+ +A +FDEI + D V+WN +I+ + ++ AL L +N+
Sbjct: 146 AFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNK 205
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
SG P+ T L+ACA + E G ++H + + GS L LI MYSKC S+
Sbjct: 206 --SGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSM 263
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VFK MPE+D+++W+A+ISG + N +A F M G+ + T + VL +
Sbjct: 264 DDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSI 323
Query: 245 S-----------HCGLVDEGMMF----LDRMSKDFGI------LPNIHHYGCVVDLL--- 280
+ H + G F ++ + +G + +VDL+
Sbjct: 324 AALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFT 383
Query: 281 ------GRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
+ G ++A +L M G+KPDS + +LL AC G++V H+++
Sbjct: 384 SLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKF 443
Query: 332 KAQE---SGDYVLLLNLYSSVGDWE 353
+G+ L+N+Y+ G E
Sbjct: 444 GFMSDIFAGNS--LVNMYAKCGSIE 466
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 119/228 (52%), Gaps = 2/228 (0%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
I N FA +K C L+ G Q+H V+ G+ D + +L+ LY+ +A
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
LFD IP R V+WN L SCY+ + +A+ LF ++ SG +P++ + ++ C
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVL--SGIRPNEFSLSSMINVCTG 123
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G KIH Y+ + GY S N+L+ MY+K G L A VF + + D+VSW+A+
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
I+G ++ + A+E M ++G+ P+ T + L AC+ L + G
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELG 231
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G K ++ VL+AC L G+++H + G+ S + NSL+ +Y+KCG G A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+F +P++ VVSW+A+ S + +A+ F M +G+ P++ + + +++ C+
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT-- 122
Query: 248 GLVD--EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
GL D +G + K G + +VD+ + G+L+ A + + KPD W
Sbjct: 123 GLEDSVQGRKIHGYLIK-LGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVSW 180
Query: 306 RTLLGACRIHKHVTLGERVIEHLIEL 331
++ C +H++ R +E L E+
Sbjct: 181 NAIIAGCVLHEY---HHRALELLREM 203
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/505 (40%), Positives = 306/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + LF +M ++ I + F + + C L G +H + +
Sbjct: 323 MIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENK 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q D + LMD+Y+ +A +F E+ +D V+WN +I Y +N +AL LF
Sbjct: 383 MQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFV 442
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KP+ +T +L ACA L ALE G++IH +I +G+ ++ N+L+ MY K
Sbjct: 443 EM---QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 499
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+LG+A +F +PEKD+VSW+ MI+G M+G+G +AI +F M+ +G+ PD+ +F +
Sbjct: 500 CGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISI 559
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+DEG F + M + I P HY C+VDLL RAG L +AY+ I M ++P
Sbjct: 560 LYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEP 619
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRI+ V L E+V EH+ EL+ + +G YVLL N+Y+ WE+VK+LRE
Sbjct: 620 DATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRE 679
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ +GL+ PGCS I +KG VH FV D SHP N+I +L + ++K G+ ++
Sbjct: 680 RIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRY 739
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L EK AL HSEK+A+AFG+L+ PPG T+RV KNLR+C DCH AK +S +
Sbjct: 740 ALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVK 799
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF++G CSC +W
Sbjct: 800 RDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 5/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E+G LFE+M I T+ + C L+ G +H ++
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L L+D+YS A ++F+ + +R V+W +I+ Y R + ++ LF
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G PD T +L ACA G LE G+ +H YI E+ S + + N+L+ MY+K
Sbjct: 342 EMEKE--GISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAK 399
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+G A VF M KD+VSW+ MI G + N +A+ F MQ P+ T +
Sbjct: 400 CGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNSITMACI 458
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ ++ G + ++ G + H +VD+ + G L A +L+ M +
Sbjct: 459 LPACASLAALERGQEIHGHILRN-GFSLDRHVANALVDMYLKCGALGLA-RLLFDMIPEK 516
Query: 301 DSTIWRTLLGACRIHKH 317
D W ++ +H +
Sbjct: 517 DLVSWTVMIAGYGMHGY 533
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A KLFDE+ RD ++WN +IS Y+ N + L LF+ + G D T + V+ C
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLL--LGINTDLATMVSVVAGC 261
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
++ G L G +H Y + +G ++ L N L+ MYSK G+L A +VF+ M E+ VVSW+
Sbjct: 262 SNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWT 321
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MI+G A G ++ F M++ G+ PD T T +L AC+ GL++ G + + K+
Sbjct: 322 SMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI-KE 380
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ ++ ++D+ + G + A+ + + M VK D W T++G
Sbjct: 381 NKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG 427
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 84/212 (39%), Gaps = 58/212 (27%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL-------------- 184
VLQ CA L +++ G +IH I + L + L+ MY CG L
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166
Query: 185 ---------GMA--------FEVFKGMPE------------------KDVVSWSAMISGL 209
G A +FK M E +DV+SW++MISG
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
NG ++ F M G+ D T V++ CS + GM+ L R + I +
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCS-----NTGMLLLGRALHGYAIKAS 281
Query: 270 ----IHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+ C++D+ ++G L+ A Q+ +MG
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMG 313
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/508 (42%), Positives = 306/508 (60%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++A S + + +M RI + + + IK C L G +H+ V G
Sbjct: 79 LIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y DS + L+ Y+ A K+FDE+PQR VAWN +IS Y +N +A+ +F+
Sbjct: 139 YASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFN 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ES +PD T + VL AC+ LG+L+FG +H I G + L SL+ M+S+
Sbjct: 199 KM--RESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSR 256
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG +G A VF M E +VV W+AMISG M+G+G +A+E F M+ GV P+ TF V
Sbjct: 257 CGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAV 316
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GL+DEG M +++G++P + H+ C+VD+ GR GLL++AYQ + G+
Sbjct: 317 LSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVK--GLNS 374
Query: 301 DS---TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
D +W +LGAC++HK+ LG V E+LI + + G YVLL N+Y+ G ++V+
Sbjct: 375 DELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVES 434
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R M ++GL+ G STI + + F + D SHP NEIY LDE+ + K AGY
Sbjct: 435 VRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPV 494
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
S +H L EE+ AL YHSEKLA+AFG++ T G T+R+ KNLRIC DCH+ K +S
Sbjct: 495 PESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISA 554
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
V NRE+I+RD+LRFHHFREG CSC+DYW
Sbjct: 555 VMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
V+ A HL L+ + H ++ G L L+ + GS+ +F+ + + D
Sbjct: 16 VVSAGPHLRRLQ---QAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPD 72
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM--- 255
++++I + G DA+ + M + + P TFT V+ AC+ L+ G +
Sbjct: 73 SFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHS 132
Query: 256 --FLDRMSKD-----------------------FGILP--NIHHYGCVVDLLGRAGLLDQ 288
F+ + D F +P +I + ++ + GL ++
Sbjct: 133 HVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANE 192
Query: 289 AYQLITSM---GVKPDSTIWRTLLGAC 312
A ++ M V+PDS + ++L AC
Sbjct: 193 AVEVFNKMRESRVEPDSATFVSVLSAC 219
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/507 (40%), Positives = 317/507 (62%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R Y+ + L+ +MR + + F +K K + G IH+ V+R
Sbjct: 91 LIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRS 150
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + +L+ LY+ A K+FD++P++D VAWN +I+ + N + +AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + G KPD T + +L ACA +GAL G++ H Y+ + G ++ N L+ +Y+
Sbjct: 211 TEMDLK--GIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFT 238
+CG + A +F M +K+ VSW+++I GLA+NG G++AIE F M+ + G+ P + TF
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFV 328
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L ACSHCG+V EG + RMS+++ I P I H+GC+VDLL RAG + +AY+ I M +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPM 388
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P+ IWRTLLGAC +H L E +++L+ SGDYVLL N+Y+S W V+++
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G++ PG S + + VHEF++ D SHP+ + IY L E+ +L++ GYV +I
Sbjct: 449 RKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQI 508
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
++ ++ EEK NAL YHSEK+AIAF +++TP IRV KNL++C DCH K++S V
Sbjct: 509 SNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKV 568
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE+++RDR RFHHF+ G CSC DYW
Sbjct: 569 YNREIVVRDRSRFHHFKNGSCSCQDYW 595
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 312/507 (61%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS E +LF +M N F + + C G QIH+ V++
Sbjct: 549 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++L+D+Y+ K EA ++FD +P+RD V+ +IS Y + +AL LF
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 668
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L RE G + + VT VL A + L AL+ G ++H ++ + L NSLI MYSK
Sbjct: 669 RLQRE--GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 726
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTG 239
CGSL + +F MPE+ V+SW+AM+ G + +G GR+A+E F M+ V PD TF
Sbjct: 727 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 786
Query: 240 VLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH G+ D G+ +F + +++ G P I HYGCVVDL GRAG +++A++ I M
Sbjct: 787 VLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPF 846
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + IW +LLGACR+H++V +GE V L+E++++ +G+YV+L NLY+S G W+ V+ +
Sbjct: 847 EPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTV 906
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M EK + PG S I L +H F D SHPR E++ + E++ ++K AGYV E+
Sbjct: 907 RELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPEL 966
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+AFG++ TP GT +R+ KNLRICVDCHNFAK LS V
Sbjct: 967 SCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRV 1026
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y REV +RD+ RFHH G CSC DYW
Sbjct: 1027 YGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 48/371 (12%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C+ ++ G ++HA +++ Y+ L T L+ LY+ +A ++ DE+P+R+ V+W
Sbjct: 487 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 546
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+IS Y + +AL LF + SG P++ T VL +C + G +IH +
Sbjct: 547 TAMISGYSQRGYASEALHLF--VEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLV 604
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ + S + + +SL+ MY+K G + A VF G+PE+DVVS +A+ISG A G +A+
Sbjct: 605 IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEAL 664
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM-------------------FLDRM 260
+ F +QR G+ + T+ VL+A S +D G +D
Sbjct: 665 DLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMY 724
Query: 261 SK---------DFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIW 305
SK F +P + + ++ + GL +A +L M VKPDS +
Sbjct: 725 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 784
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWEKVKELR 359
+L C H + +R +E E+ Q+ G Y +++L+ G +V+E
Sbjct: 785 LAVLSGC---SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG---RVEEAF 838
Query: 360 EFMNEKGLQTT 370
EF+ + + T
Sbjct: 839 EFIKKMPFEPT 849
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL C A+ G+++H ++ + Y + L LI +Y+KC LG A V MPE++
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
VVSW+AMISG + G+ +A+ F M +G P++ TF VL++C+
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 589
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 315/537 (58%), Gaps = 33/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKF---------CSLM---- 47
M+ + SP++ LF+KM + + + + C K CS +
Sbjct: 205 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR 264
Query: 48 ------------------GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD 89
G ++ R+ + D+ TT++D Y+ E A ++ +
Sbjct: 265 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 324
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P++D VAWN LIS Y +N + +AL +F L +++ K + +T + L ACA +GAL
Sbjct: 325 AMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKN-IKLNQITLVSTLSACAQVGAL 383
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G IH YI ++G + ++LI MYSKCG L A EVF + ++DV WSAMI GL
Sbjct: 384 ELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGL 443
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G G +A++ F MQ A V P+ TFT V ACSH GLVDE +M +GI+P
Sbjct: 444 AMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPE 503
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HY C+VD+LGR+G L++A + I +M + P +++W LLGAC+IH +++L E L+
Sbjct: 504 DKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLL 563
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ + G +VLL N+Y+ G W+ V ELR+ M GL+ PGCS+I + G++HEF+ D
Sbjct: 564 ELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 623
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVL 448
+HP ++Y L E+ ++LK GY E++ L + EE K +L+ HSEKLAI +G++
Sbjct: 624 NAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLI 683
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+T IRV KNLR+C DCH AK++S +YNRE+I+RDR RFHHFR G+CSCND+W
Sbjct: 684 STEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 159/349 (45%), Gaps = 38/349 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RAY+ P + F M + + N + F IK + SL G +H ++
Sbjct: 102 LIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIK 161
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D + +L+ Y + ACK+F I ++D V+WN +I+ +++ AL L
Sbjct: 162 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 221
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E+ K VT + VL ACA + LEFG ++ YI E+ + L N+++ MY
Sbjct: 222 FKKMESED--VKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMY 279
Query: 179 SKCGSL-------------------------------GMAFEVFKGMPEKDVVSWSAMIS 207
+KCGS+ A EV MP+KD+V+W+A+IS
Sbjct: 280 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALIS 339
Query: 208 GLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
NG +A+ F +Q + + + T LSAC+ G ++ G + K+ GI
Sbjct: 340 AYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKN-GI 398
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
N + ++ + + G L++A ++ S+ K D +W ++G +H
Sbjct: 399 KMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMH 446
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFEACKLFDEIPQRDTVAWN 100
CS + L Q HA ++R G D + L + S+F A K+FDEIPQ ++ WN
Sbjct: 41 CSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWN 100
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
LI Y ++ F ++ ES C P+ T +++A A + +L G+ +H
Sbjct: 101 TLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAI 160
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
+ GS + + NSLI Y CG L A +VF + EKDVVSW++MI+G G A+E
Sbjct: 161 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 220
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
F M+ V T GVLSAC+ ++ G + ++ + N+ ++D+
Sbjct: 221 LFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEEN-RVNVNLTLANAMLDMY 279
Query: 281 GRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ G ++ A +L +M K D+ W T+L I + V+
Sbjct: 280 TKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVL 323
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/536 (40%), Positives = 305/536 (56%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + EE +F +M + + + C + G IH V+R G
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLF-------------------------------D 89
+ L L+ +YS + +A KLF D
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P++D V+W+ +IS Y ++ + L LF + + +PD+ + V+ AC HL AL
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ--IRPDETILVSVISACTHLAAL 452
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G+ +H YI ++G + L +L+ MY KCG + A EVF GM EK V SW+A+I GL
Sbjct: 453 DQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGL 512
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A+NG +++ F M+ GV P++ TF GVL AC H GLVDEG M + GI PN
Sbjct: 513 AVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPN 572
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VDLLGRAGLL++A +LI SM + PD W LLGAC+ H +GERV LI
Sbjct: 573 VKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLI 632
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ G +VLL N+++S GDWE V E+R M ++G+ TPGCS I GVVHEF+ D
Sbjct: 633 ELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGD 692
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
+HP IN++ ML+E+ K+LK+ GY + ++ EEK L HSEKLAIAFG+L
Sbjct: 693 KTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLT 752
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
P T IR+ KNLRIC DCH AK++S Y RE+++RDR RFH+F+EG CSC DYW
Sbjct: 753 ISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 55/318 (17%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY S+S E+ L++ M + + + + ++ C GG +IH VL+ G
Sbjct: 112 MMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVG 171
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + TL+++Y+ +A KLFDE P D+V+WN +++ Y++ +A +FD
Sbjct: 172 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFD 231
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + NS+I + K
Sbjct: 232 QMPQR-----------------------------------------NIVASNSMIVLLGK 250
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A+++F M EKD+VSWSA+ISG NG +A+ F M G+ D+ V
Sbjct: 251 MGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 310
Query: 241 LSACSHCGLVDEGMM---FLDRMS-KDFGILPN--IHHYGCVVDLLGRAGLLDQAYQLIT 294
LSAC+H +V G M + RM + + L N IH Y +++ L + ++ L
Sbjct: 311 LSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNL-- 368
Query: 295 SMGVKPDSTIWRTLLGAC 312
D W +++ C
Sbjct: 369 ------DQISWNSMISGC 380
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 23/283 (8%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
+ ++FD I + WN ++ YI++ AL L+ + + G PD+ T LV+QAC
Sbjct: 94 SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVG--PDNYTYPLVVQAC 151
Query: 144 AHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
A + LEFG K IH ++ + G+ S + + N+LI MY+ CG++ A ++F P D VSW
Sbjct: 152 A-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+++++G G +A F M + + + ++ G V E + M +
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVASNS----MIVLLGKMGQVMEAWKLFNEMDE 266
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVT 319
++ + ++ + G+ ++A + M G++ D + ++L AC H +
Sbjct: 267 -----KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACA-HLSIV 320
Query: 320 LGERVIEHLIELKAQESGDYV----LLLNLYSSVGDWEKVKEL 358
++I L+ ES YV L+++YS G+ ++L
Sbjct: 321 KTGKMIHGLVIRMGIES--YVNLQNALIHMYSGSGEIMDAQKL 361
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/501 (41%), Positives = 297/501 (59%), Gaps = 29/501 (5%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
+F +K CSL G +H + ++ G D + T L+D+Y+ A +LFD++P+
Sbjct: 145 AFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 204
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC------------------------ 129
R V+ +++CY + A LF+ + + C
Sbjct: 205 RSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM 264
Query: 130 -----KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
P++VT L VL AC LGALE G IH YI G +++ +LI MYSKCGSL
Sbjct: 265 LVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSL 324
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF + +KDVV+W++MI G AM+G + A++ F M G P D TF G+LSAC
Sbjct: 325 EDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSAC 384
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
H GLV+EG F M +GI P I HYGC+V+LLGRAG L++AY L+ +M + D +
Sbjct: 385 GHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVL 444
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
W TLLG CR+H ++ LGE + + L++ K SG YVLL N+Y++ G+WE V ++R M E
Sbjct: 445 WGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKE 504
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHN 424
G++ GCS+I + VHEFV + HP+ EIY ML+EIN LK GY + LH+
Sbjct: 505 HGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHD 564
Query: 425 LGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVI 484
L E+K +L HSEKLAIAFG+++T PGTT+++ KNLR+C DCH K++S + R+++
Sbjct: 565 LREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIV 624
Query: 485 IRDRLRFHHFREGRCSCNDYW 505
+RDR RFHHF +G CSC DYW
Sbjct: 625 MRDRNRFHHFEDGLCSCGDYW 645
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S P E LF +M + N + C + +L G IH+ + G
Sbjct: 244 MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKG 303
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q++ + T L+D+YS +A +FD I +D VAWN +I Y + ++ AL LF+
Sbjct: 304 IQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFE 363
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E+G KP D+T + +L AC H G +E G R + + +G K+ ++ +
Sbjct: 364 EMT--ETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLG 421
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G L A+ + K M D V W ++
Sbjct: 422 RAGHLEEAYGLVKNMTIAADPVLWGTLL 449
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 41/343 (11%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQIHA +LR G + L L Y+ + + +F+ + + +++ +I ++++
Sbjct: 64 LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ A + + G +P+ T VL++C +LE G+ +H + G GS +
Sbjct: 124 RLFDRAFGYYSQM--LSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLY 177
Query: 170 LCNSLIAM-------------------------------YSKCGSLGMAFEVFKGMPEKD 198
+ L+ + YSK G L A +F+GM E+D
Sbjct: 178 VRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERD 237
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VV W+ MI G A +G ++++ F M A P++ T VLSAC G ++ G ++
Sbjct: 238 VVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESG-RWIH 296
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ GI N+H ++D+ + G L+ A +L+ D W +++ +H
Sbjct: 297 SYIENKGIQINVHVGTALIDMYSKCGSLEDA-RLVFDRIRDKDVVAWNSMIVGYAMHGFS 355
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
++ E + E + + + + + S+ G V+E R F
Sbjct: 356 QHALQLFEEMTETGHKPTD--ITFIGILSACGHGGLVEEGRSF 396
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 313/505 (61%), Gaps = 8/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS + + L R+ P N F S ++ C +L Q+H +++ G
Sbjct: 127 MISAYSNKLNDKALKCLILMFREGVRP-NMFTYSSVLRACDGLPNLR---QLHCGIIKTG 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+YS + A +FDE+P RD V WN +I + +N +AL LF
Sbjct: 183 LESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFK 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G D T VL+AC L LE G ++H ++ + + + L N+LI MY K
Sbjct: 243 RMKR--AGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCK 298
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A F M EKDV+SWS M++GLA NG+ R A+E F +M+ +G P+ T GV
Sbjct: 299 CGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGV 358
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV++G + M K FG+ P HYGC++DLLGRAG LD+A +LI M +P
Sbjct: 359 LFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEP 418
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS WRTLLGACR+H++V L + +IEL+ +++G Y+LL N+Y++ WE V E+R+
Sbjct: 419 DSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRK 478
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ TPGCS I + +H F++ D SHP+I EI Q L+++ +++ GYV +
Sbjct: 479 TMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNF 538
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L E+K ++L YHSEKLAI FG++ T+R+ KNLRIC DCH FAKV+S + +
Sbjct: 539 VLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEH 598
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++IRD +R+HHF++G CSC DYW
Sbjct: 599 RSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 12/295 (4%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
+ M + + + S IKCC ++ G ++H + GY+ ++ TL+++Y
Sbjct: 43 MDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVK 102
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
F EA LFDE+P+R+ V+W +IS Y N+ AL + RE G +P+ T
Sbjct: 103 FNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFRE--GVRPNMFTYS 159
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
VL+AC L L ++H I + G S + + ++LI +YSK L A VF MP +
Sbjct: 160 SVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR 216
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG-MMF 256
D+V W+++I G A N G +A+ F M+RAG D T T VL AC+ L++ G +
Sbjct: 217 DLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH 276
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ + D ++ N ++D+ + G L+ A + M V+ D W T++
Sbjct: 277 VHVLKFDQDLILN----NALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAG 326
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 187 AFEVFKGM--PEKDVVSWSAMISGLAMNGHGRD---AIESFGAMQRAGVFPDDQTFTGVL 241
A KGM P + V S +++ A H D A+ + AM+R GVF D T++ ++
Sbjct: 3 AISKLKGMKPPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELI 62
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
CS G V EG + + G P + ++++ + LL++A L M P+
Sbjct: 63 KCCSARGAVQEGKRVHEHIFCK-GYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM---PE 118
Query: 302 STI--WRTLLGA 311
+ W T++ A
Sbjct: 119 RNVVSWTTMISA 130
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/439 (44%), Positives = 291/439 (66%), Gaps = 3/439 (0%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+T ++ Y+ +A +LFD +P++D + WN +I Y ++ + +AL LF + R S
Sbjct: 188 VTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR--S 245
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+PD+VT +LVL A A LG +E G+ +H Y+ + + + +L+ MY KCGSL
Sbjct: 246 SAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLED 305
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF G+ KD+V W+AMI+G AM+G R A+E F ++ G++P D TF G+L+ACSH
Sbjct: 306 AVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSH 365
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
GLV+EG F M ++GI P I HYGC+VDLLGRAGL+++A+ L+ S+ + PD+ +W
Sbjct: 366 SGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWV 425
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
+LL ACR+HK++ LG+R+ + L+ SG Y+LL N+Y++VG WE+V +R M G
Sbjct: 426 SLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASG 485
Query: 367 LQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLG 426
+Q PGCS I + V+EFV D+SHP +EIY MLD++N +K G+V + LH+L
Sbjct: 486 IQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLD 545
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
K AL+ HSEKLA+AFG++++ PG+TI++ KNLR C DCH K++S + +R+++ R
Sbjct: 546 EATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFR 605
Query: 487 DRLRFHHFREGRCSCNDYW 505
DR RFHHF +G C+C DYW
Sbjct: 606 DRNRFHHFVDGSCTCGDYW 624
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/472 (43%), Positives = 303/472 (64%), Gaps = 5/472 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QR 94
I+ C + +L G +HA ++G+ + +L+ LY A K+FDE+P R
Sbjct: 123 IQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGR 182
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+ V+WN +++ + N R + L +F + + PD T + VL ACA GAL G +
Sbjct: 183 NLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFA--PDGFTIVSVLTACAEFGALALGRR 240
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+H Y+ + G ++ N+LI +Y+KCGS+ A +F+ M + VVSW+++I GLA NG
Sbjct: 241 VHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANG 300
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
G++A+E F M+R + P + T GVL ACSHCGLVD+G + DRM +D+GI P I H
Sbjct: 301 FGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHL 360
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
GC+VDLLGRAG +++AY I +M ++P++ +WRTLLG+C +HK + LG+ E L+EL
Sbjct: 361 GCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDP 420
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
SGDYVLL NLY++VG W V LR+ M + ++ PG S + L+ V+EFV+ D SHP
Sbjct: 421 GHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHP 480
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
+IY+ML EI ++L+ GY+ ++ L ++ EEK AL+YHSE+LAIAF +L + PG
Sbjct: 481 ESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPG 540
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IR+ KNLR+C DCH ++S VY+RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 541 IPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 592
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 14/285 (4%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS----FEACKLF 88
C ++ + SL QIHAR LR G L+ + + ++ + L
Sbjct: 15 CVALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLS 74
Query: 89 DEIPQ--RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+P D N ++ + R R AL L+R PD T ++QACA L
Sbjct: 75 RLLPHGPLDPFPLNTVLRIAAGSPRPRVAL----ELHRRRLAL-PDTHTYPPLIQACARL 129
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSA 204
AL GE +H +++G+ + + + NSL+ +Y CG A +VF MP +++VSW++
Sbjct: 130 LALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNS 189
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
M++ A NG + + F M PD T VL+AC+ G + G + K
Sbjct: 190 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEK-V 248
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G++ N H ++DL + G ++ A ++ MG+ W +L+
Sbjct: 249 GLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 293
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +++ + P E +F +M + F + C +F +L G ++H V + G
Sbjct: 190 MLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVG 249
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
+S + L+DLY+ +A ++F+E+ R V+W LI N ++AL LF
Sbjct: 250 LVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELF 309
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMY 178
+ RE+ P ++T + VL AC+H G ++ G + R ++G ++ ++ +
Sbjct: 310 SLMEREK--LVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLL 367
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMN 212
+ G + A++ MP E + V W ++ AM+
Sbjct: 368 GRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 402
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/536 (40%), Positives = 306/536 (57%), Gaps = 31/536 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R S S P+ L+ +M P N + F +K C + QIHA + + G
Sbjct: 81 MIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFG 140
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + +L++ Y+ A LFD I + D V+WN +I Y++ AL LF
Sbjct: 141 YGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFR 200
Query: 121 NL---------------------NRE---------ESGCKPDDVTCLLVLQACAHLGALE 150
+ N+E S PD+V+ L AC+ LGALE
Sbjct: 201 KMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALE 260
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G+ IH Y ++ LC LI MY+KCG + A VFK M K V W+A+ISG A
Sbjct: 261 QGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYA 320
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+G GR+AI F MQ GV P+ TFT VL+ACS+ GLV+EG + + +D+ + P I
Sbjct: 321 YHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTI 380
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HYGC+VDLLGRAGLL++A + I M +KP++ IW +LL AC+IHK++ LGE++ E LIE
Sbjct: 381 EHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIE 440
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
+ + G YV + N+++ W+K E R M E+G+ PGCS I L+G HEF+ D
Sbjct: 441 MDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDR 500
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY-HSEKLAIAFGVLA 449
SH I EI + ++L+ GYV E+ L +L +E+ A+ + HSEKLAI +G++
Sbjct: 501 SHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMK 560
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PGTTIR+ KNLR+C DCH ++S +Y R++++RDR RFHHF++G+CSC DYW
Sbjct: 561 TKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 48/341 (14%)
Query: 31 FACSFAIK---CCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
F SFA + C++ C L QIHAR+L+ G D MT + + S A
Sbjct: 5 FCSSFAFEHNLSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHD 64
Query: 87 L-FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV-TCLLVLQACA 144
+ F+ + DT WN++I + + +L L+ +R P + T +L+AC+
Sbjct: 65 VFFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLY---HRMLCCSAPHNAYTFPFLLKACS 121
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS------------------------- 179
+L A + +IH +I++ GYG + NSLI Y+
Sbjct: 122 NLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNS 181
Query: 180 ------KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
K G + MA +F+ MPEK + +SW+ MISG G ++A++ F MQ + V P
Sbjct: 182 VIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPP 241
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV-VDLLGRAGLLDQAYQ 291
D+ + LSACS G +++G +K + ++ CV +D+ + G +++A
Sbjct: 242 DNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSV--LCCVLIDMYAKCGEMEEALG 299
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ +M K +W L+ H LG I +E++
Sbjct: 300 VFKNMKTK-SVQVWTALISGYAYH---GLGREAISKFLEMQ 336
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 310/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S E+ + +M + + F S + ++ ++ G +IH V+R G
Sbjct: 177 VIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG 236
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + ++L+D+Y+ + ++ ++F + +RD+++WN L++ Y++N R +AL LF
Sbjct: 237 IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +P V V+ ACAHL L G+++H Y+ G+G + + ++L+ MYSK
Sbjct: 297 QM--VSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSK 354
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A ++F M D VSW+A+I G A++GHG +A+ F M+R GV P+ F V
Sbjct: 355 CGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLVDE + + M+K +G+ + HY V DLLGRAG L++AY I+ M V+P
Sbjct: 415 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEP 474
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W TLL +C +HK++ L E+V E + + ++ G YVL+ N+Y+S G W+++ +LR
Sbjct: 475 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRL 534
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ +KGL+ P CS I +K H FV D SHP ++ I + L + +Q++ GYVA+ +
Sbjct: 535 RVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSG 594
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K L HSE+LA+AFG++ T PGTTIRV KN+RIC DCH K +S +
Sbjct: 595 VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITE 654
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 655 REIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 191/446 (42%), Gaps = 28/446 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R ++ S F +MR R P + S +K C L G +H ++R
Sbjct: 76 VIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPS-VLKSCTMMMDLRFGESVHGFIVRL 134
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D LM++YS K+F+ +P++D V++N +I+ Y ++ DAL +
Sbjct: 135 GMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMV 194
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ S KPD T VL + + G++IH Y+ G S + + +SL+ MY+
Sbjct: 195 REMG--TSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYA 252
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K + + VF + +D +SW+++++G NG +A+ F M A V P F+
Sbjct: 253 KSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSS 312
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V+ AC+H + G + + G NI +VD+ + G + A ++ M +
Sbjct: 313 VIPACAHLATLHLGKQLHGYVLRG-GFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVG----D 351
D W ++ +H H G + E+K Q +V +L S VG
Sbjct: 372 -DEVSWTAIIMGHALHGH---GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 427
Query: 352 WEKVKELREF--MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD------ 403
W + + +N++ +G G + E D +S R+ +
Sbjct: 428 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE-AYDFISKMRVEPTGSVWSTLLSSC 486
Query: 404 EINKQLKIAGYVAE--ITSELHNLGA 427
++K L++A VAE T + N+GA
Sbjct: 487 SVHKNLELAEKVAEKIFTIDSENMGA 512
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
IK + S Q+HA+ +R L + ++ +Y+ + EA +F +
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPV 70
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+AW +I C+ AL F + SG PD VL++C + L FGE +H
Sbjct: 71 LAWKSVIRCFTDQSLFSRALASF--VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+I G + N+L+ MYSK + +VF+ MP KDVVS++ +I+G A +G
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYE 188
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
DA+ M + + PD T + VL S V +G + + GI +++ +
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK-GIDSDVYIGSSL 247
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
VD+ ++ ++ + ++ + + + DS W +L+
Sbjct: 248 VDMYAKSARIEDSERVFSHL-YRRDSISWNSLVA 280
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 310/505 (61%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S E+ + +M + + F S + ++ ++ G +IH V+R G
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + ++L+D+Y+ + ++ ++F + RD ++WN L++ Y++N R +AL LF
Sbjct: 273 IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFR 332
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KP V V+ ACAHL L G+++H Y+ G+GS + + ++L+ MYSK
Sbjct: 333 QM--VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A ++F M D VSW+A+I G A++GHG +A+ F M+R GV P+ F V
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLVDE + + M+K +G+ + HY V DLLGRAG L++AY I+ M V+P
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W TLL +C +HK++ L E+V E + + ++ G YVL+ N+Y+S G W+++ +LR
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL+ P CS I +K H FV D SHP +++I + L + +Q++ GYVA+ +
Sbjct: 571 RMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSG 630
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K L HSE+LA+AFG++ T PGTTIRV KN+RIC DCH K +S +
Sbjct: 631 VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITE 690
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 691 REIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 41/297 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA+ +R L + ++ +Y+ + EA LF + +AW +I C+
Sbjct: 26 QLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
AL F + SG PD VL++C + L FGE +H +I G +
Sbjct: 85 LFSKALASF--VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 171 CNSLIAMYSKCGSLG------------------------------MAF------EVFKGM 194
N+L+ MY+K +G M F VF+ M
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
P KDVVS++ +I+G A +G DA+ M + PD T + VL S V +G
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ + GI +++ +VD+ ++ ++ + ++ + + + D W +L+
Sbjct: 263 EIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAG 317
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 319/537 (59%), Gaps = 34/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R +S + P + F + +M + RI + F IK + ++ G Q H++++R G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 61 YQLDSQLMTTLMDLY------------------------STFEKSFEAC-------KLFD 89
+Q D + +L+ +Y ++ + C ++FD
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
E+P R+ W+++I+ Y +N A+ LF+ + RE G ++ + V+ +CAHLGAL
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE--GVVANETVMVSVISSCAHLGAL 265
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
EFGE+ + Y+ + + L +L+ M+ +CG + A VF+G+PE D +SWS++I GL
Sbjct: 266 EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGL 325
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++GH A+ F M G P D TFT VLSACSH GLV++G+ + M KD GI P
Sbjct: 326 AVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPR 385
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VD+LGRAG L +A I M VKP++ I LLGAC+I+K+ + ERV LI
Sbjct: 386 LEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLI 445
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV-D 388
++K + SG YVLL N+Y+ G W+K++ LR+ M EK ++ PG S I + G +++F + D
Sbjct: 446 KVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
D HP + +I + +EI ++++ GY ++ EEK +++ HSEKLAIA+G++
Sbjct: 506 DQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMM 565
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PGTTIR+ KNLR+C DCH K++S VY RE+I+RDR RFHHFR G CSC DYW
Sbjct: 566 KTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 43/330 (13%)
Query: 41 MKFCSLMGGLQI-HARVLRDGYQLDSQLMTTLMDL---YSTFEKSFE----ACKLFDEIP 92
++ CS L+I H +LR D + + L+ L STF K A +F +I
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+ +N+LI C+ A + + + S PD++T +++A + + + G
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK--SRIWPDNITFPFLIKASSEMECVLVG 136
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG---- 208
E+ H I G+ + + + NSL+ MY+ CG + A +F M +DVVSW++M++G
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 209 ----------------------LAMNGHGRD-----AIESFGAMQRAGVFPDDQTFTGVL 241
+ +NG+ ++ AI+ F M+R GV ++ V+
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
S+C+H G ++ G + + K + N+ +VD+ R G +++A + + + D
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETD 314
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIEL 331
S W +++ +H H +I L
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM------YSKCGSL-GMAFE 189
L +LQ+C+ L+ IH ++ S + + + L+A+ ++K +L G A+
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F + ++ ++ +I + A + M ++ ++PD+ TF ++ A S
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V G ++ + FG +++ +V + G + A ++ MG + D W +++
Sbjct: 133 VLVGEQTHSQIVR-FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR-DVVSWTSMV 190
Query: 310 -GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
G C+ + E E E+ + + +++N Y+ +EK +L EFM +G+
Sbjct: 191 AGYCK----CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/505 (41%), Positives = 311/505 (61%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + P E +F +MRQ+ + + A ++ L G IH V++ G
Sbjct: 241 MISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMG 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +L +Y+ + A FD++ + + WN +IS Y +N T +A+ LF
Sbjct: 301 LEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQ 360
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + D +T + ACA +G+L+ + + YI++ Y + + + +LI M++K
Sbjct: 361 EMISKN--IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAK 418
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A EVF +KDVV WSAMI G ++G G+DAI+ F AM++AGV P+D TF G+
Sbjct: 419 CGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGL 478
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+AC+H GLV+EG M K +GI HY CVVDLLGR+G L++AY IT+M ++P
Sbjct: 479 LTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEP 537
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W LLGAC+I++HVTLGE E L L +G YV L NLY+S W+ V ++R
Sbjct: 538 GVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRI 597
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKGL G S I + G + F V D SHPR EI++ L+ + ++LK AG++ I S
Sbjct: 598 LMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIES 657
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EEK L HSE+LAIA+G+++T PGTT+R+ KNLR C++CH+ K++S + N
Sbjct: 658 VLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVN 717
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC DYW
Sbjct: 718 REIVVRDANRFHHFKNGVCSCRDYW 742
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHA+++ G L+T ++ + A K+FDE P+ WN +I Y +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
DA+ ++ + + SG PD T VL+AC+ + LE G+++H I G+ S + +
Sbjct: 149 FFGDAIEMYSRM--QASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N L+A+Y+KCG + A VF+G+ ++++VSW++MISG NG +A+ FG M++ V
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266
Query: 231 FPDDQTFTGVLSACS-----------------------------------HCGLVDEGMM 255
PD VL A + CG V
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGAC 312
F D+M +PN+ + ++ + G ++A +Q + S ++ DS R+ + AC
Sbjct: 327 FFDQME-----IPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILAC 381
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 4/315 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS + + ++ +M+ + + F +K C L G ++H ++ R G
Sbjct: 140 IIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLG 199
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+ LY+ + +A +F+ + R+ V+W +IS Y +N +AL +F
Sbjct: 200 FESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFG 259
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD + + VL+A + LE G+ IH + + G + +L SL AMY+K
Sbjct: 260 QM--RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAK 317
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A F M +V+ W+AMISG A NG+ +A+ F M + D T
Sbjct: 318 CGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSA 377
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ G +D D ++K ++ ++D+ + G +D A ++ +
Sbjct: 378 ILACAQVGSLDLAKWMGDYINKT-EYRNDVFVNTALIDMFAKCGSVDLAREVFDRT-LDK 435
Query: 301 DSTIWRTLLGACRIH 315
D +W ++ +H
Sbjct: 436 DVVVWSAMIVGYGLH 450
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 301/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + LF++M+ + + + +A + + C +L G +H + +
Sbjct: 425 MITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENN 484
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +S + L D+Y+ +A +F + ++D ++WN +I Y +N +AL LF
Sbjct: 485 LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFA 544
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE KPD T +L ACA L AL+ G +IH Y +GY + N+++ MY K
Sbjct: 545 EMQRES---KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVK 601
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L +A +F +P KD+VSW+ MI+G M+G+G +AI +F M+ G+ PD+ +F +
Sbjct: 602 CGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISI 661
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+DEG + M K+ I PN+ HY C+VDLL R G L +A++ I +M +KP
Sbjct: 662 LYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKP 721
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V E + EL+ + +G YVLL N+Y+ WE+V++LR+
Sbjct: 722 DATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRK 781
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ ++GL+ PGCS I +KG ++ FV D S P+ +I +L + ++K GY +
Sbjct: 782 KIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAY 841
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N EK AL HSEKLA+AFG+L PPG TIRV KNLR+C DCH AK +S +
Sbjct: 842 ALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSAS 901
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC YW
Sbjct: 902 REIILRDSSRFHHFKDGSCSCRGYW 926
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 5/312 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS S + E LF++M + I N + S +KC + G Q+H + + G
Sbjct: 222 MISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLG 281
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ +L+ Y K A KLFDE+ RD ++WN +IS Y++N + +F
Sbjct: 282 FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIF- 340
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYS 179
+ G D T + V ACA++G L G+ +H Y I ++ N+L+ MYS
Sbjct: 341 -IKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYS 399
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A VF+ M EK VVSW++MI+G G AI+ F M+ GV PD T
Sbjct: 400 KCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTS 459
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L+AC+ G + G + D + ++ + N + D+ + G + A+ + + M K
Sbjct: 460 ILNACAINGNLKSGKIVHDYIREN-NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-K 517
Query: 300 PDSTIWRTLLGA 311
D W T++G
Sbjct: 518 KDVISWNTMIGG 529
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 159/374 (42%), Gaps = 50/374 (13%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
CS ++ C + S+ G ++ + + G +D L L+ +Y E +FD++
Sbjct: 154 CSI-LQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+ WN++IS Y + +++ LF + E G KP+ T +L+ A + +E G
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQM--LELGIKPNSYTFSSILKCFAAVARVEEG 270
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
++H I + G+ S + NSLI+ Y + A ++F + ++DV+SW++MISG N
Sbjct: 271 RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKN 330
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC---------------------------- 244
G IE F M GV D T V AC
Sbjct: 331 GLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRF 390
Query: 245 --------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
S CG ++ + +RM + + + ++ R GL D A +L M
Sbjct: 391 NNTLLDMYSKCGDLNSAIRVFERMDE-----KTVVSWTSMITGYVREGLSDGAIKLFDEM 445
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGD 351
GV PD ++L AC I+ ++ G +++ I E+ +V L ++Y+ G
Sbjct: 446 KSRGVVPDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGS 504
Query: 352 WEKVKELREFMNEK 365
+ ++ M +K
Sbjct: 505 MKDAHDVFSHMKKK 518
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/503 (40%), Positives = 314/503 (62%), Gaps = 4/503 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + + +E LF++M + + + + C + S+ G Q+H+ + G
Sbjct: 206 LISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHG 265
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLY + A LF+ + +D ++WN LI Y ++AL LF
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 325
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P++VT L +L ACAHLGA++ G IH YI + G + +L SLI MY
Sbjct: 326 EMLR--SGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMY 383
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF M + + SW+AMI G AM+G A + F M++ G+ PDD TF
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFV 443
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M++D+ I P + HYGC++DLLG +GL +A ++I SM +
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEM 503
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
PD IW +LL AC++H +V LGE ++LI+++ + SG YVLL N+Y++ G W +V +
Sbjct: 504 DPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKR 563
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDT 623
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K++S +
Sbjct: 624 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683
Query: 479 YNREVIIRDRLRFHHFREGRCSC 501
Y RE+I RDR RFHHF +G CSC
Sbjct: 684 YKREIIARDRTRFHHFXDGVCSC 706
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 183/398 (45%), Gaps = 72/398 (18%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P YL+ M + N + F +K C K + G QIH VL+ G
Sbjct: 74 MFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLG 133
Query: 61 YQLDSQLMTTLMDLY----------STFEKS---------------------FEACKLFD 89
LD + T+L+ +Y F++S A K+FD
Sbjct: 134 CDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFD 193
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN LIS Y ++AL LF + + + KPD+ T + VL ACA ++
Sbjct: 194 EIPVKDVVSWNALISGYAETGNYKEALELFKEMMK--TNVKPDESTMVTVLSACAQSASI 251
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N+LI +Y KCG + A +F+G+ KDV+SW+ +I G
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGY 311
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P++ T +L AC+H G +D G +++D+ K G+
Sbjct: 312 THMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLK--GV 369
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSM------------------------------ 296
++D+ + G ++ A Q+ SM
Sbjct: 370 SNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSR 429
Query: 297 ----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
G++PD + LL AC + LG + + E
Sbjct: 430 MRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 169/375 (45%), Gaps = 56/375 (14%)
Query: 44 CSLMGGLQI-HARVLRDGYQLDSQLMTTLMDLYSTFEKSFE----ACKLFDEIPQRDTVA 98
C + L+I HA++++ G + ++ L++ +S F+ A +FD I + + +
Sbjct: 12 CKTLQSLRIIHAKMIKTGLHNTNYALSKLIE-FSVLSPHFDGLTYAISVFDSIQEPNLLI 70
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
WN + + + AL L+ + G P+ T +L+ACA A G++IH +
Sbjct: 71 WNTMFRGHALSSDPVSALYLY--VCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGH 128
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF---------------KG---------- 193
+ + G + + SLIAMY K G A +VF KG
Sbjct: 129 VLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSA 188
Query: 194 ------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+P KDVVSW+A+ISG A G+ ++A+E F M + V PD+ T VLSAC+
Sbjct: 189 QKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQS 248
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
++ G + D G N+ ++DL + G ++ A L + K D W T
Sbjct: 249 ASIELGRQVHSWID-DHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-DVISWNT 306
Query: 308 LLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--------VGDWEKV--- 355
L+G + H+ L + + E L++ ES + V +L++ + +G W V
Sbjct: 307 LIGG---YTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYID 363
Query: 356 KELREFMNEKGLQTT 370
K L+ N L+T+
Sbjct: 364 KRLKGVSNPSSLRTS 378
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/536 (40%), Positives = 304/536 (56%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + EE LF++M I + + C + ++ G +H V++ G
Sbjct: 260 LISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVG 319
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLF-------------------------------D 89
+ L L+ +YS+ E+ A KLF D
Sbjct: 320 IETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFD 379
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P +D V+W+ +IS Y + R + L LF + E G KPD+ + V+ AC HL AL
Sbjct: 380 SMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIE--GTKPDETILVSVISACTHLAAL 437
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G+ IH YI ++G + L +LI MY K G + A EVFKG+ EK V +W+A+I GL
Sbjct: 438 DQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGL 497
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AMNG ++++F M+ GV P++ TF VL AC H GLVDEG + M ++ I PN
Sbjct: 498 AMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPN 557
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLLGRAG+L +A +LI SM + PD + W LLGAC+ + GER+ L+
Sbjct: 558 IKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLV 617
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL G VLL N+Y+S G+W V E+R M + G+ TPGCS I G VHEF+ D
Sbjct: 618 ELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGD 677
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
+HP+ I MLDE+ K+LK+ GY + ++ EEK L HSEKLAIAFG++A
Sbjct: 678 KTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIA 737
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
P T IR+ KNLRIC DCH AK++S +NRE+++RDR RFHHF++G CSC DYW
Sbjct: 738 IDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y +SP + ++++ M + + + + + C + G I VL+ G
Sbjct: 97 MMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVG 156
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + TL+++Y+ +A K+FD D V+WN +++ Y+
Sbjct: 157 FDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVL------------ 204
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+G +E + ++ + E + NS+I ++ K
Sbjct: 205 -------------------------VGNVEEAKDVYDRMPERNVIAS----NSMIVLFGK 235
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G++ A ++F M +KD+VSWSA+IS N +A+ F M G+ D+ V
Sbjct: 236 KGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSV 295
Query: 241 LSACSHCGLVDEGMM 255
LSACS +V G +
Sbjct: 296 LSACSRLLVVITGKL 310
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 123/267 (46%), Gaps = 16/267 (5%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYS--TFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
QI ++++ G+ DS + L+ + F ++ ++F I + N ++ Y++
Sbjct: 44 QILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQ 103
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
A+ ++ + ES D+ T ++ Q+C+ A G+ I ++ + G+ S +
Sbjct: 104 RNSPCKAIWVYKFM--LESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDV 161
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+LI MY+ CG+L A +VF G D+VSW++M++G + G+ +A + + M
Sbjct: 162 YIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPER 221
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
V + ++ G V+E + M + ++ + ++ + + ++
Sbjct: 222 NVIASN----SMIVLFGKKGNVEEACKLFNEMKQK-----DLVSWSALISCYEQNEMYEE 272
Query: 289 AYQLITSM---GVKPDSTIWRTLLGAC 312
A L M G+ D + ++L AC
Sbjct: 273 ALILFKEMNANGIMVDEVVVLSVLSAC 299
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/457 (44%), Positives = 294/457 (64%), Gaps = 3/457 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTVAWNVLISCYIR 108
+HA V++ G D+ ++ T++D Y+ + A K+FD + ++D V+WN +I+ Y +
Sbjct: 214 SLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQ 272
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + DAL L+ + K + VT +L ACAH G ++ G+ IH + G +
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV 332
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ S++ MYSKCG + MA + F+ + EK+++SWSAMI+G M+GHG++A++ F M R+
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRS 392
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G P+ TF VL+ACSH GL+D+G + + M K FGI P + HYGC+VDLLGRAG LD+
Sbjct: 393 GQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDE 452
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
AY LI M VKPD+ IW LL ACRIHK+V L E + L EL A G YVLL N+Y+
Sbjct: 453 AYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAE 512
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
G W+ V+ +R + +G++ PG S++ LKG H F V D SHP+ EIY L ++ ++
Sbjct: 513 AGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEK 572
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
++ AGYV S LH+L EEK +AL HSEKLAIAF ++ + PG+ I V KNLR+C DC
Sbjct: 573 MQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDC 632
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K+++ + RE+I+RD RFHHF++G CSC DYW
Sbjct: 633 HTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 155/337 (45%), Gaps = 14/337 (4%)
Query: 49 GLQIHARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G Q+H +R G + D + L+ +Y+ + +A K FDEIP + V + S Y+
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
RN +L LF L S D+ L+ A A + +H + + G
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 168 MNLCNSLIAMYSKCG--SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ N+++ Y+K G LG A +VF M EKDVVSW++MI+ A NG DA+ + M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 226 QR--AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
+ + T + +L AC+H G + G +++ + G+ N++ VVD+ +
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR-MGLEENVYVGTSVVDMYSKC 345
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLL 342
G ++ A + + K + W ++ +H H G+ ++ E+ ++ ++ +Y+
Sbjct: 346 GRVEMARKAFQKIKEK-NILSWSAMITGYGMHGH---GQEALDIFNEMCRSGQNPNYITF 401
Query: 343 LNLYSSVGDWEKVKELREFMN--EKGLQTTPGCSTIG 377
+++ ++ + + R + N +K PG G
Sbjct: 402 ISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYG 438
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + + L+ KM I N S + C ++ G IH +V+R
Sbjct: 266 MIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR 325
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + + T+++D+YS + A K F +I +++ ++W+ +I+ Y + ++AL +
Sbjct: 326 MGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDI 385
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAM 177
F+ + R SG P+ +T + VL AC+H G L+ G + + + G + ++ +
Sbjct: 386 FNEMCR--SGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDL 443
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+ + K M K D W A++S
Sbjct: 444 LGRAGCLDEAYGLIKEMKVKPDAAIWGALLSA 475
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 304/494 (61%), Gaps = 4/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF+ M + + + + + CC+ + +H +++ G++ + L
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCCV--VGSINPKSVHGLIIKTGFENYKLVSNAL 405
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ A +F+++ ++D ++W L++ Y +N ++L +F ++ +G P
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDM--RVTGVNP 463
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +L ACA L LEFG+++H + G ++ NSL+AMY+KCG L A +F
Sbjct: 464 DQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIF 523
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M KDV++W+A+I G A NG GR++++ + AM +G PD TF G+L ACSH GLVD
Sbjct: 524 VSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVD 583
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + +M+K +GI P HY C++DL GR+G LD+A QL+ M VKPD+T+W++LL A
Sbjct: 584 EGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H+++ L ER +L EL+ + YV+L N+YS+ W V ++R+ M KG+ P
Sbjct: 644 CRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEP 703
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS + + V+ F+ DD HPR EIY +DEI ++K AGYV +++ LH++ E K
Sbjct: 704 GCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKE 763
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L+YHSEKLA+AFG+LA PP IR+ KNLR+C DCH+ K +S V+ R +I+RD F
Sbjct: 764 VGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCF 823
Query: 492 HHFREGRCSCNDYW 505
HHFREG CSC DYW
Sbjct: 824 HHFREGECSCGDYW 837
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 154/301 (51%), Gaps = 12/301 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E F LF MR + + F ++ C + G IH V+++G++ + ++T L+
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204
Query: 73 DLYSTFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
D+Y+ + EA LF E +++ V W +++ Y +N A+ F ++ + G +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQ--GVE 262
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+ T +L AC+ + A FGE++H +I + G+GS + + ++L+ MY+KCG L A +
Sbjct: 263 CNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNM 322
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
+ M + DVVSW++++ G +G +A+ F M + DD TF VL+ C +
Sbjct: 323 LETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSIN 382
Query: 251 DEGM--MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
+ + + + +++ ++ N +VD+ + G +D AY + M ++ D W +L
Sbjct: 383 PKSVHGLIIKTGFENYKLVSN-----ALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSL 436
Query: 309 L 309
+
Sbjct: 437 V 437
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 33/258 (12%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD---------------------- 120
+A KLFD++PQ+D +WN +IS Y+ R +A LFD
Sbjct: 83 DARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGC 142
Query: 121 -----NLNREE--SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+L R G K T VL+ C+ LG ++ GE IH ++ ++G+ + +
Sbjct: 143 KVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTG 202
Query: 174 LIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
L+ MY+KC + A +FKG+ K+ V W+AM++G A NG G A+E F M GV
Sbjct: 203 LVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVE 262
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
+ TF +L+ACS G + K G N++ +VD+ + G L A
Sbjct: 263 CNQYTFPTILTACSSVLARCFGEQVHGFIVKS-GFGSNVYVQSALVDMYAKCGDLKNAKN 321
Query: 292 LITSMGVKPDSTIWRTLL 309
++ +M D W +L+
Sbjct: 322 MLETME-DDDVVSWNSLM 338
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/501 (41%), Positives = 311/501 (62%), Gaps = 4/501 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ +E LF +M + + + + + C ++ G QIH+ + G
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+ L+DLYS + A LF+ + +D ++WN LI Y ++AL +F
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQ 300
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ + G P+DVT L +L ACAHLGA++ G IH YI + G + +L SLI MY
Sbjct: 301 EMLK--LGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMY 358
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG++ A +VF + K + S +AMI G AM+G A + M++ G+ PDD TF
Sbjct: 359 AKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFV 418
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH GL D G M+ D+ I P + HYGC++DLLGR+GL +A +LI SM +
Sbjct: 419 GLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTM 478
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC+IHK++ LGE + + L++++ + G YVLL N+Y++ W+ V +
Sbjct: 479 EPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARV 538
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KGL+ PGCS+I + +VHEF++ D HP+ EIY+ML+EI+ L G+V++
Sbjct: 539 RTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDT 598
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + E K ALSYHSEKLAIAFG+++T PGT +R+ KNLR+C +CH K++S +
Sbjct: 599 SEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKI 658
Query: 479 YNREVIIRDRLRFHHFREGRC 499
Y RE+I RDR RFHHF++G C
Sbjct: 659 YKREIIARDRSRFHHFKDGMC 679
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 48/329 (14%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F I + + ++WN +I + + AL L+ + G P+ T + ++C
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLY--VYMISLGLSPNSYTFPFLFKSC 88
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG--------------------- 182
A A + G++IH I ++G +++ SLI+MY++ G
Sbjct: 89 AKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYT 148
Query: 183 ----------SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
++ A ++F +P KDVVSW+AMISG A G ++A+E F M + V P
Sbjct: 149 AMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKP 208
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D+ T VLS C+H G V+ G + + G N+ ++DL + G +++A+ L
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWID-NHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS---- 348
+ K D W TL+G H V + + LK E+ + V +L++ +
Sbjct: 268 FEGLQYK-DVISWNTLIGGYAYINHHKEALLVFQEM--LKLGETPNDVTMLSILPACAHL 324
Query: 349 ----VGDWEKV---KELREFMNEKGLQTT 370
+G W V K+L+ + LQT+
Sbjct: 325 GAIDIGRWIHVYIDKKLKGIITNTSLQTS 353
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A VFK + E + +SW+ MI G A++ A+ + M G+ P+ TF + +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+ EG ++ K +G+ ++H + ++ + + G+++ A+++ + + D
Sbjct: 88 CAKSKAAQEGKQIHAQILK-YGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR-DVV 145
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ ++ ++ +++ + E+ ++ + +++ Y+ +G + KE E N
Sbjct: 146 SYTAMITGYASRGNMDKAQKMFD---EIPIKDVVSWNAMISGYAEIG---RYKEALELFN 199
Query: 364 E-KGLQTTPGCSTIG 377
E + P ST+
Sbjct: 200 EMMKMDVKPDESTMA 214
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 309/509 (60%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC----MKFCSLMGGLQIHARV 56
+ RA +M +E L+ +M P++ F ++ +K C + C L G +IHA +
Sbjct: 150 LFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHI 209
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR GY+ + +MTTL+D+Y+ F A +F +P ++ V+W+ +I+C+ +N+ AL
Sbjct: 210 LRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKAL 269
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + E P+ VT + +LQACA L ALE G+ IH YI S + + N+LI
Sbjct: 270 ELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALIT 329
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY +CG + M VF M ++DVVSW+++IS M+G G+ AI+ F M GV P +
Sbjct: 330 MYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYIS 389
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+EG + + M + I P + HY C+VDLLGRA L +A +LI M
Sbjct: 390 FITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDM 449
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+P T+W +LLG+CRIH +V L ER L EL+ + +G+YVLL ++Y+ W + K
Sbjct: 450 HFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAK 509
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+ + + +GLQ PGCS I +K V+ FV D +P+I EI+ +L +++ ++K GYV
Sbjct: 510 SVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVP 569
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L++L EEK + HSEKLA+AFG++ T G TIR+ KNLR+C DCH K +S
Sbjct: 570 QTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFIS 629
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+++RD RFHHFR+G CSC DYW
Sbjct: 630 KFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 164/356 (46%), Gaps = 20/356 (5%)
Query: 29 NPFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
NP +F I C + SL GL +H ++ G+ D L T L+++Y A K
Sbjct: 75 NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA-- 144
+FDE +R WN L ++ L L+ +N G D T VL+AC
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNW--IGTPSDRFTYTYVLKACVVS 192
Query: 145 --HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+ L G++IH +I HGY + +++ +L+ +Y+K GS+ A VF MP K+ VSW
Sbjct: 193 ELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252
Query: 203 SAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FL 257
SAMI+ A N A+E F M + P+ T +L AC+ +++G + ++
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYI 312
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
R D ILP ++ ++ + GR G + ++ +M K D W +L+ +H
Sbjct: 313 LRRQLD-SILPVLN---ALITMYGRCGEVLMGQRVFDNMK-KRDVVSWNSLISIYGMHGF 367
Query: 318 VTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
++ E++I S ++ +L S G E+ K L E M K + PG
Sbjct: 368 GKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSK-YRIHPG 422
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 109 NQRTRDALCLFDNLNREES--GCKPDDV--TCLLVLQACAHLGALEFGEKIHRYISEHGY 164
N + +LC NL + C+P+ T ++ +CA +L +G +HR + + G+
Sbjct: 50 NNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGF 109
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
L LI MY + GS+ A +VF E+ + W+A+ LAM GHG++ ++ +
Sbjct: 110 DQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQ 169
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-------GILPNIHHYGCVV 277
M G D T+T VL AC +V E + R K+ G NIH ++
Sbjct: 170 MNWIGTPSDRFTYTYVLKAC----VVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLL 225
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+ + G + A + +M K + W ++
Sbjct: 226 DVYAKFGSVSYANSVFCAMPTK-NFVSWSAMIA 257
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 310/495 (62%), Gaps = 4/495 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P F MR IP + F F +K C + L L +H+ +++ G D +
Sbjct: 68 PSHSLSYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLGSDIFVQNA 124
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +Y A K+FDE+ +RD+V+W+ +I+ ++ N +AL LF+ + E+
Sbjct: 125 LICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDK-VV 183
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD+VT L V+ A +HLG LE G + +I G+G + L +LI M+S+CGS+ + V
Sbjct: 184 PDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVV 243
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F+ M ++V++W+A+I+GL ++G +A+ F +M+++GV PD TF+GVL ACSH GLV
Sbjct: 244 FEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLV 303
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
EG + + K +G+ P + HYGC+VD+LGRAGLL++AY + M +KP+S IWRTLLG
Sbjct: 304 KEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLG 363
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC H ++ L E+V + ++ + ++GD VLL N+Y + G W + +R M EK +
Sbjct: 364 ACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKE 423
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
PGCS+I + +HEFV D SHP+ +I + L I L+ GY+ + + LH++ EE+
Sbjct: 424 PGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEER 483
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
++LSYHSEKLA+AF +L+ TIR+ KNLRIC DCH+F K +S + R++IIRDR R
Sbjct: 484 EHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNR 543
Query: 491 FHHFREGRCSCNDYW 505
FHHF +G CSC+DYW
Sbjct: 544 FHHFEKGLCSCHDYW 558
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 136/271 (50%), Gaps = 17/271 (6%)
Query: 51 QIHARVLRDGYQLDS-QLMTTLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNVLISCYIR 108
++H +++ Q D L T L+ + +S + +F IP DT+A+N +I + R
Sbjct: 6 RLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSR 65
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ F + +G D+ T VL+AC+ L+ +H I ++G GS +
Sbjct: 66 FFPSHSLSYFF---SMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLGSDI 119
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-R 227
+ N+LI +Y CGSL MA +VF M E+D VSWS +I+ NG+ +A++ F MQ
Sbjct: 120 FVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEG---MMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
V PD+ T V+SA SH G ++ G F+ R+ FG+ ++ ++D+ R G
Sbjct: 180 DKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLG--FGV--SVALGTALIDMFSRCG 235
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+D++ + M V+ + W L+ IH
Sbjct: 236 SIDESIVVFEKMAVR-NVLTWTALINGLGIH 265
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/423 (44%), Positives = 288/423 (68%), Gaps = 2/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A KLFDE+ +RD ++W+ ++ YI R ++AL +F + REE+ +P VL A
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET--RPGRFILSSVLAA 303
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C+++GA++ G +H Y+ + L +L+ MY+KCG L M +EVF+ M E+++ +W
Sbjct: 304 CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTW 363
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMI GLA++G DA+E F +Q + P+ T GVL+AC+H G VD+G+ M +
Sbjct: 364 NAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMRE 423
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+G+ P + HYGC+VDLLGR+GL +A LI SM +KP++ +W LLGACRIH + L E
Sbjct: 424 FYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAE 483
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
RV + L+EL+ Q SG YVLL N+Y+ VG ++ V ++R+ M ++G++T PG S + L G V
Sbjct: 484 RVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTV 543
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
HEF + D SHP++ EIY+ L I ++L++AG+ + + L ++ EEK A++YHSEKLA
Sbjct: 544 HEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLA 603
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG++ T PG I + KNLR+C DCH+ K++S +++RE+I+RDR+R+HHF+ G CSC
Sbjct: 604 IAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCK 663
Query: 503 DYW 505
D+W
Sbjct: 664 DFW 666
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 154/383 (40%), Gaps = 76/383 (19%)
Query: 23 QKRIPTNPFACSFAIKC--CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST--F 78
+K IPT+ +K SL Q+H VLR G+ D + L+ Y+ F
Sbjct: 21 EKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHF 80
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
A K+F IP + WN++I + N + A+ + R +P+ T
Sbjct: 81 SNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFY---GRMVIDARPNKFTYPT 137
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNL---------------------------- 170
+ +AC+ A++ G +IH ++ +HG GS +++
Sbjct: 138 LFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDV 197
Query: 171 --CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-------------- 214
N++I Y KCG L A +F MP K++ SW+ MI+GLA G+
Sbjct: 198 VCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
Query: 215 ---------------GR--DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM--- 254
GR +A+E F MQR P + VL+ACS+ G +D+G
Sbjct: 258 DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVH 317
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+L R S + ++D+ + G LD +++ M + T W ++G I
Sbjct: 318 AYLKRNSIKLDAVLGT----ALLDMYAKCGRLDMGWEVFEEMKEREIFT-WNAMIGGLAI 372
Query: 315 HKHVTLGERVIEHLIELKAQESG 337
H + L E + + +G
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNG 395
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + +E +F++M+++ F S + C ++ G +HA + R+
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD+ L T L+D+Y+ + ++F+E+ +R+ WN +I + R DAL LF
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
L +E KP+ +T + VL ACAH G ++ G +I + + E +G ++ ++ +
Sbjct: 385 KL--QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLG 442
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ G A ++ MP K + W A++ ++G+
Sbjct: 443 RSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGN 478
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/505 (41%), Positives = 295/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + LF M + + + + C +L G IH V + G
Sbjct: 203 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFG 262
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD + L+D+Y + +A LFD++P+RD V W V+I Y ++L LFD
Sbjct: 263 LDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFD 322
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G PD V + V+ ACA LGA+ I YI + + L ++I M++K
Sbjct: 323 KMR--EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAK 380
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E+F M EK+V+SWSAMI+ +G GR A++ F M R+G+ P+ T +
Sbjct: 381 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSL 440
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV+EG+ F M +D+ + ++ HY CVVDLLGRAG LD+A +LI SM V+
Sbjct: 441 LYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEK 500
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LGACR HK V L E+ L+EL+ Q G Y+LL N+Y++ G WE V + R+
Sbjct: 501 DEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRD 560
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M+++ L+ PG + I + H+F V D +HPR EIY+ML + +L++ GYV +
Sbjct: 561 LMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNF 620
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K L HSEKLAIAFG++ATP T IR+ KNLR+C DCH F K++S +
Sbjct: 621 VLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITG 680
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+EG CSC DYW
Sbjct: 681 RVIIVRDANRFHHFKEGACSCGDYW 705
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 146/287 (50%), Gaps = 9/287 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P N + F I+ C +L G IH V + G LD + L+D+Y + +A
Sbjct: 28 PDN-YTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD++ +RD V W V+I Y + ++L LF+ + E G PD V + V+ ACA L
Sbjct: 87 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR--EEGVVPDKVAMVTVVFACAKL 144
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GA+ I YI + + L ++I MY+KCG + A E+F M EK+V+SWSAMI
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+ +G GR A++ F M +G+ PD T +L ACS + G + + + FG+
Sbjct: 205 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRL-IHHIVYKFGL 263
Query: 267 LPNIHHYGC--VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++ H+ C +VD+ G+ ++ A L M + D W ++G
Sbjct: 264 --DLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DLVTWTVMIGG 307
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 4/315 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LFEKMR++ + + A + C K ++ I + R
Sbjct: 102 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QLD L T ++D+Y+ A ++FD + +++ ++W+ +I+ Y + + R AL LF
Sbjct: 162 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG PD +T +L AC+ L L+ G IH + + G +C +L+ MY K
Sbjct: 222 MM--LSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 279
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + A +F MPE+D+V+W+ MI G A G+ +++ F M+ GV PD V
Sbjct: 280 CREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 339
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ G + + D + + L I ++D+ + G ++ A ++ M K
Sbjct: 340 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA-MIDMHAKCGCVESAREIFDRMEEK- 397
Query: 301 DSTIWRTLLGACRIH 315
+ W ++ A H
Sbjct: 398 NVISWSAMIAAYGYH 412
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 46/282 (16%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G +PD+ T V++AC L L+ G IH + + G +C +L+ MY KC + A
Sbjct: 25 GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA 84
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--- 244
+F M E+D+V+W+ MI G A G +++ F M+ GV PD V+ AC
Sbjct: 85 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 144
Query: 245 --------------------------------SHCGLVDEGMMFLDRMSKDFGILPNIHH 272
+ CG V+ DRM + N+
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE-----KNVIS 199
Query: 273 YGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ ++ G G +A ++++ S G+ PD +LL AC K++ +G R+I H++
Sbjct: 200 WSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMG-RLIHHIV 258
Query: 330 ELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT 369
+ +V L+++Y + E + L + M E+ L T
Sbjct: 259 YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/423 (44%), Positives = 287/423 (67%), Gaps = 2/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A KLFDE+ +RD ++W+ ++ YI R ++AL +F + REE+ +P VL A
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET--RPGRFILSSVLAA 303
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C+++GA++ G +H Y+ + L +L+ MY+KCG L M +EVF+ M E+++ +W
Sbjct: 304 CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTW 363
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMI GLA++G DA+E F +Q + P+ T GVL+AC+H G VD+G+ M +
Sbjct: 364 NAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMRE 423
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+G+ P + HYGC+VDLLGR+GL +A LI SM +KP++ +W LLGACRIH + L E
Sbjct: 424 FYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAE 483
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
RV + L+EL+ Q SG YVLL N+Y+ VG ++ V ++R+ M +G++T PG S + L G V
Sbjct: 484 RVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTV 543
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
HEF + D SHP++ EIY+ L I ++L++AG+ + + L ++ EEK A++YHSEKLA
Sbjct: 544 HEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLA 603
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG++ T PG I + KNLR+C DCH+ K++S +++RE+I+RDR+R+HHF+ G CSC
Sbjct: 604 IAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCK 663
Query: 503 DYW 505
D+W
Sbjct: 664 DFW 666
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 156/383 (40%), Gaps = 76/383 (19%)
Query: 23 QKRIPTNPFACSFAIKC--CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST--F 78
+K IPT+ +K SL Q+HA VLR G+ D + L+ Y+ F
Sbjct: 21 EKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHF 80
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
A K+F IP + WN++I + N + A+ + R +P+ T
Sbjct: 81 SNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFY---GRMVIDARPNKFTYPT 137
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS------------------- 179
+ +AC+ A++ G +IH ++ +HG GS +++ ++ I MY+
Sbjct: 138 LFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDV 197
Query: 180 -----------KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-------------- 214
KCG L A +F MP K++ SW+ MI+GLA G+
Sbjct: 198 VCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
Query: 215 ---------------GR--DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM--- 254
GR +A+E F MQR P + VL+ACS+ G +D+G
Sbjct: 258 DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVH 317
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+L R S + ++D+ + G LD +++ M + T W ++G I
Sbjct: 318 AYLKRNSIKLDAVLGT----ALLDMYAKCGRLDMGWEVFEEMKEREIFT-WNAMIGGLAI 372
Query: 315 HKHVTLGERVIEHLIELKAQESG 337
H + L E + + +G
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNG 395
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + +E +F++M+++ F S + C ++ G +HA + R+
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD+ L T L+D+Y+ + ++F+E+ +R+ WN +I + R DAL LF
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
L +E KP+ +T + VL ACAH G ++ G +I + + E +G ++ ++ +
Sbjct: 385 KL--QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLG 442
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ G A ++ MP K + W A++ ++G+
Sbjct: 443 RSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGN 478
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/505 (40%), Positives = 306/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + LF KM + I N S +K ++ QIH ++ G
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSG 415
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D ++ +L+D Y EA K+F+E D VA+ +I+ Y + +AL L+
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLY- 474
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +++ KPD C +L ACA+L A E G+++H + + G+ + NSL+ MY+K
Sbjct: 475 -LQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAK 533
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F +P + +VSWSAMI G A +GHG++A+ F M R GV P+ T V
Sbjct: 534 CGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSV 593
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H GLV+EG + ++M FGI P HY C++DLLGR+G L++A +L+ S+ +
Sbjct: 594 LCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEA 653
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGA RIHK++ LG++ + L +L+ ++SG +VLL N+Y+S G WE V ++R+
Sbjct: 654 DGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRK 713
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
FM + ++ PG S I +K V+ F+V D SH R +EIY LD++ L AGY + +
Sbjct: 714 FMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEI 773
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++HN+ EK L +HSEKLA+AFG++ATPPG IRV KNLRICVDCH F K + + +
Sbjct: 774 DIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVS 833
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 834 REIIVRDINRFHHFKDGSCSCGDYW 858
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 16/315 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + EE +F +M + N F +K C L G ++H + G
Sbjct: 53 LLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTG 112
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + TL+ +Y+ ++ +LF I +R+ V+WN L SCY++++ +A+ LF
Sbjct: 113 FESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFK 172
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R SG P++ + ++L ACA L + G KIH + + G N+L+ MYSK
Sbjct: 173 EMVR--SGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSK 230
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A VF+ + DVVSW+A+I+G ++ A+ M+ +G P+ T +
Sbjct: 231 AGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSA 290
Query: 241 LSACSHCGLVDEG------MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
L AC+ G + G ++ +D S F + +VD+ + ++D A +
Sbjct: 291 LKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG-------LVDMYSKCEMMDDARRAYD 343
Query: 295 SMGVKPDSTIWRTLL 309
SM K D W L+
Sbjct: 344 SMP-KKDIIAWNALI 357
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 138/266 (51%), Gaps = 4/266 (1%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
+++HA +++ G+ D L L+ LYS + A KL DE + D V+W+ L+S Y++N
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+AL +F+ + G K ++ T VL+AC+ L G K+H G+ S
Sbjct: 61 GFVEEALLVFNEMCL--LGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGF 118
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N+L+ MY+KCG L + +F G+ E++VVSW+A+ S + +A+ F M R+G
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG 178
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ P++ + + +L+AC+ D G M K G+ + +VD+ +AG ++ A
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLK-MGLDLDQFSANALVDMYSKAGEIEGA 237
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIH 315
+ + PD W ++ C +H
Sbjct: 238 VAVFQDIA-HPDVVSWNAIIAGCVLH 262
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 166/394 (42%), Gaps = 58/394 (14%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y S E LF++M + I N F+ S + C G +IH +L+ G LD
Sbjct: 158 YVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLD 217
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
L+D+YS + A +F +I D V+WN +I+ + + AL L D +
Sbjct: 218 QFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEM-- 275
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
+ SG +P+ T L+ACA +G E G ++H + + S + L+ MYSKC +
Sbjct: 276 KGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMM 335
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM------------------- 225
A + MP+KD+++W+A+ISG + G DA+ F M
Sbjct: 336 DDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSV 395
Query: 226 ----------------QRAGVFPDDQTFTGVLSACSHCGLVDEG-MMFLDRMSKDFGILP 268
++G++ D +L C +DE +F +R +D
Sbjct: 396 ASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWED----- 450
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ Y ++ + G ++A +L M +KPD I +LL AC G+++
Sbjct: 451 -LVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH 509
Query: 326 EHLI------ELKAQESGDYVLLLNLYSSVGDWE 353
H I ++ A S L+N+Y+ G E
Sbjct: 510 VHAIKFGFMCDIFASNS-----LVNMYAKCGSIE 538
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/507 (41%), Positives = 312/507 (61%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S SSSP + +M + + F +FA+K C + S+ L+IH V+R
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ D+ + T+L+ YS A K+FDE+P RD V+WNV+I C+ AL ++
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G D T + +L +CAH+ AL G +HR + S + + N+LI MY+
Sbjct: 197 KRMGNE--GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGSL A VF GM ++DV++W++MI G ++GHG +AI F M +GV P+ TF G
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L CSH GLV EG+ + MS F + PN+ HYGC+VDL GRAG L+ + ++I +
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 374
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +WRTLLG+C+IH+++ LGE ++ L++L+A +GDYVL+ ++YS+ D + +R
Sbjct: 375 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMR 434
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ + LQT PG S I + VH+FVVDD HP IY L E+ + +AGY E +
Sbjct: 435 KLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDS 494
Query: 420 SELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L G+A + HSEKLAIA+G++ T GTT+R+ KNLR+C DCH+F K +S
Sbjct: 495 NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKA 554
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+NRE+I+RDR+RFHHF +G CSCNDYW
Sbjct: 555 FNREIIVRDRVRFHHFADGICSCNDYW 581
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 301/508 (59%), Gaps = 10/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+R YS S +P E L+ M K I P N F F + C + SL G ++H+ +++
Sbjct: 5 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 64
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G++ D + L+ LYS F A LFDE RD V++N +I Y + ALCLF
Sbjct: 65 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 124
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMY 178
+ D+VT + VL ACA LGA + G+++ H+YI + L +++ MY
Sbjct: 125 GEMQNS------DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMY 178
Query: 179 SKCGSLGMAFEVFK--GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+KCGS+ A E+F+ G K +++MI+GLA +G G AI F + G+ PD+ T
Sbjct: 179 AKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVT 238
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F GVL AC H GL++EG + M +GI P + HYGC+VDLLGR G L++AY L+ M
Sbjct: 239 FVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKM 298
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+ +S IWR LL ACR H +V +GE + L+E++AQ YVLL N+ + WE+ +
Sbjct: 299 PFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEAR 358
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R+ M + G++ PG S I L G +H FV D SHP+ EI ML ++ +LK AGYV
Sbjct: 359 QVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVP 418
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ ++ EEK + +SYHSEKLA+AFG++ P TIR+ KNLRIC DCH K++S
Sbjct: 419 NTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVS 478
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDY 504
+Y RE+ +RD +RFHHFR G CSC D+
Sbjct: 479 EIYGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
WN +I Y R+ R+A+ L+ ++ + P++ T +L +CA L +LE G ++H +
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSM-IAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
I +HG+ S + + N+LI +YS G+L +A +F +D+VS++ MI G A A
Sbjct: 61 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ FG MQ + D+ T VLSAC+ G D G + ++ N V+D
Sbjct: 121 LCLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 176
Query: 279 LLGRAGLLDQAYQLITSMG 297
+ + G +D A ++ +G
Sbjct: 177 MYAKCGSIDSALEIFRRVG 195
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 282/442 (63%), Gaps = 2/442 (0%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D +T ++ +T ++ A +LFD +PQRD VAWN +I+ Y+ R+R+AL LFD +
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM- 325
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+G +VT + L ACA LGALE G+ +H G + L +LI MYSKCG+
Sbjct: 326 -RHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGA 384
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ A EVF M E++V +W++ +SGLAMNG GRD + F M+ GV P+ TF VL
Sbjct: 385 VAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRG 444
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CS GLVDEG D M + GI P + HYGC+VDL GRAG LD A I M ++P
Sbjct: 445 CSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEG 504
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+W LL A RIHK+V LG+ ++ L+ ++++ +VLL N+Y+ +W+ V +R M
Sbjct: 505 VWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMK 564
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
KG++ PGCS I + G VHEF V +HPR EI ML E+N++L++ GY+A L
Sbjct: 565 AKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLF 624
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ E+K +A+S HSEKLAIAFG++A P IR+ KNLR+C DCH++ K++S V+NRE+
Sbjct: 625 DIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREI 684
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RDR RFHHF++G CSC DYW
Sbjct: 685 VMRDRNRFHHFKDGACSCKDYW 706
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E LF++MR A+ C + +L G +H+ G
Sbjct: 305 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 364
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L L T L+D+YS A ++FD + +R+ W +S N RD L LF
Sbjct: 365 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 424
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +G +P+ VT ++VL+ C+ G ++ G S HG + ++ +Y
Sbjct: 425 RM--ESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYG 482
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQR-------- 227
+ G L A GMP E W A+++ ++ + G+ A++ A++
Sbjct: 483 RAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVL 542
Query: 228 -AGVFPDDQTFTGV 240
+ ++ D Q + GV
Sbjct: 543 LSNIYADSQNWKGV 556
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM---------------------------- 186
+H HG+ ++ + ++MY+ G +G
Sbjct: 224 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 283
Query: 187 ---AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A E+F GMP++D V+W+AMI+G G R+A+ F M+ AG + T L+A
Sbjct: 284 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 343
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
C+ G ++ G ++ + G+ ++ ++D+ + G + A ++ SMG
Sbjct: 344 CAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 282/442 (63%), Gaps = 2/442 (0%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D +T ++ +T ++ A +LFD +PQRD VAWN +I+ Y+ R+R+AL LFD +
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM- 325
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+G +VT + L ACA LGALE G+ +H G + L +LI MYSKCG+
Sbjct: 326 -RHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGA 384
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ A EVF M E++V +W++ +SGLAMNG GRD + F M+ GV P+ TF VL
Sbjct: 385 VAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRG 444
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CS GLVDEG D M + GI P + HYGC+VDL GRAG LD A I M ++P
Sbjct: 445 CSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEG 504
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+W LL A RIHK+V LG+ ++ L+ ++++ +VLL N+Y+ +W+ V +R M
Sbjct: 505 VWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMK 564
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
KG++ PGCS I + G VHEF V +HPR EI ML E+N++L++ GY+A L
Sbjct: 565 AKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLF 624
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ E+K +A+S HSEKLAIAFG++A P IR+ KNLR+C DCH++ K++S V+NRE+
Sbjct: 625 DIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREI 684
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RDR RFHHF++G CSC DYW
Sbjct: 685 VMRDRNRFHHFKDGACSCKDYW 706
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E LF++MR A+ C + +L G +H+ G
Sbjct: 305 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 364
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L L T L+D+YS A ++FD + +R+ W +S N RD L LF
Sbjct: 365 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 424
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +G +P+ VT ++VL+ C+ G ++ G S HG + ++ +Y
Sbjct: 425 RM--ESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYG 482
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQR-------- 227
+ G L A GMP E W A+++ ++ + G+ A++ A++
Sbjct: 483 RAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVL 542
Query: 228 -AGVFPDDQTFTGV 240
+ ++ D Q + GV
Sbjct: 543 LSNIYADSQNWKGV 556
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM---------------------------- 186
+H HG+ ++ + ++MY+ G +G
Sbjct: 224 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 283
Query: 187 ---AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A E+F GMP++D V+W+AMI+G G R+A+ F M+ AG + T L+A
Sbjct: 284 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 343
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
C+ G ++ G ++ + G+ ++ ++D+ + G + A ++ SMG
Sbjct: 344 CAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 309/509 (60%), Gaps = 6/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA+S + P F+ P + F F +KCC + G Q+HA + + G
Sbjct: 66 LLRAFSQTPLPTPPFHALSLFLSMPSPPDNFTFPFLLKCCSRSKLPPLGKQLHALLTKLG 125
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ +YS F A LFD +P RD V+W +I + + +A+ LF+
Sbjct: 126 FAPDLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFE 185
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG--SKMNLCNSLIAMY 178
+ + G + ++ T + VL+ACA GAL G K+H + E G SK N+ +L+ MY
Sbjct: 186 RM--LQCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMY 243
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K G + A +VF + +DV W+AMISGLA +G +DAI+ F M+ +GV PD++T T
Sbjct: 244 AKGGCIASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVT 303
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL+AC + GL+ EG M + + +G+ P+I H+GC+VDLL RAG L +A + +M +
Sbjct: 304 AVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPI 363
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHL--IELKAQESGDYVLLLNLYSSVGDWEKVK 356
+PD+ +WRTL+ AC++H ER+++HL +++A +SG Y+L N+Y+S G W
Sbjct: 364 EPDTVLWRTLIWACKVHGDADRAERLMKHLEIQDMRADDSGSYILASNVYASTGKWCNKA 423
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
E+RE MN+KGL PG S I + G VHEFV+ D +HP EI+ L E+ +++ GY
Sbjct: 424 EVRELMNKKGLVKPPGTSRIEVDGGVHEFVMGDYNHPEAEEIFVELAEVVDKIRKEGYDP 483
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
++ L + EEK L +HSEKLA+A+G++ G+TIR+ KNLR C DCH F K++S
Sbjct: 484 RVSEVLLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDCHEFMKLIS 543
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y R++I+RDR+RFHHF+ G CSC DYW
Sbjct: 544 KIYKRDIIVRDRIRFHHFKNGECSCKDYW 572
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/515 (41%), Positives = 297/515 (57%), Gaps = 33/515 (6%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS 81
R PT S C ++ G+Q+H RV+ G D ++ L+D+Y+
Sbjct: 137 RAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADM 196
Query: 82 FEACKLFD-------------------------------EIPQRDTVAWNVLISCYIRNQ 110
A KLFD +P+RDTV+W +I Y++
Sbjct: 197 ESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAA 256
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R R+AL +F + + S D+ T + V+ ACA LGALE GE + Y+S G +
Sbjct: 257 RFREALEMFREM--QCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFV 314
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+LI MYSKCGS+ A +VFK M +D +W+A+I GLA+NG+G +AIE F M
Sbjct: 315 GNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSE 374
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD+ TF GVL+AC+H GLVD+G F M + + I PN+ HYGC++DL GRAG + +A
Sbjct: 375 TPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEAL 434
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
I M + P+STIW TLL ACR+H + +GE V E L+++ + S Y LL N+Y+
Sbjct: 435 DAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCN 494
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
WE V+ LR + EKG++ PGCS I + G++HEFV D SHP EIY L+ I L
Sbjct: 495 RWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLN 554
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GY ++T + EEK L +HSEKLAIAF +L++ P T IR+ KNLR+C+DCHN
Sbjct: 555 NVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHN 614
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S +Y REV++RDR RFHHFR G CSC DYW
Sbjct: 615 AIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 40/343 (11%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+HA V++ G ++ + T+L+ Y+ A L E + V WN LIS + R +R
Sbjct: 65 VHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRR 124
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGSKMNL 170
+A C F ++ R +G P VT + VL AC G + G ++H + G + +
Sbjct: 125 FGEACCSFVDMAR--AGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRV 182
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG--------------- 215
N+L+ MY++C + A+++F GM + VVSW++++SGL G
Sbjct: 183 ENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDT 242
Query: 216 ----------------RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
R+A+E F MQ + V D+ T V++AC+ G ++ G
Sbjct: 243 VSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVY 302
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
MS+ GI + ++D+ + G +++A + M + D W ++ ++ +
Sbjct: 303 MSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHR-DKFTWTAIILGLAVNGY-- 358
Query: 320 LGERVIEHLIEL-KAQESGDYVLLLNLYSSVGDWEKVKELREF 361
GE IE + E+ D V + + ++ V + REF
Sbjct: 359 -GEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREF 400
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 8/245 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y ++ E +F +M+ + + F I C + +L G + + R G
Sbjct: 248 MIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 307
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D+ + L+D+YS A +F ++ RD W +I N +A+ +F
Sbjct: 308 IKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFH 367
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN--SLIAMY 178
+ PD+VT + VL AC H G ++ G + + E Y N+ + +I ++
Sbjct: 368 RMIGVSE--TPDEVTFIGVLTACTHAGLVDKGREFFLSMRE-TYNIAPNVVHYGCIIDLF 424
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+ G + A + MP + W +++ A HG I + + P++ T
Sbjct: 425 GRAGKITEALDAIDQMPMTPNSTIWGTLLA--ACRVHGNSEIGELVTERLLQMDPENSTV 482
Query: 238 TGVLS 242
+LS
Sbjct: 483 YTLLS 487
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G PD T +L+A A + +H ++ + G G ++ SL+ Y+ G A
Sbjct: 38 GAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAA 97
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH- 246
+ V W+A+ISG +A SF M RAG P T+ VLSAC
Sbjct: 98 RALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKG 157
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
G V GM R+ G+LP++ +VD+ ++ A++L M V+ W
Sbjct: 158 TGDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMESAWKLFDGMQVR-SVVSWT 215
Query: 307 TLL 309
+LL
Sbjct: 216 SLL 218
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/438 (45%), Positives = 281/438 (64%), Gaps = 2/438 (0%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+T ++ +T ++ A +LFD +PQRD VAWN +I+ Y+ R+R+AL LFD + +
Sbjct: 264 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM--RHA 321
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G +VT + L ACA LGALE G+ +H G + L +LI MYSKCG++ A
Sbjct: 322 GAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAA 381
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
EVF M E++V +W++ +SGLAMNG GRD + F M+ GV P+ TF VL CS
Sbjct: 382 MEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMA 441
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GLVDEG D M + GI P + HYGC+VDL GRAG LD A I M ++P +W
Sbjct: 442 GLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGA 501
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL A RIHK+V LG+ ++ L+ ++++ +VLL N+Y+ +W+ V +R M KG+
Sbjct: 502 LLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGV 561
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PGCS I + G VHEF V +HPR EI ML E+N++L++ GY+A L ++
Sbjct: 562 KKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEE 621
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E+K +A+S HSEKLAIAFG++A P IR+ KNLR+C DCH++ K++S V+NRE+++RD
Sbjct: 622 EDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRD 681
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF++G CSC DYW
Sbjct: 682 RNRFHHFKDGACSCKDYW 699
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E LF++MR A+ C + +L G +H+ G
Sbjct: 298 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 357
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L L T L+D+YS A ++FD + +R+ W +S N RD L LF
Sbjct: 358 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 417
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +G +P+ VT ++VL+ C+ G ++ G S HG + ++ +Y
Sbjct: 418 RM--ESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYG 475
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQR-------- 227
+ G L A GMP E W A+++ ++ + G+ A++ A++
Sbjct: 476 RAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVL 535
Query: 228 -AGVFPDDQTFTGV 240
+ ++ D Q + GV
Sbjct: 536 LSNIYADSQNWKGV 549
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM---------------------------- 186
+H HG+ ++ + ++MY+ G +G
Sbjct: 217 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 276
Query: 187 ---AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A E+F GMP++D V+W+AMI+G G R+A+ F M+ AG + T L+A
Sbjct: 277 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 336
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
C+ G ++ G ++ + G+ ++ ++D+ + G + A ++ SMG
Sbjct: 337 CAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 389
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 307/508 (60%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R YS ++P E F LF ++ + I + + +K C +L G Q+H ++ G
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ E A +FD I + V +N +I+ Y R R +AL LF
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF- 218
Query: 121 NLNREESG--CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
RE G KP+++T L VL +CA LG+L+ G+ IH+Y +H + + + +LI M+
Sbjct: 219 ---REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCGSL A +F+ M KD +WSAMI A +G ++ F M+ V PD+ TF
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFL 335
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L+ACSH G V+EG + +M FGI+P+I HYG +VDLL RAG L+ AY+ I + +
Sbjct: 336 GLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPI 395
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P +WR LL AC H ++ L E+V E + EL GDYV+L NLY+ WE V L
Sbjct: 396 SPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSL 455
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M ++ PGCS+I + VVHEF D ++++ LDE+ K+LK++GYV +
Sbjct: 456 RKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDT 515
Query: 419 TSELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ +H N+ +EK L YHSEKLAI FG+L TPPGTTIRV KNLR+C DCHN AK++S
Sbjct: 516 SMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISL 575
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ R+V++RD RFHHF +G+CSC D+W
Sbjct: 576 IFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
S+ A +F+ M E D+V +++M G + + + F + G+ PD+ TF +L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
AC+ ++EG L +S G+ N++ ++++ +D A
Sbjct: 137 KACAVAKALEEGRQ-LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/516 (40%), Positives = 311/516 (60%), Gaps = 17/516 (3%)
Query: 1 MVRAYSMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+R +S S SP + + + + + SF +K C + ++H ++
Sbjct: 469 MIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFII 528
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R GY D L T L+ Y+ A K+F+E+P RD V+WN +ISCY + +AL
Sbjct: 529 RFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALK 588
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
++D + G D T + +L +CAH+GAL G ++HR+ E + + N+LI M
Sbjct: 589 MYDQMRISNVGF--DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDM 646
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCGSL A +F MP++DV +W++MI G ++G G +AI FG+M AGV P+ TF
Sbjct: 647 YAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITF 706
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+L CSH GLV EG+ + MS +F + P I HYGC+VDL GRAG L +A ++I S
Sbjct: 707 LGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSP 766
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ D +WRTLLG+C+IH++V +GE + +L++L + +GD VLL +Y+ D + V
Sbjct: 767 SQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVAR 826
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ + +G++TTPG S I + VH FVVDD SHP EIY+ L+E+ + + GY E
Sbjct: 827 MRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAME 886
Query: 418 ITSELHNLGAEEKGN--------ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+S L A + N + SYHSEKLAIA+G+ TP GT++ + KNLR+C DCH
Sbjct: 887 ESS----LVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCH 942
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NF K +S ++RE+I+RDR+RFHHFR G CSC ++W
Sbjct: 943 NFTKFVSKAFDREIIVRDRVRFHHFRGGHCSCKEFW 978
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/472 (43%), Positives = 297/472 (62%), Gaps = 6/472 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C+ ++ G Q+HA+V G+ D+ + T L++LY + A LFD IP+ +
Sbjct: 82 LQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNI 141
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
WNVLI Y N A+ L+ + + G PD+ T VL+ACA L A+E G +IH
Sbjct: 142 FLWNVLIRGYAWNGPYEAAVQLYYQMF--DYGLVPDNFTFPFVLKACAALSAIEHGREIH 199
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD---VVSWSAMISGLAMNG 213
++ + G+ + + +LI MY+KCG +G A EVF + +D VVSW+AMI+G AM+G
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHG 259
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
H +A++ F M R PD TF GVLSACSH GL++EG MF + M +D+ I P + HY
Sbjct: 260 HATEALDLFEEMNRVAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHY 318
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
C+VDLLG +G LD+AY LI M V PDS +W LL +C+IH +V LGE +E LIEL+
Sbjct: 319 TCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEP 378
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
++G+YV+L N+Y+ G WE V +LR+ M ++ L+ + CS I +K VH F+ D SHP
Sbjct: 379 DDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHP 438
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
+EIY L+ + +K AGY S H++ +EK N + HSE+LAIAFG+++TPPG
Sbjct: 439 LSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPG 498
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T + + KNLRIC DCH K +S + RE+ +RD R+HHF++G CSC DYW
Sbjct: 499 TRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 20/252 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + E L+ +M + + F F +K C ++ G +IH V++ G
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTG 206
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD---TVAWNVLISCYIRNQRTRDALC 117
++ D + L+D+Y+ A ++FD+I RD V+WN +I+ Y + +AL
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALD 266
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIA 176
LF+ +NR KPD +T + VL AC+H G LE G I ++ + ++
Sbjct: 267 LFEEMNRV---AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVD 323
Query: 177 MYSKCGSLGMAFEVF---KGMPEKDVVSWSAMISGLAMNGH---GRDAIESFGAMQRAGV 230
+ G L A+ + K +P+ V W A+++ ++ + G A+E ++
Sbjct: 324 LLGHSGRLDEAYNLIMQMKVLPDSGV--WGALLNSCKIHANVELGEIALERLIELE---- 377
Query: 231 FPDDQTFTGVLS 242
PDD +LS
Sbjct: 378 -PDDAGNYVILS 388
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 3/244 (1%)
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
NQ A+ N + E + P +LQ+C A++ G+++H + G+G
Sbjct: 51 NQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDT 110
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ L+ +Y C SL A +F +P+ ++ W+ +I G A NG A++ + M
Sbjct: 111 VIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDY 170
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ PD+ TF VL AC+ ++ G + + + G ++ ++D+ + G +
Sbjct: 171 GLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGS 229
Query: 289 AYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLY 346
A ++ + V+ + W ++ +H H T + E + + + +V +L+
Sbjct: 230 AREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSAC 289
Query: 347 SSVG 350
S G
Sbjct: 290 SHGG 293
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/490 (41%), Positives = 305/490 (62%), Gaps = 3/490 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+ +M P + + + IK C +L G +IH+ V+ GY D + L+ LY+
Sbjct: 112 FYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYA 171
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A K+FD +PQR +AWN LIS Y +N ++++ LF + ESG +PD T
Sbjct: 172 KASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM--MESGFQPDSATI 229
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ +L +C+ LGAL+FG +H Y +G+ + L SLI MY++CG++ A EVF M E
Sbjct: 230 VSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKE 289
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
++VV+W+AMISG M+G+GR A+E F M+ G P++ TF VLSAC+H GL+D+G
Sbjct: 290 RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV 349
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK-PDSTIWRTLLGACRIH 315
M + +G++P + H C+VD+ GRAGLL+ AYQ I K P +W ++LGACR+H
Sbjct: 350 FSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 409
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
++ LG +V EH++ ++ + G YV+L N+Y+ G ++V+ +R M + L+ G ST
Sbjct: 410 RNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYST 469
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I + + F + D SHP+ N IY+ LDE+ + +GYV S +H+L EE+ AL
Sbjct: 470 IEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALR 529
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
YHSEKLA+AFG+L T G TIR+ KNLRIC DCH+ K +S + +RE+I+RD+ RFHHF+
Sbjct: 530 YHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFK 589
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 590 DGSCSCLDYW 599
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 7/283 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA ++ G L+T L+ L T A +LF +P D+ ++ L+ +
Sbjct: 45 QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFG 104
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ D + + + SG + T V++ACA L AL G++IH ++ GYGS M +
Sbjct: 105 FSIDTVLFYRRM--LFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYV 162
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+LIA+Y+K + +A +VF MP++ +++W+++ISG NG +++I F M +G
Sbjct: 163 QAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGF 222
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD T +LS+CS G +D G D + G N+ ++++ R G + +A
Sbjct: 223 QPDSATIVSLLSSCSQLGALDFGCWLHDYADGN-GFDLNVVLGTSLINMYTRCGNVSKAR 281
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
++ SM + + W ++ +H + G + +E E++A
Sbjct: 282 EVFDSMKER-NVVTWTAMISGYGMHGY---GRQAMELFTEMRA 320
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + P+E LF M + + + C + +L G +H +G
Sbjct: 197 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 256
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+ L T+L+++Y+ +A ++FD + +R+ V W +IS Y + R A+ LF
Sbjct: 257 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 316
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGY--GSKMNLCNSLIAM 177
+ G +P+++T + VL ACAH G ++ G ++ + E +G G + N+C ++ M
Sbjct: 317 EM--RAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVC--MVDM 372
Query: 178 YSKCGSLGMAFEVFKGMPEKD--VVSWSAMISGLAMN 212
+ + G L A++ K K+ W++M+ M+
Sbjct: 373 FGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 409
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 45/268 (16%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+++H +I G +L LI++ GS+ A +F +P D + +++ +
Sbjct: 44 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-------------SH---CG-----LVD 251
G D + + M +G + TFT V+ AC SH CG V
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 163
Query: 252 EGMMFLDRMSKD-------FGILP--NIHHYGCVVDLLGRAGLLDQA---YQLITSMGVK 299
++ L + D F +P I + ++ + GL ++ + L+ G +
Sbjct: 164 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 223
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVL---LLNLYSSVGDWE 353
PDS +LL +C LG + A +G + VL L+N+Y+ G+
Sbjct: 224 PDSATIVSLLSSCS-----QLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 278
Query: 354 KVKELREFMNEKGLQT-TPGCSTIGLKG 380
K +E+ + M E+ + T T S G+ G
Sbjct: 279 KAREVFDSMKERNVVTWTAMISGYGMHG 306
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/495 (41%), Positives = 309/495 (62%), Gaps = 4/495 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P + F MR IP + F F +K C + L L +H+ +++ G D +
Sbjct: 68 PSHSLFYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLDSDIFVQNA 124
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +Y A K+FDE+ +RD+V+W+ +I+ ++ N +AL LF+ + E+
Sbjct: 125 LICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDK-VV 183
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD+VT L V+ A +HLG LE G + +I G G + L +LI M+S+CGS+ + V
Sbjct: 184 PDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVV 243
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F+ M ++V++W+A+I+GL ++G +A+ F +M+++GV PD TF+GVL ACSH GLV
Sbjct: 244 FEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLV 303
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
EG + + K + + P + HYGC+VD+LGRAGLL++AY + M +KP+S IWRTLLG
Sbjct: 304 KEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLG 363
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC H ++ L E+V + ++ + ++GD VLL N+Y + G W + +R M EK +
Sbjct: 364 ACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKE 423
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
PGCS+I + +HEFV D SHP+ +I + L I L+ GY+ + + LH++ EE+
Sbjct: 424 PGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEER 483
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
++LSYHSEKLA+AF +L+ TIR+ KNLRIC DCH+F K +S + R++IIRDR R
Sbjct: 484 EHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNR 543
Query: 491 FHHFREGRCSCNDYW 505
FHHF +G CSC+DYW
Sbjct: 544 FHHFEKGLCSCHDYW 558
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 136/275 (49%), Gaps = 17/275 (6%)
Query: 51 QIHARVLRDGYQLDS-QLMTTLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNVLISCYIR 108
++H +++ Q D L T L+ + +S + +F IP DT+A+N +I +
Sbjct: 6 RLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSH-- 63
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
R + LF + +G D+ T VL+AC+ L+ +H I ++G S +
Sbjct: 64 -SRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLDSDI 119
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-R 227
+ N+LI +Y CGSL MA +VF M E+D VSWS +I+ NG+ +A++ F MQ
Sbjct: 120 FVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEG---MMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
V PD+ T V+SA SH G ++ G F+ R+ G+ ++ ++D+ R G
Sbjct: 180 DKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRL----GLGVSVALGTALIDMFSRCG 235
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
+D++ + M V+ + W L+ +H T
Sbjct: 236 SIDESIVVFEKMAVR-NVLTWTALINGLGVHGRST 269
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/478 (42%), Positives = 298/478 (62%), Gaps = 1/478 (0%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
+P A + C + +H +++ G++ D + TLMD Y+ + + ++
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRV 318
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FD + +RD ++WN +I+ Y +N + +++ +F + ++ + VT VL ACAH G
Sbjct: 319 FDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGE-INYNAVTLSAVLLACAHSG 377
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
+ G+ IH + + G S + + S+I MY KCG + MA + F M EK+V SWSAM++
Sbjct: 378 SQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVA 437
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
G M+GH ++A+E F M AGV P+ TF VL+ACSH GL++EG + MS +F +
Sbjct: 438 GYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVE 497
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + HYGC+VDLLGRAG L +A+ LI M ++PD +W LLGACR+HK+V LGE
Sbjct: 498 PGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARK 557
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L EL + G YVLL N+Y+ G WE V+ +R M GL PG S + +KG VH F+V
Sbjct: 558 LFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLV 617
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D HP+ +IY+ L++++ +L+ GYV ++TS LH++G EEK L HSEKLA+AFG+
Sbjct: 618 GDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGI 677
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ T PGTTI + KNLR+C DCH K +S + +RE+++RD RFHHFR+G CSC DYW
Sbjct: 678 MNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 9/317 (2%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S E F MR+ + N AIK C L G Q H + L G++ D +
Sbjct: 130 SGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFV 189
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+ L+D+YS + +A LFDEI R+ V+W +I+ Y++N AL LF EES
Sbjct: 190 SSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEES 249
Query: 128 GCKPDDVTC------LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
G + D C + VL AC+ + E +H ++ + G+ + + N+L+ Y+KC
Sbjct: 250 GSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKC 309
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGV 240
G LG++ VF GM E+DV+SW+++I+ A NG +++E F M + G + + T + V
Sbjct: 310 GELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 369
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H G G D++ K G+ N+ ++D+ + G ++ A + M K
Sbjct: 370 LLACAHSGSQRLGKCIHDQVIK-MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK- 427
Query: 301 DSTIWRTLLGACRIHKH 317
+ W ++ +H H
Sbjct: 428 NVKSWSAMVAGYGMHGH 444
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 163 GYGSKMNLCNSLI--AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
G+ + ++C + YS +L F K + + +V SW+++I+ LA +G +A+
Sbjct: 81 GFSKRRSICAGAVLRRRYSNNPNLTTLFN--KYVDKTNVFSWNSVIAELARSGDSVEALR 138
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
+F +M++ + P+ TF + +CS + G + + FG P++ +VD+
Sbjct: 139 AFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ-AHQQALIFGFEPDLFVSSALVDMY 197
Query: 281 GRAGLLDQAYQL 292
+ G L A L
Sbjct: 198 SKCGELRDARTL 209
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 285/423 (67%), Gaps = 2/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LF+E+ +++ ++W+ +I YI+ ++AL +F+ + REE +P VL A
Sbjct: 245 EARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREE--IRPRKFVLSSVLAA 302
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA+LGAL+ G IH Y++ + L +L+ MY+KCG L MA++VF+ M +K+V +W
Sbjct: 303 CANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTW 362
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMI GL M+G DAIE F MQ+ P+ T GVLSAC+H G+VDEG+ + M +
Sbjct: 363 NAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEE 422
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+GI P + HYGCVVDLLGRAGLL +A +++ SM ++P + +W LLGACR H V LGE
Sbjct: 423 VYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGE 482
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
RV + L+EL+ Q SG Y LL N+Y+ G W+ V +R+ M E+G++T+ G S I GVV
Sbjct: 483 RVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVV 542
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
HEF + D SHP++ IY ML + K+LK+ G+ + L ++ EEK L YHSEKLA
Sbjct: 543 HEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLA 602
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG++ T PGTTI V KNLR+C DCH+ K++S VY+RE+I+RDR R+HHF+ G CSC
Sbjct: 603 IAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCK 662
Query: 503 DYW 505
D+W
Sbjct: 663 DFW 665
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 146/352 (41%), Gaps = 77/352 (21%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYST--FEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
Q+HA LR G+ D + TL+ Y+ F A K+F+ +P + +N++I ++
Sbjct: 48 QVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQ 107
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG----- 163
N A+C + + + +P+ T + +AC A E G ++H ++ + G
Sbjct: 108 NNEPCKAICCYYKMMIAHA--RPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDV 165
Query: 164 ---------YGSKMN----------------LC-NSLIAMYSKCGSLGMAFEVFKGMPEK 197
YGS +C N++I Y KCG + A E+F M +K
Sbjct: 166 HIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDK 225
Query: 198 DV-------------------------------VSWSAMISGLAMNGHGRDAIESFGAMQ 226
+V +SWSAMI G G+ ++A+E F MQ
Sbjct: 226 NVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQ 285
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
R + P + VL+AC++ G +D+G +++ S F + +VD+ +
Sbjct: 286 REEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGT----ALVDMYAKC 341
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
G LD A+ + M K + W ++ +H E IE +++ Q+
Sbjct: 342 GRLDMAWDVFEKME-KKEVFTWNAMICGLGMHGR---AEDAIELFFKMQKQK 389
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E +F M+++ I F S + C +L G IHA V +
Sbjct: 264 MIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNS 323
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D+ L T L+D+Y+ + A +F+++ +++ WN +I + R DA+ LF
Sbjct: 324 NSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFF 383
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ +++ +P+ +T L VL ACAH G ++ G +I + E +G M ++ +
Sbjct: 384 KMQKQK--FRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLG 441
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G LG A EV MP E W A++ +G
Sbjct: 442 RAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHG 476
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/490 (41%), Positives = 305/490 (62%), Gaps = 3/490 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+ +M P + + + IK C +L G +IH+ V+ GY D + L+ LY+
Sbjct: 176 FYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYA 235
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A K+FD +PQR +AWN LIS Y +N ++++ LF + ESG +PD T
Sbjct: 236 KASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM--MESGFQPDSATI 293
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ +L +C+ LGAL+FG +H Y +G+ + L SLI MY++CG++ A EVF M E
Sbjct: 294 VSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKE 353
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
++VV+W+AMISG M+G+GR A+E F M+ G P++ TF VLSAC+H GL+D+G
Sbjct: 354 RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV 413
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK-PDSTIWRTLLGACRIH 315
M + +G++P + H C+VD+ GRAGLL+ AYQ I K P +W ++LGACR+H
Sbjct: 414 FSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 473
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
++ LG +V EH++ ++ + G YV+L N+Y+ G ++V+ +R M + L+ G ST
Sbjct: 474 RNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYST 533
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I + + F + D SHP+ N IY+ LDE+ + +GYV S +H+L EE+ AL
Sbjct: 534 IEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALR 593
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
YHSEKLA+AFG+L T G TIR+ KNLRIC DCH+ K +S + +RE+I+RD+ RFHHF+
Sbjct: 594 YHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFK 653
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 654 DGSCSCLDYW 663
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 7/283 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA ++ G L+T L+ L T A +LF +P D+ ++ L+ +
Sbjct: 109 QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFG 168
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ D + + + SG + T V++ACA L AL G++IH ++ GYGS M +
Sbjct: 169 FSIDTVLFYRRM--LFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYV 226
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+LIA+Y+K + +A +VF MP++ +++W+++ISG NG +++I F M +G
Sbjct: 227 QAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGF 286
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD T +LS+CS G +D G D + G N+ ++++ R G + +A
Sbjct: 287 QPDSATIVSLLSSCSQLGALDFGCWLHDYADGN-GFDLNVVLGTSLINMYTRCGNVSKAR 345
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
++ SM + + W ++ +H + G + +E E++A
Sbjct: 346 EVFDSMKER-NVVTWTAMISGYGMHGY---GRQAMELFTEMRA 384
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + P+E LF M + + + C + +L G +H +G
Sbjct: 261 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 320
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+ L T+L+++Y+ +A ++FD + +R+ V W +IS Y + R A+ LF
Sbjct: 321 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 380
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGY--GSKMNLCNSLIAM 177
+ G +P+++T + VL ACAH G ++ G ++ + E +G G + N+C ++ M
Sbjct: 381 EM--RAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVC--MVDM 436
Query: 178 YSKCGSLGMAFEVFKGMPEKD--VVSWSAMISGLAMN 212
+ + G L A++ K K+ W++M+ M+
Sbjct: 437 FGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 473
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 45/268 (16%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+++H +I G +L LI++ GS+ A +F +P D + +++ +
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-------------SH---CG-----LVD 251
G D + + M +G + TFT V+ AC SH CG V
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227
Query: 252 EGMMFLDRMSKD-------FGILP--NIHHYGCVVDLLGRAGLLDQA---YQLITSMGVK 299
++ L + D F +P I + ++ + GL ++ + L+ G +
Sbjct: 228 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 287
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVL---LLNLYSSVGDWE 353
PDS +LL +C LG + A +G + VL L+N+Y+ G+
Sbjct: 288 PDSATIVSLLSSCS-----QLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 342
Query: 354 KVKELREFMNEKGLQT-TPGCSTIGLKG 380
K +E+ + M E+ + T T S G+ G
Sbjct: 343 KAREVFDSMKERNVVTWTAMISGYGMHG 370
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/458 (43%), Positives = 298/458 (65%), Gaps = 3/458 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G IH+ V+R G+ + +L+ LY+ A K+FD++P++D VAWN +I+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + +AL L+ +N + G KPD T + +L ACA +GAL G+++H Y+ + G +
Sbjct: 67 NGKPEEALALYTEMNSK--GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N L+ +Y++CG + A +F M +K+ VSW+++I GLA+NG G++AIE F M+
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 229 -GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
G+ P + TF G+L ACSHCG+V EG + RM +++ I P I H+GC+VDLL RAG +
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+AY+ I SM ++P+ IWRTLLGAC +H L E +++L+ SGDYVLL N+Y+
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
S W V+++R+ M G++ PG S + + VHEF++ D SHP+ + IY L E+
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 364
Query: 408 QLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
+L+ GYV +I++ ++ EEK NA+ YHSEK+AIAF +++TP + I V KNLR+C D
Sbjct: 365 RLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 424
Query: 468 CHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
CH K++S VYNRE+++RDR RFHHF+ G CSC DYW
Sbjct: 425 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ + GE IH + G+GS + + NSL+ +Y+ CG + A++VF MPEKD+V+W+++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+G A NG +A+ + M G+ PD T +LSAC+ G + G M K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ N+H ++DL R G +++A L M V +S W +L+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 5/235 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + PEE L+ +M K I + F + C K +L G ++H +++ G
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+DLY+ + EA LFDE+ +++V+W LI N ++A+ LF
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G P ++T + +L AC+H G ++ G E R E+ ++ ++ + +
Sbjct: 180 YMESTE-GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
+ G + A+E K MP + +VV W ++ + HG + F +Q + P+
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV--HGDSDLAEFARIQILQLEPN 291
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 303/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ +E LF +M ++ + + F + + C SL G +H + +
Sbjct: 70 LIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIREND 129
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + + LMD+Y+ +A +F E+P +D ++WN +I Y +N +AL LF
Sbjct: 130 MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFG 189
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E KPD T +L ACA L +L+ G+++H +I +G+ S + N+L+ MY K
Sbjct: 190 DMVLE---MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVK 246
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG +A +F +P KD+++W+ MI+G M+G G +AI +F M++AG+ PD+ +F +
Sbjct: 247 CGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISI 306
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+DEG F + M + + P + HY C+VDLL R+G L AY+ I SM ++P
Sbjct: 307 LYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEP 366
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V EH+ EL+ + +G YVLL N Y+ WE+VK+LR+
Sbjct: 367 DATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQ 426
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ +GL+ PGCS I +K VH F+ + SHP+ +I +L + ++K GY +
Sbjct: 427 KIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRY 486
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N + +K AL HSEKLA+AFG+L PP TIRV+KNLR+C DCH AK +S
Sbjct: 487 ALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLG 546
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G C C +W
Sbjct: 547 REIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G +H ++ + TL+D+Y+ A +FD + R V W LI+ Y R
Sbjct: 17 GRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAR 76
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ +A+ LF ++RE G PD T VL ACA G+LE G+ +H YI E+ S +
Sbjct: 77 EGLSDEAIRLFHEMDRE--GVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNI 134
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+CN+L+ MY+KCGS+ A VF MP KD++SW+ MI G + N +A+ FG M
Sbjct: 135 FVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE 194
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
+ PD T +L AC+ +D G + ++ G + +VD+ + G+
Sbjct: 195 -MKPDGTTLACILPACASLASLDRGKEVHGHILRN-GFFSDQQVANALVDMYVKCGVPVL 252
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIH 315
A +L+ M D W ++ +H
Sbjct: 253 A-RLLFDMIPTKDLITWTVMIAGYGMH 278
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+LQACA+ G + G +H + K CN+L+ MY+KCG L A VF M +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VV+W+++I+ A G +AI F M R GV PD T T VL AC+ G ++ G +
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ ++ + NI ++D+ + G ++ A + M VK D W T++G
Sbjct: 124 YIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 309/538 (57%), Gaps = 35/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+RA+ S PE+ F + ++ P + +F ++ C GLQ+H +R
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 59 DGYQLDSQLMTTLMDLYSTF------EKSFE---------------AC----------KL 87
G+ D + T L+ LY+ K F AC KL
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F+ +P+RD +AWN +IS Y + +R+AL +F + E G K + V + VL AC LG
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE--GVKVNGVAMISVLSACTQLG 254
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
AL+ G H YI + + L +L+ +Y+KCG + A EVF GM EK+V +WS+ ++
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GLAMNG G +E F M++ GV P+ TF VL CS G VDEG D M +FGI
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIE 374
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + HYGC+VDL RAG L+ A +I M +KP + +W +LL A R++K++ LG +
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKK 434
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
++EL+ G YVLL N+Y+ DW+ V +R+ M KG++ PGCS + + G VHEF V
Sbjct: 435 MLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFV 494
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHP+ +I + +I+++L++AGY A+ T + ++ EEK +AL HSEK AIAFG+
Sbjct: 495 GDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGI 554
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ IR+ KNLR+C DCH + ++S ++NRE+I+RDR RFHHF++G CSCN +W
Sbjct: 555 MSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 139/318 (43%), Gaps = 39/318 (12%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIR 108
QIHA++ DG D L+ + + + + A ++ D + A N +I + +
Sbjct: 24 QIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCK 83
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + + + + KPD+ T ++QAC L E G ++H G+ +
Sbjct: 84 SPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDP 143
Query: 169 NLCNSLIAMYS-------------------------------KCGSLGMAFEVFKGMPEK 197
++ LI++Y+ +CG + A ++F+GMPE+
Sbjct: 144 HVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPER 203
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
D ++W+AMISG A G R+A+ F MQ GV + VLSAC+ G +D+G
Sbjct: 204 DPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAH 263
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
+ ++ I + +VDL + G +++A ++ M K T W + L ++
Sbjct: 264 SYIERN-KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT-WSSALNGLAMN-- 319
Query: 318 VTLGERVIEHLIELKAQE 335
GE+ +E L L Q+
Sbjct: 320 -GFGEKCLE-LFSLMKQD 335
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/530 (40%), Positives = 319/530 (60%), Gaps = 35/530 (6%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
+S E Y + + N F +K C K + G Q+H V++ G D +
Sbjct: 102 NSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVR 161
Query: 69 TTLMDLYST-----------FEKSFE---------------------ACKLFDEIPQRDT 96
+ L+ +Y ++ E + +LFD +P +
Sbjct: 162 SNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSV 221
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+WNV+IS +N ++A+ +F ++ + P+ VT + VL A + LGA+E G+ +H
Sbjct: 222 VSWNVMISGCAQNGHFKEAIEMFHDM--QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVH 279
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHG 215
+ ++ L ++LI MYSKCGS+ A +VF+G+ +K+ ++WSA+I GLAM+G
Sbjct: 280 LFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRA 339
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
RDA++ F MQ+AGV P D + GVLSACSH GLV+EG M G+LP I HYGC
Sbjct: 340 RDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGC 399
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+VDLLGRAG L++A QLI +M VKPD I + LLGAC++H ++ +GER+ + L+ +
Sbjct: 400 MVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHD 459
Query: 336 SGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRI 395
SG YV L N+++S G+WE V ++R M E ++ PGCS I L GV+HEF+V+D SHPR
Sbjct: 460 SGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRA 519
Query: 396 NEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT 455
I+ ML+E++ +L+ GY T L N+ +EK +AL YHSEK+AIAFG+++T P T
Sbjct: 520 EGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTP 579
Query: 456 IRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+++ KNLR+C DCH+ K++S +YNR++I+RDR RFHHF G CSC DYW
Sbjct: 580 LQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 51/310 (16%)
Query: 51 QIHARVLRDG---YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY- 106
QIHA ++ G + L + + + L + E + A K F +I + +WN +I
Sbjct: 33 QIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKY-ARKFFSQIHHPNCFSWNTIIRALA 91
Query: 107 ------IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
+ + + +AL F ++ + +P+ T VL+ACA L +E G+++H ++
Sbjct: 92 DSDDDDLFHVNSLEALLYFSHM-LTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVV 150
Query: 161 EHG----------------------------YGSKMN----LCNSLIAMYSKCGSLGMAF 188
+ G Y +++ L N +I Y + G L +
Sbjct: 151 KLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASR 210
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
E+F MP K VVSW+ MISG A NGH ++AIE F MQ V P+ T VL A S G
Sbjct: 211 ELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLG 270
Query: 249 LVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
++ G +F ++ + + ++D+ + G +D+A Q+ + K + W
Sbjct: 271 AIELGKWVHLFAEKNEIEIDDVLG----SALIDMYSKCGSIDKAVQVFEGIRNKKNPITW 326
Query: 306 RTLLGACRIH 315
++G +H
Sbjct: 327 SAIIGGLAMH 336
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + +E +F M+ +P N + + ++ G +H ++
Sbjct: 227 MISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNE 286
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
++D L + L+D+YS +A ++F+ I +++ + W+ +I + R RDAL F
Sbjct: 287 IEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHF 346
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMY 178
+ +++G P DV + VL AC+H G +E G I+ + ++ G ++ ++ +
Sbjct: 347 WRM--QQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLL 404
Query: 179 SKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ G L A ++ MP K D V A++ M+G+
Sbjct: 405 GRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGN 441
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 308/507 (60%), Gaps = 3/507 (0%)
Query: 2 VRAYSMSSSPEEG-FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
V+A + + P +F +MR + + F ++ L G +HA++LR G
Sbjct: 35 VQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFG 94
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+D + T+L+ +YS+ A LF +P+R+ ++W+ +I+ Y+R + ++AL LF
Sbjct: 95 LAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFR 154
Query: 121 NLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +P++ T VL AC LGALE G+ H YI + G + L +LI MY+
Sbjct: 155 EMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYA 214
Query: 180 KCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCGS+ A VF + P KDV++WSAMISGLAM+G + + F M GV P+ TF
Sbjct: 215 KCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFL 274
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
V AC H GLV EG +L RM++D+ I+P I HYGC+VDL GRAG + +A+ ++ SM +
Sbjct: 275 AVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPM 334
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD +W LL R+H + E ++ LIEL+ SG YVLL N+Y+ G WE V+ +
Sbjct: 335 EPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHV 394
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G++ PGCS I + GV+HEF V D SHP +I+ ML+EI ++LK+ GYV
Sbjct: 395 RDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNT 454
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
L +L E K ALS HSEKLA+A+G L T PGT IR+ KNLRIC DCH K++S V
Sbjct: 455 KEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKV 514
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
++RE+I+RD RFHHF +G CSC DYW
Sbjct: 515 FDREIIVRDCNRFHHFTQGLCSCRDYW 541
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 311/516 (60%), Gaps = 17/516 (3%)
Query: 1 MVRAYSMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+R +S S SP + + + + + SF +K C + ++H ++
Sbjct: 76 MIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFII 135
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R GY D L T L+ Y+ A K+F+E+P RD V+WN +ISCY + +AL
Sbjct: 136 RFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALK 195
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
++D + G D T + +L +CAH+GAL G ++HR+ E + + N+LI M
Sbjct: 196 MYDQMRISNVGF--DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDM 253
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCGSL A +F MP++DV +W++MI G ++G G +AI FG+M AGV P+ TF
Sbjct: 254 YAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITF 313
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+L CSH GLV EG+ + MS +F + P I HYGC+VDL GRAG L +A ++I S
Sbjct: 314 LGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSP 373
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ D +WRTLLG+C+IH++V +GE + +L++L + +GD VLL +Y+ D + V
Sbjct: 374 SQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVAR 433
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ + +G++TTPG S I + VH FVVDD SHP EIY+ L+E+ + + GY E
Sbjct: 434 MRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAME 493
Query: 418 ITSELHNLGAEEKGN--------ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+S L A + N + SYHSEKLAIA+G+ TP GT++ + KNLR+C DCH
Sbjct: 494 ESS----LVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCH 549
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NF K +S ++RE+I+RDR+RFHHF+ G CSC ++W
Sbjct: 550 NFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 585
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 36 AIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYS-TFEKSFEACKL-FDEIP 92
AI ++ C+ M L +IHA +L +GYQ + + L++ + + S +L F I
Sbjct: 7 AILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIH 66
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCL-FDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
T AWN +I + ++ + F N S +PD T +L+AC
Sbjct: 67 NPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGK 126
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
++H +I GY + LC +LI Y+ G + A +VF+ MP +D+VSW++MIS
Sbjct: 127 CREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQ 186
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
G +A++ + M+ + V D T +LS+C+H G + G+ + R + + ++ NI
Sbjct: 187 TGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQ-MHRFAGERRLVENIF 245
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G L A + SM K D W +++ +H
Sbjct: 246 VGNALIDMYAKCGSLASALSIFNSMP-KRDVFTWNSMIVGYGVH 288
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/553 (41%), Positives = 326/553 (58%), Gaps = 49/553 (8%)
Query: 1 MVRAYSMSSSPEE--GFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
++R +S S + LF E M + I N F +K C K + G QIH L
Sbjct: 89 IIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLAL 148
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEAC-------------------------------- 85
+ G+ D +M+ L+ +Y +AC
Sbjct: 149 KYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMI 208
Query: 86 -------------KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
LFD++ QR V+WN +IS Y +N +DA+ +F + + E +P+
Sbjct: 209 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGED-IRPN 267
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
VT + VL A + LG+LE GE +H Y + G L ++LI MYSKCG + A VF+
Sbjct: 268 YVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFE 327
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+P ++V++WSAMI+G A++G DAI+ F M++AGV P D + +L+ACSH GLV+E
Sbjct: 328 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEE 387
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + +M G+ P I HYGC+VDLLGR GLLD+A + I +M +KPD IW+ LLGAC
Sbjct: 388 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGAC 447
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+H++V +G+RV L+++ +SG YV L N+Y+S G+W +V E+R M E ++ PG
Sbjct: 448 RMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPG 507
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
CS I + GV+HEF+V+D SHPR EI ML EI+ +L++AGY T L NL E+K N
Sbjct: 508 CSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKEN 567
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
AL YHSEK+A AFG+++T PG IR+ KNLRIC DCH+ K++S VY R++ +RDR RFH
Sbjct: 568 ALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 627
Query: 493 HFREGRCSCNDYW 505
HF++G CSC DYW
Sbjct: 628 HFQDGSCSCMDYW 640
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 55/317 (17%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE----ACKLFDEIPQRDTVAWNVLISCY 106
QIHA ++ G D+ ++ +T + A K+F+++PQR+ +WN +I +
Sbjct: 34 QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 93
Query: 107 IRNQRTRD--ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ + A+ LF + +E +P+ T VL+ACA G ++ G++IH ++G+
Sbjct: 94 SESDEDKALIAITLFCEMMSDEF-IEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGF 152
Query: 165 GSKMNLCNSLIAMYSKCG------------------------------------------ 182
G + ++L+ MY CG
Sbjct: 153 GGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYM 212
Query: 183 SLG---MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFT 238
LG A +F M ++ VVSW+ MISG + NG +DA+E F M++ + P+ T
Sbjct: 213 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLV 272
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL A S G ++ G +L ++D GI + ++D+ + G++++A + +
Sbjct: 273 SVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLP- 330
Query: 299 KPDSTIWRTLLGACRIH 315
+ + W ++ IH
Sbjct: 331 RENVITWSAMINGFAIH 347
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/506 (39%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y P E LF M R +N F S A+ L G +IH ++R
Sbjct: 173 MISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRT 232
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D + + L D+Y EA +FD++ RD V W +I Y ++ R ++ LF
Sbjct: 233 GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF 292
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+L R SG +P++ T VL ACA+ + E G+K+H Y++ G+ ++L+ MYS
Sbjct: 293 ADLLR--SGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYS 350
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG++ A VFK P+ D+ SW+++I+G A NG +AI F + ++G PD TF G
Sbjct: 351 KCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVG 410
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC+H GLVD+G+ + + + +G+ HY C++DLL R+G D+A +I+ M +K
Sbjct: 411 VLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMK 470
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD +W +LLG CRIH ++ L +R E L E++ + YV L N+Y++ G W +V ++R
Sbjct: 471 PDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIR 530
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M+++G+ PG S I +K VH F+V D SHP+ EI + L +++K++K G+V +
Sbjct: 531 KTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTN 590
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K LSYHSEKLA+AFG+++TP GT I+V KNLR CVDCH K +S +
Sbjct: 591 FVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKIT 650
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
NR++I+RD RFH F +G CSC DYW
Sbjct: 651 NRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 182/406 (44%), Gaps = 83/406 (20%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
S I+ C+K L G ++H + G+ ++ L+++Y+ + ++ KLFDE+P+
Sbjct: 74 STLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPE 133
Query: 94 RDTVAWNVL-------------------------------ISCYIRNQRTRDALCLFDNL 122
RD +WN+L IS Y+R+ R +AL LF +
Sbjct: 134 RDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMM 193
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
R ++ K + T L A A + L G++IH YI G S + ++L MY KCG
Sbjct: 194 KRSDNS-KSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCG 252
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
S+ A +F M ++D+V+W+AMI +G ++ + F + R+G+ P++ TF+GVL+
Sbjct: 253 SIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLN 312
Query: 243 AC-----------------------------------SHCGLVDEGMMFLDRMSKDFGIL 267
AC S CG M+ +R+ K+
Sbjct: 313 ACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCG----NMVSAERVFKE-TPQ 367
Query: 268 PNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
P++ + ++ + G D+A ++L+ G +PD + +L AC H L ++
Sbjct: 368 PDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSAC---AHAGLVDKG 424
Query: 325 IEHLIELKAQ-----ESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+++ +K Q + Y +++L + G +++ + + M+ K
Sbjct: 425 LDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMK 470
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ R ++AL + ++ KP ++Q+C L+ G+K+H++I G+
Sbjct: 51 QQNRLKEALQILHQID------KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPG 104
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ + N L+ MY+KC SL + ++F MPE+D+ SW+ +ISG A G ++A F M
Sbjct: 105 LFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPE 164
Query: 228 AGVFPDDQTFTGVLSA 243
D+ ++T ++S
Sbjct: 165 R----DNFSWTAMISG 176
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 311/516 (60%), Gaps = 17/516 (3%)
Query: 1 MVRAYSMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+R +S S SP + + + + + SF +K C + ++H ++
Sbjct: 94 MIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFII 153
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R GY D L T L+ Y+ A K+F+E+P RD V+WN +ISCY + +AL
Sbjct: 154 RFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALK 213
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
++D + G D T + +L +CAH+GAL G ++HR+ E + + N+LI M
Sbjct: 214 MYDQMRISNVGF--DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDM 271
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCGSL A +F MP++DV +W++MI G ++G G +AI FG+M AGV P+ TF
Sbjct: 272 YAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITF 331
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+L CSH GLV EG+ + MS +F + P I HYGC+VDL GRAG L +A ++I S
Sbjct: 332 LGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSP 391
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ D +WRTLLG+C+IH++V +GE + +L++L + +GD VLL +Y+ D + V
Sbjct: 392 SQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVAR 451
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ + +G++TTPG S I + VH FVVDD SHP EIY+ L+E+ + + GY E
Sbjct: 452 MRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAME 511
Query: 418 ITSELHNLGAEEKGN--------ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+S L A + N + SYHSEKLAIA+G+ TP GT++ + KNLR+C DCH
Sbjct: 512 ESS----LVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCH 567
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NF K +S ++RE+I+RDR+RFHHF+ G CSC ++W
Sbjct: 568 NFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 603
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 36 AIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYS-TFEKSFEACKL-FDEIP 92
AI ++ C+ M L +IHA +L +GYQ + + L++ + + S +L F I
Sbjct: 25 AILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIH 84
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCL-FDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
T AWN +I + ++ + F N S +PD T +L+AC
Sbjct: 85 NPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGK 144
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
++H +I GY + LC +LI Y+ G + A +VF+ MP +D+VSW++MIS
Sbjct: 145 CREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQ 204
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
G +A++ + M+ + V D T +LS+C+H G + G+ + R + + ++ NI
Sbjct: 205 TGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQ-MHRFAGERRLVENIF 263
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G L A + SM K D W +++ +H
Sbjct: 264 VGNALIDMYAKCGSLASALSIFNSMP-KRDVFTWNSMIVGYGVH 306
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/536 (38%), Positives = 313/536 (58%), Gaps = 31/536 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+ S + + L +M ++ + A + ++ G +HA V+R+
Sbjct: 196 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 255
Query: 61 Y--QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ T L+D+Y+ A +LF+ + Q+ V+W +I+ IR+ R +A L
Sbjct: 256 NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARAL 315
Query: 119 FDNL-NRE----------------------------ESGCKPDDVTCLLVLQACAHLGAL 149
FD+ NR+ SG +P VT + +L CA GAL
Sbjct: 316 FDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGAL 375
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G+ +H YI + L +L+ MY+KCG + A +F +D+ W+A+I+G
Sbjct: 376 DLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 435
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G+G +A++ F M+R GV P+D TF G+L ACSH GLV EG ++M FG++P
Sbjct: 436 AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ 495
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLLGRAGLLD+A+++I SM +KP++ +W L+ ACR+HK+ LGE L+
Sbjct: 496 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL 555
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
E++ + G VL+ N+Y++ W +R+ M G++ PG S I + G VHEF++ D
Sbjct: 556 EIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGD 615
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP+I I +ML E+ ++L AGYV + ++ L N+ EEK AL+YHSEKLA+AFG+++
Sbjct: 616 QSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLIS 675
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T P T IR+ KNLR+C DCH K+LS +Y R +I+RDR RFHHFREG CSC DYW
Sbjct: 676 TAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 9/289 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +Y+ + P ++ ++R+ + F +K C + G +IH VL+ G
Sbjct: 95 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LM +Y A +FD++ +RD V+W+ +I RN+ AL L
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIR 214
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL--CNSLIAMY 178
+N + +P +V + ++ A + G+ +H Y+ + M + +L+ MY
Sbjct: 215 EMNFMQ--VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 272
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG LG+A ++F G+ +K VVSW+AMI+G + +A F + Q V +T
Sbjct: 273 AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVM----IWT 328
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+LSA + +D+ D+M + G+ P ++ L AG LD
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQM-RTSGVRPTKVTIVSLLSLCAVAGALD 376
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHA +++ + L L D S S + WN +I+ Y +
Sbjct: 61 QIHAHIIKTHFH--HALQIPLNDFPSGLSPSAQ---------------WNFVITSYTKRN 103
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ R+AL ++ L + + + D+ VL+AC + + G++IH ++ + G + +
Sbjct: 104 QPRNALNVYAQLRKMD--FEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFV 161
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+L+ MY +C + A VF M E+DVVSWS MI L+ N A+E M V
Sbjct: 162 GNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQV 221
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL-PNIHHYG-----CVVDLLGRAG 284
P + +++ D M + + + I N H G ++D+ + G
Sbjct: 222 RPSEVAMVSMVNL-----FADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG 276
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGAC 312
L A QL + K + W ++ C
Sbjct: 277 HLGLARQLFNGLTQKTVVS-WTAMIAGC 303
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/457 (43%), Positives = 297/457 (64%), Gaps = 3/457 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFE-ACKLFDEIPQRDTVAWNVLISCYIR 108
+HA + + G++ ++ ++ T++D Y+ + E A K+FD + +RD V+WN +I+ Y +
Sbjct: 73 SLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQ 131
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + +A+ L+ + G K + V VL ACAH GA++ G+ IH + G +
Sbjct: 132 NGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENV 191
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ S++ MYSKCG + MA F+ + EK+++SWSAMI+G M+G G++A+E F M+R+
Sbjct: 192 YVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRS 251
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ P+ TF VL+ACSH GL+DEG + + M ++FGI + HYGC+VDLLGRAG LD+
Sbjct: 252 GLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDE 311
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
AY LI M VKPD+ IW LL ACRIHK+V L E ++ L EL A SG YVLL N+Y+
Sbjct: 312 AYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAE 371
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
G W+ V+ +R + + ++ PG S+ LKG ++ F V D SHP+ EIY L+++ ++
Sbjct: 372 AGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLER 431
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
++ AGYV S LH+L EEK +AL HSEKLA+AF ++ + P + I + KNLR+C DC
Sbjct: 432 MQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDC 491
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K ++ + RE+IIRD RFHHF++G CSC DYW
Sbjct: 492 HTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 10/255 (3%)
Query: 82 FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQ 141
+A + FDEIP + V + S Y+RN +L LF + +S D+ L+
Sbjct: 1 MDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFS 60
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS--LGMAFEVFKGMPEKDV 199
A A + +H I++ G+ + N+++ Y+K GS L +A +VF M E+DV
Sbjct: 61 ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDV 119
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQR--AGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
VSW++MI+ A NG +AI + M G+ + + VL AC+H G + G
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIH 179
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
+++ + G+ N++ +VD+ + G ++ A + + K + W ++ +H
Sbjct: 180 NQVVR-MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEK-NILSWSAMITGYGMHGR 237
Query: 318 VTLGERVIEHLIELK 332
G+ +E E+K
Sbjct: 238 ---GQEALEIFTEMK 249
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + E L+ KM I N A S + C ++ G IH +V+R
Sbjct: 125 MIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVR 184
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + + T+++D+YS + A + F +I +++ ++W+ +I+ Y + R ++AL +
Sbjct: 185 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 244
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAM 177
F + R SG +P+ +T + VL AC+H G L+ G + + E G + + ++ +
Sbjct: 245 FTEMKR--SGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDL 302
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+ + K M K D W A++S
Sbjct: 303 LGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 334
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/508 (41%), Positives = 312/508 (61%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++A S + + + +M RI + + + IK C L G +H+ V G
Sbjct: 79 LIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y +S + L+ Y+ A K+FDE+PQR +AWN +IS Y +N +A+ +F+
Sbjct: 139 YASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFN 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN--LCNSLIAMY 178
+ ESG +PD T + VL AC+ LG+L+ G +H I G G +MN L SL+ M+
Sbjct: 199 KM--RESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIV--GTGIRMNVVLATSLVNMF 254
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CG +G A VF M E +VVSW+AMISG M+G+G +A+E F M+ GV P+ T+
Sbjct: 255 SRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYV 314
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLSAC+H GL++EG + M +++G++P + H+ C+VD+ GR GLL++AYQ + +
Sbjct: 315 AVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSS 374
Query: 299 KP-DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ +W +LGAC++HK+ LG V E+LI + + G YVLL N+Y+ G ++V+
Sbjct: 375 EELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVES 434
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R M ++GL+ G STI ++ + F + D SHP NEIY LDE+ + K AGY
Sbjct: 435 VRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYAPA 494
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
S +H L EE+ AL YHSEKLA+AFG++ T G T+R+ KNLRIC DCH+ K +S
Sbjct: 495 PESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISV 554
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
V NRE+I+RD+LRFHHFREG CSC+DYW
Sbjct: 555 VMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 42/279 (15%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
V+ A HL L+ + H ++ G L L+ + GS+ +F+ + + D
Sbjct: 16 VVSAGPHLRRLQ---QAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPD 72
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
++++I + G DA+ + M + + P TFT V+ AC+ L+ G +
Sbjct: 73 SFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHS 132
Query: 259 RM----------------------------SKDFGILP--NIHHYGCVVDLLGRAGLLDQ 288
+ K F +P +I + ++ + GL +
Sbjct: 133 HVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASE 192
Query: 289 AYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---L 342
A ++ M G +PDS + ++L AC + LG + E ++ + + VL L
Sbjct: 193 AVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRM--NVVLATSL 250
Query: 343 LNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
+N++S GD + + + + MNE + + T S G+ G
Sbjct: 251 VNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHG 289
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/483 (44%), Positives = 293/483 (60%), Gaps = 11/483 (2%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + LQ+HA VLR G D +L+TTL+D Y+ ++ A K+F
Sbjct: 103 DALSLSFALKASARCSDGPATLQLHALVLRLGCTADVRLITTLLDSYAKCDELASARKVF 162
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD----VTCLLVLQACA 144
DE+ RD +WN L++ + AL LF L R P + VT + L ACA
Sbjct: 163 DEMTVRDVASWNALLAGLAQGTEPSLALALFHRLVRSFQELPPREAPNVVTIIAALSACA 222
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD--VVSW 202
+G+L+ G +H + + G G + +CN+LI MYSKCGSL A EVF + +D +VS+
Sbjct: 223 QIGSLQDGLCVHEFARKIGVGGNVRVCNALIDMYSKCGSLARALEVFHSIKREDRTLVSY 282
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ I ++M+GHG DA++ F M + PD+ T+ VL C+H GLVDEG+ R+
Sbjct: 283 NTAIQAISMHGHGGDALKLFDEMPTC-IEPDEVTYIAVLCGCNHAGLVDEGL----RVFH 337
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+ PN+ HYG VVDLLGRAG L +AY I SM D +W+TLLGA + H V L E
Sbjct: 338 GMRVPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFPADIVLWQTLLGASKTHGDVELAE 397
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
L EL + GDYVLL N+Y+S W V +R+ M ++ PG S + GV+
Sbjct: 398 VAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVRDTMRSNDVRKVPGFSYTEISGVM 457
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
H+F+ D HPR+ EIY+ L EI ++ GY E ++ LH++G EEK ALSYHSEKLA
Sbjct: 458 HKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLA 517
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG++ATPPG T+RV KN+RIC DCH AK++S Y R +IIRDR RFH F +G+CSC+
Sbjct: 518 IAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKAYGRAIIIRDRARFHRFEDGQCSCS 577
Query: 503 DYW 505
DYW
Sbjct: 578 DYW 580
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 314/537 (58%), Gaps = 32/537 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAYS S PE F +++M +P N + F ++ C ++ LQ+H V++ G
Sbjct: 59 IIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLG 118
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ +Y+ + A +LFD IP+RD V+WN++I YI++ + A +F
Sbjct: 119 FGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFL 178
Query: 121 NL-----------------------------NREESGCKPDDVTCLLVLQACAHLGALEF 151
++ + +G + D V +L ACA+LGAL+
Sbjct: 179 DMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQ 238
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGL 209
G +H Y+ +G + +L+ MY KCG + A VF + +KDV W+AMI G
Sbjct: 239 GRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++G G +A+E F M+R G+ P+ TFT VL ACS+ GLV+EG M + + P+
Sbjct: 299 AIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPS 358
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDLLGR+G LD+A +LI M +KP + IW LL AC IH+ LG +V HL+
Sbjct: 359 IEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLV 418
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
E+ + SG Y+ L + ++ G W++ E+R M G+ +PG S++ L G+VHEF+
Sbjct: 419 EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGH 478
Query: 390 VSHPRINEIYQMLDEINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
HP++ +I L +I ++L+ GY L +L EEK A++ HSEKLAIAFG++
Sbjct: 479 QDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLI 538
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T PGTTIRV KNLRIC DCH AK++S +Y+RE+I+RDR+RFHHFR+G CSC DYW
Sbjct: 539 NTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHFRDGSCSCKDYW 595
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 305/508 (60%), Gaps = 7/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R YS ++P E F LF ++ + I + + +K C +L G Q+H ++ G
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + TL+++Y+ E A +FD I + V +N +I+ Y R R +AL LF
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF- 218
Query: 121 NLNREESG--CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
RE G KP+++T L VL +CA LG+L+ G+ IH+Y +H + + + +LI M+
Sbjct: 219 ---REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCGSL A +F+ M KD +WSAMI A +G ++ F M+ V PD+ TF
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFL 335
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L+ACSH G V+EG + +M FGI+P+I HYG +VDLL AG L+ AY+ I + +
Sbjct: 336 GLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPI 395
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P +WR LL AC H ++ L E+V E + EL GDYV+L NLY+ WE V L
Sbjct: 396 SPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSL 455
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M ++ PGCS+I + VVHEF D ++++ LDE+ K+LK++GYV +
Sbjct: 456 RKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDT 515
Query: 419 TSELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ +H N+ +EK L YHSEKLAI FG+L TPPGTTIRV KNLR+C DCHN AK++S
Sbjct: 516 SMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISL 575
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ R+V+ RD RFHHF +G+CSC D+W
Sbjct: 576 IFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
S+ A +F+ M E D+V +++M G + + + F + G+ PD+ TF +L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
AC+ ++EG L +S G+ N++ ++++ +D A
Sbjct: 137 KACAVAKALEEGRQ-LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/509 (41%), Positives = 308/509 (60%), Gaps = 8/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++R ++ SSSP + + +M IP + F SF +K C + + ++H V+R
Sbjct: 75 IIRGFAQSSSPIDAIVFYNQMVCDSFSIP-DTFTFSFVLKACERIKAERKCKEVHGSVIR 133
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY D + T L+ YS A ++FD++P RD VAWN +ISC+ + ++AL
Sbjct: 134 CGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQT 193
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
++ + E D T + ++ +CAHLGAL G ++HR+ E+G + + N+LI MY
Sbjct: 194 YNQMRSEN--VDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMY 251
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCGSL A +F M KD+ +W++MI G ++G G +AI F M A + P+ TF
Sbjct: 252 AKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFL 311
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L CSH GLV EG+ + + MS F + P + HYGC+VDL GRAG LD+A +++++
Sbjct: 312 GLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS- 370
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
DS +WR LLG+C+IHK+VT+GE + L EL A +GD +LL +Y+ D V +
Sbjct: 371 HNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARM 430
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA-E 417
R+ + +G +TTPG S I + VH+FVVDD SH E+Y+ L E+ Q GYV E
Sbjct: 431 RKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDE 490
Query: 418 ITSELHNLGAEEK-GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
S L L E + +YHSEKLAIAFG+ T GT IR+ KNLR+C DCH+F K +S
Sbjct: 491 SISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCRDCHSFIKAVS 550
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+NRE+I+RDR+RFHHF+ G CSCNDYW
Sbjct: 551 VAFNREIIVRDRVRFHHFKGGECSCNDYW 579
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 145/286 (50%), Gaps = 5/286 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
+IHA V+ G + L++ S A LF ++ T AWN +I + +
Sbjct: 22 KIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQMECPQTEAWNSIIRGFAQ 81
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ DA+ ++ + +S PD T VL+AC + A +++H + GY + +
Sbjct: 82 SSSPIDAIVFYNQM-VCDSFSIPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDADV 140
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+C +L+ YS GS+ +A +VF MP +D+V+W+AMIS + G ++A++++ M+
Sbjct: 141 IVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSE 200
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
V D T G++S+C+H G ++ G+ + R +++ G+ +++ ++D+ + G LDQ
Sbjct: 201 NVDIDGFTLVGLISSCAHLGALNIGVQ-MHRFARENGLDQSLYVGNALIDMYAKCGSLDQ 259
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
A + M + D W +++ +H + + ++E + Q
Sbjct: 260 AILIFDRMQ-RKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQ 304
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEVFKGM 194
L +LQ C L L KIH ++ G + + N L+ S GSL A +F M
Sbjct: 8 LALLQGCNSLKRLR---KIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSAC 244
+W+++I G A + DAI + M + PD TF+ VL AC
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKAC 115
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/423 (46%), Positives = 277/423 (65%), Gaps = 3/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A LFDE+PQRD ++W +IS Y ++ ++ +AL LF + R+ + C L +
Sbjct: 357 QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALAC--ALSS 414
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA + ALE G+++H + + G+ + N+L+AMY KCGS+ AF+VF+ + EKD+VSW
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI+G A +G G++A+ F +M+ + PDD T GVLSACSH GLVD+GM + + M +
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQ 533
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
++GI N HY C++DLLGRAG LD+A L+ SM PD+ W LLGA RIH LGE
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+ E + E++ SG YVLL NLY++ G W +V+E+R M +KG++ PG S + ++
Sbjct: 594 KAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKT 653
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
H F V D SHP IY L+E++ +LK G+V+ LH++ EEK + L YHSEKLA
Sbjct: 654 HIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLA 713
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
+AFG+L+ PPG IRV KNLR+C DCHN K +S + R++I+RD RFHHF EG CSC
Sbjct: 714 VAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCG 773
Query: 503 DYW 505
DYW
Sbjct: 774 DYW 776
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 121/247 (48%), Gaps = 13/247 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S EE +LF KM++ N A + A+ C + +L G Q+H R+++ G
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q L+ +Y EA +F++I ++D V+WN +I+ Y R+ ++AL LF+
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + KPDDVT + VL AC+H G ++ G E + +G + +I +
Sbjct: 496 SM---KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQRAGVFPDDQ 235
+ G L A + K MP D +W A++ ++G G A E M+ PD+
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME-----PDNS 607
Query: 236 TFTGVLS 242
+LS
Sbjct: 608 GMYVLLS 614
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LF+E+P RD AW ++S +++N +A +F+ + + ++V+ ++
Sbjct: 264 EARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM------PEKNEVSWNAMIAG 317
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+E ++ + S N+++ Y++CG++ A +F MP++D +SW
Sbjct: 318 YVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMISG A +G +A+ F M+R G + LS+C+ ++ G R+ K
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
G ++ + G+ G +++A+ + + K D W T++ H G+
Sbjct: 434 A-GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARH---GFGK 488
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSS 348
+ +K D V L+ + S+
Sbjct: 489 EALALFESMKMTIKPDDVTLVGVLSA 514
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
I D V WN IS Y+R + AL +F+ + R + VT ++ +
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST------VTYNAMISGYLSNNKFD 108
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
K+ + + S N +++ Y K G+L A +F MPEKDVVSW+AM+SG A
Sbjct: 109 CARKVFEKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA 164
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
NG +A + F M + ++ ++ G+LSA G +++ D D+ I+
Sbjct: 165 QNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVS-- 217
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ C++ R LD A L M V+ D W ++ + ++ R+ E L
Sbjct: 218 --WNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 43/377 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + + LF +M +K + + N FA G AR + D
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA----------QNGFVEEARKIFD 177
Query: 60 GYQLDSQL-MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ +++ L+ Y + +A +LFD + V+WN L+ Y+R +R DA L
Sbjct: 178 QMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
FD + D ++ +++ A G L ++ + + ++++ +
Sbjct: 238 FDRMPVR------DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFA----WTAMVSGF 287
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A +F+ MPEK+ VSW+AMI+G + A E F M + ++
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS----RNTSSWN 343
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+++ + CG +D+ + D M + I + ++ ++G ++A L M
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCI-----SWAAMISGYAQSGQSEEALHLFIKM-- 396
Query: 299 KPDSTIWRTLLGACRIHK-----HVTLGERVIEHLIELKAQESGDYV---LLLNLYSSVG 350
K D I AC + + LG+++ L+ KA Y+ LL +Y G
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLV--KAGFQTGYIAGNALLAMYGKCG 454
Query: 351 DWEKVKELREFMNEKGL 367
E+ ++ E + EK +
Sbjct: 455 SIEEAFDVFEDITEKDI 471
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/479 (42%), Positives = 288/479 (60%), Gaps = 3/479 (0%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P N + F I+ C +L G IH V + G LD + L+D+Y + +A
Sbjct: 834 PDN-YTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARF 892
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD++ +RD V W V+I Y ++L LFD + E G PD V + V+ ACA L
Sbjct: 893 LFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM--REEGVVPDKVAMVTVVFACAKL 950
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GA+ I YI + + L ++I M++KCG + A E+F M EK+V+SWSAMI
Sbjct: 951 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 1010
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+ +G GR A++ F M R+G+ P+ T +L ACSH GLV+EG+ F M +D+ +
Sbjct: 1011 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSV 1070
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
++ HY CVVDLLGRAG LD+A +LI SM + D +W LGACR HK V L E+
Sbjct: 1071 RXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAAT 1130
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
L+EL+ Q G Y+LL N+Y++ G WE V ++R+ M+++ L+ PG + I + H+F
Sbjct: 1131 SLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFS 1190
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
V D +HPR EIY+ML + +L++ GYV + LH++ E K L HSEKLAIAFG
Sbjct: 1191 VGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFG 1250
Query: 447 VLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ATP T IR+ KNLR+C DCH F K++S + R +I+RD RFHHF+EG CSC DYW
Sbjct: 1251 LIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/456 (40%), Positives = 271/456 (59%), Gaps = 6/456 (1%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P N + F I+ C +L G IH V + G LD + L+D+Y + +A
Sbjct: 158 PDN-YTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 216
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD++ +RD V W V+I Y + ++L LF+ + E G PD V + V+ ACA L
Sbjct: 217 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM--REEGVVPDKVAMVTVVFACAKL 274
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GA+ I YI + + L ++I MY+KCG + A E+F M EK+V+SWSAMI
Sbjct: 275 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 334
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+ +G GR A++ F M +G+ PD T +L ACSH GLV+EG+ F M +D+ +
Sbjct: 335 AAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSV 394
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
++ HY CVVDLLGRAG LD+A +LI SM ++ D +W LGACR HK V L E+
Sbjct: 395 RTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAAT 454
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
L+EL++Q G YVLL N+Y++ G WE V ++R+ M+++ L+ TPG + I + H+F
Sbjct: 455 SLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFS 514
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
V D +HPR EIY+ML ++ +L++ GYV + LH++ E K L HSEKLAIAFG
Sbjct: 515 VGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFG 574
Query: 447 VLATPPGTTIRVAKNLR---ICVDCHNFAKVLSGVY 479
++ATP T IR+ KNLR + ++ H + +++ VY
Sbjct: 575 LIATPEHTPIRIIKNLREKKLYLELHVHSSIVNLVY 610
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA+ G + + L+ YS + +A LFD + RD+V+W+V++ + +
Sbjct: 80 QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ F L R G +PD+ T V++AC L L+ G IH + + G +
Sbjct: 140 DYINCFGTFRELIR--CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 197
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
C +L+ MY KC + A +F M E+D+V+W+ MI G A G +++ F M+ GV
Sbjct: 198 CAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV 257
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMS-KDFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD V+ AC+ G + + + D + K F + ++ ++D+ + G ++ A
Sbjct: 258 VPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCVESA 315
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIH 315
++ M K + W ++ A H
Sbjct: 316 REIFDRMEEK-NVISWSAMIAAYGYH 340
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 6/266 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+H + G + + L+ YS + +A LFD + RD+V+W+V++ + +
Sbjct: 756 QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ F L R G +PD+ T V++AC L L+ G IH + + G +
Sbjct: 816 DYMNCFGTFRELIR--CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 873
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
C +L+ MY KC + A +F M E+D+V+W+ MI G A G+ +++ F M+ GV
Sbjct: 874 CAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGV 933
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMS-KDFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD V+ AC+ G + + D + K F + ++ ++D+ + G ++ A
Sbjct: 934 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL--DVILGTAMIDMHAKCGCVESA 991
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIH 315
++ M K + W ++ A H
Sbjct: 992 REIFDRMEEK-NVISWSAMIAAYGYH 1016
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LFEKMR++ + + A + C K ++ I + R
Sbjct: 232 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 291
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QLD L T ++D+Y+ A ++FD + +++ ++W+ +I+ Y + + R AL LF
Sbjct: 292 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 351
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ SG PD +T +L AC+H G +E G + + E + + + ++ +
Sbjct: 352 MM--LSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLG 409
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A ++ K M EKD W A +
Sbjct: 410 RAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF+KMR++ + + A + C K ++ I + R
Sbjct: 908 MIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 967
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QLD L T ++D+++ A ++FD + +++ ++W+ +I+ Y + + R AL LF
Sbjct: 968 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 1027
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL--CNSLIAMY 178
+ R SG P+ +T + +L AC+H G +E G + + E Y + ++ ++ +
Sbjct: 1028 MMLR--SGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE-DYSVRXDVKHYTCVVDLL 1084
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A ++ M EKD W A +
Sbjct: 1085 GRAGRLDEALKLIXSMTXEKDEGLWGAFLGA 1115
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/498 (41%), Positives = 304/498 (61%), Gaps = 3/498 (0%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
S P+E + +M I ++ + S IK + G IH V GY LD+ +
Sbjct: 97 SFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQ 156
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+ Y+ A K+FD++P++ VAWN +IS Y +N ++A+ LF ++ G
Sbjct: 157 AALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELF--FLMQDLG 214
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
KPD T + +L ACA +GA+ G +H YI+ + + + L +L+ MYS+CG++ A
Sbjct: 215 VKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAR 274
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
EVF M EK++V+W+AMISG M+GHG AIE F M G P++ TF VLSAC+H G
Sbjct: 275 EVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAG 334
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK-PDSTIWRT 307
LVDEG M +++G++P++ H C+VD+LGRAG L++AYQ I + K P +W
Sbjct: 335 LVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTA 394
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+LGAC++HK+ LG V EHL+ ++ + G YV+L N+Y+ G ++V+++R M L
Sbjct: 395 MLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRL 454
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ G STI + V+ F + D SHP+ N+IY LDE+ + + AGY+ S +H +
Sbjct: 455 KKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEE 514
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
EE+ AL YHSEKLAIAFG+L T G IR+ KNLR+C DCH K +S + NRE+ +RD
Sbjct: 515 EEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRD 574
Query: 488 RLRFHHFREGRCSCNDYW 505
RLRFHHF++G CSC DYW
Sbjct: 575 RLRFHHFKDGSCSCQDYW 592
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDL-YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
QIHAR++ G L+T L+ Y+ +LF IP+ DT ++ LI+ +
Sbjct: 37 QIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKF 96
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+++L + + + + T V+++ A L A GE IH ++ GYG
Sbjct: 97 SFPQESLLCYRRM--LLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAY 154
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ +L++ Y+K G + +A +VF MPEK VV+W++MISG NG G++A+E F MQ G
Sbjct: 155 VQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLG 214
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V PD TF +LSAC+ G + G + ++++ L N+ ++++ R G + +A
Sbjct: 215 VKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDL-NVVLGTALMNMYSRCGNVSKA 273
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
++ SM K + W ++ +H H G + IE E+
Sbjct: 274 REVFDSMEEK-NIVAWTAMISGYGMHGH---GSQAIELFNEM 311
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 305/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AY+ + P E +F +MR+ + + A + L G IHA V++ G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ L+ +L +Y+ + A LFD++ + + WN +IS Y +N R+A+ +F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ +PD ++ + ACA +G+LE ++ Y+ Y + + ++LI M++K
Sbjct: 313 EMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF ++DVV WSAMI G ++G R+AI + AM+R GV P+D TF G+
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H G+V EG F +RM+ D I P HY CV+DLLGRAG LDQAY++I M V+P
Sbjct: 431 LMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
T+W LL AC+ H+HV LGE + L + +G YV L NLY++ W++V E+R
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKGL GCS + ++G + F V D SHPR EI + ++ I +LK G+VA +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EE L HSE++AIA+G+++TP GT +R+ KNLR CV+CH K++S + +
Sbjct: 610 SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVD 669
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS ++ ++ ++ M+ R+ + F +K C L G +HA+V R G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ D + L+ LY+ + A +F+ +P+R V+W ++S Y +N +AL +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + + KPD V + VL A L L+ G IH + + G + +L SL MY
Sbjct: 210 FSQMRKMD--VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +F M +++ W+AMISG A NG+ R+AI+ F M V PD + T
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+SAC+ G +++ + + + ++ ++D+ + G ++ A +L+ +
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTL 385
Query: 299 KPDSTIWRTLLGACRIH 315
D +W ++ +H
Sbjct: 386 DRDVVVWSAMIVGYGLH 402
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 140/302 (46%), Gaps = 47/302 (15%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHAR+L G Q L+T L+ S+F A ++FD++P+ WN +I Y RN
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+DAL ++ N+ + + PD T +L+AC+ L L+ G +H + G+ + + +
Sbjct: 99 HFQDALLMYSNM--QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 171 CNSLIAMYSKCGSLGMAFEVFKG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
N LIA+Y+KC LG A VF+G +PE+ +VSW+A++S A NG +A+E F M++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 229 GVFPDDQTFTGVLSACS-----------------------------------HCGLVDEG 253
V PD VL+A + CG V
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLG 310
+ D+M PN+ + ++ + G +A + M V+PD+ + +
Sbjct: 277 KILFDKMKS-----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 311 AC 312
AC
Sbjct: 332 AC 333
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+A CL L SG D L+ + H L+ +IH + G L
Sbjct: 3 EASCLASPLLYTNSGIHSDSFYASLI-DSATHKAQLK---QIHARLLVLGLQFSGFLITK 58
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
LI S G + A +VF +P + W+A+I G + N H +DA+ + MQ A V PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
TF +L ACS + G F+ G ++ ++ L + L A +
Sbjct: 119 SFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 294 TSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL---LNLYSS 348
+ + P+ TI W ++ A + + + ++ + D+V L LN ++
Sbjct: 178 EGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP--DWVALVSVLNAFTC 234
Query: 349 VGDWEKVKELREFMNEKGLQTTP 371
+ D ++ + + + + GL+ P
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEP 257
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/456 (44%), Positives = 295/456 (64%), Gaps = 4/456 (0%)
Query: 47 MGGLQIHARVLRDGYQLDSQLMT--TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
G+ AR++ DG ++ L++ T++ Y+ EA +LF+ +P R+ V+WN +I+
Sbjct: 205 FSGMVDKARMVFDG-MMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIA 263
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y +N++ DA+ LF + + E G P+DVT + VL ACAHLGAL+ G+ IHR+I +
Sbjct: 264 GYAQNEKYADAIELFRQM-QHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKI 322
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ L N+L MY+KCG + A VF M E+DV+SWS +I GLAM G+ +A F
Sbjct: 323 EVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAE 382
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M G+ P+D +F G+L+AC+H GLVD+G+ + D M + +GI P I HYGCVVDLL RAG
Sbjct: 383 MIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAG 442
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
LDQA LI SM ++P+ +W LLG CRI+K GERV+ ++EL + SG V L N
Sbjct: 443 RLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLAN 502
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+Y+S+G + R M + TPGCS I + V+EF + D SHP+ IY M+ E
Sbjct: 503 VYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRE 562
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ ++K+AGY + +HN+ EEK +ALS HSEKLA+AFG++ T GTTIR+ KNLR+
Sbjct: 563 LKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRV 622
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCS 500
C DCH+ K++S + RE+++RDR RFHHF++G+CS
Sbjct: 623 CNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 84/366 (22%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP----FACSFAIKCCMKFCSLMGGLQIHARV 56
+++A+S ++ F Q +P P + + +K C ++ G ++H V
Sbjct: 96 LLKAFSQHNAWHTTISYFNN--QLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFV 153
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ G + + + +L+DLY + A KLFDE+ RD V+WN LIS Y + A
Sbjct: 154 TKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKAR 213
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+FD G +E + +++I+
Sbjct: 214 MVFD--------------------------GMME---------------KNLVSWSTMIS 232
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQ 235
Y++ G+L A ++F+ MP ++VVSW+AMI+G A N DAIE F MQ G+ P+D
Sbjct: 233 GYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDV 292
Query: 236 TFTGVLSACSHCGLVDEGMM---FLDRMSKDFGI-----LPNIHHY-GCVVD-------- 278
T VLSAC+H G +D G F+ R + G+ L +++ GCV++
Sbjct: 293 TLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEM 352
Query: 279 -----------LLGRA--GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGE 322
++G A G ++A+ M G++P+ + LL AC H L +
Sbjct: 353 HERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTAC---THAGLVD 409
Query: 323 RVIEHL 328
+ +E+
Sbjct: 410 KGLEYF 415
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
A+N L+ + ++ + F+N + PD+ T VL+ACA L + G+K+H
Sbjct: 92 AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHC 151
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+++++G S + + NSL+ +Y K G +A ++F M +DVVSW+ +ISG +G
Sbjct: 152 FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDK 211
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A F M + +++ ++S + G ++E + M + N+ + ++
Sbjct: 212 ARMVFDGMMEKNLV----SWSTMISGYARVGNLEEARQLFENMP-----MRNVVSWNAMI 262
Query: 278 DLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
+ A +L M G+ P+ ++L AC + LG + I I
Sbjct: 263 AGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLG-KWIHRFIRRNK 321
Query: 334 QESGDYV--LLLNLYSSVG 350
E G ++ L ++Y+ G
Sbjct: 322 IEVGLFLGNALADMYAKCG 340
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 284/431 (65%), Gaps = 3/431 (0%)
Query: 76 STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVT 135
+TF K +A LF E+P RD V+WN +++CY + + +AL LFD + G KP + T
Sbjct: 159 NTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM--RAVGVKPTEAT 216
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ +L ACAHLGAL+ G +H YI+++ + +L+ MY+KCG + +A +VF M
Sbjct: 217 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 276
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
KDV++W+ +I+G+A++GH ++A F M+ AGV P+D TF +LSACSH G+VDEG
Sbjct: 277 SKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQK 336
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
LD MS +GI P + HYGCV+DLL RAGLL++A +LI +M ++P+ LLG CRIH
Sbjct: 337 LLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIH 396
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+ LGE V + LI L+ SG Y+LL N+Y++ W+ +++R M G+ PG S
Sbjct: 397 GNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSV 456
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKGNAL 434
I LKG+VH FV D SHP N+IY+ L+EI+ +LK A G+ A+ L ++ E+K +AL
Sbjct: 457 IELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHSADTGDVLLDMEEEDKEHAL 516
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
HSEKLAIA+G+L IR+ KNLR+C DCH+ K++S VY RE+I+RDR RFHHF
Sbjct: 517 PVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHF 576
Query: 495 REGRCSCNDYW 505
+G CSC D+W
Sbjct: 577 EDGECSCLDFW 587
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ P E LF++MR + PT S + C +L GL +H + +
Sbjct: 185 MLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSL-LSACAHLGALDKGLHLHTYINDN 243
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+++S + T L+D+Y+ K A ++F+ + +D +AWN +I+ + ++A LF
Sbjct: 244 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLF 303
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMY 178
+ +E+G +P+D+T + +L AC+H G ++ G+K+ + S +G K+ +I +
Sbjct: 304 KEM--KEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 361
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
++ G L A E+ MP E + + A++ G ++G+
Sbjct: 362 ARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGN 398
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/525 (40%), Positives = 308/525 (58%), Gaps = 40/525 (7%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L+ M Q + N F + C K + G+QIHA + + G+ S + +L+ +Y
Sbjct: 112 LYSHMLQNSVLPNNFTFPSLLIACRK---IQHGMQIHAHLFKFGFGAHSVCLNSLIHMYV 168
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLIS-------------------------------C 105
TF+ EA ++F IP D+V+W LIS
Sbjct: 169 TFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAA 228
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y++ R +A LFD + E + D +L AC LGAL+ G+ IH YI +G
Sbjct: 229 YVQTNRFHEAFALFDRMKAENNNVL-DKFVATTMLSACTGLGALDQGKWIHEYIKRNGIE 287
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESFG 223
L +++ MY KCG L A +VF +P + + SW+ MI GLAM+G+G AI+ F
Sbjct: 288 LDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFK 347
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+R V PDD TF +L+AC+H GLV+EG + M + +GI P + H+GC+VDLLGRA
Sbjct: 348 EMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRA 407
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
G++ +A +LI M V PD T+ TLLGAC+ H+++ LGE + +IEL+ SG YVLL
Sbjct: 408 GMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLA 467
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
NLY++ G WE ++R+ M+++G++ PG S I L+G VHEF+ + +HP+ E++ +
Sbjct: 468 NLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVY 527
Query: 404 EINKQLKIAGYVAEITSEL--HNLGAEEKG-NALSYHSEKLAIAFGVLATPPGTTIRVAK 460
E+ + LK GYVA+ L H+ EE G N L YHSEKLAIAFG+ T PG T+R+ K
Sbjct: 528 EMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILK 587
Query: 461 NLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NLRIC DCH+ K++S V++RE+I+RDR RFH F+ G+CSC DYW
Sbjct: 588 NLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQDYW 632
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 165/361 (45%), Gaps = 51/361 (14%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDL---YSTFEKSFEACKLFDEIPQRDTVAW 99
C M L Q H++++R G + L+ L++ ST + A KLFD IPQ D +
Sbjct: 32 CQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLY 91
Query: 100 NVLISCYIRNQ--RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
N +I ++ +Q T L L+ ++ ++ P++ T +L AC ++ G +IH
Sbjct: 92 NTIIKGFLHSQLLPTNSILLLYSHM--LQNSVLPNNFTFPSLLIACR---KIQHGMQIHA 146
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
++ + G+G+ NSLI MY +L A VF +P D VSW+++ISG + G +
Sbjct: 147 HLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDE 206
Query: 218 AIE-----------SFGAMQRAGV---------------------FPDDQTFTGVLSACS 245
A S+ AM A V D T +LSAC+
Sbjct: 207 AFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACT 266
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI- 304
G +D+G + + ++ GI + +VD+ + G L++A Q+ S+ + P I
Sbjct: 267 GLGALDQGKWIHEYIKRN-GIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPL-PCRWIS 324
Query: 305 -WRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKVKELREFM 362
W ++G +H + GE I+ E++ Q + D + LNL ++ V+E R +
Sbjct: 325 SWNCMIGGLAMHGN---GEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYF 381
Query: 363 N 363
+
Sbjct: 382 S 382
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ AY ++ E F LF++M+ + + F + + C +L G IH + R+
Sbjct: 225 MMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRN 284
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDALC 117
G +LDS+L T ++D+Y +A ++F +P R +WN +I + A+
Sbjct: 285 GIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQ 344
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIA 176
LF + R+ PDD+T L +L ACAH G +E G Y I +G +M ++
Sbjct: 345 LFKEMERQRVA--PDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVD 402
Query: 177 MYSKCGSLGMAFEVFKGMP 195
+ + G + A ++ MP
Sbjct: 403 LLGRAGMVPEARKLIDEMP 421
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/509 (41%), Positives = 308/509 (60%), Gaps = 8/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++R ++ SSSP + + +M IP + F SF +K C + + ++H V+R
Sbjct: 75 IIRGFAQSSSPIDAIVFYNQMVCDSFSIP-DTFTFSFVLKACERIKAERKCKEVHGSVIR 133
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY D + T L+ YS A ++FD++P RD VAWN +ISC+ + ++AL
Sbjct: 134 CGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQT 193
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
++ + E D T + ++ +CAHLGAL G ++HR+ E+G + + N+LI MY
Sbjct: 194 YNQMRSEN--VDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMY 251
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCGSL A +F M KD+ +W++MI G ++G G +AI F M A + P+ TF
Sbjct: 252 AKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFL 311
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L CSH GLV EG+ + + MS F + P + HYGC+VDL GRAG LD+A +++++
Sbjct: 312 GLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS- 370
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
DS +WR LLG+C+IHK+VT+GE + L EL A +GD +LL +Y+ D V +
Sbjct: 371 HNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARM 430
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA-E 417
R+ + +G +TTPG S I + VH+FVVDD SH E+Y+ L E+ Q GYV E
Sbjct: 431 RKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGDE 490
Query: 418 ITSELHNLGAEEK-GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
S L L E + +YHSEKLAIAFG+ T GT IR+ KNLR+C DCH+F K +S
Sbjct: 491 SISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCRDCHSFIKAVS 550
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+NRE+I+RDR+RFHHF+ G CSCNDYW
Sbjct: 551 VAFNREIIVRDRVRFHHFKGGECSCNDYW 579
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 152/302 (50%), Gaps = 6/302 (1%)
Query: 36 AIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFEACKLFDEIP 92
AI ++ C+ + L +IHA V+ G + L++ S A LF ++
Sbjct: 6 AILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQME 65
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
T AWN +I + ++ DA+ ++ + +S PD T VL+AC + A
Sbjct: 66 CPQTEAWNSIIRGFAQSSSPIDAIVFYNQM-VCDSFSIPDTFTFSFVLKACERIKAERKC 124
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+++H + GY + + +C +L+ YS G + +A +VF MP +D+V+W+AMIS +
Sbjct: 125 KEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQ 184
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G ++A++++ M+ V D T G++S+C+H G ++ G+ + R +++ G+ +++
Sbjct: 185 GLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQ-MHRFARENGLDQSLYV 243
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
++D+ + G LDQA + M + D W +++ +H + + ++E +
Sbjct: 244 GNALIDMYAKCGSLDQAILIFDRMQ-RKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 302
Query: 333 AQ 334
Q
Sbjct: 303 IQ 304
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/500 (42%), Positives = 298/500 (59%), Gaps = 33/500 (6%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST----------FE------- 79
+ C K L+ G+Q+H RVL G D ++ L+D+Y+ FE
Sbjct: 168 LSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSM 227
Query: 80 --------------KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ A LFD +P+RDT+AW +I Y++ R RDAL F + +
Sbjct: 228 ASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYM--Q 285
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
+ D+ T + V+ ACA LGALE GE Y+ G + + N+LI MYSKCGS+
Sbjct: 286 ICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIE 345
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +VFK M +D +W+A+I GLA+NG G +AI+ F M RA PD+ TF GVL+AC+
Sbjct: 346 RALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACT 405
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLVD+G F M++ + I P + HYGC++D+LGRAG L +A I M +KP+STIW
Sbjct: 406 HAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIW 465
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
TLL +CR++ + +GE E L+EL S Y+LL N+Y+ W+ V+ +R+ + EK
Sbjct: 466 GTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEK 525
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
G++ PGCS I + G++HEFV D SHP EIY L+ + L+ AGYV ++T L +
Sbjct: 526 GIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEV 585
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
EEK L +HSEKLA+ F +L + IR+ KNLR+C+DCHN K++S +Y REVI+
Sbjct: 586 TEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIV 645
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RDR RFHHFR G CSC DYW
Sbjct: 646 RDRTRFHHFRHGSCSCKDYW 665
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 52/346 (15%)
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V WN LIS + R+ R + C F ++ R + VT + VL AC L G ++H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATA--VTYVSVLSACGKGKDLLLGMQVH 184
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG----------------------- 193
+ + E G + N+L+ MY++CG + A+ +F+G
Sbjct: 185 KRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVD 244
Query: 194 --------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
MPE+D ++W+AMI G G RDA+E+F MQ V D+ T V++AC+
Sbjct: 245 RARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACA 304
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
G ++ G M + GI ++ ++D+ + G +++A + M + D W
Sbjct: 305 QLGALETGEWARIYMGR-LGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNR-DKFTW 362
Query: 306 RTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSSVGDWEKVKELREF--- 361
++ ++ GE I+ L+A ++ D V + + ++ V + REF
Sbjct: 363 TAIILGLAVNGR---GEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLS 419
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
M E +P VVH + DV R ++ + LD I+K
Sbjct: 420 MTE-AYNISP--------TVVHYGCLIDVL-GRAGKLKEALDTIDK 455
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 6/244 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + F M+ ++ + F + C + +L G + R G
Sbjct: 264 MIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLG 323
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D + L+D+YS A +F ++ RD W +I N R +A+ +F
Sbjct: 324 IKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFY 383
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ R PD+VT + VL AC H G ++ G + ++E + + LI +
Sbjct: 384 RMLRALQ--TPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLG 441
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A + MP K + W +++ + +G I A + + PD+ T
Sbjct: 442 RAGKLKEALDTIDKMPMKPNSTIWGTLLASCRV--YGNSEIGELAAERLLELDPDNSTAY 499
Query: 239 GVLS 242
+LS
Sbjct: 500 ILLS 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA--------FEVFKGMPEKDVVSWSAMI 206
IH ++ + G S + +SLI MY+ G A G P V W+A+I
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAP----VMWNALI 133
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG +G + SF M RA T+ VLSAC + GM R+ + G+
Sbjct: 134 SGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLES-GV 192
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
LP+ +VD+ G +D A+ L M ++ ++ W +++ V + +
Sbjct: 193 LPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMAS-WTSVISGLVRSGQVDRARDLFD 251
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
H+ E +++ + +++ Y VG + E +M
Sbjct: 252 HMPE---RDTIAWTAMIDGYVQVGRFRDALETFRYMQ 285
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/457 (43%), Positives = 297/457 (64%), Gaps = 3/457 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFE-ACKLFDEIPQRDTVAWNVLISCYIR 108
+HA + + G++ ++ ++ T++D Y+ + E A K+FD + +RD V+WN +I+ Y +
Sbjct: 219 SLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQ 277
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + +A+ L+ + G K + V VL ACAH GA++ G++IH + G +
Sbjct: 278 NGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENV 337
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ S++ MYSKCG + MA F+ + EK+++SWSAMI+G M+G G++A+E F M+R+
Sbjct: 338 YVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRS 397
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ P+ TF VL+ACSH GL+DEG + + M ++FGI + HYGC+VDLLGRAG LD+
Sbjct: 398 GLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDE 457
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
AY LI M VKPD+ IW LL ACRIHK+V L E ++ L EL A SG YVLL N+Y+
Sbjct: 458 AYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAE 517
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W+ V+ +R + + ++ PG S+ LKG ++ F V D SHP+ EIY L+++ ++
Sbjct: 518 ARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLER 577
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
++ AGYV S LH+L EEK +AL HSEKLA+AF ++ + P + I + KNLR+C DC
Sbjct: 578 MQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDC 637
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K ++ + RE+IIRD RFHHF++G CSC DYW
Sbjct: 638 HTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + E L+ KM I N A S + C ++ G +IH +V+R
Sbjct: 271 MIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR 330
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + + T+++D+YS + A + F +I +++ ++W+ +I+ Y + R ++AL +
Sbjct: 331 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 390
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAM 177
F + R SG +P+ +T + VL AC+H G L+ G + + E G + + ++ +
Sbjct: 391 FTEMKR--SGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDL 448
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+ + K M K D W A++S
Sbjct: 449 LGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 480
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/505 (41%), Positives = 305/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R ++ L+ KM +K + + FA FA+K C L G IH ++ G
Sbjct: 789 MIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCG 848
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+D+Y+ A +FD++ RD V+W +IS Y N + L FD
Sbjct: 849 CSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFD 908
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG P+ V+ L VL AC +LGAL GE H Y+ + G+ + + +++ MYSK
Sbjct: 909 LM--RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSK 966
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL +A +F KD+V WSAMI+ ++GHGR AI+ F M +AGV P TFT V
Sbjct: 967 CGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCV 1026
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL++EG M+ M+++F I + +Y C+VDLLGRAG L +A LI +M V+P
Sbjct: 1027 LSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEP 1086
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D++IW +LLGACRIH ++ L E++ +HL L +G +VLL N+Y++ W +V+++R+
Sbjct: 1087 DASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRK 1146
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G G S + VH+F V D SHP+ ++Y L+E+ +K GYV
Sbjct: 1147 MMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDF 1206
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K ALSYHSE+LAIAFG++ T PGTT+R+ KNLRIC DCHN K++S + N
Sbjct: 1207 VLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVN 1266
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFH F +G CSC DYW
Sbjct: 1267 RVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 246/428 (57%), Gaps = 3/428 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + E LF +M +KR N A++ C +L G +IH + G
Sbjct: 278 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG 337
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++LD + T L+D+Y EA LF +P++D V+W L+S Y +N ++ +F
Sbjct: 338 FELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFR 397
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ + G +PD V + +L A + LG + +H Y+ G+ S + + SLI +YSK
Sbjct: 398 NMLSD--GIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSK 455
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTG 239
CGSLG A ++FKGM +DVV WS+MI+ ++G G +A+E F M + + V P++ TF
Sbjct: 456 CGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLV+EG+ DRM D+ + P+ H+G +VDLLGR G L +A +I M +
Sbjct: 516 ILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP 575
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
+W LLGACRIH ++ +GE ++L L +G Y+LL N+Y+ G W+ V ELR
Sbjct: 576 AGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELR 635
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ E+GL+ G S + ++G VH F+ D HP +IY++L ++ Q+ Y+ ++
Sbjct: 636 TRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLD 695
Query: 420 SELHNLGA 427
LH+ GA
Sbjct: 696 FLLHDTGA 703
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 168/345 (48%), Gaps = 13/345 (3%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS 81
+ K I + P + + C+K + HA++ G Q DS+++T +Y +F +
Sbjct: 717 KYKTIGSAPGTDTISCFSCLK--------KTHAKIFAYGLQYDSRILTKFAIMYVSFNRI 768
Query: 82 FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQ 141
A +F++IP + WNV+I + + R +L L+ + E G KPD L+
Sbjct: 769 DAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKM--MEKGLKPDKFAFPFALK 826
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
+CA L L+ G+ IH+++ G + + + +L+ MY+KCG + A VF M +D+VS
Sbjct: 827 SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS 886
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
W++MISG A NG+ + + F M+ +GV P+ + VL AC + G + +G F +
Sbjct: 887 WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 946
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
+ G +I ++D+ + G LD A L K D W ++ + IH H
Sbjct: 947 QT-GFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKA 1004
Query: 322 ERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ + +++ + S + +L+ S G E+ K + M E+
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEE 1049
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 141/311 (45%), Gaps = 7/311 (2%)
Query: 2 VRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR- 58
+R+Y EE LF M P N F A+K C L G IH +
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDN-FTIPIALKACAGLRMLELGKVIHGFAKKN 132
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D D + + L++LYS + EA K+F+E + DTV W +++ Y +N +AL L
Sbjct: 133 DEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALAL 192
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + D VT + V+ ACA L ++ G +H + + + L NSL+ +Y
Sbjct: 193 FSQMVMMDC-VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLY 251
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K G +A +F MPEKDV+SWS MI+ A N +A+ F M P+ T
Sbjct: 252 AKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVV 311
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
L AC+ ++EG + +++ G + ++D+ + D+A L +
Sbjct: 312 SALQACAVSRNLEEGKK-IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP- 369
Query: 299 KPDSTIWRTLL 309
K D W LL
Sbjct: 370 KKDVVSWVALL 380
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 131/267 (49%), Gaps = 12/267 (4%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+H++V + G D+ T L LY+ A K+FDE P + WN + Y R +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG-YGSKMN 169
+ + L LF +L +G PD+ T + L+ACA L LE G+ IH + ++ GS M
Sbjct: 82 QWEETLRLF-HLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++L+ +YSKCG +G A +VF+ D V W++M++G N +A+ F M
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 230 -VFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
V D T V+SAC+ V G + R D G LP ++ +++L + G
Sbjct: 201 CVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFD-GDLPLVN---SLLNLYAKTGC 256
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGAC 312
A L + M K D W T++ AC
Sbjct: 257 EKIAANLFSKMPEK-DVISWSTMI-AC 281
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/423 (45%), Positives = 276/423 (65%), Gaps = 3/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A LFDE+PQRD ++W +IS Y ++ ++ +AL LF + R+ + C L +
Sbjct: 357 QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALAC--ALSS 414
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA + ALE G+++H + + G+ + N+L+AMY KCGS+ AF+VF+ + EKD+VSW
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI+G A +G G++A+ F +M+ + PDD T GVLSACSH G VD+GM + + M +
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQ 533
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
++GI N HY C++DLLGRAG LD+A L+ SM PD+ W LLGA RIH LGE
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+ E + E++ SG YVLL NLY++ G W +V+E+R M +KG++ PG S + ++
Sbjct: 594 KAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKT 653
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
H F V D SHP IY L+E++ +LK G+V+ LH++ EEK + L YHSEKLA
Sbjct: 654 HIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLA 713
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
+AFG+L+ PPG IRV KNLR+C DCHN K +S + R++I+RD RFHHF EG CSC
Sbjct: 714 VAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCG 773
Query: 503 DYW 505
DYW
Sbjct: 774 DYW 776
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 121/247 (48%), Gaps = 13/247 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S EE +LF KM++ N A + A+ C + +L G Q+H R+++ G
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q L+ +Y EA +F++I ++D V+WN +I+ Y R+ ++AL LF+
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + KPDDVT + VL AC+H G ++ G E + +G + +I +
Sbjct: 496 SM---KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQRAGVFPDDQ 235
+ G L A + K MP D +W A++ ++G G A E M+ PD+
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME-----PDNS 607
Query: 236 TFTGVLS 242
+LS
Sbjct: 608 GMYVLLS 614
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LF+E+P RD AW ++S +++N +A +F+ + + ++V+ ++
Sbjct: 264 EARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM------PEKNEVSWNAMIAG 317
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+E ++ + S N+++ Y++CG++ A +F MP++D +SW
Sbjct: 318 YVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMISG A +G +A+ F M+R G + LS+C+ ++ G R+ K
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
G ++ + G+ G +++A+ + + K D W T++ H G+
Sbjct: 434 A-GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARH---GFGK 488
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSS 348
+ +K D V L+ + S+
Sbjct: 489 EALALFESMKMTIKPDDVTLVGVLSA 514
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
I D V WN IS Y+R + AL +F+ + R + VT ++ +
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST------VTYNAMISGYLSNNKFD 108
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
K+ + + S N +++ Y K G+L A +F MPEKDVVSW+AM+SG A
Sbjct: 109 CARKVFEKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA 164
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
NG +A + F M + ++ ++ G+LSA G +++ D D+ I+
Sbjct: 165 QNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVS-- 217
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ C++ R LD A L M V+ D W ++ + ++ R+ E L
Sbjct: 218 --WNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 43/377 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + + LF +M +K + + N FA G AR + D
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA----------QNGFVEEARKIFD 177
Query: 60 GYQLDSQL-MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ +++ L+ Y + +A +LFD + V+WN L+ Y+R +R DA L
Sbjct: 178 QMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
FD + D ++ +++ A G L ++ + + ++++ +
Sbjct: 238 FDRMPVR------DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFA----WTAMVSGF 287
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A +F+ MPEK+ VSW+AMI+G + A E F M + ++
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS----RNTSSWN 343
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+++ + CG +D+ + D M + I + ++ ++G ++A L M
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCI-----SWAAMISGYAQSGQSEEALHLFIKM-- 396
Query: 299 KPDSTIWRTLLGACRIHK-----HVTLGERVIEHLIELKAQESGDYV---LLLNLYSSVG 350
K D I AC + + LG+++ L+ KA Y+ LL +Y G
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLV--KAGFQTGYIAGNALLAMYGKCG 454
Query: 351 DWEKVKELREFMNEKGL 367
E+ ++ E + EK +
Sbjct: 455 SIEEAFDVFEDITEKDI 471
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/527 (39%), Positives = 311/527 (59%), Gaps = 22/527 (4%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + E+ LF E ++ + N + + C+ + IH ++
Sbjct: 370 MISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKL 429
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G++ D + LMD+YS K + +FD + RD V+WN +I+ Y+ + R +AL L
Sbjct: 430 GFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLL 489
Query: 120 DNLNREESGC---------------KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ R E+ KP+ +T + VL CA L A+ G++IH Y +
Sbjct: 490 HEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNML 549
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
S + + ++L+ MY+KCG L ++ VF MP K+V++W+ +I M+G G +A+E F
Sbjct: 550 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKN 609
Query: 225 M----QRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
M R G P++ TF V +ACSH GL+ EG+ RM D G+ P HY CVVDL
Sbjct: 610 MVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDL 669
Query: 280 LGRAGLLDQAYQLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
LGRAG L++AY+L+ +M + D W +LLGACRIH++V LGE ++L+ L+ +
Sbjct: 670 LGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASH 729
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEI 398
YVLL N+YSS G W K E+R+ M + G++ PGCS I + VH+F+ DVSHP+ ++
Sbjct: 730 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 789
Query: 399 YQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRV 458
+ L+ ++++++ GYV + + LHN+ +EK N L HSEKLAIAFG+L TPPGTTIRV
Sbjct: 790 HGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRV 849
Query: 459 AKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
AKNLR+C DCH K +S + RE+I+RD RFHHF+EG CSC DYW
Sbjct: 850 AKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 24/352 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++S S E F M + + + + + C L G +IHA VLR+
Sbjct: 268 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 327
Query: 61 YQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+++ + + L+D+Y + ++FD I R WN +IS Y RN AL LF
Sbjct: 328 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 387
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +G P+ T V+ AC H A E IH Y + G+ + N+L+ MYS
Sbjct: 388 IEMIK-VAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYS 446
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR------------ 227
+ G + ++ +F M +D VSW+ MI+G ++G +A+ MQR
Sbjct: 447 RMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDN 506
Query: 228 ----AGVF-PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
G + P+ T VL C+ + +G ++ + +I +VD+ +
Sbjct: 507 DDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM-LASDITVGSALVDMYAK 565
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
G L+ + ++ M K + W L+ AC +H GE +E + A+
Sbjct: 566 CGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGK---GEEALELFKNMVAE 613
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 170/390 (43%), Gaps = 45/390 (11%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R+ + S+ E + +M + FA +K L G QIHA ++ GY
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 62 QLDS-QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
S + TL+++Y + CK+FD I RD V+WN I+ R ++ AL F
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFR 183
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLG---ALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ E + T + V AC++LG L G+++H Y G K N+L+AM
Sbjct: 184 AMQME--NMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAM 240
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+K G + + +F+ ++D+VSW+ MIS + + +A+ F M GV D T
Sbjct: 241 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTI 300
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPN---------------------------- 269
VL ACSH +D G + ++ ++ N
Sbjct: 301 ASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHIL 360
Query: 270 ---IHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGE 322
I + ++ R GL ++A L M G+ P++T +++ AC + + E
Sbjct: 361 GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKE 420
Query: 323 RVIEHLIELKAQESGDYV--LLLNLYSSVG 350
+ + ++L +E YV L+++YS +G
Sbjct: 421 SIHGYAVKLGFKED-RYVQNALMDMYSRMG 449
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
P R T +W + R+ R+A+ + + SG +PD+ VL+A + L L+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTY--IEMTVSGARPDNFAFPAVLKAVSGLQDLKT 110
Query: 152 GEKIHRYISEHGYGSK-MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
GE+IH + GYGS + + N+L+ MY KCG +G +VF + ++D VSW++ I+ L
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALC 170
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
A+E+F AMQ + T V ACS+ G++
Sbjct: 171 RFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/457 (43%), Positives = 297/457 (64%), Gaps = 3/457 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFE-ACKLFDEIPQRDTVAWNVLISCYIR 108
+HA + + G++ ++ ++ T++D Y+ + E A K+FD + +RD V+WN +I+ Y +
Sbjct: 218 SLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQ 276
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + +A+ L+ + G K + V VL ACAH GA++ G++IH + G +
Sbjct: 277 NGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENV 336
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ S++ MYSKCG + MA F+ + EK+++SWSAMI+G M+G G++A+E F M+R+
Sbjct: 337 YVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRS 396
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ P+ TF VL+ACSH GL+DEG + + M ++FGI + HYGC+VDLLGRAG LD+
Sbjct: 397 GLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDE 456
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
AY LI M VKPD+ IW LL ACRIHK+V L E ++ L EL A SG YVLL N+Y+
Sbjct: 457 AYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAE 516
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W+ V+ +R + + ++ PG S+ LKG ++ F V D SHP+ EIY L+++ ++
Sbjct: 517 ARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLER 576
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
++ AGYV S LH+L EEK +AL HSEKLA+AF ++ + P + I + KNLR+C DC
Sbjct: 577 MQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDC 636
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K ++ + RE+IIRD RFHHF++G CSC DYW
Sbjct: 637 HTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 51 QIHARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+H LR G + D + L+ +Y + +A + FDEIP + V + S Y+RN
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+L LF + +S D+ L+ A A + +H I++ G+
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233
Query: 170 LCNSLIAMYSKCGS--LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ N+++ Y+K GS L +A +VF M E+DVVSW++MI+ A NG +AI + M
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292
Query: 228 --AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
G+ + + VL AC+H G + G +++ + G+ N++ +VD+ + G
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR-MGLEENVYVGTSIVDMYSKCGR 351
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
++ A + + K + W ++ +H G+ +E E+K
Sbjct: 352 VEMASRAFRKIKEK-NILSWSAMITGYGMHGR---GQEALEIFTEMK 394
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + E L+ KM I N A S + C ++ G +IH +V+R
Sbjct: 270 MIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR 329
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + + T+++D+YS + A + F +I +++ ++W+ +I+ Y + R ++AL +
Sbjct: 330 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 389
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAM 177
F + R SG +P+ +T + VL AC+H G L+ G + + E G + + ++ +
Sbjct: 390 FTEMKR--SGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDL 447
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+ + K M K D W A++S
Sbjct: 448 LGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/423 (46%), Positives = 282/423 (66%), Gaps = 6/423 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++F+E+P+RD V+WN +IS + N+ +ALCLF + E G P+ T + VL AC
Sbjct: 127 ARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMM--EEGFVPNRGTVVSVLSAC 184
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
GALE G+ +H ++ + L +L+ MY+KCG++ +A EVF G+ ++ +W+
Sbjct: 185 TGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWN 244
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
AMI+GLAMNG+ A++ F M+ G V PD+ TF GVL ACSH G VD G + +
Sbjct: 245 AMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQ 304
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+G+ + HY C+VDLL R+G L +A++LIT M +KPD +WR LLG CR+HK+V + E
Sbjct: 305 KYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAE 364
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
VI E++A SGD+VLL NLY++VG W V+++R M KG++ PGCS++ + G +
Sbjct: 365 NVIS---EMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSI 421
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
HEF+ D SHP ++I+ L EI +++ GYV E +++ EEK AL YHSEKLA
Sbjct: 422 HEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSEKLA 481
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG++ PP TIR+ KNLR C DCH+FAK++S +Y+RE+++RDR RFHHFR G CSCN
Sbjct: 482 IAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARFHHFRGGACSCN 541
Query: 503 DYW 505
D+W
Sbjct: 542 DFW 544
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 5/201 (2%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P E LF M ++ N + C +L G +H V + + D L T
Sbjct: 155 PVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTA 214
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+D+Y+ A ++F + R+T WN +I+ N + AL +F + +
Sbjct: 215 LVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGT-VA 273
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN--SLIAMYSKCGSLGMAF 188
PD+VT + VL AC+H G ++ G K H Y YG ++ L + ++ + ++ G L A
Sbjct: 274 PDEVTFVGVLLACSHAGFVDAG-KEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAH 332
Query: 189 EVFKGMPEK-DVVSWSAMISG 208
++ MP K DVV W A++ G
Sbjct: 333 KLITEMPMKPDVVVWRALLGG 353
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 49/262 (18%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+HA + G+ L ++ + Y + + +A ++FD +P+RDTV++N +I Y +
Sbjct: 32 SLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSG 91
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
A LF+ + P VT
Sbjct: 92 DVGSAQRLFERV------LAPTPVTW---------------------------------- 111
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
S++A + + G + A VF+ MPE+D+VSW+AMISG N +A+ F M G
Sbjct: 112 -TSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGF 170
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
P+ T VLSAC+ G ++ G +F+++ + +VD+ + G ++
Sbjct: 171 VPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGT----ALVDMYAKCGAVE 226
Query: 288 QAYQLITSMGVKPDSTIWRTLL 309
A ++ T + + ++ W ++
Sbjct: 227 LALEVFTGLRAR-NTCTWNAMI 247
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 156 HRYISEHGYGSKMN--LC----NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
H S H +K+ LC N+ I Y G + A VF GMP +D VS+++MI G
Sbjct: 28 HHLPSLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGY 87
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A++G A F + + P T+T +++ G V+ + M + + N
Sbjct: 88 AVSGDVGSAQRLFERV----LAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWN 143
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
GCV + L L ++ + G P+ ++L AC + G+ V H+
Sbjct: 144 AMISGCVGNRLPVEALC--LFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWV--HVF 199
Query: 330 ELKAQESGDYVL---LLNLYSSVGDWEKVKEL 358
K + D L L+++Y+ G E E+
Sbjct: 200 VEKKRLRWDEFLGTALVDMYAKCGAVELALEV 231
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/511 (39%), Positives = 309/511 (60%), Gaps = 20/511 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+G +L+ +M + + +A + +K C +L G ++H++VL+ G + + L+
Sbjct: 113 DGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLI 172
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVA------------------WNVLISCYIRNQRTRD 114
+LY +A ++FDE+P+RD VA W +I +RN +
Sbjct: 173 ELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNR 232
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL +F N+ RE+ P++VT + VL AC+ LGAL+ G + Y+ +H + +L
Sbjct: 233 ALEVFRNMQRED--VMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGAL 290
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I MYS+CG + A VF+ M EK+V+++++MI G A++G +A+E F + + G P
Sbjct: 291 INMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSS 350
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF GVL+ACSH GL + G M+KD+GI P I HYGC+VDLLGR G L++AY I
Sbjct: 351 VTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIR 410
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
M V PD + LL AC+IH ++ L ERV + L+ K +SG Y+LL N YSS G W++
Sbjct: 411 MMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKE 470
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
E+R M E+G++ PGCS+I + +HEF++ D+ HP+ +IY+ L+E+N+ L++ GY
Sbjct: 471 AAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGY 530
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
LH++ EK AL+ HSE+LAI +G+++T P TT+RV KNLR+C DCH K+
Sbjct: 531 TPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKL 590
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + R++++RDR RFHHF G CSC DYW
Sbjct: 591 ISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 114/304 (37%), Gaps = 68/304 (22%)
Query: 127 SGCKPDDVT-----CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
SG KP + + +LQ C H + I+ I + + + L+ + S
Sbjct: 21 SGTKPKNTPNRRRHFISLLQNCKHNNQIP---PIYAKIIRNHHHQDPFVVFELLRVCSNL 77
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
S+G A ++F +V ++A+I GL ++ + D I + M + + PD T VL
Sbjct: 78 NSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVL 137
Query: 242 SAC-----------------------------------SHCGLVDEGMMFLDRMSK---- 262
AC CG ++ D M +
Sbjct: 138 KACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVV 197
Query: 263 ----------DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLL 309
D GI + + ++D L R G ++A ++ +M V P+ +L
Sbjct: 198 ASTVMINYYFDHGIKDTV-CWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVL 256
Query: 310 GACRIHKHVTLGERVI----EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
AC + LG V +H IEL G L+N+YS GD ++ + + E M EK
Sbjct: 257 SACSELGALQLGRWVRSYMDKHRIELNHFVGG---ALINMYSRCGDIDEAQRVFEQMKEK 313
Query: 366 GLQT 369
+ T
Sbjct: 314 NVIT 317
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/473 (44%), Positives = 297/473 (62%), Gaps = 4/473 (0%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
SF++ + +L QIH+ +LR G D L TTL+D Y+ A ++FDEIP
Sbjct: 104 SFSLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPL 163
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
RD AWN LI+ + ++ +AL LF+ + E G K ++++ L L AC+ LGAL GE
Sbjct: 164 RDVAAWNALIAGLAQGSKSSEALALFNRMRAE--GEKINEISVLGALAACSQLGALRAGE 221
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMN 212
+H + + + +CN++I MY+KCG F VF M K VV+W+ MI AM+
Sbjct: 222 GVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMH 281
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G G A+E F M + V D T+ VL AC+H GLV+EG+ D M G+ N+ H
Sbjct: 282 GDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGR-GVNRNVKH 340
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
YG VVDLLGRAG L +AY++I SM + PD +W++LLGAC+ + +V + E L+E+
Sbjct: 341 YGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMG 400
Query: 333 AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSH 392
+ GD+VLL N+Y++ WE V +RE M + ++ PG S I ++GV+H+FV D SH
Sbjct: 401 SNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSH 460
Query: 393 PRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPP 452
P EIY LDEI ++K GYVAE + LH++G E+K NAL +HSEKLA+AFG+++T
Sbjct: 461 PDWREIYAKLDEIRFRIKAFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSE 520
Query: 453 GTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
GT IRV KNLRIC DCH K++S +Y++E+I+RDR RFH F++G CSC DYW
Sbjct: 521 GTPIRVNKNLRICGDCHVVIKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 17/264 (6%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A + IP T +N L+ R AL + PD +T L A
Sbjct: 57 AAHIHRHIPHPSTNDFNALLRGLARGPHPTHALTFLSTI------LHPDALTFSFSLIAS 110
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A AL +IH ++ G + + L +LI Y+KCG L A VF +P +DV +W+
Sbjct: 111 ARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWN 170
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG---MMFLDRM 260
A+I+GLA +A+ F M+ G ++ + G L+ACS G + G + +M
Sbjct: 171 ALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKM 230
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
D N+ V+D+ + G D+ +++ ++M W T++ A +H
Sbjct: 231 DLDI----NVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGD--- 283
Query: 321 GERVIEHLIEL-KAQESGDYVLLL 343
G R +E E+ K Q D V L
Sbjct: 284 GCRALELFEEMGKTQVEMDSVTYL 307
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + S E LF +MR + N + A+ C + +L G +HA V +
Sbjct: 172 LIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMD 231
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
++ Q+ ++D+Y+ + + ++F + + V WN +I + + AL LF
Sbjct: 232 LDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELF 291
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + + + + D VT L VL AC H G +E G ++ + G + S++ +
Sbjct: 292 EEMGKTQ--VEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGRGVNRNVKHYGSVVDLLG 349
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G LG A+ + MP DVV W +++ G+
Sbjct: 350 RAGRLGEAYRIINSMPIVPDVVLWQSLLGACKTYGN 385
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 311/505 (61%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + F+ + ++ I N + + C SL G +H +++ G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ ++ A LF+++P+RD V+WN +I+ ++++ + + A F
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +ESG KPD +T +L ACA AL G ++H I+E + + + LI+MY+K
Sbjct: 605 MM--QESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTK 662
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +VF +P+K+V SW++MI+G A +G G++A+E F MQ+ GV PD TF G
Sbjct: 663 CGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGA 722
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GL++EG+ M K+F I P + HYGC+VDL GRAGLL++A + I M V+P
Sbjct: 723 LSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEP 781
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +W LLGAC++H +V L E+ + +EL ++G +V+L N+Y++ G W++V ++R+
Sbjct: 782 DSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRK 841
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PG S I + G VH F DD +HP+ EI+ L+ ++ +++ GYV +
Sbjct: 842 VMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRY 901
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EK AL YHSE+LAI +G+L TPP T I ++KNLR+C DCH K +S +
Sbjct: 902 VLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITK 961
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I RD RFHHF++G CSC D+W
Sbjct: 962 RQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 38/365 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ +E F F KM + I N + C +L G QI ++ G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D ++ T L+ +Y+ +A ++F++I +++ VAWN +I+ Y+++++ +AL F
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +E G KP+ T +L C +LE G+ +H I + G S +++ N+L++M+
Sbjct: 504 ALLKE--GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A +F MP++D+VSW+ +I+G +G + A + F MQ +G+ PD TFTG+
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGL 621
Query: 241 LSACSHCGLVDEGMMF----------------------------LDRMSKDFGILP--NI 270
L+AC+ + EG ++ + F LP N+
Sbjct: 622 LNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV 681
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ + ++ + G +A +L M GVKPD W T +GA H L E + H
Sbjct: 682 YSWTSMITGYAQHGRGKEALELFYQMQQEGVKPD---WITFVGALSACAHAGLIEEGLHH 738
Query: 328 LIELK 332
+K
Sbjct: 739 FQSMK 743
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 40/392 (10%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F L E+M Q + + + C ++ G +++ +L+ G+ D + T L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
++++ +A K+FD +P RD V W +I+ R+ R + A LF + EE G +P
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRM--EEEGVQP 310
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D V + +L+AC H ALE G+K+H + E G+ +++ + ++++MY+KCGS+ A EVF
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ ++VVSW+AMI+G A +G +A F M +G+ P+ TF +L ACS +
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430
Query: 252 EGMMFLDR------------------MSKDFGILPNIHH------------YGCVVDLLG 281
G D M G L + H + ++
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 282 RAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
+ D A +Q + G+KP+S+ + ++L C+ + LG+ V H + +KA D
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV--HFLIMKAGLESD 548
Query: 339 YVL---LLNLYSSVGDWEKVKELREFMNEKGL 367
+ L++++ + GD K L M ++ L
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDL 580
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 192/390 (49%), Gaps = 38/390 (9%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E + E++ I S ++ C+KF +L G +I+ + + G Q D + TL+
Sbjct: 93 EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLI 152
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ + A ++FD++ ++D +WN+L+ Y+++ +A L + + ++ KPD
Sbjct: 153 NMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD--SVKPD 210
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T + +L ACA ++ G +++ I + G+ + + + +LI M+ KCG +G A +VF
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+P +D+V+W++MI+GLA +G + A F M+ GV PD F +L AC+H +++
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 253 GMMFLDRMSK------------------------------DFGILPNIHHYGCVVDLLGR 282
G RM + D N+ + ++ +
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 283 AGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
G +D+A+ M G++P+ + ++LGAC + G+++ +H+IE S D
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE-AGYGSDDR 449
Query: 340 V--LLLNLYSSVGDWEKVKELREFMNEKGL 367
V LL++Y+ G + + E ++++ +
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNV 479
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 52/356 (14%)
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
C +F +I +DT N +++ + + +A+ + + ++ + LL Q C
Sbjct: 66 CVVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALL--QLCI 121
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
L GE+I+ +I + G + + N+LI MY+KCG+ A ++F M EKDV SW+
Sbjct: 122 KFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNL 181
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM---- 260
++ G +G +A + M + V PD +TF +L+AC+ VD+G + +
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 261 ------------------------SKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLIT 294
+K F LP ++ + ++ L R G QA L
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 295 SM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSV 349
M GV+PD + +LL AC + + G++V + E+ ++ YV +L++Y+
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKC 360
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
G E E+ + + G + + ++ F H RI+E + +++
Sbjct: 361 GSMEDALEVFDLVK--------GRNVVSWTAMIAGF----AQHGRIDEAFLFFNKM 404
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 305/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P E +F +MR+ + + A ++ L G IH V++ G
Sbjct: 245 IISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMG 304
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +L LY+ A F+++ + WN +IS Y++N +A+ LF
Sbjct: 305 LECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFR 364
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +PD +T + ACA +G+LE + YIS + + + + SLI Y+K
Sbjct: 365 LM--KSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAK 422
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ MA VF +P+KDVV WSAM+ G ++G GR++I F AM++AGV P+D TF G+
Sbjct: 423 CGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGL 482
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+AC + GLV+EG RM +D+GI P HY CVVDLLGRAG LD+AY + +M ++P
Sbjct: 483 LTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEP 541
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W LL AC+IH+HVTLGE E L L +G YV L NLY+S W+ V ++R
Sbjct: 542 GVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRV 601
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKGL G S I + G + F D +HPR EI++ ++++ ++LK AG+V S
Sbjct: 602 LMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTES 661
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EE L HSE+LAIA+G+++TPPGTT+R+ KNLR C +CH K++S + +
Sbjct: 662 VLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVS 721
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 722 REIVVRDACRFHHFKDGACSCGDYW 746
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 51/416 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+VR YS ++ +M+ + + F+ +K C +L G ++H ++ R G
Sbjct: 144 IVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHG 203
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+ LY+ + A +F + R V+W +IS Y +N + +AL +F
Sbjct: 204 FESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFS 263
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + +PD + + VL+A + LE G+ IH + + G + +L SL ++Y+K
Sbjct: 264 EMRK--TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAK 321
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A F + ++ W+AMISG NG+ +AIE F M+ + PD T T
Sbjct: 322 CGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSS 381
Query: 241 LSACSH-----------------------------------CGLVDEGMMFLDRMSKDFG 265
++AC+ CG VD DR+
Sbjct: 382 IAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDV 441
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR----IHKHVTLG 321
++ + G + GR ++ + + GV P+ + LL AC+ + + L
Sbjct: 442 VVWSAMMVGYGLHGQGRESII--LFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLF 499
Query: 322 ERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
R+ ++ IE + Q Y +++L G ++ MN + PG S G
Sbjct: 500 HRMRDYGIEPRHQH---YACVVDLLGRAGHLDRAYNF--VMN---MPIEPGVSVWG 547
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 47/301 (15%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QI+A++L G Q L+ L++ S + A KLFD+ P D WN ++ CY R+
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 111 RTRDALCLFDNLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
A+ ++ R + C PD + VL+AC+ L ALE G ++H I HG+ S +
Sbjct: 153 FFGHAIEMY---ARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVF 209
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N L+A+Y+KCG + A VF + ++ +VSW+++ISG A NG +A+ F M++
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269
Query: 230 VFPDDQTFTGVLSACS-----------------------------------HCGLVDEGM 254
V PD VL A + CG V
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVAR 329
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGA 311
+F +++ P++ + ++ + G ++A ++L+ S ++PDS + + A
Sbjct: 330 LFFNQVEN-----PSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAA 384
Query: 312 C 312
C
Sbjct: 385 C 385
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
L L+ S G + A ++F P+ DV W+A++ + +G AIE + MQ A
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC 168
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V PD +F VL ACS ++ G ++ + G ++ +V L + G + +A
Sbjct: 169 VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRH-GFESDVFVQNGLVALYAKCGEIVRA 227
Query: 290 YQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL-- 345
+ G D TI W +++ + R+ + K D++ L+++
Sbjct: 228 NAV---FGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEM--RKTNVRPDWIALVSVLR 282
Query: 346 -YSSVGDWEKVKELREFMNEKGLQ 368
Y+ V D E K + + + GL+
Sbjct: 283 AYTDVEDLEHGKSIHGCVIKMGLE 306
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 311/505 (61%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + F+ + ++ I N + + C SL G +H +++ G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ ++ A LF+++P+RD V+WN +I+ ++++ + + A F
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +ESG KPD +T +L ACA AL G ++H I+E + + + LI+MY+K
Sbjct: 605 MM--QESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTK 662
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +VF +P+K+V SW++MI+G A +G G++A+E F MQ+ GV PD TF G
Sbjct: 663 CGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGA 722
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GL++EG+ M K+F I P + HYGC+VDL GRAGLL++A + I M V+P
Sbjct: 723 LSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEP 781
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +W LLGAC++H +V L E+ + +EL ++G +V+L N+Y++ G W++V ++R+
Sbjct: 782 DSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRK 841
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PG S I + G VH F DD +HP+ EI+ L+ ++ +++ GYV +
Sbjct: 842 VMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRY 901
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EK AL YHSE+LAI +G+L TPP T I ++KNLR+C DCH K +S +
Sbjct: 902 VLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITK 961
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I RD RFHHF++G CSC D+W
Sbjct: 962 RQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 38/365 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ +E F F KM + I N + C +L G QI ++ G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D ++ T L+ +Y+ +A ++F++I +++ VAWN +I+ Y+++++ +AL F
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +E G KP+ T +L C +LE G+ +H I + G S +++ N+L++M+
Sbjct: 504 ALLKE--GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A +F MP++D+VSW+ +I+G +G + A + F MQ +G+ PD TFTG+
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGL 621
Query: 241 LSACSHCGLVDEGMMF----------------------------LDRMSKDFGILP--NI 270
L+AC+ + EG ++ + F LP N+
Sbjct: 622 LNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV 681
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ + ++ + G +A +L M GVKPD W T +GA H L E + H
Sbjct: 682 YSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPD---WITFVGALSACAHAGLIEEGLHH 738
Query: 328 LIELK 332
+K
Sbjct: 739 FQSMK 743
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 40/392 (10%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F L E+M Q + + + C ++ G +++ +L+ G+ D + T L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
++++ +A K+FD +P RD V W +I+ R+ R + A LF + EE G +P
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRM--EEEGVQP 310
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D V + +L+AC H ALE G+K+H + E G+ +++ + ++++MY+KCGS+ A EVF
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ ++VVSW+AMI+G A +G +A F M +G+ P+ TF +L ACS +
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430
Query: 252 EGMMFLDR------------------MSKDFGILPNIHH------------YGCVVDLLG 281
G D M G L + H + ++
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 282 RAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
+ D A +Q + G+KP+S+ + ++L C+ + LG+ V H + +KA D
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV--HFLIMKAGLESD 548
Query: 339 YVL---LLNLYSSVGDWEKVKELREFMNEKGL 367
+ L++++ + GD K L M ++ L
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDL 580
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 192/390 (49%), Gaps = 38/390 (9%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E + E++ I S ++ C+KF +L G +I+ + + G Q D + TL+
Sbjct: 93 EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLI 152
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ + A ++FD++ ++D +WN+L+ Y+++ +A L + + ++ KPD
Sbjct: 153 NMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD--SVKPD 210
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T + +L ACA ++ G +++ I + G+ + + + +LI M+ KCG +G A +VF
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+P +D+V+W++MI+GLA +G + A F M+ GV PD F +L AC+H +++
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 253 GMMFLDRMSK------------------------------DFGILPNIHHYGCVVDLLGR 282
G RM + D N+ + ++ +
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 283 AGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
G +D+A+ M G++P+ + ++LGAC + G+++ +H+IE S D
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE-AGYGSDDR 449
Query: 340 V--LLLNLYSSVGDWEKVKELREFMNEKGL 367
V LL++Y+ G + + E ++++ +
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNV 479
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 52/356 (14%)
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
C +F +I +DT N +++ + + +A+ + + ++ + LL Q C
Sbjct: 66 CVVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALL--QLCI 121
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
L GE+I+ +I + G + + N+LI MY+KCG+ A ++F M EKDV SW+
Sbjct: 122 KFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNL 181
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM---- 260
++ G +G +A + M + V PD +TF +L+AC+ VD+G + +
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 261 ------------------------SKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLIT 294
+K F LP ++ + ++ L R G QA L
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 295 SM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSV 349
M GV+PD + +LL AC + + G++V + E+ ++ YV +L++Y+
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKC 360
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
G E E+ + + G + + ++ F H RI+E + +++
Sbjct: 361 GSMEDALEVFDLVK--------GRNVVSWTAMIAGF----AQHGRIDEAFLFFNKM 404
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 308/556 (55%), Gaps = 53/556 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV YS S + E F LF+ MR++ IP + + I
Sbjct: 337 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 396
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRD----------GYQLDSQLMTTLMDLY 75
C + G +IHA L++ G D + L+D+Y
Sbjct: 397 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 456
Query: 76 STFEKSFEACK-LFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
S +SF+A + +FD+IP +R+ V W V+I + + + DAL LF + E G P+
Sbjct: 457 SKC-RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 515
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGY--GSKMNLCNSLIAMYSKCGSLGMAFEV 190
T +L ACAHL A+ G++IH Y+ H S + N LI MYSKCG + A V
Sbjct: 516 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 575
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M +K +SW++M++G M+G G +A++ F M++AG PDD TF VL ACSHCG+V
Sbjct: 576 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 635
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ + D MS D+G+ P HY C +DLL R+G LD+A++ + M ++P + +W LL
Sbjct: 636 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 695
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACR+H +V L E + L+E+ A+ G Y L+ N+Y++ G W+ V +R M + G++
Sbjct: 696 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 755
Query: 371 PGCSTI-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PGCS + G KG F V D SHP +IY +L+ + ++K GYV E LH++ EE
Sbjct: 756 PGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 814
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K N L HSEKLA+A+G+L T PG IR+ KNLR+C DCH+ +S + + E+++RD
Sbjct: 815 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 874
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF+ G CSC YW
Sbjct: 875 RFHHFKNGSCSCGGYW 890
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 22 RQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
R R T P F +K C + S G H + +G++ + + L+ +YS
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204
Query: 80 KSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNL----NREESGCKPD 132
EA +FDEI QR D ++WN ++S ++++ AL LF + + + + + D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
++ + +L AC L A+ +++H +G + + N+LI Y+KCG + A +VF
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M KDVVSW+AM++G + +G+ A E F M++ + D T+T V++ S G E
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ +M G LPN V+ G Q ++
Sbjct: 385 ALNLFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 423
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 148/363 (40%), Gaps = 53/363 (14%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+ + + V WN+LI +I+ R A+ + + R +G +PD T VL+AC L
Sbjct: 111 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR--AGTRPDHFTLPHVLKACGEL 168
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK---DVVSWS 203
+ G H I +G+ S + +CN+L+AMYS+CGSL A +F + ++ DV+SW+
Sbjct: 169 PSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWN 228
Query: 204 AMISGLAMNGHGRDAIESFGAM------QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
+++S + + A++ F M + D + +L AC V +
Sbjct: 229 SIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVH 288
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
++ G P++ ++D + GL++ A ++ M K D W ++
Sbjct: 289 GNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-DVVSWNAMVAG------ 340
Query: 318 VTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
YS G++E EL + M ++ + +
Sbjct: 341 ----------------------------YSQSGNFEAAFELFKNMRKENIPL----DVVT 368
Query: 378 LKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYH 437
V+ + SH +N QM+ + L + + S +LGA +G + +
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMI--FSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 426
Query: 438 SEK 440
S K
Sbjct: 427 SLK 429
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 19/207 (9%)
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S +L ++A Y CG+ A V + + V W+ +I G AI M
Sbjct: 87 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 146
Query: 226 QRAGVFPDDQTFTGVLSACSH-----CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
RAG PD T VL AC CG G++ + G N+ +V +
Sbjct: 147 LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCN------GFESNVFICNALVAMY 200
Query: 281 GRAGLLDQA---YQLITSMGVKPDSTIWRTLLGA----CRIHKHVTLGERVIEHLIELKA 333
R G L++A + IT G+ D W +++ A + L ++ + E
Sbjct: 201 SRCGSLEEASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 259
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELRE 360
E D + ++N+ + G + V + +E
Sbjct: 260 NERSDIISIVNILPACGSLKAVPQTKE 286
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 308/556 (55%), Gaps = 53/556 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV YS S + E F LF+ MR++ IP + + I
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRD----------GYQLDSQLMTTLMDLY 75
C + G +IHA L++ G D + L+D+Y
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463
Query: 76 STFEKSFEACK-LFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
S +SF+A + +FD+IP +R+ V W V+I + + + DAL LF + E G P+
Sbjct: 464 SKC-RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 522
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGY--GSKMNLCNSLIAMYSKCGSLGMAFEV 190
T +L ACAHL A+ G++IH Y+ H S + N LI MYSKCG + A V
Sbjct: 523 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 582
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M +K +SW++M++G M+G G +A++ F M++AG PDD TF VL ACSHCG+V
Sbjct: 583 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 642
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ + D MS D+G+ P HY C +DLL R+G LD+A++ + M ++P + +W LL
Sbjct: 643 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 702
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACR+H +V L E + L+E+ A+ G Y L+ N+Y++ G W+ V +R M + G++
Sbjct: 703 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 762
Query: 371 PGCSTI-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PGCS + G KG F V D SHP +IY +L+ + ++K GYV E LH++ EE
Sbjct: 763 PGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 821
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K N L HSEKLA+A+G+L T PG IR+ KNLR+C DCH+ +S + + E+++RD
Sbjct: 822 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 881
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF+ G CSC YW
Sbjct: 882 RFHHFKNGSCSCGGYW 897
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 22 RQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
R R T P F +K C + S G H + +G++ + + L+ +YS
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211
Query: 80 KSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNL----NREESGCKPD 132
EA +FDEI QR D ++WN ++S ++++ AL LF + + + + + D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
++ + +L AC L A+ +++H +G + + N+LI Y+KCG + A +VF
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M KDVVSW+AM++G + +G+ A E F M++ + D T+T V++ S G E
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391
Query: 253 GMMFLDRMSKDFGILPN 269
+ +M G LPN
Sbjct: 392 ALNLFRQMIFS-GSLPN 407
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 149/366 (40%), Gaps = 53/366 (14%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A + + + V WN+LI +I+ R A+ + + R +G +PD T VL+AC
Sbjct: 115 ALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR--AGTRPDHFTLPHVLKAC 172
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK---DVV 200
L + G H I +G+ S + +CN+L+AMYS+CGSL A +F + ++ DV+
Sbjct: 173 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 232
Query: 201 SWSAMISGLAMNGHGRDAIESFGAM------QRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
SW++++S + + A++ F M + D + +L AC V +
Sbjct: 233 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 292
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
++ G P++ ++D + GL++ A ++ M K D W ++
Sbjct: 293 EVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-DVVSWNAMVAG--- 347
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
YS G++E EL + M ++ +
Sbjct: 348 -------------------------------YSQSGNFEAAFELFKNMRKENIPL----D 372
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
+ V+ + SH +N QM+ + L + + S +LGA +G +
Sbjct: 373 VVTWTAVIAGYSQRGCSHEALNLFRQMI--FSGSLPNCVTIISVLSACASLGAFSQGTEI 430
Query: 435 SYHSEK 440
+S K
Sbjct: 431 HAYSLK 436
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 19/207 (9%)
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S +L ++A Y CG+ A V + + V W+ +I G AI M
Sbjct: 94 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 153
Query: 226 QRAGVFPDDQTFTGVLSACSH-----CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
RAG PD T VL AC CG G++ + G N+ +V +
Sbjct: 154 LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCN------GFESNVFICNALVAMY 207
Query: 281 GRAGLLDQA---YQLITSMGVKPDSTIWRTLLGA----CRIHKHVTLGERVIEHLIELKA 333
R G L++A + IT G+ D W +++ A + L ++ + E
Sbjct: 208 SRCGSLEEASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 266
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELRE 360
E D + ++N+ + G + V + +E
Sbjct: 267 NERSDIISIVNILPACGSLKAVPQTKE 293
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/505 (40%), Positives = 302/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y S E F+K+ + + + F+ + C + G I + G
Sbjct: 186 IITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG 245
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T+L+D+Y A +F +P++D V+W+ +I Y N + AL LF
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFF 305
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E KPD T + VL ACA LGAL+ G + + + S L +LI MYSK
Sbjct: 306 QMQSEN--LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSK 363
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A+E+F M +KD V W+AM+ GL+MNGH + F +++ G+ PD+ TF G+
Sbjct: 364 CGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+H G V+EG F + M + F + P+I HYGC+VDLLGRAGLL++A+QLI +M +KP
Sbjct: 424 LCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKP 483
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LLG C++HK L E+V++ LIEL+ SG+YV L N+YS WE+ +++R
Sbjct: 484 NAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRS 543
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ +Q CS I + G+VHEF+V D SH +IY LDE+ ++LK G+V
Sbjct: 544 TMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEF 603
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK + L YHSEKLA+AFG++A+PP IRV KNLR+C DCH+ K++S +
Sbjct: 604 VLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITK 663
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD RFH F +G CSC DYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R ++ +L+ MR N F F +K C + + GL+IH+ +++ G
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + T+L+ LY + +A K+FD+IP ++ V+W +I+ YI + R+A+ F
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G KPD + + VL ACA LG GE I RYIS+ G G + + SL+ MY K
Sbjct: 205 KL--LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVK 262
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A +F MPEKD+VSWS MI G A NG + A++ F MQ + PD T GV
Sbjct: 263 CGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGV 322
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+ G +D G+ M ++ L N ++D+ + G + QA+++ T+M K
Sbjct: 323 LSACATLGALDLGIWASSLMDRN-EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KK 380
Query: 301 DSTIWRTLLGACRIHKH 317
D +W ++ ++ H
Sbjct: 381 DRVVWNAMMVGLSMNGH 397
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 136/259 (52%), Gaps = 4/259 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
IHAR+LR D+ L+ ++ F + + +F ++ + + WN +I +
Sbjct: 34 HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
DA+ L+ ++ G P++ T VL+ACA + G KIH + + GY + +
Sbjct: 94 CFDDAIHLYGSM--RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFV 151
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SL+++Y KC + A +VF +P+K+VVSW+A+I+G +GH R+AI +F + G+
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGL 211
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD + VL+AC+ G G ++DR D G+ N+ ++D+ + G L++A
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270
Query: 291 QLITSMGVKPDSTIWRTLL 309
+ ++M K D W T++
Sbjct: 271 LIFSAMPEK-DIVSWSTMI 288
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 310/505 (61%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + F+ + ++ I + + + C +L G + + ++R G
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG 538
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+ ++ A LF+++P+RD V+WN +I+ ++++ + A F
Sbjct: 539 FESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFK 598
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +ESG KPD +T +L ACA AL G ++H I+E + + LI+MY+K
Sbjct: 599 MM--QESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTK 656
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF +P+K+V SW++MI+G A +G G++A+E F MQ+ GV PD TF G
Sbjct: 657 CGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGA 716
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GL+ EG+ + M KDF I P + HYGC+VDL GRAGLL +A + I M VKP
Sbjct: 717 LSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKP 775
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +W LLGAC++H V L E+V + +EL + G YV+L N+Y++ G W++V ++R+
Sbjct: 776 DSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRK 835
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G+ PG S I + G VH F DD +HP+I EI+ L ++ ++K GYV +
Sbjct: 836 VMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRY 895
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EK +AL +HSE+LAIA+G+L TPP T I ++KNLR+C DCH K++S +
Sbjct: 896 VLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITK 955
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I RD RFHHF++G CSC D+W
Sbjct: 956 RQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 192/392 (48%), Gaps = 40/392 (10%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F L E+M Q + + + + + C ++ G ++ + +L G+ D + T L
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
++++ +A K+F+ +P+RD + W +I+ R+++ + A LF + EE G +P
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVM--EEEGVQP 304
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D V + +L+AC H ALE G+++H + E G +++ + +L++MY+KCGS+ A EVF
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ ++VVSW+AMI+G A +G +A F M +G+ P+ TF +L ACS +
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA---------------------- 289
+G DR+ K G + + ++ + + G L A
Sbjct: 425 QGRQIHDRIIKA-GYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAY 483
Query: 290 ------------YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
+Q + G+KPDS+ + ++L C+ + LG + ++ LI ES
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESD 542
Query: 338 DYV--LLLNLYSSVGDWEKVKELREFMNEKGL 367
++ L++++ + GD L M E+ L
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMPERDL 574
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 179/367 (48%), Gaps = 40/367 (10%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C+K +L G +IH + Q D + L+ +Y+ + A ++FDE+P +D
Sbjct: 111 LQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDV 170
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+WN+L+ Y++++R +A L + + ++ G KPD T + +L ACA ++ G ++
Sbjct: 171 YSWNLLLGGYVQHRRYEEAFRLHEQMVQD--GVKPDKYTFVYMLNACADAKNVDKGGELF 228
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I G+ + + + +LI M+ KCG + A +VF +P +D+++W++MI+GLA + +
Sbjct: 229 SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFK 288
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH----- 271
A F M+ GV PD F +L AC+H +++G RM K+ G+ I+
Sbjct: 289 QACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM-KEVGLDTEIYVGTAL 347
Query: 272 --------------------------HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDS 302
+ ++ + G +++A+ M G++P+
Sbjct: 348 LSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR 407
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELRE 360
+ ++LGAC + G ++ + +I+ + D V LL++Y+ G + + E
Sbjct: 408 VTFMSILGACSRPSALKQGRQIHDRIIK-AGYITDDRVRTALLSMYAKCGSLMDARNVFE 466
Query: 361 FMNEKGL 367
++++ +
Sbjct: 467 RISKQNV 473
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 36/255 (14%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+LQ C L GE+IH +I + + N LI+MY+KCG+ A ++F MP+KD
Sbjct: 110 LLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKD 169
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-- 256
V SW+ ++ G + +A M + GV PD TF +L+AC+ VD+G
Sbjct: 170 VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFS 229
Query: 257 --------------------------LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQ 288
+D K F LP ++ + ++ L R Q
Sbjct: 230 LILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289
Query: 289 A---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLL 343
A +Q++ GV+PD + +LL AC + + G+RV + E+ ++ YV LL
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEV-GLDTEIYVGTALL 348
Query: 344 NLYSSVGDWEKVKEL 358
++Y+ G E E+
Sbjct: 349 SMYTKCGSMEDALEV 363
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 302/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ + + F ++ + + + + F I+ C L G IH VL+ G
Sbjct: 72 MVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHG 131
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + +L+D+Y+ +A +LF+ + +D V W V+I Y + ++L LFD
Sbjct: 132 LLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFD 190
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G PD V + V+ ACA LGA+ + YI +G+ + L ++I MY+K
Sbjct: 191 RM--REEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAK 248
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A EVF M EK+V+SWSAMI+ +G G+DAI+ F M + P+ TF +
Sbjct: 249 CGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSL 308
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL++EG+ F + M ++ + P++ HY C+VDLLGRAG LD+A +LI +M V+
Sbjct: 309 LYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEK 368
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGACRIH + L E+ L+EL+ Q G YVLL N+Y+ G WEKV + R+
Sbjct: 369 DERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRD 428
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ L+ PG + I + ++F V D SHP+ EIY+ML + K+L++AGYV +
Sbjct: 429 MMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDF 488
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ E K L HSEKLAIAFG++A P G IR++KNLR+C DCH F+K++S +
Sbjct: 489 VLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMR 548
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF +G CSC DYW
Sbjct: 549 RSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA V+ +G D + L+ Y+ + +A LFD + RD+ W+V++ + +
Sbjct: 21 QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
F L R G PD+ T V++ C L+ G IH + +HG S +
Sbjct: 81 DHAGCYATFRELLR--CGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFV 138
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
C SL+ MY+KC + A +F+ M KD+V+W+ MI A + + +++ F M+ GV
Sbjct: 139 CASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGV 197
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD V++AC+ G + D + ++ G ++ ++D+ + G ++ A
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRN-GFSLDVILGTAMIDMYAKCGSVESAR 256
Query: 291 QLITSMGVKPDSTIWRTLLGACRIH 315
++ M K + W ++ A H
Sbjct: 257 EVFDRMKEK-NVISWSAMIAAYGYH 280
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 123/270 (45%), Gaps = 44/270 (16%)
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
+C+ +L C ++ + ++H ++ +G + + N L+ Y++ ++ A+ +F G+
Sbjct: 5 SCIDLLLRCRNVFHIR---QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL 61
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
+D +WS M+ G A G +F + R GV PD+ T V+ C + G
Sbjct: 62 TMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGR 121
Query: 255 MFLDRMSKDFGILPNIHHYGC--VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA- 311
+ D + K G+L + H+ C +VD+ + +++ A +L M + D W ++GA
Sbjct: 122 VIHDVVLK-HGLLSD--HFVCASLVDMYAKCIVVEDAQRLFERM-LSKDLVTWTVMIGAY 177
Query: 312 --CRIHKHVTLGERVIEH--------LIEL-----------KAQESGDYVL--------- 341
C ++ + L +R+ E ++ + +A+ + DY++
Sbjct: 178 ADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVI 237
Query: 342 ----LLNLYSSVGDWEKVKELREFMNEKGL 367
++++Y+ G E +E+ + M EK +
Sbjct: 238 LGTAMIDMYAKCGSVESAREVFDRMKEKNV 267
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/505 (40%), Positives = 301/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y S E F+K+ + + + F+ + C + G I + G
Sbjct: 186 IITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG 245
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T+L+D+Y A +F +P++D V+W+ +I Y N + AL LF
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFF 305
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E KPD T + VL ACA LGAL+ G + + + S L +LI MYSK
Sbjct: 306 QMQSEN--LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSK 363
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A+E+F M KD V W+AM+ GL+MNGH + F +++ G+ PD+ TF G+
Sbjct: 364 CGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+H G V+EG F + M + F + P+I HYGC+VDLLGRAGLL++A+QLI +M +KP
Sbjct: 424 LCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKP 483
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LLG C++HK L E+V++ LIEL+ SG+YV L N+YS WE+ +++R
Sbjct: 484 NAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRS 543
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ +Q CS I + G+VHEF+V D SH +IY LDE+ ++LK G+V
Sbjct: 544 TMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEF 603
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK + L YHSEKLA+AFG++A+PP IRV KNLR+C DCH+ K++S +
Sbjct: 604 VLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITK 663
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD RFH F +G CSC DYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R ++ +L+ MR N F F +K C + + GL+IH+ +++ G
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + T+L+ LY + +A K+FD+IP ++ V+W +I+ YI + R+A+ F
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G KPD + + VL ACA LG GE I RYIS+ G G + + SL+ MY K
Sbjct: 205 KL--LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVK 262
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A +F MPEKD+VSWS MI G A NG + A++ F MQ + PD T GV
Sbjct: 263 CGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGV 322
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+ G +D G+ M ++ L N ++D+ + G + QA+++ T+M K
Sbjct: 323 LSACATLGALDLGIWASSLMDRN-EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK- 380
Query: 301 DSTIWRTLLGACRIHKH 317
D +W ++ ++ H
Sbjct: 381 DRVVWNAMMVGLSMNGH 397
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 136/259 (52%), Gaps = 4/259 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
IHAR+LR D+ L+ ++ F + + +F ++ + + WN +I +
Sbjct: 34 HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
DA+ L+ ++ G P++ T VL+ACA + G KIH + + GY + +
Sbjct: 94 CFDDAIHLYGSM--RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFV 151
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SL+++Y KC + A +VF +P+K+VVSW+A+I+G +GH R+AI +F + G+
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGL 211
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD + VL+AC+ G G ++DR D G+ N+ ++D+ + G L++A
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270
Query: 291 QLITSMGVKPDSTIWRTLL 309
+ ++M K D W T++
Sbjct: 271 LIFSAMPEK-DIVSWSTMI 288
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/531 (39%), Positives = 316/531 (59%), Gaps = 36/531 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++ Y+ EE LF +M +K + N + C K L+GG I+ + ++
Sbjct: 208 VLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIK 267
Query: 59 DG-YQLDSQLMTTLMDLYST----------------------------FEKSFE---ACK 86
+G + + L L+D++++ F + A K
Sbjct: 268 EGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARK 327
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
FD++P+RD V+W +I Y+R R ++ L LF ++ + S KPD+ T + +L ACAHL
Sbjct: 328 YFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDM--QMSNVKPDEFTMVSILTACAHL 385
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GALE GE YI ++ + + N+LI MY KCG++ A ++F M +KD +W+AMI
Sbjct: 386 GALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMI 445
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
GLA NGHG +A+ F M A V PD+ T+ GV+ AC+H GLV +G F M+ GI
Sbjct: 446 VGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGI 505
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
PN+ HYGC+VDLLGRAG L +A ++I +M VKP+S +W +LLGACR+HK+V L E
Sbjct: 506 KPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAN 565
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
++EL+ + YVLL N+Y++ W+ + +R+ M E+G++ PGCS + + G+V+EFV
Sbjct: 566 EILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFV 625
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
D SHP+ EIY L+ + + L AGY + + ++G E+K AL HSEKLAIA+
Sbjct: 626 AGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYA 685
Query: 447 VLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREG 497
++++ G TIR+ KNLR+CVDCH+ A V+S VYNRE+I+RD+ RFHHFR G
Sbjct: 686 LISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 37/343 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ YS + E G L++ M I + F F +K K +L G + + G
Sbjct: 106 MIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHG 165
Query: 61 YQLDSQLMTT--LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ LDS L + L+S A K+FD + V WNV++S Y R +R ++ L
Sbjct: 166 F-LDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRL 224
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-RYISEHGYGSKMNLCNSLIAM 177
F + ++ P+ VT +L+L AC+ L L G+ I+ +YI E + L N+LI M
Sbjct: 225 FIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDM 284
Query: 178 YSKCGSL-------------------------------GMAFEVFKGMPEKDVVSWSAMI 206
++ CG + +A + F MPE+D VSW+AMI
Sbjct: 285 FASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMI 344
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G ++ + F MQ + V PD+ T +L+AC+H G ++ G + K+ I
Sbjct: 345 DGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKN-KI 403
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ ++D+ + G +++A ++ M K D W ++
Sbjct: 404 KNDTFIGNALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMI 445
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 15/314 (4%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMT 69
P LF K P + F S ++ C+ M + QIH++ ++ G + +T
Sbjct: 14 PNLSLSLFLKRMISNTPLHSFVKSPI--SLLETCNTMYEINQIHSQTIKTGLSSNHLFLT 71
Query: 70 TLMDLYSTFEKS--FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
++ T E + A K+FDEIPQ WN +I Y R + + L+ +
Sbjct: 72 KVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVH-- 129
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYSKCGSLGM 186
KPD T +L+ AL++G+ + + HG+ S + + I ++S CG +
Sbjct: 130 NIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNY 189
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVLSAC 244
A ++F +VV+W+ ++SG ++ F M++ V P+ T +LSAC
Sbjct: 190 ARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSAC 249
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
S + G ++ K+ + PN+ ++D+ G +D A + M + D
Sbjct: 250 SKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR-DVIS 308
Query: 305 WRTLL----GACRI 314
W +++ CRI
Sbjct: 309 WTSIVTGFANTCRI 322
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/422 (45%), Positives = 274/422 (64%), Gaps = 2/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD +PQRD VAWN +++ Y+R R+R+AL LFD + +++G +VT + VL AC
Sbjct: 209 ARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEM--QKAGVAVSEVTLVSVLTAC 266
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A +GALE G +H Y+ G + L +L+ MYSKCG + M+ EVF+ M E+++ +W+
Sbjct: 267 AQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWT 326
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+ +SGLAMNG G + +E F M+ AG+ P+ TF VL CS GLV+EG D M
Sbjct: 327 SALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDK 386
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ P + HYGC+VDL GRAG LD A I SM V+P +W LL A RIH +V LG+
Sbjct: 387 HKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKH 446
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
+ L E++++ +VLL N+Y+ +W+ V ++R M KG++ PGCS I + G VH
Sbjct: 447 AMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVH 506
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
EF V SHPR +I ML E++ +L++ GY A L ++ EEK A+S HSEKLA+
Sbjct: 507 EFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLAL 566
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ P T IR+ KNLR+C DCH++ K++S V++RE+++RDR RFHHF+ G CSC D
Sbjct: 567 AFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRD 626
Query: 504 YW 505
YW
Sbjct: 627 YW 628
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+++ S G + A E+F GMP++D V+W+AM++G G R+A+ F MQ+AGV
Sbjct: 194 TAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVA 253
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
+ T VL+AC+ G ++ G M++ G+ ++ +VD+ + G++ + +
Sbjct: 254 VSEVTLVSVLTACAQMGALERG-MWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSME 312
Query: 292 LITSM 296
+ +M
Sbjct: 313 VFETM 317
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E LF++M++ + + + C + +L G+ +H+ V G
Sbjct: 227 MLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRG 286
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ L T L+D+YS + ++F+ + +R+ W +S N + L LF
Sbjct: 287 MRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFK 346
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E +G +P+ VT + VL+ C+ G +E G + + H + ++ +Y
Sbjct: 347 RM--ESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYG 404
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A + MP E W A+++
Sbjct: 405 RAGRLDDAVDFINSMPVEPHEGVWGALLNA 434
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/424 (45%), Positives = 283/424 (66%), Gaps = 3/424 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A LF E+P RD V+WN +++CY + + +AL LFD + G KP + T + +L A
Sbjct: 341 DAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM--RAVGVKPTEATVVSLLSA 398
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CAHLGAL+ G +H YI+++ + +L+ MY+KCG + +A +VF M KDV++W
Sbjct: 399 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 458
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ +I+G+A++G+ ++A + F M+ AGV P+D TF +LSACSH G+VDEG LD MS
Sbjct: 459 NTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSS 518
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+GI P + HYGCV+DLL RAG L++A +LI +M ++P+ + LLG CRIH + LGE
Sbjct: 519 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGE 578
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
V + LI L+ SG Y+LL N+Y++ W+ +++R M G+ PG S I LKG+V
Sbjct: 579 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 638
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKGNALSYHSEKL 441
H FV D SHP N+IY+ L+EI+ +LK A GY A+ + L ++ E+K +AL+ HSEKL
Sbjct: 639 HRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKL 698
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
AIA+G+L IR+ KNLR+C DCH+ K++S VY RE+I+RDR RFHHF +G CSC
Sbjct: 699 AIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSC 758
Query: 502 NDYW 505
D+W
Sbjct: 759 LDFW 762
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 185/364 (50%), Gaps = 13/364 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA S S +P E L+ M Q + + F IK C + GL +H V++ G
Sbjct: 166 LIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSG 225
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ DS ++++L+ LY+ + A +LF+ RD V+WN +I Y+++ A +FD
Sbjct: 226 FECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFD 285
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ C+ D ++ ++ A +G ++ +++ + E S NS++A + K
Sbjct: 286 RMV-----CR-DVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVS----WNSMLAGFVK 335
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ AF +F MP +DVVSW++M++ A G +A+ F M+ GV P + T +
Sbjct: 336 CGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSL 395
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H G +D+G + L D I N +VD+ + G + A Q+ +M K
Sbjct: 396 LSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK- 453
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELR 359
D W T++ IH +V +++ + + E + + +V +L+ S G ++ ++L
Sbjct: 454 DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLL 513
Query: 360 EFMN 363
+ M+
Sbjct: 514 DCMS 517
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 298/491 (60%), Gaps = 2/491 (0%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
Y + +M + + + + IK C +L G IH VL +G+ D + T LM
Sbjct: 96 LYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSF 155
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
Y A K+FD++ R V WN +IS Y +N ++A+ LFD + +E G +P+
Sbjct: 156 YGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRM--KEIGVEPNSA 213
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T + VL ACAHLGA G +H Y +G + L SLI MY++CG++ A EVF M
Sbjct: 214 TFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSM 273
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
E++VV+W+AMISG NG+G A+E F M+R G+ P+ TF VLSAC+H GLV+EG
Sbjct: 274 KERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGR 333
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+ M +++ ++P + H+ C+VD+LGRAGLLD+AY I + +P IW +LGAC++
Sbjct: 334 RVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKM 393
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
HK+ LG +V EH + + YV+L N+Y+ G ++V+ +R+ M K L+ G S
Sbjct: 394 HKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYS 453
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
TI L + F + D SH NEIY LD++ ++ + AGYV S +H L EE+ AL
Sbjct: 454 TIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYAL 513
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
YHSEKLAIAFG+L T GT IR+ KNLR+C DCH+ K +S + NRE+I+RD+LRFHHF
Sbjct: 514 GYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHF 573
Query: 495 REGRCSCNDYW 505
+ G CSC DYW
Sbjct: 574 KNGSCSCLDYW 584
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 137/318 (43%), Gaps = 44/318 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA V+ GY L+T L++L ++F +P D+ + LI +
Sbjct: 30 QVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFH 89
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
L+ S P + T V+++CA L AL G IH ++ +G+GS + +
Sbjct: 90 NF-SVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYV 148
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+L++ Y KCG L A +VF M ++ VV+W++MISG NG ++AI F M+ GV
Sbjct: 149 QTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGV 208
Query: 231 FPDDQTFTGVLSACSH-----------------------------------CGLVDEGMM 255
P+ TF VLSAC+H CG V +
Sbjct: 209 EPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKARE 268
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
D M + N+ + ++ G G QA +L M G+ P+S + +L AC
Sbjct: 269 VFDSMKER-----NVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSAC 323
Query: 313 RIHKHVTLGERVIEHLIE 330
V G RV E + E
Sbjct: 324 AHAGLVNEGRRVFESMRE 341
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 19/269 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +E LF++M++ + N + C + + G +H + +G
Sbjct: 183 MISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNG 242
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ L T+L+++Y+ +A ++FD + +R+ VAW +IS Y N A+ LF
Sbjct: 243 LDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-------HRYISEHGYGSKMNLCNS 173
+ R +G P+ +T + VL ACAH G + G ++ +R + E + ++C
Sbjct: 303 EMRR--NGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPE----VEHHVC-- 354
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
L+ M + G L A+ K + E+ + W+AM+ M H + + A R P
Sbjct: 355 LVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKM--HKNFGLGAQVAEHRLASEP 412
Query: 233 DDQTFTGVLSAC-SHCGLVDEGMMFLDRM 260
+ +LS + G +D+ M D M
Sbjct: 413 GNPAHYVILSNIYALAGRMDQVEMVRDNM 441
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 48/277 (17%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P L+LQA L L ++H ++ GYG L L+ + GS+ ++
Sbjct: 10 PHSPAYNLLLQAGPRLKLLH---QVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66
Query: 191 FKGMPEKDVVSWSAMI-SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC-- 247
F +P D ++++I S + ++ + M + V P + TFT V+ +C+
Sbjct: 67 FLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVA 126
Query: 248 ---GLVDEGMMFLDRMSKDF-------------GILPN------------IHHYGCVVDL 279
G + G + ++ D G+L N + + ++
Sbjct: 127 LRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISG 186
Query: 280 LGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
+ G +A +L M GV+P+S + ++L AC LG ++ + A +
Sbjct: 187 YEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSAC-----AHLGAFILGCWVHEYAVGN 241
Query: 337 G---DYVL---LLNLYSSVGDWEKVKELREFMNEKGL 367
G + VL L+N+Y+ G+ K +E+ + M E+ +
Sbjct: 242 GLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 278
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 304/495 (61%), Gaps = 5/495 (1%)
Query: 12 EEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
+E +LF+ M K P N F +F +K C +L G QIHA++LR G+ + ++
Sbjct: 73 KEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSS 132
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L++ YS E+ A K+FDEI +R+ V W+ ++S Y R +AL +F + + G +
Sbjct: 133 LVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREM--QVVGIE 190
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD+V+ + VL ACA +GAL+ G+ +H YI + + L +LI MY+KCG + A E+
Sbjct: 191 PDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREI 250
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M KD +WS+MI GLA++G DA+ F M+ A P+ TF G+LSAC+H GLV
Sbjct: 251 FDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLV 310
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+G + M + GI P++ HYGC+VDLL R GL+D+AY + PD IWRTLL
Sbjct: 311 SDGKRYWSSML-ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLV 368
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
A ++ + E V L+EL+ ++ +Y++L NLY+SV EKV +R+ M E G++
Sbjct: 369 AYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKAL 428
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
PGC++I + G VH FV D SHP EI + L ++ ++ I+GY ++ LH + EEK
Sbjct: 429 PGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTLRDVALKILISGYKPFVSVVLHLVNDEEK 488
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
N L HSE+LAIA+G++ T TIR+ KNLR+C DCH K++S +Y+RE+I+RDR+R
Sbjct: 489 ENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVRDRVR 548
Query: 491 FHHFREGRCSCNDYW 505
FH F G CSC DYW
Sbjct: 549 FHKFVNGTCSCKDYW 563
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y+ E +F +M+ I + + + C +L G +HA + +
Sbjct: 164 MVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRM 223
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+D +L T L+++Y+ +A ++FDE+ +D+ AW+ +I + DAL +F
Sbjct: 224 IHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFS 283
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ EE+ KP+ VT + +L ACAH G + G++ + E G M ++ + +
Sbjct: 284 RM--EEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPSMEHYGCMVDLLCR 341
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
G + A++ +P D V W ++ N
Sbjct: 342 GGLIDEAYDFALIIPTPDPVIWRTLLVAYTKN 373
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/491 (40%), Positives = 299/491 (60%), Gaps = 2/491 (0%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
F++F ++ + P + ++ I+ C L G IH L+ G + TL+D+
Sbjct: 136 FWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDM 195
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
Y+ + +A ++F ++ +RD W V+I + ++L FD + + G PD V
Sbjct: 196 YARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQ--GIVPDKV 253
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
+ V+ ACA LGA+ + IH YI+ GY + L ++I MY+KCGS+ A +F M
Sbjct: 254 ALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRM 313
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
++V++WSAMI+ +G G A+E F M R+G+ P+ TF +L ACSH GL++EG
Sbjct: 314 QVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQ 373
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
F M ++G+ P++ HY C+VDLLGRAG LD+A ++I M V+ D +W LLGACRI
Sbjct: 374 RFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRI 433
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
H+H+ L ERV L++L++Q+ G YVLL N+Y++ G WE + + R+ M + GL+ PG +
Sbjct: 434 HRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRT 493
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
I + +++F V D +HPR NEIY+ML + ++L++AGY + L+++ E K L
Sbjct: 494 WIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLL 553
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
HSEKLAIAFG+L P G IR+ KNLR+C DCH F K +S + + +I+RD RFHHF
Sbjct: 554 YSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHF 613
Query: 495 REGRCSCNDYW 505
+EG CSC DYW
Sbjct: 614 KEGVCSCRDYW 624
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A + S P E F++MR + I + A + C K ++ IHA + G
Sbjct: 223 MIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTG 282
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y LD L T ++D+Y+ A +FD + R+ + W+ +I+ Y + + AL LF
Sbjct: 283 YSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFP 342
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ R SG P+ +T + +L AC+H G +E G++ + E+G + ++ +
Sbjct: 343 MMLR--SGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLG 400
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A E+ +GMP EKD V W A++ ++ H
Sbjct: 401 RAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRH 436
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
++H I+ +G + + N L+ MY + G+L A E+F GM ++ SWS ++ G A
Sbjct: 70 RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGIL 267
G+ F + R+G DD + V+ AC CG + + + D+G
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITL--KCGLDYG-- 185
Query: 268 PNIHHYGC--VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
H+ C +VD+ R +++ A+Q+ M K D W ++GA
Sbjct: 186 ----HFVCATLVDMYARCKVVEDAHQIFVKMW-KRDLATWTVMIGA 226
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 277/422 (65%), Gaps = 2/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD RD +W+ +IS Y + + +++AL L+ + +G PD ++ + VL AC
Sbjct: 166 AREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMR--VAGVAPDCISMVSVLSAC 223
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ +GAL G ++HR++ + M L +L+ MY+KCG + + +VF MP KDV++WS
Sbjct: 224 SAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWS 283
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MI GLA +G G DA+ F M G+ P++ TF GVL AC+H GLV++G + MS
Sbjct: 284 SMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDV 343
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G++P + HYGC+VDLLGRAG +++A +LI SM KPD IWRTLLGACRIHK+V + E
Sbjct: 344 HGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEE 403
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
+ L L G YVLL N+Y+ WE V E+R+ + + +Q PG S+I + VH
Sbjct: 404 AMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVH 463
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
EFV D SHPRI EIY+ML+E+ +L+ AGY + L ++ + K AL+ HSEKLAI
Sbjct: 464 EFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAI 523
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG+L TP +T+R+ KNLR C DCH+ K++S Y+R++I+RDR RFHHF EG+CSC D
Sbjct: 524 AFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKD 583
Query: 504 YW 505
YW
Sbjct: 584 YW 585
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 46/264 (17%)
Query: 49 GLQIHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACK--LFDEIPQRDTVAWNVLISC 105
G +HAR LR G+ D + T L+++Y+ A FDE P+RD NV+++
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAA 125
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y+ +A +FD ++ G
Sbjct: 126 YVARGEVAEARKVFDGMS-----------------------------------------G 144
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ N++I Y+ G +GMA E+F G ++D SWS+MIS A ++A+E + M
Sbjct: 145 RDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREM 204
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+ AGV PD + VLSACS G + G + R + + ++ +VD+ + G
Sbjct: 205 RVAGVAPDCISMVSVLSACSAMGALAIGAE-VHRFVESNRVEVDMKLGTALVDMYAKCGD 263
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
++ + ++ +M VK D W +++
Sbjct: 264 IENSLKVFHAMPVK-DVLTWSSMI 286
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ +E L+ +MR + + + + C +L G ++H V +
Sbjct: 184 MISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNR 243
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D +L T L+D+Y+ + K+F +P +D + W+ +I + DAL LF
Sbjct: 244 VEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFS 303
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ + G +P+++T + VL AC H+G + G+K +S+ HG +M ++ +
Sbjct: 304 EMISQ--GLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLG 361
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMI 206
+ G + A E+ + M K D + W ++
Sbjct: 362 RAGHVEEAMELIRSMTFKPDPIIWRTLL 389
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/461 (43%), Positives = 294/461 (63%), Gaps = 13/461 (2%)
Query: 56 VLRDGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
VL DG Q D ++ T ++ Y+ +A LFD +P +D + WN ++ Y ++ R
Sbjct: 182 VLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPS 241
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMN--L 170
+AL LF + R SG +PD+V+ +L L A A LG E G +H +++ ++N +
Sbjct: 242 EALRLFRRMLR--SGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARV 299
Query: 171 CNSLIAMYSKCGSLGMAFEVFK--GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+LI MY KCGSL A VF G ++D+V+W+AM++G AM+GH R+A+ +FG ++
Sbjct: 300 GTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQ 359
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G++P D TF GVL+ACSH GLVDEG M++++GI P + HYGC+VDLLGRAG +++
Sbjct: 360 GLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEE 419
Query: 289 AYQLITSMG-VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
A++L+ SM KPD+ +W +LL ACR+HK++ LG+R+ +HL+ SG YVLL N+Y+
Sbjct: 420 AFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYA 479
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
+ G+W +V +R M G+Q PGCS + + V EFV D SHPR EIY L+E+N
Sbjct: 480 AAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNG 539
Query: 408 QLKIAGYVAEI---TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ G+V +L + K AL+ HSEKLA+AFG+++TPPGT I++ KNLR
Sbjct: 540 MARARGHVPRTELVLHDLDDDDTAAKEQALAVHSEKLALAFGLISTPPGTAIKIVKNLRA 599
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH K++S V R+++ RDR RFHHF +G C+C DYW
Sbjct: 600 CADCHAVLKLVSEVTGRKIVFRDRNRFHHFVDGSCTCGDYW 640
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 132/358 (36%), Gaps = 47/358 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
++HA +R G D + L Y+ + A L P V + I +
Sbjct: 48 ELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRG 107
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
AL L + G P T L AC G L G +H Y + + +
Sbjct: 108 LHHAALALLSEMLLSH-GLLPTAHTLSASLPAC---GGLAVGRALHGYAVKLALSGEPYV 163
Query: 171 CNSLIAM--------------------------------YSKCGSLGMAFEVFKGMPEKD 198
+L+ M Y+K G L A +F G+P KD
Sbjct: 164 ATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKD 223
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
++ W+AM+ G +G +A+ F M R+GV PD+ + LSA + G + G
Sbjct: 224 LICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHS 283
Query: 259 RMSKDFG--ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV-KPDSTIWRTLLGACRIH 315
++ + N ++D+ + G L+ A + +G D W ++ +H
Sbjct: 284 FVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMH 343
Query: 316 KHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVKEL-REFMNEKGLQ 368
H + +L+AQ ++ +LN S G ++ +EL R E G++
Sbjct: 344 GH---SREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIE 398
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/505 (41%), Positives = 301/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ S + +E + L +M Q+ N + C +L ++H L G
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAG 260
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD ++ T L+ +Y+ +A +FD + RD V+WNV+I + + R +A LF
Sbjct: 261 LELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLF- 319
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + GCKPD + L +L ACA GALE+ +KIHR+ + G + + +L+ MYSK
Sbjct: 320 -LQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSK 378
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A VF M ++VVSW+AMISGLA +G G+DA+E F M GV PD TF V
Sbjct: 379 SGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAV 438
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG M++ +GI P++ H C+VDLLGRAG L +A I +M V P
Sbjct: 439 LSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDP 498
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D W LLG+CR + +V LGE V + ++L + + YVLL N+Y+ G W+ V +R
Sbjct: 499 DEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRT 558
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+G++ PG S I + +H+F+V D SHP EI + D++ +++K GY+ +
Sbjct: 559 MMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRL 618
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N ++K + HSEKLAI +G++ TPPG IRV KNLR+C DCH K++S V
Sbjct: 619 VLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEG 678
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 679 REIIVRDANRFHHFKDGVCSCGDYW 703
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 189/366 (51%), Gaps = 11/366 (3%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
+++ E + Q+ + T+ F +K C+K LM Q+H +++ + ++ +
Sbjct: 6 ANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
M L+ +Y + EA +FD + ++ +WN +I+ Y+ ++ DA+ LF + E
Sbjct: 66 MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHE-- 123
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G +P+ T +++L+ACA L AL++G+++H I G S + + +L+ MY KCGS+ A
Sbjct: 124 GVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEA 183
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+F + D++SW+ MI A +G+G++A M++ G P+ T+ +L+AC+
Sbjct: 184 RRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASE 243
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
G + + + + R + D G+ ++ +V + ++G +D A + M V+ D W
Sbjct: 244 GAL-KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNV 301
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVKELREFMN 363
++GA H G + ++++ + ++ ++ +LN +S G E VK++
Sbjct: 302 MIGAFAEHGR---GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHAL 358
Query: 364 EKGLQT 369
+ GL+
Sbjct: 359 DSGLEV 364
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 162/326 (49%), Gaps = 7/326 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E+ LF +M + + N +K C +L G ++HA + G
Sbjct: 100 MIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ T L+ +Y EA ++FD + D ++W V+I Y ++ ++A L
Sbjct: 160 LESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLM- 218
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E+ G KP+ +T + +L ACA GAL++ +++HR+ + G + + +L+ MY+K
Sbjct: 219 -LQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A VF M +DVVSW+ MI A +G G +A + F MQ G PD F +
Sbjct: 278 SGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSI 337
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+AC+ G + E + + R + D G+ ++ +V + ++G +D A + M V+
Sbjct: 338 LNACASAGAL-EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR- 395
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIE 326
+ W ++ H LG+ +E
Sbjct: 396 NVVSWNAMISGLAQH---GLGQDALE 418
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/505 (40%), Positives = 307/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LF++M + I ++ S AI C +L G QIHA+ G
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + L+ LY+ ++ +A F++I +D ++WN LIS + ++ +AL +F
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS 606
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+N ++G + + T + A A+ ++ G++IH + + GY S+ N LI +YSK
Sbjct: 607 QMN--QAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSK 664
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F MPEK+VVSW+AMI+G + +G+G +A+ F M++ G+ P+ TF GV
Sbjct: 665 CGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGV 724
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV+EG+ + MSK+ G++P HY CVVDLLGRA LL A + I M ++P
Sbjct: 725 LSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEP 784
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ IWRTLL AC +HK++ +GE HL+EL+ ++S YVLL N+Y+ G W+ R+
Sbjct: 785 DAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQ 844
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I +K +H F V D HP +IY+ +D++N++ GYV + +
Sbjct: 845 MMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYN 904
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+++ E+K HSEKLA+AFG+L+ IRV KNLR+C DCHN+ K +S + N
Sbjct: 905 LLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISN 964
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF G CSC DYW
Sbjct: 965 RAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 171/374 (45%), Gaps = 41/374 (10%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M ++ I N + + C SL+ ++HAR+ + G+ + L + L+D+Y +
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
A KLFD+IP + WN +IS + + L LF + E PD+ T VL
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITE--NVTPDESTFASVL 118
Query: 141 QACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
+AC+ A + E+IH I HG+GS +CN LI +YSK G + +A VF+ + KD
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF--- 256
VSW AMISGL+ NG +AI F M ++ V P F+ VLSAC+ L G
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 257 ---------------LDRMSKDFG-------ILPNIHH-----YGCVVDLLGRAGLLDQA 289
L + +G I +H Y ++ L + G D+A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 290 YQLITSMGV---KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LL 343
QL M + KPD +LL AC G+++ ++I++ S D ++ LL
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGM--SSDLIIEGSLL 356
Query: 344 NLYSSVGDWEKVKE 357
+LY D E E
Sbjct: 357 DLYVKCFDIETAHE 370
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 184/377 (48%), Gaps = 14/377 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + E +++F +M+ + + N + ++ C +L G QIH +V++ G
Sbjct: 386 MLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSG 445
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q + + + L+D+Y+ + A + + + D V+W +I+ Y ++ +AL LF
Sbjct: 446 FQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQ 505
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH--RYISEHGYGSKMNLCNSLIAMY 178
+ E G + D++ + ACA + AL G++IH YIS GY +++ N+L+++Y
Sbjct: 506 EM--ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYIS--GYSEDLSIGNALVSLY 561
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
++CG A+ F+ + KD +SW+A+ISG A +GH +A++ F M +AGV + TF
Sbjct: 562 ARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFG 621
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+SA ++ + +G M K G ++ L + G ++ A + M
Sbjct: 622 SAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFFEM-- 678
Query: 299 KPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDW-EK 354
P+ + W ++ H + + + E + +L + +V +L+ S VG E
Sbjct: 679 -PEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEG 737
Query: 355 VKELREFMNEKGLQTTP 371
+ R E GL P
Sbjct: 738 LSYFRSMSKEHGLVPKP 754
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 151/316 (47%), Gaps = 6/316 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ S + +E LF +M + + P+ S + C K G Q+H +++ G
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+ LYS + A ++F ++ +RD +++N LIS + + AL LF+
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303
Query: 121 NLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + C KPD VT +L ACA +GA G+++H Y+ + G S + + SL+ +Y
Sbjct: 304 KMQLD---CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KC + A E F ++VV W+ M+ G+ ++ F MQ G+ P+ T+
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L C+ G +D G ++ K G N++ ++D+ + G LD A ++ + +
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-E 478
Query: 300 PDSTIWRTLLGACRIH 315
D W ++ H
Sbjct: 479 EDVVSWTAMIAGYTQH 494
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 14/303 (4%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+ LFEKM+ + + + + C + G Q+H+ V++ G D + +L
Sbjct: 296 DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL 355
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+DLY A + F + V WNV++ Y + ++ +F L + G P
Sbjct: 356 LDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF--LQMQIEGLMP 413
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ T +L+ C LGAL+ GE+IH + + G+ + +C+ LI MY+K G L A +
Sbjct: 414 NQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGIL 473
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ + E+DVVSW+AMI+G + +A++ F M+ G+ D+ F+ +SAC+ ++
Sbjct: 474 QRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALN 533
Query: 252 EGMM-----FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
+G ++ S+D I +V L R G AY + K D+ W
Sbjct: 534 QGQQIHAQSYISGYSEDLSI------GNALVSLYARCGRAQDAYLAFEKIDAK-DNISWN 586
Query: 307 TLL 309
L+
Sbjct: 587 ALI 589
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 303/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AY+ + P E +F +MR+ + + A + L G IHA V++ G
Sbjct: 193 IVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMG 252
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +L +Y+ + A LFD++ + + WN +IS Y +N +DA+ LF
Sbjct: 253 LETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFH 312
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ +PD ++ + ACA +G+LE + Y+S Y + + ++LI M++K
Sbjct: 313 EMINKD--VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAK 370
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF ++DVV WSAMI G ++G R+AI + AM+R GV P+D TF G+
Sbjct: 371 CGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGL 430
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H G+V EG F +RM+ D I P HY C++DLLGRAG LDQAY++I M V+P
Sbjct: 431 LIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
T+W LL AC+ H+HV LG+ + L + +G YV L NLY++ W++V E+R
Sbjct: 490 GVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKGL GCS + ++G + F V D SHPR EI + ++ I +LK G+VA +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EE L HSE++ IA+G+++TP GTT+R+ KNLR CV+CH K++S +
Sbjct: 610 SLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVG 669
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS ++ ++ ++ KM+ R+ + F +K C L G +HA+V R G
Sbjct: 90 IIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLG 149
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALCL 118
++ D + L+ LY+ + A +F+ +P+R V+W ++S Y +N +AL +
Sbjct: 150 FEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEI 209
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + + KPD V + VL A L LE G IH + + G ++ +L SL MY
Sbjct: 210 FSQMRKMD--VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMY 267
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +F M +++ W+AMISG A NG +DAI+ F M V PD + T
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISIT 327
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+SAC+ G +++ ++D ++ ++D+ + G ++ A + +
Sbjct: 328 SAISACAQVGSLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT-L 385
Query: 299 KPDSTIWRTLLGACRIH 315
D +W ++ +H
Sbjct: 386 DRDVVVWSAMIVGYGLH 402
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 137/302 (45%), Gaps = 47/302 (15%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHAR+L G Q L+T L+ S++ A ++FD++P+ WN +I Y RN
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+DAL ++ + + + PD T +L+AC L L+ G +H + G+ + + +
Sbjct: 99 HFQDALLMYSKM--QLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFV 156
Query: 171 CNSLIAMYSKCGSLGMAFEVFKG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
N LIA+Y+KC LG A VF+G +PE+ +VSW+A++S A NG +A+E F M++
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216
Query: 229 GVFPDDQTFTGVLSACS-----------------------------------HCGLVDEG 253
V PD VL+A + CG V
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLG 310
+ D+M PN+ + ++ + G A L M V+PD+ + +
Sbjct: 277 KILFDKMKS-----PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAIS 331
Query: 311 AC 312
AC
Sbjct: 332 AC 333
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 9/261 (3%)
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+A CL SG D L+ + H L +IH + G L
Sbjct: 3 EASCLASPFLYTNSGIHSDSFYASLI-DSSTHKAQLR---QIHARLLVLGLQFSGFLITK 58
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
LI S G + A +VF +P V W+A+I G + N H +DA+ + MQ A V PD
Sbjct: 59 LIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPD 118
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
TF +L AC + G F+ G ++ ++ L + L A +
Sbjct: 119 SFTFPHLLKACGGLSHLQMG-RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVF 177
Query: 294 TSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDYVLLLNLYSSVG 350
+ + P+ TI W ++ A + + + ++ + + V +LN ++ +
Sbjct: 178 EGLPL-PERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQ 236
Query: 351 DWEKVKELREFMNEKGLQTTP 371
D E+ + + + + GL+T P
Sbjct: 237 DLEQGRSIHASVMKMGLETEP 257
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 307/505 (60%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y + E +L+ +M ++ + ++ F K C S+ G+QIH + + G
Sbjct: 56 MIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRG 115
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+++Y K +C +F+ + +RD +W+ +I+ + + L +F
Sbjct: 116 LEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFG 175
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++RE S C+P++ + VL AC HLGAL+ G H + + + + SLI MY K
Sbjct: 176 EMSREGS-CRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVK 234
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +F+ M +K+ +S+S MI+GLAM+G G +A++ F M G+ PDD + GV
Sbjct: 235 CGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGV 294
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GLVDEG+ +RM + GI P I HYGC+V L+GRAG+L++A + I SM +KP
Sbjct: 295 LSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKP 354
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR LL AC+ H ++ +GE + L EL + GDYV+L N+Y+ WE V ++R
Sbjct: 355 NEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRT 414
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG TPG S + ++ +++FV D+SHP+ +Y+M+ ++ QLK GY + +
Sbjct: 415 EMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQ 474
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK L HS+KLA+AF ++ T G IR+A+NLR+C DCH + K++S +Y
Sbjct: 475 VLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQ 534
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RDR RFHHF++G CSC DYW
Sbjct: 535 REITVRDRNRFHHFKDGTCSCRDYW 559
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S GS+ A +F+ + + ++ MI G + +A+ + M GV D+ T+
Sbjct: 30 SDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYP 89
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+ AC+ ++EGM + K G+ ++ ++++ G+ G ++ + + M
Sbjct: 90 ALFKACASLRSIEEGMQIHGYIFKR-GLEGDLFVQNSLINMYGKCGKIELSCSVFEHMD- 147
Query: 299 KPDSTIWRTLLGACRIHKHVTLG 321
+ D W ++ A H +LG
Sbjct: 148 RRDVASWSAIIAA-----HASLG 165
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/452 (42%), Positives = 293/452 (64%), Gaps = 3/452 (0%)
Query: 56 VLRD--GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
++RD G + + L ++D Y+ A +LFD + QR V+WNV+IS Y +N +
Sbjct: 188 LVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK 247
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+A+ +F + + P+ VT + VL A + LG LE G+ +H Y ++ L ++
Sbjct: 248 EAIEIFHRM-MQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSA 306
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+ MY+KCGS+ A +VF+ +P+ +V++W+A+I GLAM+G D M++ G+ P
Sbjct: 307 LVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPS 366
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
D T+ +LSACSH GLVDEG F + M G+ P I HYGC+VDLLGRAG L++A +LI
Sbjct: 367 DVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELI 426
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWE 353
+M +KPD IW+ LLGA ++HK++ +G R E L+++ +SG YV L N+Y+S G+W+
Sbjct: 427 LNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWD 486
Query: 354 KVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG 413
V +R M + ++ PGCS I + GV+HEF+V+D SH R +I+ ML+EI+ +L + G
Sbjct: 487 GVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEG 546
Query: 414 YVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
++ + T L + + K + L YHSEK+A+AFG+++TPP T + + KNLRIC DCH+ K
Sbjct: 547 HMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMK 606
Query: 474 VLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++S +Y R+++IRDR RFHHF G CSC DYW
Sbjct: 607 LISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 55/327 (16%)
Query: 41 MKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYST--FEKSFEACKLFDEIPQRDTV 97
+K C M L Q+HA +++ G D+ + T ++ L +T F A +FD++P+R+
Sbjct: 22 IKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCF 81
Query: 98 AWNVLISCYIRNQ-RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
AWN +I Q R DAL +F + E+ +P+ T VL+ACA + L G+++H
Sbjct: 82 AWNTVIRALAETQDRHLDALLVFCQM-LSEATVEPNQFTFPSVLKACAVMARLAEGKQVH 140
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGS--------------------------------- 183
+ + G + +L+ MY CGS
Sbjct: 141 GLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVV 200
Query: 184 --------------LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
L A E+F M ++ VVSW+ MISG A NG ++AIE F M + G
Sbjct: 201 LCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMG 260
Query: 230 -VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
V P+ T VL A S G+++ G K+ + ++ +VD+ + G +++
Sbjct: 261 DVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLG-SALVDMYAKCGSIEK 319
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIH 315
A Q+ + + + W ++G +H
Sbjct: 320 AIQVFERLP-QNNVITWNAVIGGLAMH 345
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + +E +F +M Q + N + + L G +H ++
Sbjct: 236 MISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKN 295
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
++D L + L+D+Y+ +A ++F+ +PQ + + WN +I + + D +F
Sbjct: 296 KIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKAND---IF 352
Query: 120 DNLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAM 177
+ L+R E+ G P DVT + +L AC+H G ++ G + ++ G K+ ++ +
Sbjct: 353 NYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDL 412
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMN 212
+ G L A E+ MP K D V W A++ M+
Sbjct: 413 LGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMH 448
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 305/537 (56%), Gaps = 34/537 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + EE LF +M+ + + A+ C + ++ G +H ++ G
Sbjct: 241 MVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDE------------------------------ 90
+ L L+ LYS+ + +A ++FD+
Sbjct: 301 VEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLF 360
Query: 91 --IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
+P++D V+W+ +IS Y +++ +AL LF + + G +PD+ + + AC HL
Sbjct: 361 YSMPEKDVVSWSAMISGYAQHECFSEALALFQEM--QLHGVRPDETALVSAISACTHLAT 418
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L+ G+ IH YIS + + L +LI MY KCG + A EVF M EK V +W+A+I G
Sbjct: 419 LDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILG 478
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LAMNG ++ F M++ G P++ TF GVL AC H GLV++G + + M + I
Sbjct: 479 LAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA 538
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
NI HYGC+VDLLGRAGLL +A +LI SM + PD W LLGACR H+ +GER+ L
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
I+L+ G +VLL N+Y+S G+W V E+R M + G+ TPGCS I G VHEF+
Sbjct: 599 IQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAG 658
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
D +HP+IN+I MLD + +LKI GYV + ++ EEK AL HSEKLA+AFG++
Sbjct: 659 DKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLI 718
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
P T IRV KNLRIC DCH K++S ++R++++RDR RFHHF+ G CSC D+W
Sbjct: 719 TISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 165/400 (41%), Gaps = 99/400 (24%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
+ +SP + ++ + + ++CC S G Q+HA + G+ D
Sbjct: 82 LQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVY 141
Query: 67 LMTTLMDLYST----------FEKSF---------------------EACKLFDEIPQRD 95
+ TLM+LY+ FE+S EA ++F+ +P+R+
Sbjct: 142 VRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERN 201
Query: 96 TVA---------------------------------WNVLISCYIRNQRTRDALCLFDNL 122
T+A W+ ++SCY +N+ +AL LF +
Sbjct: 202 TIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLF--V 259
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS--- 179
+ SG D+V + L AC+ + +E G +H + G ++L N+LI +YS
Sbjct: 260 EMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCG 319
Query: 180 -----------------------------KCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
+CGS+ A +F MPEKDVVSWSAMISG A
Sbjct: 320 EIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYA 379
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+ +A+ F MQ GV PD+ +SAC+H +D G +S++ + N+
Sbjct: 380 QHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRN-KLQVNV 438
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
++D+ + G ++ A ++ +M K ST +LG
Sbjct: 439 ILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILG 478
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYS---TFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
Q+ ++ + G D + L++ S T + ++F+ + +T WN ++ ++
Sbjct: 21 QLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHL 80
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
Q + L L S KPD T ++LQ CA + G ++H + G+
Sbjct: 81 YLQNSPHQALLHYKLFLA-SHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGD 139
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + N+L+ +Y+ CGS+G A VF+ P D+VSW+ +++G G +A F M
Sbjct: 140 VYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM 197
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/437 (44%), Positives = 278/437 (63%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+D+Y+ A +F+++ +D ++W L++ + N +AL LF + G
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI--MG 63
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
PD + VL ACA L LEFG+++H + G GS +++ NSL++MY+KCG + A
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+VF M +DV++W+A+I G A NG GR+++ + M +GV PD TF G+L ACSH G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LV+ G + M + +GI P HY C++DLLGR+G L +A +L+ M V+PD+T+W+ L
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACR+H +V LGER +L EL+ + + YVLL NLYS+ G WE+ + R M +G+
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PGCS I + VH F+ +D SHPR EIY +DEI +K AGYV ++ LH++ E
Sbjct: 304 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEE 363
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
K L+YHSEKLA+AFG+L PPG IR+ KNLRIC DCH K +SGV++R VI+RD
Sbjct: 364 GKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 423
Query: 489 LRFHHFREGRCSCNDYW 505
FHHFREG CSC+DYW
Sbjct: 424 NCFHHFREGACSCSDYW 440
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
+ S EE LF +MR I + + + C + L G Q+HA L+ G +
Sbjct: 46 NGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSV 105
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+L+ +Y+ +A K+FD + +D + W LI Y +N R R++L ++B+ S
Sbjct: 106 DNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMI--AS 163
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGM 186
G KPD +T + +L AC+H G +E G + + E +G +I + + G L
Sbjct: 164 GVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLME 223
Query: 187 AFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
A E+ M + D W A+++ ++G+
Sbjct: 224 AKELLNQMAVQPDATVWKALLAACRVHGN 252
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 327/572 (57%), Gaps = 71/572 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R + S +P+ F +MR++ P + F+ +F +K + SL G+Q+H + +
Sbjct: 76 LIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVH 135
Query: 60 GYQLDSQLM--TTLMDLYS----------TFEKSFE-----------AC----------- 85
G LD+ L TTL+ +YS FE+ FE AC
Sbjct: 136 G--LDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADM 193
Query: 86 ------------------------------KLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
KLF E+P +D V+W+ +I + N +A
Sbjct: 194 MFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEA 253
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
F L ++ G +P++V+ L ACA GA+EFG+ +H +I + G+ +++ N+L+
Sbjct: 254 FGFFREL--QQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALL 311
Query: 176 AMYSKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
YSKCG++GMA VF+ MPEK +VSW++MI+GLAM+G+G +AI+ F M+ +G+ PD
Sbjct: 312 DTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDG 371
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
F +L ACSH GL+++G + +M + I P I HYGC+VDL GRAG LD+AY+ I
Sbjct: 372 IAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFII 431
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
M V P + IWRTLLGAC IH +V L ERV E L EL SGD+VLL N+Y+ G W+
Sbjct: 432 HMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKD 491
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG- 413
V +R M ++ + TPG S I + +++ FV +V + E Y+ L EI +L++ G
Sbjct: 492 VAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGC 551
Query: 414 YVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
Y+ E+ S LH++ EEK +++S HSEKLA+AFG+ G+ IR+ KNLR+C DCH K
Sbjct: 552 YIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMK 611
Query: 474 VLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++S VY E+++RDR RFH F+ G CSC DYW
Sbjct: 612 LISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 44/267 (16%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLM--DLYSTFEKSFEACKLFDEIPQRDTVAWNVL 102
SL Q+HA V + G D + L+ S + A +LF P D N L
Sbjct: 17 SLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTL 76
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
I + +++L F + R + D + +L+A A +LE G ++H H
Sbjct: 77 IRGLAESDTPQNSLITFVEMRRRLTA-PLDSFSFAFLLKAAASYRSLESGIQLHCQAIVH 135
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G + + + +L++MYS+CG + A +VF+ M E +VV+W+A
Sbjct: 136 GLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNA------------------ 177
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
V++AC CG V M +RM N+ + ++ +
Sbjct: 178 -----------------VVTACFRCGDVKGADMMFNRMP-----FRNLTSWNVMLAGYTK 215
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLL 309
AG L+ A +L M VK D + W T++
Sbjct: 216 AGELELARKLFLEMPVKDDVS-WSTMI 241
>gi|255547387|ref|XP_002514751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546355|gb|EEF47857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 335
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/264 (70%), Positives = 222/264 (84%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAYSMSSSP EGFYL+++MRQK + +P + SF IKC +K SLMGG+Q+HAR+LRDG
Sbjct: 1 MIRAYSMSSSPIEGFYLYQEMRQKGLRADPLSLSFVIKCFVKVSSLMGGVQVHARLLRDG 60
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q DS L+T LMDLYS EK EAC++FDEIPQRDTVAWNVLISC+IRNQRTRD L LFD
Sbjct: 61 FQSDSLLLTNLMDLYSFCEKGTEACRVFDEIPQRDTVAWNVLISCFIRNQRTRDVLGLFD 120
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E GC+PDDVTCLL++QAC++LGALEFGEK+H YI H YG K NLCNSLI MYS+
Sbjct: 121 DMVSGEFGCEPDDVTCLLLVQACSNLGALEFGEKVHLYIQGHRYGDKTNLCNSLITMYSR 180
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A+ VFK MP K+VV+WSAMISG AMNG+GR AIE+FG MQR GV PDDQTFTGV
Sbjct: 181 CGCLDKAYGVFKNMPNKNVVTWSAMISGFAMNGYGRQAIETFGKMQRIGVLPDDQTFTGV 240
Query: 241 LSACSHCGLVDEGMMFLDRMSKDF 264
LSACSHCGLVDEGM+F D+M+++F
Sbjct: 241 LSACSHCGLVDEGMLFFDKMTQEF 264
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
+ G + D ++ V++ + +L G ++H + G+ S L +L+ +YS C
Sbjct: 23 QKGLRADPLSLSFVIKCFVKVSSLMGGVQVHARLLRDGFQSDSLLLTNLMDLYSFCEKGT 82
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVLSA 243
A VF +P++D V+W+ +IS N RD + F M G PDD T ++ A
Sbjct: 83 EACRVFDEIPQRDTVAWNVLISCFIRNQRTRDVLGLFDDMVSGEFGCEPDDVTCLLLVQA 142
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYG-------CVVDLLGRAGLLDQAYQLITSM 296
CS+ G ++ G + + H YG ++ + R G LD+AY + +M
Sbjct: 143 CSNLGALEFG--------EKVHLYIQGHRYGDKTNLCNSLITMYSRCGCLDKAYGVFKNM 194
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
K + W ++ ++ + G + IE +++
Sbjct: 195 PNK-NVVTWSAMISGFAMNGY---GRQAIETFGKMQ 226
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/486 (42%), Positives = 297/486 (61%), Gaps = 4/486 (0%)
Query: 20 KMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
KM + + F F +K C + L GL +H+ + + G+ D + L+ Y
Sbjct: 77 KMAMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCG 133
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A K+F+E+P+RD V+W+ +I+C+ +N +AL LF + + KPD+V L V
Sbjct: 134 FLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGT-VKPDEVIVLSV 192
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
+ A + LG LE G+ I +IS +G ++L +L+ M+S+CG + + VF M E++V
Sbjct: 193 VSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNV 252
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
++W+A+I+GLA++G +A+ F M+ G PD TFTGVL ACSH GLV EG +
Sbjct: 253 LTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFES 312
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
+ ++G+ P HYGC+VDLLGRAGLL++A + + M ++P+S IWRTLLGAC H ++
Sbjct: 313 IRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIE 372
Query: 320 LGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
L E+V E + EL + GDYVLL N+Y VG W + +R M EK + PGCS I +
Sbjct: 373 LAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVN 432
Query: 380 GVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSE 439
++HEFV D +HP+ I + L + LK+ GY +I++ L ++ EEK + L YHSE
Sbjct: 433 HLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSE 492
Query: 440 KLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRC 499
KLA+AF +L TIRV KNLRIC DCH F K S V+ RE+IIRDR RFHHF +G C
Sbjct: 493 KLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSC 552
Query: 500 SCNDYW 505
SC DYW
Sbjct: 553 SCRDYW 558
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 303/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AY+ + P E +F MR+ + + A + L G IHA V++ G
Sbjct: 193 IVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ L+ +L +Y+ + A LFD++ + + WN +IS Y +N R+A+ +F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ +PD ++ + ACA +G+LE ++ Y+ Y + + ++LI M++K
Sbjct: 313 EMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF ++DVV WSAMI G ++G R+AI + AM+R GV P+D TF G+
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H G+V EG F + M+ D I P HY CV+DLLGRAG LDQAY++I M V+P
Sbjct: 431 LMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
T+W LL AC+ H+HV LGE + L + +G YV L NLY++ W++V E+R
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKGL GCS + ++G + F V D SHPR EI + ++ I +LK G+VA +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EE L HSE++AIA+G+++TP GT +R+ KNLR CV+CH K++S + +
Sbjct: 610 SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVD 669
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 6/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS ++ ++ ++ M+ R+ + F +K C L G +HA+V R G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ D + L+ LY+ + A +F+ +P+R V+W ++S Y +N +AL +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F ++ + + KPD V + VL A L L+ G IH + + G + +L SL MY
Sbjct: 210 FSHMRKMD--VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +F M +++ W+AMISG A NG+ R+AI+ F M V PD + T
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+SAC+ G +++ + + + ++ ++D+ + G ++ A +L+ +
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTL 385
Query: 299 KPDSTIWRTLLGACRIH 315
D +W ++ +H
Sbjct: 386 DRDVVVWSAMIVGYGLH 402
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 140/302 (46%), Gaps = 47/302 (15%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHAR+L G Q L+T L+ S+F A ++FD++P+ WN +I Y RN
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+DAL ++ N+ + + PD T +L+AC+ L L+ G +H + G+ + + +
Sbjct: 99 HFQDALLMYSNM--QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 171 CNSLIAMYSKCGSLGMAFEVFKG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
N LIA+Y+KC LG A VF+G +PE+ +VSW+A++S A NG +A+E F M++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216
Query: 229 GVFPDDQTFTGVLSACS-----------------------------------HCGLVDEG 253
V PD VL+A + CG V
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLG 310
+ D+M PN+ + ++ + G +A + M V+PD+ + +
Sbjct: 277 KILFDKMKS-----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 311 AC 312
AC
Sbjct: 332 AC 333
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 13/263 (4%)
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+A CL L SG D L+ + H L+ +IH + G L
Sbjct: 3 EASCLASPLLYTNSGIHSDSFYASLI-DSATHKAQLK---QIHARLLVLGLQFSGFLITK 58
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
LI S G + A +VF +P + W+A+I G + N H +DA+ + MQ A V PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
TF +L ACS + G F+ G ++ ++ L + L A +
Sbjct: 119 SFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 294 TSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL---LNLYSS 348
+ + P+ TI W ++ A + + H+ ++ + D+V L LN ++
Sbjct: 178 EGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKP--DWVALVSVLNAFTC 234
Query: 349 VGDWEKVKELREFMNEKGLQTTP 371
+ D ++ + + + + GL+ P
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEP 257
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 304/538 (56%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY+ E + M + F F +K ++ S+ G +H +LR G
Sbjct: 142 MIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIG 201
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI----------------------------- 91
Q D + T+L+ LY + +A K+FD +
Sbjct: 202 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 261
Query: 92 --PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
P R+ V+W +IS Y ++ + AL LFD + +E+SG +P+ VT + VL ACA L L
Sbjct: 262 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 321
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMIS 207
E G +IH G S ++ +L AMY+KCGSL A F + EK++++W+ MI+
Sbjct: 322 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMIT 381
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
A GHG A+ +F M +AG+ PDD TFTG+LS CSH GLVD G+ + + MS + I
Sbjct: 382 AYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSIN 441
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + HY CV DLLGRAG L +A +L+ M + +IW +LL ACR H+++ + E
Sbjct: 442 PRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARK 501
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L L+ + +G+YVLL N+Y+ G W++V +LR + +G + +PGCS I + G H F+
Sbjct: 502 LFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLG 561
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHP+ EIY L+ + +++K AGY + + LH++ EEK L HSEKLA+AFG+
Sbjct: 562 GDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGI 621
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L TP T +RV KNLRIC DCH +S +Y REVI+RD RFHHF+ G CSC DYW
Sbjct: 622 LNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 10/260 (3%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+HA +L G Q + + + ++ Y++ + +F+ I + ++ +N +I Y R
Sbjct: 89 GHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYAR 148
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + +++ G D T VL++ L ++ G+ +H I G +
Sbjct: 149 YGFAERTVATYFSMH--SWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDL 206
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ SLI +Y KCG + A +VF M +DV SW+A+++G +G A+ F M
Sbjct: 207 YVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWR 266
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLD 287
+ ++T ++S S GL + + D M K D G+ PN V+ + L+
Sbjct: 267 NIV----SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 322
Query: 288 ---QAYQLITSMGVKPDSTI 304
Q ++L MG+ ++++
Sbjct: 323 RGRQIHELACRMGLNSNASV 342
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 24/191 (12%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P ++ V Q L L+ G ++H ++ G + + ++A Y+ G + + V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA------- 243
F G+ E + +++MI A G + ++ +M G D TF VL +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 244 ----CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
C H ++ G+ F +++ ++ L G+ G ++ A ++ +M ++
Sbjct: 188 WMGKCVHGLILRIGLQF------------DLYVATSLIILYGKCGEINDAGKVFDNMTIR 235
Query: 300 PDSTIWRTLLG 310
D + W LL
Sbjct: 236 -DVSSWNALLA 245
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 303/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + L EKM+Q + N + ++ C +L G ++H +++ G
Sbjct: 269 LIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSG 328
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + ++ L+ +Y EA KLF ++P RD V W +++ Y + +A+ LF
Sbjct: 329 YGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFR 388
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ G KPD +T L +C+ L+ G+ IH+ + GY + L ++L++MY+K
Sbjct: 389 RM--QQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAK 446
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M E++VV+W+AMI+G A +G R+A+E F M++ G+ PD TFT V
Sbjct: 447 CGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSV 506
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GLV+EG M D+GI P + HY C VDLLGRAG L++A +I +M +P
Sbjct: 507 LSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQP 566
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W LL ACRIH V GER E++++L + G YV L N+Y++ G +E +++R+
Sbjct: 567 GPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQ 626
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ + PG S I + G VH F V+D SHP EIY L ++ +Q+K GYV +
Sbjct: 627 VMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRF 686
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSE+LAI +G++ TPPGT IR+ KNLR+C DCH +K +S V
Sbjct: 687 VLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVG 746
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFHHF +G CSC D+W
Sbjct: 747 REIIARDAHRFHHFVDGVCSCGDFW 771
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 176/364 (48%), Gaps = 40/364 (10%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C + SL G ++HA +L+ G Q + L TL+ +Y+ +A ++FD I R+ V+W
Sbjct: 106 CARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSW 165
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+I ++ + +A ++ + +GCKPD VT + +L A + L+ G+K+H I
Sbjct: 166 TAMIEAFVAGNQNLEAYKCYETMKL--AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEI 223
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
++ G + + SL+ MY+KCG + A +F +PEK+VV+W+ +I+G A G A+
Sbjct: 224 AKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVAL 283
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVDEG------------MMF 256
E MQ+A V P+ T+T +L C+ H ++ G M+
Sbjct: 284 ELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMY 343
Query: 257 -----LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWR 306
L K FG LP ++ + +V + G D+A L M G+KPD +
Sbjct: 344 CKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFT 403
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMN 363
+ L +C + G+ + + L+ A S D L L+++Y+ G + + + M+
Sbjct: 404 SALTSCSSPAFLQEGKSIHQQLVH--AGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461
Query: 364 EKGL 367
E+ +
Sbjct: 462 ERNV 465
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
DT+A + +S + R ++AL + + + + + D LL Q CA L +LE G +
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLL--QECARLRSLEQGRE 117
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H I + G L N+L++MY+KCGSL A VF G+ ++++VSW+AMI
Sbjct: 118 VHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQ 177
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD----------- 263
+A + + M+ AG PD TF +L+A ++ L+ G ++K
Sbjct: 178 NLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTS 237
Query: 264 -----------------FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPD 301
F LP N+ + ++ + G +D A +L+ M V P+
Sbjct: 238 LVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPN 297
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIE 330
+ ++L C + G++V ++I+
Sbjct: 298 KITYTSILQGCTTPLALEHGKKVHRYIIQ 326
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 307/506 (60%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y + + E YL+ M Q+ + + F +K C + + G+QIH V + G
Sbjct: 103 MIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLG 162
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+++Y +C +F + Q+ +W+ +I+ + + L LF+
Sbjct: 163 LEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFE 222
Query: 121 NLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+++RE GC + ++ + VL AC HLGA G H + ++ + + SL+ MY
Sbjct: 223 DMSRE--GCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYV 280
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGSL +F+ M K+ +S+S +ISGL ++G+GR A++ F M G+ PDD T+
Sbjct: 281 KCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVS 340
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH GLVDEG+ D+M ++ I P + HYGC+VDL GRAGLL++A+QL+ SM +K
Sbjct: 341 VLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIK 400
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
+ +WR+LL AC++H ++ LGE E+L L + DY++L N+Y+ WE ++R
Sbjct: 401 ANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIR 460
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M +GL TPG S + +K V++FV D S+ + IY+M+ ++ QL+ GY+ + +
Sbjct: 461 TKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTS 520
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ ++ EEKG L HS+KLAIAF ++ T G+ IR+ +NLR+C DCH++ K++S +Y
Sbjct: 521 QVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIY 580
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RDR RFHHF++G CSC DYW
Sbjct: 581 EREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+LE +++H I + G +S++A S S+ A +F+ + E ++ M
Sbjct: 44 SLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTM 103
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I G N + +AI + M + V PD+ T+ VL AC+ ++ EGM + K G
Sbjct: 104 IRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFK-LG 162
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ +++ ++++ G+ ++ + + M K ++ W ++ A
Sbjct: 163 LEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVAS-WSAIIAA 207
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 304/509 (59%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC----MKFCSLMGGLQIHARV 56
+ RA +M+S E+ L+ +M IP+N F ++ +K C + C L G +IHA +
Sbjct: 146 IFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHI 205
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR GY+ +MTTL+D+Y+ F A +F +P ++ V+W+ +I+CY +N+ AL
Sbjct: 206 LRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKAL 265
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + E P+ +T + VLQACA L ALE G+ +H Y+ G S + + N+LI
Sbjct: 266 ELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLIT 325
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY +CG + VF M ++DV+SW+++IS M+G G+ AI+ F M GV P T
Sbjct: 326 MYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYIT 385
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+E + + M + I P + HY C+VD+LGRA LD+A +LI +M
Sbjct: 386 FITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNM 445
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
KP T+W +LLG+CRIH +V L ER L EL+ + +G+YVLL ++Y+ W V+
Sbjct: 446 DFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVR 505
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R+ + +GLQ P CS I +K ++ V + +P+I E+ L + ++K GYV
Sbjct: 506 RVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVP 565
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ ++L EEK + HS KLA+AFG++ T G IR++ NLR+C DCH F K +S
Sbjct: 566 QTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVS 625
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+++RD RFH F++G CSC DYW
Sbjct: 626 KFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 160/349 (45%), Gaps = 19/349 (5%)
Query: 29 NPFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
NP +F I C++ SL G+ +H R++ G D L T L+++Y ACK
Sbjct: 71 NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACK 130
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA-- 144
+FDE ++ WN + R D L L+ +N G + T VL+AC
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNW--IGIPSNRFTYTYVLKACVVS 188
Query: 145 --HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+ L G++IH +I HGY +++ +L+ +Y++ G + A VF MP+K++VSW
Sbjct: 189 ELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSW 248
Query: 203 SAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FL 257
SAMI+ A N A+E F M + P+ T VL AC+ ++ G + ++
Sbjct: 249 SAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYV 308
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
R D LP ++ ++ + GR G + ++ M K D W +L+ +H
Sbjct: 309 LRRGLD-STLPVLN---TLITMYGRCGEISTGQRVFDYMK-KRDVISWNSLISIYGMHGL 363
Query: 318 VTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEK 365
++ E++I S ++ +L S G E+ K L E M K
Sbjct: 364 GKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNK 412
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 23/257 (8%)
Query: 129 CKPDDV--TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
C+P+ T L++ +C +L G +H + G L LI MY GS+
Sbjct: 68 CEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDH 127
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A +VF EK + W+A+ LAM G D + +G M G+ + T+T VL AC
Sbjct: 128 ACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKAC-- 185
Query: 247 CGLVDEGMMFLDRMSKDF-------GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+V E + R K+ G ++H ++D+ R G + A + +M
Sbjct: 186 --VVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAM--- 240
Query: 300 PDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESG----DYVLLLNLYSSVGDWE 353
PD I W ++ AC + + + ++ L+A ++ V +L +S+ E
Sbjct: 241 PDKNIVSWSAMI-ACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALE 299
Query: 354 KVKELREFMNEKGLQTT 370
K + ++ +GL +T
Sbjct: 300 HGKLVHAYVLRRGLDST 316
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/507 (41%), Positives = 304/507 (59%), Gaps = 6/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RA + S ++ +M + P N F +FA+K C + G Q+HA+ LR
Sbjct: 146 LIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQ 204
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCL 118
G + + T L++LY+ E+ A +FD + ++ VAW+ ++S Y R +AL L
Sbjct: 205 GLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGL 264
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + G +PD+VT + V+ ACA GAL+ G+ +H YI G + L +LI MY
Sbjct: 265 FREM--QAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMY 322
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A VF M EKD +WSAMI G A++G DA+ F M V P++ TF
Sbjct: 323 AKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFI 382
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+H GLV++G + M ++ GI P++ +YGC+VDLL R+GLLD AY + M V
Sbjct: 383 GVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPV 441
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P+S IWRTLL AC+ + + E + L+EL+ +YVLL NLY+S W++V L
Sbjct: 442 SPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYL 501
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M K + G S+I + G +HEFVV D SHP I EI +L E+ +++ AG+
Sbjct: 502 RRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWT 561
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH++G EEK AL HSE+LAIA+G+L T IRV KNLR C+DCH AK++S
Sbjct: 562 AAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKA 621
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE+++RDR+RFH F G CSC D+W
Sbjct: 622 YNREIVVRDRVRFHKFMGGSCSCKDFW 648
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 12/289 (4%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD+IP +N LI + + AL ++ + R S +P+ T L+ACA +
Sbjct: 131 LFDQIPDPTAFCYNSLIRA-LPAAGSAPALAVYRRMLRAGSP-RPNSFTLAFALKACAAV 188
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAM 205
A G ++H G + + L+ +Y+KC + +A VF GM +K++V+WSAM
Sbjct: 189 PAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAM 248
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSK 262
+SG + G +A+ F MQ GV PD+ T V+SAC+ G +D G ++DR
Sbjct: 249 VSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK-- 306
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
GI ++ ++D+ + GL+++A + +M V+ D+ W ++ IH V
Sbjct: 307 --GITVDLELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIHGLVEDAL 363
Query: 323 RVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
+ ++ELK + + ++ +L+ + G E + M G++ +
Sbjct: 364 GLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPS 412
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/486 (42%), Positives = 296/486 (60%), Gaps = 4/486 (0%)
Query: 20 KMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
KM + + F F +K C + L GL +H+ + + G+ D + L+ Y
Sbjct: 77 KMTMAGVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCG 133
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A K F+E+P+RD V+W+ +I+C+ +N +AL LF + + KPD+V L V
Sbjct: 134 FLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGT-VKPDEVIVLSV 192
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
+ A + LG LE G+ I +IS +G ++L +L+ M+S+CG + + VF M E++V
Sbjct: 193 VSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNV 252
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
++W+A+I+GLA++G +A+ F M+ G PD TFTGVL ACSH GLV EG +
Sbjct: 253 LTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFES 312
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
+ ++G+ P HYGC+VDLLGRAGLL++A + + M ++P+S IWRTLLGAC H ++
Sbjct: 313 IRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIE 372
Query: 320 LGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
L E+V E + EL + GDYVLL N+Y VG W + +R M EK + PGCS I +
Sbjct: 373 LAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVN 432
Query: 380 GVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSE 439
++HEFV D +HP+ I + L + LK+ GY +I++ L ++ EEK + L YHSE
Sbjct: 433 HLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSE 492
Query: 440 KLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRC 499
KLA+AF +L TIRV KNLRIC DCH F K S V+ RE+IIRDR RFHHF +G C
Sbjct: 493 KLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSC 552
Query: 500 SCNDYW 505
SC DYW
Sbjct: 553 SCRDYW 558
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/507 (41%), Positives = 304/507 (59%), Gaps = 6/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RA + S ++ +M + P N F +FA+K C + G Q+HA+ LR
Sbjct: 97 LIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQ 155
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCL 118
G + + T L++LY+ E+ A +FD + ++ VAW+ ++S Y R +AL L
Sbjct: 156 GLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGL 215
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + G +PD+VT + V+ ACA GAL+ G+ +H YI G + L +LI MY
Sbjct: 216 FREM--QAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMY 273
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A VF M EKD +WSAMI G A++G DA+ F M V P++ TF
Sbjct: 274 AKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFI 333
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+H GLV++G + M ++ GI P++ +YGC+VDLL R+GLLD AY + M V
Sbjct: 334 GVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPV 392
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P+S IWRTLL AC+ + + E + L+EL+ +YVLL NLY+S W++V L
Sbjct: 393 SPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYL 452
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M K + G S+I + G +HEFVV D SHP I EI +L E+ +++ AG+
Sbjct: 453 RRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWT 512
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH++G EEK AL HSE+LAIA+G+L T IRV KNLR C+DCH AK++S
Sbjct: 513 AAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKA 572
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE+++RDR+RFH F G CSC D+W
Sbjct: 573 YNREIVVRDRVRFHKFMGGSCSCKDFW 599
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 12/289 (4%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD+IP +N LI + + AL ++ + R S +P+ T L+ACA +
Sbjct: 82 LFDQIPDPTAFCYNSLIRA-LPAAGSAPALAVYRRMLRAGSP-RPNSFTLAFALKACAAV 139
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAM 205
A G ++H G + + L+ +Y+KC + +A VF GM +K++V+WSAM
Sbjct: 140 PAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAM 199
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSK 262
+SG + G +A+ F MQ GV PD+ T V+SAC+ G +D G ++DR
Sbjct: 200 VSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK-- 257
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
GI ++ ++D+ + GL+++A + +M V+ D+ W ++ IH V
Sbjct: 258 --GITVDLELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIHGLVEDAL 314
Query: 323 RVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
+ ++ELK + + ++ +L+ + G E + M G++ +
Sbjct: 315 GLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPS 363
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/505 (40%), Positives = 307/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + E+ F LF M+++ I + + C +L +IH++V G
Sbjct: 331 MIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAG 390
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ +Y+ +A ++FD +P+RD V+W+ +I Y+ N +A F
Sbjct: 391 FGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFH 450
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R S +PD VT + +L AC HLGAL+ G +I+ + S + L N+LI M +K
Sbjct: 451 LMKR--SNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAK 508
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +F M +DV++W+AMI G +++G+ R+A+ F M + P+ TF GV
Sbjct: 509 HGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGV 568
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS G VDEG F + + GI+P + YGC+VDLLGRAG LD+A LI SM VKP
Sbjct: 569 LSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKP 628
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
S+IW +LL ACRIH ++ + ER E + + + YV L ++Y++ G WE V ++R+
Sbjct: 629 TSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRK 688
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ GC+ I + G VH FVV+D SHP + EIY L + +K GY+ +
Sbjct: 689 VMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQN 748
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++G ++K A+SYHSEKLAIA+GVL+ P GT IR+ KNLR+C DCH+ +K +S V
Sbjct: 749 VLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTG 808
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFHHF++G CSC DYW
Sbjct: 809 REIIARDASRFHHFKDGVCSCGDYW 833
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 4/311 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ +E F LF +M + + + + C L G ++HA+V+ G
Sbjct: 129 LIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAG 188
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ T L+ +Y +A ++FD + RD +NV++ Y ++ A LF
Sbjct: 189 FVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFY 248
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ G KP+ ++ L +L C AL +G+ +H G + + SLI MY+
Sbjct: 249 RM--QQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTT 306
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M +DVVSW+ MI G A NG+ DA F MQ G+ PD T+ +
Sbjct: 307 CGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHI 366
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
++AC+ ++ ++ G ++ +V + + G + A Q+ +M +
Sbjct: 367 MNACAISANLNHAREIHSQVDIA-GFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP-RR 424
Query: 301 DSTIWRTLLGA 311
D W ++GA
Sbjct: 425 DVVSWSAMIGA 435
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 35/299 (11%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+ +++ G QL+ + TL+ LYS EA ++FD + + V WN LI+ Y +
Sbjct: 76 GKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQ 135
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
++A LF + E G +P +T L VL AC+ L +G+++H + G+ S
Sbjct: 136 VGHVKEAFALFRQMVDE--GLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDF 193
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ +L++MY K GS+ A +VF G+ +DV +++ M+ G A +G A E F MQ+
Sbjct: 194 RIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQV 253
Query: 229 GVFPDDQTFTGVL----------------SACSHCGLVDE--------------GMMFLD 258
G+ P+ +F +L + C + GLVD+ G +
Sbjct: 254 GLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGA 313
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRI 314
R D + ++ + +++ G ++ A+ L +M G++PD + ++ AC I
Sbjct: 314 RRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAI 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
E G D T + + Q C L G+++ +I + G + N+LI +YS CG++
Sbjct: 50 EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A ++F + K VV+W+A+I+G A GH ++A F M G+ P TF VL ACS
Sbjct: 110 EARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
++ G ++ G + + +V + + G +D A Q+ + ++ ST
Sbjct: 170 SPAGLNWGKEVHAQVVTA-GFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVST-- 226
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ +++ Y+ GDWEK EL M +
Sbjct: 227 ---------------------------------FNVMVGGYAKSGDWEKAFELFYRMQQV 253
Query: 366 GLQ 368
GL+
Sbjct: 254 GLK 256
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/520 (41%), Positives = 310/520 (59%), Gaps = 21/520 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RAY+ SS+P + +F +M + P P F F IK + L G H V++
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQS-PDFPDKFTFPFLIKAASELEELFTGKAFHGMVIK 164
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D ++ +L+ Y+ + ++F P+RD V+WN +I+ +++ +AL L
Sbjct: 165 VLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALEL 224
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + E KP+ +T + VL ACA EFG +H YI + + L N+++ MY
Sbjct: 225 FQEM--ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMY 282
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMI------------SGLAMNGHGRDAIESFGAMQ 226
+KCGS+ A +F MPEKD+VSW+ M+ GLAM+GHG+DAI F MQ
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQ 342
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
V P+ TFT +L ACSH GLV+EG F ++M +G+LP + HY C+VD+LGRAGLL
Sbjct: 343 EDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLL 402
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLY 346
++A +LI M + P +++W LLGAC IH++V L E+ LIEL+ G YVLL N+Y
Sbjct: 403 EEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIY 462
Query: 347 SSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEIN 406
+ G W++V LR+ M + GL+ PGCS+I + G+VHEF+V D SHP +IY LDEI
Sbjct: 463 AKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIV 522
Query: 407 KQLKIAGYVAEITSELHNLGAEE--KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+L+ GYV S L L EE K AL HSEKLAIAFG+++T IR+ KNLR+
Sbjct: 523 ARLETIGYVPN-KSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRV 581
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
C DCH+ AK++S +Y+RE+++RDR+ + GR S D+
Sbjct: 582 CGDCHSVAKLVSKLYDREILLRDRV-WIVVDYGRISYEDF 620
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 9/263 (3%)
Query: 51 QIHARVLRDGYQLD----SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
QIHA++LR G D S+L+T S F A ++FD+IP + WN LI Y
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAA--LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAY 110
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
+ +L +F + +S PD T +++A + L L G+ H + + GS
Sbjct: 111 ASSSNPHQSLLIFLRM-LHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ + NSLI Y+KCG LG+ + VF P +DVVSW++MI+ G +A+E F M+
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
V P+ T GVLSAC+ + G + ++ I ++ ++D+ + G +
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN-RIXESLTLSNAMLDMYTKCGSV 288
Query: 287 DQAYQLITSMGVKPDSTIWRTLL 309
+ A +L M K D W T+L
Sbjct: 289 EDAKRLFDKMPEK-DIVSWTTML 310
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 309/509 (60%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMK----FCSLMGGLQIHARV 56
+ RA +++ + L+ +M + ++ F ++ +K C+ L G +IHA +
Sbjct: 141 LFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHI 200
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR GY +MTTLMD+Y+ F A +FDE+P ++ V+W+ +I+CY +N + +AL
Sbjct: 201 LRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEAL 260
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + P+ VT + VLQACA ALE G+ IH YI G S + + ++LI
Sbjct: 261 ELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALIT 320
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY++CG L +F M +KDVV W+++IS ++G+GR AI+ F M G P +
Sbjct: 321 MYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHIS 380
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+EG + M K+ GI P++ HY C+VDLLGRA LD+A ++I +
Sbjct: 381 FISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL 440
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++P +W +LLGACRIH HV L ER + L +L+ +G+YVLL ++Y+ W++VK
Sbjct: 441 RIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVK 500
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+++ ++ + LQ PG S I ++ ++ F D +P+ +++ +L ++ ++K GY
Sbjct: 501 RVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTP 560
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L++L EEK + HSEKLA+AFG++ T G TIR+ KNLR+C DCH+ K +S
Sbjct: 561 QTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFIS 620
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+++RD RFHHF++G CSC DYW
Sbjct: 621 KFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 15/242 (6%)
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
YST + S + P N LI + + AL L + ES P
Sbjct: 19 YSTSKLSVSSFSFNPSTPPNSNN--NHLIQSLCKQGNLKQALYLLSH----ESN--PTQQ 70
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
TC L++ + A +L +H+ + + G+ L LI M+S+ ++ A +VF
Sbjct: 71 TCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKT 130
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--SHC--GLV 250
++ + W+A+ LA+ G G D +E + M GV D T+T +L AC S C +
Sbjct: 131 RKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFL 190
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+G + + G ++H ++D+ R G + A + M VK + W ++
Sbjct: 191 QKGKEIHAHILRH-GYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK-NVVSWSAMI- 247
Query: 311 AC 312
AC
Sbjct: 248 AC 249
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/509 (41%), Positives = 319/509 (62%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMK---FCSLMG-GLQIHARV 56
+ RA S++ EE ++ +M IP++ F ++ +K C+ F SL+ G +IHA +
Sbjct: 142 LFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHI 201
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR GY +MTTL+D+Y+ F A +F+++P ++ V+W+ +I+CY +N + +AL
Sbjct: 202 LRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEAL 261
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF L E P+ VT + VLQACA L ALE G IH YI G S + + ++L+
Sbjct: 262 ELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVT 321
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY++CG L + VF M ++DVVSW+++IS ++G G+ AI F M GV P +
Sbjct: 322 MYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPIS 381
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLVDEG M + M GI P++ HY C+VDLLGRA L++A ++I +M
Sbjct: 382 FVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++P +W +LLG+CRIH +V L ER L +L+ +G+YVLL ++Y+ G W+ VK
Sbjct: 442 RIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVK 501
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+++ + +GLQ PG S I +K ++ FV D +PR+ +++ +L +++ +LK GYV
Sbjct: 502 RVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVP 561
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L++L A EK + HSEKLA+AFG++ + G IR+ K+LR+C DCH+F K +S
Sbjct: 562 QTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFIS 621
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
N+E+++RD RFHHFR+G CSC DYW
Sbjct: 622 KFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 109 NQRTRDALCLFDNLNR--EESGCKPDDV--TCLLVLQACAHLGALEFGEKIHRYISEHGY 164
N + +LC NL + E +P+ T L++ +C H +L +++HR++ E+G+
Sbjct: 42 NNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGF 101
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
L LI MYS S+ A +VF + + ++A+ L++ GHG + + +
Sbjct: 102 DQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRR 161
Query: 225 MQRAGVFPDDQTFTGVLSAC--SHC--GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
M G+ D T+T VL AC S C L+++G + + G +H +VD+
Sbjct: 162 MNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRH-GYDGYVHIMTTLVDMY 220
Query: 281 GRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ G + A + M VK + W ++
Sbjct: 221 AKFGCVSNASCVFNQMPVK-NVVSWSAMIA 249
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/498 (39%), Positives = 301/498 (60%), Gaps = 2/498 (0%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S EE +F +M ++ + + + C + L G +IHAR ++DG D +
Sbjct: 325 SGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF 384
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+++YS +A ++FD +P+RD V+W L+ Y + ++ F + ++
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ-- 442
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G + + +T + VL+AC++ AL++G++IH + + G + + + N+L++MY KCGS+ A
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
V +GM +DVV+W+ +I GLA NG G +A++ F M+ + P+ TF V+SAC
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
LV+EG M KD+GI+P HY C+VD+L RAG L +A +I +M KP + +W
Sbjct: 563 NLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGA 622
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL ACR H +V +GE+ E ++L+ Q +G YV L +Y++ G W V +LR+ M E+G+
Sbjct: 623 LLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PG S I + G VH FV D SHPR EIY L+ + KQ+K GYV + +H+L
Sbjct: 683 KKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQ 742
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E K A+ +HSEKLAIA+G+++TPP T IRV+KNLR+C DCH K +S + RE+I RD
Sbjct: 743 EGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARD 802
Query: 488 RLRFHHFREGRCSCNDYW 505
RFHHF+ G CSC DYW
Sbjct: 803 AHRFHHFKNGECSCGDYW 820
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 4/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ +E F LF M+Q+ + + F + C +L G ++H RV+ G
Sbjct: 116 MISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAG 175
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+ +Y+ +A ++FD + RD V+W L Y + +++L +
Sbjct: 176 LANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYH 235
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G +P +T + VL AC L ALE G++IH I E + S + + +L MY K
Sbjct: 236 AMLQE--GVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIK 293
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A EVF+ +P +DV++W+ MI GL +G +A F M + V PD T+ +
Sbjct: 294 CGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAI 353
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+ G + G R KD G++ ++ ++++ +AG + A Q+ M K
Sbjct: 354 LSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KR 411
Query: 301 DSTIWRTLLG 310
D W L+G
Sbjct: 412 DVVSWTALVG 421
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 44/400 (11%)
Query: 6 SMSSSPEEGFY----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
SM + +G+Y + + + QK + + ++ C+K L G Q+H +LR G
Sbjct: 16 SMIPTSTDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGM 75
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ + ++ TL+ LY EA +LFD+ + V+WNV+IS Y ++A LF
Sbjct: 76 KPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTL 135
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ +E G +PD T + +L AC+ AL +G ++H + E G + + N+LI+MY+KC
Sbjct: 136 MQQE--GLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKC 193
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
GS+ A VF M +D VSW+ + A +G+ +++++++ AM + GV P T+ VL
Sbjct: 194 GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVL 253
Query: 242 SACSHCGLVDEGMMF------------------LDRM------SKD----FGILPN--IH 271
SAC +++G L +M KD F LPN +
Sbjct: 254 SACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVI 313
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ ++ L +G L++A+ + M V PD + +L AC + G+ + H
Sbjct: 314 AWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEI--HA 371
Query: 329 IELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
+K D L+N+YS G + +++ + M ++
Sbjct: 372 RAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 411
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 6/228 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ E F F+KM Q+ + N +K C +L G +IHA V++ G
Sbjct: 419 LVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAG 478
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LM +Y +A ++ + + RD V WN LI +N R +AL F+
Sbjct: 479 IFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFE 538
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ EE +P+ T + V+ AC +E G + + ++G ++ + +
Sbjct: 539 VMKSEE--MRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILA 596
Query: 180 KCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGHGRDAIESFGAMQ 226
+ G LG A +V MP K + W A+++ A HG I A Q
Sbjct: 597 RAGHLGEAEDVILTMPFKPSAAMWGALLA--ACRAHGNVEIGEQAAEQ 642
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 299/515 (58%), Gaps = 24/515 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y +S E LF +M ++ +P N I C+ +L G +H L+ G
Sbjct: 123 LVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ + +Y A KLFDE+P + ++WN ++S Y +N + L L+
Sbjct: 183 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N++ +G PD VT + VL +CA+LGA G ++ I G+ S L N+LI MY++
Sbjct: 243 NMDM--NGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYAR 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A VF GMPE+ +VSW+A+I G M+GHG A++ F M R+G+ PD F V
Sbjct: 301 CGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCV 360
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL D+G+ + M +++ + P HY C+VDLLGRAG L +A LI SM +KP
Sbjct: 361 LSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKP 420
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IHK+V L E E +IEL+ + G YVLL N+YS+ + + V +R
Sbjct: 421 DGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRI 480
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK L+ PGCS + LKG VH F+V D +H + +EIY++L+E+ +
Sbjct: 481 MMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAII----------- 529
Query: 421 ELHNLGAEEKGN----------ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ G EK N + HSEKLA+AFG+L T G + + KNLRIC DCH
Sbjct: 530 -MQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHL 588
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
F K++S + +R++ +RD RFHHFR G CSC DYW
Sbjct: 589 FFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 177/365 (48%), Gaps = 12/365 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ L+ +M + N F FA+K C + G Q H ++ + G + + T L+
Sbjct: 32 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 73 DLYSTFEKSFEACKLFDEI--PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
+Y A K+F+E ++ TV +N L+S Y+ N + +A+ LF +N E G
Sbjct: 92 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEE--GVP 149
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+ VT L ++ AC LE G +H ++G+ S +++ N I MY KCGS+ A ++
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F MP K ++SW+AM+SG A NG + +E + M GV PD T GVLS+C++ G
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTL 308
G ++ G N ++++ R G L +A + M P+ T+ W +
Sbjct: 270 SVGHEVEFKIQAS-GFTSNPFLNNALINMYARCGNLTKAQAVFDGM---PERTLVSWTAI 325
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGD-YVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+G +H H + ++ + +I + G +V +L+ S G ++ E + M ++
Sbjct: 326 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMM-KRNY 384
Query: 368 QTTPG 372
Q PG
Sbjct: 385 QLEPG 389
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/500 (40%), Positives = 304/500 (60%), Gaps = 33/500 (6%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
++A + SP + LF ++RQ + + F CS ++ C+ L G +H V + G+
Sbjct: 100 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI-------------- 107
+ + L ++ LY++ + EA LF+++PQRD V WN++I+ I
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219
Query: 108 ---RNQRT--------------RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
RN R+ ++A+ LF + EE+G K ++VT + VL ACA LGAL+
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM--EEAGVKCNEVTVVAVLAACADLGALD 277
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G +IH Y + HG+ + + N+LI MY KCG L A +VF+ M E+ VVSWSAMI GLA
Sbjct: 278 LGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLA 337
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
M+G +A+ F M + G+ P+ TF G+L ACSH GL+ EG F M++D+GI+P I
Sbjct: 338 MHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQI 397
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HYGC+VDLL RAGLL +A++ I +M +KP+ +W LLGACR+HK+V + E I+HL+E
Sbjct: 398 EHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLE 457
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
L G YV+L N+Y+ G WE +R+FM ++ ++ TPG S+I + GVVHEFV +
Sbjct: 458 LDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEE 517
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLAT 450
SHP +I+Q +E+ +++++ GYV + L ++ EK +S HSEKLA+ FG++ T
Sbjct: 518 SHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNT 577
Query: 451 PPGTTIRVAKNLRICVDCHN 470
P T IR+ KNLRIC DCH+
Sbjct: 578 PAETPIRIMKNLRICEDCHS 597
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 55/390 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFD--EIPQRDTVAWNVLISCYI 107
Q+HA++++ L S L T + L F SF A ++F+ E + +T WN +
Sbjct: 46 QVHAQIIKTNAPL-SILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKALA 104
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
DA+ LF L R+ C PD TC VL+AC +L L G +H + + G+ S
Sbjct: 105 EGDSPIDAIMLFYRL-RQYDVC-PDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSN 162
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV--------------------------- 200
+ L N ++ +Y+ CG +G A +F+ MP++DVV
Sbjct: 163 LYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPE 222
Query: 201 ----SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
SW++MI+G G ++AI F M+ AGV ++ T VL+AC+ G +D GM
Sbjct: 223 RNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR- 281
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ S G N+ ++D+ + G L++A ++ M + + W ++G +H
Sbjct: 282 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS-WSAMIGGLAMHG 340
Query: 317 HVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFMNE--KGLQTTP-- 371
R+ + ++ + +G ++ LL+ S +G + E R F + P
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMG---LISEGRRFFASMTRDYGIIPQI 397
Query: 372 ---GC-----STIGLKGVVHEFVVDDVSHP 393
GC S GL HEF+++ P
Sbjct: 398 EHYGCMVDLLSRAGLLHEAHEFILNMPMKP 427
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E +LF KM + + N + C +L G++IH R G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++ TL+D+Y EACK+F+E+ +R V+W+ +I + R +AL LF
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+++ + G +P+ VT + +L AC+H+G + G + ++ ++G ++ ++ + S
Sbjct: 351 DMS--QVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLS 408
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A E MP K + V W A++
Sbjct: 409 RAGLLHEAHEFILNMPMKPNGVVWGALLGA 438
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/506 (39%), Positives = 289/506 (57%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E L+++M+ + + + C + G IH +LR G
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L LM++Y EA +F+ RD ++WN +I+ + ++ A LF
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQ 521
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ EE +PD++T VL C + ALE G++IH I+E G +NL N+LI MY +
Sbjct: 522 EMQNEE--LEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIR 579
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD-QTFTG 239
CGSL A VF + +DV+SW+AMI G A G AIE F MQ G P D TFT
Sbjct: 580 CGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTS 639
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSAC+H GLV EG M ++G+LP I HYGC+V LLGRA +A LI M
Sbjct: 640 ILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFP 699
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD+ +W TLLGACRIH ++ L E + ++L A+ Y+LL N+Y++ G W+ V ++R
Sbjct: 700 PDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIR 759
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M +G++ PG S I + ++HEF+ D SHP EIY L ++ +++ AGY +
Sbjct: 760 RVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQ 819
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH+LG + +L HSE+LAIA+G++ TPPGT IR+ KNLRIC DCH +K +S +
Sbjct: 820 HVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLV 879
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFH F+ G+CSC DYW
Sbjct: 880 GREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 179/368 (48%), Gaps = 42/368 (11%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C + L +IHA+++ G D L L+++Y +A ++F E+P+RD
Sbjct: 34 LQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDV 93
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++WN LISCY + + A LF+ + + +G P+ +T + +L AC LE G+KIH
Sbjct: 94 ISWNSLISCYAQQGFKKKAFQLFEEM--QNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I + GY + NSL++MY KCG L A +VF G+ +DVVS++ M+ A + +
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ + FG M G+ PD T+ +L A + ++DEG + +++ + G+ +I +
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNSDIRVGTAL 270
Query: 277 VDLLGRAGLLDQAYQ---------------LITSM-------------------GVKPDS 302
V + R G +D A Q LI ++ GV +
Sbjct: 271 VTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNR 330
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELR 359
T + ++L AC K + G+ + H+ E S D + L+++Y+ GD K +EL
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISE--DGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 360 EFMNEKGL 367
M ++ L
Sbjct: 389 YTMPKRDL 396
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 157/310 (50%), Gaps = 4/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ ++ F LFE+M+ N + C L G +IH+++++ G
Sbjct: 99 LISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG 158
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
YQ D ++ +L+ +Y A ++F I RD V++N ++ Y + ++ L LF
Sbjct: 159 YQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFG 218
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G PD VT + +L A L+ G++IH+ E G S + + +L+ M +
Sbjct: 219 QMSSE--GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + FKG+ ++DVV ++A+I+ LA +GH +A E + M+ GV + T+ +
Sbjct: 277 CGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSI 336
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACS ++ G + +S+D G ++ ++ + R G L +A +L +M K
Sbjct: 337 LNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTM-PKR 394
Query: 301 DSTIWRTLLG 310
D W ++
Sbjct: 395 DLISWNAIIA 404
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 13/373 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + +E LF +M + I + + L G +IH + +G
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D ++ T L+ + A + F I RD V +N LI+ ++ +A F+
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEA---FE 316
Query: 121 NLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
R S G + T L +L AC+ ALE G+ IH +ISE G+ S + + N+LI+MY+
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG L A E+F MP++D++SW+A+I+G A +A+ + MQ GV P TF
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSAC++ +G M + + + GI N H ++++ R G L +A + +
Sbjct: 437 LLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKV--- 355
D W +++ H ++ + E++ +E D + ++ S + E +
Sbjct: 496 -DVISWNSMIAGHAQHGSYETAYKLFQ---EMQNEELEPDNITFASVLSGCKNPEALELG 551
Query: 356 KELREFMNEKGLQ 368
K++ + E GLQ
Sbjct: 552 KQIHGRITESGLQ 564
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T + +LQ C L ++IH + E G G + L N LI MY KC S+ A +VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
K MP +DV+SW+++IS A G + A + F MQ AG P+ T+ +L+AC ++
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 252 EGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP-DSTIWRTLL 309
G ++ K + P + + ++ + G+ G L +A Q+ G+ P D + T+L
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFA--GISPRDVVSYNTML 201
Query: 310 GACRIHKHVT-----LGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
G +V G+ E + K Y+ LL+ +++ ++ K + + E
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVT----YINLLDAFTTPSMLDEGKRIHKLTVE 257
Query: 365 KGLQT 369
+GL +
Sbjct: 258 EGLNS 262
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/468 (43%), Positives = 299/468 (63%), Gaps = 9/468 (1%)
Query: 43 FCSLMGGLQIHARVL-RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNV 101
+CSL G L RVL G LD T++ Y A ++F +P+R+ V+W+
Sbjct: 123 YCSL-GLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWSA 181
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
++ +R +AL +FD + REE +PD V + VL+ACAHLGA+E G +HRY+
Sbjct: 182 MVDACVRAGEFGEALWVFDRMMREE--FRPDVVVLVSVLKACAHLGAVERGRWVHRYLET 239
Query: 162 HGYGSK---MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+G + + L +L+ MY KCG + A++VF G+ +DVV W+AMI GLAMNG+G A
Sbjct: 240 GSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERA 299
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+E F M + G P++ TF VL AC+H G VDEG M +D+GI P HYGC+ D
Sbjct: 300 LELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM-QDYGIKPQREHYGCLAD 358
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
LLGRAG +++A L+ M ++P ++ W L+ +C++H + +GERV + LIEL+ + G
Sbjct: 359 LLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGR 418
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEI 398
YV+L NLY+ G WE+ + +R+ M ++G + G S I L G+VHEF+ D HP +I
Sbjct: 419 YVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRKI 478
Query: 399 YQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVLATPPGTTIR 457
Y +L++I ++L++ GYV + + + ++ EE KG ALSYHSE+LA+AFG+L P G IR
Sbjct: 479 YALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPIR 538
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ KNLR+C DCH +K++S +Y RE+I+RDR RFH FR+G CSCNDYW
Sbjct: 539 IVKNLRVCRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/538 (40%), Positives = 311/538 (57%), Gaps = 34/538 (6%)
Query: 2 VRAYSMSSSPEEG-FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
V+A + + P +F +MR + + F ++ L G +HA++LR G
Sbjct: 35 VQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFG 94
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--------------------------- 93
+D + T+L+ +YS+ A ++FDEIPQ
Sbjct: 95 LAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFA 154
Query: 94 ----RDTVAWNVLISCYIRNQRTRDALCLFDNLNR-EESGCKPDDVTCLLVLQACAHLGA 148
R+ ++W+ +I+ Y+R + ++AL LF + + +P++ T VL AC LGA
Sbjct: 155 VMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGA 214
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMIS 207
LE G+ H YI + G + L +LI MY+KCGS+ A VF + P KDV++WSAMIS
Sbjct: 215 LEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMIS 274
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GLAM+G + + F M GV P+ TF V AC H GLV EG +L RM++D+ I+
Sbjct: 275 GLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSII 334
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P I HYGC+VDL GRAG + +A+ ++ SM ++PD +W LL R+H + E ++
Sbjct: 335 PTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKK 394
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
LIEL+ SG YVLL N+Y+ G WE V+ +R+ M G++ PGCS I + GV+HEF V
Sbjct: 395 LIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFV 454
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHP +I+ ML+EI ++LK+ GYV L +L E K ALS HSEKLA+A+G
Sbjct: 455 GDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGF 514
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L T PGT IR+ KNLRIC DCH K++S V++RE+I+RD RFHHF +G CSC DYW
Sbjct: 515 LKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 48/266 (18%)
Query: 92 PQRDTVAWNVLISCYIRNQR-----TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
P ++ WN LI +++ + T + +F + G +PD T +LQ+ A
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFH--GVQPDFHTFPFLLQSFASP 77
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG------------- 193
L G +H I G + SLI+MYS CG+LG A +VF
Sbjct: 78 SLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSII 137
Query: 194 ------------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG---VFP 232
MPE++V+SWS MI+G G ++A+ F MQ G V P
Sbjct: 138 NANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRP 197
Query: 233 DDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
++ T +GVL+AC G ++ G ++D+ G+ ++ ++D+ + G +++A
Sbjct: 198 NEFTMSGVLAACGRLGALEHGKWAHAYIDKC----GMPVDVVLGTALIDMYAKCGSVEKA 253
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIH 315
+ +++G D W ++ +H
Sbjct: 254 TWVFSNLGPNKDVMAWSAMISGLAMH 279
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ---KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+ Y +E LF +M+ + N F S + C + +L G HA +
Sbjct: 167 MINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYID 226
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDAL 116
+ G +D L T L+D+Y+ +A +F + P +D +AW+ +IS + + +
Sbjct: 227 KCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECV 286
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLI 175
LF + + G +P+ VT L V AC H G + G+ R ++E + + ++
Sbjct: 287 GLFSKMINQ--GVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMV 344
Query: 176 AMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+Y + G + A+ V K MP E DV+ W A++SG M+G
Sbjct: 345 DLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 383
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 303/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + E L+ +M + + F F +K C ++ G +IH V++ G
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTG 206
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+D+Y+ A ++FD+I RD V WN +++ Y +N L L
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCS 266
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G +P + T + + A A AL G ++H + S + +L+ MY+K
Sbjct: 267 EMVL--TGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAK 324
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A +F+ + K VVSW+AMI+G AM+GH +A++ F M R PD TF GV
Sbjct: 325 CGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAK-PDHITFVGV 383
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL++EG MF + M +D+ I P + HY C+VDLLG +G LD+AY LI M V P
Sbjct: 384 LSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLP 443
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +W LL +C+IH +V LGE +E LIEL+ ++G+YV+L N+Y+ G WE V +LR+
Sbjct: 444 DSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRK 503
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ L+ + CS I +K VH F+ D SHP +EIY L+ + +K AGY S
Sbjct: 504 LMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGS 563
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H++ +EK N + HSE+LAIAFG+++TPPGT + + KNLRIC DCH K +S +
Sbjct: 564 VFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITE 623
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD R+HHF++G CSC DYW
Sbjct: 624 REITVRDVNRYHHFKDGVCSCGDYW 648
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 151/314 (48%), Gaps = 4/314 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C+ ++ G Q+HA+V G+ D+ + T L++LY + A LFD IP+ +
Sbjct: 82 LQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNI 141
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
WNVLI Y N A+ L+ + + G PD+ T VL+ACA L A+E G +IH
Sbjct: 142 FLWNVLIRGYAWNGPYEAAVQLYYQMF--DYGLVPDNFTFPFVLKACAALSAIEHGREIH 199
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
++ + G+ + + +LI MY+KCG +G A EVF + +D V W++M++ + NGH
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPD 259
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ M G+ P + T +SA + + +G L +S + +
Sbjct: 260 ACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRE-LHGLSWRQEFESHDKVKTAL 318
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
VD+ + G + A L +GVK W ++ +H H T + E + + +
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDH 377
Query: 337 GDYVLLLNLYSSVG 350
+V +L+ S G
Sbjct: 378 ITFVGVLSACSHGG 391
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
NQ A+ N + E + P +LQ+C A++ G+++H + G+G
Sbjct: 51 NQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDT 110
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ L+ +Y C SL A +F +P+ ++ W+ +I G A NG A++ + M
Sbjct: 111 VIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDY 170
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ PD+ TF VL AC+ ++ G + + + G ++ ++D+ + G +
Sbjct: 171 GLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGS 229
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKH 317
A ++ + V+ D+ +W ++L A + H
Sbjct: 230 AREVFDKILVR-DAVLWNSMLAAYSQNGH 257
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/507 (40%), Positives = 307/507 (60%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ + E L+ +MR + + F F +K C ++ G +IH V+R G
Sbjct: 73 MIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSG 132
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD--ALCL 118
+ D + L+D+Y+ A ++FD+I +RD V WN +++ Y +N + + ALC
Sbjct: 133 LESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCR 192
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
N G KP + T ++ + A A G L G+++H Y HG+ S + +L+ MY
Sbjct: 193 VMAFN----GLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMY 248
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K GS+ +A +F+ + EK VVSW+AMI+G AM+GH +A++ F M + V PD TF
Sbjct: 249 AKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFV 307
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVL+ACSH GL++EG M M DF I P + HY C++DLLG G L++AY+LI M V
Sbjct: 308 GVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRV 367
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD+ +W LL +C+IH +V +GE +E L+EL+ + G+YV+L N+Y+ G W+ V L
Sbjct: 368 EPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARL 427
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M KGL+ + CS I + VH F+ +D SHP+ IY L K +K AGY ++
Sbjct: 428 RDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQV 487
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
S H++ +EK + +S HSE+LAIAFG+++T GT + + KNLRIC DCH K +S +
Sbjct: 488 GSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKI 547
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ IRD R+HHF++G CSC D+W
Sbjct: 548 TEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 17/372 (4%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C+ ++ G Q+HAR+ + G + L T L++LY A LFD I +R+
Sbjct: 8 LQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNL 67
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
WNV+I Y N A+ L+ + + G PD T VL+AC+ L A+E G+KIH
Sbjct: 68 FLWNVMIRGYAWNGPYELAISLYYQM--RDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ + G S + + +LI MY+KCG + A +VF + E+DVV W++M++ + NG
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+++ M G+ P + TF ++A + GL+ +G L S G N +
Sbjct: 186 ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKE-LHGYSWRHGFESNDKVKTAL 244
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
+D+ ++G ++ A L + K + W ++ +H H ++ E+K +
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVS-WNAMITGYAMHGHAN---EALDLFKEMKGKVL 300
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF--VVDDVSH-P 393
D++ + + ++ +NE + S + V + ++D + H
Sbjct: 301 PDHITFVGVLAACSH-------GGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCG 353
Query: 394 RINEIYQMLDEI 405
R+ E Y+++ E+
Sbjct: 354 RLEEAYKLIMEM 365
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+LQ+C A+E G+++H I + G L L+ +Y C SL A +F + +++
Sbjct: 7 LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+ W+ MI G A NG AI + M+ G+ PD TF VL ACS ++EG
Sbjct: 67 LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG----K 122
Query: 259 RMSKDF---GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
++ KD G+ ++ ++D+ + G ++ A Q+ + + D W ++L
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER-DVVCWNSMLA 176
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 291/487 (59%), Gaps = 19/487 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + LQ+HA ++R G D +LMTTL+D Y+ A ++F
Sbjct: 119 DALSLSFALKATARCSDAFATLQLHAILVRLGVAADVRLMTTLLDSYAKCGDLASARRVF 178
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------NREESGCKPDDVTCLLVL 140
DE+ RD WN L++ + AL LF L REE P++VT + L
Sbjct: 179 DEMSVRDVATWNALLAGLAQGTEPNLALVLFRRLAGSFRELPPREE----PNEVTVVAAL 234
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD-- 198
ACA LGAL+ G H + G + +CN+LI MYSKCGSL A EVF + +D
Sbjct: 235 SACAQLGALKDGLAAHDFARTIGAVGNVRVCNALIDMYSKCGSLSRALEVFHSIKLEDRT 294
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+VS++A I L+M+GHG DA++ F M A + PD+ T+ VL C+H GLVD+G D
Sbjct: 295 LVSYNATIQALSMHGHGEDALKLFDEMP-ARIEPDEVTYLAVLGGCNHAGLVDDGRRVFD 353
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M + PN+ HYG +VDLLGRAG L +A+ +I M D +W+TLLGA ++H +V
Sbjct: 354 SMR----VPPNMKHYGTIVDLLGRAGRLAEAHDMIMHMPFPADIVLWQTLLGAAKMHGNV 409
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L E L +L + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 410 DLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEI 469
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
GV+H+F+ D H R EIY+ LDEI ++ GY E ++ LH++G EEK ALSYHS
Sbjct: 470 DGVMHKFINGDKEHLRWREIYRALDEIGSKICELGYEPETSNVLHDIGEEEKQYALSYHS 529
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG+++TPPG TIRV KNLRIC DCH AK++S Y R +IIRDR RFH F +G+
Sbjct: 530 EKLAIAFGLISTPPGETIRVIKNLRICGDCHVVAKLISKAYGRVIIIRDRARFHQFEDGQ 589
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 590 CSCRDYW 596
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/536 (39%), Positives = 314/536 (58%), Gaps = 32/536 (5%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
V A+S +SS + +R++R+ N ++ +FA K C ++ G Q+ ++ G
Sbjct: 74 VLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGL 133
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ + + L+ +Y + +A K+FD P RD +WN+++S Y R + +A LFD
Sbjct: 134 ENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE 193
Query: 122 LNREE--------SGC---------------------KPDDVTCLLVLQACAHLGALEFG 152
+ ++ SGC P++ T L ACA+L AL+ G
Sbjct: 194 MPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQG 253
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLA 210
+H YI ++ L LI MY+KCG L A ++F P ++ V W+AMI G A
Sbjct: 254 RWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFA 313
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
++G ++AIE F M+ V P+ TF +L+ACSH V+EG + + M+ + + P +
Sbjct: 314 VHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPEL 373
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HYGC+VDLLGRAG L +A ++I+SM + PD IW LL AC+IHK +GERV + + E
Sbjct: 374 EHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKE 433
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
L G +VLL N+YS G+W + + LRE + E G + TPGCS+I L G+ H+F+V D
Sbjct: 434 LDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDR 493
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL-GAEEKGNALSYHSEKLAIAFGVLA 449
SHP+ ++Y LDE+ +LKIAGY+ E L ++ E++ AL HSEKLAIAFG++
Sbjct: 494 SHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMN 553
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T P T IR+ KNLR+C DCH K +S VY+RE+I+RDR+R+HHF++G CSCNDYW
Sbjct: 554 TTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 147/348 (42%), Gaps = 42/348 (12%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM-DLYSTFEKSFEACKLFDEI 91
C F + C F + Q+HAR++ G L L+ L S F A +FD
Sbjct: 4 CDFLLSSCKSFRQIK---QVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
Query: 92 PQRDTVAWNVLISCY-IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH-LGAL 149
PQ D +N +I + D+ F +L REE P+ + + C +G L
Sbjct: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREER-LVPNQYSFAFAFKGCGSGVGVL 119
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAM-------------------------------Y 178
E GE++ + + G + + + N+LI M Y
Sbjct: 120 E-GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGY 178
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
++ G + A ++F MPEKDVVSW+ MISG G+ +A++ F M G+ P++ T
Sbjct: 179 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLA 238
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG- 297
L+AC++ +D+G + K+ I N ++D+ + G L+ A +L S
Sbjct: 239 SSLAACANLVALDQGRWMHVYIKKN-NIQMNERLLAGLIDMYAKCGELEFASKLFNSNPR 297
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHL-IELKAQESGDYVLLLN 344
+K W ++G +H V E + IE + +V LLN
Sbjct: 298 LKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLN 345
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 308/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ +S+ E+ F LF M+++ I + I C L +IH++V+R G
Sbjct: 335 MIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG 394
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ +Y+ +A ++FD + +RD V+W+ +I Y+ N +A F
Sbjct: 395 FGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFH 454
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R + +PD VT + +L AC HLGAL+ G +I+ + S + + N+LI M K
Sbjct: 455 LMKR--NNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVK 512
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +F+ M ++DVV+W+ MI G +++G+ R+A++ F M + P+ TF GV
Sbjct: 513 HGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGV 572
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS G V+EG F + GI+P + YGC+VDLLGRAG LD+A LI M +KP
Sbjct: 573 LSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKP 632
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+S+IW TLL ACRI+ ++ + ER E + + + YV L ++Y++ G WE V ++R+
Sbjct: 633 NSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRK 692
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ GC+ I ++G +H FVV+D SHP+ EIY L + +K GY+ +
Sbjct: 693 VMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQN 752
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LHN+G +EK A+SYHSEKLAIA+GVL+ P G IR+ KNLR+C DCH+ +K +S V
Sbjct: 753 VLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTG 812
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFHHF+ G CSC DYW
Sbjct: 813 REIIARDASRFHHFKNGVCSCGDYW 837
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 10/352 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ +E F LF +M + + + + C L G + HA+V++ G
Sbjct: 133 IIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVG 192
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ T L+ +Y A ++FD + +RD +NV+I Y ++ A LF
Sbjct: 193 FVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFY 252
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G KP+ ++ L +L C+ AL +G+ +H G + + +LI MY
Sbjct: 253 RMQQE--GFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMG 310
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M +DVVSW+ MI G A N + DA F MQ G+ PD T+ +
Sbjct: 311 CGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHI 370
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
++AC+ + ++ + G ++ +V + + G + A Q+ +M +
Sbjct: 371 INACASSADLSLAREIHSQVVRA-GFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS-RR 428
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIE--HLIELKAQESGDYVLLLNLYSSVG 350
D W ++GA + GE E HL++ E D V +NL ++ G
Sbjct: 429 DVVSWSAMIGA---YVENGCGEEAFETFHLMKRNNVEP-DVVTYINLLNACG 476
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 168/362 (46%), Gaps = 40/362 (11%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
CM G Q+ +++ G QL+ + TL+ L+S EA + FD + + V W
Sbjct: 71 CMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTW 130
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N +I+ Y + ++A LF + E +P +T L+VL AC+ L+ G++ H +
Sbjct: 131 NAIIAGYAQLGHVKEAFALFRQMVDE--AMEPSIITFLIVLDACSSPAGLKLGKEFHAQV 188
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ G+ S + +L++MY K GS+ A +VF G+ ++DV +++ MI G A +G G A
Sbjct: 189 IKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAF 248
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACS----------------HCGLVDE----------- 252
+ F MQ+ G P+ +F +L CS + GLVD+
Sbjct: 249 QLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMY 308
Query: 253 ---GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWR 306
G + R D + ++ + ++ ++ A+ L +M G++PD +
Sbjct: 309 MGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYI 368
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMN 363
++ AC ++L + H ++A D ++ L+++Y+ G + +++ + M+
Sbjct: 369 HIINACASSADLSLAREI--HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS 426
Query: 364 EK 365
+
Sbjct: 427 RR 428
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T + + Q C L G+++ +I + G + N+LI ++S CG++ A + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ K VV+W+A+I+G A GH ++A F M + P TF VL ACS +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G F ++ K G + + +V + + G +D A Q+ + K D + + ++G
Sbjct: 180 LGKEFHAQVIK-VGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL-YKRDVSTFNVMIGG 237
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 294/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ + F LF +M+ S +K CM L G ++ A +L G
Sbjct: 659 MIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+LD+ + L+ YS +A K+FD++P RD ++WN +I+ Y +N AL
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAY 778
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G + + + +L AC+ ALE G+++H I + + + +LI+MY+K
Sbjct: 779 QM--QEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAK 836
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A EVF EK+VV+W+AMI+ A +G A++ F M + G+ PD TFT +
Sbjct: 837 CGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSI 896
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GLV EG + G+ P I HYGC+V LLGRAG +A LI M P
Sbjct: 897 LSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPP 956
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ +W TLLGACRIH +V L E + ++L A+ YVLL N+Y++ G W+ V ++R
Sbjct: 957 DAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRR 1016
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ PG S I + ++HEF+ D SHP EIY+ L ++ +++ AGY +
Sbjct: 1017 VMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQY 1076
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LHNL E + +L HSE+LAIA+G+L TPPGT IR+ KNLRIC DCH +K +S +
Sbjct: 1077 VLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVG 1136
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFH F+ G+CSC D+W
Sbjct: 1137 REIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 40/405 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E L+++M+ + + + C + G IH +LR G
Sbjct: 457 IIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSG 516
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L LM++Y EA +F+ RD ++WN +I+ + ++ A LF
Sbjct: 517 IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFL 576
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G +PD +T VL C + ALE G +IH I E G +NL N+LI MY +
Sbjct: 577 EMKKE--GLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIR 634
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A+EVF + ++V+SW+AMI G A G R A E F MQ G P TF+ +
Sbjct: 635 CGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSI 694
Query: 241 LSACSHCGLVDEGMMFLDRM----------------------------SKDFGILPN--I 270
L AC +DEG + + K F +PN I
Sbjct: 695 LKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDI 754
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ ++ + GL A Q M GV + + ++L AC + G+RV
Sbjct: 755 MSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAE 814
Query: 328 LIELKAQESGDY---VLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
+++ K Q GD L+++Y+ G E+ +E+ + EK + T
Sbjct: 815 IVKRKMQ--GDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVT 857
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 180/377 (47%), Gaps = 42/377 (11%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
TN A ++ C + SL +IHA+++ G D L L+++Y +A ++
Sbjct: 80 TNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQV 139
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F ++P+RD ++WN LISCY + + A LF+ + + +G P +T + +L AC
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM--QTAGFIPSKITYISILTACCSPA 197
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
LE+G+KIH I E GY + NSL+ MY KC L A +VF G+ +DVVS++ M+
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
A + + I FG M G+ PD T+ +L A + ++DEG + +++ + G+
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKR-IHKLAVNEGLN 316
Query: 268 PNIH-------------------------------HYGCVVDLLGRAGLLDQAYQLITSM 296
+I Y ++ L + G ++A++ M
Sbjct: 317 SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQM 376
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVG 350
GV + T + ++L AC K + GE + H+ E+ S D + L+++Y+ G
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG--HSSDVQIGNSLISMYARCG 434
Query: 351 DWEKVKELREFMNEKGL 367
D + +EL M ++ L
Sbjct: 435 DLPRARELFNTMPKRDL 451
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 181/395 (45%), Gaps = 42/395 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE LF +M + IP + + L G +IH + +G
Sbjct: 255 MLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEG 314
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D ++ T L ++ A + + RD V +N LI+ ++ +A +
Sbjct: 315 LNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYY 374
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G + T L VL AC+ AL GE IH +ISE G+ S + + NSLI+MY++
Sbjct: 375 QMRSD--GVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYAR 432
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A E+F MP++D++SW+A+I+G A +A++ + MQ GV P TF +
Sbjct: 433 CGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHL 492
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL-------------- 286
LSAC++ +G M + + + GI N H ++++ R G +
Sbjct: 493 LSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551
Query: 287 -----------------DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ AY+L M G++PD + ++L C+ + + LG ++
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI-- 609
Query: 327 HLIELKAQESGDYVL---LLNLYSSVGDWEKVKEL 358
H++ +++ D L L+N+Y G + E+
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 309/557 (55%), Gaps = 53/557 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV Y+ S + F LFE MR++ IP + S I
Sbjct: 331 MVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDG 390
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRD----------GYQLDSQLMT--TLMD 73
C +L G++IHA L+ G LM L+D
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALID 450
Query: 74 LYSTFEKSFEACK-LFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
+YS +SF+A + +FD IP +R+ V W V+I Y + + DAL +F + +
Sbjct: 451 MYSKC-RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVA 509
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY--GSKMNLCNSLIAMYSKCGSLGMAF 188
P+ T +L ACAHL AL G++IH Y++ H S + N LI MYSKCG + A
Sbjct: 510 PNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTAR 569
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF MP+++ VSW++M+SG M+G G++A++ F MQ+AG PDD +F +L ACSH G
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSG 629
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
+VD+G+ + D M +D+ ++ + HY CV+DLL R G LD+A++ I M ++P + IW L
Sbjct: 630 MVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVAL 689
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACR+H +V L E + L+ +KA+ G Y L+ N+Y++ W+ V +R+ M + G++
Sbjct: 690 LSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIK 749
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PGCS + K F V D SHP EIY +L+ + ++K+ GYV E LH++ E
Sbjct: 750 KRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDE 809
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK N LS HSEKLA+A+G+L T PG IR+ KNLR+C DCH+ +S + + E+I+RD
Sbjct: 810 EKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDS 869
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF+ G CSC YW
Sbjct: 870 SRFHHFKNGSCSCGGYW 886
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 22 RQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
R R T P F +A+K C + S G +H + +G++ + + L+ +YS
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198
Query: 80 KSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNLN----REESGCKPD 132
+A +FDEI ++ D ++WN +++ +++ R AL LF ++ + + + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
++ + +L ACA L AL ++IH Y +G + +CN+LI Y+KCGS+ A +VF
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M KDVVSW+AM++G +G+ A E F M++ + D T++ V++ + G E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ +M D G PN ++ G L Q ++
Sbjct: 379 ALDAFQQMILD-GSEPNSVTIISLLSACASLGALSQGMEI 417
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 25/218 (11%)
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ H Y S +L ++A Y CG+ A V + + V W+ ++ GH A
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSH-----CGLVDEGMMFLDRMSKDFGILPNIHHY 273
I M RAG PD T L AC CG G++ + G N+
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCN------GFESNVFVC 187
Query: 274 GCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
+V + R G L+ A + IT G+ D W +++ A H + +E E
Sbjct: 188 NALVAMYSRCGSLEDASLVFDEITRKGID-DVISWNSIVAA---HVKGSNPRTALELFSE 243
Query: 331 LK-------AQESGDYVLLLNLYSSVGDWEKVKELREF 361
+ E D + ++N+ + + + +++E
Sbjct: 244 MSMIVHEKATNERSDIISIVNILPACASLKALPQIKEI 281
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/513 (40%), Positives = 306/513 (59%), Gaps = 9/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++S S E F M + + + + + C L G +IHA VLR+
Sbjct: 185 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 244
Query: 61 YQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+++ + + L+D+Y + ++FD I R WN +IS Y RN AL LF
Sbjct: 245 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 304
Query: 120 DNLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ + +G P+ T V+ AC H L A+ G++IH Y + S + + ++L+ MY
Sbjct: 305 IEMIKV-AGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMY 363
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM----QRAG-VFPD 233
+KCG L ++ VF MP K+V++W+ +I M+G G +A+E F M R G P+
Sbjct: 364 AKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPN 423
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
+ TF V +ACSH GL+ EG+ RM D G+ P HY CVVDLLGRAG L++AY+L+
Sbjct: 424 EVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELV 483
Query: 294 TSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
+M + D W +LLGACRIH++V LGE ++L+ L+ + YVLL N+YSS G W
Sbjct: 484 NTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLW 543
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
K E+R+ M + G++ PGCS I + VH+F+ DVSHP+ +++ L+ ++++++
Sbjct: 544 NKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKE 603
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV + + LHN+ +EK N L HSEKLAIAFG+L TPPGTTIRVAKNLR+C DCH
Sbjct: 604 GYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAAT 663
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + RE+I+RD RFHHF+EG CSC DYW
Sbjct: 664 KFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 31/357 (8%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R+ + S+ E + +M + FA +K L G QIHA ++ GY
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 62 QLDSQLMTT---------------------LMDLYSTFEKSFEACKLFDEIPQRDTVAWN 100
S + LM +Y+ + ++ LF+ RD V+WN
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWN 183
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
+IS + ++ R +AL F + E G + D VT VL AC+HL L+ G++IH Y+
Sbjct: 184 TMISSFSQSDRFSEALAFFRLMVLE--GVELDGVTIASVLPACSHLERLDVGKEIHAYVL 241
Query: 161 EHGYGSKMNLCNS-LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ + + S L+ MY C + VF + + + W+AMISG A NG A+
Sbjct: 242 RNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKAL 301
Query: 220 ESFGAMQR-AGVFPDDQTFTGVLSACSHC-GLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
F M + AG+ P+ T V+ AC H + +G ++ + +I +V
Sbjct: 302 ILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LASDITVGSALV 360
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
D+ + G L+ + ++ M K + W L+ AC +H GE +E + A+
Sbjct: 361 DMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGK---GEEALELFKNMVAE 413
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 133/318 (41%), Gaps = 62/318 (19%)
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
P R T +W + R+ R+A+ + + SG +PD+ VL+A + L L+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTY--IEMTVSGARPDNFAFPAVLKAVSGLQDLKT 110
Query: 152 GEKIHRYISEHGYGSK-MNLCNSLIAMYSKCGSLG---------MAF-----------EV 190
GE+IH + GYGS + + N+L+ MY KCG +G MA +
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKAL 170
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F+ ++D+VSW+ MIS + + +A+ F M GV D T VL ACSH +
Sbjct: 171 FESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERL 230
Query: 251 DEGMMFLDRMSKDFGILPN-------------------------------IHHYGCVVDL 279
D G + ++ ++ N I + ++
Sbjct: 231 DVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISG 290
Query: 280 LGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
R GL ++A L M G+ P++T +++ AC +H + + H ++
Sbjct: 291 YARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC-VHSLAAIAKGKEIHAYAIRNML 349
Query: 336 SGDYVL---LLNLYSSVG 350
+ D + L+++Y+ G
Sbjct: 350 ASDITVGSALVDMYAKCG 367
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/505 (40%), Positives = 311/505 (61%), Gaps = 8/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + + +E LF E M + + + C + S+ G +H+ +
Sbjct: 192 MISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDH 251
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + +++ L+DLYS F + AC+LFD + +D ++WN LI Y ++AL LF
Sbjct: 252 GFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLF 311
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN---LCNSLIA 176
+ R SG P+DVT L +L ACAHLGA++ G IH YI++ G N L SLI
Sbjct: 312 QEMLR--SGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLID 369
Query: 177 MYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCG + A +VF M + + +W+AMISG AM+G A + F M+ G+ PDD
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF G+LSACSH G++D G M++ + I P + HYGC++DLLG +GL +A ++I +
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M ++PD IW +LL AC+IH ++ LGE + LI+++ SG YVLL N+Y++ G W +V
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEV 549
Query: 356 KELREFMNEKGL-QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
++R +N+KG+ + PGCS+I + VVHEF++ D HP+ EIY ML+E+ L+ AG+
Sbjct: 550 AKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGF 609
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
V + + L + E + AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K+
Sbjct: 610 VPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKL 669
Query: 475 LSGVYNREVIIRDRLRFHHFREGRC 499
+S +Y RE+I RDR RF HFR+G C
Sbjct: 670 ISKIYKREIIARDRTRFXHFRDGVC 694
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 34/348 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + + + F +K C K G QIH VL+ G
Sbjct: 60 MFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLG 119
Query: 61 YQLDSQLMTTLMDLYST------FEKSFE-------------------------ACKLFD 89
+ LD + T+L+ +Y+ K F+ A KLFD
Sbjct: 120 FDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFD 179
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y+ ++AL LF + + +PD+ T + V+ ACA ++
Sbjct: 180 EIPGKDVVSWNAMISGYVETGNYKEALELFKEM-MMMTNVRPDESTMVTVVSACAQSDSI 238
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G +H +I++HG+ S + + N+LI +YSK G + A E+F G+ KDV+SW+ +I G
Sbjct: 239 ELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGY 298
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-GILP 268
++A+ F M R+G P+D T +L AC+H G +D G ++K G++
Sbjct: 299 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVT 358
Query: 269 NIHHY-GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
N+ ++D+ + G +D A Q+ S + W ++ +H
Sbjct: 359 NVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH 406
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 164/367 (44%), Gaps = 55/367 (14%)
Query: 52 IHARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
IHA++++ G + ++ L++ + F+ A +FD I + + + WN + +
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ AL L+ L G PD T +L++CA + G++IH ++ + G+ +
Sbjct: 67 SSDPVSALKLY--LVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS------------------------- 203
+ SLI+MY++ G L A +VF +DVVS++
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184
Query: 204 ------AMISGLAMNGHGRDAIESFGA-MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
AMISG G+ ++A+E F M V PD+ T V+SAC+ ++ G
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG-RH 243
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ D G N+ ++DL + G ++ A +L + K D W TL+G +
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNK-DVISWNTLIGG---YT 299
Query: 317 HVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--------VGDWEKV---KELREFM-N 363
H+ L + + E L++ E+ + V +L++ + +G W V K+L+ + N
Sbjct: 300 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTN 359
Query: 364 EKGLQTT 370
LQT+
Sbjct: 360 VSSLQTS 366
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 308/505 (60%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R + + EE +++M ++ + + F +K C + ++ G+Q+HA +L+ G
Sbjct: 102 MMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLG 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+ +Y + C +F+++ +R +W+ LI+ + D L L
Sbjct: 162 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 221
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+++ E + ++ + VL AC HLGAL+ G +H ++ + G + + SLI MY K
Sbjct: 222 DMSNE-GYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLK 280
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL +F+ M +K+ +S+S MISGLAM+G+GR+ + F M G+ PDD + GV
Sbjct: 281 CGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGV 340
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG+ +RM + GI P I HYGC+VDL+GRAG +D+A +LI SM ++P
Sbjct: 341 LNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEP 400
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR+LL A ++H ++ GE + L +L +Q++ DYV+L N+Y+ WE V + R
Sbjct: 401 NDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRT 460
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KGL PG S + +K +H FV D HP+ +Y+ML ++ QLK GY + T
Sbjct: 461 NMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQ 520
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK LS HS+KLAIA+ ++ T G+ IR+ +NLR+C DCH + K++S +++
Sbjct: 521 VLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFD 580
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RDR RFHHF++G CSC DYW
Sbjct: 581 REITVRDRHRFHHFKDGACSCRDYW 605
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 122 LNREESGCKPD------DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
++RE+ P+ + C+ +L+ C+++ EF + R + +G N L+
Sbjct: 14 VSREDPPQSPELSFKLGEKECVSLLKKCSNME--EFKQSHARILKLGLFGDSFCASN-LV 70
Query: 176 AM--YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
A S GS+ A +F+ M E ++ M+ G + + +A+ ++ M GV PD
Sbjct: 71 ATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPD 130
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
+ T+ +L AC+ V+EGM + K G+ ++ ++ + G+ G + +
Sbjct: 131 NFTYPTLLKACARLPAVEEGMQVHAHILK-LGLENDVFVQNSLISMYGKCGEIGVCCAVF 189
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLG 321
M + ++ W L+ A H +LG
Sbjct: 190 EQMNERSVAS-WSALITA-----HASLG 211
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/515 (38%), Positives = 298/515 (57%), Gaps = 38/515 (7%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P P A F + +K C+L +H+ ++ G + T L+D Y+ A K
Sbjct: 116 PIQPNA--FTLSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQK 173
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC----------------- 129
LFD +P+R V++ +++CY ++ +A LF+ + ++ C
Sbjct: 174 LFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEA 233
Query: 130 -------------------KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+P+++T + VL +C +GALE G+ +H Y+ +G + +
Sbjct: 234 LVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRV 293
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+L+ MY KCGSL A +VF M KDVV+W++MI G ++G +A++ F M GV
Sbjct: 294 GTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGV 353
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P D TF VL+AC+H GLV +G D M +G+ P + HYGC+V+LLGRAG + +AY
Sbjct: 354 KPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAY 413
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
L+ SM V+PD +W TLL ACRIH +V+LGE + E L+ SG YVLL N+Y++
Sbjct: 414 DLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAAR 473
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
+W V ++R M G++ PGCS+I +K VHEFV D HPR +IY ML+++N LK
Sbjct: 474 NWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLK 533
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
Y + + LH++G +EK +L HSEKLA+AFG+++T PG I++ KNLR+C+DCH
Sbjct: 534 ERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHA 593
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + R++I+RDR RFHHF G CSC DYW
Sbjct: 594 VMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-------RIPTNPFACSFAIKCCMKFCSLMGGLQIH 53
M+ Y+ P E F KM ++ N + C + +L G +H
Sbjct: 220 MIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVH 279
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
+ V +G +++ ++ T L+D+Y +A K+FD + +D VAWN +I Y + +
Sbjct: 280 SYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSD 339
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG--SKMNLC 171
+AL LF + G KP D+T + VL ACAH G + G ++ + + GYG K+
Sbjct: 340 EALQLFHEMCC--IGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKD-GYGMEPKVEHY 396
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
++ + + G + A+++ + M E D V W ++
Sbjct: 397 GCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 124/300 (41%), Gaps = 38/300 (12%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQIHA +LR G L L Y++ + LF P + W +I+ +
Sbjct: 40 LQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHF 99
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA-------HLGALEFGEKIHRYISE- 161
AL + + +P+ T +L+AC H A++FG H Y+S
Sbjct: 100 DLFHHALSYYSQMLTHP--IQPNAFTLSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTG 157
Query: 162 --HGYGSKMNLCN-----------------SLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
Y ++ + +++ Y+K G L A +F+GM KDVV W
Sbjct: 158 LVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCW 217
Query: 203 SAMISGLAMNGHGRDAIESF-------GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+ MI G A +G +A+ F G V P++ T VLS+C G ++ G
Sbjct: 218 NVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG-K 276
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++ ++ GI N+ +VD+ + G L+ A ++ M K D W +++ IH
Sbjct: 277 WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIH 335
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 309/496 (62%), Gaps = 9/496 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMK-FCSLMGGLQIHARVLRDGYQLDSQLMTT 70
++ LF +MR++ + N F S + F S ++HA V++ Y+ S + T
Sbjct: 379 DQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVS-----EMHAEVIKTNYERSSSVGTA 433
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+D Y + +A K+F+ I +D +AW+ +++ Y + T +A LF L +E G K
Sbjct: 434 LLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE--GIK 491
Query: 131 PDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P++ T V+ ACA A E G++ H Y + + + + ++L+ MY+K G++ A E
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VFK E+D+VSW++MISG + +G + A+E F MQ+ + D TF GV++AC+H GL
Sbjct: 552 VFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGL 611
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V++G + + M D I P + HY C++DL RAG+L++A +I M P +T+WRTLL
Sbjct: 612 VEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
GA R+H++V LGE E LI L+ ++S YVLL N+Y++ G+W++ +R+ M+++ ++
Sbjct: 672 GAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKK 731
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PG S I +K + F+ D++HP N+IY L E++ +LK AGY + + H++ E+
Sbjct: 732 EPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQ 791
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K LS+HSE+LAIAFG++ATPP I++ KNLR+C DCHNF K++S V R +++RD
Sbjct: 792 KETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSN 851
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF++G CSC DYW
Sbjct: 852 RFHHFKDGLCSCGDYW 867
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 167/402 (41%), Gaps = 47/402 (11%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
+YS +E LF + + + S C G Q+H + ++ G
Sbjct: 67 SYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVD 126
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
+ T+L+D+Y E + ++FDE+ +R+ V+W L++ Y N LF +
Sbjct: 127 HVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQ 186
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
E G P+ T V+ A + G + G ++H + +HG+ + + NSLI++YS+ G
Sbjct: 187 YE--GVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGM 244
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A +VF M +D V+W++MI+G NG + E F MQ AGV P TF V+ +
Sbjct: 245 LRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKS 304
Query: 244 C-----------------------------------SHCGLVDEGMMFLDRMSKDFGILP 268
C S C +D+ + M +
Sbjct: 305 CASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEG----K 360
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
N+ + ++ + G DQA L + M GVKP+ + +L +H V + E
Sbjct: 361 NVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL---TVHYPVFVSEMHA 417
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
E + + S LL+ Y +G+ ++ E + K L
Sbjct: 418 EVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDL 459
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 148/321 (46%), Gaps = 18/321 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E F +F KM+ + + IK C L + + L+ G
Sbjct: 266 MIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSG 325
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
+ D ++T LM S ++ +A LF + + ++ V+W +IS ++N A+ LF
Sbjct: 326 FTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLF 385
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ RE G KP+ T +L H F ++H + + Y ++ +L+ Y
Sbjct: 386 SQMRRE--GVKPNHFTYSAIL--TVHYPV--FVSEMHAEVIKTNYERSSSVGTALLDAYV 439
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G+ A +VF+ + KD+++WSAM++G A G +A + F + + G+ P++ TF+
Sbjct: 440 KLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSS 499
Query: 240 VLSAC-SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV----VDLLGRAGLLDQAYQLIT 294
V++AC S ++G F + I +++ CV V + + G +D A+++
Sbjct: 500 VINACASPTAAAEQGKQF-----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK 554
Query: 295 SMGVKPDSTIWRTLLGACRIH 315
+ D W +++ H
Sbjct: 555 RQKER-DLVSWNSMISGYSQH 574
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 10/231 (4%)
Query: 84 ACKLFDEIPQRDTV--AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQ 141
A LFD+IP R T N L+ Y R+++T++AL LF +L S +PD+ T V
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSL--LHSSLQPDESTLSCVFN 101
Query: 142 ACAHLGALE--FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
CA G+L+ G ++H + G +++ SL+ MY K ++ VF M E++V
Sbjct: 102 ICA--GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNV 159
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
VSW+++++G + NG E F MQ GV P+ T + V++A + G+V G+ +
Sbjct: 160 VSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQ-VHA 218
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
M G I + ++ L R G+L A + M ++ D W +++
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIA 268
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 307/556 (55%), Gaps = 53/556 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV YS S + + F LF+ MR++ IP + + I
Sbjct: 192 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 251
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRD----------GYQLDSQLMTTLMDLY 75
C + G++IHA L++ G D + L+D+Y
Sbjct: 252 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 311
Query: 76 STFEKSFEACK-LFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
S +SF+A + +FD+IP +R+ V W V+I + + + DAL LF + E G P+
Sbjct: 312 SKC-RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 370
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGY--GSKMNLCNSLIAMYSKCGSLGMAFEV 190
T +L ACAHL A+ G++IH Y+ H S + N LI MYSKCG + A V
Sbjct: 371 AYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHV 430
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M +K +SW++M++G M+G G +A++ F M++AG PDD TF VL ACSHCG+V
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ + D MS D+G+ P HY +DLL R G LD+A++ + M ++P + +W LL
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 550
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACR+H +V L E + L+E+ A+ G Y L+ N+Y++ G W+ V +R M + G++
Sbjct: 551 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 610
Query: 371 PGCSTI-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PGCS + G KG F V D SHP +IY +L+ + ++K GYV E LH++ EE
Sbjct: 611 PGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 669
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K N L HSEKLA+A+G+L T PG IR+ KNLR+C DCH+ +S + + E+++RD
Sbjct: 670 KNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 729
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF+ G CSC YW
Sbjct: 730 RFHHFKNGSCSCGGYW 745
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 163/369 (44%), Gaps = 28/369 (7%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
F +K C + S G H + +G++ + + L+ +YS EA +FDE
Sbjct: 11 FTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDE 70
Query: 91 IPQR---DTVAWNVLISCYIRNQRTRDALCLFDNL----NREESGCKPDDVTCLLVLQAC 143
I QR D ++WN ++S ++++ AL LF + + + + + D ++ + +L AC
Sbjct: 71 ITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 130
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L A+ +++H +G + + N+LI Y+KCG + A +VF M KDVVSW+
Sbjct: 131 GSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 190
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AM++G + +G+ + A E F M++ + D T+T V++ S G E + +M
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQ-----AYQLITSM--------GVKPDSTIWRTLL- 309
G LPN V+ G Q AY L + G D ++ L+
Sbjct: 251 -GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 309
Query: 310 --GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
CR K R I I L+ + + +++ ++ GD +L M +
Sbjct: 310 MYSKCRSFK----AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 365
Query: 368 QTTPGCSTI 376
P TI
Sbjct: 366 GVAPNAYTI 374
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 11/193 (5%)
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+G + D T VL+AC L + G H I +G+ S + +CN+L+AMYS+CGSL
Sbjct: 4 AGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 63
Query: 187 AFEVFKGMPEK---DVVSWSAMISGLAMNGHGRDAIESFGAM------QRAGVFPDDQTF 237
A +F + ++ DV+SW++++S + + A++ F M + D +
Sbjct: 64 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 123
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+L AC V + ++ G ++ ++D + GL++ A ++ M
Sbjct: 124 VNILPACGSLKAVPQTKEVHGNAIRN-GTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 182
Query: 298 VKPDSTIWRTLLG 310
K D W ++
Sbjct: 183 FK-DVVSWNAMVA 194
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/505 (40%), Positives = 296/505 (58%), Gaps = 5/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS++S + LF +MR++ + N I C L G +HA +R G
Sbjct: 130 LIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFG 189
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+ +Y A KLFD +P++ + WN +IS Y +N L L+
Sbjct: 190 LDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYR 249
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E +G PD VT + VL +CAHLGA G ++ + I G+G L N+LI MY++
Sbjct: 250 KM--EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYAR 307
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A +F GM EK+V+SW+A+I+G M+G G A++ F M + PD F V
Sbjct: 308 CGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSV 367
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL ++G+ + M +D+G+ P HY CVVDLLGRAG L++A +LI SM V+P
Sbjct: 368 LSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEP 427
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IH++V L E E +IE + G YVLL N++S G+ E + +R
Sbjct: 428 DGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRV 487
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ L+ PGCS + +G +H F+ D +HP+ EIY MLD + +K G +
Sbjct: 488 MMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQ 547
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
E N EE + HSEKLAIAFG++ T PGT I V KNLR+C DCH F K++S + +
Sbjct: 548 ESRN---EELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVD 604
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD RFHHF+ G CSC DYW
Sbjct: 605 RQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 171/365 (46%), Gaps = 10/365 (2%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E L+ +M N F FA K C + G Q+H V++ G + + + T+L
Sbjct: 38 QEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSL 97
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVA--WNVLISCYIRNQRTRDALCLFDNLNREESGC 129
+ +Y A K+FDE +A +N LI+ Y N R DA+ LF + +E G
Sbjct: 98 ISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKE--GV 155
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+ VT L ++ CA L FG +H G +++ N L+ MY +CGS+ A +
Sbjct: 156 SVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARK 215
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F GMPEK +++W+AMISG A NG ++ + M+ G+ PD T GVLS+C+H G
Sbjct: 216 LFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGA 275
Query: 250 VDEGMMFLDRMS-KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
G R+ FG P + + ++++ R G L +A + M K + W +
Sbjct: 276 HAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGMTEK-NVISWTAI 332
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEK-VKELREFMNEKG 366
+ +H L ++ + +I G +V +L+ S G EK + + G
Sbjct: 333 IAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYG 392
Query: 367 LQTTP 371
LQ P
Sbjct: 393 LQPGP 397
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/492 (42%), Positives = 296/492 (60%), Gaps = 3/492 (0%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
Y + +M + + + + IK C +L G +H VL G+ LD + L+ L
Sbjct: 96 LYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVAL 155
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
Y A K+FD+I +R VAWN +IS Y +N ++A+ LFD + +E+G +PD
Sbjct: 156 YGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRM--KETGVEPDSA 213
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T + VL ACAHLGA G +H YI +G + L SLI MY +CG++ A EVF M
Sbjct: 214 TFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSM 273
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
E++VV+W+AMISG NG+G A+E F M+R G+FP+ TF VLSAC+H GLV+EG
Sbjct: 274 KERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGR 333
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVKPDSTIWRTLLGACR 313
+ +++ ++P + H C+VD+LGRAGLLD+AY I + P I +LGAC+
Sbjct: 334 RLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACK 393
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+HK+ LG +V EHL+ + + YV+L N+Y+ G ++V+ +R M K L+ G
Sbjct: 394 MHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGY 453
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
ST+ + + F + D SH N IY LDE+ + AGYV S +H L EE+ A
Sbjct: 454 STVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYA 513
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L YHSEKLAIAFG+L T GT IR+ KNLR+C DCH+ K +S + +RE+I+RD+LRFHH
Sbjct: 514 LRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHH 573
Query: 494 FREGRCSCNDYW 505
F+ G CSC DYW
Sbjct: 574 FKVGSCSCLDYW 585
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 19 EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTF 78
E + ++P +P A +F ++ + L Q+HA ++ GY L+T L++L
Sbjct: 2 ETKQPHKLPHSP-AYNFLLQAGPRLYLLH---QVHAHIIVSGYGRSRSLLTKLLNLACAA 57
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
++F +P D+ + LI ++ L+ S P + T
Sbjct: 58 GSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNF-SIYSLYFYSRMVLSNVSPSNYTFTS 116
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
V+++CA L AL+ G +H ++ HG+G + + +L+A+Y KCG L A +VF + E+
Sbjct: 117 VIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERS 176
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+V+W++MISG NG ++AI F M+ GV PD TF VLSAC+H G G +
Sbjct: 177 IVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHE 236
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ + G+ N+ ++++ R G + +A ++ SM
Sbjct: 237 YIVGN-GLDLNVVLGTSLINMYIRCGNVSKAREVFDSM 273
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +E LF++M++ + + + C + G +H ++ +G
Sbjct: 183 MISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNG 242
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ L T+L+++Y +A ++FD + +R+ VAW +IS Y N A+ LF
Sbjct: 243 LDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY---GSKMNLCNSLIAM 177
+ R +G P+ +T + VL ACAH G + G ++ I E + G + N+C L+ M
Sbjct: 303 EMRR--NGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVC--LVDM 358
Query: 178 YSKCGSLGMAFEVFK-GMPEKDVVS-WSAMISGLAMN 212
+ G L A+ K +PE + +AM+ M+
Sbjct: 359 LGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMH 395
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 112/277 (40%), Gaps = 48/277 (17%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P +LQA L L ++H +I GYG +L L+ + GS+ ++
Sbjct: 10 PHSPAYNFLLQAGPRLYLLH---QVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQI 66
Query: 191 FKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
F +P D ++++I + + + ++ + M + V P + TFT V+ +C+
Sbjct: 67 FLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSA 126
Query: 250 VDEGMMFLDR-MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM------------ 296
+ G + + FG+ +++ +V L G+ G L A ++ +
Sbjct: 127 LKHGRVVHGHVLVHGFGL--DVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMI 184
Query: 297 ----------------------GVKPDSTIWRTLLGACRIHKHVTLG----ERVIEHLIE 330
GV+PDS + ++L AC +LG E ++ + ++
Sbjct: 185 SGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLD 244
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
L L+N+Y G+ K +E+ + M E+ +
Sbjct: 245 LNVVLGTS---LINMYIRCGNVSKAREVFDSMKERNV 278
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 307/556 (55%), Gaps = 53/556 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV YS S + + F LF+ MR++ IP + + I
Sbjct: 299 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 358
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRD----------GYQLDSQLMTTLMDLY 75
C + G++IHA L++ G D + L+D+Y
Sbjct: 359 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 418
Query: 76 STFEKSFEACK-LFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
S +SF+A + +FD+IP +R+ V W V+I + + + DAL LF + E G P+
Sbjct: 419 SKC-RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 477
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGY--GSKMNLCNSLIAMYSKCGSLGMAFEV 190
T +L ACAHL A+ G++IH Y+ H S + N LI MYSKCG + A V
Sbjct: 478 AYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHV 537
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M +K +SW++M++G M+G G +A++ F M++AG PDD TF VL ACSHCG+V
Sbjct: 538 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ + D MS D+G+ P HY +DLL R G LD+A++ + M ++P + +W LL
Sbjct: 598 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 657
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACR+H +V L E + L+E+ A+ G Y L+ N+Y++ G W+ V +R M + G++
Sbjct: 658 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 717
Query: 371 PGCSTI-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PGCS + G KG F V D SHP +IY +L+ + ++K GYV E LH++ EE
Sbjct: 718 PGCSWVQGQKGTA-SFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 776
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K N L HSEKLA+A+G+L T PG IR+ KNLR+C DCH+ +S + + E+++RD
Sbjct: 777 KNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 836
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF+ G CSC YW
Sbjct: 837 RFHHFKNGSCSCGGYW 852
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 8/269 (2%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
F +K C + S G H + +G++ + + L+ +YS EA +FDE
Sbjct: 118 FTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDE 177
Query: 91 IPQR---DTVAWNVLISCYIRNQRTRDALCLFDNL----NREESGCKPDDVTCLLVLQAC 143
I QR D ++WN ++S ++++ AL LF + + + + + D ++ + +L AC
Sbjct: 178 ITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 237
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L A+ +++H +G + + N+LI Y+KCG + A +VF M KDVVSW+
Sbjct: 238 GSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 297
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AM++G + +G+ + A E F M++ + D T+T V++ S G E + +M
Sbjct: 298 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 357
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
G LPN V+ G Q ++
Sbjct: 358 -GSLPNCVTIISVLSACASLGAFSQGMEI 385
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A + + + V WN+LI +I+ R A+ + + R +G + D T VL+AC
Sbjct: 70 ALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR--AGTRLDHFTLPHVLKAC 127
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK---DVV 200
L + G H I +G+ S + +CN+L+AMYS+CGSL A +F + ++ DV+
Sbjct: 128 GELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVI 187
Query: 201 SWSAMISGLAMNGHGRDAIESFGAM------QRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
SW++++S + + A++ F M + D + +L AC V +
Sbjct: 188 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 247
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
++ G ++ ++D + GL++ A ++ M K D W ++
Sbjct: 248 EVHGNAIRN-GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK-DVVSWNAMVA 301
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S +L ++A Y CG+ A V + + V W+ +I G AI M
Sbjct: 49 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 108
Query: 226 QRAGVFPDDQTFTGVLSACSH-----CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
RAG D T VL AC CG G++ + G N+ +V +
Sbjct: 109 LRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCN------GFESNVFICNALVAMY 162
Query: 281 GRAGLLDQA---YQLITSMGVKPDSTIWRTLLGA----CRIHKHVTLGERVIEHLIELKA 333
R G L++A + IT G+ D W +++ A + L ++ + E
Sbjct: 163 SRCGSLEEASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 221
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELRE 360
E D + ++N+ + G + V + +E
Sbjct: 222 NERSDIISIVNILPACGSLKAVPQTKE 248
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/471 (43%), Positives = 291/471 (61%), Gaps = 3/471 (0%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
I C + C +H ++ G++ + TLMD Y+ + + K+FD + + D
Sbjct: 204 VISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETD 263
Query: 96 TVAWNVLISCYIRNQRTRDALCLF-DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+WN LI+ Y +N + +A LF D + R E + + VT VL ACAH GAL+ G+
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGE--VRYNAVTLSAVLLACAHSGALQIGKC 321
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
IH + + + + S++ MY KCG + MA + F + K+V SW+ M++G M+GH
Sbjct: 322 IHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGH 381
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
G++A++ F M R G+ P+ TF VL+ACSH GL+ EG + ++M +F + P I HY
Sbjct: 382 GKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYS 441
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
C+VDLLGRAG L +AY LI M VKPD +W +LLGACRIHK+V LGE L +L
Sbjct: 442 CMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPS 501
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPR 394
G YVLL N+Y+ G W+ V+ +R M GL TPG S + KG VH F+V D HP+
Sbjct: 502 NCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQ 561
Query: 395 INEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGT 454
+IY+ LDE+N +L+ GY+ +TS L+++ EEKG L HSEKLA+AFG++ + PG+
Sbjct: 562 HEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGS 621
Query: 455 TIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
I++ KNLRIC DCH K++S + NRE++IRD RFHHF++G CSC DYW
Sbjct: 622 VIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 163/342 (47%), Gaps = 18/342 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S + Y F MR+ + N IK C L G QIH + G
Sbjct: 57 IIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFG 116
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF- 119
Y D + + L+D+YS +A KLFDEIP+R+ V+W +IS Y++N+R R+A+ LF
Sbjct: 117 YGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFK 176
Query: 120 -----DNLNREE---SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
D + +E G D V V+ ACA + E +H + G+ + +
Sbjct: 177 EFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVG 236
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGV 230
N+L+ Y+KCG + ++ +VF GM E DV SW+++I+ A NG +A F M +R V
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL---GRAGLLD 287
+ T + VL AC+H G + G D++ K + N+ +VD+ GR +
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVK-MELEDNLVVGTSIVDMYCKCGRVEMAR 355
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+A+ + VK W ++ +H H +V +I
Sbjct: 356 KAFDRLKRKNVKS----WTVMVAGYGMHGHGKEAMKVFYEMI 393
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 52/350 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ Y+ + E F LF M ++ + N S + C +L G IH +V++
Sbjct: 270 LIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM 329
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + + T+++D+Y + A K FD + +++ +W V+++ Y + ++A+ +F
Sbjct: 330 ELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVF 389
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G KP+ +T + VL AC+H G L+ G + +KM
Sbjct: 390 YEMIR--CGIKPNYITFVSVLAACSHAGLLKEGWH---------WFNKM----------- 427
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KC F+V G+ +S M+ L G+ + E++G +Q V PD +
Sbjct: 428 KC-----EFDVEPGIEH-----YSCMVDLLGRAGYLK---EAYGLIQEMKVKPDFIVWGS 474
Query: 240 VLSACSHCGLVDEGMMFLDRMSK-------DFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+L AC V+ G + ++ K + +L NI+ D + R +L + + L
Sbjct: 475 LLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGL 534
Query: 293 ITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL--KAQESG 337
+ + G V+ + L+G +H E++ E+L EL K QE G
Sbjct: 535 LKTPGYSIVEHKGRVHVFLVGDKEHPQH----EKIYEYLDELNVKLQEVG 580
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
K + + V SW+++I+ A +G A+ +F +M++ + P+ TF + +CS +
Sbjct: 44 KYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLC 103
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLL 309
G + + + FG +I ++D+ + G L+ A +L + P+ + W +++
Sbjct: 104 AGKQ-IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEI---PERNVVSWTSMI 159
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 299/515 (58%), Gaps = 24/515 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y +S + LF +M ++ +P N I C+ +L G +H L+ G
Sbjct: 114 LVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 173
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ + +Y A KLFDE+P + ++WN ++S Y +N + L L+
Sbjct: 174 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 233
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N++ +G PD VT + VL +CA+LGA G ++ + G+ S L N+LI MY++
Sbjct: 234 NMDM--NGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYAR 291
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A VF GMPE+ +VSW+A+I G M+GHG A++ F M R+G+ PD F V
Sbjct: 292 CGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCV 351
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL D+G+ + M +++ + P HY C+VDLLGRAG L +A LI SM +KP
Sbjct: 352 LSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKP 411
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IHK+V L E E +IEL+ + G YVLL N+YS+ + + V +R
Sbjct: 412 DGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRI 471
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK L+ PGCS + LKG VH F+V D +H + +EIY++L+E+ +
Sbjct: 472 MMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAII----------- 520
Query: 421 ELHNLGAEEKGN----------ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ G EK N + HSEKLA+AFG+L T G + + KNLRIC DCH
Sbjct: 521 -MQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHL 579
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
F K++S + +R++ +RD RFHHFR G CSC DYW
Sbjct: 580 FFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 177/365 (48%), Gaps = 12/365 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ L+ +M + N F FA+K C + G Q H ++ + G + + T L+
Sbjct: 23 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 82
Query: 73 DLYSTFEKSFEACKLFDEI--PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
+Y A K+F+E ++ TV +N L+S Y+ N + DA+ LF +N E G
Sbjct: 83 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEE--GVP 140
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+ VT L ++ AC LE G +H ++G+ S +++ N I MY KCGS+ A ++
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F MP K ++SW+AM+SG A NG + +E + M GV PD T GVLS+C++ G
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTL 308
G +M G N ++++ R G L +A + M P+ T+ W +
Sbjct: 261 SVGHEVEFKMQAS-GFTSNPFLNNALINMYARCGNLTKAQAVFDGM---PERTLVSWTAI 316
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGD-YVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+G +H H + ++ + +I + G +V +L+ S G ++ E + M ++
Sbjct: 317 IGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMM-KRNY 375
Query: 368 QTTPG 372
Q PG
Sbjct: 376 QLEPG 380
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/470 (41%), Positives = 293/470 (62%), Gaps = 3/470 (0%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+ C + +L G +H+ G + + ++D+Y + A ++F+ I ++D
Sbjct: 18 VPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVFNRIREKDV 77
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++W ++S ++ +++L LF + + +PD++T + VL ACA GAL+ G+ IH
Sbjct: 78 LSWTSMLSGLAKSGYFQESLALFRKMQLHK--IEPDEITLVGVLSACAQTGALDQGKYIH 135
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I + + L +L+ MY+KCGS+ +A +VF+ M ++V +W+AMI GLAM+GHG
Sbjct: 136 LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGE 195
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
DAI F M+ + PDD TF +L ACSH GLVDEG+ M F I P + HYGCV
Sbjct: 196 DAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCV 255
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
VDLL RA +D A I +M +K +S +W TLLGACR H L E++ +IEL+
Sbjct: 256 VDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSC 315
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRIN 396
G YV+L NLY+ V W+ +LR+ M KG++ TPGCS I L G++H+FV D SH +
Sbjct: 316 GRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTE 375
Query: 397 EIYQMLDEINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT 455
+IY M++E+ +++ + G+V + L ++ EEK ++L HSEKLAIA G+++TP G+
Sbjct: 376 QIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSP 435
Query: 456 IRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IR+ KNLR+C DCH+F KV S VYNRE++ RDR RFHHF+EG CSC D+W
Sbjct: 436 IRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 111/188 (59%), Gaps = 2/188 (1%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD+VT + ++ ACA LG LE G+ +H Y E G +++ N+++ MY KC + A E
Sbjct: 8 RPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQE 67
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF + EKDV+SW++M+SGLA +G+ ++++ F MQ + PD+ T GVLSAC+ G
Sbjct: 68 VFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGA 127
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+D+G ++ + F I ++ +VD+ + G +D A Q+ M V+ T W ++
Sbjct: 128 LDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT-WNAMI 185
Query: 310 GACRIHKH 317
G +H H
Sbjct: 186 GGLAMHGH 193
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + S +E LF KM+ +I + + C + +L G IH + +
Sbjct: 83 MLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFE 142
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D L T L+D+Y+ A ++F + R+ WN +I + DA+ LFD
Sbjct: 143 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFD 202
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ E PDDVT + +L AC+H G ++ G + + + ++ +M ++ +
Sbjct: 203 QM--EXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLC 260
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ + A + MP K + V W+ ++ GH
Sbjct: 261 RARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 296
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 294/508 (57%), Gaps = 33/508 (6%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
F F +K ++ S+ G +H +LR G Q D + T+L+ LY + +A K+FD
Sbjct: 135 FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN 194
Query: 91 I-------------------------------PQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ P R+ V+W +IS Y ++ + AL LF
Sbjct: 195 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 254
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
D + +E+SG +P+ VT + VL ACA L LE G +IH G S ++ +L AMY+
Sbjct: 255 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 314
Query: 180 KCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
KCGSL A F + EK++++W+ MI+ A GHG A+ +F M +AG+ PDD TF
Sbjct: 315 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 374
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
TG+LS CSH GLVD G+ + + MS + I P + HY CV DLLGRAG L +A +L+ M
Sbjct: 375 TGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMP 434
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ +IW +LL ACR H+++ + E L L+ + +G+YVLL N+Y+ G W++V +
Sbjct: 435 MPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDK 494
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR + +G + +PGCS I + G H F+ D SHP+ EIY L+ + +++K AGY +
Sbjct: 495 LRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPD 554
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ LH++ EEK L HSEKLA+AFG+L TP T +RV KNLRIC DCH +S
Sbjct: 555 TSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISE 614
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y REVI+RD RFHHF+ G CSC DYW
Sbjct: 615 IYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLR 58
M+ YS S ++ LF++M ++ P + + C + +L G QIH R
Sbjct: 237 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR 296
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI--PQRDTVAWNVLISCYIRNQRTRDAL 116
G ++ ++ L +Y+ +A FD++ +++ +AWN +I+ Y A+
Sbjct: 297 MGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAV 356
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
F + ++G +PDD+T +L C+H G ++ G K ++S
Sbjct: 357 STFREM--IQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMS 398
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T VL++ L ++ G+ +H I G + + SLI +Y KCG + A +VF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M +DV SW+A+++G +G A+ F M + ++T ++S S GL
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV----SWTTMISGYSQSGLAQ 248
Query: 252 EGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLD---QAYQLITSMGVKPDSTI 304
+ + D M K D G+ PN V+ + L+ Q ++L MG+ ++++
Sbjct: 249 QALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASV 305
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 298/505 (59%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LFE+M ++ I + + + + CC ++ L G ++H + +
Sbjct: 217 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 276
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LMD+Y+ EA +F E+ +D ++WN +I Y +N +AL LF
Sbjct: 277 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF- 335
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
NL EE PD+ T VL ACA L A + G +IH YI +GY S ++ NSL+ MY+K
Sbjct: 336 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 395
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L +A +F + KD+VSW+ MI+G M+G G++AI F M++AG+ D+ +F +
Sbjct: 396 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 455
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLVDEG F + M + I P + HY C+VD+L R G L +AY+ I +M + P
Sbjct: 456 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 515
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V E + EL+ + +G YVL+ N+Y+ WE+VK LR+
Sbjct: 516 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 575
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ ++GL+ PGCS I +KG V+ FV D S+P I L ++ ++ GY
Sbjct: 576 RIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKY 635
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + EK AL HSEKLA+A G++++ G IRV KNLR+C DCH AK +S +
Sbjct: 636 ALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTR 695
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC +W
Sbjct: 696 REIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 151/296 (51%), Gaps = 6/296 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF+KM + + + S K S+ GG Q+H +L+ G+ + + +L+ Y
Sbjct: 31 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 90
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
++ A K+FDE+ +RD ++WN +I+ Y+ N L +F + SG + D T
Sbjct: 91 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF--VQMLVSGIEIDLATI 148
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ V CA + G +H + + + CN+L+ MYSKCG L A VF+ M +
Sbjct: 149 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 208
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+ VVS+++MI+G A G +A++ F M+ G+ PD T T VL+ C+ L+DEG
Sbjct: 209 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 268
Query: 257 LDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ + + D G +I ++D+ + G + +A + + M VK D W T++G
Sbjct: 269 HEWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 321
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FDE+ + WN+L++ ++ ++ LF + SG + D T V ++ + L
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM--SSGVEMDSYTFSCVSKSFSSLR 58
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
++ GE++H +I + G+G + ++ NSL+A Y K + A +VF M E+DV+SW+++I+
Sbjct: 59 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 118
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC----------------------- 244
G NG + F M +G+ D T V + C
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178
Query: 245 ------------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
S CG +D MS ++ Y ++ R GL +A +L
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSD-----RSVVSYTSMIAGYAREGLAGEAVKL 233
Query: 293 ITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
M G+ PD +L C ++ + G+RV E + E
Sbjct: 234 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 274
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/494 (41%), Positives = 299/494 (60%), Gaps = 5/494 (1%)
Query: 16 YLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQI----HARVLRDGYQLDSQLMTTL 71
+LFEK S A+ + CS + + H ++ G + TL
Sbjct: 174 FLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTL 233
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D Y+ + + K+FD++ ++D V+WN +I+ Y +N + DA +F + + G K
Sbjct: 234 LDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGG-KY 292
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
++VT +L ACAH GAL G +H + + GY + + + S+I MY KCG MA F
Sbjct: 293 NEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAF 352
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
GM EK+V SW+AMI+G M+G R+A++ F M AGV P+ TF VL+ACSH G ++
Sbjct: 353 DGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLE 412
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + + MS ++ + P + HYGC+VDLLGRAG + +AY LI SM V+ D +W +LL A
Sbjct: 413 EGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIHK V L E L +L G YVLL N+Y+ G W+ V+ +R + ++GL P
Sbjct: 473 CRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPP 532
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + LKG VH F+V D HP+ +IY+ L+E++ +L+ AGYV + S LH++ EEK
Sbjct: 533 GYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKE 592
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ HSEKLA+AFGV+ + PG+TI V KNLR+C DCH K++S + +RE+I+RD RF
Sbjct: 593 MIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRF 652
Query: 492 HHFREGRCSCNDYW 505
HHF++G CSC DYW
Sbjct: 653 HHFKDGLCSCGDYW 666
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 151/311 (48%), Gaps = 10/311 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E F MR+ I N AIK C L G Q H + L G++ D + + L+
Sbjct: 65 ESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALI 124
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL-------NRE 125
D+YS K A LFDEIP+R+ V W LI+ Y++N +AL +F N E
Sbjct: 125 DMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGE 184
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
E G D V + VL AC+ + E +H + G M + N+L+ Y+KCG +
Sbjct: 185 EVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVS 244
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP-DDQTFTGVLSAC 244
++ +VF M EKDVVSW++MI+ A NG DA E F M +AG ++ T + +L AC
Sbjct: 245 LSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLAC 304
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
+H G + GM D++ K G + N+ ++D+ + G + A M K +
Sbjct: 305 AHEGALRVGMCLHDQVIK-MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRS- 362
Query: 305 WRTLLGACRIH 315
W ++ +H
Sbjct: 363 WTAMIAGYGMH 373
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
K DV SW+++I+ LA G +++ +F M++ + P+ TF + +CS ++
Sbjct: 40 KYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLN 99
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G + + FG ++ ++D+ + G L A L + + + W +L+
Sbjct: 100 SGKQ-AHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP-RRNIVTWTSLI 155
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/487 (43%), Positives = 290/487 (59%), Gaps = 19/487 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + +Q+HA VLR G D +L+TTL+D Y+ A K+F
Sbjct: 112 DALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVF 171
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------NREESGCKPDDVTCLLVL 140
DE+ RD WN L++ + AL LF L +REE P++VT + VL
Sbjct: 172 DEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREE----PNEVTIVAVL 227
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD-- 198
ACA +G L+ G +H + + G + +CNSLI MYSKCGSL A +VF + +D
Sbjct: 228 SACAQIGLLKDGMYVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRT 287
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+VS++A I +M+GHG DA+ F M + PD T+ VL C+H GLVD+G+ +
Sbjct: 288 LVSYNAAIQAHSMHGHGGDALRLFDEMP-TRIEPDGVTYLAVLCGCNHSGLVDDGLRVFN 346
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M + PN+ HYG +VDLLGRAG L +AY + SM D +W+TLLGA ++H V
Sbjct: 347 SMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVV 402
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L E L EL + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 403 ELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEI 462
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
GV+H+F+ D HPR EIY+ L++I ++ GY E ++ LH++G EEK AL YHS
Sbjct: 463 DGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHS 522
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG++ATPPG T+RV KNLRIC DCH AK++S Y R ++IRDR RFH F +G+
Sbjct: 523 EKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQ 582
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 583 CSCRDYW 589
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD ++ L+A A ++H + G + + L +L+ Y+KCG L A +
Sbjct: 110 RPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARK 169
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF--------PDDQTFTGVL 241
VF M +DV +W+++++GLA A+ F + A F P++ T VL
Sbjct: 170 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL--ANSFQELPSREEPNEVTIVAVL 227
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SAC+ GL+ +G M++ +K FG+ N+ ++D+ + G L +A + S +KP+
Sbjct: 228 SACAQIGLLKDG-MYVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHS--IKPE 284
Query: 302 STIWRTLLGACRIH 315
+ A + H
Sbjct: 285 DRTLVSYNAAIQAH 298
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/509 (39%), Positives = 306/509 (60%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKF-CS---LMGGLQIHARV 56
+ RA +++ EE L+ KM + + ++ F ++ +K C+ C+ LM G +IHA +
Sbjct: 149 LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL 208
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
R GY +MTTL+D+Y+ F A +F +P R+ V+W+ +I+CY +N + +AL
Sbjct: 209 TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + RE P+ VT + VLQACA L ALE G+ IH YI G S + + ++L+
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY +CG L + VF M ++DVVSW+++IS ++G+G+ AI+ F M G P T
Sbjct: 329 MYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 388
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+EG + M +D GI P I HY C+VDLLGRA LD+A +++ M
Sbjct: 389 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+P +W +LLG+CRIH +V L ER L L+ + +G+YVLL ++Y+ W++VK
Sbjct: 449 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 508
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+++ + +GLQ PG + ++ ++ FV D +P + +I+ L ++ + +K GY+
Sbjct: 509 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIP 568
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L+ L EEK + HSEKLA+AFG++ T G IR+ KNLR+C DCH F K +S
Sbjct: 569 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 628
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+E+++RD RFH F+ G CSC DYW
Sbjct: 629 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 168/371 (45%), Gaps = 34/371 (9%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R S SSP + Y I CC SL L++H +L +G
Sbjct: 66 IRVLSQESSPSQQTY-----------------ELLILCCGHRSSLSDALRVHRHILDNGS 108
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D L T L+ +YS A K+FD+ +R WN L + L L+
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 122 LNREESGCKPDDVTCLLVLQACAH----LGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+NR G + D T VL+AC + L G++IH +++ GY S + + +L+ M
Sbjct: 169 MNR--IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR--AGVFPDDQ 235
Y++ G + A VF GMP ++VVSWSAMI+ A NG +A+ +F M R P+
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 236 TFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
T VL AC+ +++G + ++ R D ILP I +V + GR G L+ ++
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLD-SILPVI---SALVTMYGRCGKLEVGQRV 342
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGD 351
M + D W +L+ + +H + ++ E ++ A + +V +L S G
Sbjct: 343 FDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 352 WEKVKELREFM 362
E+ K L E M
Sbjct: 402 VEEGKRLFETM 412
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 15/277 (5%)
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N LI + + + A+ + L++E S P T L++ C H +L ++HR+I
Sbjct: 50 NQLIQSLCKEGKLKQAIRV---LSQESS---PSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
++G L LI MYS GS+ A +VF ++ + W+A+ L + GHG + +
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSAC--SHCGL--VDEGMMFLDRMSKDFGILPNIHHYGC 275
+ M R GV D T+T VL AC S C + + +G +++ G +++
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR-GYSSHVYIMTT 222
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+VD+ R G +D A + M V+ + W ++ + R ++
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 336 SGDYVLLLNLY---SSVGDWEKVKELREFMNEKGLQT 369
S + V ++++ +S+ E+ K + ++ +GL +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 299/510 (58%), Gaps = 12/510 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMK-----FCSLMGGLQIHAR 55
++ YS E LF M ++ + N S +K FC Q+H
Sbjct: 361 IISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE-----QVHTI 415
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
++ GYQ D + +L+D Y +A K+F+ P D VA+ +I+ Y + +A
Sbjct: 416 SIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEA 475
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L ++ L ++ KPD + ACA+L A E G++IH ++ + G S + NSL+
Sbjct: 476 LKMY--LRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCGS+ A +F + + +VSWSAMI GLA +GHGR A++ F M + G+ P+
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHI 593
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T VLSAC+H GLV E F M K FGI P HY C+VD+LGR G LD+A L+
Sbjct: 594 TLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKE 653
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M + + +W LLGA RIHK++ LG E L+ L+ ++SG ++LL N+Y+S G W+ V
Sbjct: 654 MPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNV 713
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
++R M ++ PG S I LK V+ F+V D SHPR EIY LD++ ++L AGYV
Sbjct: 714 AKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYV 773
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
I ++LH++ EK L +HSEKLA+AFG++ATPPG IRV KNLR+C+DCH K +
Sbjct: 774 PMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFI 833
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S V +RE+I+RD RFHHFR+G CSC DYW
Sbjct: 834 SKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 176/361 (48%), Gaps = 16/361 (4%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L KM R+ + F S A+K C + G Q+H+ +++ + DS + L+D+YS
Sbjct: 276 LLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYS 335
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A +FD +P +D + WN +IS Y +A+ LF N+ +E G + + T
Sbjct: 336 KCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKE--GLEFNQTTL 393
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+L++ A A F E++H + GY + NSL+ Y KC L A +VF+ P
Sbjct: 394 STILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPA 453
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+D+V++++MI+ + G G +A++ + MQ + PD F+ + +AC++ ++G
Sbjct: 454 EDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQI 513
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACR 313
+ K G+L ++ +V++ + G +D A + I+ G+ W ++G
Sbjct: 514 HVHVLK-CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGI----VSWSAMIGGLA 568
Query: 314 IHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSSVGDWEKVKELREF--MNEKGLQTT 370
H H G + ++ + LK +++ L+++ S+ V E R F + EK T
Sbjct: 569 QHGH---GRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGIT 625
Query: 371 P 371
P
Sbjct: 626 P 626
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 40/370 (10%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L +M I N F+ S + C G+++H +++ GY D L+D+Y+
Sbjct: 175 LVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYA 234
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A +F EIP+ D V+WN +I+ + +++ AL L + P T
Sbjct: 235 KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYR--VAPSMFTL 292
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L+ACA +G ++ G ++H + + + LI MYSKCG L A VF MP
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS----------- 245
KDV+ W+++ISG + G+ +A+ F M + G+ + T + +L + +
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412
Query: 246 HCGLVDEGMMF-----------------LDRMSKDFGILP--NIHHYGCVVDLLGRAGLL 286
H + G + L+ +K F + P ++ Y ++ + GL
Sbjct: 413 HTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLG 472
Query: 287 DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE---LKAQESGDYV 340
++A ++ M +KPD+ I+ +L AC G+++ H+++ L +G+
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNS- 531
Query: 341 LLLNLYSSVG 350
L+N+Y+ G
Sbjct: 532 -LVNMYAKCG 540
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G+ IHAR++R L L++LYS + A KL + + D V+W+ LIS Y++
Sbjct: 69 GMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQ 125
Query: 109 NQRTRDALCLFDNL-----------------------NRE---------------ESGCK 130
N R +AL + + N E +G
Sbjct: 126 NGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGIS 185
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P++ + VL ACA L +G K+H Y+ + GY S N+L+ MY+K G A V
Sbjct: 186 PNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAV 245
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F +P+ D+VSW+A+I+G ++ A++ G M V P T + L AC+ GLV
Sbjct: 246 FYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLV 305
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G + K + P+ ++D+ + GLL A + M K D +W +++
Sbjct: 306 KLGRQLHSALMK-MDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSII 362
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ +YSKC +A ++ E D+VSWSA+ISG NG G +A+ ++ M G ++
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF+ VL CS ++++ + IH V +++
Sbjct: 149 FTFSSVLKGCS--------------LTRNLELGKQIHRVALVTEMI-------------- 180
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
S G+ P+ T+L AC + G +V +LI+L
Sbjct: 181 STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKL 217
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/507 (40%), Positives = 313/507 (61%), Gaps = 3/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + E F LF +MR + + + IK C + Q+H +V+++G
Sbjct: 265 MIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG 324
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
D + T LM YS + +A KLF + ++ V+W +IS Y++N RT A+ LF
Sbjct: 325 SDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLF 384
Query: 120 DNLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ REE G +P++ T VL ACA ++E G++ H + G+ + + + ++L+ MY
Sbjct: 385 CQMRREE-GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMY 443
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K G++ A EVFK ++D+VSW++MISG A +G G+ +++ F M+ + D TF
Sbjct: 444 AKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFI 503
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GV+SAC+H GLV+EG + D M KD+ I+P + HY C+VDL RAG+L++A LI M
Sbjct: 504 GVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPF 563
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+TIWRTLL ACR+H +V LGE E LI L+ Q+S YVLL N+Y++ G+W++ ++
Sbjct: 564 PAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKV 623
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M+ K ++ G S I +K F+ D+SHP+ + IY L+E++ +LK AGY +
Sbjct: 624 RKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDT 683
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E K LS HSE+LAIAFG++ATPPGT I++ KNLR+C DCH K++S +
Sbjct: 684 KYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKI 743
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD RFHHF+ G CSC DYW
Sbjct: 744 EGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 158/343 (46%), Gaps = 37/343 (10%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S + +E LF +R+ PT+ + S +K C + G Q+H + ++ G+ D
Sbjct: 67 FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T+L+D+Y E + ++FDE+ ++ V+W L++ Y +N AL LF +
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G KP+ T VL A GA+E G ++H + + G S + + NS++ MYSK +
Sbjct: 187 E--GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMV 244
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF M ++ VSW++MI+G NG +A E F M+ GV F V+ C
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304
Query: 245 S-----------HCGLVDEGMMF-----------------LDRMSKDFGIL---PNIHHY 273
+ HC ++ G F +D K F ++ N+ +
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSW 364
Query: 274 GCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGAC 312
++ + G D+A L M GV+P+ + ++L AC
Sbjct: 365 TAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC 407
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+LFDE PQ+ N L+ + RN + ++AL LF L R SG D + VL+ C
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRR--SGSPTDGSSLSCVLKVCGC 104
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G+++H + G+ +++ SL+ MY K S+ VF M K+VVSW+++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
++G NG A++ F MQ G+ P+ TF VL + G V++G+ + M G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKSG 223
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ I +V++ ++ ++ A + SM + ++ W +++
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-NAVSWNSMIAG 268
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 298/505 (59%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LFE+M ++ I + + + + CC ++ L G ++H + +
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LMD+Y+ EA +F E+ +D ++WN +I Y +N +AL LF
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF- 486
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
NL EE PD+ T VL ACA L A + G +IH YI +GY S ++ NSL+ MY+K
Sbjct: 487 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L +A +F + KD+VSW+ MI+G M+G G++AI F M++AG+ D+ +F +
Sbjct: 547 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLVDEG F + M + I P + HY C+VD+L R G L +AY+ I +M + P
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 666
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V E + EL+ + +G YVL+ N+Y+ WE+VK LR+
Sbjct: 667 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 726
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ ++GL+ PGCS I +KG V+ FV D S+P I L ++ ++ GY
Sbjct: 727 RIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKY 786
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + EK AL HSEKLA+A G++++ G IRV KNLR+C DCH AK +S +
Sbjct: 787 ALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTR 846
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC +W
Sbjct: 847 REIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 151/296 (51%), Gaps = 6/296 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF+KM + + + S K S+ GG Q+H +L+ G+ + + +L+ Y
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
++ A K+FDE+ +RD ++WN +I+ Y+ N L +F + SG + D T
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF--VQMLVSGIEIDLATI 299
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ V CA + G +H + + + CN+L+ MYSKCG L A VF+ M +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+ VVS+++MI+G A G +A++ F M+ G+ PD T T VL+ C+ L+DEG
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 257 LDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ + + D G +I ++D+ + G + +A + + M VK D W T++G
Sbjct: 420 HEWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 45/340 (13%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+P ++ C SL G ++ + +G+ +DS L + L +Y+ EA ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
DE+ + WN+L++ ++ ++ LF + SG + D T V ++ + L +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM--MSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+ GE++H +I + G+G + ++ NSL+A Y K + A +VF M E+DV+SW+++I+G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC------------------------ 244
NG + F M +G+ D T V + C
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 245 -----------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
S CG +D MS ++ Y ++ R GL +A +L
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSD-----RSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 294 TSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
M G+ PD +L C ++ + G+RV E + E
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/513 (40%), Positives = 302/513 (58%), Gaps = 9/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT----NPFACSFAIKCCMKFCSLMGGLQI---- 52
M+ Y + + LF+ ++ N S + + CS + G I
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGV 1273
Query: 53 HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
H V++ G+ + TLMD Y+ + + K+FD + ++D ++WN +I+ Y ++ +
Sbjct: 1274 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 1333
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+AL +F + R G + + VT VL ACAH GAL G+ IH + + + +
Sbjct: 1334 GEALEVFHGMVRH-VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
S+I MY KCG + MA + F M EK+V SW+AM++G M+G ++A++ F M RAGV P
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF VL+ACSH GLV+EG + + M + I P I HYGC+VDL GRAG L++AY L
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 1512
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I M +KPD +W +LLGACRIHK+V LGE + L EL G YVLL NLY+ G W
Sbjct: 1513 IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRW 1572
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
V+ +R M + L PG S + LKG VH F+V D HP IY+ L+++ +L+
Sbjct: 1573 ADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKI 1632
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV +TS LH++ EEK L HSEKLA+AFGV+ + PGTTI + KNLR+C DCH
Sbjct: 1633 GYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVI 1692
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + +R+ ++RD RFHHF++G CSC DYW
Sbjct: 1693 KLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 173/333 (51%), Gaps = 33/333 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA +++ E+ L++ M + I + F F IK C F S+ G +H +++ G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 YQLDSQLMTTLMDLY----------STFEKSF---------------------EACKLFD 89
+ D + L+D Y FEK EA ++FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP ++ V+W +I+ YIRNQ+ +AL LF + E P++ T + +++AC +G L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN--IFPNEYTMVSLIKACTEMGIL 273
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
G IH Y ++ + L +LI MYSKCGS+ A EVF+ MP K + +W++MI+ L
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
++G G++A+ F M+R V PD TF GVL AC H V EG + RM++ +GI P
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPI 393
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
HY C+ +L R+ LD+A++ +G +S
Sbjct: 394 PEHYECMTELYARSNNLDEAFKSTKEVGSLANS 426
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 160/312 (51%), Gaps = 13/312 (4%)
Query: 13 EGFYLFEKMRQ-KRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E F +R+ IPT + F C+ IK C C L+ G H + G++ D + +
Sbjct: 1125 EALRAFSSLRKLGLIPTRSSFPCT--IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSA 1182
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+D+YS + +A LFDEIP R+ V+W +I+ Y++N++ +AL LF + EE+ +
Sbjct: 1183 LIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVE 1242
Query: 131 P------DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
D V + VL AC+ + E +H ++ + G+ + + N+L+ Y+KCG
Sbjct: 1243 DGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQP 1302
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSA 243
++ +VF M EKD +SW++MI+ A +G +A+E F M R GV + T + VL A
Sbjct: 1303 LVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 1362
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+H G + G D++ K + N+ ++D+ + G ++ A + M K +
Sbjct: 1363 CAHAGALRAGKCIHDQVIK-MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK-NVK 1420
Query: 304 IWRTLLGACRIH 315
W ++ +H
Sbjct: 1421 SWTAMVAGYGMH 1432
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 160/354 (45%), Gaps = 47/354 (13%)
Query: 16 YLFEKMRQKRIPTNPFA------CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
Y + K IP P F ++ C F L QIHA+++R G D L
Sbjct: 7 YTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTR 63
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
L+ LYST + A LF +I T WN++I N + AL L+ N+ + G
Sbjct: 64 KLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GI 121
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
D T V++AC + +++ G+ +H + ++G+ + + N+LI Y KCG A +
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 190 VFKGMPEKDVVSWSAMISGL--------------------------AMNGHGR-----DA 218
VF+ M ++VVSW+ +ISGL +NG+ R +A
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+E F MQ +FP++ T ++ AC+ G++ G D K+ I ++ ++D
Sbjct: 242 LELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKN-CIEIGVYLGTALID 300
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ + G + A ++ +M K T W +++ + +H LG+ + E++
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVHG---LGQEALNLFSEME 350
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 284/442 (64%), Gaps = 3/442 (0%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
++G L +LR +D+ TL+ Y+ + +A LFDE+P R+ V+W+ ++
Sbjct: 256 AGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMV 315
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ Y++ R+AL LF + + G +PDD + VL ACA LG LE G+ +H Y+ +
Sbjct: 316 NGYVQAGDGREALGLFARM--QADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANN 373
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ L +L+ MY+KCG + +A EVFK M EK+V++W+ MI GLAM+G G +A+E F
Sbjct: 374 IRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFS 433
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+R GV PDD F G L AC+H GLVD+G D M + +GI P I HYGC+VDLL R
Sbjct: 434 QMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARN 493
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
GLL++A +++ M +KPD+ IW L+ CR HK+V L E V++H IEL+ +SG YVLL
Sbjct: 494 GLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLG 553
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y++ G +E+R M EKG+ TPGCST+ +KGV+H+F+V D+SHP I EI D
Sbjct: 554 NIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWD 613
Query: 404 EINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNL 462
EI+ ++++ GYV + L ++ EEK NALS HSEK+AIAF ++ T IR+ KNL
Sbjct: 614 EIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKNL 673
Query: 463 RICVDCHNFAKVLSGVYNREVI 484
R+C DCH+ K++S V++ V+
Sbjct: 674 RVCHDCHHVTKLISKVFDLTVV 695
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + E LF +M+ + + + C + L G +H + +
Sbjct: 314 MVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANN 373
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ L T L+D+Y+ + A ++F + +++ +AW +I + R +AL LF
Sbjct: 374 IRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFS 433
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G KPDD+ + L AC H G ++ G E + ++G K+ ++ + +
Sbjct: 434 QMER--LGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 491
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A E+ + MP K D + W A+++G
Sbjct: 492 RNGLLNEAREMVEKMPMKPDALIWGALMAG 521
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/494 (41%), Positives = 303/494 (61%), Gaps = 3/494 (0%)
Query: 13 EGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E F LF+ M + + + + + A++ C L G Q+HA + + G D +L
Sbjct: 288 EAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSL 347
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ EA LFDEI +DT+++ L+S Y++N + +A +F + + +P
Sbjct: 348 LSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM--QACNVQP 405
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T + ++ AC+HL AL+ G H + G + ++CNSLI MY+KCG + ++ +VF
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP +D+VSW+ MI+G ++G G++A F +M+ G PDD TF +++ACSH GLV
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVT 525
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + D M+ +GILP + HY C+VDLL R G LD+AYQ I SM +K D +W LLGA
Sbjct: 526 EGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGA 585
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIHK++ LG++V + +L + +G++VLL N++S+ G +++ E+R KG + +P
Sbjct: 586 CRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 645
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS I + G +H FV D SHP +IY LD I +K GY A+ + L +L EEK
Sbjct: 646 GCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKE 705
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
AL YHSEKLAIAFGVL+ TI V KNLR+C DCH K ++ V NR +I+RD RF
Sbjct: 706 KALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRF 765
Query: 492 HHFREGRCSCNDYW 505
HHF+ G+CSC D+W
Sbjct: 766 HHFKNGQCSCGDFW 779
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 7/313 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAYS L+ M R+P N + F +K C L G IHA G
Sbjct: 70 LIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVG 129
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + T L+DLY + A +F ++P RD VAWN +++ Y + A+
Sbjct: 130 LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 189
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS---KMNLCNSLIAM 177
++ ++ G +P+ T + +L A GAL G +H Y ++ + +L+ M
Sbjct: 190 DM-QDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDM 248
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQT 236
Y+KC L A VF GM ++ V+WSA+I G + +A F M G+ F +
Sbjct: 249 YAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L C+ + G ++K GI ++ ++ + +AGL+++A L +
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKS-GIHADLTAGNSLLSMYAKAGLINEATMLFDEI 367
Query: 297 GVKPDSTIWRTLL 309
+K D+ + LL
Sbjct: 368 AIK-DTISYGALL 379
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 39/362 (10%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD IP D A+N LI Y A+ L+ ++ P+ T VL+AC
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR--VPPNKYTFPFVLKAC 109
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ L L G IH + + G + + + +LI +Y +C G A VF MP +DVV+W+
Sbjct: 110 SALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWN 169
Query: 204 AMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGM-------- 254
AM++G A +G AI MQ R G+ P+ T +L + G + +G
Sbjct: 170 AMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR 229
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+LD+ + I ++D+ + L A ++ M V+ + T W L+G +
Sbjct: 230 AYLDQNEEQVLI------GTALLDMYAKCKHLVYACRVFHGMTVRNEVT-WSALIGGFVL 282
Query: 315 HKHVT-----LGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
+T + ++E + L A L + +S+ D +L + + G+
Sbjct: 283 CDRMTEAFNLFKDMLVEGMCFLSATSVAS---ALRVCASLADLRMGTQLHALLAKSGIHA 339
Query: 370 --TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
T G S + + INE + DEI + I+ Y A ++ + N A
Sbjct: 340 DLTAGNSLLSMYA----------KAGLINEATMLFDEIAIKDTIS-YGALLSGYVQNGKA 388
Query: 428 EE 429
EE
Sbjct: 389 EE 390
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 316/540 (58%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR-VLRD 59
++R Y++ E L+ MR++ I F + +K C + G Q+H + +L
Sbjct: 110 LIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIG 169
Query: 60 GYQLDSQLMTTLMDLY----------STFEKSFE---------------------ACKLF 88
G+ D + TL+D+Y F++ + A +LF
Sbjct: 170 GFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELF 229
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D +P +D VAW +++ Y +N R R+AL +F+ + + +G K D+VT + V+ ACA LGA
Sbjct: 230 DGLPMKDMVAWTAMVTGYAQNARPREALEVFERM--QAAGVKTDEVTLVGVISACAQLGA 287
Query: 149 LEFGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
++ + + G+G N+ ++LI MY+KCGS+ A++VF+ M E++V S+S+MI
Sbjct: 288 AKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMI 347
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G AM+G A+E F M + + P+ TF GVL+ACSH G+V++G M + G+
Sbjct: 348 VGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGV 407
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P+ HY C+VDLLGRAG L++A L+ M + P +W LLGACRIH + + +
Sbjct: 408 APSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAAS 467
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI-GLKGVVHEF 385
HL EL+ G+Y+LL N+Y+S G W+ V ++R+ M KGL+ PGCS + G KG++HEF
Sbjct: 468 HLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEF 527
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
D+SHP+ EI Q L+++ +LK GY ++S +++ EEK L HSEKLA+AF
Sbjct: 528 FAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAF 587
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L T G TIR+ KNLRIC DCH+ S + RE+++RD +RFHHFR+GRCSC ++W
Sbjct: 588 GLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 37/281 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK--LFDEIPQRDTVAWNVLISCYIR 108
Q+HA + R G + ++ L+ + + + +F ++ + W LI Y
Sbjct: 57 QVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYAL 116
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-RYISEHGYGSK 167
+++ L++++ R+ G P T +L+AC+ + G ++H + I G+GS
Sbjct: 117 QGPFMESVLLYNSMRRQ--GIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSD 174
Query: 168 MNLCNSLIAMYSKCGSLG-------------------------------MAFEVFKGMPE 196
+ + N+LI MY KCG LG A E+F G+P
Sbjct: 175 LYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPM 234
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
KD+V+W+AM++G A N R+A+E F MQ AGV D+ T GV+SAC+ G
Sbjct: 235 KDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWV 294
Query: 257 LDRMSKD-FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
D + FG N+ ++D+ + G ++ AY++ M
Sbjct: 295 RDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERM 335
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 15/236 (6%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE-----VFKG 193
VL C H+ ++ ++H +I G C L + L + + VF+
Sbjct: 45 VLHGCTHINQVK---QVHAHIFRKGLE---QCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ + W+A+I G A+ G +++ + +M+R G+ P TFT +L ACS V+ G
Sbjct: 99 VEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
+ G +++ ++D+ + G L +++ M + D W +L+ A
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLIVA-- 215
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
+ V E E L ++ + ++ Y+ + E+ E M G++T
Sbjct: 216 -YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKT 270
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/513 (40%), Positives = 302/513 (58%), Gaps = 9/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP----TNPFACSFAIKCCMKFCSLMGGLQI---- 52
M+ Y + + LF+ ++ N S + + CS + G I
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGV 2146
Query: 53 HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
H V++ G+ + TLMD Y+ + + K+FD + ++D ++WN +I+ Y ++ +
Sbjct: 2147 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 2206
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+AL +F + R G + + VT VL ACAH GAL G+ IH + + + +
Sbjct: 2207 GEALEVFHGMVRH-VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
S+I MY KCG + MA + F M EK+V SW+AM++G M+G ++A++ F M RAGV P
Sbjct: 2266 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 2325
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF VL+ACSH GLV+EG + + M + I P I HYGC+VDL GRAG L++AY L
Sbjct: 2326 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 2385
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I M +KPD +W +LLGACRIHK+V LGE + L EL G YVLL NLY+ G W
Sbjct: 2386 IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRW 2445
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
V+ +R M + L PG S + LKG VH F+V D HP IY+ L+++ +L+
Sbjct: 2446 ADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKI 2505
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV +TS LH++ EEK L HSEKLA+AFGV+ + PGTTI + KNLR+C DCH
Sbjct: 2506 GYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVI 2565
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + +R+ ++RD RFHHF++G CSC DYW
Sbjct: 2566 KLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 171/328 (52%), Gaps = 33/328 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA +++ E+ L++ M + I + F F IK C F S+ G +H +++ G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 YQLDSQLMTTLMDLY----------STFEKSF---------------------EACKLFD 89
+ D + L+D Y FEK EA ++FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP ++ V+W +I+ YIRNQ+ +AL LF + E P++ T + +++AC +G L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE--NIFPNEYTMVSLIKACTEMGIL 273
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
G IH Y ++ + L +LI MYSKCGS+ A EVF+ MP K + +W++MI+ L
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
++G G++A+ F M+R V PD TF GVL AC H V EG + RM++ +GI P
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPI 393
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMG 297
HY C+ +L R+ LD+A++ +G
Sbjct: 394 PEHYECMTELYARSNNLDEAFKSTKEVG 421
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 160/312 (51%), Gaps = 13/312 (4%)
Query: 13 EGFYLFEKMRQ-KRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E F +R+ IPT + F C+ IK C C L+ G H + G++ D + +
Sbjct: 1998 EALRAFSSLRKLGLIPTRSSFPCT--IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSA 2055
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+D+YS + +A LFDEIP R+ V+W +I+ Y++N++ +AL LF + EE+ +
Sbjct: 2056 LIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVE 2115
Query: 131 P------DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
D V + VL AC+ + E +H ++ + G+ + + N+L+ Y+KCG
Sbjct: 2116 DGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQP 2175
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSA 243
++ +VF M EKD +SW++MI+ A +G +A+E F M R GV + T + VL A
Sbjct: 2176 LVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 2235
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+H G + G D++ K + N+ ++D+ + G ++ A + M K +
Sbjct: 2236 CAHAGALRAGKCIHDQVIK-MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK-NVK 2293
Query: 304 IWRTLLGACRIH 315
W ++ +H
Sbjct: 2294 SWTAMVAGYGMH 2305
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 44/337 (13%)
Query: 16 YLFEKMRQKRIPTNPFA------CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
Y + K IP P F ++ C F L QIHA+++R G D L
Sbjct: 7 YTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTR 63
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
L+ LYST + A LF +I T WN++I N + AL L+ N+ + G
Sbjct: 64 KLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GI 121
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
D T V++AC + +++ G+ +H + ++G+ + + N+LI Y KCG A +
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 190 VFKGMPEKDVVSWSAMISGL--------------------------AMNGHGR-----DA 218
VF+ M ++VVSW+ +ISGL +NG+ R +A
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+E F MQ +FP++ T ++ AC+ G++ G D K+ I ++ ++D
Sbjct: 242 LELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKN-CIEIGVYLGTALID 300
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + G + A ++ +M K T W +++ + +H
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVH 336
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/506 (40%), Positives = 304/506 (60%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y S +E LF++M K + P ++ C K L G ++H +++
Sbjct: 282 MIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G LD L TL+ +Y+ +A + FDE+ +D+V+++ ++S ++N AL +F
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + SG PD T L VL AC+HL AL+ G H Y+ G+ + +CN+LI MYS
Sbjct: 402 RMM--QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A EVF M D+VSW+AMI G ++G G +A+ F + G+ PDD TF
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LS+CSH GLV EG ++ D MS+DF I+P + H C+VD+LGRAGL+D+A+ I +M +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IW LL ACRIHK++ LGE V + + L + +G++VLL N+YS+ G W+ +R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ GL+ PGCS I + G+VH FV D SH ++++I + L+E+ ++K GY AE +
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
++ EEK L YHSEKLAIAFG+L G I V KNLR+C DCH K ++ +
Sbjct: 700 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLIT 759
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHF+ G C+C D+W
Sbjct: 760 KREITVRDANRFHHFKNGTCNCGDFW 785
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C++ SL +IH L++ DS ++ L LY + + A +LFDEIP
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+ WN +I Y N A+ L+ ++ G +P+ T VL+AC+ L A+E G +IH
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSM--LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G S + +C +L+ Y+KCG L A +F M +DVV+W+AMI+G ++ G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHY 273
DA++ MQ G+ P+ T GVL + G + R S D G++
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG-- 250
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++D+ + L A ++ MGV+ + + W ++G
Sbjct: 251 --LLDMYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGG 285
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 40/348 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ + + L+ M + N + F +K C ++ G++IH+ G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+D Y+ EA +LF + RD VAWN +I+ DA+ L
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI- 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G P+ T + VL AL G+ +H Y + + + + L+ MY+K
Sbjct: 199 -MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTG 239
C L A ++F M ++ VSWSAMI G + ++A+E F M + + P T
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGS 317
Query: 240 VLSAC-----------------------------------SHCGLVDEGMMFLDRMSKDF 264
VL AC + CG++D+ + F D M+
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKD 377
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ + GCV + G A + ++++ G+ PD T +L AC
Sbjct: 378 SVSFSAIVSGCVQN--GNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L +L+AC +L +KIH++ ++ + ++ + L +Y C + +A +F +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
V+ W+ +I A NG AI+ + +M GV P+ T+ VL ACS +++G+
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE- 130
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ +K FG+ ++ +VD + G+L +A +L +SM + D W ++ C ++
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 294/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + + E LF +++Q + N + SL G IH V G
Sbjct: 278 VITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAG 337
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D+ + T LM LY E +A K+F ++ +D + W V+ Y +N ++AL LF
Sbjct: 338 YDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQ 397
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G +P T + VL CAHL AL+ G +IH +I E+ + +M + +LI MY K
Sbjct: 398 EMQLE--GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGK 455
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A VF+ M ++D++ W++M+ A +G+ + ++ F MQ GV D +F V
Sbjct: 456 CGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSV 515
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM-GVK 299
LSA SH G V +G + M +DF I P YGCVVDLLGRAG + +A ++ + G
Sbjct: 516 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL 575
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD +W TLLGACR H + E ++E SG YV+L N+Y++ GDW+ V +R
Sbjct: 576 PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMR 635
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M +G++ PG S+I + VHEF+ D SHPR + IY LD +N +++ AGY+ +
Sbjct: 636 KLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTK 695
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E K + L YHSE+LAIAFG+++TPPGT +RV KNLR+C DCH K +S +
Sbjct: 696 MILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLR 755
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH+F++GRCSC DYW
Sbjct: 756 GREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 9/321 (2%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G ++H V G++ ++ + L+ +Y+ EA ++F+ + ++D AW +I Y +
Sbjct: 23 GRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ 82
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
AL +F + E+ P VT + +L ACA +L+ G +IH I + G+ +
Sbjct: 83 QGDYDRALGMFYQMQEED--VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 140
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ +LI MY+KCGS+ A++ FK + +DVVSW+AMI+ + A + MQ
Sbjct: 141 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 200
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL-PNIHHYGCVVDLLGRAGLLD 287
GV P+ T V +A + EG +S G++ ++ V++ G AGLL
Sbjct: 201 GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSS--GVMESDVRVMNSAVNMFGNAGLLG 258
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE--LKAQESGDYVLLLNL 345
A +L M V D W ++ +++ R+ L + +KA + +VL+LN+
Sbjct: 259 DARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDI-TFVLMLNV 316
Query: 346 YSSVGDWEKVKELREFMNEKG 366
Y+S+ K K + E + E G
Sbjct: 317 YTSLTSLAKGKVIHELVKEAG 337
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 144/308 (46%), Gaps = 4/308 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +F +M+++ + + C SL G++IH ++L+ G
Sbjct: 76 MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 135
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + T L+++Y+ A F + RD V+W +I+ +++ + A L+
Sbjct: 136 FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 195
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G P+ +T V A L G+ ++ +S S + + NS + M+
Sbjct: 196 RMQLD--GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGN 253
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G LG A +F+ M ++DVV+W+ +I+ N + +A+ FG +Q+ GV +D TF +
Sbjct: 254 AGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLM 313
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ + + +G + + + K+ G + ++ L GR QA+++ MG K
Sbjct: 314 LNVYTSLTSLAKGKV-IHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSK- 371
Query: 301 DSTIWRTL 308
D W +
Sbjct: 372 DVITWTVM 379
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
KPD + +LQ C+ ++ G ++H ++ + G+ +C LI MY++CGS+ A +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF+ + KDV +W+ MI G A+ F MQ V P T+ +L+AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ +GM ++ + G ++ ++++ + G + A+ + + D W ++
Sbjct: 121 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 178
Query: 310 GACRIHKHVTLG 321
AC H L
Sbjct: 179 AACVQHDQFALA 190
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/493 (41%), Positives = 300/493 (60%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E +F ++ + + + F+ + C + L G I + +G + + T L+
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALV 251
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D Y A +FD + +++ V+W+ +I Y N ++AL LF + E G KPD
Sbjct: 252 DFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNE--GLKPD 309
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ VL +CA LGALE G+ I+ + + L +LI MY+KCG + A+EVF+
Sbjct: 310 CYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFR 369
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
GM +KD V W+A ISGLAM+GH +DA+ FG M+++G+ PD TF G+L AC+H GLV+E
Sbjct: 370 GMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEE 429
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + + M F + P I HYGC+VDLLGRAG LD+A+QLI SM ++ ++ +W LLG C
Sbjct: 430 GRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+H+ L E V++ LI L+ SG+YVLL N+Y++ WE+ ++R M+E+G++ PG
Sbjct: 490 RLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPG 549
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I + GVVH+F+V D SHP +IY L E+ K LK AGYV L ++ EEK +
Sbjct: 550 YSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEH 609
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
+ HSEKLA+AFG+++T P I V KNLR+C DCH K +S + RE+I+RD RFH
Sbjct: 610 FIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFH 669
Query: 493 HFREGRCSCNDYW 505
F +G CSC DYW
Sbjct: 670 CFTDGLCSCKDYW 682
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 168/318 (52%), Gaps = 4/318 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R ++ +E ++ MR++ + + F F +K C + G+++H+ V++ G
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + +L++LY+ A K+FD+IP ++ +W IS Y+ + R+A+ +F
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G +PD + + VL AC G L GE I YI+E+G + + +L+ Y K
Sbjct: 199 RL--LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGK 256
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A VF GM EK++VSWS+MI G A NG ++A++ F M G+ PD GV
Sbjct: 257 CGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGV 316
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +C+ G ++ G + ++ + L N ++D+ + G +D+A+++ M K
Sbjct: 317 LCSCARLGALELGDWASNLINGN-EFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR-KK 374
Query: 301 DSTIWRTLLGACRIHKHV 318
D +W + + HV
Sbjct: 375 DRVVWNAAISGLAMSGHV 392
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 135/259 (52%), Gaps = 4/259 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
IHA +LR G D+ L+ ++ F + + ++ D+ + + +N +I + N
Sbjct: 28 HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLND 87
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
++++ ++ ++ +E G PD T VL+ACA + E G K+H + + G + +
Sbjct: 88 CFQESIEIYHSMRKE--GLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFV 145
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SLI +Y+KCG + AF+VF +P+K+ SW+A ISG G R+AI+ F + G+
Sbjct: 146 KISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGL 205
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD + VLSAC G + G ++D + G++ N+ +VD G+ G +++A
Sbjct: 206 RPDSFSLVEVLSACKRTGDLRSG-EWIDEYITENGMVRNVFVATALVDFYGKCGNMERAR 264
Query: 291 QLITSMGVKPDSTIWRTLL 309
+ M ++ + W +++
Sbjct: 265 SVFDGM-LEKNIVSWSSMI 282
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/502 (40%), Positives = 303/502 (60%), Gaps = 2/502 (0%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
Y+ +S P + L+ +M + + F + C + SL G +IH LR+G +
Sbjct: 284 GYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV 343
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D + +L+ LY K F A LFD + R V+WNV+I+ Y +N +A+ LF +
Sbjct: 344 DPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQML 403
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ G +P ++ + V AC+ L AL G+++H + + + + +S+I MY+K G
Sbjct: 404 SD--GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 461
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+G++ +F + EKDV SW+ +I+G ++G G++A+E F M R G+ PDD TFTG+L A
Sbjct: 462 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 521
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GLV++G+ + ++M I P + HY CVVD+LGRAG +D A +LI M PDS
Sbjct: 522 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 581
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IW +LL +CRIH ++ LGE+V L+EL+ ++ +YVL+ NL++ G W+ V+ +R M
Sbjct: 582 IWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMK 641
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ GLQ GCS I + G VH F++ D P + E+ + + ++ GY + S LH
Sbjct: 642 DIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLH 701
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
+L E+K L HSEKLAI+FG+L T G +RV KNLRIC DCHN AK +S V NR++
Sbjct: 702 DLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDI 761
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFHHFR+G CSC DYW
Sbjct: 762 VVRDNKRFHHFRDGICSCGDYW 783
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 40/324 (12%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T ++ +YS ++ +FD++ +++ WN ++S Y RN+ DA+ +F L
Sbjct: 140 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL- 198
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ KPD+ T V++ACA L L G+ IH ++ S + + N+LIAMY KCG
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258
Query: 184 LGMAFE-VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
+ A + VF M K V SW+A++ G A N R A++ + M +G+ PD T +L
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318
Query: 243 ACS-----HCGLVDEGMMFLDRMSKD--FGI------------------LPNIHH----- 272
ACS H G G + ++ D GI + H
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 378
Query: 273 YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ ++ + GL D+A L M G++P + GAC + LG+ + H
Sbjct: 379 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL--HCF 436
Query: 330 ELKAQESGDYVL---LLNLYSSVG 350
LKA + D + ++++Y+ G
Sbjct: 437 ALKAHLTEDIFVSSSIIDMYAKGG 460
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + P+E LF +M I A C + +L G ++H L+
Sbjct: 382 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 441
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + ++++D+Y+ + ++FD + ++D +WNV+I+ Y + R ++AL LF+
Sbjct: 442 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 501
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G KPDD T +L AC+H G +E G E ++ ++ H K+ ++ M
Sbjct: 502 KMLR--LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLG 559
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G + A + + MP + D WS+++S ++G+
Sbjct: 560 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 595
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHG-YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
++LQAC +E G ++H +S + + L +I MYS CGS + VF +
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGM- 254
K++ W+A++S N DA+ F + PD+ T V+ AC+ GL+D G+
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLG 227
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ M+ ++ ++ ++ + G+ GL+++A + + + + W LL
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 306/505 (60%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R + + EE +++M ++ + + F +K C + ++ G+Q+HA +L+ G
Sbjct: 59 MMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLG 118
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+ +Y + C +F+++ +R +W+ LI+ + D L L
Sbjct: 119 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 178
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+++ E + ++ + VL AC HLGAL+ G +H ++ + G + + SLI MY K
Sbjct: 179 DMS-NEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLK 237
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L +F+ M +K+ +S+S MISGLAM+G+GR+ + F M G+ PDD + GV
Sbjct: 238 CGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGV 297
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG+ +RM + GI P I HYGC+VDL+GRAG +D+A +LI SM ++P
Sbjct: 298 LNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEP 357
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR+LL A ++H ++ GE + L +L +Q++ DYV+L N+Y+ WE V R
Sbjct: 358 NDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRT 417
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KGL PG S + +K +H FV D HP+ +Y+ML ++ QLK GY + T
Sbjct: 418 NMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQ 477
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK LS HS+KLAIA+ ++ T G+ +R+ +NLR+C DCH + K++S +++
Sbjct: 478 VLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFD 537
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RDR RFHHF++G CSC DYW
Sbjct: 538 REITVRDRHRFHHFKDGACSCRDYW 562
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 50/355 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDL--YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
Q HAR+L+ G DS + L+ S + AC +F ++ + + +N ++ +++
Sbjct: 6 QSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVK 65
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ T +AL + + E G KPD+ T +L+ACA L A+E G ++H +I + G + +
Sbjct: 66 DMNTEEALITYKEM--AERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDV 123
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ NSLI+MY KCG +G+ VF+ M E+ V SWSA+I+ A G D + G M
Sbjct: 124 FVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNE 183
Query: 229 GVF-PDDQTFTGVLSACSH-----------------------------------CGLVDE 252
G + ++ VLSAC+H CG + +
Sbjct: 184 GYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYK 243
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
GM +M+K + ++ G + GR GL + + + G++PD ++ +L AC
Sbjct: 244 GMCLFQKMAKKNKLSYSVMISGLAMHGYGREGL--RIFTEMLEQGLEPDDIVYVGVLNAC 301
Query: 313 RIHKHVTLGERV-----IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFM 362
V G + +EH IE Q G +++L G ++ EL + M
Sbjct: 302 SHAGLVQEGLQCFNRMKLEHGIEPTIQHYG---CMVDLMGRAGKIDEALELIKSM 353
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 284/442 (64%), Gaps = 3/442 (0%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
++G L +LR +D+ TL+ Y+ + +A LFDE+P R+ V+W+ ++
Sbjct: 256 AGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMV 315
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ Y++ R+AL LF + + G +PDD + VL ACA LG LE G+ +H Y+ +
Sbjct: 316 NGYVQAGDGREALGLFARM--QADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANN 373
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ L +L+ MY+KCG + +A EVFK M EK+V++W+ MI GLAM+G G +A+E F
Sbjct: 374 IRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFS 433
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+R GV PDD F G L AC+H GLVD+G D M + +GI P I HYGC+VDLL R
Sbjct: 434 QMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARN 493
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
GLL++A +++ M +KPD+ IW L+ CR HK+V L E V++H IEL+ +SG YVLL
Sbjct: 494 GLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLG 553
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y++ G +E+R M EKG+ TPGCST+ +KGV+H+F+V D+SHP I EI D
Sbjct: 554 NIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWD 613
Query: 404 EINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNL 462
EI+ ++++ GYV + L ++ EEK NALS HSEK+AIAF ++ T IR+ KNL
Sbjct: 614 EIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKNL 673
Query: 463 RICVDCHNFAKVLSGVYNREVI 484
R+C DCH+ K++S V++ V+
Sbjct: 674 RVCHDCHHVTKLISKVFDLTVV 695
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + E LF +M+ + + + C + L G +H + +
Sbjct: 314 MVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANN 373
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ L T L+D+Y+ + A ++F + +++ +AW +I + R +AL LF
Sbjct: 374 IRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFS 433
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G KPDD+ + L AC H G ++ G E + ++G K+ ++ + +
Sbjct: 434 QMER--LGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 491
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A E+ + MP K D + W A+++G
Sbjct: 492 RNGLLNEAREMVEKMPMKPDALIWGALMAG 521
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/532 (37%), Positives = 301/532 (56%), Gaps = 33/532 (6%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y S +E F L E+MR++ + N ++ C +L G QIHA + + G++LD
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELD 398
Query: 65 SQLMTTLMDLYSTFEKSFEA------------------------C-------KLFDEIPQ 93
L T + ++Y+ +EA C K+F E+P
Sbjct: 399 RSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT 458
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
R+ V+WN++I+ Y +N L ++ E G +PD VT + +L+AC L LE G+
Sbjct: 459 RNVVSWNLMIAGYAQNGDIVKVFELLSSMKAE--GFQPDRVTVITILEACGALAGLERGK 516
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+H + G S + SLI MYSKCG + A VF M +D V+W+AM++G +G
Sbjct: 517 LVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHG 576
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
G +A++ F M + V P++ T T V+SACS GLV EG M +DF + P HY
Sbjct: 577 DGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHY 636
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
GC+VDLLGRAG L +A + I SM +PD ++W LLGAC+ H +V L ER H++EL+
Sbjct: 637 GCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEP 696
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
+ Y+ L N+Y+ G W+ ++R M+++GL+ G S+I + G +H FV +D +HP
Sbjct: 697 SYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHP 756
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
I+ I+ L+ + K++K AGY ++ LH++ +K AL +HSEKLAIA+G+L TP G
Sbjct: 757 EIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSG 816
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T IR+ KNLR+C DCH K +S + RE++ RD RFH+F G CSC D+W
Sbjct: 817 TPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 191/373 (51%), Gaps = 12/373 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ ++ P + F FE+M I N +K C + L G +IH V G
Sbjct: 128 MIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG 187
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ +YS + AC++F ++ +R+ V+W +I ++++ +A L++
Sbjct: 188 METDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYE 247
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G P+ VT + +L +C AL G +IH +ISE G + M + N+LI MY K
Sbjct: 248 QM--LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK 305
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIES----FGAMQRAGVFPDDQ 235
C S+ A E+F M ++DV+SWSAMI+G A +G+ +++I+ M+R GVFP+
Sbjct: 306 CNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF +L AC+ G +++G +SK G + + ++ + G + +A Q+ +
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSK-VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M K + W + L ++ E+V E+ + + L++ Y+ GD KV
Sbjct: 425 MANK-NVVAWTSFLSMYIKCGDLSSAEKVFS---EMPTRNVVSWNLMIAGYAQNGDIVKV 480
Query: 356 KELREFMNEKGLQ 368
EL M +G Q
Sbjct: 481 FELLSSMKAEGFQ 493
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 53/392 (13%)
Query: 20 KMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
K R + +N + C I+ C K G +H ++ G ++D L +L++ YS FE
Sbjct: 48 KQRGLLVNSNTYGC--VIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFE 105
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A ++F + RD V W+ +I+ Y N A F+ + ++ +P+ +T L +
Sbjct: 106 DVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT--DANIEPNRITFLSI 163
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L+AC + LE G KIH + G + + + +LI MYSKCG + +A EVF M E++V
Sbjct: 164 LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNV 223
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-------------SH 246
VSW+A+I A + +A E + M +AG+ P+ TF +L++C SH
Sbjct: 224 VSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSH 283
Query: 247 ----------------------CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
C V E DRMSK ++ + ++ ++G
Sbjct: 284 ISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK-----RDVISWSAMIAGYAQSG 338
Query: 285 L-----LDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-E 335
+D+ +QL+ M GV P+ + ++L AC H + G ++ L ++ + +
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELD 398
Query: 336 SGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+ N+Y+ G + +++ M K +
Sbjct: 399 RSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + F L M+ + + ++ C L G +HA ++ G
Sbjct: 467 MIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLG 526
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + T+L+ +YS + EA +FD++ RDTVAWN +++ Y ++ +A+ LF
Sbjct: 527 LESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFK 586
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ +E P+++T V+ AC+ G ++ G +I R + E + ++ +
Sbjct: 587 RMLKER--VSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLG 644
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G L A E + MP E D+ W A++
Sbjct: 645 RAGRLQEAEEFIQSMPCEPDISVWHALL 672
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 308/507 (60%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ A+ E+ F L ++M + + + + C + +L G +H+
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + ++ ++D+Y + A ++F+ I ++D ++W ++S ++ ++AL LF
Sbjct: 243 GLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALF 302
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + + + D++T + VL ACA GAL+ G+ IH I + + L +L+ MY+
Sbjct: 303 QKM--QLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYA 360
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGS+ +A +VF+ M ++V +W+A+I GLAM+GHG DAI F M+ + PDD TF
Sbjct: 361 KCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIA 420
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L ACSH GLVDEG+ M F I P + HYGCVVDLL RA +D A I +M +K
Sbjct: 421 LLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIK 480
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
+S +W TLLGACR H L E++ +IEL+ G YV+L NLY+ V W+ +LR
Sbjct: 481 ANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLR 540
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI-AGYVAEI 418
+ M KG++ TPGCS I L G++H+FV D SH + +IY M++E+ +++ + G+V
Sbjct: 541 KQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGT 600
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L ++ EEK ++L HSEKLAIA G+++TP G+ IR+ KNLR+C DCH+F KV S V
Sbjct: 601 ANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKV 660
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
YNRE++ RDR RFHHF+EG CSC D+W
Sbjct: 661 YNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 173/317 (54%), Gaps = 3/317 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ S +P E L+ M ++ +P + + F + C + ++ G + H VL++G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ L+ Y AC +FDE RD V WN++I+ ++ + A L D
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + ++ +PD+VT + ++ ACA LG LE G+ +H Y E G + + N+++ MY K
Sbjct: 202 EMTKLDN-LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + A EVF + EKDV+SW++M+SGLA +G+ ++A+ F MQ + D+ T GV
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGV 320
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+ G +D+G ++ + F I ++ +VD+ + G +D A Q+ M V+
Sbjct: 321 LSACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 379
Query: 301 DSTIWRTLLGACRIHKH 317
T W L+G +H H
Sbjct: 380 VFT-WNALIGGLAMHGH 395
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 9/265 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYI 107
Q HA +LR + L + L ++ + + S + A KLF ++ D N +I Y
Sbjct: 29 QAHALLLRT-HLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R+Q +A+ L+ + E G D+ T VL ACA LGA++ G + H + ++G+GS
Sbjct: 88 RSQNPYEAVSLYYFM--VERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ + N+LI Y CGS G A +VF +DVV+W+ MI+ G A + M +
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205
Query: 228 A-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+ PD+ T ++ AC+ G ++ G FL SK+ G+ N+ ++D+ + +
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKELGLDENLRVNNAILDMYCKCDDI 264
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGA 311
+ A ++ + K D W ++L
Sbjct: 265 ESAQEVFNRIREK-DVLSWTSMLSG 288
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/505 (41%), Positives = 301/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S +E LF +MRQ + N F + ++ C SL G QIH+ VL+ G
Sbjct: 309 MIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG 368
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +MD+Y+ + + KLF+E+P R+ V WN +I Y++ A+ LF
Sbjct: 369 LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFT 428
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E +P +VT VL+A A L ALE G +IH + Y + NSLI MY+K
Sbjct: 429 HM--LEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAK 486
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A F M ++D VSW+AMI G +M+G +A+ F MQ P+ TF GV
Sbjct: 487 CGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGV 546
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS+ GL+ +G + MSKD+ I P I HY C+V LLGR G D+A +LI + +P
Sbjct: 547 LSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQP 606
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WR LLGAC IHK V LG +H++E++ + +VLL N+Y++ G W+ V +R+
Sbjct: 607 SVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRK 666
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+M +K ++ PG S + +GVVH F V D SHP I I ML+ +NK+ + AGYV + +
Sbjct: 667 YMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNA 726
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK L HSE+LA+A+G++ TP +IR+ KNLRIC+DCH K++S V
Sbjct: 727 VLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQ 786
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE++IRD RFHHFR G CSC DYW
Sbjct: 787 REIVIRDINRFHHFRHGVCSCGDYW 811
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 152/309 (49%), Gaps = 4/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ + YS + + ++ ++ NPF + +K + +HA V + G
Sbjct: 107 LAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLG 166
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + T L+D YS A +FD+I +D V+W +++CY N ++L LF+
Sbjct: 167 HHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFN 226
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G KP++ T L++C L A G+ +H + Y + + +L+ +Y+K
Sbjct: 227 QM--RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAK 284
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A +F+ MP+ D++ WS MI+ A + ++A++ F M++ V P++ TF V
Sbjct: 285 SGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASV 344
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ +D G + K FG+ N+ ++D+ + G ++ + +L + +
Sbjct: 345 LQACASSVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Query: 301 DSTIWRTLL 309
D T W T++
Sbjct: 404 DVT-WNTII 411
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Query: 47 MGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
+ G +H +L+ G LD L++ Y +A KLFDE+PQ +T+++ L Y
Sbjct: 52 IAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGY 111
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
R+ + AL + +E P T LL L L L + +H + + G+ +
Sbjct: 112 SRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCW--TLHACVYKLGHHA 169
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ +LI YS G++ +A VF + KD+VSW+ M++ A N ++++ F M+
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 227 RAGVFPDDQTFTGVLSAC 244
G P++ T +G L +C
Sbjct: 230 IMGYKPNNFTISGALKSC 247
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/502 (40%), Positives = 303/502 (60%), Gaps = 2/502 (0%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
Y+ +S P + L+ +M + + F + C + SL G +IH LR+G +
Sbjct: 382 GYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV 441
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D + +L+ LY K F A LFD + R V+WNV+I+ Y +N +A+ LF +
Sbjct: 442 DPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQML 501
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ G +P ++ + V AC+ L AL G+++H + + + + +S+I MY+K G
Sbjct: 502 SD--GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+G++ +F + EKDV SW+ +I+G ++G G++A+E F M R G+ PDD TFTG+L A
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 619
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GLV++G+ + ++M I P + HY CVVD+LGRAG +D A +LI M PDS
Sbjct: 620 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 679
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IW +LL +CRIH ++ LGE+V L+EL+ ++ +YVL+ NL++ G W+ V+ +R M
Sbjct: 680 IWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMK 739
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ GLQ GCS I + G VH F++ D P + E+ + + ++ GY + S LH
Sbjct: 740 DIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLH 799
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
+L E+K L HSEKLAI+FG+L T G +RV KNLRIC DCHN AK +S V NR++
Sbjct: 800 DLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDI 859
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFHHFR+G CSC DYW
Sbjct: 860 VVRDNKRFHHFRDGICSCGDYW 881
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T ++ +YS ++ +FD++ +++ WN ++S Y RN+ DA+ +F L
Sbjct: 33 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL- 91
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ KPD+ T V++ACA L L G+ IH ++ S + + N+LIAMY KCG
Sbjct: 92 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVL 241
+ A +VF+ MPE+++VSW+++I G + NG +++ +F M PD T VL
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
C+ +++GM + ++ G+ + ++D+ + L +A QL+ K +
Sbjct: 212 PVCAGEEDIEKGMA-VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEA-QLLFDKNDKKN 269
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS---SVGDWEKVKEL 358
W +++G + V +++ + A+ D +LN+ + + +KEL
Sbjct: 270 IVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329
Query: 359 REFMNEKGLQTT 370
+ GLQ+
Sbjct: 330 HGYSWRHGLQSN 341
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 150/338 (44%), Gaps = 38/338 (11%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G+ +H ++ G + + +L+D+YS EA LFD+ +++ V+WN +I Y R
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR 282
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ L + E++ K D+ T L VL C L+ +++H Y HG S
Sbjct: 283 EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNE 342
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+ IA Y++CG+L + VF M K V SW+A++ G A N R A++ + M +
Sbjct: 343 LVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS 402
Query: 229 GVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKD--FGI--------------- 266
G+ PD T +L ACS H G G + ++ D GI
Sbjct: 403 GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAA 462
Query: 267 ---LPNIHH-----YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIH 315
+ H + ++ + GL D+A L M G++P + GAC
Sbjct: 463 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 522
Query: 316 KHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVG 350
+ LG+ + H LKA + D + ++++Y+ G
Sbjct: 523 SALRLGKEL--HCFALKAHLTEDIFVSSSIIDMYAKGG 558
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 6/333 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK--RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ FYL +KM+ + ++ + F + C++ L ++H R
Sbjct: 276 MIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWR 335
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G Q + + + Y+ + ++FD + + +WN L+ Y +N R AL L
Sbjct: 336 HGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDL 395
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ L +SG PD T +L AC+ + +L +GE+IH + +G + SL+++Y
Sbjct: 396 Y--LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 453
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
CG A +F GM + +VSW+ MI+G + NG +AI F M G+ P +
Sbjct: 454 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIM 513
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
V ACS + G L + + +I ++D+ + G + + ++ +
Sbjct: 514 CVCGACSQLSALRLGKE-LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE 572
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
K D W ++ IH + E ++ L
Sbjct: 573 K-DVASWNVIIAGYGIHGRGKEALELFEKMLRL 604
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 42/282 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI---------------------------------P 27
++ YSM SP + +F+K+R+K + P
Sbjct: 40 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 99
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
N F IK C L G IH + D + L+ +Y EA K+
Sbjct: 100 DN-FTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKV 158
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F+ +P+R+ V+WN +I + N +++ F + E PD T + VL CA
Sbjct: 159 FEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEE 218
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
+E G +H + G ++ + NSLI MYSKC L A +F +K++VSW++MI
Sbjct: 219 DIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIG 278
Query: 208 GLAMNGHGRDAIESFGAMQR-----AGVFPDDQTFTGVLSAC 244
G A D +F +Q+ A + D+ T VL C
Sbjct: 279 GYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + P+E LF +M I A C + +L G ++H L+
Sbjct: 480 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 539
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + ++++D+Y+ + ++FD + ++D +WNV+I+ Y + R ++AL LF+
Sbjct: 540 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 599
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G KPDD T +L AC+H G +E G E ++ ++ H K+ ++ M
Sbjct: 600 KMLR--LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLG 657
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G + A + + MP + D WS+++S ++G+
Sbjct: 658 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 693
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHG-YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
++LQAC +E G ++H +S + + L +I MYS CGS + VF +
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGM- 254
K++ W+A++S N DA+ F + PD+ T V+ AC+ GL+D G+
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLG 120
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ M+ ++ ++ ++ + G+ GL+++A ++ M
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/487 (43%), Positives = 288/487 (59%), Gaps = 19/487 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + +Q+HA VLR G D +L+TTL+D Y+ A K+F
Sbjct: 110 DALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVF 169
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------NREESGCKPDDVTCLLVL 140
DE+ RD WN L++ + AL LF L +REE P++VT + L
Sbjct: 170 DEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREE----PNEVTIVAAL 225
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD-- 198
ACA +G L+ G +H + G + +CNSLI MYSKCGSL A +VF + +D
Sbjct: 226 SACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQT 285
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+VS++A I +M+GHG DA+ F M + PD T+ VL C+H GLVD+G+ +
Sbjct: 286 LVSYNAAIQAHSMHGHGGDALRLFDEMP-TRIEPDGVTYLAVLCGCNHSGLVDDGLRVFN 344
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M + PN+ HYG +VDLLGRAG L +AY + SM D +W+TLLGA ++H V
Sbjct: 345 SMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVV 400
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L E L EL + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 401 ELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEI 460
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
GV+H+F+ D HPR EIY+ L++I ++ GY E ++ LH++G EEK AL YHS
Sbjct: 461 DGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHS 520
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG++ATPPG T+RV KNLRIC DCH AK++S Y R ++IRDR RFH F +G+
Sbjct: 521 EKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQ 580
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 581 CSCRDYW 587
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD ++ L+A A ++H + G + + L +L+ Y+KCG L A +
Sbjct: 108 RPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARK 167
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF--------PDDQTFTGVL 241
VF M +DV +W+++++GLA A+ F + A F P++ T L
Sbjct: 168 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL--ANSFQELPSREEPNEVTIVAAL 225
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SAC+ GL+ +G M++ +K FG+ N+ ++D+ + G L +A + S +KP+
Sbjct: 226 SACAQIGLLKDG-MYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHS--IKPE 282
Query: 302 STIWRTLLGACRIH 315
+ A + H
Sbjct: 283 DQTLVSYNAAIQAH 296
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/505 (40%), Positives = 297/505 (58%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LFE+M ++ I + + + + CC + L G ++H + +
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEND 427
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LMD+Y+ EA +F E+ +D ++WN +I Y +N +AL LF
Sbjct: 428 MGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLF- 486
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
NL E PD+ T VL ACA L A + G +IH YI +GY S ++ NSL+ MY+K
Sbjct: 487 NLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L +A +F + KD+VSW+ MI+G M+G G++AI F M++AG+ PD+ +F +
Sbjct: 547 CGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSL 606
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLVDEG F + M + I P + HY C+VD+L R G L +AY+ I +M + P
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPP 666
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L ERV E + EL+ + +G YVL+ N+Y+ WE+VK LR+
Sbjct: 667 DATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRK 726
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ ++GL+ PGCS I +KG V+ FV D S+P +I L + ++ GY
Sbjct: 727 RIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKY 786
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + EK AL HSEKLA+A G++++ G IRV KNLR+C DCH AK +S +
Sbjct: 787 ALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTR 846
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC +W
Sbjct: 847 REIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 6/296 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF+KM + + + S K S+ GG Q+H +L+ G+ + + +L+ Y
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYL 241
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ A K+FDE+ +RD ++WN +I+ Y+ N L +F + SG + D T
Sbjct: 242 KNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF--VQMLFSGIEIDLATI 299
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ V CA + G +H + + + + CN+L+ MYSKCG L A VF+ M
Sbjct: 300 VSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSG 359
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+ VVS+++MI+G A G +A++ F M+ G+ PD T T VL+ C+ L+DEG
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRV 419
Query: 257 LDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ + + D G +I ++D+ + G + +A + + M VK D W T++G
Sbjct: 420 HEWIKENDMGF--DIFVSNALMDMYAKCGSMREAELVFSEMRVK-DIISWNTVIGG 472
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 45/340 (13%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+P ++ C SL G ++ + +G+ LDS L + L +Y+ EA ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++ + WN+L++ ++ ++ LF + SG + D T V ++ + L +
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKM--MSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+ GE++H YI + G+G + ++ NSL+A Y K + A +VF M E+DV+SW+++I+G
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC------------------------ 244
NG + F M +G+ D T V + C
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330
Query: 245 -----------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
S CG +D + MS ++ Y ++ R GL +A +L
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSG-----RSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 294 TSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
M G+ PD +L C ++ + G+RV E + E
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKE 425
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 310/557 (55%), Gaps = 53/557 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV Y+ S F LF+ MR++ IP + S I
Sbjct: 331 MVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG 390
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRD------------GYQLDSQLMTTLMD 73
C +L G++ HA L+ G D + L+D
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALID 450
Query: 74 LYSTFEKSFEACK-LFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
+YS +SF+A + +F+ IP +R+ V W V+I Y + + DAL LF + +
Sbjct: 451 MYSKC-RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVA 509
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMN-LCNSLIAMYSKCGSLGMAF 188
P+ T +L ACAHL +L G++IH Y++ H Y S + + N LI MYSKCG + A
Sbjct: 510 PNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTAR 569
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF MP+++ VSW++M+SG M+G G++A++ F MQ+AG PDD +F +L ACSH G
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSG 629
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
+VD+G+ + D M D+G++ + HY CV+DLL R+G LD+A++ I M ++P + IW L
Sbjct: 630 MVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVAL 689
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACR+H +V L E + L+ +KA+ G Y L+ N+Y++ W+ V +R+ M + G++
Sbjct: 690 LSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIK 749
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PGCS + K F V D SHP EIY +L+ + ++K+ GYV E LH++ E
Sbjct: 750 KRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDE 809
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK N L+ HSEKLA+A+G+L T PG IR+ KNLR+C DCH+ +S + + E+I+RD
Sbjct: 810 EKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDS 869
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF+ G CSC YW
Sbjct: 870 SRFHHFKNGSCSCGGYW 886
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 200/479 (41%), Gaps = 109/479 (22%)
Query: 22 RQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
R R T P F +A+K C + S G H + +G++ + + L+ +YS
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSG 198
Query: 80 KSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNL----NREESGCKPD 132
+A +FDEI ++ D ++WN +++ +++ R AL LF + + + + + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSD 258
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
++ + +L ACA L AL ++IH Y +G + +CN+LI Y+KCGS+ A VF
Sbjct: 259 IISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFN 318
Query: 193 GMPEKDVVSWSAM-----------------------------------ISGLAMNGHGRD 217
M KDVVSW+AM I+G A G+G++
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQE 378
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM----------------------- 254
A+++F M G P+ T +LSAC+ G + +GM
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438
Query: 255 --------MFLDRMSK---------DFGILP----NIHHYGCVVDLLGRAGLLDQAYQLI 293
+D SK F +P N+ + ++ + G + A +L
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498
Query: 294 TSM-----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNL 345
+ M V P++ +L AC + +G+++ ++ ES Y + L+++
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558
Query: 346 YSSVGDWEKVKELREFMNEKG-LQTTPGCSTIGLKGVVHE------------FVVDDVS 391
YS GD + + + + M ++ + T S G+ G E FV DD+S
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDIS 617
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y L T ++ Y + +A + + + V WN+L+ +I R A+ +
Sbjct: 79 YVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSC 138
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G KPD T L+AC L + G H I +G+ S + +CN+L+AMYS+
Sbjct: 139 RMLR--AGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSR 196
Query: 181 CGSLGMAFEVFKGMPEK---DVVSWSAMISGLAMNGHGRDAIESFGAM 225
GSL A VF + K DV+SW+++++ + R A++ F M
Sbjct: 197 SGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEM 244
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 80/210 (38%), Gaps = 9/210 (4%)
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ H Y S +L ++A Y CG+ A V + + V W+ ++ G A
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRA 133
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
I M RAG PD T L AC G F + + G N+ +V
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCN-GFESNVFVCNALVA 192
Query: 279 LLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGA----CRIHKHVTLGERVIEHLIEL 331
+ R+G L+ A + IT G+ D W +++ A + L + + E
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGID-DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEK 251
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREF 361
E D + ++N+ + + + + +E
Sbjct: 252 ATNERSDIISIVNILPACASLKALPQTKEI 281
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 302/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS E LF +M ++ I N S +K + Q+H ++ G
Sbjct: 431 IISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG 490
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ +L+D Y +A ++F+E D V++ +I+ Y + + +AL LF
Sbjct: 491 FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF- 549
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L ++ KPD C +L ACA+L A E G+++H +I ++G+ + NSL+ MY+K
Sbjct: 550 -LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAK 608
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F + E+ +VSWSAMI GLA +GHGR A++ F M + GV P+ T V
Sbjct: 609 CGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSV 668
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H GLV E ++ + M + FG P HY C++DLLGRAG +++A +L+ M +
Sbjct: 669 LGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEA 728
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++++W LLGA RIHK V LG R E L L+ ++SG +VLL N+Y+S G WE V E+R
Sbjct: 729 NASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRR 788
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ PG S I +K V+ F+V D SH R EIY LDE++ + AGYV +
Sbjct: 789 LMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEI 848
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH++ EK L +HSEKLA+AFG++ATP G IRV KNLR+CVDCH K + + +
Sbjct: 849 DLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVS 908
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 909 REIIVRDINRFHHFKDGSCSCGDYW 933
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + F +M + N F S +K C L G Q+H V+ G
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + TL+ +Y+ ++ ++ +LFDEIP+R+ V+WN L SCY++ +A+ LF
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFY 247
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG KP++ + ++ AC L G+ IH Y+ + GY N+L+ MY+K
Sbjct: 248 EMVL--SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A VF+ + + D+VSW+A+I+G ++ H A+E G M+R+G+ P+ T +
Sbjct: 306 VGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSA 365
Query: 241 LSACSHCGLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
L AC+ GL + G L +M + + ++ +VD+ + LL+ A ++ ++
Sbjct: 366 LKACAGMGLKELGRQLHSSLMKMDMESDLFVSV----GLVDMYSKCDLLEDA-RMAFNLL 420
Query: 298 VKPDSTIWRTLL 309
+ D W ++
Sbjct: 421 PEKDLIAWNAII 432
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 151/309 (48%), Gaps = 14/309 (4%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT+ +CC SL GLQIHA + + G D + L++LYS A K
Sbjct: 54 PTSVSYSKLLSQCCTT-KSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
L DE + D V+W+ LIS Y +N AL F ++ G K ++ T VL+AC+ +
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL--LGVKCNEFTFSSVLKACSIV 170
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
L G+++H + G+ + + N+L+ MY+KC + +F +PE++VVSW+A+
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKD 263
S +A+ F M +G+ P++ + + +++AC+ G + +L ++ D
Sbjct: 231 SCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ +VD+ + G L A + + +PD W ++ C +H+H E+
Sbjct: 291 WDPFSA----NALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEH---HEQ 342
Query: 324 VIEHLIELK 332
+E L ++K
Sbjct: 343 ALELLGQMK 351
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 2/233 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M I N F+ S + C G IH +++ GY D L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ +A +F++I Q D V+WN +I+ + ++ AL L + R SG P+
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR--SGICPN 358
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T L+ACA +G E G ++H + + S + + L+ MYSKC L A F
Sbjct: 359 IFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFN 418
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+PEKD+++W+A+ISG + +A+ F M + G+ + T + +L + +
Sbjct: 419 LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 471
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 305/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E F++M + I ++ S AI C +L G QIHA+ G
Sbjct: 487 LISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSG 546
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + L+ LY+ + EA F++I +D+++WN LIS + ++ DAL +F
Sbjct: 547 YSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFA 606
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+NR + + T + A A++ ++ G++IH I + G+ S + + N+LI Y+K
Sbjct: 607 QMNRAK--LEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAK 664
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F MPEK+ VSW+AMI+G + +G+G +A+ F M++ G P+ TF GV
Sbjct: 665 CGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGV 724
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV +G+ + + MSK+ G++P HY CVVDL+ RAG L +A + I M ++P
Sbjct: 725 LSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEP 784
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIWRTLL AC +HK+V +GE +HL+EL+ ++S YVLL N+Y+ G W+ + R+
Sbjct: 785 DATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQ 844
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ PG S I +K VH F V D HP ++IY+ L E+NK+ GY + S
Sbjct: 845 MMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYS 904
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+++ E+K + HSEKLAI FG+L+ I V KNLR+C DCH++ K +S + N
Sbjct: 905 LLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISN 964
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF G CSC DYW
Sbjct: 965 RAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 7/331 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +S + EE +LF +M I P+ S + C K G Q+HA V + G
Sbjct: 184 MISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG 243
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L++ + L+ LYS A K+F ++ +D V++N LIS + + AL LF
Sbjct: 244 SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFT 303
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ KPD VT +L ACA GAL GE++H Y+ + G S M + +L+ +Y
Sbjct: 304 KMKRDY--LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVN 361
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + A E+F ++VV W+ M+ + ++ F MQ G+ P+ T+ +
Sbjct: 362 CSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSI 421
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+ G +D G ++ K G N++ ++D+ + G LD A+ ++ ++ +
Sbjct: 422 LRTCTSVGALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL-TED 479
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
D W L+ H L ++H E+
Sbjct: 480 DVVSWTALISGYAQH---NLFAEALKHFKEM 507
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 175/375 (46%), Gaps = 41/375 (10%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M + I N + + C+ SL+ ++H ++L+ G+ +S L L+D+Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
K+F+++P R +W+ +IS ++ + + L LF + E P +++ VL
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEE--NVSPTEISFASVL 118
Query: 141 QACA-HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
+AC+ H + + E+IH I HG + N LI +Y+K G + A +VF + KD
Sbjct: 119 RACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDS 178
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG-----M 254
VSW AMISG + NG+ +AI F M AG+FP F+ VLS C+ L D G +
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238
Query: 255 MF----------LDRMSKDFGILPNI---------------HHYGCVVDLLGRAGLLDQA 289
+F + + + +PN + ++ L + G D A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298
Query: 290 YQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LL 343
+L T M +KPD +LL AC + + GE++ ++I KA S D ++ LL
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI--KAGISSDMIVEGALL 356
Query: 344 NLYSSVGDWEKVKEL 358
+LY + D + E+
Sbjct: 357 DLYVNCSDIKTAHEM 371
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 148/308 (48%), Gaps = 9/308 (2%)
Query: 7 MSSSPEEGFY-----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+S ++GF LF KM++ + + + + C +L G Q+H+ V++ G
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI 345
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D + L+DLY A ++F + V WNV++ + + ++ +F
Sbjct: 346 SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQ 405
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ + G P+ T +L+ C +GAL+ GE+IH + + G+ + +C+ LI MY+K
Sbjct: 406 M--QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKH 463
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A + + + E DVVSW+A+ISG A + +A++ F M G+ D+ F+ +
Sbjct: 464 GKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAI 523
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SAC+ +++G + S G ++ +V L R G + +AY + K D
Sbjct: 524 SACAGIQALNQGRQ-IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-D 581
Query: 302 STIWRTLL 309
S W L+
Sbjct: 582 SISWNGLI 589
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 4/261 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHAR++ G + L+ LY+ A K+FD + +D+V+W +IS + +N
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+A+ LF ++ +G P VL C + + GE++H + ++G + +
Sbjct: 193 YEEEAIHLFCEMHT--AGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
CN+L+ +YS+ + A +VF M KD VS++++ISGLA G A+E F M+R +
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYL 310
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD T +LSAC+ G + +G + K GI ++ G ++DL + A+
Sbjct: 311 KPDCVTVASLLSACASNGALCKGEQLHSYVIKA-GISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 291 QLITSMGVKPDSTIWRTLLGA 311
++ + + + +W +L A
Sbjct: 370 EMFLTAQTE-NVVLWNVMLVA 389
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 291/489 (59%), Gaps = 2/489 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +M+ + S +K C L G ++ A +L GY+LD+ + L+ YS
Sbjct: 620 LFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYS 679
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A ++FD++P RD V+WN +I+ Y +N + A+ + +E P+ +
Sbjct: 680 KSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM--QEQDVVPNKFSF 737
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ +L AC+ ALE G+++H I + + + +LI+MY+KCGS G A EVF + E
Sbjct: 738 VSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIE 797
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
K+VV+W+AMI+ A +G A+ F M++ G+ PD TFT +LSAC+H GLV EG
Sbjct: 798 KNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQI 857
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
M ++G+LP I HYGC+V LLGRA +A LI M PD+ +W TLLGACRIH
Sbjct: 858 FSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHG 917
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
++ L E + ++L A+ Y+LL N+Y++ G W+ V ++R M +G++ PG S I
Sbjct: 918 NIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWI 977
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY 436
+ ++HEF+ D SHP EIY L ++ +++ AGY + LH+LG + +L
Sbjct: 978 EVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCT 1037
Query: 437 HSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFRE 496
HSE+LAIA+G++ TPPGT IR+ KNLRIC DCH +K +S + RE+I RD RFH F+
Sbjct: 1038 HSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKN 1097
Query: 497 GRCSCNDYW 505
G+CSC DYW
Sbjct: 1098 GKCSCEDYW 1106
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 172/372 (46%), Gaps = 11/372 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E L+++M+ + + + C + G IH +LR G
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L LM++Y EA +F+ RD ++WN +I+ + ++ A LF
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQ 521
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ EE +PD++T VL C + ALE G++IH I+E G +NL N+LI MY +
Sbjct: 522 EMQNEE--LEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIR 579
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF + +DV+SW+AMI G A G AIE F MQ G P TF+ +
Sbjct: 580 CGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSI 639
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+ +DEG + + G + ++ ++G + A ++ M +
Sbjct: 640 LKVCTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR- 697
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE----SGDYVLLLNLYSSVGDWEKVK 356
D W ++ + LG+ +E +++ Q+ +V LLN SS E+ K
Sbjct: 698 DIVSWNKIIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGK 754
Query: 357 ELREFMNEKGLQ 368
+ + ++ LQ
Sbjct: 755 RVHAEIVKRKLQ 766
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 156/310 (50%), Gaps = 4/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ ++ F LFE+M+ N + C L G +IH+++++ G
Sbjct: 99 LISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG 158
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
YQ D ++ +L+ +Y A ++F I RD V++N ++ Y + ++ L LF
Sbjct: 159 YQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFG 218
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G PD VT + +L A L+ G++IH+ E G S + + +L+ M +
Sbjct: 219 QMSSE--GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + FKG ++DVV ++A+I+ LA +GH +A E + M+ GV + T+ +
Sbjct: 277 CGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSI 336
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACS ++ G + +S+D G ++ ++ + R G L +A +L +M K
Sbjct: 337 LNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTM-PKR 394
Query: 301 DSTIWRTLLG 310
D W ++
Sbjct: 395 DLISWNAIIA 404
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 178/368 (48%), Gaps = 42/368 (11%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C + L +IHA+++ D L L+++Y +A ++F E+P+RD
Sbjct: 34 LQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDV 93
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++WN LISCY + + A LF+ + + +G P+ +T + +L AC LE G+KIH
Sbjct: 94 ISWNSLISCYAQQGFKKKAFQLFEEM--QNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I + GY + NSL++MY KCG L A +VF G+ +DVVS++ M+ A + +
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ + FG M G+ PD T+ +L A + ++DEG + +++ + G+ +I +
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNSDIRVGTAL 270
Query: 277 VDLLGRAGLLDQAYQ---------------LITSM-------------------GVKPDS 302
V + R G +D A Q LI ++ GV +
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNR 330
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELR 359
T + ++L AC K + G+ + H+ E S D + L+++Y+ GD K +EL
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISE--DGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 360 EFMNEKGL 367
M ++ L
Sbjct: 389 YTMPKRDL 396
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 13/373 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + +E LF +M + I + + L G +IH + +G
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D ++ T L+ + A + F RD V +N LI+ ++ +A F+
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEA---FE 316
Query: 121 NLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
R S G + T L +L AC+ ALE G+ IH +ISE G+ S + + N+LI+MY+
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG L A E+F MP++D++SW+A+I+G A +A+ + MQ GV P TF
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSAC++ +G M + + + GI N H ++++ R G L +A + +
Sbjct: 437 LLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKV--- 355
D W +++ H ++ + E++ +E D + ++ S + E +
Sbjct: 496 -DVISWNSMIAGHAQHGSYETAYKLFQ---EMQNEELEPDNITFASVLSGCKNPEALELG 551
Query: 356 KELREFMNEKGLQ 368
K++ + E GLQ
Sbjct: 552 KQIHGRITESGLQ 564
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 31/269 (11%)
Query: 124 REESGCKPD--DV--------------TCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R E C PD DV T + +LQ C L ++IH + E G
Sbjct: 2 RNERHCGPDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPD 61
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ L N LI MY KC S+ A +VFK MP +DV+SW+++IS A G + A + F MQ
Sbjct: 62 IFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN 121
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLL 286
AG P+ T+ +L+AC ++ G ++ K + P + + ++ + G+ G L
Sbjct: 122 AGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDL 179
Query: 287 DQAYQLITSMGVKP-DSTIWRTLLGACRIHKHVT-----LGERVIEHLIELKAQESGDYV 340
+A Q+ G+ P D + T+LG +V G+ E + K Y+
Sbjct: 180 PRARQVFA--GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVT----YI 233
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGLQT 369
LL+ +++ ++ K + + E+GL +
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + + +M+++ + N F+ + C F +L G ++HA +++
Sbjct: 705 IIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRK 764
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q D ++ L+ +Y+ EA ++FD I +++ V WN +I+ Y ++ AL F+
Sbjct: 765 LQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFN 824
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ +E G KPD T +L AC H G + G +I + SE+G + L+ +
Sbjct: 825 CMEKE--GIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 882
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ A + MP D W ++ ++G+
Sbjct: 883 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 918
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 302/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS E LF +M ++ I N S +K + Q+H ++ G
Sbjct: 404 IISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG 463
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D ++ +L+D Y +A ++F+E D V++ +I+ Y + + +AL LF
Sbjct: 464 FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF- 522
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L ++ KPD C +L ACA+L A E G+++H +I ++G+ + NSL+ MY+K
Sbjct: 523 -LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAK 581
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F + E+ +VSWSAMI GLA +GHGR A++ F M + GV P+ T V
Sbjct: 582 CGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSV 641
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H GLV E ++ + M + FG P HY C++DLLGRAG +++A +L+ M +
Sbjct: 642 LGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEA 701
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++++W LLGA RIHK V LG R E L L+ ++SG +VLL N+Y+S G WE V E+R
Sbjct: 702 NASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRR 761
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ PG S I +K V+ F+V D SH R EIY LDE++ + AGYV +
Sbjct: 762 LMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEI 821
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH++ EK L +HSEKLA+AFG++ATP G IRV KNLR+CVDCH K + + +
Sbjct: 822 DLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVS 881
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 882 REIIVRDINRFHHFKDGSCSCGDYW 906
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 121/227 (53%), Gaps = 2/227 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + F +M + N F S +K C L G Q+H V+ G
Sbjct: 128 LISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSG 187
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + TL+ +Y+ ++ ++ +LFDEIP+R+ V+WN L SCY++ +A+ LF
Sbjct: 188 FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFY 247
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG KP++ + ++ AC L G+ IH Y+ + GY N+L+ MY+K
Sbjct: 248 EMVL--SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
G L A VF+ + + D+VSW+A+I+G ++ H A+E G M+R
Sbjct: 306 VGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 14/311 (4%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT+ +CC SL GLQIHA + + G D + L++LYS A K
Sbjct: 54 PTSVSYSKLLSQCCTT-KSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
L DE + D V+W+ LIS Y +N AL F ++ G K ++ T VL+AC+ +
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL--LGVKCNEFTFSSVLKACSIV 170
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
L G+++H + G+ + + N+L+ MY+KC + +F +PE++VVSW+A+
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKD 263
S +A+ F M +G+ P++ + + +++AC+ G + +L ++ D
Sbjct: 231 SCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ +VD+ + G L A + + +PD W ++ C +H+H E+
Sbjct: 291 WDPFSA----NALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEH---HEQ 342
Query: 324 VIEHLIELKAQ 334
+E L ++K Q
Sbjct: 343 ALELLGQMKRQ 353
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 300/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + PE+ +FEKM ++ I A+ C L G +H V +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D +M +L+ +YS ++ A +F+ + R V+WN +I Y +N R +AL F
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFS 439
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KPD T + V+ A A L + IH I + + +L+ MYSK
Sbjct: 440 EM--KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSK 497
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ MA ++F + ++ V++W+AMI G +G GR A++ F M++ V P+D T+ V
Sbjct: 498 CGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSV 557
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SACSH GLVDEG+ M +D+G+ P++ HYG +VDLLGRAG + +A+ I +M + P
Sbjct: 558 ISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISP 617
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
T++ +LGAC+IHK++ +GE+ + L EL E G +VLL N+Y+S W KV E+R+
Sbjct: 618 GITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRK 677
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL+ TPGCS + L+ VH F +HP+ IY L+E+ ++K AGYV + T+
Sbjct: 678 TMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPD-TN 736
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ + + L+ HSEKLAIAFG+L T PGTTI V KNLR+C DCHN K +S V
Sbjct: 737 LILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTG 796
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 797 REIIVRDMQRFHHFKNGICSCGDYW 821
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 192/404 (47%), Gaps = 38/404 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ +SS E +MR + + ++ +K C L G +IH +++ +
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + MT ++++Y+ + +A K+FD +P+RD V+WN +I+ + +N + AL L
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELV- 236
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L ++ G +PD +T + VL A A +G L G+ IH Y G+ +N+ +L MYSK
Sbjct: 237 -LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSK 295
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F GM +K VVSW++M+ G NG AI F M G+ P T
Sbjct: 296 CGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
Query: 241 LSACSHCGLVDEGMM---FLDRM-------------------------SKDFGILPNIHH 272
L AC+ G ++ G F+D++ S F L H
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 273 YGCVVDLLGRA--GLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+LG A G + +A + + S+G+KPDS +++ A VT + I
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA-ELSVTRHAKWIHG 474
Query: 328 LIELKAQESGDYVL--LLNLYSSVGDWEKVKELREFMNEKGLQT 369
LI + +V L+++YS G ++L + ++++ + T
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT 518
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+EH + +K L++++SK GS+ A VF+ + +K + M+ G A N A+
Sbjct: 79 NEHLFQTK------LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
M+ V P FT +L C + G ++ + N+ VV++
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN-SFAANVFAMTGVVNM 191
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ +D AY++ M + D W T++
Sbjct: 192 YAKCRQIDDAYKMFDRMPER-DLVSWNTIIA 221
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/507 (40%), Positives = 299/507 (58%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y + P++ ++ KMR + +PF F IK C + L GL +H V++ G
Sbjct: 106 IMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHG 165
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + T LM +Y F + A LF + +RD VAWN LI+ ++ + AL F
Sbjct: 166 LEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFR 225
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G KPD VT + L AC HLG LE GE+I+ + E G S + + N+ + M +K
Sbjct: 226 EMGM--AGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAK 283
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F MP+++V+SWS +I G A+NG A+ F M+ GV P+ TF V
Sbjct: 284 CGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAV 343
Query: 241 LSACSHCGLVDEGMMFLDRM--SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
LSACSH G V+EG + + M S D I P HY C+VDLLGR+G L++AY I M +
Sbjct: 344 LSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPI 403
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+ D IW LLGAC IH+++ LG+ V + L EL + + +VLL N+Y++ G W V+++
Sbjct: 404 EADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKV 463
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M +KG + S++ G +H D SHP+ I L+++ KQ+K GY+ E
Sbjct: 464 RQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPET 523
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
S H++ EEK + LS HSEKLAIAF ++ P IRV KNLRIC DCH F K++S +
Sbjct: 524 DSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRI 583
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD+ RFHHF+ G CSC D+W
Sbjct: 584 TMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 12/283 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDE+ + WN ++ Y++N A+ ++ + G +PD T V++AC
Sbjct: 88 ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKM--RHLGVRPDPFTFPFVIKAC 145
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L L G +H ++ +HG + L+ MY K G LG A +F M E+D+V+W+
Sbjct: 146 AELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWN 205
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
A+I+ G A++SF M AG+ PD T LSAC H G ++ G + +++
Sbjct: 206 ALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE-FARE 264
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLG 321
GI NI + +D+ + G +D+A L M P + W T++G ++
Sbjct: 265 EGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEM---PQRNVISWSTVIGGYAVNGE---S 318
Query: 322 ERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKVKELREFMN 363
E+ + +K Q +YV L + S+ +V E ++ N
Sbjct: 319 EKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFN 361
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 44/225 (19%)
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G + A ++F M + W+ ++ G NG A+ +G M+ GV PD TF V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 242 SACS-----------HCGLVDEGMMFLDRMSKDFGIL-PNIHHYGCVVDLLG-------- 281
AC+ H +V G+ F+ + + I+ GC L G
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 282 ----------RAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ G +A Q M G+KPDS + L AC + GE + E
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEF- 261
Query: 329 IELKAQESG-DYVLL-----LNLYSSVGDWEKVKELREFMNEKGL 367
A+E G D ++ L++ + GD +K L + M ++ +
Sbjct: 262 ----AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNV 302
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/502 (39%), Positives = 291/502 (57%), Gaps = 3/502 (0%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y + + E LF +++Q I N + SL G IH V GY D
Sbjct: 283 YVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 342
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T LM LY E +A K+F ++ +D + W V+ Y +N ++AL LF +
Sbjct: 343 VVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQL 402
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G +P T + VL CAHL AL+ G +IH +I E+G+ +M + +LI MY KCG +
Sbjct: 403 E--GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKM 460
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF+ M ++D++ W++M+ A +G+ + ++ F MQ G D +F VLSA
Sbjct: 461 AEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSAL 520
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM-GVKPDST 303
SH G V +G + M +DF I P YGCVVDLLGRAG + +A ++ + G PD
Sbjct: 521 SHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGI 580
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+W TLLGACR H + E ++E SG YV+L N+Y++ GDW+ V +R+ M
Sbjct: 581 LWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMR 640
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+G++ PG S+I + VHEF+ D SHPR + IY LD +N +++ AGY+ + LH
Sbjct: 641 SRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILH 700
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ E K + L YHSE+LAIAFG+++TPPGT +RV KNLR+C DCH K +S + RE+
Sbjct: 701 DVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREI 760
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFH+F++GRCSC DYW
Sbjct: 761 LVRDTHRFHNFKDGRCSCKDYW 782
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G ++H V G++ ++ + L+ +Y+ EA ++F+ + ++D AW +I Y +
Sbjct: 24 GRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ 83
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
AL +F + E+ P VT + +L ACA +L+ G +IH I + G+ +
Sbjct: 84 QGDYDRALGMFYQMQEED--VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 141
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ +LI MY+KCGS+ A++ FK + +DVVSW+AMI+ + A + MQ
Sbjct: 142 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 201
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
GV P+ T V +A + EG +S + ++ +++ G AGLL
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV-MESDVRVMNSAMNMFGNAGLLGD 260
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE--LKAQESGDYVLLLNLY 346
A +L M V D W ++ +++ R+ L + +KA + +VL+LN+Y
Sbjct: 261 ARRLFEDM-VDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDI-TFVLMLNVY 318
Query: 347 SSVGDWEKVKELREFMNEKG 366
+S+ K K + E + E G
Sbjct: 319 TSLTSLAKGKVIHELVKEAG 338
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 145/308 (47%), Gaps = 4/308 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +F +M+++ + + C SL G++IH ++L+ G
Sbjct: 77 MIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQG 136
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + T L+++Y+ A F + RD V+W +I+ +++ + A L+
Sbjct: 137 FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 196
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G P+ +T V A L G+ I+ +S S + + NS + M+
Sbjct: 197 RMQLD--GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGN 254
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G LG A +F+ M ++DVV+W+ +I+ N + +A+ FG +Q+ G+ +D TF +
Sbjct: 255 AGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLM 314
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ + + +G + + + K+ G ++ ++ L GR QA+++ MG K
Sbjct: 315 LNVYTSLTSLAKGKV-IHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK- 372
Query: 301 DSTIWRTL 308
D W +
Sbjct: 373 DVITWTVM 380
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
KPD + +LQ C+ ++ G ++H ++ + G+ +C LI MY++CGS+ A +
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF+ + KDV +W+ MI G A+ F MQ V P T+ +L+AC+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ +GM ++ + G ++ ++++ + G + A+ + + D W ++
Sbjct: 122 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 179
Query: 310 GACRIHKHVTLG 321
AC H L
Sbjct: 180 AACVQHDQFALA 191
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/494 (39%), Positives = 286/494 (57%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ F+KMR + + + + + + + +H +++ G++ + L
Sbjct: 23 EDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNAL 82
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ K A +F ++ +D V+W L++ Y N +A+ LF + SG P
Sbjct: 83 IDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRI--SGVYP 140
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D + VL ACA L ++FG++IH + + G S +++ NSL+ MY+KCGS+ A F
Sbjct: 141 DQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAF 200
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP +DV+SW+A+I G A NG G+ +++ + M G PD TF G+L ACSH GL+
Sbjct: 201 DNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLG 260
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + + M K +GI P HY C++DLLGR+G L +A L+ M V PD+ +W+ LL A
Sbjct: 261 SGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK + LGE ++L EL+ S YV+L N+YS+ G WE +R M +G+ P
Sbjct: 321 CRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEP 380
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S I V F+ +D +HP NEIY +DEI +K AGYV +++ LH+ E K
Sbjct: 381 GYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKE 440
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L+YHSEKLA+AFG+L P G IR+ KNLR+C DCH K S VY R +I+RD F
Sbjct: 441 LGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCF 500
Query: 492 HHFREGRCSCNDYW 505
HHF EGRCSC DYW
Sbjct: 501 HHFTEGRCSCGDYW 514
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D V+WN LI +R DAL F + + K D+ T VL + A + ++
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRD--MKIDEYTLPSVLNSFASMKVMQNAIS 62
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H I + G+ + + N+LI MY+K G L A VF M +KDVVSW+++++G + NG
Sbjct: 63 VHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGS 122
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
+AI+ F M+ +GV+PD VLSAC+ ++D G + K G+ ++
Sbjct: 123 YEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSVDN 181
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+V + + G + A + +M + D W L+
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTR-DVISWTALI 215
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V YS + S EE LF KMR + + A + + C + + G QIHA +++ G
Sbjct: 113 LVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSG 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+ +Y+ +A + FD +P RD ++W LI Y +N R + +L +D
Sbjct: 173 LESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYD 232
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ +G KPD +T + +L AC+H G L G + + +G +I +
Sbjct: 233 QMI--ATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLG 290
Query: 180 KCGSLGMAFEVFKGM-PEKDVVSWSAMISG 208
+ G L A + M D V W A+++
Sbjct: 291 RSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/456 (43%), Positives = 291/456 (63%), Gaps = 3/456 (0%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTF--EKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
IHA V + G + + T++D Y+ A KLFD + RD V+WN +I+ Y +N
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQN 272
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ +AL L+ + + + VT VL ACAH GA++ G++IH + G +
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ S++ MYSKCG + MA++ F+ + K+++SWSAMI+G M+G+G++A+ F M+++G
Sbjct: 333 VGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG 392
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ P+ TF VL+ACSH GL+ EG + + M +FGI P + HYGC+VDLLGRAG LD+A
Sbjct: 393 LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEA 452
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
Y LI M VKPD+ +W LL ACRI+K+V L + E L EL A SG YVLL N+Y+
Sbjct: 453 YGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEA 512
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W++V+ +R + +G++ PG S++ LKG H F V D SHP+ EIY L+++ +++
Sbjct: 513 GMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERI 572
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
AGYV S LH+L EE+ + L HSEKLA+AF ++ + G+ I V KNLR+C DCH
Sbjct: 573 HDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCH 632
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K+++ + RE+IIRD RFHHF++G CSC DYW
Sbjct: 633 AAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 149/321 (46%), Gaps = 12/321 (3%)
Query: 49 GLQIHARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G Q+H LR G + D+ + L+ +Y + +A + FDEIP + V + S +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
RN L +F ++ S D+ L+ L A A + IH +S+ G +
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226
Query: 168 MNLCNSLIAMYSKCGS--LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ N++I Y+K G LG A ++F M ++DVVSW+ MI+ A NG +A+ + M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285
Query: 226 QRAG--VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
G V + T + VL AC+H G + G +++ + G+ N++ VVD+ +
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVR-MGLEDNVYVGTSVVDMYSKC 344
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLL 342
G ++ A++ + K + W ++ +H + G+ + ++ K+ +Y+
Sbjct: 345 GKVEMAWKAFQKIKGK-NILSWSAMIAGYGMHGY---GQEALHVFTDMRKSGLKPNYITF 400
Query: 343 LNLYSSVGDWEKVKELREFMN 363
+ + ++ + E R + N
Sbjct: 401 ITVLAACSHAGLLSEGRYWYN 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR--QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + E L+ KM + N S + C ++ G +IH +V+R
Sbjct: 265 MIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVR 324
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + + T+++D+YS K A K F +I ++ ++W+ +I+ Y + ++AL +
Sbjct: 325 MGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHV 384
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAM 177
F ++ + SG KP+ +T + VL AC+H G L G + + +E G + ++ +
Sbjct: 385 FTDMRK--SGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDL 442
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+ + K M K D W A++S
Sbjct: 443 LGRAGCLDEAYGLIKEMKVKPDAALWGALLSA 474
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 305/503 (60%), Gaps = 8/503 (1%)
Query: 6 SMSSSPEEGFY-----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++++ EG Y LF++M+ K + + + + + C SL G +H+ V+++G
Sbjct: 643 TIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG 702
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+++Y+ EA +F +IP +D V+WN +I Y +N +AL LF
Sbjct: 703 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFL 762
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ ++ KPDD+T VL ACA L AL+ G +IH +I GY S +++ +L+ MY+K
Sbjct: 763 DMQKQ---FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAK 819
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L +A +F +P+KD++SW+ MI+G M+G G +AI +F M+ AG+ PD+ +F+ +
Sbjct: 820 CGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVI 879
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL++EG F + M + G+ P + HY CVVDLL R G L +AY+ I SM +KP
Sbjct: 880 LNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKP 939
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V EH+ EL+ + YV+L N+Y+ WE+VK+LR+
Sbjct: 940 DTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRK 999
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G + PGCS I + G + FV + HP+ I +L ++ Q++ Y +
Sbjct: 1000 RMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRY 1059
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N EK HSEK A+AFG+L PPG T+RV+KN R+C DCH K +S
Sbjct: 1060 VLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTK 1119
Query: 481 REVIIRDRLRFHHFREGRCSCND 503
RE+++RD RFHHF++G CSC D
Sbjct: 1120 REIVLRDSNRFHHFKDGLCSCRD 1142
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 171/342 (50%), Gaps = 7/342 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E LF+KM++ + N + + +KC + ++H VL+ G
Sbjct: 441 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 500
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ ++ +L+ Y F A LFDE+ + D V+WN +I+ + N + + L +F
Sbjct: 501 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF- 559
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G + D T + VL A A++G L G +H + + + ++ N+L+ MYSK
Sbjct: 560 -IQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 618
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A EVF M + +VSW++ I+ G DAI F MQ GV PD T T +
Sbjct: 619 CGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 678
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ +D+G + K+ G+ N+ ++++ + G +++A + + + VK
Sbjct: 679 VHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK- 736
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
D W T++G + +L +E ++++ Q D + +
Sbjct: 737 DIVSWNTMIGG---YSQNSLPNEALELFLDMQKQFKPDDITM 775
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 18/301 (5%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L K + + N + CS ++ C + SL G ++H+ ++ +G +D L L+ +Y
Sbjct: 358 LLTKSKSYELGLNSY-CS-VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYV 415
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ K+FD+I WN+L+S Y + R+++ LF + ++ G + T
Sbjct: 416 NCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKM--QKLGVVGNCYTF 473
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL+ A LG ++ +++H Y+ + G+GS + NSLIA Y K G + A +F + E
Sbjct: 474 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 533
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
DVVSW++MI+G +NG + +E F M GV D T VL A ++ G + G
Sbjct: 534 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG--- 590
Query: 257 LDRMSKDFGILP----NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLG 310
R FG+ + ++D+ + G L+ A ++ MG D+TI W + +
Sbjct: 591 --RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG---DTTIVSWTSTIA 645
Query: 311 A 311
A
Sbjct: 646 A 646
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VLQ CA +LE G+++H I +G L L+ MY CG L ++F +
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+ ++S A G+ R+++ F MQ+ GV + TFT VL + G V E
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ K G N ++ + G ++ A+ L + +PD W +++ C ++
Sbjct: 495 YVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNGFS 552
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
G + ++ L G V L L S + W + L
Sbjct: 553 GNGLEIFIQMLIL-----GVEVDLTTLVSVLVAWANIGNL 587
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 308/534 (57%), Gaps = 30/534 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE L + + + + + + + + C +L G Q+H+ ++ G
Sbjct: 389 MIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAG 448
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q +S + L+ +Y ++F+ + +DTV+WN I+ ++N DA +FD
Sbjct: 449 CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFD 508
Query: 121 N-LNRE--------------ESGC--------------KPDDVTCLLVLQACAHLGALEF 151
N L+R+ E G KP+ ++L C LG+ +
Sbjct: 509 NMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKL 568
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G++IH +HG S++ + N+L++MY KCG + +VF M E+D+ +W+ I+G A
Sbjct: 569 GQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQ 627
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+G GR+AI+ + M+ GV P++ TF G+L+ACSH GLVDEG F MS+D+G+ P +
Sbjct: 628 HGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLE 687
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HY C+VDLLGR G + A + I M ++PD+ IW LLGAC+IHK+ +G R E L
Sbjct: 688 HYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTT 747
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+ +G+YV+L N+YSS+G W +V ELR+ M ++G+ PGCS + ++ VH FV D
Sbjct: 748 EPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQ 807
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
H +I EI L ++ L+ GYV + LH++ E+K ++L YHSEKLA+A+G+L TP
Sbjct: 808 HEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTP 867
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G I++ KNLRIC DCH F K +S V R++ IRD RFHHFR G CSC D+W
Sbjct: 868 KGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 6/178 (3%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LFD +P R+T++W +I+ Y +N R+ +AL L L+R +G P + A
Sbjct: 370 EAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHR--NGMLPSLSSLTSSFLA 427
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C+H+GALE G ++H + G +CN+LI+MY KC ++ +VF M KD VSW
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSW 487
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
++ I+ L N DA F M + D ++T ++SA + DE + F M
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGDEAVEFFKTM 541
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 157/369 (42%), Gaps = 33/369 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQ-------IH 53
M+ Y +G+ +F M + +P +FA S + GLQ +
Sbjct: 194 MISGYVRIEQHGKGWDIFRMMHHE--GASPDQSNFA-----SVLSAVTGLQDLGVLEVLR 246
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
VL+ G++ D + T+++++Y+ + + A K FD + +R+ W+ +I+ R
Sbjct: 247 PLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRI 306
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
A+ ++ R+ P L L C + R + E + N
Sbjct: 307 DAAIAVY---GRDPVKSIPSQTALLTGLARCGRITEA-------RILFEQIPDPIVVSWN 356
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
++I Y + G + A E+F MP ++ +SW+ MI+G A NG +A++ A+ R G+ P
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ T ACSH G ++ G + ++ G N + ++ + G+ ++ Q+
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQ-VHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQV 475
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
M VK D+ W + + A + + + ++++ S D V + S+
Sbjct: 476 FNRMRVK-DTVSWNSFIAALVQNNMLEDARHIFDNML------SRDVVSWTTIISAYAQA 528
Query: 353 EKVKELREF 361
E+ E EF
Sbjct: 529 ERGDEAVEF 537
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 40 CMKFCSLMGGLQIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
M C + G AR L D D +++ Y + +A LF ++PQR+ V
Sbjct: 131 AMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVT 190
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
W V+IS Y+R ++ +F ++ E G PD VL A L L E +
Sbjct: 191 WTVMISGYVRIEQHGKGWDIFRMMHHE--GASPDQSNFASVLSAVTGLQDLGVLEVLRPL 248
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGS-LGMAFEVFKGMPEKDVVSWSAMISGLAMNG---- 213
+ + G+ S + + S++ +Y++ S L +A + F GM E++ +WS MI+ L+ G
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308
Query: 214 ----HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+GRD ++S + T +L+ + CG + E + +++ P
Sbjct: 309 AIAVYGRDPVKSIPSQ------------TALLTGLARCGRITEARILFEQIPD-----PI 351
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ + ++ + G++D+A +L M
Sbjct: 352 VVSWNAMITGYMQNGMVDEAKELFDRM 378
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 49/267 (18%)
Query: 49 GLQIHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G+ AR+L D + + T L+ Y+ + +A ++FD +P+R+TVAWN ++SCY+
Sbjct: 78 GMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYV 137
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+N A LFD + DVT
Sbjct: 138 QNGDITMARRLFDAM-------PSRDVTSW------------------------------ 160
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG-LAMNGHGRDAIESFGAMQ 226
NS++ Y + A+ +FK MP++++V+W+ MISG + + HG+ + F M
Sbjct: 161 ----NSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGK-GWDIFRMMH 215
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMM-FLDRMSKDFGILPNIHHYGCVVDLLGR-AG 284
G PD F VLSA + GL D G++ L + G ++ ++++ R A
Sbjct: 216 HEGASPDQSNFASVLSAVT--GLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDAS 273
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGA 311
LD A + M V+ + W T++ A
Sbjct: 274 ALDIAIKFFDGM-VERNEYTWSTMIAA 299
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 292/492 (59%), Gaps = 2/492 (0%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
G +F +M + N F ++ C G Q+HA ++++ D + T L+D
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+Y+ +A FD + RD +W V+IS Y + + A+ F + RE G KP++
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQRE--GIKPNE 354
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
T L C+H+ LE G ++H + G+ + + ++L+ +Y KCG + A +FKG
Sbjct: 355 YTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKG 414
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ +D+VSW+ +ISG + +G G A+E+F M G+ PD+ TF GVLSACS GLV+EG
Sbjct: 415 LISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEG 474
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
D MSK +GI P+I HY C+VD+LGRAG ++ I M + P S IW T+LGAC+
Sbjct: 475 KKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACK 534
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+H +V GE+ + L E++ Y+LL N+++S G W+ V+ +R M +G++ PGC
Sbjct: 535 LHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGC 594
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S + + G VH F+ D SHP+I EIY LD++ + L GYV + LHN+ +EK
Sbjct: 595 SWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEH 654
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L YHSE+LA++F +L+T IR+ KNLRIC DCH+F K++S + N+E+++RD RFHH
Sbjct: 655 LYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHH 714
Query: 494 FREGRCSCNDYW 505
F+ G CSC D W
Sbjct: 715 FKRGTCSCQDRW 726
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 42/387 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ ++ LF KM++ + F S +K C SL G +HA LR G
Sbjct: 22 LLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSG 81
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D L +L+D+YS ++A K+F +I D VAW+ +I+ + ++A LF
Sbjct: 82 CEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFH 141
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G +P+ T ++ ++G L +G+ IH I ++G+ S + N LI MY K
Sbjct: 142 LMRRK--GARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMK 199
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
+ +VF+ M D+VSW+A++SG + F M G P+ TF V
Sbjct: 200 SRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISV 259
Query: 241 LSACS-----------HCGLVDE--------GMMFLDRMSK-----DFGI----LPNIHH 272
L +CS H ++ G +D +K D G+ L N
Sbjct: 260 LRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDI 319
Query: 273 YGCVVDLLGRAGLLDQA------YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ V + G A DQA ++ + G+KP+ + L C + G ++
Sbjct: 320 FSWTVIISGYAQ-TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL-- 376
Query: 327 HLIELKAQESGDYVL---LLNLYSSVG 350
H + +KA GD + L++LY G
Sbjct: 377 HAVAVKAGHFGDIFVGSALVDLYGKCG 403
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LF +P+++ V+WN L++ Y + + L LF + E+ K T VL+ C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECET--KFSKFTLSTVLKGC 61
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A+ G+L G+ +H G L SL+ MYSKCG++ A +VF + DVV+WS
Sbjct: 62 ANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWS 121
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
AMI+GL GHG++A E F M+R G P+ T + ++S ++ G
Sbjct: 122 AMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E+ F +M+++ I N + + + C +L G Q+HA ++ G
Sbjct: 325 IISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAG 384
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+DLY A +F + RD V+WN +IS Y ++ + AL F
Sbjct: 385 HFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFR 444
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+ E G PD+ T + VL AC+ +G +E G+K
Sbjct: 445 MMLSE--GIMPDEATFIGVLSACSFMGLVEEGKK 476
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+A +F GMPEK+ VSW+A+++G A G G+ ++ F M+ T + VL C+
Sbjct: 3 LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGC-VVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
+ G + EG + L ++ G + GC +VD+ + G + A ++ T + PD
Sbjct: 63 NTGSLREGKV-LHALALRSGCEID-EFLGCSLVDMYSKCGTVYDALKVFTKI-RNPDVVA 119
Query: 305 WRTLLGACRIHKHVTLGERVIE--HLIELKAQESGDYVL--LLNLYSSVGD 351
W ++ H G+ E HL+ K + L L++ +++GD
Sbjct: 120 WSAMITGLDQQGH---GQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD 167
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/487 (43%), Positives = 288/487 (59%), Gaps = 19/487 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + +Q+HA VLR G D +L+TTL+D Y+ A K+F
Sbjct: 103 DALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVF 162
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------NREESGCKPDDVTCLLVL 140
DE+ RD WN L++ + AL LF L +REE P++VT + L
Sbjct: 163 DEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREE----PNEVTIVAAL 218
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD-- 198
ACA +G L+ G +H + G + +CNSLI MYSKCGSL A +VF + +D
Sbjct: 219 SACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRT 278
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+VS++A I +M+GHG DA+ F M + PD T+ VL C+H GLVD+G+ +
Sbjct: 279 LVSYNAAIQAHSMHGHGGDALRLFDEMP-TRIEPDGVTYLAVLCGCNHSGLVDDGLRVFN 337
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M + PN+ HYG +VDLLGRAG L +AY + SM D +W+TLLGA ++H V
Sbjct: 338 SMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVV 393
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L E L EL + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 394 ELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEI 453
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
GV+H+F+ D HPR EIY+ L++I ++ GY E ++ LH++G EEK AL YHS
Sbjct: 454 DGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHS 513
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG++ATPPG T+RV KNLRIC DCH AK++S Y R ++IRDR RFH F +G+
Sbjct: 514 EKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQ 573
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 574 CSCRDYW 580
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD ++ L+A A ++H + G + + L +L+ Y+KCG L A +
Sbjct: 101 RPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARK 160
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF--------PDDQTFTGVL 241
VF M +DV +W+++++GLA A+ F + A F P++ T L
Sbjct: 161 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL--ANSFQELPSREEPNEVTIVAAL 218
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SAC+ GL+ +G M++ +K FG+ N+ ++D+ + G L +A + S +KP+
Sbjct: 219 SACAQIGLLKDG-MYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHS--IKPE 275
Query: 302 STIWRTLLGACRIH 315
+ A + H
Sbjct: 276 DRTLVSYNAAIQAH 289
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/460 (45%), Positives = 285/460 (61%), Gaps = 14/460 (3%)
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R G D+ L+ ++ F + LF +I Q + WN +I + N DA+
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAI- 97
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG---------EKIHRYISEHGYGSKM 168
F L R E G P++ T VL+ACA L L+ G E IH+ I E G +
Sbjct: 98 EFYGLMRSE-GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNV 156
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ SL+ MY+KCG++ A VF GMPEKD+VSW AMI G A+NG ++AI+ F MQR
Sbjct: 157 FVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRE 216
Query: 229 ---GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
G+ PD TF G+L C+H GLVDEG + + M + F + P+I HYGC+VDLLGRAGL
Sbjct: 217 NKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGL 276
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
LD+A+QLI +M ++ ++ +W LLGACRIH+ L E ++ LIEL+ SG+YVLL N+
Sbjct: 277 LDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNI 336
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
YS+ W++ ++R MNEK +Q PGCS I + G+VHEF+V D HP +IY LDE+
Sbjct: 337 YSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDEL 396
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
K++K+AGYV L ++ EEK + L HSEKLAIAFG+++ P IRV KNLR+C
Sbjct: 397 TKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVC 456
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH K++S + RE+ +RD RFH FREG CSCNDYW
Sbjct: 457 GDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
M+R + ++ + MR + N F F +K C + L G++IH V+++
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEW 142
Query: 60 --------GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
G + + T+L+D+Y+ +A +FD +P++D V+W +I Y N
Sbjct: 143 IHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGL 202
Query: 112 TRDALCLFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEK----IHRYIS-----E 161
++A+ LF + RE G KPD T + +L C H G ++ G + ++R+ S E
Sbjct: 203 PKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIE 262
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
H YG ++ + + G L A ++ + MP E + + W A++
Sbjct: 263 H-YG-------CMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 302
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 317/538 (58%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS ++ E F+ M I + + C K L G +H V G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 61 YQLDSQLMTTLMDLYST------FEKSFEA-----------------CK---------LF 88
L+ L+D+Y+ ++ F+A CK LF
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
DE+ RD + +N +++ YI + + R+AL LF ++ R + + D+ T + +L ACA LGA
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD--LRVDNFTVVNLLTACASLGA 387
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L+ G +H I + + + L +L+ MY KCG + A VF+ M ++DV +W+AMI+G
Sbjct: 388 LQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAG 447
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G+ A+E F M+ G P+ ++ VL+ACSH L++EG ++ D M + I P
Sbjct: 448 LAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHP 507
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
I HYGC++DLLGR+GLLD+A L+ +M ++P++ IW ++L ACR+HKH+ L + EHL
Sbjct: 508 QIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHL 567
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L+ E G YV L N+Y WE ++R M E+ ++ T G S+I + G VH+FVV
Sbjct: 568 LKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVS 627
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALSYHSEKLAIAFGV 447
D SHPRI EI ML+EI+ +LK GY + +TS++ ++ EEK AL HSEKLAIAFG+
Sbjct: 628 DKSHPRILEIIAMLEEISHRLKSLGY-SPLTSQITVDVDEEEKEQALLAHSEKLAIAFGL 686
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ P + + KNLR+C DCH+ K++S ++NRE+I+RDR RFHHFREG CSCND+W
Sbjct: 687 INLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 74/391 (18%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCM---KFCSLMGGLQIHARVLRDGYQLDS 65
S P F LF +MR+ + + F F KC + SL+ +HA LR +
Sbjct: 82 SDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAA 141
Query: 66 QLMT-TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS-------------------- 104
++ +L+ +Y + +A + FDEI +D VAW +LIS
Sbjct: 142 PFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPV 201
Query: 105 -----------CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
Y R R R+A+ F + G PD+VT + VL ACA L LE G
Sbjct: 202 RDVISWTSLIAAYSRANRAREAVGCFKTM--LSHGIAPDEVTVIAVLSACAKLKDLELGR 259
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-------------------- 193
+H + E G + NL +LI MY+KCG G A +VF
Sbjct: 260 SLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKH 319
Query: 194 ------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
M +D++++++M++G +G R+A+ F +M+R + D+ T +L
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+AC+ G + +G + + + +I+ ++D+ + G +D+A + MG K D
Sbjct: 380 TACASLGALQQGRALHACIEQRL-VEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRD 437
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELK 332
W ++ + +G+ +EH +++
Sbjct: 438 VHTWTAMIAGLAFNG---MGKAALEHFYQMR 465
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/542 (39%), Positives = 317/542 (58%), Gaps = 40/542 (7%)
Query: 1 MVRAYS-MSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M++A++ + +S +F M R N + F K C ++ G QI ++
Sbjct: 86 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 145
Query: 59 DGYQLDSQLMTTLMDLYST----------FEKSFE---------------------ACKL 87
G + + + ++ +Y+ F+ S + A ++
Sbjct: 146 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 205
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FDE+ +RD V+W +I+ Y++ ++AL LF + ++G P++ T L ACA+L
Sbjct: 206 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM--LQTGPPPNEFTLASALAACANLV 263
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK---GMPEKDVVSWSA 204
AL+ G IH YI + L SL+ MY+KCG + A +VF G+ K V W+A
Sbjct: 264 ALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNA 322
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
MI G AM+G ++AI+ F M+ V P+ TF +L+ACSH LV+EG + M+ +
Sbjct: 323 MIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSY 382
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
GI P I HYGC+VDLLGR+GLL +A + + +M + PD+TIW LLGACRIHK + G+R+
Sbjct: 383 GIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRI 442
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
+ + EL + G +VLL NLYS+ G W++ K +R+ + G + TPGCS+I L GV H+
Sbjct: 443 GKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQ 502
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAI 443
F+V D SHP+ ++Y LDE+ +LK AGYV E L ++ EE K ALS HSEKLAI
Sbjct: 503 FLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAI 562
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ TPPGT IR+ KNLR+C DCH K +S VY RE+I+RDR+R+HHF++G CSC D
Sbjct: 563 AFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKD 622
Query: 504 YW 505
YW
Sbjct: 623 YW 624
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMD--LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY-I 107
Q HA ++ G L L+ + S+F A +LFD+IP+ D +N +I + +
Sbjct: 33 QTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAV 92
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGS 166
+ +++ +F ++ R SG P+ T + V +AC + LG LE GE+I + + G S
Sbjct: 93 IPTSSHNSMRIFLSMVRV-SGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAIKIGLES 150
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GR--------- 216
+ + N++I MY+ G + A VF ++D+ SW+ MI G +G GR
Sbjct: 151 NLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMS 210
Query: 217 ---------------------DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM- 254
+A++ F M + G P++ T L+AC++ +D+G
Sbjct: 211 ERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRW 270
Query: 255 --MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI-TSMGVKPDSTIWRTLLGA 311
+++D+ I N ++D+ + G +D A ++ G+K W ++G
Sbjct: 271 IHVYIDKSE----IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGG 326
Query: 312 CRIHKHVTLGERVIEHL-IELKAQESGDYVLLLN 344
+H + E + +E + +V LLN
Sbjct: 327 YAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLN 360
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/506 (40%), Positives = 303/506 (59%), Gaps = 8/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS S+ + M ++ + N + S ++ C +L Q+H +L+ G
Sbjct: 88 MISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR---QLHGSILKVG 144
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D YS + +A +F+E+ D V WN +I + +N + L L+
Sbjct: 145 LESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYK 204
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R + D T VL+AC L LE G ++H ++ + Y + L N+L+ MY K
Sbjct: 205 RMKRAD--FVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCK 260
Query: 181 CGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
CGSL A +F + M EKDV+SWS MI+GLA NG DA++ F AM+ G P+ T G
Sbjct: 261 CGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILG 320
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL ACSH GLV++G + M + FGI P HYGC++DLLGRAG LD+A +LI M +
Sbjct: 321 VLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHE 380
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD+ WR LLGACR+HK+V L + +++L ++G Y+LL N+Y++ WE V E+R
Sbjct: 381 PDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVR 440
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M +G++ PGCS I + VH F++ D SHPRI EI + L ++ ++L GYV +
Sbjct: 441 RKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTN 500
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L +L E+ ++L YHSEKLAI FG+++ P TI + KNLRIC DCH FAK++S +
Sbjct: 501 FVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLE 560
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
NR ++IRD +R+HHFR G CSC DYW
Sbjct: 561 NRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 10/295 (3%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
E M + R+ + S IKCC+ ++ +H V +GY+ + L+ TL+++Y
Sbjct: 4 MEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVK 63
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
F EA LFDE+P R+ V+W +IS Y + AL + RE G +P+ T
Sbjct: 64 FGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLRE--GVRPNMYTYS 121
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
VL+AC L L ++H I + G S + + ++LI YSK G A VF M
Sbjct: 122 SVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG 178
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG-MMF 256
D+V W+++I G A N G + + + M+RA D T T VL AC+ L++ G +
Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH 238
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ + D ++ N ++D+ + G L+ A L T M + D W T++
Sbjct: 239 VHVLKYDQDLILN----NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 308/516 (59%), Gaps = 11/516 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ YS + +E LF M + + N + + C++ + IH V++
Sbjct: 288 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 347
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D + TLMD+YS K A ++F ++ RD V WN +I+ Y+ ++ DAL L
Sbjct: 348 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 407
Query: 120 ---DNLNREES------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
NL R+ S KP+ +T + +L +CA L AL G++IH Y ++ + + +
Sbjct: 408 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 467
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++L+ MY+KCG L M+ +VF +P+K+V++W+ +I M+G+G++AI+ M GV
Sbjct: 468 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 527
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P++ TF V +ACSH G+VDEG+ M D+G+ P+ HY CVVDLLGRAG + +AY
Sbjct: 528 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 587
Query: 291 QLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
QL+ M + W +LLGA RIH ++ +GE ++LI+L+ + YVLL N+YSS
Sbjct: 588 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 647
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W+K E+R M E+G++ PGCS I VH+FV D SHP+ ++ L+ + +++
Sbjct: 648 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 707
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+ GYV + + LHN+ +EK L HSEKLAIAFG+L T PGT IRVAKNLR+C DCH
Sbjct: 708 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 767
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + +RE+I+RD RFH F+ G CSC DYW
Sbjct: 768 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 10/311 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFC---SLMGGLQIHARVLRDGYQLDSQLM 68
E F M + + + F + C LM G Q+HA LR G +L+S ++
Sbjct: 94 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFII 152
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
TL+ +Y K + L RD V WN ++S +N++ +AL + E G
Sbjct: 153 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE--G 210
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS-LIAMYSKCGSLGMA 187
+PD+ T VL AC+HL L G+++H Y ++G + + S L+ MY C +
Sbjct: 211 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 270
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF-GAMQRAGVFPDDQTFTGVLSACSH 246
VF GM ++ + W+AMI+G + N H ++A+ F G + AG+ + T GV+ AC
Sbjct: 271 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 330
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
G + K G+ + ++D+ R G +D A ++ M + D W
Sbjct: 331 SGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWN 388
Query: 307 TLLGACRIHKH 317
T++ +H
Sbjct: 389 TMITGYVFSEH 399
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS-QLMTTLMDLYSTFEKSFEA 84
I + +A +K + G QIHA V + GY +DS + TL++LY
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL----CLFDNLNREESGCKPDDVTCLLVL 140
K+FD I +R+ V+WN LIS ++ AL C+ D +P T + V+
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD------ENVEPSSFTLVSVV 119
Query: 141 QACAHLG---ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
AC++L L G+++H Y G + + N+L+AMY K G L + + +
Sbjct: 120 TACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
D+V+W+ ++S L N +A+E M GV PD+ T + VL ACSH ++ G
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAMYSKCGSLGM 186
G KPD+ +L+A A L +E G++IH ++ + GYG + + N+L+ +Y KCG G
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
++VF + E++ VSW+++IS L A+E+F M V P T V++ACS+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 247 CGLVDEGMMFLDRMSKDFGILP---NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
+ EG+M + + +G+ N +V + G+ G L + L+ S G + D
Sbjct: 125 LPM-PEGLM-MGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLV 181
Query: 304 IWRTLLGA 311
W T+L +
Sbjct: 182 TWNTVLSS 189
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 308/516 (59%), Gaps = 11/516 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ YS + +E LF M + + N + + C++ + IH V++
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D + TLMD+YS K A ++F ++ RD V WN +I+ Y+ ++ DAL L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 120 ---DNLNREES------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
NL R+ S KP+ +T + +L +CA L AL G++IH Y ++ + + +
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++L+ MY+KCG L M+ +VF +P+K+V++W+ +I M+G+G++AI+ M GV
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P++ TF V +ACSH G+VDEG+ M D+G+ P+ HY CVVDLLGRAG + +AY
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 291 QLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
QL+ M + W +LLGA RIH ++ +GE ++LI+L+ + YVLL N+YSS
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W+K E+R M E+G++ PGCS I VH+FV D SHP+ ++ L+ + +++
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+ GYV + + LHN+ +EK L HSEKLAIAFG+L T PGT IRVAKNLR+C DCH
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 854
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + +RE+I+RD RFH F+ G CSC DYW
Sbjct: 855 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 34 SFAIKCCMKFCS-------LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
SF + + CS LM G Q+HA LR G +L+S ++ TL+ +Y K +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKV 257
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
L RD V WN ++S +N++ +AL + E G +PD+ T VL AC+HL
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE--GVEPDEFTISSVLPACSHL 315
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNS-LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G+++H Y ++G + + S L+ MY C + VF GM ++ + W+AM
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 206 ISGLAMNGHGRDAIESF-GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
I+G + N H ++A+ F G + AG+ + T GV+ AC G + K
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR- 434
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
G+ + ++D+ R G +D A ++ M + D W T++ +H
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEH 486
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+ S+ E + M I + +A +K + G QIHA V + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 YQLDS-QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
Y +DS + TL++LY K+FD I +R+ V+WN LIS ++ AL F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLG---ALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+ E +P T + V+ AC++L L G+++H Y G + + N+L+A
Sbjct: 188 RCMLDE--NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVA 244
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY K G L + + +D+V+W+ ++S L N +A+E M GV PD+ T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 237 FTGVLSACSHCGLVDEG 253
+ VL ACSH ++ G
Sbjct: 305 ISSVLPACSHLEMLRTG 321
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 9/222 (4%)
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
R W L+ +R+ R+A+ + ++ G KPD+ +L+A A L +E G+
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTY--VDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 154 KIHRYISEHGYG-SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+IH ++ + GYG + + N+L+ +Y KCG G ++VF + E++ VSW+++IS L
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP---N 269
A+E+F M V P T V++ACS+ + EG+M + + +G+ N
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQVHAYGLRKGELN 235
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+V + G+ G L + L+ S G + D W T+L +
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/534 (40%), Positives = 306/534 (57%), Gaps = 37/534 (6%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S+S +P + M Q + N F I+ C Q+HA VL+ G+ D
Sbjct: 78 FSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKL---EEEAKQLHAHVLKFGFGGD 134
Query: 65 SQLMTTLMDLYSTF------EKSF-------------------------EACKLFDEIP- 92
+ + L+ +Y F + F EA ++F+ +P
Sbjct: 135 TYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPC 194
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
++++V+WN +I+C+++ R R+A LF + R E + D +L AC +GALE G
Sbjct: 195 KKNSVSWNAMIACFVKGNRFREAFALFRRM-RVEKKMELDRFVAATMLSACTGVGALEQG 253
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
IH+Y+ + G L ++I MY KCG L AF VF G+ K V SW+ MI G AM+
Sbjct: 254 MWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMH 313
Query: 213 GHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
G G DAI F M+ A V PD TF VL+AC+H GLV+EG + M GI P
Sbjct: 314 GKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKE 373
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HYGC+VDLL RAG L++A ++I M + PD+ + LLGACRIH ++ LGE V +IEL
Sbjct: 374 HYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIEL 433
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+ SG YV+L N+Y+S G WE+V +R+ M+++G++ PG S I ++GVV+EFV
Sbjct: 434 DPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRD 493
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
HP IY + E+ + +++ G+V + LH+L EE+ N L YHSEKLAIA+G+L T
Sbjct: 494 HPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGLLKTK 553
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G T+RV KNLR+C DCH +K++S VY+ ++IIRDR RFHHF G CSC DYW
Sbjct: 554 RGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/507 (40%), Positives = 306/507 (60%), Gaps = 5/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCS--LMGGLQIHARVLR 58
++ YS P++ L +M + + N F + +K S ++ G Q+H LR
Sbjct: 87 LITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLR 146
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + + ++D+Y+ EA +FD + ++ V+WN LI+ Y R + A CL
Sbjct: 147 YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCL 206
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F N+ RE KP T VL ACA +G+LE G+ +H + + G + N+L+ MY
Sbjct: 207 FSNMLRE--NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMY 264
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K GS+ A +VF + ++DVVSW++M++G + +G G+ A++ F M R + P+D TF
Sbjct: 265 AKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFL 324
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL+ACSH GL+DEG + D M K + + P I HY +VDLLGRAG LD+A Q I+ M +
Sbjct: 325 CVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPI 383
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KP + +W LLGACR+HK++ LG E + EL + G +VLL N+Y+ G W ++
Sbjct: 384 KPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKV 443
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M E G++ P CS + ++ VH FV DD +HP+ EI+ M ++I+ ++K GYV +
Sbjct: 444 RKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDS 503
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L + +E+ L YHSEKLA+AF +L TPPG+TIR+ KN+RIC DCH+ K +S +
Sbjct: 504 SHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKL 563
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +G CSC DYW
Sbjct: 564 VEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
C +K C L G IHA +L ++ D + TL++LY+ A KLFDE+
Sbjct: 18 CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS 77
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF- 151
RD V W LI+ Y ++ R +DAL L + R G KP+ T +L+A + +G+ +
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLR--IGLKPNQFTLASLLKAASGVGSTDVL 135
Query: 152 -GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G ++H +GY S + + +++ MY++C L A +F M K+ VSW+A+I+G A
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYA 195
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
G G A F M R V P T++ VL AC+ G +++G M K +G
Sbjct: 196 RKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK-WGEKLVA 254
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++D+ ++G ++ A ++ + K D W ++L
Sbjct: 255 FVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSML 292
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 301/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y EE F++M+ + + + A C ++ GLQIHARV G
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + TL++LY+ +S EA LF EI +D + WN LIS + +++ AL +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVF- 536
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G K + T + + A A+L ++ G+++H + G+ S+ + N+LI++Y K
Sbjct: 537 -MKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGK 595
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M ++ VSW+ +I+ + +G G +A++ F M++ G+ P+D TF GV
Sbjct: 596 CGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGV 655
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV+EG+ + MS +G+ P HY CVVD+LGRAG LD+A + + M +
Sbjct: 656 LAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITA 715
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IWRTLL AC++HK++ +GE +HL+EL+ +S YVLL N Y+ G W ++R+
Sbjct: 716 NAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRK 775
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I +K VH F V D HP ++IY+ L E+N +L GY E +
Sbjct: 776 MMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPN 835
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H E+K HSEKLA+AFG++ PP +RV KNLR+C DCH++ K S V
Sbjct: 836 LFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTR 895
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 896 REIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 4/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ +E F L+ +M + P+ S + C K G IHA+V +
Sbjct: 115 MLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + L+ LY F A ++F ++ D V +N LIS + + AL +FD
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD 234
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG +PD VT +L ACA +G L+ G+++H Y+ + G SL+ +Y K
Sbjct: 235 EM--QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVK 292
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A ++F +VV W+ M+ + E FG MQ G+ P+ T+ +
Sbjct: 293 CGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCI 352
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+ G ++ G + +S G +++ G ++D+ + LD+A +++ M K
Sbjct: 353 LRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKIL-EMLEKR 410
Query: 301 DSTIWRTLLG 310
D W +++
Sbjct: 411 DVVSWTSMIA 420
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ E +F++M+ + + + + C L G Q+H+ +L+ G
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D +L+DLY A +F+ + + V WN+++ Y + + +F
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFG 335
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +G P+ T +L+ C G +E GE+IH ++G+ S M + LI MYSK
Sbjct: 336 QM--QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A ++ + + ++DVVSW++MI+G + +A+ +F MQ GV+PD+
Sbjct: 394 YRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
SAC+ + +G+ R+ G +I + +V+L R G ++A+ L + K
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK- 511
Query: 301 DSTIWRTLL---GACRIHKHVTL 320
D W L+ G R+++ +
Sbjct: 512 DEITWNGLISGFGQSRLYEQALM 534
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 45/370 (12%)
Query: 37 IKCCMKFCSLMGG-----LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI 91
+ C ++ C G L+IHA + G D + L+DLY+ ++A ++F E+
Sbjct: 45 LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
RD V+W ++S Y + ++A L+ ++ + P VL AC
Sbjct: 105 SSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHW--TAVIPTPYVLSSVLSACTKGKLFAQ 162
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G IH + + + S+ + N+LIA+Y GS +A VF M D V+++ +ISG A
Sbjct: 163 GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG-----------LVDEGMMF---- 256
GHG A++ F MQ +G+ PD T +L+AC+ G L+ GM F
Sbjct: 223 CGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282
Query: 257 ----LDRMSK-----------DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GV 298
LD K + G N+ + ++ G+ L +++++ M G+
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYV--LLLNLYSSVGDWEKV 355
P+ + +L C + LGE++ H + +K ES YV +L+++YS +K
Sbjct: 343 HPNKFTYPCILRTCTCTGQIELGEQI--HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKA 400
Query: 356 KELREFMNEK 365
+++ E + ++
Sbjct: 401 RKILEMLEKR 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 133 DVTCLLVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D+TC LQAC G +IH G G+ + N LI +Y+K G + A +VF
Sbjct: 44 DLTC--ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVF 101
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
K + +D VSW AM+SG A G G++A + M V P + VLSAC+ L
Sbjct: 102 KELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFA 161
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G M ++ K + LG G A ++ M + D + TL+
Sbjct: 162 QGRMIHAQVYKQAFCSETFVGNALIALYLG-FGSFKLAERVFCDM-LFCDRVTFNTLISG 219
Query: 312 CRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYS---SVGDWEKVKELREFMNEK 365
H GE ++ E+ Q SG D V + +L + SVGD +K K+L ++ +
Sbjct: 220 ---HAQCGHGECALQIFDEM--QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA 274
Query: 366 GL 367
G+
Sbjct: 275 GM 276
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/506 (40%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y S +E LF++M K + P ++ C K L G ++H +++
Sbjct: 282 MIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G LD L TL+ +Y+ +A + FD + +D+V+++ ++S ++N AL +F
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + SG PD T L VL AC+HL AL+ G H Y+ G+ + +CN+LI MYS
Sbjct: 402 RMM--QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A EVF M D+VSW+AMI G ++G G +A+ F + G+ PDD TF
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LS+CSH GLV EG ++ D MS+DF I+P + H C+VD+LGRAGL+D+A+ I +M +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IW LL ACRIHK++ LGE V + + L + +G++VLL N+YS+ G W+ +R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ GL+ PGCS I + G+VH FV D SH ++++I + L+E+ ++K GY AE +
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
++ EEK L YHSEKLAIAFG+L G I V KNLR+C DCH K ++ +
Sbjct: 700 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVIT 759
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHF+ G C+C D+W
Sbjct: 760 KREITVRDANRFHHFKNGTCNCGDFW 785
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C++ SL +IH L++ DS ++ L LY + + A +LFDEIP
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+ WN +I Y N A+ L+ ++ G +P+ T VL+AC+ L A+E G +IH
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSM--LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G S + +C +L+ Y+KCG L A +F M +DVV+W+AMI+G ++ G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHY 273
DA++ MQ G+ P+ T GVL + G + R S D G++
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG-- 250
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++D+ + L A ++ MGV+ + + W ++G
Sbjct: 251 --LLDMYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGG 285
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 40/348 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ + + L+ M + N + F +K C ++ G++IH+ G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+D Y+ EA +LF + RD VAWN +I+ DA+ L
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI- 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G P+ T + VL AL G+ +H Y + + + + L+ MY+K
Sbjct: 199 -MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTG 239
C L A ++F M ++ VSWSAMI G + ++A+E F M + + P T
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGS 317
Query: 240 VLSAC-----------------------------------SHCGLVDEGMMFLDRMSKDF 264
VL AC + CG++D+ + F D M+
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKD 377
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ + GCV + G A + ++++ G+ PD T +L AC
Sbjct: 378 SVSFSAIVSGCVQN--GNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L +L+AC +L +KIH++ ++ + ++ + L +Y C + +A +F +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
V+ W+ +I A NG AI+ + +M GV P+ T+ VL ACS +++G+
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE- 130
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ +K FG+ ++ +VD + G+L +A +L +SM + D W ++ C ++
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 308/516 (59%), Gaps = 11/516 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ YS + +E LF M + + N + + C++ + IH V++
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D + TLMD+YS K A ++F ++ RD V WN +I+ Y+ ++ DAL L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 120 ---DNLNREES------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
NL R+ S KP+ +T + +L +CA L AL G++IH Y ++ + + +
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++L+ MY+KCG L M+ +VF +P+K+V++W+ +I M+G+G++AI+ M GV
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P++ TF V +ACSH G+VDEG+ M D+G+ P+ HY CVVDLLGRAG + +AY
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 291 QLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
QL+ M + W +LLGA RIH ++ +GE ++LI+L+ + YVLL N+YSS
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W+K E+R M E+G++ PGCS I VH+FV D SHP+ ++ L+ + +++
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+ GYV + + LHN+ +EK L HSEKLAIAFG+L T PGT IRVAKNLR+C DCH
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 854
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + +RE+I+RD RFH F+ G CSC DYW
Sbjct: 855 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 34 SFAIKCCMKFCS-------LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
SF + + CS LM G Q+HA LR G +L+S ++ TL+ +Y K +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKV 257
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
L RD V WN ++S +N++ +AL + E G +PD+ T VL AC+HL
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE--GVEPDEFTISSVLPACSHL 315
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNS-LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G+++H Y ++G + + S L+ MY C + VF GM ++ + W+AM
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 206 ISGLAMNGHGRDAIESF-GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
I+G + N H ++A+ F G + AG+ + T GV+ AC G + K
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR- 434
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
G+ + ++D+ R G +D A ++ M + D W T++ +H
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEH 486
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+ S+ E + M I + +A +K + G QIHA V + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 YQLDS-QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
Y +DS + TL++LY K+FD I +R+ V+WN LIS ++ AL F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLG---ALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+ E +P T + V+ AC++L L G+++H Y G + + N+L+A
Sbjct: 188 RCMLDE--NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVA 244
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY K G L + + +D+V+W+ ++S L N +A+E M GV PD+ T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 237 FTGVLSACSHCGLVDEG 253
+ VL ACSH ++ G
Sbjct: 305 ISSVLPACSHLEMLRTG 321
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 19/287 (6%)
Query: 30 PFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD 89
P A +F++ F S + H + Y L + + D+ S A +F
Sbjct: 4 PLAFTFSLPSIFPFPSQLLPFSRH----KHPYLLRATPTSATEDVASAVSG---APSIF- 55
Query: 90 EIPQRDTVAWNV-LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
I Q + W + L+ +R+ R+A+ + ++ G KPD+ +L+A A L
Sbjct: 56 -ISQSRSPEWWIDLLRSKVRSNLLREAVLTY--VDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 149 LEFGEKIHRYISEHGYG-SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
+E G++IH ++ + GYG + + N+L+ +Y KCG G ++VF + E++ VSW+++IS
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L A+E+F M V P T V++ACS+ + EG+M + + +G+
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQVHAYGLR 230
Query: 268 P---NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
N +V + G+ G L + L+ S G + D W T+L +
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 311/538 (57%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + P + Y F M + + A A+ C K +L G +H V +
Sbjct: 208 LIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKR 267
Query: 61 YQLDSQLMTTLMDLYST------FEKSFEA-----------------CKL---------F 88
++ L+ L+D+Y+ + F+A CKL F
Sbjct: 268 IRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLF 327
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++ RD + +N +I+ YI + R RDAL LF + R G + D+ T + +L ACA LGA
Sbjct: 328 DQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRH--GMRADNFTVVSLLTACASLGA 385
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L G +H I + + L +L+ MY KCG + A VF M E+DV +W+AMI+G
Sbjct: 386 LPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAG 445
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G+DA+ESF M+R G P T+ VL+ACSH L+DEG + + M + P
Sbjct: 446 LAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHP 505
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ HYGC++DLL R+GLLD+A L+ +M ++P++ IW ++L ACR+HK++ L EHL
Sbjct: 506 QVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHL 565
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L +E YV L N+Y W K +R M E+G++ T G S+I + G VH+FV +
Sbjct: 566 LKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVAN 625
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALSYHSEKLAIAFGV 447
D SHP EI M++EI +LK GY + +TS + ++ EEK AL HSEK+AIAFG+
Sbjct: 626 DQSHPWTLEIMAMMEEIACRLKSVGY-SPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGL 684
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ PP I + KNLR+C DCH+ K++S ++NRE+I+RDR RFHHFR+G CSCND+W
Sbjct: 685 ISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 39/282 (13%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +L + P+R+ V+W LI+ Y R R DA+ F+ + + G PD+V + L A
Sbjct: 189 EARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSD--GVAPDEVAVIGALSA 246
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-----PE- 196
C+ L L+ G +H + + NL +LI MY+KCG + A VF + PE
Sbjct: 247 CSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEP 306
Query: 197 --------------------------KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+DV+++++MI+G +G RDA++ F M+R G+
Sbjct: 307 WNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGM 366
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D+ T +L+AC+ G + G + + + +++ ++D+ + G +D+A
Sbjct: 367 RADNFTVVSLLTACASLGALPHGRALHASIEQRI-VEEDVYLGTALLDMYMKCGRVDEAT 425
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ MG + D W ++ + +G+ +E ++K
Sbjct: 426 AVFHRMGER-DVHTWTAMIAGLAFNG---MGKDALESFCQMK 463
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
++I + G L A + PE++VVSW+++I+G + G DA+ F M GV P
Sbjct: 176 TVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAP 235
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRM-SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
D+ G LSACS +D G + + K + N+ ++D+ + G + QA
Sbjct: 236 DEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNL--VVALIDMYAKCGDIAQAQA 293
Query: 292 LITSMGVKPDSTIWRTLL-GACRIHKHVTLGERVIEHL 328
+ ++G W ++ G C++ HV + + + +
Sbjct: 294 VFDAVGRGQKPEPWNAIIDGYCKL-GHVDVARSLFDQM 330
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/531 (38%), Positives = 305/531 (57%), Gaps = 35/531 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+RA+ S PE+ F + ++ P + +F ++ C GLQ+H +R
Sbjct: 85 MIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIR 144
Query: 59 DGYQLDSQLMTTLMDLYSTF------EKSFE---------------AC----------KL 87
G+ D + T L+ LY+ K F AC KL
Sbjct: 145 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKL 204
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F+ +P++D +AWN +IS Y + +R+AL LF + E G K + V+ + VL AC LG
Sbjct: 205 FEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLE--GVKVNGVSMISVLSACTQLG 262
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
AL+ G H YI + + L +L+ +Y+KCG + A EVF GM EK+V +WS+ ++
Sbjct: 263 ALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALN 322
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GLAMNG G ++ F M++ GV P+ TF VL CS G VDEG D M +FGI
Sbjct: 323 GLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIE 382
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + HYGC+VDL RAG L+ A +I M +K + +W +LL A R++K++ LG +
Sbjct: 383 PQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKK 442
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
++EL+ G YVLL N+Y+ DW+ V +R+ M KG++ PGCS + + G VHEF V
Sbjct: 443 MLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFV 502
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHP+ NEI + +I+++L++AGY A+ T + ++ EEK +AL HSEK AIAFG+
Sbjct: 503 GDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGI 562
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
++ IR+ KNLR+C DCH + ++S ++NRE+I+RDR RFHHF++GR
Sbjct: 563 MSLKADVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGR 613
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 188/494 (38%), Positives = 287/494 (58%), Gaps = 5/494 (1%)
Query: 15 FYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
F + +M + + P +F I C+ + G+ IH V++ G + +++ LM
Sbjct: 620 FEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALM 679
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+LY +CKLF+++ ++ V+WN +I +++N + L F N++R G KPD
Sbjct: 680 NLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF-NMSRW-VGLKPD 737
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T L VL+ C +G + + IH I G+ + + +L+ +Y+K G L + VF
Sbjct: 738 QATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFL 797
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+ D ++W+AM++ A +G+GRDAI+ F M G+ PD TFT +L+ACSH GLV+E
Sbjct: 798 EITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEE 857
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + + MSK + I P + HY C+VDL+GR+GLL AY LI M ++P S +W LLGAC
Sbjct: 858 GRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 917
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R++K LG + + L EL+ ++ +Y++L N+YS+ G W+ +R M +KGL G
Sbjct: 918 RVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASG 977
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKG 431
S I +H+FVV D SHP +I + L EI K++K G+ + LH++ + K
Sbjct: 978 YSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKE 1037
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
++ HSEK+A+AFG+L P I + KNLRIC DCH AK +S + R +IIRD RF
Sbjct: 1038 EMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRF 1097
Query: 492 HHFREGRCSCNDYW 505
HHF EG CSC DYW
Sbjct: 1098 HHFLEGSCSCRDYW 1111
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 35/292 (11%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIR 108
QIHA++ DG D L+ + + + ++ A ++ D + A N +I + +
Sbjct: 32 QIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKPTLFALNSMIRAHCK 91
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + + + +G KPD+ T ++QAC LG E G ++H G+ +
Sbjct: 92 SPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDP 151
Query: 169 NLCNSLIAMY-------------------------------SKCGSLGMAFEVFKGMPEK 197
++ LI++Y ++CG + A ++F+GMPEK
Sbjct: 152 HVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEK 211
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
D ++W+AMISG A G R+A+ F MQ GV + + VLSAC+ G +D+G
Sbjct: 212 DPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAH 271
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ ++ I + +VDL + G +D+A ++ M K T W + L
Sbjct: 272 SYIERN-KIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYT-WSSAL 321
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 300/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S + LF M ++ ++ F + +K C ++ G Q+HA ++ G
Sbjct: 495 MMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSG 554
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y LD + + ++D+Y A FD IP D VAW LIS I N AL +F
Sbjct: 555 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFS 614
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G PD+ T + +A + L ALE G +IH + S + SL+ MY+K
Sbjct: 615 QMRL--MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAK 672
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A+ +FK + ++ +W+AM+ GLA +G G++A++ F M+ G+ PD TF GV
Sbjct: 673 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGV 732
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV E ++ M +D+GI P I HY C+ D LGRAGL+ +A LI SM ++
Sbjct: 733 LSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEA 792
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++++RTLL ACR+ G+RV L+EL+ +S YVLL N+Y++ W+++K R
Sbjct: 793 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 852
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ PG S I +K +H FVVDD S+P+ IY+ + ++ + +K GYV E
Sbjct: 853 MMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDF 912
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK AL YHSEKLA+AFG+L+TPP T IRV KNLR+C DCHN K +S VY+
Sbjct: 913 TLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYD 972
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC DYW
Sbjct: 973 REIVLRDANRFHRFKDGICSCGDYW 997
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 30/308 (9%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
F M + + + + ++ SL G Q+H L+ G L + +L+++Y
Sbjct: 310 FMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 369
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
K A +F+ + +RD ++WN +I+ ++ +A+CLF L R G KPD T
Sbjct: 370 LRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR--CGLKPDHYTMT 427
Query: 138 LVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL+A + L L ++IH + + + + +LI YS+ + A EV G
Sbjct: 428 SVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA-EVLFGRNN 486
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
D+V+W+AM+SG + G +E F M + G DD T VL C +++G
Sbjct: 487 FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQG--- 543
Query: 257 LDRMSKDFGILPNIHHY----GCVVDLLGRAGLLD--------QAYQLITSMGVKPDSTI 304
+H Y G +DL +G+LD A Q PD
Sbjct: 544 -----------KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 592
Query: 305 WRTLLGAC 312
W TL+ C
Sbjct: 593 WTTLISGC 600
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
KSFE D + ++ N ++S Y+ + L F ++ ES + D VT +LV
Sbjct: 273 KSFENGN--DASAVSEIISRNKILSGYLHAGQYSALLKCF--MDMVESDLECDQVTFILV 328
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L L +L G+++H + G + + NSLI MY K +G+A VF M E+D+
Sbjct: 329 LATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDL 388
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+SW+++I+G+A + +A+ F + R G+ PD T T VL A S
Sbjct: 389 ISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
LM G HAR+L + L+ L+ +YS A ++FD++P+RD V+WN +++
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 106 YIRN-----QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
Y ++ + ++A LF L ++ +T +L+ C H G + E H Y
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDV--VYTSRMTLSPMLKLCLHSGYVCASESFHGYAC 179
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
+ G + +L+ +Y K G + +F+ MP +DVV W+ M+ G +AI+
Sbjct: 180 KIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 239
Query: 221 SFGAMQRAGVFPDDQTF 237
A +G+ P++ T
Sbjct: 240 LSSAFHTSGLHPNEITL 256
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T L+L C H L E R+ L N+LI+MYSKCGSL A VF M
Sbjct: 59 TSDLMLGKCTHARILALEENPERF-----------LVNNLISMYSKCGSLTYARRVFDKM 107
Query: 195 PEKDVVSWSAMISGLAMNGHG-----RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
PE+D+VSW+++++ A + G ++A F +++ V+ T + +L C H G
Sbjct: 108 PERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V F K G+ + G +V++ + G + + L M + D +W +L
Sbjct: 168 VCASESFHGYACK-IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLML 225
Query: 310 GA 311
A
Sbjct: 226 KA 227
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 1 MVRAYSMSS-----SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
++ AY+ SS + +E F LF +RQ + T+ S +K C+ + H
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGY 177
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
+ G D + L+++Y F K E LF+E+P RD V WN+++ Y+ +A
Sbjct: 178 ACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 237
Query: 116 LCLFDNLNREESGCKPDDVTCLLV 139
+ L + SG P+++T L+
Sbjct: 238 IDLSSAFH--TSGLHPNEITLRLL 259
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/542 (39%), Positives = 317/542 (58%), Gaps = 40/542 (7%)
Query: 1 MVRAYS-MSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M++A++ + +S +F M R N + F K C ++ G QI ++
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 59 DGYQLDSQLMTTLMDLYST----------FEKSFE---------------------ACKL 87
G + + + ++ +Y+ F+ S + A ++
Sbjct: 61 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 120
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FDE+ +RD V+W +I+ Y++ ++AL LF + ++G P++ T L ACA+L
Sbjct: 121 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM--LQTGPPPNEFTLASALAACANLV 178
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK---GMPEKDVVSWSA 204
AL+ G IH YI + L SL+ MY+KCG + A +VF G+ K V W+A
Sbjct: 179 ALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNA 237
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
MI G AM+G ++AI+ F M+ V P+ TF +L+ACSH LV+EG + M+ +
Sbjct: 238 MIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSY 297
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
GI P I HYGC+VDLLGR+GLL +A + + +M + PD+TIW LLGACRIHK + G+R+
Sbjct: 298 GIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRI 357
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
+ + EL + G +VLL NLYS+ G W++ K +R+ + G + TPGCS+I L GV H+
Sbjct: 358 GKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQ 417
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAI 443
F+V D SHP+ ++Y LDE+ +LK AGYV E L ++ EE K ALS HSEKLAI
Sbjct: 418 FLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAI 477
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ TPPGT IR+ KNLR+C DCH K +S VY RE+I+RDR+R+HHF++G CSC D
Sbjct: 478 AFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKD 537
Query: 504 YW 505
YW
Sbjct: 538 YW 539
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 301/509 (59%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R EE L+ M ++ + + F F +K C + G+Q+H V + G
Sbjct: 69 MIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMG 128
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+++Y + AC +F+ + ++ +W+ +I + + + L L
Sbjct: 129 LEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLG 188
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLCNSLIA 176
++ E C+ ++ T + VL AC HLG+ + G+ IH R ISE K SLI
Sbjct: 189 KMS-SEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVK----TSLID 243
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY K G L VFK M EK+ S++ MISGLA++G G++A++ F M G+ PDD
Sbjct: 244 MYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVV 303
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ GV SACSH GLV+EG+ M + I P + HYGC+VDLLGR G+L +AY+LI SM
Sbjct: 304 YVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSM 363
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+KP+ IWR+LL AC++H ++ +G+ E+L L SGDY++L N+Y+ W+ V
Sbjct: 364 SIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVA 423
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R + E+ L TPG S I K V++FV D S P+ N IY+M+ ++ QLK GY+
Sbjct: 424 KIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIP 483
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ + L ++ EEK L +HS+KLAIAFG++ T G+ +R+ +NLR+C DCH + K +S
Sbjct: 484 DTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYIS 543
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE+ +RDRLRFHHF+ G CSC DYW
Sbjct: 544 MIYEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEVFKGMPEKDVVSW 202
H +E +++H ++ + G ++L+A +K GS+ A +F + E +
Sbjct: 7 HNNHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDY 66
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI G + +A+ + M GV PD T+ VL ACS G+VDEG+ + K
Sbjct: 67 NTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFK 126
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G+ ++ ++++ G+ G + A + M K ++ W ++GA
Sbjct: 127 -MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVAS-WSAIIGA 173
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/503 (39%), Positives = 303/503 (60%), Gaps = 3/503 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + LF++M+ K + + + + + C SL G +H+ V+++G
Sbjct: 368 IIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG 427
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+++Y+ EA +F +IP +D V+WN +I Y +N +AL LF
Sbjct: 428 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFL 487
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ ++ KPDD+T VL ACA L AL+ G +IH +I GY S +++ +L+ MY+K
Sbjct: 488 DMQKQ---FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAK 544
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L +A +F +P+KD++SW+ MI+G M+G G +AI +F M+ AG+ PD+ +F+ +
Sbjct: 545 CGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAI 604
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL++EG F + M + G+ P + HY CVVDLL R G L +AY+ I SM +KP
Sbjct: 605 LNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKP 664
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRIH V L E+V EH+ EL+ + YV+L N+Y+ WE+VK+LR+
Sbjct: 665 DTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRK 724
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G + PGCS I + G + FV + HP+ +I +L ++ Q++ Y +
Sbjct: 725 RMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRY 784
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N EK HSEK A+AFG+L PPG T+RV+KN R+C DCH K +S
Sbjct: 785 VLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTK 844
Query: 481 REVIIRDRLRFHHFREGRCSCND 503
E+++RD RFHHF++G CSC D
Sbjct: 845 MEIVLRDSNRFHHFKDGLCSCRD 867
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E LF+KM++ + N + + +KC + ++H VL+ G
Sbjct: 166 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 225
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ ++ +L+ Y F A LFDE+ + D V+WN +I+ + N + + L +F
Sbjct: 226 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF- 284
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G + D T + VL ACA++G L G +H + + + ++ N+L+ MYSK
Sbjct: 285 -IQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 343
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A EVF M + +VSW+++I+ G DAI F MQ GV PD T T +
Sbjct: 344 CGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 403
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ +D+G + K+ G+ N+ ++++ + G +++A + + + VK
Sbjct: 404 VHACACSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK- 461
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
D W T++G + L +E ++++ Q D + +
Sbjct: 462 DIVSWNTMIGG---YSQNLLPNEALELFLDMQKQFKPDDITM 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 150/301 (49%), Gaps = 18/301 (5%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L K + + N + CS ++ C + SL G ++H+ ++ +G +D L L+ +Y
Sbjct: 83 LLTKSKSYELGLNSY-CS-VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYV 140
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ K+FD+I WN+L+S Y + R+++ LF + ++ G + T
Sbjct: 141 NCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKM--QKLGVVGNCYTF 198
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL+ A LG ++ +++H Y+ + G+GS + NSLIA Y K G + A +F + E
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 258
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
DVVSW++MI+G +NG + +E F M GV D T VL AC++ G + G
Sbjct: 259 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG--- 315
Query: 257 LDRMSKDFGILP----NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLG 310
R FG+ + ++D+ + G L+ A ++ MG D+TI W +++
Sbjct: 316 --RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG---DTTIVSWTSIIA 370
Query: 311 A 311
A
Sbjct: 371 A 371
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VLQ CA +LE G+++H I +G L L+ MY CG L ++F +
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+ ++S A G+ R+++ F MQ+ GV + TFT VL + G V E
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ K G N ++ + G ++ A+ L + +PD W +++ C ++
Sbjct: 220 YVLK-LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVN 274
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 302/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y EE F++M+ + + + A C ++ GLQIHARV G
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + TL++LY+ +S EA LF EI +D + WN LIS + +++ + AL +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G K + T + + A A+L ++ G+++H + G+ S+ + N+LI++Y K
Sbjct: 538 KMG--QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGK 595
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M ++ VSW+ +I+ + +G G +A++ F M++ G+ P+D TF GV
Sbjct: 596 CGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGV 655
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV+EG+ + MS +G+ P HY CVVD+LGRAG LD+A + + M +
Sbjct: 656 LAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITA 715
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ IWRTLL AC++HK++ +GE +HL+EL+ +S YVLL N Y+ G W ++R+
Sbjct: 716 NAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRK 775
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I +K VH F V D HP ++IY+ L E+N +L GY E +
Sbjct: 776 MMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPN 835
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H E+K HSEKLA+AFG++ PP +RV KNLR+C DCH++ K S V
Sbjct: 836 LFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTR 895
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 896 REIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 150/310 (48%), Gaps = 4/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S +E F L+ +M + P+ S + C K G IHA+V +
Sbjct: 115 MLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + L+ LY F A ++F ++ D V +N LIS + + AL +FD
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD 234
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG +PD VT +L ACA +G L+ G+++H Y+ + G SL+ +Y K
Sbjct: 235 EM--QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVK 292
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A ++F +VV W+ M+ + E FG MQ G+ P+ T+ +
Sbjct: 293 CGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCI 352
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+ G ++ G + +S G +++ G ++D+ + G LD+A +++ M K
Sbjct: 353 LRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKIL-EMLEKR 410
Query: 301 DSTIWRTLLG 310
D W +++
Sbjct: 411 DVVSWTSMIA 420
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 153/323 (47%), Gaps = 7/323 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ E +F++M+ + + + + C L G Q+H+ +L+ G
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D +L+DLY A +F+ + + V WN+++ Y + + +F
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFG 335
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +G P+ T +L+ C G +E GE+IH ++G+ S M + LI MYSK
Sbjct: 336 QM--QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A ++ + + ++DVVSW++MI+G + +A+ +F MQ GV+PD+
Sbjct: 394 YGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
SAC+ + +G+ R+ G +I + +V+L R G ++A+ L + K
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSLFREIEHK- 511
Query: 301 DSTIWRTLL---GACRIHKHVTL 320
D W L+ G R++K +
Sbjct: 512 DEITWNGLISGFGQSRLYKQALM 534
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 171/370 (46%), Gaps = 45/370 (12%)
Query: 37 IKCCMKFCSLMGG-----LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI 91
+ C ++ C G L+IHA + G D + L+DLY+ ++A ++F E+
Sbjct: 45 LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
RD V+W ++S Y ++ ++A L+ ++ + P VL AC
Sbjct: 105 SSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHW--TAVIPTPYVLSSVLSACTKGKLFAQ 162
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G IH + + + S+ + N+LIA+Y GS +A VF M D V+++ +ISG A
Sbjct: 163 GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG-----------LVDEGMMF---- 256
GHG A++ F MQ +G+ PD T +L+AC+ G L+ GM F
Sbjct: 223 CGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282
Query: 257 ----LDRMSK-----------DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GV 298
LD K + G N+ + ++ G+ L +++++ M G+
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYV--LLLNLYSSVGDWEKV 355
P+ + +L C + LGE++ H + +K ES YV +L+++YS G +K
Sbjct: 343 HPNQFTYPCILRTCTCTGQIELGEQI--HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKA 400
Query: 356 KELREFMNEK 365
+++ E + ++
Sbjct: 401 RKILEMLEKR 410
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 110/242 (45%), Gaps = 16/242 (6%)
Query: 133 DVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D+TC LQAC G +IH G G+ + N LI +Y+K G + A +VF
Sbjct: 44 DLTC--ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVF 101
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
K + +D VSW AM+SG A +G G++A + M V P + VLSAC+ L
Sbjct: 102 KELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFA 161
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G M ++ K + LG G A ++ M + D + TL+
Sbjct: 162 QGRMIHAQVYKQAFCSETFVGNALIALYLG-FGSFKLAERVFCDM-LFCDRVTFNTLISG 219
Query: 312 CRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYS---SVGDWEKVKELREFMNEK 365
H GE ++ E+ Q SG D V + +L + SVGD +K K+L ++ +
Sbjct: 220 ---HAQCGHGECALQIFDEM--QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA 274
Query: 366 GL 367
G+
Sbjct: 275 GM 276
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 294/493 (59%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E KM ++ + F S + + + GL++H R+G+ D + ++L+
Sbjct: 153 EALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLI 212
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ ++ + K+FD +P RD + WN L++ +N +AL +F + ++G +P
Sbjct: 213 DMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRM--LQAGVRPV 270
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
VT ++ C +L +L FG+++H Y+ G+ + + +SLI MY KCG + +A +F
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFD 330
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M DVVSW+AMI G A++G R+A+ F M+ P+ TF VL+ACSH GLVD+
Sbjct: 331 KMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 390
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + MS +GI+P + H+ + D LGRAG LD+AY I+ M +KP +++W TLL AC
Sbjct: 391 GWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRAC 450
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+HK+ L E V + ++EL+ + G +V+L N+YS+ G W + LRE M +KG++ P
Sbjct: 451 RVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPA 510
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
CS I +K +H FV D SHP + I L+ ++Q+ G+V ++ E K
Sbjct: 511 CSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSY 570
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L HSEKLAI FG+++TP GT IRV KNLR+C+DCH K +S + +RE+++RD RFH
Sbjct: 571 VLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFH 630
Query: 493 HFREGRCSCNDYW 505
HF++G CSC D+W
Sbjct: 631 HFKDGNCSCGDFW 643
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 29/337 (8%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARVL 57
+RA + + LF +MR P + S + +K C+ +G G +HA +
Sbjct: 20 IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPAS--LPAALKSCAALGLSALGASLHALAI 77
Query: 58 RDGYQLDSQLMTTLMDLYSTF------------------EKSFEAC-KLFDEIPQRDTVA 98
R G D L++LY +FE+ K+FDE+ +RD V+
Sbjct: 78 RSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVS 137
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
WN L+ R +AL + RE G +PD T VL A ++ G ++H +
Sbjct: 138 WNTLVLGCAEEGRHHEALGFVRKMCRE--GFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+G+ S + + +SLI MY+ C + +VF +P +D + W+++++G A NG +A
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ F M +AGV P TF+ ++ C + + G L G N+ ++D
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQ-LHAYVICGGFEDNVFISSSLID 314
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + G + A+ + M PD W ++ +H
Sbjct: 315 MYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALH 350
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 6 SMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
+ + S EE +F +M Q + P S I C SL G Q+HA V+ G++ +
Sbjct: 247 AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNV 306
Query: 66 QLMTTLMDLY-STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ ++L+D+Y E S C +FD++ D V+W +I Y + R+AL LF+ +
Sbjct: 307 FISSSLIDMYCKCGEISIAHC-IFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERM-- 363
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYSKCGS 183
E KP+ +T L VL AC+H G ++ G K + +S H G + +L + G
Sbjct: 364 ELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGE 423
Query: 184 LGMAFEVFKGMPEKDVVS-WSAMI 206
L A+ M K S WS ++
Sbjct: 424 LDEAYNFISKMQIKPTASVWSTLL 447
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/516 (39%), Positives = 307/516 (59%), Gaps = 11/516 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + EE LF +M + + N + + C++ + IH V++
Sbjct: 371 MITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR 430
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D + LMD+YS K A ++F ++ RD V WN +I+ Y+ ++R DAL +
Sbjct: 431 GLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLML 490
Query: 120 DN---LNREES------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
L R+ S KP+ +T + +L +CA L AL G++IH Y ++ + + +
Sbjct: 491 HKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 550
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++L+ MY+KCG L M+ +VF +P ++V++W+ ++ M+G+ +DAI+ M GV
Sbjct: 551 GSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGV 610
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P++ TF V +ACSH G+V+EG+ M KD+G+ P+ HY CVVDLLGRAG + +AY
Sbjct: 611 KPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAY 670
Query: 291 QLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
QLI + D W +LLGACRIH ++ +GE ++LI+L+ + YVLL N+YSS
Sbjct: 671 QLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 730
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W K E+R M +G++ PGCS I VH+FV D SHP+ ++ L+ + +++
Sbjct: 731 GLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERM 790
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+ GY+ + + LHN+ +EK L HSEKLAIAFG+L T PGT IRVAKNLR+C DCH
Sbjct: 791 RKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 850
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V +RE+I+RD RFHHF+ G CSC DYW
Sbjct: 851 LATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 7/266 (2%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
L+ G Q+HA LR G +L+S ++ TL+ +Y K + L RD V WN ++S
Sbjct: 214 LLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSS 272
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+N++ +AL + E G +PD T VL AC+HL L G+++H Y ++G
Sbjct: 273 LCQNEQFLEALEYLREMVLE--GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSL 330
Query: 166 SKMNLCNS-LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ + S L+ MY C + VF GM ++ + W+AMI+G A N + +A+ F
Sbjct: 331 DENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIE 390
Query: 225 MQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+ AG+ + T GV+ AC G + + K G+ + ++D+ R
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR-GLDRDRFVQNALMDMYSRL 449
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLL 309
G +D A ++ M + D W T++
Sbjct: 450 GKIDIAKRIFGKMEDR-DLVTWNTII 474
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 7/257 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+ S+ E + M I + FA +K + G QIHA V + G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 61 YQLDS-QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
Y +DS + TL++LY K+FD I +R+ V+WN LIS ++ AL F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALE---FGEKIHRYISEHGYGSKMNLCNSLIA 176
+ E+ +P T + V AC++ E G+++H Y G + + N+L+A
Sbjct: 184 RCMLDED--VEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF-IINTLVA 240
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY K G L + + +D+V+W+ ++S L N +A+E M GV PD T
Sbjct: 241 MYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFT 300
Query: 237 FTGVLSACSHCGLVDEG 253
+ VL ACSH ++ G
Sbjct: 301 ISSVLPACSHLEMLRTG 317
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ Y+ S E LF+KM + + + + + C+ L G I +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q +S + TTL++LY+ K +A +FD + ++D V W+ +I Y N ++ + LF
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF- 301
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + KPD + + L +CA LGAL+ GE I H + + + + N+LI MY+K
Sbjct: 302 -LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ FEVFK M EKD+V +A ISGLA NGH + + FG ++ G+ PD TF G+
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C H GL+ +G+ F + +S + + + HYGC+VDL GRAG+LD AY+LI M ++P
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LL CR+ K L E V++ LI L+ +G+YV L N+YS G W++ E+R+
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 540
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
MN+KG++ PG S I L+G VHEF+ DD SHP ++IY L+++ ++++ G+V
Sbjct: 541 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 600
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++ EEK L YHSEKLA+A G+++T G IRV KNLR+C DCH K++S +
Sbjct: 601 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 660
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F G CSCNDYW
Sbjct: 661 REIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 161/332 (48%), Gaps = 10/332 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +R+ + + F +K C + S G+ +H+ V++ G+ D MT+L+
Sbjct: 94 ETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLL 153
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+YS + +A KLFDEIP R V W L S Y + R R+A+ LF + E G KPD
Sbjct: 154 SIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM--VEMGVKPD 211
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ VL AC H+G L+ GE I +Y+ E + +L+ +Y+KCG + A VF
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD- 251
M EKD+V+WS MI G A N ++ IE F M + + PD + G LS+C+ G +D
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 252 --EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G+ +DR L N+ ++D+ + G + + +++ M K D I +
Sbjct: 332 GEWGISLIDRHE----FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK-DIVIMNAAI 386
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVL 341
+ HV L V +L G L
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
C++ QIH ++ D+ L+ L+ F ++ + LF + +N LI
Sbjct: 24 CTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLI 83
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ ++ N + L LF L+ + G T LVL+AC + + G +H + + G
Sbjct: 84 NGFVNNHLFHETLDLF--LSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ + SL+++YS G L A ++F +P++ VV+W+A+ SG +G R+AI+ F
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M GV PD VLSAC H G +D G + M ++ + N +V+L +
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKC 260
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLL 309
G +++A + SM V+ D W T++
Sbjct: 261 GKMEKARSVFDSM-VEKDIVTWSTMI 285
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 305/505 (60%), Gaps = 7/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS + ++ M ++ + N F S ++ C +L Q+H +++ G
Sbjct: 37 MISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIG 93
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + + L+D+YS + + A ++FDE+ D V W+ +I+ + +N +AL LF
Sbjct: 94 LDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFK 153
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G T VL+AC L LE G ++H ++ + Y + L N+L+ MY K
Sbjct: 154 RMKR--AGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCK 209
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF M EKDV+SWS MI+GLA NG+ ++A++ F +M+ G+ P+ T GV
Sbjct: 210 CGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGV 269
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV+EG+ + M + FGI P HYGC++DLLGRAG L +A LI M +P
Sbjct: 270 LFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEP 329
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ WR LL ACR+H++V + + ++ L Q++G YVLL N+Y++ W V E+R
Sbjct: 330 DAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRR 389
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ PGCS I + +H F++ D SHP+I EI L+++ +L GYV +
Sbjct: 390 TMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNF 449
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L E+ ++L YHSEKLAI FG+++ P G TIR+ KNLRIC DCH F K+L+ +
Sbjct: 450 VLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQ 509
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++IRD +R+HHF++G CSC D+W
Sbjct: 510 RIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 11/246 (4%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L+ L+++Y F +A +FD++P R+ V+W +IS Y + AL + RE
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE- 60
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G +P+ T VL+AC L L ++H I + G S + + ++LI +YS+ G L
Sbjct: 61 -GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF M D+V WS++I+G A N G +A+ F M+RAG T T VL AC+
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176
Query: 247 CGLVDEG-MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
L++ G + + + D ++ N ++D+ + G L+ A + M V+ D W
Sbjct: 177 LALLELGRQVHVHVLKYDQDLILN----NALLDMYCKCGSLEDANAVFVRM-VEKDVISW 231
Query: 306 RTLLGA 311
T++
Sbjct: 232 STMIAG 237
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 304/509 (59%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKF-CS---LMGGLQIHARV 56
+ RA +++ EE L+ KM + + ++ F ++ +K C+ C+ L G +IHA +
Sbjct: 149 LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHL 208
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
R GY +MTTL+D+Y+ F A +F+ +P R+ V+W+ +I+CY +N + +AL
Sbjct: 209 TRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + E P+ VT + VLQACA L ALE G IH YI G S + + ++L+
Sbjct: 269 RTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVT 328
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY +CG L + VF M ++DVVSW+++IS ++G+GR AI+ F M G P T
Sbjct: 329 MYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVT 388
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+EG + M +D GI P + HY C+VDLLGRA LD+A +++ M
Sbjct: 389 FVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+P +W +LLG+CRIH +V L ER L L+ + +G+YVLL ++Y+ W++VK
Sbjct: 449 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 508
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+++ + +GLQ PG + ++ ++ FV D +P + +I+ L ++ + +K GY+
Sbjct: 509 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIP 568
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L+ L EEK + HSEKLA+AFG++ T G IR+ KNLR+C DCH F K +S
Sbjct: 569 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 628
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+E+++RD RFH F+ G CSC DYW
Sbjct: 629 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 168/371 (45%), Gaps = 34/371 (9%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R S SSP + Y I CC SL GL++H +L +G
Sbjct: 66 LRVLSQESSPSQQTY-----------------ELLILCCGHRSSLSDGLRVHRHILDNGS 108
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D L T L+ +YS A K+FD+ +R WN L + L L+
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 122 LNREESGCKPDDVTCLLVLQACAH----LGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+NR G + D T VL+AC L G++IH +++ GY S + + +L+ M
Sbjct: 169 MNR--IGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM 226
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQ 235
Y++ G + A VF GMP ++VVSWSAMI+ A NG +A+ +F M + P+
Sbjct: 227 YARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSV 286
Query: 236 TFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
T VL AC+ +++G + ++ R D ILP I +V + GR G LD ++
Sbjct: 287 TMVSVLQACASLAALEQGRLIHGYILRRGLD-SILPVI---SALVTMYGRCGKLDVGQRV 342
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGD 351
M + D W +L+ + +H + ++ E ++ A + +V +L S G
Sbjct: 343 FDRMHDR-DVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 352 WEKVKELREFM 362
E+ K L E M
Sbjct: 402 VEEGKRLFESM 412
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 13/220 (5%)
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++ N LI + + + AL + L++E S P T L++ C H +L G ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRV---LSQESS---PSQQTYELLILCCGHRSSLSDGLRVH 100
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
R+I ++G L LI MYS GS+ A +VF ++ + W+A+ L + GHG
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSAC--SHCGL--VDEGMMFLDRMSKDFGILPNIHH 272
+ + + M R GV D T+T VL AC S C + +G +++ G +++
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRR-GYNSHVYI 219
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+VD+ R G +D A + M V+ + W ++ AC
Sbjct: 220 MTTLVDMYARFGCVDYASYVFNGMPVR-NVVSWSAMI-AC 257
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/507 (40%), Positives = 301/507 (59%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS + LF +M + N F + + C+ + G QIH+ +++
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + ++L+D+Y+ K EA +F +P+RD V+ +IS Y + +AL LF
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L RE G + + VT VL A + L AL+ G+++H ++ S + L NSLI MYSK
Sbjct: 250 RLQRE--GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSK 307
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTG 239
CG+L A +F + E+ V+SW+AM+ G + +G GR+ +E F M V PD T
Sbjct: 308 CGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLA 367
Query: 240 VLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH GL D+GM +F D S + P+ HYGCVVD+LGRAG ++ A++ + M
Sbjct: 368 VLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPF 427
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + IW LLGAC +H ++ +GE V L++++ + +G+YV+L NLY+S G WE V+ L
Sbjct: 428 EPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSL 487
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M +K + PG S I L V+H F D SHPR E+ + E++ + K AGYV ++
Sbjct: 488 RNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDL 547
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH++ E+K L HSEKLA+ FG++ATP IRV KNLRICVDCHNFAK S +
Sbjct: 548 SCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKI 607
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y REV +RD+ RFH G+CSC DYW
Sbjct: 608 YGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 137/261 (52%), Gaps = 11/261 (4%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C++ ++ G ++HA +++ Y L T L+ Y + +A +FD +P+R+ V+W
Sbjct: 68 CLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSW 127
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+IS Y + AL LF + R SG +P++ T VL +C G +IH +I
Sbjct: 128 TAMISAYSQRGYASQALSLFVQMLR--SGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHI 185
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ Y + + + +SL+ MY+K G + A +F+ +PE+DVVS +A+ISG A G +A+
Sbjct: 186 IKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEAL 245
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK----DFGILPNIHHYGC 275
E F +QR G+ + T+T VL+A S +D G + + + + +L N
Sbjct: 246 ELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQN-----S 300
Query: 276 VVDLLGRAGLLDQAYQLITSM 296
++D+ + G L A ++ ++
Sbjct: 301 LIDMYSKCGNLTYARRIFDTL 321
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 145/336 (43%), Gaps = 49/336 (14%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
++ T L ST + F+ +L P N+ +I + R R+AL L+
Sbjct: 1 MLRTKHVLSSTHKAIFQKPRLLSTFPSNSHHVLNI----HIHDTRLREAL-----LHMAL 51
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G + VL C A+ G+++H ++ + Y + L LI Y KC SL
Sbjct: 52 RGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRD 111
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-- 244
A VF MPE++VVSW+AMIS + G+ A+ F M R+G P++ TF VL++C
Sbjct: 112 ARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIG 171
Query: 245 -----------SHC------GLVDEGMMFLDRMSKD---------FGILPNIHHYGCVVD 278
SH V G LD +KD F LP C
Sbjct: 172 SSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAI 231
Query: 279 LLGRA--GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
+ G A GL ++A +L + G++ + + ++L A + G++V HL+
Sbjct: 232 ISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLR--- 288
Query: 334 QESGDYVLLLN----LYSSVGDWEKVKELREFMNEK 365
E YV+L N +YS G+ + + + ++E+
Sbjct: 289 SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHER 324
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/465 (42%), Positives = 290/465 (62%), Gaps = 10/465 (2%)
Query: 49 GLQIHARVLRDGYQLDSQLMTT--------LMDLYSTFEKSFEACKLFDEIPQRDTVAWN 100
GL + ++L G D M + L+D+YS A ++F+ + +R V+W
Sbjct: 235 GLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWT 294
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
+I+ Y R + ++ LF + +E+ P+ +T +L ACA L ALE G++IH +I
Sbjct: 295 SMIAGYAREGLSDMSVRLFHEMEKED--LFPNSITMACILPACASLAALERGQEIHGHIL 352
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
+G+ ++ N+L+ MY KCG+LG+A +F +PEKD+VSW+ MI+G M+G+G +AI
Sbjct: 353 RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIA 412
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
+F M+ +G+ PD+ +F +L ACSH GL+DEG F + M + I P HY C+VDLL
Sbjct: 413 AFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLL 472
Query: 281 GRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV 340
RAG L +AY+ I M ++PD+TIW LL CRI+ V L E+V EH+ EL+ + +G YV
Sbjct: 473 ARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYV 532
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQ 400
LL N+Y+ WE+VK+LRE + +GL+ PGCS I +KG VH FV D SHP N+I
Sbjct: 533 LLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIEL 592
Query: 401 MLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAK 460
+L + ++K G+ ++ L EK AL HSEK+A+AFG+L+ PPG T+RV K
Sbjct: 593 LLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTK 652
Query: 461 NLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NLR+C DCH AK +S + R++I+RD RFHHF++G CSC +W
Sbjct: 653 NLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
CS ++ C S+ G +IH+ + + ++D L + L+ +Y T E ++FD++
Sbjct: 105 CS-VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNL-----NREESGCK-------PDDVTCLLVL 140
WN+L++ Y + R++L LF + R ES K D ++ ++
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223
Query: 141 QACAHLGALEFGEKIHRYISEHGYGS--------KMNLCNSLIAMYSKCGSLGMAFEVFK 192
G E G + + G + ++ L N L+ MYSK G+L A +VF+
Sbjct: 224 SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFE 283
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M E+ VVSW++MI+G A G ++ F M++ +FP+ T +L AC+ ++
Sbjct: 284 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALER 343
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + ++ G + H +VD+ + G L A +L+ M + D W ++
Sbjct: 344 GQEIHGHILRN-GFSLDRHVANALVDMYLKCGALGLA-RLLFDMIPEKDLVSWTVMIAGY 401
Query: 313 RIHKH 317
+H +
Sbjct: 402 GMHGY 406
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + LF +M ++ + N + + C +L G +IH +LR+G
Sbjct: 296 MIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNG 355
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD + L+D+Y A LFD IP++D V+W V+I+ Y + +A+ F+
Sbjct: 356 FSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFN 415
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ SG +PD+V+ + +L AC+H G L+ G + + K ++ + +
Sbjct: 416 EM--RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLA 473
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G+L A++ K MP E D W A++ G
Sbjct: 474 RAGNLSKAYKFIKMMPIEPDATIWGALLCG 503
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 320/509 (62%), Gaps = 4/509 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMK---FCSLM-GGLQIHARV 56
+ RA +++ E L+ +M + +P++ F ++ +K C+ F SL+ G +IH +
Sbjct: 150 LFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHI 209
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
LR G++ +MTTL+D+Y+ F A ++FD++P ++ V+W+ +I+CY +N + +AL
Sbjct: 210 LRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEAL 269
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + E P+ VT + VLQACA L ALE G+ +H YI G S + + ++L+
Sbjct: 270 ELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVT 329
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+Y++CG+L + VF+ M ++DVVSW+++IS ++G GR AI+ F M G+ P +
Sbjct: 330 VYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPIS 389
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL ACSH GLV+EG + + M + I P++ HY C+VDLLGRA LD+A ++I M
Sbjct: 390 FVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++P +W +LLG+CRIH +V L ER L EL+ +G+YVLL ++Y+ W +VK
Sbjct: 450 RIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVK 509
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++ + +GLQ PG S I ++ ++ F+ D +P+I +++ +L +++ ++K GYV
Sbjct: 510 RVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVP 569
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L++L EEK + HSEKLA+AFG++ + G TIR+ KNLR+C DCH+ K +S
Sbjct: 570 DTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFIS 629
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+++RD RFH F++G CSC DYW
Sbjct: 630 KFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 161/336 (47%), Gaps = 17/336 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
I C + SL G+ +H ++ DG D L T L+++YS + A K+FD+ +R
Sbjct: 85 ILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTI 144
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC----AHLGALEFG 152
WN L R+ L L+ +NR G D T VL+AC A + L G
Sbjct: 145 YVWNALFRALTLAGYGREVLDLYRRMNR--IGVPSDRFTYTYVLKACVASEAFVSLLLNG 202
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+IH +I HG+ +++ +L+ MY++ G + A VF MP K+VVSWSAMI+ + N
Sbjct: 203 REIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKN 262
Query: 213 GHGRDAIESFGAM--QRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGIL 267
G +A+E F M + + P+ T VL AC+ +++G + ++ R D IL
Sbjct: 263 GKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLD-SIL 321
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + +V + R G L+ +++ M K D W +L+ + IH ++ +
Sbjct: 322 PVV---SALVTVYARCGNLELGHRVFERME-KRDVVSWNSLISSYGIHGFGRKAIQIFKE 377
Query: 328 LIELKAQESG-DYVLLLNLYSSVGDWEKVKELREFM 362
+I+ S +V +L S G E+ K L E M
Sbjct: 378 MIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESM 413
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 115 ALCLFDNLNRE----ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+LC NLN+ P T L++ +C +L G +HR++ G L
Sbjct: 56 SLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFL 115
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
LI MYS+ S+ A +VF ++ + W+A+ L + G+GR+ ++ + M R GV
Sbjct: 116 ATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGV 175
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-------GILPNIHHYGCVVDLLGRA 283
D T+T VL AC + E + L ++ G ++H ++D+ R
Sbjct: 176 PSDRFTYTYVLKAC----VASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARF 231
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + A ++ M VK + W ++ AC
Sbjct: 232 GCVLNASRVFDQMPVK-NVVSWSAMI-AC 258
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/498 (41%), Positives = 291/498 (58%), Gaps = 9/498 (1%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
SP LF M + +P + F +K + + + G+ + +
Sbjct: 64 SPTGAISLFSHMHRNSVPFDHFTFPLILKHHHHHLLH-------SLIFKLGFDTNIFVQN 116
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
L++ Y + A KLFDE+ +RD V+W+ LISC ++N +AL +F +
Sbjct: 117 ALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDI 176
Query: 130 KP--DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+ D L V+ A + LG +E G +H +I G + L +LI MYS+CG + +
Sbjct: 177 RNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRS 236
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+VF MPE++VV+W+A+I+GLA++G R+A++ F M+ +G+ PD F GVL ACSH
Sbjct: 237 VKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHG 296
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GLV++G + M +FGI P + HYGC+VDLLGRAGL+ +A+ + M +KP+S IWRT
Sbjct: 297 GLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRT 356
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGAC H H+ L E+ E +IEL GDYVLL N Y VG+W LR M + +
Sbjct: 357 LLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMKQNRI 416
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
PG S + + VVHEFV D HP+ EI + L I +K+ GY +S LH++
Sbjct: 417 VKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNTSSVLHDIQD 476
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
EEK + L YHSEKLA+AF +L TIRV KNLRIC DCH+F K SG+++R++IIRD
Sbjct: 477 EEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHDFMKHASGIFDRDIIIRD 536
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHF +G CSC D+W
Sbjct: 537 RNRFHHFSKGLCSCQDFW 554
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/454 (42%), Positives = 285/454 (62%), Gaps = 5/454 (1%)
Query: 54 ARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
AR + DG + D T++ Y+ + A ++F+ + RD +W+ ++S Y + +R+
Sbjct: 125 ARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRS 184
Query: 113 RDALCLFDNLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
+DAL L+ + + C PD T + VL AC+ +GAL G ++H+++ +G + L
Sbjct: 185 KDALELWREMR---AACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLG 241
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+LI MY+KCG + + VF MP KDV++WS+MI GLA +G G DA+ F M G+
Sbjct: 242 TALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQ 301
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P++ TF GVL +C+H GLV +G + MS G+ P + HYGC+VDLLGR+G +++A Q
Sbjct: 302 PNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQ 361
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
LI M +PD+ IWR LLGACRI+K+V + E + L L G YVLL N+Y+
Sbjct: 362 LIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANS 421
Query: 352 WEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI 411
WE V E+R + + +Q PG S+I + +HEF+ D SHPR EIY+ML E+ +L+
Sbjct: 422 WEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQ 481
Query: 412 AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNF 471
AGY L ++ + K AL+ HSEKLA+AFG+L TP G+T+R+ KNLR C DCH+
Sbjct: 482 AGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSA 541
Query: 472 AKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K+++ +Y R++IIRDR RFHHF EGRCSC DYW
Sbjct: 542 IKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ ++ L+ +MR + + + C +L G ++H V +G
Sbjct: 174 MMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNG 233
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD +L T L+D+Y+ + ++F +P +D + W+ +I + DAL LF
Sbjct: 234 VELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFS 293
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ E G +P++VT + VL +C HLG + G+K +S HG K+ ++ +
Sbjct: 294 RMLSE--GLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLG 351
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G + A ++ + MP E D V W A++
Sbjct: 352 RSGHIEEAKQLIRDMPFEPDAVIWRALL 379
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG---------------- 213
LCN ++A Y G + A VF GM E+D+VSW+ MI G A+NG
Sbjct: 108 LCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRD 167
Query: 214 ---------------HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+DA+E + M+ A V PD T VLSACS G + G +
Sbjct: 168 AFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAE-VH 226
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + G+ ++ ++D+ + G ++ + ++ SM VK D W +++
Sbjct: 227 QFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK-DVLTWSSMI 276
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/509 (39%), Positives = 317/509 (62%), Gaps = 6/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + S + E L+ +M + I + + + +K C +L G ++H+R L+ G
Sbjct: 108 LIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLG 167
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ----RDTVAWNVLISCYIRNQRTRDAL 116
+ + + +M+LY + +A ++F+E+P+ +DTV W +I ++RN+ T AL
Sbjct: 168 FSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRAL 227
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + E +P++ T + VL AC+ LGALE G +H Y+ + + + N+LI
Sbjct: 228 EAFRGMQGE--NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALIN 285
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MYS+CGS+ A VF M ++DV++++ MISGL+MNG R AIE F M + P + T
Sbjct: 286 MYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVT 345
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F GVL+ACSH GLVD G M++D+ + P I HYGC+VDLLGR G L++AY LI +M
Sbjct: 346 FVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 405
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+ PD + TLL AC++HK++ LGE+V + L + +SG YVLL ++Y+S G W++
Sbjct: 406 KMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAA 465
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R M E G+Q PGCS+I + +HEF++ D+ HP+ IY+ L+E+N+ L++ GY
Sbjct: 466 QVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHP 525
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
E L ++ EK AL+ HSE+LAI +G+++T P T IRV KNLR+C DCH+ K+++
Sbjct: 526 EKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIA 585
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R++++RDR RFH+F G CSC DYW
Sbjct: 586 KITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 8/266 (3%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
L IHA+++R+G+ D ++ L+ S A ++F + + LI ++ +
Sbjct: 56 LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 115
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+A+ L+ + E PD+ +L+AC AL G ++H + G+ S
Sbjct: 116 GNYLEAIQLYSRMLHE--SILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRL 173
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPE----KDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ ++ +Y KCG LG A VF+ MPE KD V W+AMI G N A+E+F M
Sbjct: 174 VRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGM 233
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q V P++ T VLSACS G ++ G M K F I N+ ++++ R G
Sbjct: 234 QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGS 292
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGA 311
+D+A + M + D + T++
Sbjct: 293 IDEAQTVFDEMKDR-DVITYNTMISG 317
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 7/181 (3%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D + +LQ H+ + IH + +G+ + L+ SKC ++ A +F
Sbjct: 38 DQKQIISLLQRSRHINQVL---PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 94
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ +V ++A+I G +G+ +AI+ + M + PD+ +L AC +
Sbjct: 95 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 154
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTL 308
EG R K G N +++L G+ G L A ++ M V D+ W +
Sbjct: 155 EGREVHSRALK-LGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 213
Query: 309 L 309
+
Sbjct: 214 I 214
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 302/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + ++ F +M + I ++ + A+ C +L G QIHA+ G
Sbjct: 522 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 581
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L+ LYS K E+ F++ D +AWN L+S + ++ +AL +F
Sbjct: 582 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 641
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+NRE G ++ T ++A + ++ G+++H I++ GY S+ +CN+LI+MY+K
Sbjct: 642 RMNRE--GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 699
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A + F + K+ VSW+A+I+ + +G G +A++SF M + V P+ T GV
Sbjct: 700 CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGV 759
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVD+G+ + + M+ ++G+ P HY CVVD+L RAGLL +A + I M +KP
Sbjct: 760 LSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKP 819
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ +WRTLL AC +HK++ +GE HL+EL+ ++S YVLL NLY+ W+ R+
Sbjct: 820 DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQ 879
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ PG S I +K +H F V D +HP +EI++ ++ K+ GYV + S
Sbjct: 880 KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFS 939
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+ L E+K + HSEKLAI+FG+L+ P I V KNLR+C DCH + K +S V N
Sbjct: 940 LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSN 999
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 1000 REIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 179/387 (46%), Gaps = 41/387 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
M++ + + E F LF +M + + N S ++ C + QIHAR+L
Sbjct: 117 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 176
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + + L+DLYS A ++FD + +D +W +IS +N+ +A+ LF
Sbjct: 177 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 236
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ G P VL AC + +LE GE++H + + G+ S +CN+L+++Y
Sbjct: 237 CDMYV--LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 294
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
G+L A +F M ++D V+++ +I+GL+ G+G A+E F M G+ PD T
Sbjct: 295 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 354
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA---------------- 283
++ ACS G + G L + G N G +++L +
Sbjct: 355 LVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 413
Query: 284 ------------GLLD---QAYQLITSMGVK---PDSTIWRTLLGACRIHKHVTLGERVI 325
GLLD ++++ M ++ P+ + ++L C + LGE++
Sbjct: 414 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 473
Query: 326 EHLIELKAQESGDYV--LLLNLYSSVG 350
+I+ Q + YV +L+++Y+ +G
Sbjct: 474 SQIIKTNFQLNA-YVCSVLIDMYAKLG 499
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 4/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ S E+ LF++M + + + + C +L G Q+HA + G
Sbjct: 320 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 379
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++++ L++LY+ A F E + V WNV++ Y R++ +F
Sbjct: 380 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 439
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ EE P+ T +L+ C LG LE GE+IH I + + +C+ LI MY+K
Sbjct: 440 QMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 497
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A+++ KDVVSW+ MI+G A+ +F M G+ D+ T
Sbjct: 498 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 557
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC+ + EG + G ++ +V L R G ++++Y L
Sbjct: 558 VSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAG 615
Query: 301 DSTIWRTLL 309
D+ W L+
Sbjct: 616 DNIAWNALV 624
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 42/389 (10%)
Query: 4 AYSMSSSPEEGFY--LFEKMRQKRIPTNPFACSFAIKCCMKFC-SLMGGLQIHARVLRDG 60
A S+ S +E F + + + I N + ++ C+K SL G ++H+++L+ G
Sbjct: 16 AISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG 75
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L D Y + A K+FDE+P+R WN +I + LF
Sbjct: 76 LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFV 135
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG--EKIHRYISEHGYGSKMNLCNSLIAMY 178
+ E P++ T VL+AC G++ F E+IH I G +CN LI +Y
Sbjct: 136 RMVSE--NVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 192
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+ G + +A VF G+ KD SW AMISGL+ N +AI F M G+ P F+
Sbjct: 193 SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 252
Query: 239 GVLSACSHCGLVD-----EGMMFLDRMSKD-------------FGILPNIHH-------- 272
VLSAC ++ G++ S D G L + H
Sbjct: 253 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 312
Query: 273 ----YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
Y +++ L + G ++A +L M G++PDS +L+ AC + G+++
Sbjct: 313 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 372
Query: 326 EHLIELK-AQESGDYVLLLNLYSSVGDWE 353
+ +L A + LLNLY+ D E
Sbjct: 373 AYTTKLGFASNNKIEGALLNLYAKCADIE 401
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 298/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ Y+ + E LF+KM + + + + + C+ L G I +
Sbjct: 183 LFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEME 242
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q +S + TTL++LY+ K +A +FD + ++D V W+ +I Y N ++ + F
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFF- 301
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + KPD + + L +CA LGAL+ GE I H + + + + N+LI MY+K
Sbjct: 302 -LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ FEVFK M EKD+V +A ISGLA NGH + + FG ++ G+ PD TF G+
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C H GL+ +G+ F + +S + + + HYGC+VDL GRAG+LD AY+LI M ++P
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LL CR+ K L E V++ LI L+ +G+YV L N+YS G W++ E+R+
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRD 540
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
MN KG++ PG S I L+G VHEF+ DD SHP ++IY L+++ ++++ G+V
Sbjct: 541 MMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 600
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++ EEK L +HSEKLA+AFG+++T G IRV KNLR+C DCH K++S +
Sbjct: 601 VFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 660
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F G CSCNDYW
Sbjct: 661 REIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 10/332 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +R+ + + F +K C + + G+ +H+ V++ G+ D MT+L+
Sbjct: 94 ETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLL 153
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+YS + +A K+F+EIP+R V W L S Y + R+A+ LF + E G +PD
Sbjct: 154 SIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM--VEMGVRPD 211
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ VL AC H+G L+ GE I +++ E + +L+ +Y+KCG + A VF
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD- 251
M EKD+V+WS MI G A N ++ IE F M + + PD + G LS+C+ G +D
Sbjct: 272 SMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 252 --EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G+ +DR L N+ ++D+ + G + + +++ M K D I +
Sbjct: 332 GEWGISLIDRHE----FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK-DIVIMNAAI 386
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVL 341
+ HV L V +L G L
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 5/274 (1%)
Query: 37 IKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
IK + S L Q+H ++ D+ L+ L+ F ++ + LF +
Sbjct: 16 IKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPN 75
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
+N LI+ ++ N + L LF L+ + G T LVL+AC + G +
Sbjct: 76 IFLYNTLINGFVNNHLFHETLDLF--LSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDL 133
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + G+ + SL+++YS G L A +VF+ +PE+ VV+W+A+ SG G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKH 193
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
R+AI+ F M GV PD VLSAC H G +D G + M ++ + N
Sbjct: 194 REAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHM-EEMEMQKNSFVRTT 252
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+V+L + G +++A + SMG K D W T++
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMGEK-DIVTWSTMI 285
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 302/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + ++ F +M + I ++ + A+ C +L G QIHA+ G
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L+ LYS K E+ F++ D +AWN L+S + ++ +AL +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+NRE G ++ T ++A + ++ G+++H I++ GY S+ +CN+LI+MY+K
Sbjct: 682 RMNRE--GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A + F + K+ VSW+A+I+ + +G G +A++SF M + V P+ T GV
Sbjct: 740 CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGV 799
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVD+G+ + + M+ ++G+ P HY CVVD+L RAGLL +A + I M +KP
Sbjct: 800 LSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKP 859
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ +WRTLL AC +HK++ +GE HL+EL+ ++S YVLL NLY+ W+ R+
Sbjct: 860 DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQ 919
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ PG S I +K +H F V D +HP +EI++ ++ K+ GYV + S
Sbjct: 920 KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFS 979
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+ L E+K + HSEKLAI+FG+L+ P I V KNLR+C DCH + K +S V N
Sbjct: 980 LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSN 1039
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 1040 REIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 179/387 (46%), Gaps = 41/387 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
M++ + + E F LF +M + + N S ++ C + QIHAR+L
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + + L+DLYS A ++FD + +D +W +IS +N+ +A+ LF
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ G P VL AC + +LE GE++H + + G+ S +CN+L+++Y
Sbjct: 277 CDMYV--LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
G+L A +F M ++D V+++ +I+GL+ G+G A+E F M G+ PD T
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA---------------- 283
++ ACS G + G L + G N G +++L +
Sbjct: 395 LVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 284 ------------GLLD---QAYQLITSMGVK---PDSTIWRTLLGACRIHKHVTLGERVI 325
GLLD ++++ M ++ P+ + ++L C + LGE++
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 326 EHLIELKAQESGDYV--LLLNLYSSVG 350
+I+ Q + YV +L+++Y+ +G
Sbjct: 514 SQIIKTNFQLNA-YVCSVLIDMYAKLG 539
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 4/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ S E+ LF++M + + + + C +L G Q+HA + G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++++ L++LY+ A F E + V WNV++ Y R++ +F
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ EE P+ T +L+ C LG LE GE+IH I + + +C+ LI MY+K
Sbjct: 480 QMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A+++ KDVVSW+ MI+G A+ +F M G+ D+ T
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC+ + EG + G ++ +V L R G ++++Y L
Sbjct: 598 VSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAG 655
Query: 301 DSTIWRTLL 309
D+ W L+
Sbjct: 656 DNIAWNALV 664
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 42/389 (10%)
Query: 4 AYSMSSSPEEGFY--LFEKMRQKRIPTNPFACSFAIKCCMKFC-SLMGGLQIHARVLRDG 60
A S+ S +E F + + + I N + ++ C+K SL G ++H+++L+ G
Sbjct: 56 AISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG 115
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L D Y + A K+FDE+P+R WN +I + LF
Sbjct: 116 LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFV 175
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG--EKIHRYISEHGYGSKMNLCNSLIAMY 178
+ E P++ T VL+AC G++ F E+IH I G +CN LI +Y
Sbjct: 176 RMVSE--NVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 232
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+ G + +A VF G+ KD SW AMISGL+ N +AI F M G+ P F+
Sbjct: 233 SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292
Query: 239 GVLSACSHCGLVD-----EGMMFLDRMSKD-------------FGILPNIHH-------- 272
VLSAC ++ G++ S D G L + H
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 273 ----YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
Y +++ L + G ++A +L M G++PDS +L+ AC + G+++
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 326 EHLIELK-AQESGDYVLLLNLYSSVGDWE 353
+ +L A + LLNLY+ D E
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIE 441
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 308/542 (56%), Gaps = 39/542 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ + PE LF +M+ I + F C G QIHA+V ++
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNL 242
Query: 61 YQLDSQLM--TTLMDLYS------TFEKSFE--------------------------ACK 86
+DS ++ + ++D+Y+ E+ F A K
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARK 302
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LF+ + +RD ++W +IS Y + + +AL LF + E G KPD+VT + VL ACA L
Sbjct: 303 LFNHMHERDVISWTAMISGYSQAGQCSEALELFKEM--EALGIKPDEVTLVAVLSACARL 360
Query: 147 GALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK--GMPEKDVVSWS 203
GA + G+++ H+YI + L +++ MY+KCGS+ A E+F+ G K ++
Sbjct: 361 GAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFN 420
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MI+GLA +G G AI F + G+ PD+ TF GVL AC H GL++EG + M
Sbjct: 421 SMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNA 480
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+GI P + HYGC+VDLLGR G L++AY L+ M + +S IWR LL ACR H +V +GE
Sbjct: 481 YGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEI 540
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
+ L+E++AQ YVLL N+ + WE+ +++R+ M + G++ PG S I L G +H
Sbjct: 541 AGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIH 600
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
FV D SHP+ EI ML ++ +LK AGYV + ++ EEK + +SYHSEKLA+
Sbjct: 601 RFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLAL 660
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ P TIR+ KNLRIC DCH K++S +Y RE+ +RD +RFHHFR G CSC D
Sbjct: 661 AFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMD 720
Query: 504 YW 505
+W
Sbjct: 721 FW 722
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 153/332 (46%), Gaps = 37/332 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+R YS S +P E L+ M K I P N F F + C + SL G ++H+ +++
Sbjct: 81 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G++ D + L+ LYS F A LFDE RD V++N +I Y + ALCLF
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----------------------- 156
+ + SG PD+ T + + C+ L G++IH
Sbjct: 201 GEM--QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDM 258
Query: 157 -----------RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
R S G +S++ Y++CG + +A ++F M E+DV+SW+AM
Sbjct: 259 YAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAM 318
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
ISG + G +A+E F M+ G+ PD+ T VLSAC+ G D G + ++
Sbjct: 319 ISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGV 378
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
N V+D+ + G +D A ++ +G
Sbjct: 379 FNQNTILTAAVMDMYAKCGSIDSALEIFRRVG 410
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 168/335 (50%), Gaps = 9/335 (2%)
Query: 39 CCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTF--EKSFEACKL-FDEIPQR 94
C ++ C S GLQIHA+ + +G ++ L+ +S + + +L F +I
Sbjct: 14 CLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCP 73
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+ WN +I Y R+ R+A+ L+ ++ + P++ T +L +CA L +LE G +
Sbjct: 74 NLFMWNTMIRGYSRSDNPREAIVLYMSM-IAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H +I +HG+ S + + N+LI +YS G+L +A +F +D+VS++ MI G A
Sbjct: 133 VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQ 192
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-GILPNIHHY 273
A+ FG MQ +G+ PD+ TF + S CS + G ++ K+ I NI
Sbjct: 193 PESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLK 252
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
+VD+ + GL++ A ++ ++MG + W +++ + + ++ H+ E
Sbjct: 253 SAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE--- 309
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
++ + +++ YS G + EL + M G++
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 288/486 (59%), Gaps = 17/486 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + LQ+HA + R G D +LMTTL+D Y+ A K+F
Sbjct: 153 DALSLSFALKATARCSDAFATLQLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVF 212
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCL-------FDNLNREESGCKPDDVTCLLVLQ 141
DE+P RD WN L++ + AL L F L E +P+ VT + L
Sbjct: 213 DEMPVRDVATWNALLAGLAQGTEPNLALLLFRRLAGSFRELPPRE---EPNAVTVVAALS 269
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD--V 199
ACA LG L+ G +H + G + + N+LI MYSKCGSL A EVF + +D +
Sbjct: 270 ACAQLGTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSKCGSLSRALEVFHSIKLEDRTL 329
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
VS++A I L+++GHG DA++ F M A + PD+ T+ V+ C+H GLVD+G D
Sbjct: 330 VSYNATIQALSIHGHGEDALKLFDEMP-ARIEPDEITYLAVMGGCNHAGLVDDGRRVFDS 388
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
M + PN+ HYG +VDLLGRAG L +AY +I SM D +W+TLLGA ++H +V
Sbjct: 389 MR----VPPNMKHYGTIVDLLGRAGRLAEAYDMIMSMPFPADIVLWQTLLGAAKMHGNVD 444
Query: 320 LGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
L E L +L + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 445 LAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEID 504
Query: 380 GVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSE 439
GV+H+F+ D H R EIY+ LDEI ++ GY E ++ LH++G EEK ALSYHSE
Sbjct: 505 GVMHKFINGDKEHMRWREIYRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSE 564
Query: 440 KLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRC 499
KLAIAFG+++TPPG TIRV KNLR C DCH AK++S YNR +IIRDR RFH F +G C
Sbjct: 565 KLAIAFGLISTPPGETIRVIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARFHRFEDGHC 624
Query: 500 SCNDYW 505
SC DYW
Sbjct: 625 SCRDYW 630
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 288/486 (59%), Gaps = 17/486 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + LQ+HA + R G D +LMTTL+D Y+ A K+F
Sbjct: 119 DALSLSFALKATARCSDAFATLQLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVF 178
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCL-------FDNLNREESGCKPDDVTCLLVLQ 141
DE+P RD WN L++ + AL L F L E +P+ VT + L
Sbjct: 179 DEMPVRDVATWNALLAGLAQGTEPNLALLLFRRLAGSFRELPPRE---EPNAVTVVAALS 235
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD--V 199
ACA LG L+ G +H + G + + N+LI MYSKCGSL A EVF + +D +
Sbjct: 236 ACAQLGTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSKCGSLSRALEVFHSIKLEDRTL 295
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
VS++A I L+++GHG DA++ F M A + PD+ T+ V+ C+H GLVD+G D
Sbjct: 296 VSYNATIQALSIHGHGEDALKLFDEMP-ARIEPDEITYLAVMGGCNHAGLVDDGRRVFDS 354
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
M + PN+ HYG +VDLLGRAG L +AY +I SM D +W+TLLGA ++H +V
Sbjct: 355 MR----VPPNMKHYGTIVDLLGRAGRLAEAYDMIMSMPFPADIVLWQTLLGAAKMHGNVD 410
Query: 320 LGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
L E L +L + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 411 LAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEID 470
Query: 380 GVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSE 439
GV+H+F+ D H R EIY+ LDEI ++ GY E ++ LH++G EEK ALSYHSE
Sbjct: 471 GVMHKFINGDKEHMRWREIYRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSE 530
Query: 440 KLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRC 499
KLAIAFG+++TPPG TIRV KNLR C DCH AK++S YNR +IIRDR RFH F +G C
Sbjct: 531 KLAIAFGLISTPPGETIRVIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARFHRFEDGHC 590
Query: 500 SCNDYW 505
SC DYW
Sbjct: 591 SCRDYW 596
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/496 (38%), Positives = 299/496 (60%), Gaps = 4/496 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE + ++M ++ + + F S + + ++ G +IH +R G+ D + ++L
Sbjct: 181 EEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSL 240
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + + F + RD ++WN +I+ ++N R L F + +E+ KP
Sbjct: 241 IDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEK--VKP 298
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
V+ V+ ACAHL AL G+++H YI G+ + +SL+ MY+KCG++ MA +F
Sbjct: 299 MQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIF 358
Query: 192 KG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
M ++D+VSW+A+I G AM+GH DA+ F M GV P F VL+ACSH GL
Sbjct: 359 NKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGL 418
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
VDEG + + M +DFG+ P + HY V DLLGRAG L++AY I++MG +P ++W TLL
Sbjct: 419 VDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLL 478
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
ACR HK++ L E+V+ ++ + G +V++ N+YS+ W +LR M + GL+
Sbjct: 479 AACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKK 538
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
TP CS I + VH F+ D SHP ++I + L+ + +Q++ GYV + LH++ E
Sbjct: 539 TPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEH 598
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K + L HSE+LAIAFG+++T GTTIRV KN+R+CVDCH K ++ + RE+I+RD
Sbjct: 599 KRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNS 658
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF+ G CSC DYW
Sbjct: 659 RFHHFKNGSCSCGDYW 674
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 26/302 (8%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC----------------------KLF 88
+HA V+R G+ D LM++YS F KLF
Sbjct: 97 SLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLF 156
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D +P RD V+WN +I+ +N +AL + + +E +PD T +L
Sbjct: 157 DRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKE--NLRPDSFTLSSILPIFTEHAN 214
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+ G++IH Y HG+ + + +SLI MY+KC + ++ F + +D +SW+++I+G
Sbjct: 215 VTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAG 274
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
NG + F M + V P +F+ V+ AC+H ++ G + + G
Sbjct: 275 CVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR-LGFDD 333
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGV-KPDSTIWRTLLGACRIHKHVTLGERVIEH 327
N ++D+ + G + A + + + D W ++ C +H H + E
Sbjct: 334 NKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEE 393
Query: 328 LI 329
++
Sbjct: 394 ML 395
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 301/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ ++ F +F+ M + + + + C ++ G IH +R+
Sbjct: 233 MISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNS 292
Query: 61 YQLDSQLMT-TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
++ T +L+++Y +A +LF+ + +DTV+WN +I Y RN ++L LF
Sbjct: 293 IGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLF 352
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + SG PD VT + VL AC + AL +G IH Y+ + G+ + + +L+ MYS
Sbjct: 353 RRMALDGSG--PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYS 410
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGSL + VF MP+K +VSWSAM++G ++G GR+AI M+ V PD+ FT
Sbjct: 411 KCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTS 470
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLV EG +M K++ + P + HY C+VDLLGRAG LD+AY +I +M +K
Sbjct: 471 ILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIK 530
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P S IW LL A R+HK++ L E + + ++ + Y+ L N+Y++ W+ V+ +R
Sbjct: 531 PTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVR 590
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ KGL+ +PGCS I L +VH F+V D SH + +IY L+E+ +QLK AGY + +
Sbjct: 591 AMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTS 650
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+++ E K L HSE+LAIAF ++ T PGT IR+ KNLR+C DCH K++S +
Sbjct: 651 LVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELT 710
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +G CSC DYW
Sbjct: 711 GREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 195/464 (42%), Gaps = 70/464 (15%)
Query: 24 KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG-YQLDSQLMTTLMDLYSTFEKSF 82
++ P C ++ S G Q+HA ++ + ++ L T L Y+
Sbjct: 53 QQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMS 112
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE--SGCKPDDVTCLLVL 140
+A +FD I +++ WN +I Y N +L L+ RE G + D+ T VL
Sbjct: 113 QAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLY----REMLCFGQRADNFTYPFVL 168
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+AC L +E G ++H + G S + + NSL+AMY+K G +G A VF M E+D+
Sbjct: 169 KACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLT 228
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW+ MISG A N A F M +AG+F D T G+LSAC+ V EG ++
Sbjct: 229 SWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEG-----KV 283
Query: 261 SKDFGILPNIHHY---------------GCVVD-------------------LLG--RAG 284
+ + +I +Y C+VD +LG R G
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 285 LLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV- 340
++ +L M G PD + +LGAC + G + +L++ K ++ V
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVK-KGFDANTIVG 402
Query: 341 -LLLNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKGVVHEFVVDDVSHPRINEI 398
L+++YS G + + + M +K L + + + GL H R E
Sbjct: 403 TALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGL-------------HGRGREA 449
Query: 399 YQMLD--EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEK 440
+LD + N + G I S + G +G + Y EK
Sbjct: 450 ISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEK 493
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 298/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + PE+ +FEKM ++ I A+ C L G +H V +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D +M +L+ +YS ++ A +F+ + R V+WN +I Y +N R +AL F
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFS 439
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KPD T + V+ A A L + IH I + + +L+ MYSK
Sbjct: 440 EM--KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSK 497
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ MA ++F + ++ V++W+AMI G +G GR A++ F M++ V P+D T+ V
Sbjct: 498 CGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSV 557
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SACSH GLVDEG+ M +D+G+ P++ HYG +VDLLGRAG + +A+ I +M + P
Sbjct: 558 ISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISP 617
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
T++ GAC+IHK++ +GE+ + L EL E G +VLL N+Y+S W KV E+R+
Sbjct: 618 GITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRK 677
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL+ TPGCS + L+ VH F +HP+ IY L+E+ ++K AGYV + T+
Sbjct: 678 TMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPD-TN 736
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ + + L+ HSEKLAIAFG+L T PGTTI V KNLR+C DCHN K +S V
Sbjct: 737 LILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTG 796
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 797 REIIVRDMQRFHHFKNGICSCGDYW 821
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 192/404 (47%), Gaps = 38/404 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ +SS E +MR + + ++ +K C L G +IH +++ +
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + MT ++++Y+ + +A K+FD +P+RD V+WN +I+ + +N + AL L
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELV- 236
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L ++ G +PD +T + VL A A +G L G+ IH Y G+ +N+ +L MYSK
Sbjct: 237 -LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSK 295
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F GM +K VVSW++M+ G NG AI F M G+ P T
Sbjct: 296 CGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
Query: 241 LSACSHCGLVDEGMM---FLDRM-------------------------SKDFGILPNIHH 272
L AC+ G ++ G F+D++ S F L H
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 273 YGCVVDLLGRA--GLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+LG A G + +A + + S+G+KPDS +++ A VT + I
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALA-ELSVTRHAKWIHG 474
Query: 328 LIELKAQESGDYVL--LLNLYSSVGDWEKVKELREFMNEKGLQT 369
LI + +V L+++YS G ++L + ++++ + T
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT 518
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+EH + +K L++++SK GS+ A VF+ + +K + M+ G A N A+
Sbjct: 79 NEHLFQTK------LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
M+ V P FT +L C + G ++ + N+ VV++
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN-SFAANVFAMTGVVNM 191
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ +D AY++ M + D W T++
Sbjct: 192 YAKCRQIDDAYKMFDRMPER-DLVSWNTIIA 221
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/526 (38%), Positives = 307/526 (58%), Gaps = 21/526 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ S E+ LF +M + +N S + ++ + IH V++
Sbjct: 289 MIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR 348
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + L L+D+YS + ++FD + RD V+WN +I+ Y+ R+ DAL L
Sbjct: 349 GLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLL 408
Query: 120 DNLNREESGC--------------KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ R E KP+ +T + VL CA L AL G++IH Y +
Sbjct: 409 HEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLA 468
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S++ + ++L+ MY+KCG L +A VF MP ++V++W+ +I M+G G++++E F M
Sbjct: 469 SQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDM 528
Query: 226 QRAG-----VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
G V P + TF + ++CSH G+VDEG+ +M + GI P HY C+VDL+
Sbjct: 529 VAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLV 588
Query: 281 GRAGLLDQAYQLITSMGVKPDST-IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
GRAG +++AY L+ +M D W +LLGACRI+ ++ +GE E+L++L+ + Y
Sbjct: 589 GRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHY 648
Query: 340 VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY 399
VLL N+YSS G W+K LR M G++ PGCS I VH+F+ D+SHP+ +++
Sbjct: 649 VLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLH 708
Query: 400 QMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVA 459
L+ ++++LK GYV + LH++ EEK L HSEKLAIAFG+L TPPGTTIRVA
Sbjct: 709 DFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVA 768
Query: 460 KNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KNLR+C DCH +K +S + +RE+I+RD RFHHF++G CSC DYW
Sbjct: 769 KNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 143/312 (45%), Gaps = 13/312 (4%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM--TTLMDLYSTFEKSFEA 84
P N FA +K L G QIHA V + GY S + TL+++Y +A
Sbjct: 8 PDN-FAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDA 66
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
K+FD I +RD V+WN +IS R + A+ F + E G +P T + + AC+
Sbjct: 67 YKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLME--GFEPSSFTLVSMALACS 124
Query: 145 HL---GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
+L L G++IH G+ + N+L+AMY+K G L A + ++D+V+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
W++MIS + N +A+ M GV PD TF VL ACSH L+ G
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
+ ++ N +VD+ G ++ +L+ + +W ++ +H
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQVESG-RLVFDSVLDRKIGLWNAMIAGYAQSEH---D 299
Query: 322 ERVIEHLIELKA 333
E+ + IE++A
Sbjct: 300 EKALMLFIEMEA 311
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 45/367 (12%)
Query: 27 PTNPFACSFAIKCC--MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
P++ S A+ C K L G QIH R G+ + LM +Y+ + +A
Sbjct: 111 PSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDA 169
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
L RD V WN +IS + +N+R +AL + E G KPD VT VL AC+
Sbjct: 170 KSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLE--GVKPDGVTFASVLPACS 227
Query: 145 HLGALEFGEKIHRY------ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
HL L G++IH Y + E+ + + ++L+ MY CG + VF + ++
Sbjct: 228 HLDLLRTGKEIHAYALRTDDVIENSF-----VGSALVDMYCNCGQVESGRLVFDSVLDRK 282
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
+ W+AMI+G A + H A+ F M+ AG++ + T + ++ A C +
Sbjct: 283 IGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIH 342
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
+ K G+ N + ++D+ R G + + ++ SM + D W T+ I +
Sbjct: 343 GYVIKR-GLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR-DIVSWNTI-----ITSY 395
Query: 318 VTLGERVIEHLIELKAQESGDYVLLLNLYSSV-------GDWEKVKELREFMNEKGLQTT 370
V G S D +LLL+ + GD+ K++ N L T
Sbjct: 396 VICG-------------RSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTV 442
Query: 371 -PGCSTI 376
PGC+++
Sbjct: 443 LPGCASL 449
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS--KMNLCNSLIAMYSKCGSL 184
SG PD+ VL+A A + L G++IH ++ + GYGS + + N+L+ MY KCG L
Sbjct: 4 SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
G A++VF + E+D VSW+++IS L AI++F M G P T + AC
Sbjct: 64 GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123
Query: 245 SH 246
S+
Sbjct: 124 SN 125
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 303/493 (61%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M Q ++ N F S +K C + G Q++A V++ + + +L+
Sbjct: 233 EAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLI 292
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+YS A K FD + +++ V++N +++ Y ++ + +A LF+ + E +G +
Sbjct: 293 SMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEI--EGAGTGVN 350
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T +L + +GA+ GE+IH I + G+ S +++CN+LI+MYS+CG++ AF+VF
Sbjct: 351 AFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFN 410
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M + +V+SW++MI+G A +G A+E+F M AGV P++ T+ VLSACSH GL+ E
Sbjct: 411 EMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISE 470
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G+ M + GI+P + HY CVVDLLGR+G L++A +L+ SM K D+ + RT LGAC
Sbjct: 471 GLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGAC 530
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+H ++ LG+ E ++E + Y+LL NL++S G WE+V E+R+ M E+ L G
Sbjct: 531 RVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAG 590
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
CS I ++ VH+F V D SHP+ EIY LD++ ++K GY+ LH++ E+K
Sbjct: 591 CSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQ 650
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L HSEK+A+A+G ++T IRV KNLR+C DCH K S V +E+++RD RFH
Sbjct: 651 YLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFH 710
Query: 493 HFREGRCSCNDYW 505
HF++G CSCNDYW
Sbjct: 711 HFKDGTCSCNDYW 723
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 42/315 (13%)
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+RD V+W+ LISCY N++ +A+ F + E G P++ V +AC++ + G
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAF--FDMLECGFYPNEYCFTGVFRACSNKENISLG 61
Query: 153 EKIHRYISEHGY-GSKMNLCNSLIAMYSKC-GSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
+ I ++ + GY S + + +LI M+ K G L A++VF MP+++VV+W+ MI+
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-------------- 256
G RDA++ F M +G PD T +GV+SAC+ GL+ G F
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 257 -----------------LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLD-QAYQLITSM 296
+D K F +P N+ + ++ ++G D +A +L M
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYVLLLNLYSSVGDW 352
VKP+ + ++L AC + LGE+V +++++ A + L+++YS G+
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 353 EKVKELREFMNEKGL 367
E ++ + + EK L
Sbjct: 302 ENARKAFDVLFEKNL 316
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 8/252 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E F M + N + + + C ++ G I +L+ G
Sbjct: 13 LISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTG 72
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
Y + D + L+D++ E A K+FD +P R+ V W ++I+ + + +RDA+ L
Sbjct: 73 YFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDL 132
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L+ SG PD T V+ ACA +G L G + H + + G + + SL+ MY
Sbjct: 133 F--LDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMY 190
Query: 179 SKC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDD 234
+KC GS+ A +VF MP +V+SW+A+I+G +G R+AIE F M + V P+
Sbjct: 191 AKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNH 250
Query: 235 QTFTGVLSACSH 246
TF+ VL AC++
Sbjct: 251 FTFSSVLKACAN 262
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AY+ S + EE F LF ++ N F + + ++ G QIH+R+L+ G
Sbjct: 322 IVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSG 381
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + L+ +YS A ++F+E+ + ++W +I+ + ++ AL F
Sbjct: 382 FKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFH 441
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ E+G P++VT + VL AC+H+G + G K + + EHG +M ++ +
Sbjct: 442 KM--LEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLG 499
Query: 180 KCGSLGMAFEVFKGMPEK 197
+ G L A E+ MP K
Sbjct: 500 RSGHLEEAMELVNSMPFK 517
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 315/509 (61%), Gaps = 6/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + S + + L+ +M I + + + +K C +L G ++H+R L+ G
Sbjct: 101 LIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLG 160
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ----RDTVAWNVLISCYIRNQRTRDAL 116
+ + +M+LY + +A ++F+E+P+ +DTV W +I ++RN+ AL
Sbjct: 161 LSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRAL 220
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + E +P++ T + VL AC+ LGALE G +H Y+ + + + N+LI
Sbjct: 221 EAFRGMQGE--NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALIN 278
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MYS+CGS+ A VF M ++DV++++ MISGL+MNG R AIE F M + P + T
Sbjct: 279 MYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVT 338
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F GVL+ACSH GLVD G M++D+G+ P I HYGC+VDLLGR G L++AY LI +M
Sbjct: 339 FVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 398
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+ PD + TLL AC++HK++ LGE+V + L + +SG YVLL ++Y+S G W++
Sbjct: 399 KMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAA 458
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R M E G+Q PGCS+I + +HEF++ D+ HPR IY+ L+E+N+ L++ GY
Sbjct: 459 QVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHP 518
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
E L ++ EK AL+ HSE+LAI +G+++T P T IRV KNLR+C DCH+ K+++
Sbjct: 519 EKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIA 578
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R+V++RDR RFH+F G CSC DYW
Sbjct: 579 KITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 8/266 (3%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
L IHA+++R+G+ D ++ L+ S A ++F + + LI ++ +
Sbjct: 49 LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 108
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
DA+ L+ + + PD+ +L+AC AL G ++H + G S
Sbjct: 109 GNYFDAIQLYSRMLHD--SILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRL 166
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPE----KDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ ++ +Y KCG LG A VF+ MPE KD V W+AMI G N A+E+F M
Sbjct: 167 VRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGM 226
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q V P++ T VLSACS G ++ G M K F I N+ ++++ R G
Sbjct: 227 QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGS 285
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGA 311
+D+A + M + D + T++
Sbjct: 286 IDEAQTVFDEMKDR-DVITYNTMISG 310
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 7/181 (3%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D + +LQ H+ + IH + +G+ + L+ SKC ++ A +F
Sbjct: 31 DQKQIISLLQRSKHINQVL---PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 87
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ +V ++A+I G +G+ DAI+ + M + PD+ +L AC +
Sbjct: 88 QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALR 147
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTL 308
EG R K G+ N +++L G+ G L A ++ M V D+ W +
Sbjct: 148 EGREVHSRALK-LGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 206
Query: 309 L 309
+
Sbjct: 207 I 207
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/506 (39%), Positives = 311/506 (61%), Gaps = 7/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + + LF +MR++ + N F S + + + QIHA V++
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYS----TILTANAAVSPSQIHALVVKTN 422
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + T L D YS + EA K+F+ I ++D VAW+ ++S Y + A+ +F
Sbjct: 423 YENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFL 482
Query: 121 NLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L +E G +P++ T VL ACA ++E G++ H + G+ + + + ++L+ MY+
Sbjct: 483 QLAKE--GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYA 540
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G++ A EVFK ++D+VSW++MISG A +G G+ +++ F M+ + D TF G
Sbjct: 541 KRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIG 600
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V+SAC+H GLV+EG + D M KD+ I+P + HY C+VDL RAG+L++A LI M
Sbjct: 601 VISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFP 660
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
+TIWRTLL ACR+H +V LGE E LI L+ Q+S YVLL N+Y++ G+W++ ++R
Sbjct: 661 AGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVR 720
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M+ K ++ G S I +K F+ D+SHP+ + IY L+E++ +LK AGY +
Sbjct: 721 KLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTK 780
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E K LS HSE+LAIAFG++ATPPGT I++ KNLR+C DCH K++S +
Sbjct: 781 YVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIE 840
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD RFHHF+ G CSC DYW
Sbjct: 841 GRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 181/399 (45%), Gaps = 43/399 (10%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S + +E LF +R+ PT+ + S +K C + G Q+H + ++ G+ D
Sbjct: 67 FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T+L+D+Y E + ++FDE+ ++ V+W L++ Y +N AL LF +
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G KP+ T VL A GA+E G ++H + + G S + + NS++ MYSK +
Sbjct: 187 E--GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMV 244
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF M ++ VSW++MI+G NG +A E F M+ GV F V+ C
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304
Query: 245 S-----------HCGLVDEGMMF-----------------LDRMSKDFGIL---PNIHHY 273
+ HC ++ G F +D K F ++ N+ +
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSW 364
Query: 274 GCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
++ + G D+A L M GV+P+ + T+L A + + I L+
Sbjct: 365 TAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA-----NAAVSPSQIHALVV 419
Query: 331 LKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGL 367
E+ V L + YS +GD + ++ E ++EK +
Sbjct: 420 KTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDI 458
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 133/258 (51%), Gaps = 8/258 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + E F LF +MR + + + IK C + Q+H +V+++G
Sbjct: 265 MIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG 324
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
D + T LM YS + +A KLF + ++ V+W +IS Y++N RT A+ LF
Sbjct: 325 SDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLF 384
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ RE G +P+ T +L A A + +IH + + Y + ++ +L YS
Sbjct: 385 CQMRRE--GVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYS 438
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G A ++F+ + EKD+V+WSAM+SG A G A++ F + + GV P++ TF+
Sbjct: 439 KIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSS 498
Query: 240 VLSACSH-CGLVDEGMMF 256
VL+AC+ V++G F
Sbjct: 499 VLNACAAPTASVEQGKQF 516
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+LFDE PQ+ N L+ + RN + ++AL LF L R SG D + VL+ C
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRR--SGSPTDGSSLSCVLKVCGC 104
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G+++H + G+ +++ SL+ MY K S+ VF M K+VVSW+++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
++G NG A++ F MQ G+ P+ TF VL + G V++G+ + M G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKSG 223
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ I +V++ ++ ++ A + SM + ++ W +++
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-NAVSWNSMIA 267
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/511 (38%), Positives = 304/511 (59%), Gaps = 7/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI---PTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
+V Y+ PE L+ +M+++ N F S A+ G ++H V+
Sbjct: 132 LVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVV 191
Query: 58 RDGYQL---DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
R G D+ L + L D+Y+ + +A ++FD +P RD V+W ++ Y R +
Sbjct: 192 RRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGE 251
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
LF ++ R G +P++ T VL+ACA FG ++H +++ G G ++L
Sbjct: 252 GFRLFLHMLRTR-GVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESAL 310
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ MYSKCG +G A VF+ M + D+VSW+A+ISG A NG +A+ F R+G+ PD
Sbjct: 311 LRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDH 370
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF GVLSAC+H GLVD+G+ + + + I HY CV+DLL R+G ++A ++I
Sbjct: 371 VTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIG 430
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+M VKP+ +W +LLG CRIHK+V L R E L E++ + YV L N+Y+SVG +++
Sbjct: 431 NMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDE 490
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V+++R M KG+ P S I + VH F+V D SHP+ +EIY +L ++ ++ GY
Sbjct: 491 VEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGY 550
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
VA+I LH++ E+K + YHSE+LA+AFG++ATP G+ I+V KNLRIC DCH K+
Sbjct: 551 VADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKL 610
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + R++I+RD RFHHF++G CSC DYW
Sbjct: 611 ISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 150/360 (41%), Gaps = 54/360 (15%)
Query: 50 LQIHARVLRDGYQLDSQLMT-------TLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNV 101
L H L D L S + TL+ S + + + LFD +PQRD AW+
Sbjct: 72 LSSHPATLPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSA 131
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPD-DVTCLLVLQACAHLGALEFGEKIHRYIS 160
L+S Y R+ + AL L+ + E D + T L A A G ++H ++
Sbjct: 132 LVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVV 191
Query: 161 EHGY---GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
G G L ++L MY+KCG + A VF MP +D VSW+AM+ G G +
Sbjct: 192 RRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGE 251
Query: 218 AIESFGAMQRA-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-------------- 262
F M R GV P++ T+ GVL AC+ + G RM+K
Sbjct: 252 GFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALL 311
Query: 263 -------DFG---------ILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDST 303
D G P++ + V+ + G ++A + + G+KPD
Sbjct: 312 RMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHV 371
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQ-----ESGDYVLLLNLYSSVGDWEKVKEL 358
+ +L AC H L ++ +E +K Q + Y +++L S G +E+ +++
Sbjct: 372 TFVGVLSAC---AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKM 428
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/511 (38%), Positives = 306/511 (59%), Gaps = 7/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCS--LMGGLQI---HAR 55
M++A +++ EE M + +P + ++ + +K C+ + L ++ HA
Sbjct: 321 MLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAH 380
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
+R GY L + + TTL+D Y+ A ++F +P R+ V+W+ +I CY +N+R DA
Sbjct: 381 AIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDA 440
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ +F + ++ P+ +T + VL ACA + AL G+ +H YI G+ +++ N+L+
Sbjct: 441 IQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALM 500
Query: 176 AMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
AMY KCG L +F + ++VVSW+++ISG M+G GR++++ F M G+ P+
Sbjct: 501 AMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNI 560
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF VL ACSH GLV++G + M ++ + P HY C+VDLLGRAG LD+A +LI
Sbjct: 561 ITFVSVLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQ 619
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
SM ++P +W +LLGACRIH HV E HL +L+ + +G+YVLL ++Y+ +
Sbjct: 620 SMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQ 679
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V L+E + E L+ PGCS I +K ++ FV D +P++ E+ ++ E Q+K GY
Sbjct: 680 VDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGY 739
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
V + S L+++ EEK L HSEKLA+AFG++ T G IR+ KNLR+C DCH+ K
Sbjct: 740 VPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKF 799
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S +RE+++RD RFHHFR G CSC DYW
Sbjct: 800 ISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P T +L A A +HR + ++ + S L LI Y+ +L A +
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQ 305
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC----- 244
VF P K++ W+AM+ LA+ HG +A+ M R GV D ++ L AC
Sbjct: 306 VFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASA 365
Query: 245 SH---CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SH V E M + + +G+ + H ++D + G++ A ++ TSM PD
Sbjct: 366 SHLPASARVRE--MHAHAIRRGYGL--HTHVATTLIDCYAKLGIVSYAERVFTSM---PD 418
Query: 302 STI--WRTLLG 310
+ W ++G
Sbjct: 419 RNLVSWSAMIG 429
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 304/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S+ E LF +MR+ + N F + ++ C +L G Q+H VL+ G
Sbjct: 214 MISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVG 273
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LMD+Y+ + + KLF E+P R+ V WN +I Y+++ AL L+
Sbjct: 274 LDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYK 333
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ E + +VT VL+ACA L A+E G +IH + Y + + N+LI MY+K
Sbjct: 334 NM--LECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAK 391
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF + E+D +SW+AMISG +M+G +A+++F MQ P+ TF +
Sbjct: 392 CGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSI 451
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS+ GL+D G + M +D+GI P + HY C+V LLGR+G LD+A +LI + ++P
Sbjct: 452 LSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEP 511
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR LLGAC IH V LG + ++++ Q+ +VLL N+Y+ W V +R+
Sbjct: 512 NVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRK 571
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
FM KG++ PG S I +G+VH F V D SHP + I ML+ +N + + AGYV ++ +
Sbjct: 572 FMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNA 631
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK L HSE+LA+AFG++ TP IR+ KNLRIC DCH+ K++S +
Sbjct: 632 VLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQ 691
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++IIRD RFHHF++G CSC DYW
Sbjct: 692 RDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y S +E LF ++ ++ NPF + +K + +HA + + G
Sbjct: 12 LIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLG 71
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ ++ + T L+D Y+ A + FD I +D V+W +++CY N R +D+L LF
Sbjct: 72 HESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFA 131
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G P+ T VL+AC L A G+ +H + + Y + + L+ +Y+K
Sbjct: 132 EMRM--VGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTK 189
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G VF+ MP+ DV+ WS MIS A + R+A+E FG M+RA V P+ TF V
Sbjct: 190 FGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASV 249
Query: 241 LSACS-----------HCGLVDEGM---MF--------------LDRMSKDFGILPNIHH 272
L +C+ HC ++ G+ +F LD K F LPN +
Sbjct: 250 LQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNE 309
Query: 273 YGCVVDLLG--RAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
++G ++G D+A L +M V+ + ++L AC + LG ++ H
Sbjct: 310 VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQI--H 367
Query: 328 LIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
+ LK D V+ L+++Y+ G + + + + ++E+
Sbjct: 368 SLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSER 408
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 24/203 (11%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+P R+TV++ LI Y+++ + + + LF ++RE P T +L L L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
+ +H I + G+ S + +LI Y+ CGS+ A + F + KD+VSW+ M++ A
Sbjct: 61 YS--LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
N +D+++ F M+ G P+ TF GVL AC GL + F + ++
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKAC--IGL------------EAFSVGKSV 164
Query: 271 HHYGCVV------DLLGRAGLLD 287
H GCV+ DL GLLD
Sbjct: 165 H--GCVLKTCYEMDLYVGVGLLD 185
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + E ++ + + F + C + L G + ++G
Sbjct: 190 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEG 249
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T +DLY + +A ++FD++ +D VAW ++ Y N R+AL LF
Sbjct: 250 IAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF- 308
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + G +PD L AC LGAL+ G + R + + L +LI MY+K
Sbjct: 309 -LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 367
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A+ VF+ M +KD++ W+AMI GL M GH + A G M+++GV +D TF G+
Sbjct: 368 CGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGL 427
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +C+H GL+ +G + M+K + I P I HYGC+VDLL RAGLL +A+QLI M +
Sbjct: 428 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA 487
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ I LLG C+IH++ L E V+ LI L+ SG+YV+L N+YS+ G WE +LR
Sbjct: 488 NAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 547
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ P CS + +G VHEF V D SHP ++IY+ LDE+ ++K GY
Sbjct: 548 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 607
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ EEK + L +HSEKLAIAF +L T PG TIRV KNLR+C DCH K++S + +
Sbjct: 608 VMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITH 667
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G CSCNDYW
Sbjct: 668 REIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 144/284 (50%), Gaps = 7/284 (2%)
Query: 29 NPFACSF--AIKCCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
NP +F A+K + L G Q+HAR L+ + ++T+L+ LY+ A
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++FDE+P TV+W LI+ Y+ R+A+ + N +G +PD T + VL ACA
Sbjct: 174 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAF--ANGMRPDSFTAVRVLTACAR 231
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ L GE + R + G + + + + +Y KCG + A EVF M +KD V+W AM
Sbjct: 232 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 291
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
+ G A NGH R+A++ F AMQ GV PD G LSAC+ G +D G + RM
Sbjct: 292 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAI-RMVDWDE 350
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
L N ++D+ + G +A+ + M K D +W ++
Sbjct: 351 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 393
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + E ++ + + F + C + L G + ++G
Sbjct: 143 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEG 202
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T +DLY + +A ++FD++ +D VAW ++ Y N R+AL LF
Sbjct: 203 IAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF- 261
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + G +PD L AC LGAL+ G + R + + L +LI MY+K
Sbjct: 262 -LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 320
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A+ VF+ M +KD++ W+AMI GL M GH + A G M+++GV +D TF G+
Sbjct: 321 CGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGL 380
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +C+H GL+ +G + M+K + I P I HYGC+VDLL RAGLL +A+QLI M +
Sbjct: 381 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA 440
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ I LLG C+IH++ L E V+ LI L+ SG+YV+L N+YS+ G WE +LR
Sbjct: 441 NAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 500
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ P CS + +G VHEF V D SHP ++IY+ LDE+ ++K GY
Sbjct: 501 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 560
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ EEK + L +HSEKLAIAF +L T PG TIRV KNLR+C DCH K++S + +
Sbjct: 561 VMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITH 620
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G CSCNDYW
Sbjct: 621 REIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 144/284 (50%), Gaps = 7/284 (2%)
Query: 29 NPFACSF--AIKCCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
NP +F A+K + L G Q+HAR L+ + ++T+L+ LY+ A
Sbjct: 67 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++FDE+P TV+W LI+ Y+ R+A+ + N +G +PD T + VL ACA
Sbjct: 127 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAF--ANGMRPDSFTAVRVLTACAR 184
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ L GE + R + G + + + + +Y KCG + A EVF M +KD V+W AM
Sbjct: 185 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 244
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
+ G A NGH R+A++ F AMQ GV PD G LSAC+ G +D G + RM
Sbjct: 245 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAI-RMVDWDE 303
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
L N ++D+ + G +A+ + M K D +W ++
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 346
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 300/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + ++ F +M + I ++ + A+ C +L G QIHA+ G
Sbjct: 545 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 604
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L+ LYS EA F++ D +AWN L+S + ++ +AL +F
Sbjct: 605 FSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFA 664
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+NRE G ++ T ++A + ++ G+++H I++ GY S+ +CN++I+MY+K
Sbjct: 665 RMNRE--GIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAK 722
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A + F + K+ VSW+AMI+ + +G G +A++SF M + V P+ T GV
Sbjct: 723 CGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGV 782
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVD+G+ + + M+ ++G+ P HY CVVD+L RAGLL +A I M ++P
Sbjct: 783 LSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEP 842
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ +WRTLL AC +HK++ +GE HL+EL+ ++S YVLL NLY+ W+ R+
Sbjct: 843 DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQ 902
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKG++ PG S I +K +H F V D +HP +EI++ ++ K+ GYV + S
Sbjct: 903 KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFS 962
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L L E+K + HSEKLAI+FG+L+ P I V KNLR+C DCH++ K +S V N
Sbjct: 963 LLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSN 1022
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 1023 REIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 179/387 (46%), Gaps = 41/387 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
M++ + S + F LF +M + + N S ++ C + QIHAR++
Sbjct: 140 MIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQ 199
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + L+DLYS A ++FD + +D +W +IS +N+ +A+ LF
Sbjct: 200 GLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLF 259
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ G P VL AC + +LE GE++H + + G+ S +CN+L+++Y
Sbjct: 260 CDMYV--LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 317
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
GSL A +F M ++D V+++ +I+GL+ G+G A+E F MQ G+ PD T
Sbjct: 318 HLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLAS 377
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA---------------- 283
++ ACS G + G L + G N G +++L +
Sbjct: 378 LVVACSSDGTLFSGQQ-LHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVE 436
Query: 284 ------------GLLD---QAYQLITSMGVK---PDSTIWRTLLGACRIHKHVTLGERVI 325
GLLD ++++ M ++ P+ + ++L C + LGE++
Sbjct: 437 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 496
Query: 326 EHLIELKAQESGDYV--LLLNLYSSVG 350
+I+ Q + YV +L+++Y+ +G
Sbjct: 497 SQIIKTSFQLNA-YVCSVLIDMYAKLG 522
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 178/391 (45%), Gaps = 46/391 (11%)
Query: 4 AYSMSSSPEEGFYL--FEKMRQKRIPTNPFACSFAIKCCMKFC-SLMGGLQIHARVLRDG 60
A S+S S +E F + + I N + ++ C+K SL G ++H+++L+ G
Sbjct: 39 AISVSISEDESFQENGIDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG 98
Query: 61 YQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ ++ L L+D Y F+ + A K+FDE+P+R WN +I + CLF
Sbjct: 99 FDNNACLSEKLLDFY-LFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLF 157
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFG--EKIHRYISEHGYGSKMNLCNSLIAM 177
+ E P++ T VL+AC G++ F E+IH I G G +CN LI +
Sbjct: 158 GRMVNE--NVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDL 214
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YS+ G + A VF G+ KD SW AMISGL+ N +AI F M G+ P F
Sbjct: 215 YSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAF 274
Query: 238 TGVLSACSHCGLVD-----EGMMFLDRMSKD-------------FGILPNIHH------- 272
+ VLSAC ++ G++ S D G L + H
Sbjct: 275 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQ 334
Query: 273 -----YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV 324
Y +++ L + G ++A +L M G++PDS +L+ AC + G+++
Sbjct: 335 RDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL 394
Query: 325 IEHLIELKAQESGDYV--LLLNLYSSVGDWE 353
+ +L S D + LLNLY+ D E
Sbjct: 395 HAYTTKL-GFASNDKIEGALLNLYAKCSDIE 424
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 4/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ S E+ LF++M+ + + + + C +L G Q+HA + G
Sbjct: 343 LINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLG 402
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ L++LY+ A F E + V WNV++ Y R++ +F
Sbjct: 403 FASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 462
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ EE P+ T +L+ C LG LE GE+IH I + + +C+ LI MY+K
Sbjct: 463 QMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAK 520
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A+++ KDVVSW+ MI+G A+ +F M G+ D+ T
Sbjct: 521 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 580
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC+ + EG + G ++ +V L + G +++AY L
Sbjct: 581 VSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSKCGNIEEAY-LAFEQTEAG 638
Query: 301 DSTIWRTLL 309
D+ W L+
Sbjct: 639 DNIAWNALV 647
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/493 (37%), Positives = 295/493 (59%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E L +M + + F S + + + G+++H R+G+ D + ++L+
Sbjct: 156 EALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLI 215
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ ++ + K+FD +P RD + WN +++ +N +AL LF + SG KP
Sbjct: 216 DMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRM--LHSGIKPM 273
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
VT ++ AC +L +L G+++H Y+ G+ + + +SLI MY KCG++ +A +F
Sbjct: 274 PVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFD 333
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+ D+VSW+AMI G A++G R+A+ F M+ + P+ TF VL+ACSH GLVD+
Sbjct: 334 RIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDK 393
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + + MS +GI+P++ H+ + D LGR G L++AY I+ M +KP +++W TLL AC
Sbjct: 394 GWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRAC 453
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
++HK+ L E V + + +L+ + G +++L N YSS G W + LR+ M +KG+Q P
Sbjct: 454 KVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPA 513
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
CS I +K H FV D SHP I L+ ++Q+ GYV ++ E+K +
Sbjct: 514 CSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNS 573
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L HSEKLAI FG+++TPPGTTIRV KNLR+CVDCH K +S + RE+++RD RFH
Sbjct: 574 VLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFH 633
Query: 493 HFREGRCSCNDYW 505
HF++G CSC D+W
Sbjct: 634 HFKDGICSCGDFW 646
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 22/317 (6%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARVLRDGYQLDSQLMTTLM 72
LF +MR + ++ +K C+ +G G +HA LR G D L+
Sbjct: 41 LFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALL 100
Query: 73 DLYSTFEKS-------------FEAC-KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+LY E+ K+FDE+P++D V+WN L+ + R +AL L
Sbjct: 101 NLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGL 160
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ R+ GCKPD T VL A + G ++H + + +G+ + + +SLI MY
Sbjct: 161 VREMWRD--GCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMY 218
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ C + +VF +P +D + W++M++G A NG +A+ F M +G+ P TF+
Sbjct: 219 ANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFS 278
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
++ AC + + G + + G N+ ++D+ + G + A ++ +
Sbjct: 279 SLIPACGNLASLLLGKQLHAYVIRG-GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQ- 336
Query: 299 KPDSTIWRTLLGACRIH 315
PD W ++ +H
Sbjct: 337 SPDIVSWTAMIMGHALH 353
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + S +E LF +M I P S I C SL+ G Q+HA V+R G
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + ++L+D+Y A ++FD I D V+W +I + + R+AL LFD
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFD 364
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ E KP+ +T L VL AC+H G ++ G K +S+H G + +L
Sbjct: 365 RM--ELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLG 422
Query: 180 KCGSLGMAFEVFKGMPEKDVVS-WSAMI 206
+ G L A+ GM K S WS ++
Sbjct: 423 RPGKLEEAYNFISGMKIKPTASVWSTLL 450
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 115 ALCLFDNLNREESGCKPDDVTCLL--VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
A+ LF + + V L L++CA LG G +H G + N
Sbjct: 38 AIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAAN 97
Query: 173 SLIAMYSKCGS--------------LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+L+ +Y K + L +VF MPEKDVVSW+ ++ G A +G +A
Sbjct: 98 ALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEA 157
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ M R G PD T + VL + V GM +++ G ++ ++D
Sbjct: 158 LGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRN-GFHDDVFVGSSLID 216
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ D + ++ ++ V+ D+ +W ++L C
Sbjct: 217 MYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGC 249
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 309/510 (60%), Gaps = 12/510 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + + P + L+ MR + + F + + C + SL G +IH +LR+G
Sbjct: 473 LIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG 532
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++LD + +L+ LY K A FD + +++ V WN +I+ + +N+ DAL +F
Sbjct: 533 FELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFH 592
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-----RYISEHGYGSKMNLCNSLI 175
+ S PD+++ + L AC+ + AL G+++H +++EH + + SLI
Sbjct: 593 QM--LSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSF-----VTCSLI 645
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCG + + +F + K V+W+ +I+G ++GHGR AIE F +MQ AG PD
Sbjct: 646 DMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSV 705
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF +L+AC+H GLV EG+ +L +M FGI P + HY CVVD+LGRAG L++A +L+
Sbjct: 706 TFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNE 765
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ KPDS IW +LL +CR ++ + +GE+V L+EL ++ +YVL+ N Y+ +G W++V
Sbjct: 766 LPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEV 825
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+++R+ M E GLQ GCS I + G V F+V D S + +I Q E+ K++ GY
Sbjct: 826 RKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYK 885
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + LH L +EK L HSEKLAI+FG+L T GTT+RV KNLRICVDCHN K++
Sbjct: 886 PDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLV 945
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + RE+I+RD RFHHF+ G CSC DYW
Sbjct: 946 SKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 142/278 (51%), Gaps = 7/278 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARV-LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
++ C ++ ++ G +IH + +Q D L+T L+ +YS + +++C +F+ +++
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
WN L+S Y+RN RDA+ +F + + PD+ T V++AC + + GE +
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEM-ISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + S + + N+LIAMY K G + A +VF MP++++VSW++++ NG
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 216 RDAIESFGAMQRA--GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
++ F + G+ PD T V+ C+ G V GM+F ++ G+ +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF-HGLALKLGLCGELKVN 337
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++D+ + G L +A L + + + W +++G
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 3/211 (1%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
I C + + G+ H L+ G + ++ ++L+D+YS EA LFD +++
Sbjct: 305 VIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKN 363
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
++WN +I Y +++ R A L + E+ K ++VT L VL C ++I
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDK-VKVNEVTLLNVLPVCEEEIQFLKLKEI 422
Query: 156 HRYISEHGY-GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
H Y HG+ S + N+ +A Y+KCGSL A VF GM K V SW+A+I G NG
Sbjct: 423 HGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGF 482
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
R A++ + M+ +G+ PD T +LSAC+
Sbjct: 483 PRKALDLYLLMRGSGLEPDLFTIASLLSACA 513
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++ Y +S + ++F +M + +P N F IK C+ + G +H L+
Sbjct: 166 LLSGYLRNSLFRDAVFVFVEMISLTEFVPDN-FTLPCVIKACVGVYDVRLGEAVHGFALK 224
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D + L+ +Y F A K+FD++PQR+ V+WN ++ + N ++ L
Sbjct: 225 TKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGL 284
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L + G PD T + V+ CA G + G H + G ++ + +SL+ MY
Sbjct: 285 FKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMY 344
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTF 237
SKCG L A +F EK+V+SW++MI G + + R A E MQ V ++ T
Sbjct: 345 SKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTL 403
Query: 238 TGVLSAC 244
VL C
Sbjct: 404 LNVLPVC 410
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 69/320 (21%)
Query: 92 PQRDTVAWNVLISCYIRNQRTRD---ALCLFDNLNR-------------EESGCKPDDVT 135
P + + ++ +IS + + Q LC NLN+ S KP +
Sbjct: 37 PPKSSHLFSPIISSHKKQQNASKHFHNLCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQLI 96
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHG-YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
LL LQ C +E G KIH +IS + + + L L+ MYS C S + VF
Sbjct: 97 GLL-LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSAC--------- 244
K++ W+A++SG N RDA+ F M F PD+ T V+ AC
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 245 --------------------------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
G V+ + D+M + + N Y C+ +
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 279 LLGRAGLLDQAYQLITSM-----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
G+ +++Y L + G+ PD T++ C V LG ++ H + LK
Sbjct: 276 -----GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG--MVFHGLALKL 328
Query: 334 QESGDYVL---LLNLYSSVG 350
G+ + LL++YS G
Sbjct: 329 GLCGELKVNSSLLDMYSKCG 348
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/494 (41%), Positives = 301/494 (60%), Gaps = 3/494 (0%)
Query: 13 EGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E F LF+ M + + + + + A++ C L G Q+HA + + G D +L
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ EA FDEI +DT+++ L+S ++N + +A +F + + +P
Sbjct: 349 LSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM--QACNMEP 406
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T + ++ AC+HL AL+ G+ H + G + ++CNSLI MY+KCG + ++ +VF
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP +DVVSW+ MI+G ++G G++A F M+ G PDD TF +++ACSH GLV
Sbjct: 467 DKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVT 526
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + D M+ +GILP + HY C+VDLL R GLLD+AYQ I SM +K D +W LLGA
Sbjct: 527 EGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIHK++ LG++V + +L + +G++VLL N++S+ G +++ E+R KG + +P
Sbjct: 587 CRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 646
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S I + G +H FV D SHP +IY LD I +K GY A+ + L +L EEK
Sbjct: 647 GYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKE 706
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
AL YHSEKLAIAFGVL+ TI V KNLR+C DCH K ++ V NR +I+RD RF
Sbjct: 707 KALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRF 766
Query: 492 HHFREGRCSCNDYW 505
HHF+ G+CSC ++W
Sbjct: 767 HHFKNGQCSCGNFW 780
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 7/316 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAYS L+ M + R+ N + F +K C L G IHA G
Sbjct: 71 LIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + T L+DLY + A +F ++P RD VAWN +++ Y + A+
Sbjct: 131 LHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 190
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE---HGYGSKMNLCNSLIAM 177
++ ++ G +P+ T + +L A GAL G IH Y ++ + +L+ M
Sbjct: 191 DM-QDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQT 236
Y+KC L A VF GMP ++ V+WSA+I G + +A F M G+ F +
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L C+ + G ++K GI ++ ++ + +AGL+++A +
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKS-GIHADLTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 297 GVKPDSTIWRTLLGAC 312
VK D+ + LL C
Sbjct: 369 AVK-DTISYGALLSGC 383
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD IP D A+N LI Y A+ L+ ++ R P+ T VL+AC
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR--VAPNKYTFPFVLKAC 110
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ L L G IH + + G + + + +LI +Y +C G A VF MP +DVV+W+
Sbjct: 111 SALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWN 170
Query: 204 AMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEG 253
AM++G A +G AI MQ G+ P+ T +L + G + +G
Sbjct: 171 AMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/496 (40%), Positives = 303/496 (61%), Gaps = 4/496 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S+SSSP + +M + + F SFA+K C + + L++H V+R
Sbjct: 77 LIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLIPKCLELHGSVIRS 136
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ D+ + T L+ YS A K+FDE+P RD V+WN +ISC+ A ++
Sbjct: 137 GFLADAIVSTNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCFSHAGLHHQAFSMY 196
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G D T + +L +CAH+ AL G +HR + S + +CN+LI MY+
Sbjct: 197 SRMANE--GVCVDAYTIVALLSSCAHVSALNMGVMLHRIACDIRCESSVFVCNALIDMYA 254
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGSL A VFKGM ++DV++W++MI G ++GHG +AI F M +GV P+ TF G
Sbjct: 255 KCGSLENAVGVFKGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAVTFLG 314
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L CSH GLV EG+ + MS F + PN+ HYGC+VDL GRAG L++A ++I +
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLEKALEMIHTSSCH 374
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +WRTLLG+C+IH+++ LGE ++ L++L+A +GDYVL+ ++YS+ D + +R
Sbjct: 375 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQGFASMR 434
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ + L+T PG S I + VH+FV+DD HP IY L E+ + +AGY E +
Sbjct: 435 KLIRSHDLRTIPGWSWIEIGDQVHKFVIDDKMHPESALIYSELGEVINRAILAGYKPEDS 494
Query: 420 SEL-HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ H L +A + HSEKLAIA+G++ T GTT+R+ KNLR+C DCH+F K +S
Sbjct: 495 NRTAHTLSDRCLESADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKA 554
Query: 479 YNREVIIRDRLRFHHF 494
+NRE+I+RDR+RFH F
Sbjct: 555 FNREIIVRDRVRFHQF 570
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/494 (41%), Positives = 301/494 (60%), Gaps = 3/494 (0%)
Query: 13 EGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E F LF+ M + + + + + A++ C L G Q+HA + + G D +L
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ EA FDEI +DT+++ L+S ++N + +A +F + + +P
Sbjct: 349 LSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM--QACNMEP 406
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T + ++ AC+HL AL+ G+ H + G + ++CNSLI MY+KCG + ++ +VF
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVF 466
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP +DVVSW+ MI+G ++G G++A F M+ G PDD TF +++ACSH GLV
Sbjct: 467 DKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVT 526
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + D M+ +GILP + HY C+VDLL R GLLD+AYQ I SM +K D +W LLGA
Sbjct: 527 EGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIHK++ LG++V + +L + +G++VLL N++S+ G +++ E+R KG + +P
Sbjct: 587 CRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 646
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S I + G +H FV D SHP +IY LD I +K GY A+ + L +L EEK
Sbjct: 647 GYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKE 706
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
AL YHSEKLAIAFGVL+ TI V KNLR+C DCH K ++ V NR +I+RD RF
Sbjct: 707 KALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRF 766
Query: 492 HHFREGRCSCNDYW 505
HHF+ G+CSC ++W
Sbjct: 767 HHFKNGQCSCGNFW 780
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 7/316 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAYS L+ M + R+ N + F +K C L G IHA G
Sbjct: 71 LIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + T L+DLY + A +F ++P RD VAWN +++ Y + A+
Sbjct: 131 LHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 190
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE---HGYGSKMNLCNSLIAM 177
++ ++ G +P+ T + +L A GAL G IH Y ++ + +L+ M
Sbjct: 191 DM-QDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQT 236
Y+KC L A VF GMP ++ V+WSA+I G + +A F M G+ F +
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L C+ + G ++K GI ++ ++ + +AGL+++A +
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKS-GIHADLTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 297 GVKPDSTIWRTLLGAC 312
VK D+ + LL C
Sbjct: 369 AVK-DTISYGALLSGC 383
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD IP D A+N LI Y A+ L+ ++ R P+ T VL+AC
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR--VAPNKYTFPFVLKAC 110
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ L L G IH + + G + + + +LI +Y +C G A VF MP +DVV+W+
Sbjct: 111 SALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWN 170
Query: 204 AMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEG 253
AM++G A +G AI MQ G+ P+ T +L + G + +G
Sbjct: 171 AMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 276/422 (65%), Gaps = 2/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++F+E+P RD V+W+ L+ Y++ AL +F ++ E G + ++ + L A
Sbjct: 216 AREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDM--VEKGVRVNEAAVVTALSAA 273
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A +G LE G +H + G +N+ +L+ M+SKCG + +A EVF GMP +DV +W+
Sbjct: 274 AQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWN 333
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI GLA +G G+DA+E F G++P D TF GVL+ACS CGLV EG + M
Sbjct: 334 AMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDK 393
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ I P + HYGC+VDLLGRAGL+ +A +LI M + PD +W T+L AC+ H V LG
Sbjct: 394 YRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGIT 453
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
V LIEL+ G YVLL ++Y+ W++V+E+R+ M+ +G + G S + +G +H
Sbjct: 454 VGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEAQGNLH 513
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
+F+V D+ H +IY MLD IN++L AGYV +++S LH++G EEK +A+ HSE+LAI
Sbjct: 514 KFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAI 573
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+G + T G+ IR+ KNL++C DCH F+K+++ V+NRE+I+RD RFHH +EG+CSC D
Sbjct: 574 AYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRDGSRFHHMKEGKCSCLD 633
Query: 504 YW 505
YW
Sbjct: 634 YW 635
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y + +F M +K + N A A+ + L G +H V R G
Sbjct: 234 LVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTG 293
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D++S A ++FD +P+RD AWN +I + +DA+ LF
Sbjct: 294 MPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFW 353
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYS 179
E G P D+T + VL AC+ G + G + + + ++ +M ++ +
Sbjct: 354 RFLDE--GLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLG 411
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + A E+ +GM D V W ++S
Sbjct: 412 RAGLVSEAIELIEGMHIAPDPVLWGTVLSA 441
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N+++A Y + G + A EVF+ MP +D VSWS ++ G G A+ F M GV
Sbjct: 201 NAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVR 260
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
++ LSA + GL++ G F+ + + G+ +++ +VD+ + G + A +
Sbjct: 261 VNEAAVVTALSAAAQMGLLEHG-RFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVARE 319
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ M + D W ++ C + H LG+ +E
Sbjct: 320 VFDGMP-RRDVFAWNAMI--CGLASH-GLGQDAVE 350
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/505 (40%), Positives = 299/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y+ S E LF ++ ++ +P N F + ++ C L G QIH V++ G
Sbjct: 110 LIQGYAESVRFLEAIELFVRLHREVLP-NQFTFASVLQACATMEGLNLGNQIHCHVIKIG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LMD+Y+ + + +LF E P R+ V WN +I +++ AL LF
Sbjct: 169 LHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLF- 227
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
LN E + +VT L+ACA L ALE G +IH + + + + N+LI MY+K
Sbjct: 228 -LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAK 286
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M ++D VSW+AMISG +M+G GR+A+ F MQ V PD TF GV
Sbjct: 287 CGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGV 346
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC++ GL+D+G + M +D GI P I HY C+V LLGR G LD+A +LI + +P
Sbjct: 347 LSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQP 406
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WR LLGAC IH + LG + ++E++ Q+ +VLL N+Y++ W+ V +R+
Sbjct: 407 SVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRK 466
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG++ PG S I +G VH F V D SHP + I ML+ ++ + K AGY+
Sbjct: 467 NMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNV 526
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK L HSE+LA++FG++ TP G+ IR+ KNLRICVDCH K +S V
Sbjct: 527 VLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQ 586
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+EG CSC DYW
Sbjct: 587 REIVVRDINRFHHFQEGLCSCGDYW 611
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/486 (43%), Positives = 287/486 (59%), Gaps = 19/486 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + +Q+HA VLR G D +L+TTL+D Y+ A K+F
Sbjct: 110 DALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVF 169
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------NREESGCKPDDVTCLLVL 140
DE+ RD WN L++ + AL LF L +REE P++VT + L
Sbjct: 170 DEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREE----PNEVTIVAAL 225
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD-- 198
ACA +G L+ G +H + G + +CNSLI MYSKCGSL A +VF + +D
Sbjct: 226 SACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQT 285
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+VS++A I +M+GHG DA+ F M + PD T+ VL C+H GLVD+G+ +
Sbjct: 286 LVSYNAAIQAHSMHGHGGDALRLFDEMP-TRIEPDGVTYLAVLCGCNHSGLVDDGLRVFN 344
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M + PN+ HYG +VDLLGRAG L +AY + SM D +W+TLLGA ++H V
Sbjct: 345 SMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVV 400
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L E L EL + GDYVLL N+Y+S W V +R+ M ++ PG S +
Sbjct: 401 ELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEI 460
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
GV+H+F+ D HPR EIY+ L++I ++ GY E ++ LH++G EEK AL YHS
Sbjct: 461 DGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHS 520
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG++ATPPG T+RV KNLRIC DCH AK++S Y R ++IRDR RFH F +G+
Sbjct: 521 EKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQ 580
Query: 499 CSCNDY 504
CSC DY
Sbjct: 581 CSCRDY 586
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD ++ L+A A ++H + G + + L +L+ Y+KCG L A +
Sbjct: 108 RPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARK 167
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF--------PDDQTFTGVL 241
VF M +DV +W+++++GLA A+ F + A F P++ T L
Sbjct: 168 VFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRL--ANSFQELPSREEPNEVTIVAAL 225
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SAC+ GL+ +G M++ +K FG+ N+ ++D+ + G L +A + S +KP+
Sbjct: 226 SACAQIGLLKDG-MYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHS--IKPE 282
Query: 302 STIWRTLLGACRIH 315
+ A + H
Sbjct: 283 DQTLVSYNAAIQAH 296
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 304/544 (55%), Gaps = 41/544 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
M+ Y EE F F +M I + + + I C MG G Q+H +
Sbjct: 254 MISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYI 313
Query: 57 LRDGYQLDSQLMTT----LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
LR + + + L+ Y+ +++ EA ++FD++P RD ++WN ++S Y+ QR
Sbjct: 314 LRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRI 373
Query: 113 RDA-------------------------------LCLFDNLNREESGCKPDDVTCLLVLQ 141
+A L LF+ + E G +P D +
Sbjct: 374 EEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSE--GLEPCDYAFAGAIT 431
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
AC+ LG+L+ G++IH + G+ S ++ N+LI MYS+CG + A VF MP D VS
Sbjct: 432 ACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVS 491
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
W+AMI+ LA +GHG AIE F M + + PD TF +L+AC+H GL+ EG + D M
Sbjct: 492 WNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMC 551
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
+GI P HY ++DLL RAG+ +A +I SM + + IW LL CRIH ++ LG
Sbjct: 552 TRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELG 611
Query: 322 ERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGV 381
+ + L+EL + G Y++L N+Y+++G W++V +R M E+G++ PGCS + ++ +
Sbjct: 612 IQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENM 671
Query: 382 VHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKL 441
VH F+VDD HP + +Y L ++ ++K GYV + LH++ +E K ++LS HSEKL
Sbjct: 672 VHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKL 731
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
A+ +G++ P G TIRV KNLRIC DCHN K +S V RE+++RDR RFHHF+ G CSC
Sbjct: 732 AVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSC 791
Query: 502 NDYW 505
+YW
Sbjct: 792 GNYW 795
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 180/462 (38%), Gaps = 102/462 (22%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQ-IHARVLRD 59
M+ AYS + LF +M++ +PF S + Q +H V++
Sbjct: 110 MITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKL 169
Query: 60 GYQLDSQLMTTLMDLY-----STFEKSFE----ACKLFDEIPQRDT-------------- 96
G L + L+ Y S KS + A K+FDE P+
Sbjct: 170 GTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVR 229
Query: 97 -------------------VAWNVLISCYIRNQRTRDALCLFDNLNREES-GCKPDDVTC 136
VAWN +IS Y+R +A FD R S G + D+ T
Sbjct: 230 NDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEA---FDTFRRMHSMGIQEDEYTY 286
Query: 137 LLVLQACA----HLGALEFGEKIHRYI----SEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
++ AC +G G ++H YI E + +++ N+LI Y+K + A
Sbjct: 287 TSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEAR 346
Query: 189 EVFKGMPEKDVVSWSA-------------------------------MISGLAMNGHGRD 217
VF MP +D++SW+A MISGLA NG G +
Sbjct: 347 RVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LDRMSKDFGILPNIHHYG 274
++ F M+ G+ P D F G ++ACS G +D G + R+ D G+
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAG----N 462
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
++ + R G+++ A + +M DS W ++ A H H G + IE L E +
Sbjct: 463 ALITMYSRCGVVESAESVFLTMPYV-DSVSWNAMIAALAQHGH---GVKAIE-LFEQMMK 517
Query: 335 ES--GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ--TTPG 372
E D + L + ++ +KE R + + + TPG
Sbjct: 518 EDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPG 559
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 78/272 (28%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ------------------ 93
+HA +L G++ ++ ++ L+++Y A KLFD+IP+
Sbjct: 27 VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86
Query: 94 ---------------RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
RDTV++N +I+ Y AL LF + R G PD T
Sbjct: 87 VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKR--YGFLPDPFTFSS 144
Query: 139 VLQACAHLGALE-FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS---------LGMAF 188
VL A + + E + +H + + G ++ N+L++ Y C S + A
Sbjct: 145 VLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASAR 204
Query: 189 EVFKGMPEKDV---------------------------------VSWSAMISGLAMNGHG 215
+VF P+ + V+W+AMISG G
Sbjct: 205 KVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLY 264
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+A ++F M G+ D+ T+T ++SAC C
Sbjct: 265 EEAFDTFRRMHSMGIQEDEYTYTSLISACGSC 296
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+L++ YS G++ +A ++F P +D VS++AMI+ + G A+ F M+R G
Sbjct: 75 TTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYG 134
Query: 230 VFPDDQTFTGVLSACS------------HCGLVDEGMMFLDRMSK 262
PD TF+ VLSA S HC ++ G + + ++
Sbjct: 135 FLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTN 179
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 266/423 (62%), Gaps = 2/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A LFD +PQRD+V+W +I+ Y +N +A+ + + R+ C L A
Sbjct: 330 QARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCC--ALSA 387
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA + ALE G+++H + GY + N+L+ MY KCG + A++VF+G+ KD+VSW
Sbjct: 388 CADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSW 447
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ M++G A +G GR A+ F +M AGV PD+ T GVLSACSH GL D G + M+K
Sbjct: 448 NTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNK 507
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
D+GI PN HY C++DLLGRAG L++A LI +M +PD+ W LLGA RIH ++ LGE
Sbjct: 508 DYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGE 567
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+ E + +++ SG YVLL NLY++ G W V ++R M + G+Q TPG S + ++ +
Sbjct: 568 QAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKI 627
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
H F V D HP IY L+E++ ++K GYV+ LH++ EEK + L YHSEKLA
Sbjct: 628 HTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLA 687
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
+AFG+L P G IRV KNLR+C DCHN K +S + R +I+RD R+HHF EG CSC
Sbjct: 688 VAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCR 747
Query: 503 DYW 505
DYW
Sbjct: 748 DYW 750
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 7/231 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + EE + +M++ N A+ C +L G Q+H +V+R G
Sbjct: 349 IIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTG 408
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + L+ +Y EA +F + +D V+WN +++ Y R+ R AL +F+
Sbjct: 409 YEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFE 468
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ +G KPD++T + VL AC+H G + G E H ++G +I +
Sbjct: 469 SM--ITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLG 526
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQ 226
+ G L A + + MP E D +W A++ ++G+ G A E M+
Sbjct: 527 RAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKME 577
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 30/296 (10%)
Query: 46 LMGGLQIHARVLRDGYQLDSQL-------MTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
LMGG + +L D QL Q+ T++ Y+ +A +LF+E P RD
Sbjct: 194 LMGGY-VKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFT 252
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
W ++ Y+++ +A +FD + ++ +++ +++ A ++ G ++
Sbjct: 253 WTAMVYAYVQDGMLDEARRVFDEMPQKR------EMSYNVMIAGYAQYKRMDMGRELFEE 306
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ GS N +I+ Y + G L A +F MP++D VSW+A+I+G A NG +A
Sbjct: 307 MPFPNIGS----WNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEA 362
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ M+R G + TF LSAC+ ++ G + ++ + GC+V
Sbjct: 363 MNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQ------VVRTGYEKGCLVG 416
Query: 279 --LLG---RAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
L+G + G +D+AY + + K D W T+L H V E +I
Sbjct: 417 NALVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLAGYARHGFGRQALTVFESMI 471
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 122/284 (42%), Gaps = 44/284 (15%)
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
Y+ + +A LFD +P++D V+WN ++S Y+R+ +A +FD + + S +
Sbjct: 105 YARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNS------I 158
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
+ +L A G LE ++ S+ ++ CN L+ Y K LG A ++F +
Sbjct: 159 SWNGLLAAYVRSGRLEEARRLFESKSDW----ELISCNCLMGGYVKRNMLGDARQLFDQI 214
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
P +D++SW+ MISG A +G A F VF T+T ++ A G++DE
Sbjct: 215 PVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVF----TWTAMVYAYVQDGMLDEAR 270
Query: 255 MFLDRMSK-------------------DFG-------ILPNIHHYGCVVDLLGRAGLLDQ 288
D M + D G PNI + ++ + G L Q
Sbjct: 271 RVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQ 330
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
A L M + DS W ++ + L E + L+E+K
Sbjct: 331 ARNLFDMMPQR-DSVSWAAIIAG---YAQNGLYEEAMNMLVEMK 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 51/240 (21%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD +P R++V++N +IS Y+RN + A LFD + ++
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKD-------------------- 94
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ N ++ Y++ L A +F MPEKDVVSW+AM+
Sbjct: 95 ---------------------LFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAML 133
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG +GH +A + F M ++ G+L+A G ++E + S D+ +
Sbjct: 134 SGYVRSGHVDEARDVFDRMPHKNSI----SWNGLLAAYVRSGRLEEARRLFESKS-DWEL 188
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ C++ + +L A QL + V+ D W T++ ++ R+ E
Sbjct: 189 IS----CNCLMGGYVKRNMLGDARQLFDQIPVR-DLISWNTMISGYAQDGDLSQARRLFE 243
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 37/253 (14%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N++I+ Y + +A ++F MP KD+ SW+ M++G A N RDA F +M V
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
++ +LS G VDE DRM I N G + + R+G L++A +
Sbjct: 128 ----SWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWN----GLLAAYV-RSGRLEEARR 178
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVT---LGERVIEHLIELKAQESGDYVLLLNLYSS 348
L S K D W + C + +V LG+ + ++ ++ + +++ Y+
Sbjct: 179 LFES---KSD---WELISCNCLMGGYVKRNMLGD-ARQLFDQIPVRDLISWNTMISGYAQ 231
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
GD + + L + +P +V+ +V D + ++E ++ DE+ ++
Sbjct: 232 DGDLSQARRL--------FEESPVRDVFTWTAMVYAYVQDGM----LDEARRVFDEMPQK 279
Query: 409 ------LKIAGYV 415
+ IAGY
Sbjct: 280 REMSYNVMIAGYA 292
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
C I+ + + G +A VF MP ++ VS++AMISG N A + F M +
Sbjct: 36 CTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL 95
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
F + TG + L D M+F KD + + ++ R+G +D+A
Sbjct: 96 FSWNLMLTGY---ARNRRLRDARMLFDSMPEKD------VVSWNAMLSGYVRSGHVDEAR 146
Query: 291 QLITSMGVKPDSTIWRTLLGA 311
+ M K +S W LL A
Sbjct: 147 DVFDRMPHK-NSISWNGLLAA 166
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 294/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ P +F K+R I + + C L G IH +++ G
Sbjct: 502 LINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG 561
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
++ D + L+D+Y+ A LF++ +D V WNV+I+ Y++N ++A+ F
Sbjct: 562 FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSF 621
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E P+ VT + VL A A+L A G H I + G+ S + NSLI MY+
Sbjct: 622 HQMRLE--NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 679
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L + ++F M KD VSW+AM+SG A++GHG AI F MQ + V D +F
Sbjct: 680 KCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC H GLV+EG MS + I P++ HY C+VDLLGRAGL D+ I M V+
Sbjct: 740 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 799
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD+ +W LLG+CR+H +V LGE ++HL++L+ + +V+L ++Y+ G W + R
Sbjct: 800 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 859
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
MN+ GL+ TPGCS + LK VH F V D SHP++ ++ + + + ++++ GYV + +
Sbjct: 860 SKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRS 919
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N+ E+K L HSE+LAI F +L TPPG+TI++ KNLR+C DCH K +S +
Sbjct: 920 CVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKIT 979
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF +G CSCNDYW
Sbjct: 980 TRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF+KM+ + N + A + L G +IH L+
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR 359
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + T LM +Y+ ++ +A +LF + RD VAW+ +I+ ++ +AL LF
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ KP+ VT + +L ACA L L+ G+ IH + + S ++ +L++MY+K
Sbjct: 420 EMQNQK--MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAK 477
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG A F M +D+V+W+++I+G A G +AI+ F ++ + + PD T GV
Sbjct: 478 CGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGV 537
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ +D+G + K G + H ++D+ + G L A L
Sbjct: 538 VPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTK 596
Query: 301 DSTIWRTLLGA 311
D W ++ A
Sbjct: 597 DEVTWNVIIAA 607
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 119/230 (51%), Gaps = 4/230 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY+ S E ++ M +K + + + +F +K C +L G+ H + R G
Sbjct: 100 MIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+D+YS A ++FD++P+RD VAWN +I+ +++ +A+ F
Sbjct: 160 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFR 219
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + G +P V+ L + L +E IH Y+ + S ++ N LI +YSK
Sbjct: 220 SM--QLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSK 275
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
CG + +A VF M ++D VSW M++G A NG + +E F M+ V
Sbjct: 276 CGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 135/267 (50%), Gaps = 19/267 (7%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQIHA+++ G++ +T L++LYS F K A +FD P + WN +I Y R+
Sbjct: 49 LQIHAQIIVSGFK-HHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
++ +AL ++ + E G +PD T VL+AC L+ G H I G +
Sbjct: 108 KQYNEALEMYYCM--VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVF 165
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ L+ MYSK G L A EVF MP++DVV+W+AMI+GL+ + +A++ F +MQ G
Sbjct: 166 IGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVG 225
Query: 230 VFPDDQT----FTGV--LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
V P + F G+ LS C + G +F +DF + ++DL +
Sbjct: 226 VEPSSVSLLNLFPGICKLSNIELCRSI-HGYVF----RRDFSSAVS----NGLIDLYSKC 276
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLG 310
G +D A ++ M V D W T++
Sbjct: 277 GDVDVARRVFDQM-VDQDDVSWGTMMA 302
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 276/423 (65%), Gaps = 6/423 (1%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +FD + RD V+W +I Y+R AL LF + + S KPD+ T + +L A
Sbjct: 234 EAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREM--QMSNVKPDEFTMVSILIA 291
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA LGALE GE + I ++ + + N+L+ MY KCG++ A +VFK M +KD +W
Sbjct: 292 CALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTW 351
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI GLA+NGHG +A+ F M A V PD+ T+ GVL AC +VD+G F M+
Sbjct: 352 TTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTM 407
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
GI P + HYGC+VDLLG G L++A ++I +M VKP+S +W + LGACR+HK+V L +
Sbjct: 408 QHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLAD 467
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+ ++EL+ + YVLL N+Y++ WE + ++R+ M E+G++ TPGCS + L G V
Sbjct: 468 MAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNV 527
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
+EFV D SHP+ EIY L+ + + L AGY + + +LG E+K AL HSEKLA
Sbjct: 528 YEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLA 587
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IA+ ++++ PG TIR+ KNLR+CVDCH+ AK++S YNRE+I++D+ RFHHFR G CSCN
Sbjct: 588 IAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCN 647
Query: 503 DYW 505
++W
Sbjct: 648 NFW 650
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 47/338 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ YS S PE G ++ M I + F F++K + +L G ++ ++ G
Sbjct: 78 MIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHG 137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + ++S A K+FD + V WN+++S Y R ++ + +
Sbjct: 138 FDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFKIS----- 192
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS----EHGYGSKMNLCNSLIA 176
LLVL AC+ L LE+G+ I +YI+ EH
Sbjct: 193 --------------KMLLVLSACSKLKDLEWGKHIFKYINGGIVEH-------------- 224
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
M++ CG + A VF M +DVVSW+AMI G H A+ F MQ + V PD+ T
Sbjct: 225 MFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFT 284
Query: 237 FTGVLSACSHCGLVDEGMMF---LDRMS-KDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+L AC+ G ++ G +D+ S K+ + N +VD+ + G + +A ++
Sbjct: 285 MVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGN-----ALVDMYFKCGNVRKAKKV 339
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
M K D W T++ I+ H + ++IE
Sbjct: 340 FKEMYQK-DKFTWTTMIVGLAINGHGEEALAMFSNMIE 376
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 138/347 (39%), Gaps = 57/347 (16%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIR 108
QIH+ ++ G D ++ E A ++FD IP WN +I Y +
Sbjct: 25 QIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSK 84
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ + ++ L S KPD T L+ AL+ G+++ + +HG+ S +
Sbjct: 85 ISHPENGVSMY--LLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNL 142
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ + I M+S CG + +A +VF +VV+W+ M+SG R
Sbjct: 143 FVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY----------------NRV 186
Query: 229 GVFPDDQTFTGVLSACSH-------------------------CGLVDEGMMFLDRMSKD 263
F + VLSACS CG +DE D M
Sbjct: 187 KQFKISKMLL-VLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTR 245
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTL 320
++ + ++D R A L M VKPD ++L AC + + L
Sbjct: 246 -----DVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALEL 300
Query: 321 GERVIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEK 365
GE V + I+ + ++ +V L+++Y G+ K K++ + M +K
Sbjct: 301 GEWV-KTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQK 346
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 9/207 (4%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEVFKGMPE 196
+L+ C + L+ +IH + + G S N +IA + G++ A +VF +P
Sbjct: 13 LLEKCKSMYQLK---QIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPH 69
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+ W+ MI G + H + + + M + + PD TF L + + G
Sbjct: 70 PSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKEL 129
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
L+ K G N+ + + G++D A+++ MG + W +L K
Sbjct: 130 LNHAVKH-GFDSNLFVQKAFIHMFSLCGIVDLAHKVF-DMGDACEVVTWNIMLSGYNRVK 187
Query: 317 HVTLGER--VIEHLIELKAQESGDYVL 341
+ + V+ +LK E G ++
Sbjct: 188 QFKISKMLLVLSACSKLKDLEWGKHIF 214
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/538 (38%), Positives = 297/538 (55%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
M+ Y +E L KMR I + + I C S G Q+HA +L++
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE 319
Query: 60 ---GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ + L+ LY K EA K+F +P R+ + WN ++S Y+ R +A
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 117 CLFDNLNREE-----------------------------SGCKPDDVTCLLVLQACAHLG 147
F+ + + G +P D L AC+ LG
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
ALE G ++H + GY S +++ N++I+MY+KCG + A VF MP D+VSW++MI+
Sbjct: 440 ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIA 499
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +GHG AIE F M + GVFPD TF VL+ACSH GLV++G + + M + +GI
Sbjct: 500 ALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P HY +VDL RAG+ A +I SM KP + +W LL CRIH ++ LG E
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L +L Q G YVLL N+Y+ VG W +V ++R+ M ++ ++ P CS I ++ VH F+V
Sbjct: 620 LFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMV 679
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
DD HP + +Y+ L+++ ++K GY+ + LH++ E+K +ALS HSEKLA+ FG+
Sbjct: 680 DDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGI 739
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ PPG T+RV KN+RIC DCHN K +S V RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 740 MKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 181/438 (41%), Gaps = 80/438 (18%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
M+ Y+ + LF MR+ + F + + + F Q+H V++
Sbjct: 118 MITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKT 177
Query: 60 GYQ-LDSQLMTTLMDLYSTFEKSF--------EACKLFDEIPQRDTVAWNVLISCYIRNQ 110
G + S ++ L+ +Y A KLFDE+P+RD + W +I+ Y+RN
Sbjct: 178 GMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRND 237
Query: 111 RTRDALCLFDNLNR-------------------EES----------GCKPDDVTCLLVLQ 141
A +F+ + +E+ G + DD+T ++
Sbjct: 238 DLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIIS 297
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLC----NSLIAMYSKCGSLGMAFEVFKGMPEK 197
ACA++G+ + G+++H YI ++ + C N+LI +Y K + A ++F MP +
Sbjct: 298 ACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR 357
Query: 198 DVVSWSA-------------------------------MISGLAMNGHGRDAIESFGAMQ 226
++++W+A MISGLA NG G + ++ F M+
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
G P D F G L+ACS G ++ G ++ G ++ ++ + + G++
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVH-LGYESSLSVGNAMISMYAKCGVV 476
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNL 345
+ A + +M D W +++ A H H G + IE + LK D + L +
Sbjct: 477 EAAESVFVTMP-SVDLVSWNSMIAALGQHGH---GVKAIELFDQMLKEGVFPDRITFLTV 532
Query: 346 YSSVGDWEKVKELREFMN 363
++ V++ R + N
Sbjct: 533 LTACSHAGLVEKGRHYFN 550
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 135/343 (39%), Gaps = 87/343 (25%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ------------------ 93
+HA ++ G++ + L+++Y A +LF+EIP
Sbjct: 35 VHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGN 94
Query: 94 ---------------RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
RD+V +N +I+ Y N AL LF + R++ +PDD T
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD--FRPDDFTFTS 152
Query: 139 VLQACA-HLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAMYSK--------CGSLGMAF 188
VL A +G + ++H + + G G ++ N+L+++Y K C ++ A
Sbjct: 153 VLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSAR 212
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
++F MP++D ++W+ MI+G N A E F AM V + ++S HCG
Sbjct: 213 KLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENLGAAWNAMISGYVHCG 268
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
E + +M +G++ D + T+
Sbjct: 269 CFQEALTLCRKMR---------------------------------FLGIQFDDITYTTI 295
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVL-----LLNLY 346
+ AC +G++V ++++ + + + L L+ LY
Sbjct: 296 ISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLY 338
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 299/494 (60%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF M + N F S +K C +L G Q+ ++ G+ + + +L
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ + +A K FD + +++ +++N +I Y +N + +AL LF+ + E+ G
Sbjct: 418 ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI--EDQGMGA 475
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
T +L A +G + GE+IH + + G ++CN+LI+MYS+CG++ AF+VF
Sbjct: 476 SAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVF 535
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ M +++V+SW+++I+G A +G A+E F M GV P++ T+ VLSACSH GLV+
Sbjct: 536 EDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVN 595
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG M + G++P + HY C+VD+LGR+G L +A Q I SM K D+ +WRT LGA
Sbjct: 596 EGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H ++ LG+ + +IE + + Y+LL NLY+S+ W++V +R+ M EK L
Sbjct: 656 CRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEA 715
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS + ++ VH+F V D SHP+ EIY L ++ ++K GYV + LH++ E+K
Sbjct: 716 GCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKE 775
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L HSEK+A+AFG+++T IRV KNLRIC DCH+ K +S RE+I+RD RF
Sbjct: 776 KLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRF 835
Query: 492 HHFREGRCSCNDYW 505
HH ++GRCSCN+YW
Sbjct: 836 HHIKDGRCSCNEYW 849
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 173/375 (46%), Gaps = 43/375 (11%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-P 92
S +K C++ S G +H ++ + QLDS + +L+ LYS + +A +F +
Sbjct: 70 SLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGS 129
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
RD ++W+ ++SC+ N AL F ++ E+G P++ +AC+ + G
Sbjct: 130 SRDLISWSAMVSCFANNNMGFRALLTF--VDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 153 EKIHRYISEHGY-GSKMNLCNSLIAMYSKC-GSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
+ I ++ + GY S + + LI M+ K G L AF+VF+ MPE++ V+W+ MI+ L
Sbjct: 188 DSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH------------------------ 246
G+ +AI+ F M +G PD T +GV+SAC++
Sbjct: 248 QFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 247 --CGLVD-------EGMMFLDRMSKDFGILPNIHHYGCVVD-LLGRAGLLDQAYQLITSM 296
C L++ +G M R D + N+ + ++ + + G ++A L M
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDW 352
V P+ + + L AC + +GE+V H ++L L+++Y+ G
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRI 427
Query: 353 EKVKELREFMNEKGL 367
+ ++ + + EK L
Sbjct: 428 DDARKAFDILFEKNL 442
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 192/445 (43%), Gaps = 52/445 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ ++ F M + N + + A + C + G I V++ G
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTG 198
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSF-EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
Y Q D + L+D++ A K+F+++P+R+ V W ++I+ ++ +A+ L
Sbjct: 199 YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDL 258
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L+ SG +PD T V+ ACA++ L G+++H HG + LI MY
Sbjct: 259 F--LDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMY 316
Query: 179 SKC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMN-GHGRDAIESFGAMQRAGVFPDD 234
+KC GS+ A ++F + + +V SW+AMI+G G+ +A++ F M V P+
Sbjct: 317 AKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH 376
Query: 235 QTFTGVLSACSHCGLVDEGMMF----------------------------LDRMSKDFGI 266
TF+ L AC++ + G +D K F I
Sbjct: 377 FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDI 436
Query: 267 L--PNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
L N+ Y V+D + ++A +L I G+ + + +LL + G
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Query: 322 ERVIEHLIE--LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
E++ +I+ LK +S L+++YS G+ E ++ E M ++ + I
Sbjct: 497 EQIHARVIKSGLKLNQSVCNA-LISMYSRCGNIESAFQVFEDMEDRNV--------ISWT 547
Query: 380 GVVHEFVVDDVSHPRINEIYQMLDE 404
++ F + + ++ML+E
Sbjct: 548 SIITGFAKHGFATQALELFHKMLEE 572
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + + EE LF ++ + + + F + + ++ G QIHARV++ G
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSG 507
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L+ + L+ +YS A ++F+++ R+ ++W +I+ + ++ AL LF
Sbjct: 508 LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ E G +P++VT + VL AC+H+G + G K + + +EHG +M ++ +
Sbjct: 568 KM--LEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILG 625
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ GSL A + MP K D + W + ++G+
Sbjct: 626 RSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN 661
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
I N R A+ +++ + G PD T L L+ C + + G +H +++
Sbjct: 42 INNGRLHKAISTLEHMVHQ--GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQL 99
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
NSLI++YSKCG A +F+ M +D++SWSAM+S A N G A+ +F M
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM 159
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEG 253
G +P++ F ACS V G
Sbjct: 160 IENGYYPNEYCFAAATRACSTAEFVSVG 187
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 302/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + L E M+Q + N + ++ C +L G ++H +++ G
Sbjct: 220 LIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSG 279
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + ++ +L+ +Y EA KLF ++P RD V W +++ Y + +A+ LF
Sbjct: 280 YGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFR 339
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ G KPD +T VL +C+ L+ G++IH+ + GY + L ++L++MY+K
Sbjct: 340 RM--QQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAK 397
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGL-AMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
CGS+ A VF M E++VV+W+A+I+G A +G R+A+E F M++ G+ PD TFT
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTS 457
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC+H GLV+EG M D+GI P + HY C VDLLGRAG L++A +I SM
Sbjct: 458 VLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFI 517
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P ++W LL ACR+H V GER E++++L + G YV L ++Y++ G +E +++R
Sbjct: 518 PGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVR 577
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M ++ + PG S I + G VH F V+D SHP +IY L ++ +Q+K GYV +
Sbjct: 578 QVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTR 637
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K L HSE+LAI +G++ TPPG IR+ KNLR+C DCH K +S V
Sbjct: 638 FVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVV 697
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I RD RFHHF +G CSC D+W
Sbjct: 698 GREIIARDAQRFHHFADGVCSCGDFW 723
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 185/409 (45%), Gaps = 59/409 (14%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C + SL G ++HA +L+ G Q + L TL+ +Y+ +A ++FD I R+ V+W
Sbjct: 57 CARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSW 116
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+I ++ + +A ++ + +GCKPD VT + +L A + L+ G+K+H I
Sbjct: 117 TAMIEAFVAGNKNLEAFKCYETMKL--AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEI 174
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
E G + + SL+ MY+KCG + A +F +PEK+VV+W+ +I+G A G A+
Sbjct: 175 VEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVAL 234
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG-----------------------MMF 256
E MQ+A V P+ TF +L C+ ++ G M+
Sbjct: 235 ELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMY 294
Query: 257 -----LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWR 306
L+ K F LP ++ + +V + G D+A L M G+KPD +
Sbjct: 295 CKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMN 363
++L +C + G+R+ + L+ A + D L L+++Y+ G + + M+
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVH--AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412
Query: 364 EKGL----QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
E+ + GC H R E + D++ KQ
Sbjct: 413 ERNVVAWTAIITGCCA---------------QHGRCREALEYFDQMKKQ 446
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 36/298 (12%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
+T+A + +S + R ++AL + + + + + D LL Q CA L +LE G +
Sbjct: 11 ETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLL--QECARLRSLEQGRE 68
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H I + G L N+L++MY+KCGSL A VF + ++++VSW+AMI
Sbjct: 69 VHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNK 128
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVDEGMMFLDRMSKD 263
+A + + M+ AG PD TF +L+A + H +V+ G+ R+
Sbjct: 129 NLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTS 188
Query: 264 -----------------FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPD 301
F LP N+ + ++ + G +D A +L+ +M V P+
Sbjct: 189 LVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPN 248
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYVLLLNLYSSVGDWEKVKEL 358
+ ++L C + G++V ++I+ +E L+ +Y G E+ ++L
Sbjct: 249 KITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKL 306
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/437 (43%), Positives = 272/437 (62%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ EA +F +PQ+D V+W +++ Y + + + L LF + R
Sbjct: 390 NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEW 449
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
C VL CA + ALE G ++H + + GYG + N+L+AMY KCGS+ A
Sbjct: 450 VNRSAFAC--VLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAH 507
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
F+ M E+DVVSW+ MI+G A +G G++A+E F M++ PDD T GVL+ACSH G
Sbjct: 508 SAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSG 567
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LV++G+ + M +DFG+ HY C++DLLGRAG LD+A L+ M +PDST+W L
Sbjct: 568 LVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGAL 627
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA RIH++ LG E + EL+ + +G YVLL N+Y+S G W V ++R M+E+G++
Sbjct: 628 LGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVK 687
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I ++ VH F V D HP +IY L++++ ++K AGYV+ LH++ E
Sbjct: 688 KVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEE 747
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + L YHSEKLA+A+G+L PPG IRV KNLR+C DCH K +S + R +I+RD
Sbjct: 748 EKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDS 807
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHFR+G CSC DYW
Sbjct: 808 NRFHHFRDGSCSCGDYW 824
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 15/229 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ AYS EE LF++M + + + + FAC + C +L G+Q+H+R+++
Sbjct: 423 MLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLHSRLIK 480
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + + L+ +Y EA F+E+ +RD V+WN +I+ Y R+ ++AL +
Sbjct: 481 AGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEV 540
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH---GYGSKMNLCNSLI 175
FD + + + KPDD+T + VL AC+H G +E G I + S H G +K +I
Sbjct: 541 FDTMRK--TSTKPDDITLVGVLAACSHSGLVEKG--ISYFYSMHRDFGVATKPEHYTCMI 596
Query: 176 AMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIE 220
+ + G L A + K MP E D W A++ ++ + GR+A E
Sbjct: 597 DLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAE 645
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 124/298 (41%), Gaps = 52/298 (17%)
Query: 54 ARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
AR L D + D+ LM Y + EA K+F+++PQRD V+WN ++S Y R
Sbjct: 250 ARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDM 309
Query: 113 RDALCLFDNLNREESGCKP--DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS---- 166
+A LFD P D T ++ A G LE +++ + + S
Sbjct: 310 AEARRLFD--------VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAM 361
Query: 167 -----------------------KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ N+++ Y++ G L A +F MP+KD VSW+
Sbjct: 362 MAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWA 421
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK- 262
AM++ + G + ++ F M R G + + F VLS C+ ++ GM R+ K
Sbjct: 422 AMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKA 481
Query: 263 DFGILPNIHHYGCVVD-----LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+G+ GC V + + G +++A+ M + D W T++ H
Sbjct: 482 GYGV-------GCFVGNALLAMYFKCGSMEEAHSAFEEMEER-DVVSWNTMIAGYARH 531
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 51/344 (14%)
Query: 21 MRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARV------LRDGYQLDSQLMTTLMD 73
MR R+P + + + +++ G + R+ R + DS TL+
Sbjct: 118 MRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLH 177
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+ LFDE+P +D+V++NV+IS + + A FD L E+ D
Sbjct: 178 ALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFD-LAPEK-----DA 231
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
V+ +L A G ++ ++ +E S N+L+A Y + + A ++F
Sbjct: 232 VSWNGMLAAYVRNGRIQEARELFDSRTEWDAIS----WNALMAGYVQRSQIEEAQKMFNK 287
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
MP++DVVSW+ M+SG A G +A F VF T+T ++S + G+++E
Sbjct: 288 MPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVF----TWTAIVSGYAQNGMLEEA 343
Query: 254 MMFLDRMSKD------------------------FGILP--NIHHYGCVVDLLGRAGLLD 287
D M F +P N+ + ++ +AG+LD
Sbjct: 344 KRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLD 403
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
+A + M K D+ W +L A + + E ++ E+
Sbjct: 404 EARAIFGMMPQK-DAVSWAAMLAA---YSQIGFSEETLQLFKEM 443
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/500 (38%), Positives = 296/500 (59%), Gaps = 7/500 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-----QIHARVLRDGYQLDSQ 66
+E M + +P + ++ + +K C+ + ++HA +R GY L +
Sbjct: 156 DEALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTH 215
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ TTL+D Y+ A +F +P+R+ V+W+ +I CY +N+R DA+ LF ++ +
Sbjct: 216 VATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASD 275
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+ P+ +T + VL ACA + AL G+ +H YI G+ S +++ N+L+AMY +CG L +
Sbjct: 276 ADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEV 335
Query: 187 AFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+FK + +DVVSW+++ISG M+G G +A++ F M G P TF VL ACS
Sbjct: 336 GRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACS 395
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLV+EG M + M ++G+ P HY C+VDLLGRAG LD+A +LI SM ++P +W
Sbjct: 396 HAGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVW 454
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
LLGACRIH HV E HL +L+ + +G+YVLL ++Y+ +V L+E + E
Sbjct: 455 GALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEH 514
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
L+ GCS I +K +H F D +P + ++ ++ E Q+K GYV + L+++
Sbjct: 515 ALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDI 574
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
EEK L HSEKLA+AFG++ T G IR+ KNLR+C DCH+ K +S RE+++
Sbjct: 575 EGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVV 634
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RD RFHHFR+G CSC DYW
Sbjct: 635 RDVNRFHHFRDGVCSCGDYW 654
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 146/330 (44%), Gaps = 16/330 (4%)
Query: 52 IHARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+H R+ D ++ D L T L++ Y+ A ++FDE P ++ WN L+
Sbjct: 94 VHRRLEADPVFRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALAD 153
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQAC-----AHLGALEFGEKIHRYISEHGYG 165
+AL ++ R G D + L+AC +H A ++H + GY
Sbjct: 154 HGDEALARLADMGR--LGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYA 211
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
++ +LI Y+K G + A VF MPE++VVSWSAMI A N DAIE F M
Sbjct: 212 LHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDM 271
Query: 226 --QRAGVFPDDQTFTGVLSACSHCGLVDEG-MMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
A + P+ T VL+AC+ + G ++ + + F L ++ ++ + R
Sbjct: 272 MASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSV--LNALMAMYMR 329
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES-GDYVL 341
G L+ + +G + D W +L+ +H +V E +I + S ++
Sbjct: 330 CGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFIS 389
Query: 342 LLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
+L S G + K L E M E G+ TP
Sbjct: 390 VLGACSHAGLVNEGKMLFESMVEYGV--TP 417
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/481 (43%), Positives = 291/481 (60%), Gaps = 9/481 (1%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVL--RDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
A C +K +G L RV LD+ T++ Y A ++F
Sbjct: 148 LAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCGDLEAAREVF 207
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
+P+R V+W+ +I IR +AL +FD + +G +PD V VL+ACAHLGA
Sbjct: 208 VRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMM--GNGFRPDAVVLSSVLKACAHLGA 265
Query: 149 LEFGEKIHRYISEHGYGSKMN---LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LE G +HR++ G G + L +L+ MY KCG + A+ VF G+ +DVV W+AM
Sbjct: 266 LERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQDVVLWNAM 325
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I GLAMNGHG+ A+E F M G P++ TF VL AC+H G VDEG M D G
Sbjct: 326 IGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFRSMC-DHG 384
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P HYGC+ DLLGRAGLL++A ++ M ++P ++ W L+ +C +H +V +GERV
Sbjct: 385 IEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVG 444
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ LIEL+ + G YV+L NLY+ G WE K LR+ M E+G + G S I G+VHEF
Sbjct: 445 KKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEF 504
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIA 444
D HP+ +IY +L+++ ++L++ GYV + + L ++ EE KGN LSYHSE+LA+A
Sbjct: 505 RSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVLMDMDDEEDKGNTLSYHSERLALA 564
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+L TP IR+ KNLR+C DCH +AK++S +Y RE+I+RDR RFH FR G CSCND+
Sbjct: 565 FGILNTPRHMPIRIVKNLRVCRDCHVYAKLVSKLYQREIIMRDRHRFHLFRGGVCSCNDF 624
Query: 505 W 505
W
Sbjct: 625 W 625
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 294/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ P +F K+R I + + C L G IH +++ G
Sbjct: 502 LINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG 561
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
++ D + L+D+Y+ A LF++ +D V WNV+I+ Y++N ++A+ F
Sbjct: 562 FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSF 621
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E P+ VT + VL A A+L A G H I + G+ S + NSLI MY+
Sbjct: 622 HQMRLE--NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 679
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L + ++F M KD VSW+AM+SG A++GHG AI F MQ + V D +F
Sbjct: 680 KCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC H GLV+EG MS + I P++ HY C+VDLLGRAGL D+ I M V+
Sbjct: 740 VLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 799
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD+ +W LLG+CR+H +V LGE ++HL++L+ + +V+L ++Y+ G W + R
Sbjct: 800 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 859
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
MN+ GL+ TPGCS + LK VH F V D SHP++ ++ + + + ++++ GYV + +
Sbjct: 860 SKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRS 919
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N+ E+K L HSE+LAI F +L TPPG+TI++ KNLR+C DCH K +S +
Sbjct: 920 CVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKIT 979
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF +G CSCNDYW
Sbjct: 980 TRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF+KM+ + N + A + L G +IH L+
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR 359
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + T LM +Y+ ++ +A +LF + RD VAW+ +I+ ++ +AL LF
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ KP+ VT + +L ACA L L+ G+ IH + + S ++ +L++MY+K
Sbjct: 420 EMQNQK--MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAK 477
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG A F M +D+V+W+++I+G A G +AI+ F ++ + + PD T GV
Sbjct: 478 CGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGV 537
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ +D+G + K G + H ++D+ + G L A L
Sbjct: 538 VPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTK 596
Query: 301 DSTIWRTLLGA 311
D W ++ A
Sbjct: 597 DEVTWNVIIAA 607
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 119/230 (51%), Gaps = 4/230 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY+ S E ++ M +K + + + +F +K C +L G+ H + R G
Sbjct: 100 MIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+D+YS A ++FD++P+RD VAWN +I+ +++ +A+ F
Sbjct: 160 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFR 219
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + G +P V+ L + L +E IH Y+ + S ++ N LI +YSK
Sbjct: 220 SM--QLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSK 275
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
CG + +A VF M ++D VSW M++G A NG + +E F M+ V
Sbjct: 276 CGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 135/267 (50%), Gaps = 19/267 (7%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQIHA+++ G++ +T L++LYS F K A +FD P + WN +I Y R+
Sbjct: 49 LQIHAQIIVSGFK-HHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
++ +AL ++ + E G +PD T VL+AC L+ G H I G +
Sbjct: 108 KQYNEALEMYYCM--VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVF 165
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ L+ MYSK G L A EVF MP++DVV+W+AMI+GL+ + +A++ F +MQ G
Sbjct: 166 IGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVG 225
Query: 230 VFPDDQT----FTGV--LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
V P + F G+ LS C + G +F +DF + ++DL +
Sbjct: 226 VEPSSVSLLNLFPGICKLSNIELCRSI-HGYVF----RRDFSSAVS----NGLIDLYSKC 276
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLG 310
G +D A ++ M V D W T++
Sbjct: 277 GDVDVARRVFDQM-VDQDDVSWGTMMA 302
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 305/505 (60%), Gaps = 7/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS ++ L M + + N + S ++ C + +H ++++G
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEG 189
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+++ + +A +FDE+ D + WN +I + +N R+ AL LF
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T VL+AC L LE G + H +I + Y + L N+L+ MY K
Sbjct: 250 RMKR--AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCK 305
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF M E+DV++WS MISGLA NG+ ++A++ F M+ +G P+ T GV
Sbjct: 306 CGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGV 365
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G + M K +GI P HYGC++DLLG+AG LD A +L+ M +P
Sbjct: 366 LFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEP 425
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ WRTLLGACR+ +++ L E + +I L +++G Y LL N+Y++ W+ V+E+R
Sbjct: 426 DAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRT 485
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PGCS I + +H F++ D SHP+I E+ + L+++ +L GYV E
Sbjct: 486 RMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNF 545
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L E+ ++L +HSEKLA+AFG++ P IR+ KNLRIC DCH F K+ S +
Sbjct: 546 VLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEI 605
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++IRD +R+HHF++G+CSC DYW
Sbjct: 606 RSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 15/277 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
IKCC+ ++ G I + +G++ L+ L+++Y F +A +LFD++PQR+
Sbjct: 68 IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++W +IS Y + + + AL L + R+ +P+ T VL++C + + +H
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRD--NVRPNVYTYSSVLRSCNGMSDVRM---LH 182
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I + G S + + ++LI +++K G A VF M D + W+++I G A N
Sbjct: 183 CGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHY 273
A+E F M+RAG + T T VL AC+ L++ GM + + + +D IL N
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL-ILNN---- 297
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+VD+ + G L+ A ++ M + D W T++
Sbjct: 298 -ALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMIS 332
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 100 NVLISCYIRNQRTRD---ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+L+S + R RD A+ D+L + G D T +++ C A+ G I
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSL--QSHGLWADSATYSELIKCCISNRAVHEGNLIC 84
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
R++ +G+ M L N LI MY K L A ++F MP+++V+SW+ MIS + +
Sbjct: 85 RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACS--------HCGLVDEGMMFLDRMSKDFGILP 268
A+E M R V P+ T++ VL +C+ HCG++ EG+
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE------------S 192
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
++ ++D+ + G + A + M V D+ +W +++G
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIG 233
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 277/437 (63%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ +A FD +PQRD+++W +I+ Y ++ +AL LF + R+ G
Sbjct: 332 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD--G 389
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ + T L CA + ALE G+++H + + G S + N+L+ MY KCG++ A+
Sbjct: 390 ERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAY 449
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF+G+ EK+VVSW+ MI+G A +G G++A+ F +M++ G+ PDD T GVLSACSH G
Sbjct: 450 IVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG 509
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LVD+G + M++D+GI N HY C++DLLGRAG LD A L+ +M +PD+ W L
Sbjct: 510 LVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGAL 569
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA RIH + LGE+ + + E++ SG YVLL NLY++ G W V +R M ++G++
Sbjct: 570 LGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVK 629
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S + ++ +H F V D HP + IY L+E++ ++K GYV+ LH++ E
Sbjct: 630 KVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEE 689
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + L YHSEKLA+AFG+LA P G IRV KNLR+C DCHN K +S + R +I+RD
Sbjct: 690 EKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDS 749
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF G+CSC DYW
Sbjct: 750 HRFHHFNGGQCSCGDYW 766
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S EE +LF +M++ N + + C + +L G Q+H RV++ G
Sbjct: 365 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 424
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +Y +A +F+ I +++ V+WN +I+ Y R+ ++AL LF+
Sbjct: 425 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 484
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + +G PDDVT + VL AC+H G ++ G E + ++G + +I +
Sbjct: 485 SMKK--TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLG 542
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A + K MP E D +W A++ ++G+
Sbjct: 543 RAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 578
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ D T++ Y+ + EA +LF+E P RD W ++S Y++N +A +FD
Sbjct: 232 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 291
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ + S V+ ++ ++ ++ + S N++I Y++
Sbjct: 292 MPEKNS------VSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS----WNTMITGYAQN 341
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G + A F MP++D +SW+A+I+G A +G+G +A+ F M+R G + TFT L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
S C+ ++ G R+ K G+ + ++ + + G +D AY I G++
Sbjct: 402 STCAEIAALELGKQVHGRVVKA-GLESGCYVGNALLVMYCKCGNIDDAY--IVFEGIEEK 458
Query: 302 STI-WRTLLGACRIH 315
+ W T++ H
Sbjct: 459 EVVSWNTMIAGYARH 473
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 31/252 (12%)
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE--------SGCK 130
+K + A +LF+++P RD V+WNV+IS +R + R A LFD + + SG
Sbjct: 94 DKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYA 153
Query: 131 P-----------DDVTCLLVLQACAHLGALEFGEKIH--RYISEHGYGSKMNLCNSLIAM 177
D++ C + L A +I R + E ++ N ++
Sbjct: 154 QNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGG 213
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y K L A +F MPE+D VSW+ MISG A NG +A F VF T+
Sbjct: 214 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVF----TW 269
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
T ++S G++DE D M + + N G V + +DQA +L +M
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYV-----QCKRMDQARELFEAMP 324
Query: 298 VKPDSTIWRTLL 309
+ S+ W T++
Sbjct: 325 CQNVSS-WNTMI 335
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D V WN+ I+ ++RN + AL LF+++ R S ++ ++ C +
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSS------ISWNAMISGCLSNDKFYLARQ 101
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+ + S N +I+ + +L A +F MPE+DVVSW+AM+SG A NG+
Sbjct: 102 LFEKMPTRDLVS----WNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGY 157
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
++A E F M + ++ G+L+A G +++ + + D+ ++ +
Sbjct: 158 VKEAKEIFDEMP----CKNSISWNGMLAAYVQNGRIEDARRLFESKA-DWELIS----WN 208
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
C++ + L A + M + D W T++ + + +R+ E E +
Sbjct: 209 CMMGGYVKRNRLVDARGIFDRMPER-DEVSWNTMISGYAQNGELLEAQRLFE---ESPVR 264
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ + +++ Y G ++ + + + M EK
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEK 295
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 253/367 (68%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ACA + ALE G+++H I + G+ +++ N L+ MY KCG + A EVF + E D
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V SW+AMISGLA +G G++A+ F M + GV P+ TF VLS CSH GLVDEG + D
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M++D GI P HY C+VDL GRAG LD+A I M V+P++++W +LLGACR+H ++
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L ER +E LIEL + G YVLL N+Y++ G W+ ++R+ M ++ ++ PGCS I +
Sbjct: 184 ELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
+ VH F+V D SHP+I EIY+ L+ + Q+K AGY+ LH++ E+K L +HS
Sbjct: 244 QNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHS 303
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG+++TPPGTTIRV KNLR+C DCH K +S + +RE+++RD RFHHF++G+
Sbjct: 304 EKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQ 363
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 364 CSCGDYW 370
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C +L G Q+HA +++ G++LD + L+D+Y + +A ++F ++ + D
Sbjct: 5 LRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDV 64
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+WN +IS ++ ++A+ LF+ + ++G KP+ +T ++VL C+H G ++ G
Sbjct: 65 ASWNAMISGLAQHGCGKEAVLLFEQM--LQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122
Query: 157 RYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
++ +HG K + ++ ++ + G L A MP E + W +++ ++G+
Sbjct: 123 DSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGN 182
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 295/505 (58%), Gaps = 10/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + ++ F LF M +K N + S I ++ L +++ V
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYKNVGMKS 228
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ ++T Y F K A ++F + ++ V WN +I+ Y+ N R D L +F
Sbjct: 229 VVVETAMLTG----YMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ES +P+ ++ VL C++L AL G ++H+ +S+ C SLI+MY K
Sbjct: 285 TM--IESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCK 342
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A+++F MP KDV+SW+AMISG A +G GR A+ F M+ + PD TF V
Sbjct: 343 CGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAV 402
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+H G VD G+ + M K+FGI HY CV+DLLGRAG LD+A LI M KP
Sbjct: 403 ILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKP 462
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ I+ TLLGACRIHK++ L E +L+ L + YV L N+Y++ W++V ++R+
Sbjct: 463 HAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRK 522
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E + PG S I +K V HEF D HP + I++ L+E++ ++K+AGYV ++
Sbjct: 523 MMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEF 582
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K L +HSEKLAIAFG++ T PGT IRV KNLR+C DCH K +S +
Sbjct: 583 ALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEK 642
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHFR G CSC DYW
Sbjct: 643 REIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 52/279 (18%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LFD+IP+ D+V++N+++ CY+R+ AL F+ + ++
Sbjct: 123 EAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIAS------------- 169
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
N+LI+ +++ G + AF++F MPEK+ VSW
Sbjct: 170 ----------------------------WNTLISGFAQNGQMQKAFDLFSVMPEKNGVSW 201
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
SAMISG +G A E + + V + TG + G V+ RM+
Sbjct: 202 SAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMK----FGKVELAERIFQRMAV 257
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+ N G V + GL + ++ + V+P+ ++L C + LG
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGL--KVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR 315
Query: 323 RVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKEL 358
++ H + K+ S D L+++Y GD + +L
Sbjct: 316 QM--HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKL 352
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/416 (45%), Positives = 275/416 (66%), Gaps = 3/416 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA LF E+P RD V+WN +++CY + + +AL LFD + G KP + T + +L A
Sbjct: 146 EAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM--RAVGVKPTEATVVSLLSA 203
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CAHLGAL+ G +H YI+++ + +L+ MY+KCG + +A +VF M KDV++W
Sbjct: 204 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 263
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ +I+G+A++GH ++A + F M+ A V P+D TF +LSACSH G+VDEG LD MS
Sbjct: 264 NTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSS 323
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+GI P + HY CV+DLL RAGLL++A +LI +M ++P+ + LLG CRIH + LGE
Sbjct: 324 SYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGE 383
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
V + LI L+ SG Y+LL N+Y++ W+ +++R M G+ PG S I LKG+V
Sbjct: 384 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 443
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKGNALSYHSEKL 441
H FV D SHP N+IY L+EI+ +LK A GY A+ + L ++ E+K +AL+ HSEKL
Sbjct: 444 HRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKL 503
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREG 497
AIA+G+L IR+ KNLR+C DCH+ K++S VY RE+I+RDR RFHHF +G
Sbjct: 504 AIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDG 559
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 166/330 (50%), Gaps = 13/330 (3%)
Query: 35 FAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR 94
F IK C + GL +H V++ G++ DS ++ +L+ LY+ + A +LF R
Sbjct: 5 FVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDR 64
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D V+WN +I Y++ +FD + C+ D ++ ++ A +G ++ ++
Sbjct: 65 DVVSWNAMIDGYVKRGEMGHTRMVFDRMV-----CR-DVISWNTIINGYAIVGKIDEAKR 118
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+ + E S NS+++ + KCG++ AF +F MP +DVVSW++M++ A G
Sbjct: 119 LFDEMPERNLVS----WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGK 174
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
+A+ F M+ GV P + T +LSAC+H G +D+G + L D I N
Sbjct: 175 PNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGT 233
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
+VD+ + G + A Q+ +M K D W T++ IH HV +++ + + E +
Sbjct: 234 ALVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVE 292
Query: 335 ESG-DYVLLLNLYSSVGDWEKVKELREFMN 363
+ +V +L+ S G ++ ++L + M+
Sbjct: 293 PNDITFVAMLSACSHAGMVDEGQKLLDCMS 322
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ P E LF++MR + PT S + C +L GL +H + +
Sbjct: 165 MLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSL-LSACAHLGALDKGLHLHTYINDN 223
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+++S + T L+D+Y+ K A ++F+ + +D +AWN +I+ + ++A LF
Sbjct: 224 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLF 283
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMY 178
+ +E+ +P+D+T + +L AC+H G ++ G+K+ + S +G K+ + +I +
Sbjct: 284 KEM--KEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLL 341
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
++ G L A E+ MP E + + A++ G ++G+
Sbjct: 342 ARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGN 378
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
+T V++AC FG +H ++ + G+ + NSLI +Y+ LG A ++F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
++DVVSW+AMI G G F M V D ++ +++ + G +DE
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEA 116
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
D M + N+ + ++ + G +++A+ L + M + D W ++L AC
Sbjct: 117 KRLFDEMPER-----NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSML-AC 168
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/494 (41%), Positives = 292/494 (59%), Gaps = 3/494 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M+++ I + F S IK C + G QIHA + + Q D + +TL+
Sbjct: 302 EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+LYS + + K F+ P+ D V+W +I+ Y +N + AL LF L SG KPD
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYEL--LASGKKPD 419
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ +L ACA + A GE++H Y + G G+ + NS I+MY+K G+L A F+
Sbjct: 420 EFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFE 479
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+ DVVSWS MI A +GH +DAI F M+ G+ P+ TF GVL+ACSH GLV+E
Sbjct: 480 EIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEE 539
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G+ + + M KD+ + N+ H C+VDLL RAG L A I + G +WRTLL C
Sbjct: 540 GLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGC 599
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
RI+K + G+ V E LIEL QES YVLL N+Y+ G ++RE M ++G++ PG
Sbjct: 600 RIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPG 659
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I + VH FVV D+SHP IY+ L+ + ++ + GY+ + + E KG
Sbjct: 660 QSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGT 719
Query: 433 -ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+++HSEKLA++FG+++ PP ++V KNLR+C DCH K++S V RE+I+RD LRF
Sbjct: 720 LGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRF 779
Query: 492 HHFREGRCSCNDYW 505
HHF+EG CSCNDYW
Sbjct: 780 HHFKEGSCSCNDYW 793
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC-MKFCSLMG-GLQIHARVLR 58
++ Y+ + EE L KM + N F A+K C + +++ G +H ++
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVK 241
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-----TR 113
G LD + T L+D+Y+ +A +LF P ++ V +N +I+ +I+ +
Sbjct: 242 QGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY 301
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+AL LF + R+ G KP D T +++ C H+ A E+G++IH +I +H S + ++
Sbjct: 302 EALKLFSQMQRQ--GIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGST 359
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
LI +YS GS + F P+ D+VSW+ MI+G A NG A+ F + +G PD
Sbjct: 360 LIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPD 419
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKD-FGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ T +LSAC+ G K G L + + + + ++G LD A
Sbjct: 420 EFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQN--SQISMYAKSGNLDSAK-- 475
Query: 293 ITSMGVK-PDSTIWRTLLGACRIHKH 317
IT +K PD W ++ + H H
Sbjct: 476 ITFEEIKNPDVVSWSVMICSNAQHGH 501
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 145/346 (41%), Gaps = 51/346 (14%)
Query: 14 GFY-----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
GFY LF + R + + F+ + + C + G IH + G L
Sbjct: 89 GFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLT 148
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+D+Y E+ A LF+ + D V+WN LI+ Y R + L L ++ +G
Sbjct: 149 NLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHH--TG 206
Query: 129 CKPDDVTCLLVLQACAHLG---ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
+ + T L++C +L + +G+ +H Y + G + + +L+ MY+K G LG
Sbjct: 207 LRLNAFTLGSALKSC-YLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLG 265
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGH-----GRDAIESFGAMQRAGVFPDDQTFTGV 240
A ++F+ P ++VV ++AMI+G +A++ F MQR G+ P D TF+ +
Sbjct: 266 DAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSI 325
Query: 241 LSACSHCGLVDEGMMFLDRMSKD----------------------------FGILPNIHH 272
+ C+H + G + K F P +
Sbjct: 326 IKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDI 385
Query: 273 YGCVVDLLGRA--GLLDQA----YQLITSMGVKPDSTIWRTLLGAC 312
+ G A G + A Y+L+ S G KPD I T+L AC
Sbjct: 386 VSWTTMIAGYAQNGQFESALALFYELLAS-GKKPDEFIITTMLSAC 430
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 7/269 (2%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P + A + ++ K S + G HA +++ + L+ ++LYS + + A K
Sbjct: 6 PLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQK 65
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC-KPDDVTCLLVLQACAH 145
LFD + +R +++N+LIS Y A+ LF + C K D + VL AC
Sbjct: 66 LFDRMSERSVISYNILISGYGGMGFYHKAIGLF---SEARMACLKLDKFSYAGVLSACGQ 122
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ G+ IH G G ++ L N LI MY KC + A +F+ E D VSW+++
Sbjct: 123 IKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSL 182
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--SHCGLVDEGMMFLDRMSKD 263
I+G A G + ++ M G+ + T L +C + +V G K
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQ 242
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
G+ +I ++D+ + G L A QL
Sbjct: 243 -GLDLDIVVGTALLDMYAKTGYLGDAIQL 270
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 8/212 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF ++ + F + + C + G Q+H ++ G
Sbjct: 391 MIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTG 450
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + +Y+ A F+EI D V+W+V+I ++ +DA+ LF+
Sbjct: 451 IGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFE 510
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL--CNSLIAMY 178
+ + G P+ +T L VL AC+H G +E G + + + + Y K+N+ C ++ +
Sbjct: 511 LM--KSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKK-DYDMKINVKHCTCIVDLL 567
Query: 179 SKCGSL--GMAFEVFKGMPEKDVVSWSAMISG 208
S+ G L F + G + V+ W ++SG
Sbjct: 568 SRAGRLLDAKNFILNSGFGDHPVM-WRTLLSG 598
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/457 (41%), Positives = 282/457 (61%), Gaps = 2/457 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G ++H V+R G D+ + + L D+Y+ F + +A +FD +P RD V+W ++ Y
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
R + LF + R SG P++ T VL+ACA + + G+++H +++ G
Sbjct: 241 AGRDGEGFRLFVRMMR--SGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSC 298
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
++L+ MYSK G +G A VF+GMP+ D+VSW+AMISG A NG +A+ F + +
Sbjct: 299 FAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSS 358
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G PD TF GVLSAC+H GLVD+G+ + +GI HY CV+DLL R+GL ++
Sbjct: 359 GFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFER 418
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A +I +M VKP+ +W +LLG CRIHK+V L E L E++ + YV L N+Y+S
Sbjct: 419 AEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYAS 478
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
VG +++V+ +R M +G+ P S I + VH F+V D SHP+ EIY +L ++ +
Sbjct: 479 VGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVK 538
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
++ GYVA+ LH++ E+K + YHSE+LA+AFG++ATP G+ I+V KNLRIC DC
Sbjct: 539 MREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDC 598
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K++S + RE+I+RD RFHHF+ G CSC DYW
Sbjct: 599 HTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 158/363 (43%), Gaps = 50/363 (13%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--------EACKLFDEIPQRDTVAWNV 101
L H L D L S L +T + Y+T + A LFD +P+RD +W+
Sbjct: 70 LSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSA 129
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPD-DVTCLLVLQACAHLGALEFGEKIHRYIS 160
++S ++R+ + R AL ++ + RE G D + T L A G ++H ++
Sbjct: 130 IVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVV 189
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
G + + ++L MY+K G L A VF MP +DVVSW+AM+ G +
Sbjct: 190 RRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFR 249
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK------------------ 262
F M R+G+ P++ T+ GVL AC+ G RM+K
Sbjct: 250 LFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYS 309
Query: 263 ---DFGIL---------PNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRT 307
D G P++ + ++ + G D+A + ++ S G +PD +
Sbjct: 310 KYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVG 369
Query: 308 LLGACRIHKHVTLGER--VIEHLIELK--AQESGD-YVLLLNLYSSVGDWEKVKELREFM 362
+L AC H L ++ I H I+ K + + D Y +++L S G +E+ +++ M
Sbjct: 370 VLSAC---AHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTM 426
Query: 363 NEK 365
K
Sbjct: 427 PVK 429
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/457 (42%), Positives = 286/457 (62%), Gaps = 5/457 (1%)
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
+ + G Q DS+++T +Y +F + A +F++IP + WNV+I + + R
Sbjct: 500 SNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFL 559
Query: 114 DALCLFDN-----LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+L L+ L + SG P+ V+ L VL AC +LGAL GE H Y+ + G+ +
Sbjct: 560 SSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDI 619
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ +++ MYSKCGSL +A +F KD+V WSAMI+ ++GHGR AI+ F M +A
Sbjct: 620 LVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKA 679
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
GV P TFT VLSACSH GL++EG M+ M+++F I + +Y C+VDLLGRAG L +
Sbjct: 680 GVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSE 739
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A LI +M V+PD++IW +LLGACRIH ++ L E++ +HL L +G +VLL N+Y++
Sbjct: 740 AVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAA 799
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W +V+++R+ M +G G S + VH+F V D SHP+ ++Y L+E+
Sbjct: 800 KSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAP 859
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K GYV LH++ E K ALSYHSE+LAIAFG++ T PGTT+R+ KNLRIC DC
Sbjct: 860 MKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDC 919
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
HN K++S + NR +++RD RFH F +G CSC DYW
Sbjct: 920 HNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 73/331 (22%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y ++ PEE LF +M V+ D
Sbjct: 176 MVTGYQQNNDPEEALALFSQM----------------------------------VMMDC 201
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L+ +L++LY+ A LF ++P++D ++W+ +I+CY N+ +AL LF
Sbjct: 202 FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFH 261
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E +P+ VT + LQACA LE G+KIH+ IA++
Sbjct: 262 EMI--EKRFEPNSVTVVSALQACAVSRNLEEGKKIHK-----------------IAVW-- 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
KDVVSW A++SG A NG ++ F M G+ PD +
Sbjct: 301 ----------------KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKI 344
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+A S G+ + + + + G N+ +++L + G L A +L M V+
Sbjct: 345 LAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR- 402
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
D IW +++ A IH + + +I++
Sbjct: 403 DVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 14/323 (4%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+H++V + G D+ T L LY+ A K+FDE P + WN + Y R +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG-YGSKMN 169
+ + L LF +L +G PD+ T + L+ACA L LE G+ IH + ++ GS M
Sbjct: 82 QWEETLRLF-HLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++L+ +YSKCG +G A +VF+ D V W++M++G N +A+ F M
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 230 VFPDDQTFT-GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
F D +L+ + G +M + ++ + ++ ++
Sbjct: 201 CFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK-----DVISWSTMIACYANNEAANE 255
Query: 289 AYQLITSMGVK---PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
A L M K P+S + L AC + +++ G+++ H I + ++ +V LL+
Sbjct: 256 ALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI--HKIAV-WKDVVSWVALLSG 312
Query: 346 YSSVGDWEKVKELREFMNEKGLQ 368
Y+ G K + M G+Q
Sbjct: 313 YAQNGMAYKSMGVFRNMLSDGIQ 335
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTN----PFACSF--AIKCCMKFCSLMGGLQIH 53
M+R ++ L+ KM +K + P N P S + C +L G H
Sbjct: 548 MIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFH 607
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
+ V++ G++ D + T +MD+YS A LFDE +D V W+ +I+ Y + R
Sbjct: 608 SYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGR 667
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCN 172
A+ LFD + + +G +P VT VL AC+H G LE G+ + ++E K++
Sbjct: 668 KAIDLFDQMVK--AGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 725
Query: 173 SLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
++ + + G L A ++ + MP E D W +++
Sbjct: 726 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/502 (41%), Positives = 296/502 (58%), Gaps = 3/502 (0%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y S+ + F M + IP + + AIK +L G QI A ++ G+ D
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ + ++D+Y A +LF EI + D VAW +IS YI N AL ++ +L R
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY-HLMR 1192
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
SG +PD+ T +++A + L ALE G++IH + + Y + SL+ MY KCGS+
Sbjct: 1193 V-SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A+ VF+ M + VV W+AM+ GLA +GH +A+ F MQ G+ PD TF GVLSAC
Sbjct: 1252 QDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
SH GL E + D M K +GI P I HY C+VD LGRAG + +A +I SM K +++
Sbjct: 1312 SHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASM 1371
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
+R LLGACR +RV + L+ L +S YVLL N+Y++ W+ V + R M
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG-YVAEITSELH 423
K ++ PG S I +K VH FVVDD SHP+ + IY+ ++++ K+++ G YV + L
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLL 1491
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ EEK AL YHSEKLAIAFG+++TPP TIRV KNLR+C DCH+ K +S + RE+
Sbjct: 1492 DVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREI 1551
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFHHFR G CSC DYW
Sbjct: 1552 VLRDANRFHHFRNGTCSCGDYW 1573
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 7/264 (2%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G QIHA V++ + + +LM++YS + A K F P+ D ++WN +IS Y +
Sbjct: 913 GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF---GEKIHRYISEHGYG 165
N +A+C F +L R+ G KPD T VL+AC+ E+ G ++H Y + G
Sbjct: 973 NNLEMEAICTFRDLLRD--GLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + +LI +YSK G + A + G + D+ SW+A++ G + R A+E F M
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
G+ D+ T + A + +G + + G ++ V+D+ + G
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGKQ-IQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
+ A +L + +PD W T++
Sbjct: 1150 MPNALELFGEIS-RPDEVAWTTMI 1172
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+F + AWN ++ ++ + A+ F L R G D VT +++L A
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG--HDSVTLVIILSAA 904
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L+ GE+IH + + + + + NSL+ MYSK G + A + F PE D++SW+
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-----LD 258
MIS A N +AI +F + R G+ PD T VL ACS DEG F +
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVH 1021
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
+ GI+ + ++DL + G +D+A L+
Sbjct: 1022 VYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 38 KCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV 97
+ + L G + HAR++ G D L L+ +YS A ++FD+ RD V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 98 AWNVLISCYIR-----NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
WN +++ Y + + + LF L E G +T +L+ C G ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLL--REFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
E +H Y + G+ + + +L+ +Y K G +G A +F MPE+D V W+ M+ N
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 213 GHGRDAIESFGAMQRAGVFPD 233
+A+ F A R+G PD
Sbjct: 797 SFQDEALRFFSAFHRSGFXPD 817
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + ++ MR + + + + IK +L G QIHA V++
Sbjct: 1171 MISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLD 1230
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y LD + T+L+D+Y +A ++F ++ R V WN ++ ++ +AL LF
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +G +PD VT + VL AC+H G K +G ++ + L+
Sbjct: 1291 TM--QSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALG 1348
Query: 180 KCGSLGMAFEVFKGMPEKDVVS 201
+ G + A V MP K S
Sbjct: 1349 RAGRIQEAENVIASMPFKASAS 1370
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ L+ G++ H I G L N+LI MYSKCGSL A +VF ++D+V+W+++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 206 ISGLAMNGHGR-----DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
++ A + FG ++ G T +L C G V
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
K G ++ G +V++ + GL+ QA L M + D+ +W +L A
Sbjct: 744 VK-IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 277/437 (63%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ +A FD +PQRD+++W +I+ Y ++ +AL LF + R+ G
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD--G 308
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ + T L CA + ALE G+++H + + G S + N+L+ MY KCG++ A+
Sbjct: 309 ERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAY 368
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF+G+ EK+VVSW+ MI+G A +G G++A+ F +M++ G+ PDD T GVLSACSH G
Sbjct: 369 IVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG 428
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LVD+G + M++D+GI N HY C++DLLGRAG LD A L+ +M +PD+ W L
Sbjct: 429 LVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGAL 488
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA RIH + LGE+ + + E++ SG YVLL NLY++ G W V +R M ++G++
Sbjct: 489 LGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVK 548
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S + ++ +H F V D HP + IY L+E++ ++K GYV+ LH++ E
Sbjct: 549 KVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEE 608
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + L YHSEKLA+AFG+LA P G IRV KNLR+C DCHN K +S + R +I+RD
Sbjct: 609 EKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDS 668
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF G+CSC DYW
Sbjct: 669 HRFHHFNGGQCSCGDYW 685
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S EE +LF +M++ N + + C + +L G Q+H RV++ G
Sbjct: 284 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 343
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +Y +A +F+ I +++ V+WN +I+ Y R+ ++AL LF+
Sbjct: 344 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 403
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + +G PDDVT + VL AC+H G ++ G E + ++G + +I +
Sbjct: 404 SMKK--TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLG 461
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A + K MP E D +W A++ ++G+
Sbjct: 462 RAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 497
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ D T++ Y+ + EA +LF+E P RD W ++S Y++N +A +FD
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ + S V+ ++ ++ ++ + S N++I Y++
Sbjct: 211 MPEKNS------VSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS----WNTMITGYAQN 260
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G + A F MP++D +SW+A+I+G A +G+G +A+ F M+R G + TFT L
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 320
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
S C+ ++ G R+ K G+ + ++ + + G +D AY I G++
Sbjct: 321 STCAEIAALELGKQVHGRVVKA-GLESGCYVGNALLVMYCKCGNIDDAY--IVFEGIEEK 377
Query: 302 STI-WRTLLGACRIH 315
+ W T++ H
Sbjct: 378 EVVSWNTMIAGYARH 392
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD++P+RD V+WN ++S Y +N ++A +FD E CK + ++ +L A
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD-----EMPCK-NSISWNGMLAAYVQN 105
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G +E R + E ++ N ++ Y K L A +F MPE+D VSW+ MI
Sbjct: 106 GRIEDA----RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMI 161
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A NG +A F VF T+T ++S G++DE D M + +
Sbjct: 162 SGYAQNGELLEAQRLFEESPVRDVF----TWTAMVSGYVQNGMLDEARRVFDGMPEKNSV 217
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
N G V + +DQA +L +M + S+ W T++
Sbjct: 218 SWNAIIAGYV-----QCKRMDQARELFEAMPCQNVSS-WNTMI 254
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 39/312 (12%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEAC 85
P F ++ C+++ +L AR+L D + D ++ Y+ EA
Sbjct: 27 PEFDFLERHDLRGCVRYRNLRA-----ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAK 81
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++FDE+P +++++WN +++ Y++N R DA LF++ E L+ C
Sbjct: 82 EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWE-----------LISWNCMM 130
Query: 146 LGALEFGEKIHRYISEHGYGSKMN-----LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
G + K +R + G +M N++I+ Y++ G L A +F+ P +DV
Sbjct: 131 GGYV----KRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVF 186
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
+W+AM+SG NG +A F M + ++ +++ C +D+ + M
Sbjct: 187 TWTAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAIIAGYVQCKRMDQARELFEAM 242
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
N+ + ++ + G + QA M + DS W ++ +
Sbjct: 243 P-----CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR-DSISWAAIIAG---YAQSGY 293
Query: 321 GERVIEHLIELK 332
GE + +E+K
Sbjct: 294 GEEALHLFVEMK 305
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F MPE+DVVSW+AM+SG A NG+ ++A E F M + ++ G+L+A G
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNGR 107
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+++ + + D+ ++ + C++ + L A + M + D W T++
Sbjct: 108 IEDARRLFESKA-DWELIS----WNCMMGGYVKRNRLVDARGIFDRMPER-DEVSWNTMI 161
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ + +R+ E E ++ + +++ Y G ++ + + + M EK
Sbjct: 162 SGYAQNGELLEAQRLFE---ESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK 214
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/493 (42%), Positives = 289/493 (58%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF + + + + F + C + L G I + G + + T+L+
Sbjct: 186 EALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLV 245
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ EA ++FD + ++D V W+ LI Y N ++AL +F + RE +PD
Sbjct: 246 DMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQREN--VRPD 303
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ V AC+ LGALE G + + S L +LI Y+KCGS+ A EVFK
Sbjct: 304 CYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFK 363
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
GM KD V ++A+ISGLAM GH A FG M + G+ PD TF G+L C+H GLVD+
Sbjct: 364 GMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDD 423
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + MS F + P I HYGC+VDL RAGLL +A LI SM ++ +S +W LLG C
Sbjct: 424 GHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGC 483
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+HK L E V++ LIEL+ SG YVLL N+YS+ W++ +++R +N+KG+Q PG
Sbjct: 484 RLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPG 543
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
CS + + GVVHEF+V D SHP ++IY+ L+ + K L+ AGY L ++ EEK
Sbjct: 544 CSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEY 603
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L HSEKLA+AF +++T IRV KNLR+C DCH K++S V RE+I+RD RFH
Sbjct: 604 FLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFH 663
Query: 493 HFREGRCSCNDYW 505
HF EG CSC DYW
Sbjct: 664 HFTEGSCSCRDYW 676
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 169/339 (49%), Gaps = 5/339 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG-GLQIHARVLRD 59
++R + + + ++ MRQ + F F +K C + GL +H+ V++
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ D + T L+ LYS +A K+FDEIP+++ V+W +I YI + +AL LF
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L E G +PD T + +L AC+ +G L G I Y+ E G + + SL+ MY+
Sbjct: 192 RGL--LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYA 249
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGS+ A VF GM EKDVV WSA+I G A NG ++A++ F MQR V PD G
Sbjct: 250 KCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVG 309
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V SACS G ++ G M D L N ++D + G + QA ++ M K
Sbjct: 310 VFSACSRLGALELGNWARGLMDGD-EFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRK 368
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
D ++ ++ + HV V ++++ Q G+
Sbjct: 369 -DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGN 406
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL Q H +LR G D+ L+ L+ F + A +F + P + +N LI
Sbjct: 15 SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIR 74
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG-ALEFGEKIHRYISEHG 163
+ N RDA+ ++ ++ + G PD+ T VL+AC L G +H + + G
Sbjct: 75 GMVSNDAFRDAVSVYASM--RQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ + + L+ +YSK G L A +VF +PEK+VVSW+A+I G +G +A+ F
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
+ G+ PD T +L ACS G + G ++D ++ G + N+ +VD+ +
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASG-RWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLL 309
G +++A ++ M V+ D W L+
Sbjct: 252 GSMEEARRVFDGM-VEKDVVCWSALI 276
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 45/216 (20%)
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS---- 245
VF P ++ ++ +I G+ N RDA+ + +M++ G PD+ TF VL AC+
Sbjct: 57 VFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPH 116
Query: 246 --HCGL----------------VDEGMM-------FLDRMSKDFGILP--NIHHYGCVVD 278
H GL V G++ FL K F +P N+ + ++
Sbjct: 117 YFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIIC 176
Query: 279 LLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+G +A L + MG++PDS +L AC +G+ I+ +E
Sbjct: 177 GYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACS-----RVGDLASGRWIDGYMRE 231
Query: 336 SGDY------VLLLNLYSSVGDWEKVKELREFMNEK 365
SG L+++Y+ G E+ + + + M EK
Sbjct: 232 SGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEK 267
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/502 (41%), Positives = 296/502 (58%), Gaps = 3/502 (0%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y S+ + F M + IP + + AIK +L G QI A ++ G+ D
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ + ++D+Y A +LF EI + D VAW +IS YI N AL ++ +L R
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY-HLMR 1192
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
SG +PD+ T +++A + L ALE G++IH + + Y + SL+ MY KCGS+
Sbjct: 1193 V-SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A+ VF+ M + VV W+AM+ GLA +GH +A+ F MQ G+ PD TF GVLSAC
Sbjct: 1252 QDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
SH GL E + D M K +GI P I HY C+VD LGRAG + +A +I SM K +++
Sbjct: 1312 SHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASM 1371
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
+R LLGACR +RV + L+ L +S YVLL N+Y++ W+ V + R M
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG-YVAEITSELH 423
K ++ PG S I +K VH FVVDD SHP+ + IY+ ++++ K+++ G YV + L
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLL 1491
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ EEK AL YHSEKLAIAFG+++TPP TIRV KNLR+C DCH+ K +S + RE+
Sbjct: 1492 DVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREI 1551
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFHHFR G CSC DYW
Sbjct: 1552 VLRDANRFHHFRNGTCSCGDYW 1573
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 7/264 (2%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G QIHA V++ + + +LM++YS + A K F P+ D ++WN +IS Y +
Sbjct: 913 GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF---GEKIHRYISEHGYG 165
N +A+C F +L R+ G KPD T VL+AC+ E+ G ++H Y + G
Sbjct: 973 NNLEMEAICTFRDLLRD--GLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + +LI +YSK G + A + G + D+ SW+A++ G + R A+E F M
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
G+ D+ T + A + +G + + G ++ V+D+ + G
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGKQ-IQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
+ A +L + +PD W T++
Sbjct: 1150 MPNALELFGEIS-RPDEVAWTTMI 1172
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+F + AWN ++ ++ + A+ F L R G D VT +++L A
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG--HDSVTLVIILSAA 904
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L+ GE+IH + + + + + NSL+ MYSK G + A + F PE D++SW+
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-----LD 258
MIS A N +AI +F + R G+ PD T VL ACS DEG F +
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVH 1021
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
+ GI+ + ++DL + G +D+A L+
Sbjct: 1022 VYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Query: 38 KCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV 97
+ + L G + HAR++ G D L L+ +YS A ++FD+ RD V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 98 AWNVLISCYIR-----NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
WN +++ Y + + + LF L E G +T +L+ C G ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLL--REFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
E +H Y + G+ + + +L+ +Y K G +G A +F MPE+D V W+ M+ N
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 213 GHGRDAIESFGAMQRAGVFPD 233
+A+ F A R+G FPD
Sbjct: 797 SFQDEALRFFSAFHRSGFFPD 817
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + ++ MR + + + + IK +L G QIHA V++
Sbjct: 1171 MISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLD 1230
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y LD + T+L+D+Y +A ++F ++ R V WN ++ ++ +AL LF
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +G +PD VT + VL AC+H G K +G ++ + L+
Sbjct: 1291 TM--QSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALG 1348
Query: 180 KCGSLGMAFEVFKGMPEKDVVS 201
+ G + A V MP K S
Sbjct: 1349 RAGRIQEAENVIASMPFKASAS 1370
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ L+ G++ H I G L N+LI MYSKCGSL A +VF ++D+V+W+++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 206 ISGLAMNGHGR-----DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
++ A + FG ++ G T +L C G V
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
K G ++ G +V++ + GL+ QA L M + D+ +W +L A
Sbjct: 744 VK-IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 275/444 (61%), Gaps = 16/444 (3%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF-------DN 121
T++ Y +A K FD +PQRD V+W +I+ Y ++ +AL +F ++
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
LNR GC L CA + ALE G++IH + GYG+ + N+L+AMY KC
Sbjct: 392 LNRATFGC---------ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
GS+ A + F+G+ EKDVVSW+ M++G A +G GR A+ F +M+ AGV PD+ T GVL
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SACSH GL+D G + M+KD+G++P HY C++DLLGRAG L++A LI +M +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+ W LLGA RIH + LGE+ E + +++ Q SG YVLL NLY++ G W ++R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M + G+Q PG S + ++ +H F V D SHP IY L+E++ +++ GYV+
Sbjct: 623 MRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLV 682
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNR 481
LH++ EEK + L YHSEKLA+AFG+L P G IRV KNLR+C DCH+ K +S + R
Sbjct: 683 LHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGR 742
Query: 482 EVIIRDRLRFHHFREGRCSCNDYW 505
+I+RD RFHHF EG CSC DYW
Sbjct: 743 LIILRDSHRFHHFNEGFCSCGDYW 766
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 57/261 (21%)
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+ GL+D G + M++++ + P HY C++DLLGR L++
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
LLGA RIH + LGE+ + ++ Q SG + ++R+
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMRDV---- 857
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
G+Q PG S ++ +H F V + R E L+E++ +++ E T
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSV-GLFLSRERENIGFLEELDLKMREREEEKERT------ 910
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRV-AKNLRICVDCHNFAKVLSGVYNREVI 484
L Y SE LA A G+L P G RV K + +C DC + K +S + R +
Sbjct: 911 --------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962
Query: 485 IRDRLRFHHFREGRCSCNDYW 505
+RD H F E CSC +YW
Sbjct: 963 LRDS---HRFNESICSCGEYW 980
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 9/238 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S EE +F +++Q N A+ C +L G QIH + ++ G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + L+ +Y EA F+ I ++D V+WN +++ Y R+ R AL +F+
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + +G KPD++T + VL AC+H G L+ G E + ++G +I +
Sbjct: 485 SM--KTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLG 542
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAM--QRAGVF 231
+ G L A ++ + MP + SW A++ ++G+ G A E M Q +G++
Sbjct: 543 RAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMY 600
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 151/379 (39%), Gaps = 68/379 (17%)
Query: 46 LMGGLQIHARVLRDGYQL-------DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
LMGG + + L D L D+ T++ Y+ +A +LFDE P RD
Sbjct: 210 LMGGF-VRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFT 268
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
W ++S Y++N +A FD + + ++V+ ++ ++ I R
Sbjct: 269 WTAMVSGYVQNGMLDEAKTFFDEMPEK------NEVSYNAMIAGYVQTKKMD----IARE 318
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ E ++ N++I Y + G + A + F MP++D VSW+A+I+G A +GH +A
Sbjct: 319 LFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACS--------------------------------- 245
+ F +++ G + TF LS C+
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438
Query: 246 --HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CG +DE + + + + N G GR L ++ + + GVKPD
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQAL--TVFESMKTAGVKPDEI 496
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQ-----ESGDYVLLLNLYSSVGDWEKVKEL 358
+L AC H L +R E+ + S Y +++L G E+ ++L
Sbjct: 497 TMVGVLSAC---SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553
Query: 359 REFMNEKGLQTTPGCSTIG 377
+ + PG ++ G
Sbjct: 554 I-----RNMPFQPGAASWG 567
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +LFD +P++D V+WN L+S Y +N +A +FDN+ + S ++ +L A
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNS------ISWNGLLAA 182
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
H G +E E + S+ + + N L+ + + LG A +F MP +D +SW
Sbjct: 183 YVHNGRIE--EACLLFESKSDW--DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISW 238
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MISG A G A F VF T+T ++S G++DE F D M +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVF----TWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
N Y ++ + +D A +L SM + S+ W T++
Sbjct: 295 -----KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS-WNTMI 335
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 54/282 (19%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+ +P+R +V++N +IS Y+RN + A LFD + +
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERD----------------- 110
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ N ++ Y + LG A +F MPEKDVVSW+
Sbjct: 111 ------------------------LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWN 146
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+++SG A NG+ +A E F M + ++ G+L+A H G ++E + + S D
Sbjct: 147 SLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYVHNGRIEEACLLFESKS-D 201
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ ++ + C++ R L A L M V+ D+ W T++ ++ R
Sbjct: 202 WDLIS----WNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISGYAQGGGLSQARR 256
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ + E ++ + +++ Y G ++ K + M EK
Sbjct: 257 LFD---ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 275/444 (61%), Gaps = 16/444 (3%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF-------DN 121
T++ Y +A K FD +PQRD V+W +I+ Y ++ +AL +F ++
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
LNR GC L CA + ALE G++IH + GYG+ + N+L+AMY KC
Sbjct: 392 LNRATFGC---------ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
GS+ A + F+G+ EKDVVSW+ M++G A +G GR A+ F +M+ AGV PD+ T GVL
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SACSH GL+D G + M+KD+G++P HY C++DLLGRAG L++A LI +M +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+ W LLGA RIH + LGE+ E + +++ Q SG YVLL NLY++ G W ++R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M + G+Q PG S + ++ +H F V D SHP IY L+E++ +++ GYV+
Sbjct: 623 MRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLV 682
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNR 481
LH++ EEK + L YHSEKLA+AFG+L P G IRV KNLR+C DCH+ K +S + R
Sbjct: 683 LHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGR 742
Query: 482 EVIIRDRLRFHHFREGRCSCNDYW 505
+I+RD RFHHF EG CSC DYW
Sbjct: 743 LIILRDSHRFHHFNEGFCSCGDYW 766
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 9/238 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S EE +F +++Q N A+ C +L G QIH + ++ G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + L+ +Y EA F+ I ++D V+WN +++ Y R+ R AL +F+
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + +G KPD++T + VL AC+H G L+ G E + ++G +I +
Sbjct: 485 SM--KTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLG 542
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAM--QRAGVF 231
+ G L A ++ + MP + SW A++ ++G+ G A E M Q +G++
Sbjct: 543 RAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMY 600
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 151/379 (39%), Gaps = 68/379 (17%)
Query: 46 LMGGLQIHARVLRDGYQL-------DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
LMGG + + L D L D+ T++ Y+ +A +LFDE P RD
Sbjct: 210 LMGGF-VRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFT 268
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
W ++S Y++N +A FD + + ++V+ ++ ++ I R
Sbjct: 269 WTAMVSGYVQNGMLDEAKTFFDEMPEK------NEVSYNAMIAGYVQTKKMD----IARE 318
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ E ++ N++I Y + G + A + F MP++D VSW+A+I+G A +GH +A
Sbjct: 319 LFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACS--------------------------------- 245
+ F +++ G + TF LS C+
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438
Query: 246 --HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CG +DE + + + + N G GR L ++ + + GVKPD
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQAL--TVFESMKTAGVKPDEI 496
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQ-----ESGDYVLLLNLYSSVGDWEKVKEL 358
+L AC H L +R E+ + S Y +++L G E+ ++L
Sbjct: 497 TMVGVLSAC---SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553
Query: 359 REFMNEKGLQTTPGCSTIG 377
+ + PG ++ G
Sbjct: 554 I-----RNMPFQPGAASWG 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +LFD +P++D V+WN L+S Y +N +A +FDN+ + S ++ +L A
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNS------ISWNGLLAA 182
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
H G +E E + S+ + + N L+ + + LG A +F MP +D +SW
Sbjct: 183 YVHNGRIE--EACLLFESKSDW--DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISW 238
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MISG A G A F VF T+T ++S G++DE F D M +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVF----TWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
N Y ++ + +D A +L SM + S+ W T++
Sbjct: 295 -----KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS-WNTMI 335
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 54/282 (19%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+ +P+R +V++N +IS Y+RN + A LFD + +
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERD----------------- 110
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ N ++ Y + LG A +F MPEKDVVSW+
Sbjct: 111 ------------------------LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWN 146
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+++SG A NG+ +A E F M + ++ G+L+A H G ++E + + S D
Sbjct: 147 SLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYVHNGRIEEACLLFESKS-D 201
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ ++ + C++ R L A L M V+ D+ W T++ ++ R
Sbjct: 202 WDLIS----WNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISGYAQGGGLSQARR 256
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ + E ++ + +++ Y G ++ K + M EK
Sbjct: 257 LFD---ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 283/437 (64%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ K EA LFD++P+RD V+W +I+ Y ++ + +AL LF + RE G
Sbjct: 342 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMERE--G 399
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ + + L CA + ALE G+++H + + GY + + N+L+ MY KCGS+ A
Sbjct: 400 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 459
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
++FK M KD+VSW+ MI+G + +G G +A+ F +M+R G+ PDD T VLSACSH G
Sbjct: 460 DLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTG 519
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LVD+G + M++D+G+ PN HY C+VDLLGRAGLL++A+ L+ +M +PD+ IW TL
Sbjct: 520 LVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTL 579
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA R+H + L E + + ++ + SG YVLL NLY+S G W V +LR M +KG++
Sbjct: 580 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 639
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I ++ H F V D HP +EI+ L++++ ++K AGYV++ + LH++ E
Sbjct: 640 KVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEE 699
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + YHSE+LA+A+G++ G IRV KNLR+C DCHN K ++ V R +I+RD
Sbjct: 700 EKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDN 759
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF++G CSC DYW
Sbjct: 760 NRFHHFKDGSCSCGDYW 776
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS S E LF M ++ N + S A+ C +L G Q+H R+++ G
Sbjct: 375 MIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + L+ +Y EA LF E+ +D V+WN +I+ Y R+ +AL F+
Sbjct: 435 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFE 494
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
++ RE G KPDD T + VL AC+H G ++ G + H ++G ++ +
Sbjct: 495 SMKRE--GLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLG 552
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A + K MP E D W ++ ++G+
Sbjct: 553 RAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGN 588
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 31/300 (10%)
Query: 46 LMGGLQ-----IHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
L+GG + AR D ++ D T++ Y+ + EA +LFDE P D W
Sbjct: 220 LLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTW 279
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
++S YI+N+ +A LFD + ++V+ +L +E +++ +
Sbjct: 280 TAMVSGYIQNRMVEEARELFDRMPER------NEVSWNAMLAGYVQGERVEMAKELFDVM 333
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
++ N++I Y++CG + A +F MP++D VSW+AMI+G + +GH +A+
Sbjct: 334 P----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEAL 389
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD- 278
F M+R G + +F+ LS C+ ++ G R+ K + GC V
Sbjct: 390 RLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK------GGYETGCFVGN 443
Query: 279 ----LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
+ + G +++A L M K D W T++ H GE + +K +
Sbjct: 444 ALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRH---GFGEEALRFFESMKRE 499
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 48/258 (18%)
Query: 82 FEACK-LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE-------------ES 127
FE + LFDE+P+RD V+WNV+I Y+RN+ A LF+ + ++
Sbjct: 106 FELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQN 165
Query: 128 GCKPD------------DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC---- 171
GC D DV+ +L A LE + +GS+ N
Sbjct: 166 GCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVL--------FGSRENWALVSW 217
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N L+ + K + A + F M +DVVSW+ +I+G A NG +A + F VF
Sbjct: 218 NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVF 277
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
T+T ++S +V+E DRM + + N G V + ++ A +
Sbjct: 278 ----TWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYV-----QGERVEMAKE 328
Query: 292 LITSMGVKPDSTIWRTLL 309
L M + ST W T++
Sbjct: 329 LFDVMPCRNVST-WNTMI 345
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D WNV IS Y+R R +AL +F + R S V+ ++ G E
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSS------VSYNAMISGYLRNGEFELARM 111
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+ + E S N +I Y + +LG A E+F+ MPE+DV SW+ ++SG A NG
Sbjct: 112 LFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN--IHH 272
DA F M +D ++ +LSA ++E + FG N +
Sbjct: 168 VDDARRVFDRMPE----KNDVSWNALLSAYVQNSKLEEACVL-------FGSRENWALVS 216
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ C++ + + +A Q SM V+ D W T++
Sbjct: 217 WNCLLGGFVKKKKIVEARQFFDSMKVR-DVVSWNTII 252
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 35/373 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M++ Y + + + LFE+M ++ + N +A C+ RV
Sbjct: 127 MIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDAR---------RVFDR 177
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + L+ Y K EAC LF V+WN L+ +++ ++ +A F
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFF 237
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
D++ D V+ ++ A G ++ ++ H + ++++ Y
Sbjct: 238 DSMKVR------DVVSWNTIITGYAQNGEIDEARQLFDESPVH----DVFTWTAMVSGYI 287
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+ + A E+F MPE++ VSW+AM++G A E F M V T+
Sbjct: 288 QNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV----STWNT 343
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM--- 296
+++ + CG + E D+M K + + ++ ++G +A +L M
Sbjct: 344 MITGYAQCGKISEAKNLFDKMPKRDPV-----SWAAMIAGYSQSGHSYEALRLFVLMERE 398
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGDWEK 354
G + + + + + L C + LG+++ L++ E+G +V LL +Y G E+
Sbjct: 399 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVK-GGYETGCFVGNALLLMYCKCGSIEE 457
Query: 355 VKELREFMNEKGL 367
+L + M K +
Sbjct: 458 ANDLFKEMAGKDI 470
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE F F KM + + + A+ C L G +H +
Sbjct: 315 MIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKK 374
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D +M +L+ +YS ++ A +F + + V WN +I Y +N +AL LF
Sbjct: 375 IGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFC 434
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD T + V+ A A L + IH + +C +LI ++K
Sbjct: 435 EMQSHD--IKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAK 492
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A ++F M E+ V++W+AMI G NGHGR+A++ F MQ V P++ TF V
Sbjct: 493 CGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSV 552
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
++ACSH GLV+EGM + + M +++G+ P + HYG +VDLLGRAG LD A++ I M VKP
Sbjct: 553 IAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKP 612
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
T+ +LGACRIHK+V LGE+ + L +L + G +VLL N+Y+S W+KV +R
Sbjct: 613 GITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRT 672
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KG+Q TPGCS + L+ VH F +HP+ IY L+ + ++K AGYV + T+
Sbjct: 673 AMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPD-TN 731
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H++ + K LS HSE+LAIAFG+L T GT I + KNLR+C DCH K +S V
Sbjct: 732 SIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTG 791
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 792 REIIVRDLRRFHHFKNGICSCGDYW 816
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 142/253 (56%), Gaps = 2/253 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ +S+ + +E+MR + + ++ ++ + L G +IH V+ +G
Sbjct: 113 MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNG 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q + MT +++LY+ + +A K+F+ +PQRD V+WN +++ Y +N R A+ +
Sbjct: 173 FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVV- 231
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +E+G KPD +T + VL A A L AL G IH Y G+ +N+ +++ Y K
Sbjct: 232 -LQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VFKGM ++VVSW+ MI G A NG +A +F M GV P + + G
Sbjct: 291 CGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGA 350
Query: 241 LSACSHCGLVDEG 253
L AC++ G ++ G
Sbjct: 351 LHACANLGDLERG 363
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 23/227 (10%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
++L+ C L L +I I ++G+ ++ LI+++ K S+ A VF+ + K
Sbjct: 49 ILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHK 105
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC-----GLVDE 252
V + M+ G A N RDA+ + M+ V P FT +L G
Sbjct: 106 LDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
GM+ + G N+ VV+L + ++ AY++ M + D W T++
Sbjct: 166 GMVITN------GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQR-DLVSWNTVVAG- 217
Query: 313 RIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYSSVGDWEKVK 356
+ R ++ + L+ QE+G D + L+++ +V D + ++
Sbjct: 218 --YAQNGFARRAVQ--VVLQMQEAGQKPDSITLVSVLPAVADLKALR 260
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 292/487 (59%), Gaps = 19/487 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+ + SFA+K + LQ+HA +LR G D +L+TTL+D Y+ A K+F
Sbjct: 117 DALSLSFALKASARCSDGTATLQLHALLLRLGCTPDVRLITTLVDSYAKCGDLASARKVF 176
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------NREESGCKPDDVTCLLVL 140
DE+ RD +WN L++ + AL LF L REE P++VT + L
Sbjct: 177 DEMVVRDVASWNALLAGLAQGTEPTLALALFHRLVGSFRELPPREE----PNEVTIVAAL 232
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD-- 198
ACA +G+L+ G +H + + G + +CN+LI MYSKCGSL +A EVF + +D
Sbjct: 233 SACAQIGSLQDGLYVHEFARKIGVNGNVRVCNALIDMYSKCGSLDLALEVFHSIKREDRT 292
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+VS++ I ++M+GHG DA+ F M + PD+ T+ VL C+H GLVD+G+
Sbjct: 293 LVSYNTAIQAVSMHGHGGDALRLFDEMP-TFIEPDEVTYIAVLCGCNHAGLVDDGLRVFH 351
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M +LPN+ HYG VVDLLGRAG L +AY I SM D +W+TLLGA + H V
Sbjct: 352 SMR----VLPNVKHYGAVVDLLGRAGRLAEAYDTIVSMPFPADIVLWQTLLGAAKTHGDV 407
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L E L EL + GDYVLL N+Y+S W V+ +R+ M ++ PG S +
Sbjct: 408 ELAELAATKLDELGSNVDGDYVLLSNVYASKARWADVRRVRDTMRSNDVRKVPGFSYTEI 467
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
GV+H+F+ D HPR EIY+ L+EI ++ GY E ++ LH++G EEK ALSYHS
Sbjct: 468 SGVMHKFINGDKEHPRWQEIYRALEEIVSRIGELGYEPETSNVLHDIGEEEKQYALSYHS 527
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLAIAFG++ATPPG T+RV KNLR C DCH AK++S Y R +IIRDR RFH F +G+
Sbjct: 528 EKLAIAFGLIATPPGETLRVIKNLRTCGDCHVVAKLISKAYGRVIIIRDRARFHQFEDGQ 587
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 588 CSCKDYW 594
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/513 (40%), Positives = 304/513 (59%), Gaps = 9/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLM--GGL--QIHA 54
M+R Y ++ + + LF+ + + F S + + CS + GL IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC--KLFDEIPQRDTVAWNVLISCYIRNQRT 112
V++ G+ + TL+D Y+ + A K+FD+I +D V++N ++S Y ++ +
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+A +F L + + + +T VL A +H GAL G+ IH + G + +
Sbjct: 268 NEAFEVFRRLVKNKV-VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
S+I MY KCG + A + F M K+V SW+AMI+G M+GH A+E F AM +GV P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF VL+ACSH GL EG + + M FG+ P + HYGC+VDLLGRAG L +AY L
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I M +KPDS IW +LL ACRIHK+V L E + L EL + G Y+LL ++Y+ G W
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+ V+ +R M +GL PG S + L G VH F++ D HP+ +IY+ L E+N++L A
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV+ +S H++ EEK L HSEKLAIAFG++ T PG+T+ V KNLR+C DCHN
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + +RE ++RD RFHHF++G CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 162/332 (48%), Gaps = 13/332 (3%)
Query: 8 SSSPEEGFYLFEKMRQKRI-PT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
S E F MR+ + PT + F C AIK C + G Q H + GYQ D
Sbjct: 54 SGDSAEALLAFSSMRKLSLYPTRSSFPC--AIKACSSLFDIFSGKQTHQQAFVFGYQSDI 111
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--- 122
+ + L+ +YST K +A K+FDEIP+R+ V+W +I Y N DA+ LF +L
Sbjct: 112 FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVD 171
Query: 123 -NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
N ++ D + + V+ AC+ + A E IH ++ + G+ +++ N+L+ Y+K
Sbjct: 172 ENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKG 231
Query: 182 GSLGMAF--EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-TFT 238
G G+A ++F + +KD VS+++++S A +G +A E F + + V + T +
Sbjct: 232 GEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLS 291
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL A SH G + G D++ + G+ ++ ++D+ + G ++ A + M
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
K + W ++ +H H + +I+
Sbjct: 351 KNVRS-WTAMIAGYGMHGHAAKALELFPAMID 381
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+ + DV SW+++I+ LA +G +A+ +F +M++ ++P +F + ACS
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS 87
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 297/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ E L+ M + + + F +K C L G ++H RV
Sbjct: 134 LIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTR 193
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + ++D+Y+ +A +FD I RD V WN +I+ Y +N R +AL L
Sbjct: 194 WGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCR 253
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ +G P T + + A A AL G ++H + G+G + L SL+ MY+K
Sbjct: 254 DM--AANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAK 311
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTG 239
G + +A +F+ + ++++VSW+AMI G M+GH +A+ F M+ A V PD+ TF G
Sbjct: 312 SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVG 371
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC+H G+V+E F M + I P + HY CV+D+LG G ++AY LI M ++
Sbjct: 372 VLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIE 431
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PDS IW LL C+IHK+V LGE ++ LIEL+ +++G+YV L N+Y+ G WEK +R
Sbjct: 432 PDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVR 491
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M +GL+ CS I LKG H F+V D SHPR +EIY L+ + + AGYV +I
Sbjct: 492 KLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDII 551
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
HN+ +EK N + HSE+LAIAFG+++TPPGT + V KNLR+C DCH K++S +
Sbjct: 552 PVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIV 611
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD R+HHF G CSC DYW
Sbjct: 612 QREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 165/343 (48%), Gaps = 10/343 (2%)
Query: 23 QKRIPTNPFAC---SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
R+ ++P A + ++ C+ SL G Q+H R+L G D+ L T L+DLY+
Sbjct: 52 NPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACG 111
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
+ A +LFD +P+R+ WNVLI Y R A+ L+ + E G +PD+ T LV
Sbjct: 112 QVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGM--VEHGVEPDNFTYPLV 169
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L+ACA L LE G ++H+ +S +G + +C ++ MY+KCG + A VF G+ +D
Sbjct: 170 LKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDA 229
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD- 258
V W++MI+ NG +A+ M G+ P T +SA + + G
Sbjct: 230 VVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGF 289
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ FG+ + +VD+ ++G + A L + +K + W ++ +H H
Sbjct: 290 GWRRGFGLQDKLK--TSLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHA 346
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+ + + AQ + D + + + S+ V+E +EF
Sbjct: 347 DEALALFNKM-KGDAQVTPDNITFVGVLSACNHGGMVEEAKEF 388
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 282/437 (64%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ K EA LFD++P+RD V+W +I+ Y ++ + +AL LF + RE G
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE--G 404
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ + + L CA + ALE G+++H + + GY + + N+L+ MY KCGS+ A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
++FK M KD+VSW+ MI+G + +G G A+ F +M+R G+ PDD T VLSACSH G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LVD+G + M++D+G++PN HY C+VDLLGRAGLL+ A+ L+ +M +PD+ IW TL
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA R+H + L E + + ++ + SG YVLL NLY+S G W V +LR M +KG++
Sbjct: 585 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I ++ H F V D HP +EI+ L+E++ ++K AGYV++ + LH++ E
Sbjct: 645 KVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEE 704
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + YHSE+LA+A+G++ G IRV KNLR+C DCHN K ++ + R +I+RD
Sbjct: 705 EKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDN 764
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF++G CSC DYW
Sbjct: 765 NRFHHFKDGSCSCGDYW 781
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 45/356 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAI-----KCCMKFCS--------- 45
M+ Y+ + ++ +F++M +K + N ++ + CM F S
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 46 --LMGGLQ-----IHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV 97
L+GG + AR D + D T++ Y+ K EA +LFDE P +D
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
W ++S YI+N+ +A LFD + ++V+ +L +E +++
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPER------NEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+ ++ N++I Y++CG + A +F MP++D VSW+AMI+G + +GH +
Sbjct: 337 VMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+ F M+R G + +F+ LS C+ ++ G R+ K + GC V
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK------GGYETGCFV 446
Query: 278 D-----LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ + G +++A L M K D W T++ H + R E +
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESM 501
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D WNV IS Y+R R +AL +F + R S V+ ++ G E K
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS------VSYNGMISGYLRNGEFELARK 116
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+ + E S N +I Y + +LG A E+F+ MPE+DV SW+ M+SG A NG
Sbjct: 117 LFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG-MMFLDRMSKDFGILPNIHHY 273
DA F M +D ++ +LSA ++E M+F R +++ ++ +
Sbjct: 173 VDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSR--ENWALVS----W 222
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
C++ + + +A Q SM V+ D W T++
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTII 257
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 39/251 (15%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE-------------ESGCK 130
A KLFDE+P+RD V+WNV+I Y+RN+ A LF+ + ++GC
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 131 PD------------DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
D DV+ +L A +E E + S + + N L+ +
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKME--EACMLFKSRENWA--LVSWNCLLGGF 229
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
K + A + F M +DVVSW+ +I+G A +G +A + F VF T+T
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF----TWT 285
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
++S +V+E D+M + + N G V + ++ A +L M
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV-----QGERMEMAKELFDVMPC 340
Query: 299 KPDSTIWRTLL 309
+ ST W T++
Sbjct: 341 RNVST-WNTMI 350
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/513 (40%), Positives = 304/513 (59%), Gaps = 9/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCCMKFCSLM--GGL--QIHA 54
M+R Y ++ + + LF+ + + F S + + CS + GL IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC--KLFDEIPQRDTVAWNVLISCYIRNQRT 112
V++ G+ + TL+D Y+ + A K+FD+I +D V++N ++S Y ++ +
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+A +F L + + + +T VL A +H GAL G+ IH + G + +
Sbjct: 268 NEAFEVFRRLVKNKV-VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
S+I MY KCG + A + F M K+V SW+AMI+G M+GH A+E F AM +GV P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF VL+ACSH GL EG + + M FG+ P + HYGC+VDLLGRAG L +AY L
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I M +KPDS IW +LL ACRIHK+V L E + L EL + G Y+LL ++Y+ G W
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+ V+ +R M +GL PG S + L G VH F++ D HP+ +IY+ L E+N++L A
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV+ +S H++ EEK L HSEKLAIAFG++ T PG+T+ V KNLR+C DCHN
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + +RE ++RD RFHHF++G CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 13/332 (3%)
Query: 8 SSSPEEGFYLFEKMRQKRI-PT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
S E F MR+ + PT + F C AIK C + G Q H + GYQ D
Sbjct: 54 SGDSAEALLAFSSMRKLSLYPTRSSFPC--AIKACSSLFDIFSGKQTHQQAFVFGYQSDI 111
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--- 122
+ + L+ +YST K +A K+FDEIP+RD V+W +I Y N DA+ LF +L
Sbjct: 112 FVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVD 171
Query: 123 -NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
N ++ D + + V+ AC+ + A E IH ++ + G+ +++ N+L+ Y+K
Sbjct: 172 ENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKG 231
Query: 182 GSLGMAF--EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-TFT 238
G G+A ++F + +KD VS+++++S A +G +A E F + + V + T +
Sbjct: 232 GEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLS 291
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL A SH G + G D++ + G+ ++ ++D+ + G ++ A + M
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
K + W ++ +H H + +I+
Sbjct: 351 KNVRS-WTAMIAGYGMHGHAAKALELFPAMID 381
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ + DV SW+++I+ LA +G +A+ +F +M++ ++P +F + ACS + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + FG +I ++ + G L+ A ++ + K D W +++
Sbjct: 96 KQ-THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KRDIVSWTSMI 149
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/532 (38%), Positives = 299/532 (56%), Gaps = 34/532 (6%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y+ E + ++M Q+ + AI + L G H V+R+G +
Sbjct: 308 YARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGW 367
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFD-------------------------------EIPQ 93
+ ++D+Y K AC++FD +IP+
Sbjct: 368 DSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPE 427
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
R+ V WN +IS ++ DA+ LF + E G K D VT + + AC +LGA E +
Sbjct: 428 RNAVFWNTMISGLVQKSLFEDAIELFREMQGE--GIKADRVTMMGIASACGYLGAPELAK 485
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+H YI ++G M L +L+ M+++CG A +VF M E+DV +W+A I +AM G
Sbjct: 486 WVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEG 545
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
+G A F M GV PD F VL+ACSH G V++G+ M +D GI P I HY
Sbjct: 546 NGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHY 604
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
GC+VDLLGRAGLL +A+ LI SM ++P+ +W +LL ACR+HK+V + E + EL
Sbjct: 605 GCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAP 664
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
Q +G +VLL N+Y+S G W V +R + EKG++ PG S++ + GV+HEF D SHP
Sbjct: 665 QRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHP 724
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
+ I ML E+N + AG++ ++++ L ++ +EK LS HSEKLAIAFG++AT
Sbjct: 725 EMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRS 784
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IRV KNLR+C DCH+FAK+ S +YNRE+I+RD RFH FR+G CSC DYW
Sbjct: 785 MPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 150/341 (43%), Gaps = 35/341 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ P+E LF +M + I + I C K L G ++ A + G
Sbjct: 203 LICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELG 262
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L+ ++ L+D+Y A +LFDE R+ V +N ++S Y R R+AL + D
Sbjct: 263 LKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILD 322
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ G +PD VT L + A A L L +G+ H Y+ +G ++ N +I MY K
Sbjct: 323 EMLQQ--GPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMK 380
Query: 181 CGSLGM-------------------------------AFEVFKGMPEKDVVSWSAMISGL 209
CG M A+EVF +PE++ V W+ MISGL
Sbjct: 381 CGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGL 440
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
DAIE F MQ G+ D T G+ SAC + G + + K+ GI +
Sbjct: 441 VQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKN-GIPCD 499
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ +VD+ R G A Q+ M + D + W +G
Sbjct: 500 MRLNTALVDMFARCGDPQSAMQVFNKM-TERDVSAWTAAIG 539
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 4/251 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS + E L+ +M + N + F + C K + G+Q+H V++ G
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ Y+ K+F+ + +R+ V+W LI Y R R ++A+ LF
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF- 220
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
E+G +P VT + V+ ACA L L+ GE++ YI E G + N+L+ MY K
Sbjct: 221 -FEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A +F ++++V ++ ++S A G R+A+ M + G PD T
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339
Query: 241 LSACSHCGLVD 251
+SA + LVD
Sbjct: 340 ISASAQ--LVD 348
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS------TFEKSFEACKLFD 89
+++CC L Q+H ++ ++G +T L++ + + + + +A +LF
Sbjct: 31 SLRCCKTLNQLK---QLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFK 87
Query: 90 EIPQRDTVAW--NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
E + D + N LI Y R+A+ L+ + G P+ T VL C +
Sbjct: 88 EDVRSDDALFMLNSLIRGYSSAGLGREAILLY--VRMLVLGVTPNHYTFPFVLSGCTKIA 145
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
A G ++H + + G + + N LI Y++CG + +VF+GM E++VVSW+++I
Sbjct: 146 AFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLIC 205
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
G A ++A+ F M AG+ P T V+SAC+ +D G + + G+
Sbjct: 206 GYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG-ELGLK 264
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQL 292
N +VD+ + G +D A +L
Sbjct: 265 LNKVMVNALVDMYMKCGAIDAAKRL 289
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ S E+ LF +M+ + I + C + +H + ++G
Sbjct: 436 MISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNG 495
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D +L T L+D+++ A ++F+++ +RD AW I A LF+
Sbjct: 496 IPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFN 555
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KPD V + VL AC+H G +E G I + +HG ++ ++ + +
Sbjct: 556 QMLIQ--GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGR 613
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISG------LAMNGHGRDAIESFGAMQRAGV 230
G L AF++ K MP E + V W ++++ + M + + I A QRAGV
Sbjct: 614 AGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINEL-APQRAGV 669
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/494 (36%), Positives = 293/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE + +M + + F S + + + G +IH +R G D + ++L
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + ++C++F + +RD ++WN +I+ ++N + L F + + KP
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK--IKP 338
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ ++ ACAHL L G+++H YI+ +G+ + + +SL+ MY+KCG++ A ++F
Sbjct: 339 KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIF 398
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M +D+VSW+AMI G A++G DAIE F M+ G+ P+ F VL+ACSH GLVD
Sbjct: 399 DRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVD 458
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M++DFGI P + HY V DLLGRAG L++AY I M + P +IW TLL A
Sbjct: 459 EAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA 518
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H ++ + E+V ++E+ +G Y+LL N+YS+ W++ + R M G++ TP
Sbjct: 519 CRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTP 578
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
CS I +K V+ F+ D SHP +I + ++ + + ++ GYV + + H++ E+K
Sbjct: 579 ACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKK 638
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ HSE+LAI FG++ TP G TIRV KNLR+C DCH K +S + RE+++RD RF
Sbjct: 639 YLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRF 698
Query: 492 HHFREGRCSCNDYW 505
HHF+ G CSC DYW
Sbjct: 699 HHFKNGTCSCGDYW 712
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 147/349 (42%), Gaps = 40/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ P + F M + + +K C L G +H ++R G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 61 YQLDSQLMTTLMDLYS-----------------TFEKSFEAC---------------KLF 88
D LM++YS F++ E K+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC--KPDDVTCLLVLQACAHL 146
+ +P++D V+WN +I+ RN + L + RE G KPD T VL A
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMI----REMGGANLKPDSFTLSSVLPLIAEN 252
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G++IH G + + + +SLI MY+KC + + VF + E+D +SW+++I
Sbjct: 253 VDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSII 312
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+G NG + + F M A + P +F+ ++ AC+H + G ++++ G
Sbjct: 313 AGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GF 371
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
NI +VD+ + G + A Q+ M ++ D W ++ C +H
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALH 419
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 39/295 (13%)
Query: 51 QIHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+HA+VL+ +Q ++ L+ +YS ++ +LF+ I +AW +I CY +
Sbjct: 27 QLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+L F + SG PD VL++CA L L GE +H YI G +
Sbjct: 85 GLPHQSLGSF--IGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLY 142
Query: 170 LCNSLIAMYSKCGSL----------GMAFE----------------------VFKGMPEK 197
N+L+ MYSK L G F+ +F+ MPEK
Sbjct: 143 TGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEK 202
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
D+VSW+ +I+G A NG + + M A + PD T + VL + + G +
Sbjct: 203 DLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE-I 261
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
S G+ +I+ ++D+ + + + ++ T + + D W +++ C
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL-TERDGISWNSIIAGC 315
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/493 (40%), Positives = 288/493 (58%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E YLF +M+ + + + F S +K C + G QIHA++ + Q D + L+
Sbjct: 233 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALV 292
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+LYS + K F P+ D V+W LI +++N + L LF L SG KPD
Sbjct: 293 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF--SGRKPD 350
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ T ++L ACA+L A++ GE+IH Y + G G+ + NS I MY+KCG + A FK
Sbjct: 351 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 410
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
D+VSWS MIS A +G ++A++ F M+ +G+ P+ TF GVL ACSH GLV+E
Sbjct: 411 ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEE 470
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G+ + + M KD GI PN+ H C+VDLLGRAG L +A I G + D +WR+LL AC
Sbjct: 471 GLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 530
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+HK G+RV E +IEL+ + + YVLL N+Y+ G E+R M ++G++ PG
Sbjct: 531 RVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPG 590
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I + VVH FV D SHP IY L+E+ +++K Y+ E + + +
Sbjct: 591 LSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNS 650
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
+SYHSEKLA+ FG+++ P +RV KNLR C CH K+ S + NRE+I+RD +RFH
Sbjct: 651 MVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFH 710
Query: 493 HFREGRCSCNDYW 505
FR+G CSC DYW
Sbjct: 711 RFRDGSCSCGDYW 723
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 14/251 (5%)
Query: 7 MSSSPEEGFY-----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+S + GFY LF++ R + + F S A+ C + L G IHA + G
Sbjct: 13 ISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGL 72
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
L +L+D+Y + A +F+ + D+V+WN LI+ Y+R + L L
Sbjct: 73 GGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVK 132
Query: 122 LNREESGCKPDDVTCLLVLQACAH--LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G + L+AC ++E G+ +H + G + + +L+ Y+
Sbjct: 133 MLRH--GLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA 190
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM-----NGHGRDAIESFGAMQRAGVFPDD 234
K G L A ++FK MP+ +VV ++AMI+G + +A+ F MQ G+ P +
Sbjct: 191 KIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSE 250
Query: 235 QTFTGVLSACS 245
TF+ +L ACS
Sbjct: 251 FTFSSILKACS 261
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 124/310 (40%), Gaps = 55/310 (17%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+P+R+ V+WN LIS Y + + + LF S + D T L C L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM--SDLRLDKFTFSNALSVCGRTLDLR 58
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G IH I+ G G + L NSLI MY KCG + A VF+ E D VSW+++I+G
Sbjct: 59 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 118
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-------HCGLVDEGMMF------- 256
G + + M R G+ + L AC CG + G
Sbjct: 119 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 178
Query: 257 ----------------LDRMSKDFGIL--PNIHHYGCVVDLLGRAGLL----------DQ 288
L+ +K F ++ PN+ Y ++ AG L ++
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI-----AGFLQMETMADEFANE 233
Query: 289 AYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLL 343
A L M G+KP + ++L AC + G+++ + + Q S +++ L+
Sbjct: 234 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ-SDEFIGNALV 292
Query: 344 NLYSSVGDWE 353
LYS G E
Sbjct: 293 ELYSLSGSIE 302
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E G LF ++ + F S + C ++ G QIHA ++ G + + +
Sbjct: 333 EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQ 392
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ A F E D V+W+V+IS ++ ++A+ LF+ + + SG P
Sbjct: 393 ICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM--KGSGIAP 450
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMA--F 188
+ +T L VL AC+H G +E G + + +HG + ++ + + G L A F
Sbjct: 451 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF 510
Query: 189 EVFKGMPEKDVVSWSAMISG 208
+ G E D V W +++S
Sbjct: 511 IMDSGF-EGDPVMWRSLLSA 529
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/453 (43%), Positives = 284/453 (62%), Gaps = 3/453 (0%)
Query: 54 ARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
AR + DG + D T++ Y+ + A ++FD RD +W+ +IS Y +++R+
Sbjct: 42 ARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRS 101
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
++AL L+ ++ + PD +T + V+ AC+ LGAL G ++HR++ + + L
Sbjct: 102 KEALELWREMH--AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGT 159
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+LI MY+KCG + A VF MPEKDV +WS+MI GLA +G G +++ F M G+ P
Sbjct: 160 ALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKP 219
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF GVL AC+H GLV EG + M++ GI P + HYGC+VDLLGR+G +++A QL
Sbjct: 220 NGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQL 279
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I SM +PD+ IWR LLGACRIHK+V + E + L L G YVLL N+Y+ W
Sbjct: 280 IRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSW 339
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
E V E+R+ + +Q PG S+I +HEFV D HPR EIY++L+E+ +LK A
Sbjct: 340 EGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQA 399
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GY L ++ + K +L+ HSEKLAIAF +L TP +TIR+ KNLR C DCH+
Sbjct: 400 GYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAM 459
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S VY+R++I+RDR RFHHF EG+CSC DYW
Sbjct: 460 KLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ S +E L+ +M I + + C +L G ++H V +
Sbjct: 91 MISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNR 150
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD +L T L+D+Y+ A ++FD +P++D W+ +I + ++L LF
Sbjct: 151 IELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFS 210
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G KP+ VT + VL AC H+G + G+K R ++E HG + ++ +
Sbjct: 211 KMISE--GMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLG 268
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ G + A ++ + M E D + W A++ ++ + A E+ ++
Sbjct: 269 RSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLR 316
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 33/171 (19%)
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG---------------- 213
LCN ++A Y + A +VF GMP +D+VSW+ MI G AM G
Sbjct: 25 LCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRD 84
Query: 214 ---------------HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
++A+E + M A + PD T V+SACS G + G +
Sbjct: 85 AFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE-VH 143
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
R + I ++ ++D+ + G ++ A ++ M K D W +++
Sbjct: 144 RFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEK-DVQTWSSMI 193
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 300/508 (59%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT---NPFACSFAIKCCMKFCSLMGGLQIHARVL 57
+V A++ P ++ +M ++ N F S A+ G ++H V+
Sbjct: 130 IVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVV 189
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R G D+ + + L D+Y+ + +A +FD +P RD V+W ++ Y +R +
Sbjct: 190 RRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFR 249
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + R SG +P++ T VL+ACA + + G+++H +++ G ++L+ M
Sbjct: 250 LFVRMLR--SGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHM 307
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YSK G +G A VF+GMP+ D+VSW+AMISG A NG +A+ F + R+G PD TF
Sbjct: 308 YSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTF 367
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVLSAC+H GLVD+G+ + ++GI HY CV+DLL R+GL ++A ++I +M
Sbjct: 368 VGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMS 427
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
VKP+ +W +LLG CRIHK+V L E L E++ + YV L N+Y+SVG +++V+
Sbjct: 428 VKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVEN 487
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
R M KG+ P S I + +H F+V D HP+ ++Y +L ++ +++ GYVA+
Sbjct: 488 TRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVAD 547
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
LH++ E+K + YHSE+LA+AFG++ATP G I+V KNLRIC DCH K++S
Sbjct: 548 TGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISK 607
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ RE+I+RD RFHHF+ G CSC DYW
Sbjct: 608 IVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 150/360 (41%), Gaps = 44/360 (12%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--------EACKLFDEIPQRDTVAWNV 101
L H L D L S L +T + Y+T + A LFD +P+RD +W+
Sbjct: 70 LSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSA 129
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPD-DVTCLLVLQACAHLGALEFGEKIHRYIS 160
++S + R+ + R AL ++ + RE D + T L A G ++H ++
Sbjct: 130 IVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVV 189
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
G + + ++L MY+KCG + A VF MP +DVVSW+AM+ +
Sbjct: 190 RRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFR 249
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD------FGILPNIHHYG 274
F M R+G+ P++ T+ GVL AC+ G RM+K F +H Y
Sbjct: 250 LFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYS 309
Query: 275 CVVDL------------------------LGRAGLLDQA---YQLITSMGVKPDSTIWRT 307
D+ + G D+A + ++ G +PD +
Sbjct: 310 KYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVG 369
Query: 308 LLGACRIHKHVTLGERVIEHLI-ELKAQESGD-YVLLLNLYSSVGDWEKVKELREFMNEK 365
+L AC V G + + E + + D Y +++L S G +E+ +E+ M+ K
Sbjct: 370 VLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVK 429
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 303/516 (58%), Gaps = 19/516 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP------TNPFACSFAIKCCMKFCSLMGGLQIHA 54
++R ++ SS P F + M Q+ + CSF +K C + Q+H
Sbjct: 74 IIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHC 133
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
++ R G DS L TTL+D YS A KLFDE+P RD +WN LI+ + R +
Sbjct: 134 QINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASE 193
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNS 173
A+ L+ + E G + +VT + L AC+HLG ++ GE I HGY + + + N+
Sbjct: 194 AMELYKRM--ETEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDNVIVSNA 246
Query: 174 LIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
I MYSKCG + A++VF+ +K VV+W+ MI+G A++G A+E F ++ G+ P
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
DD ++ L+AC H GLV+ G+ + M+ G+ N+ HYGCVVDLL RAG L +A+ +
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDI 365
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I SM + PD +W++LLGA I+ V + E + E+ GD+VLL N+Y++ G W
Sbjct: 366 ICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRW 425
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+ V +R+ M K ++ PG S I KG +HEF D SH + EIY+ +DEI +++
Sbjct: 426 KDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRED 485
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL---ATPPGTTIRVAKNLRICVDCH 469
GYVA+ LH++G EEK NAL YHSEKLA+A+G++ + +RV NLRIC DCH
Sbjct: 486 GYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCH 545
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S +Y RE+I+RDR+RFH F++G CSC D+W
Sbjct: 546 VVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 295/505 (58%), Gaps = 3/505 (0%)
Query: 2 VRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ Y + P E LF M R +R +N F S A+ L G +IH ++R
Sbjct: 191 ISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTE 250
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD + + L+DLY EA +FD++ RD V+W +I + R + LF
Sbjct: 251 LNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFR 310
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+L +SG +P++ T VL ACA A G+++H Y+ GY ++L+ MYSK
Sbjct: 311 DLM--QSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSK 368
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+ +A VF M + D+VSW+++I G A NG +A+ F + ++G PD T+ GV
Sbjct: 369 CGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGV 428
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC+H GLVD+G+ + + + G++ HY CV+DLL R+G +A +I +M VKP
Sbjct: 429 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKP 488
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W +LLG CRIH ++ L +R + L E++ + Y+ L N+Y++ G W +V +R+
Sbjct: 489 DKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRK 548
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M+ G+ PG S I +K VH F+V D SHP+ ++I++ L E++K++K GYV +
Sbjct: 549 DMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNF 608
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L YHSEKLA+ FG+++TPPGT I+V KNLR CVDCH K +S +
Sbjct: 609 VLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQ 668
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++ +RD RFH F +G CSC DYW
Sbjct: 669 RKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 154/335 (45%), Gaps = 42/335 (12%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ + +A KLFDE+PQRD +WN IS Y+ + + R+AL LF + R E
Sbjct: 157 NTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERS 216
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ T L A A + L G++IH Y+ + ++L+ +Y KCGSL A
Sbjct: 217 SS-NKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEAR 275
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS--- 245
+F M ++DVVSW+ MI +G + F + ++GV P++ TF GVL+AC+
Sbjct: 276 GIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHA 335
Query: 246 --HCGLVDEG-MMFLDRMSKDFGILPNIHHYGCV---------------VDLLGRAGLL- 286
H G G MM F I +H Y DL+ L+
Sbjct: 336 AEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395
Query: 287 --------DQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
D+A ++L+ G KPD + +L AC H L ++ +E+ +K +
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSAC---THAGLVDKGLEYFHSIKEKH 452
Query: 336 -----SGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ Y +++L + G +++ + + + M K
Sbjct: 453 GLMHTADHYACVIDLLARSGRFKEAENIIDNMPVK 487
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 124/329 (37%), Gaps = 77/329 (23%)
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ +R ++A+ L + +P ++ AC ALE G ++H + +
Sbjct: 67 QQKRVKEAVELLHRTDH-----RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPG 121
Query: 168 MNLCNSLIAMYSKCGSL-------------------------------GMAFEVFKGMPE 196
+ + N L+ MY+KCGSL A ++F MP+
Sbjct: 122 VFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQ 181
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQR-----------------AGVFP------- 232
+D SW+A ISG + R+A+E F MQR + P
Sbjct: 182 RDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKE 241
Query: 233 ------------DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
D+ ++ +L CG +DE D+M + + C D
Sbjct: 242 IHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGR 301
Query: 281 GRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV 340
G L ++ + GV+P+ + +L AC H LG+ V +++ + G +
Sbjct: 302 REEGFL--LFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMH-AGYDPGSFA 358
Query: 341 L--LLNLYSSVGDWEKVKELREFMNEKGL 367
+ L+++YS G+ + + M++ L
Sbjct: 359 ISALVHMYSKCGNTRVARRVFNEMHQPDL 387
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/540 (37%), Positives = 307/540 (56%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y EE F L +M I + + + I G Q+HA VLR
Sbjct: 245 MISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV 304
Query: 61 YQLDSQLMTT----LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA- 115
Q + + L+ LY+ K EA ++FD++P +D V+WN ++S + +R +A
Sbjct: 305 VQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEAN 364
Query: 116 ------------------------------LCLFDNLNREESGCKPDDVTCLLVLQACAH 145
L LF+ + E G +P D + +C+
Sbjct: 365 SIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLE--GLEPCDYAYAGAIASCSV 422
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LG+L+ G+++H I + G+ S +++ N+LI MYS+CG + A VF MP D VSW+AM
Sbjct: 423 LGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAM 482
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+ LA +GHG AI+ + M + + PD TF +LSACSH GLV EG + D M +G
Sbjct: 483 IAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYG 542
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P HY ++DLL RAG+ +A + SM +P + IW LL C IH ++ LG +
Sbjct: 543 ITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAA 602
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L+EL Q+ G Y+ L N+Y+++G W++V +R+ M E+G++ PGCS I ++ +VH F
Sbjct: 603 DRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVF 662
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+VDD HP ++ +Y+ L+++ +++ GYV + LH++ +E+K ALS HSEKLA+ +
Sbjct: 663 LVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVY 722
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G++ P G TIRV KNLRIC DCHN K +S V +RE+I+RDR RFHHFR G CSC++YW
Sbjct: 723 GIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 178/449 (39%), Gaps = 100/449 (22%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL---------- 50
M+ A+S S LF +M++ +PF F S++G L
Sbjct: 101 MITAFSHSHDGHAALQLFVQMKRLGFVPDPFT----------FSSVLGALSLIADEETHC 150
Query: 51 -QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS---------FEACKLFDEIP--QRDTVA 98
Q+H V + G ++ LM Y + S A KLFDE P +RD A
Sbjct: 151 QQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPA 210
Query: 99 WNVLISCYIRNQRTRDALCL----------------------------FDNLNREES-GC 129
W +I+ Y+RN A L FD L R S G
Sbjct: 211 WTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGI 270
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK----MNLCNSLIAMYSKCGSLG 185
+ D+ T V+ A ++ G G ++H Y+ +++ N+LI +Y++CG L
Sbjct: 271 QLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLV 330
Query: 186 MAFEVFKGMPEKDVVSWSA-------------------------------MISGLAMNGH 214
A VF MP KD+VSW+A MISGLA NG
Sbjct: 331 EARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGF 390
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
G + ++ F M+ G+ P D + G +++CS G +D G ++ + G ++
Sbjct: 391 GEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQ-LGHDSSLSVGN 449
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
++ + R GL++ A + +M DS W ++ A H H ++ E + LK
Sbjct: 450 ALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALAQHGHGVQAIQLYEKM--LKED 506
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMN 363
D + L + S+ VKE R + +
Sbjct: 507 ILPDRITFLTILSACSHAGLVKEGRHYFD 535
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGH 214
RY+ + + ++++ YS G++ +A ++F P +D VS++AMI+ + +
Sbjct: 51 RYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHD 110
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
G A++ F M+R G PD TF+ VL A S
Sbjct: 111 GHAALQLFVQMKRLGFVPDPFTFSSVLGALS 141
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/509 (38%), Positives = 295/509 (57%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R S EE L+ +M ++ I + F F +K C +L G+QIHA V + G
Sbjct: 102 MIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAG 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D + L+ +Y A +F+++ ++ +W+ +I + + + L L
Sbjct: 162 LEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLG 221
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLCNSLIA 176
+++ E + ++ + L AC HLG+ G IH R ISE K SLI
Sbjct: 222 DMSGEGRH-RAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVK----TSLID 276
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGSL VF+ M K+ S++ MI+GLA++G GR+A+ F M G+ PDD
Sbjct: 277 MYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVV 336
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ GVLSACSH GLV+EG+ +RM + I P I HYGC+VDL+GRAG+L +AY LI SM
Sbjct: 337 YVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSM 396
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+KP+ +WR+LL AC++H ++ +GE E++ L GDY++L N+Y+ W V
Sbjct: 397 PIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVA 456
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R M EK L TPG S + V++FV D S P IY M+ ++ QLK GY
Sbjct: 457 RIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTP 516
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+++ L ++ +EK L +HS+KLAIAF ++ T G+ IR+++NLR+C DCH + K +S
Sbjct: 517 DMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFIS 576
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE+ +RDR RFHHF++G CSC DYW
Sbjct: 577 VIYEREITVRDRNRFHHFKDGTCSCKDYW 605
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA--MYSKCGS 183
E K ++ L +L+ C ++E +++H +I + G ++L+A S+ GS
Sbjct: 24 ELNAKFNEQGWLSLLKRCK---SMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGS 80
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ A +F + E ++ MI G + +A+ + M G+ PD+ T+ VL A
Sbjct: 81 MEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKA 140
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CS + EG+ + K G+ ++ ++ + G+ G ++ A + M K ++
Sbjct: 141 CSLLVALKEGVQIHAHVFKA-GLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVAS 199
Query: 304 IWRTLLGA 311
W +++GA
Sbjct: 200 -WSSIIGA 206
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/505 (40%), Positives = 292/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E +F +MR + + A ++ L G IH V++ G
Sbjct: 226 IISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMG 285
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +L Y+ A FD++ + + WN +IS Y +N +A+ LF
Sbjct: 286 LEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFH 345
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ KPD VT + A A +G+LE + + Y+S+ YGS + + SLI MY+K
Sbjct: 346 YMISRN--IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAK 403
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF +KDVV WSAMI G ++G G +AI + M++AGVFP+D TF G+
Sbjct: 404 CGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGL 463
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+AC+H GLV EG M KDF I+P HY CVVDLLGRAG L +A I + ++P
Sbjct: 464 LTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEP 522
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W LL AC+I++ VTLGE L L +G YV L NLY+S W+ V +R
Sbjct: 523 GVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRV 582
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EKGL G S I + G + F V D SHP EI+ L + ++LK G+V S
Sbjct: 583 LMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTES 642
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EEK LS+HSE++A+A+G+++T PGTT+R+ KNLR CV+CH+ K++S +
Sbjct: 643 VLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVE 702
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 703 REIIVRDANRFHHFKDGLCSCGDYW 727
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIH R++ G Q + LMT L++ S + A KLFDE D WN +I Y RN
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK--IHRYISEHGYGSKM 168
RD + ++ + +G PD T VL+AC L L+FG IH I ++G+GS +
Sbjct: 134 MYRDTVEMYRWM--RWTGVHPDGFTFPYVLKACTEL--LDFGLSCIIHGQIIKYGFGSDV 189
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N L+A+Y+KCG +G+A VF G+ + +VSW+++ISG A NG +A+ F M+
Sbjct: 190 FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249
Query: 229 GVFPDDQTFTGVLSACS-----------------------------------HCGLVDEG 253
GV PD +L A + CGLV
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVA 309
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLLG 310
F D+M N+ + ++ + G ++A L + S +KPDS R+ +
Sbjct: 310 KSFFDQMKT-----TNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVL 364
Query: 311 A 311
A
Sbjct: 365 A 365
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 151/316 (47%), Gaps = 6/316 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+YS ++ + ++ MR + + F + +K C + IH ++++ G
Sbjct: 125 IIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYG 184
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ LY+ A +FD + R V+W +IS Y +N + +AL +F
Sbjct: 185 FGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFS 244
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G KPD + + +L+A + LE G IH ++ + G + L SL A Y+K
Sbjct: 245 QM--RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAK 302
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A F M +V+ W+AMISG A NGH +A+ F M + PD T
Sbjct: 303 CGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSA 362
Query: 241 LSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+ A + G ++ D +SK ++G +I ++D+ + G ++ A ++ K
Sbjct: 363 VLASAQVGSLELAQWMDDYVSKSNYG--SDIFVNTSLIDMYAKCGSVEFARRVFDRNSDK 420
Query: 300 PDSTIWRTLLGACRIH 315
D +W ++ +H
Sbjct: 421 -DVVMWSAMIMGYGLH 435
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 21/230 (9%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
++IH + G L L+ S G + A ++F DV W+A+I + N
Sbjct: 73 DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRN 132
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
RD +E + M+ GV PD TF VL AC+ L+D G+ + I I
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE--LLDFGLSCI--------IHGQIIK 182
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKP---DSTIWRTLLGACRIHKHVTLGERVIEHLI 329
YG D+ + GL+ Y +GV D RT++ I + +E L
Sbjct: 183 YGFGSDVFVQNGLV-ALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR 241
Query: 330 ELKAQESG----DYVLLLNL---YSSVGDWEKVKELREFMNEKGLQTTPG 372
+ D++ L+++ Y+ V D E+ + + F+ + GL+ P
Sbjct: 242 MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 297/494 (60%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF M + N F S +K C +L G Q+ ++ G+ + + +L
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ + +A K FD + +++ +++N +I Y +N + +AL LF+ + E+ G
Sbjct: 418 ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI--EDQGMGA 475
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
T +L A +G + GE+IH + + G ++CN+LI+MYS+CG++ AF+VF
Sbjct: 476 SAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVF 535
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ M +++V+SW+++I+G A +G A+E F M GV P+ T+ VLSACSH GLV+
Sbjct: 536 EDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVN 595
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG M + G++P + HY C+VD+LGR+G L +A Q I SM K D+ +WRT LGA
Sbjct: 596 EGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H ++ LG+ + +IE + + Y+LL NLY+S W++V +R+ M EK L
Sbjct: 656 CRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEA 715
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS + ++ VH+F V D SHP+ EIY L ++ ++K GYV + LH++ E+K
Sbjct: 716 GCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKE 775
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L HSEK+A+AFG+++T IRV KNLRIC DCH+ K +S RE+I+RD RF
Sbjct: 776 KLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRF 835
Query: 492 HHFREGRCSCNDYW 505
HH ++GRCSCN+YW
Sbjct: 836 HHIKDGRCSCNEYW 849
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 173/375 (46%), Gaps = 43/375 (11%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-P 92
S +K C++ S G +H ++ + QLDS + +L+ LYS + +A +F +
Sbjct: 70 SLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGS 129
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
RD ++W+ ++SC+ N AL F ++ E+G P++ +AC+ + G
Sbjct: 130 SRDLISWSAMVSCFANNNMGFRALLTF--VDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 153 EKIHRYISEHGY-GSKMNLCNSLIAMYSKC-GSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
+ I ++ + GY S + + LI M+ K G L AF+VF+ MPE++ V+W+ MI+ L
Sbjct: 188 DSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH------------------------ 246
G+ +AI+ F M +G PD T +GV+SAC++
Sbjct: 248 QFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 247 --CGLVD-------EGMMFLDRMSKDFGILPNIHHYGCVVD-LLGRAGLLDQAYQLITSM 296
C L++ +G M R D + N+ + ++ + + G ++A L M
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDW 352
V P+ + + L AC + +GE+V H ++L L+++Y+ G
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRI 427
Query: 353 EKVKELREFMNEKGL 367
+ ++ + + EK L
Sbjct: 428 DDARKAFDILFEKNL 442
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 191/445 (42%), Gaps = 52/445 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ ++ F M + N + + A + C + G I V++ G
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTG 198
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSF-EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
Y Q D + L+D++ A K+F+++P+R+ V W ++I+ ++ +A+ L
Sbjct: 199 YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDL 258
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L SG +PD T V+ ACA++ L G+++H HG + LI MY
Sbjct: 259 F--LEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMY 316
Query: 179 SKC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMN-GHGRDAIESFGAMQRAGVFPDD 234
+KC GS+ A ++F + + +V SW+AMI+G G+ +A++ F M V P+
Sbjct: 317 AKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH 376
Query: 235 QTFTGVLSACSHCGLVDEGMMF----------------------------LDRMSKDFGI 266
TF+ L AC++ + G +D K F I
Sbjct: 377 FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDI 436
Query: 267 L--PNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
L N+ Y V+D + ++A +L I G+ + + +LL + G
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Query: 322 ERVIEHLIE--LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
E++ +I+ LK +S L+++YS G+ E ++ E M ++ + I
Sbjct: 497 EQIHARVIKSGLKLNQSVCNA-LISMYSRCGNIESAFQVFEDMEDRNV--------ISWT 547
Query: 380 GVVHEFVVDDVSHPRINEIYQMLDE 404
++ F + + ++ML+E
Sbjct: 548 SIITGFAKHGFATQALELFHKMLEE 572
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + + EE LF ++ + + + F + + ++ G QIHARV++ G
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSG 507
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L+ + L+ +YS A ++F+++ R+ ++W +I+ + ++ AL LF
Sbjct: 508 LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ E G +P+ VT + VL AC+H+G + G K + + +EHG +M ++ +
Sbjct: 568 KM--LEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILG 625
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ GSL A + MP K D + W + ++G+
Sbjct: 626 RSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN 661
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
I N R A+ +++ + G PD T L L+ C + + G +H +++
Sbjct: 42 INNGRLHKAISTLEHMVHQ--GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQL 99
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
NSLI++YSKCG A +F+ M +D++SWSAM+S A N G A+ +F M
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM 159
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEG 253
G +P++ F ACS V G
Sbjct: 160 IENGYYPNEYCFAAATRACSTAEFVSVG 187
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/511 (38%), Positives = 306/511 (59%), Gaps = 12/511 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQ----IHARV 56
M+ AY + PEE LF+KM+Q+ A S A+ +G ++ +H
Sbjct: 29 MITAYEQAEKPEEALILFKKMQQEE---GLLADSIAVVSVASAVGQLGDVKNAHTVHGYA 85
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
R + + +++ +++ + +A +FD + +RD ++WN ++S Y +N + +AL
Sbjct: 86 FRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEAL 145
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LFD + +S C+P VT L+++ ACA+LG G K H +I + NL N+L+
Sbjct: 146 LLFDEM--RDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMD 203
Query: 177 MYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
MY+KCG L A ++F G+P E++ SW+ +ISG M+GHG++A+E F MQ GV P+
Sbjct: 204 MYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNH 263
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TFT +LSACSH GL+DEG M + L + HH CVVD+LGRAGLL +A+ LI
Sbjct: 264 FTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHH-ACVVDMLGRAGLLQEAFDLIK 322
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
M P +W LL AC+IH ++ LG+ +L++L+ +G YVL+ N+Y++ W++
Sbjct: 323 EMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKE 382
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +LR+ M KGL+ S I + F D +P +E+Y+ ++ + ++K+AGY
Sbjct: 383 VWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGY 442
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
V +++ LH++ E+K L+YHSEKLA+AFGVL PG IRV KNLR+C DCH+ K
Sbjct: 443 VPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKY 502
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S +Y R++I+RD RFHHF+ G CSC DYW
Sbjct: 503 ISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 17/240 (7%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
K+FDE+ +D V W +I+ Y + ++ +AL LF + +EE G D + + V A
Sbjct: 13 KIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEE-GLLADSIAVVSVASAVGQ 71
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LG ++ +H Y ++ + NS++AM++KCG+ A VF M E+DV+SW++M
Sbjct: 72 LGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSM 131
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD-----RM 260
+SG NG +A+ F M+ + P T ++SAC++ G G F D RM
Sbjct: 132 LSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRM 191
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP---DSTIWRTLLGACRIHKH 317
D + ++D+ + G L++A L G+ P ++ W L+ +H H
Sbjct: 192 EIDTNL------SNALMDMYAKCGDLEKAVDLFN--GIPPTERNAGSWNVLISGYGMHGH 243
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQ 235
MY+KCG ++F M KD+V W+AMI+ +A+ F MQ+ G+ D
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 236 TFTGVLSACSHCGLV 250
V SA G V
Sbjct: 61 AVVSVASAVGQLGDV 75
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 293/488 (60%), Gaps = 3/488 (0%)
Query: 19 EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTF 78
E + ++ + F S + + + G +IH +R+G+ D + ++L+D+Y+
Sbjct: 216 EMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKC 275
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
+ + + F +P++D ++WN +I+ ++N L F + +E KP V+
Sbjct: 276 NRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKEN--VKPMAVSFSS 333
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
V+ ACAHL AL G ++H I G+ + +SL+ MY+KCG++ MA VF + ++D
Sbjct: 334 VIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRD 393
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+V+W+A+I G AM+GH DA+ F M GV P F VL+ACSH GLVDEG + +
Sbjct: 394 MVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFN 453
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM-GVKPDSTIWRTLLGACRIHKH 317
M +DFGI P + HY V DLLGRAG L++AY I++M GV+P ++W LL ACR HK
Sbjct: 454 SMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKS 513
Query: 318 VTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
V L E+V++ L+ + ++ G YVL+ N+YS+ W+ LR M +KGL+ TP CS I
Sbjct: 514 VELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIE 573
Query: 378 LKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYH 437
+ VH F+ D SHP ++I + LD + +Q++ GYV + LH++ E K L H
Sbjct: 574 VGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNH 633
Query: 438 SEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREG 497
SE+LAIA+G+++T GTTIRV KN+R+C DCH K ++ + RE+ +RD RFHHF+ G
Sbjct: 634 SERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNG 693
Query: 498 RCSCNDYW 505
CSC DYW
Sbjct: 694 SCSCGDYW 701
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
+ G F +M ++ + P A SF+ I C +L G Q+H ++R G+ + + +
Sbjct: 310 DRGLGFFRRMLKENV--KPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIAS 367
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
+L+D+Y+ A +FD I +RD VAW +I + DA+ LF+N+ E G
Sbjct: 368 SLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENM--LEDGV 425
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+P V + VL AC+H G ++ G + + + G + ++ + + G L A+
Sbjct: 426 RPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAY 485
Query: 189 EVFKGM----PEKDVVSWSAMISG 208
+ M P V WS +++
Sbjct: 486 DFISNMRGVQPTGSV--WSILLAA 507
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 26/234 (11%)
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
AW+ +I CY + + F+++ P+ +L+A L + +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSM--RSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHA 134
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG---------------MPEKDVVSW 202
G S + + N+LI Y+K + G F+VF MP +DVVSW
Sbjct: 135 CTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSW 194
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
+ +I+G A NG +A++ M + G PD T + +L + V++G
Sbjct: 195 NTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAV 254
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLD---QAYQLITSMGVKPDSTIWRTLLGAC 312
++ G ++ ++D+ + L+ +A+ ++ + D+ W +++ C
Sbjct: 255 RN-GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP----RKDAISWNSIIAGC 303
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/493 (40%), Positives = 288/493 (58%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E YLF +M+ + + + F S +K C + G QIHA++ + Q D + L+
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALV 371
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+LYS + K F P+ D V+W LI +++N + L LF L SG KPD
Sbjct: 372 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF--SGRKPD 429
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ T ++L ACA+L A++ GE+IH Y + G G+ + NS I MY+KCG + A FK
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 489
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
D+VSWS MIS A +G ++A++ F M+ +G+ P+ TF GVL ACSH GLV+E
Sbjct: 490 ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEE 549
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G+ + + M KD GI PN+ H C+VDLLGRAG L +A I G + D +WR+LL AC
Sbjct: 550 GLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 609
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+HK G+RV E +IEL+ + + YVLL N+Y+ G E+R M ++G++ PG
Sbjct: 610 RVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPG 669
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I + VVH FV D SHP IY L+E+ +++K Y+ E + + +
Sbjct: 670 LSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNS 729
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
+SYHSEKLA+ FG+++ P +RV KNLR C CH K+ S + NRE+I+RD +RFH
Sbjct: 730 MVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFH 789
Query: 493 HFREGRCSCNDYW 505
FR+G CSC DYW
Sbjct: 790 RFRDGSCSCGDYW 802
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 155/375 (41%), Gaps = 55/375 (14%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
+P + + ++C + SL+ G H +++ ++ L+ L+ +Y ++ A
Sbjct: 15 LPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAK 74
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
KLFD +P+R+ V+WN LIS Y + + + LF S + D T L C
Sbjct: 75 KLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM--SDLRLDKFTFSNALSVCGR 132
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G IH I+ G G + L NSLI MY KCG + A VF+ E D VSW+++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-------HCGLVDEGMMF-- 256
I+G G + + M R G+ + L AC CG + G
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252
Query: 257 ---------------------LDRMSKDFGIL--PNIHHYGCVVDLLGRAGLL------- 286
L+ +K F ++ PN+ Y ++ AG L
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI-----AGFLQMETMAD 307
Query: 287 ---DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV 340
++A L M G+KP + ++L AC + G+++ + + Q S +++
Sbjct: 308 EFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ-SDEFI 366
Query: 341 --LLLNLYSSVGDWE 353
L+ LYS G E
Sbjct: 367 GNALVELYSLSGSIE 381
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 164/395 (41%), Gaps = 56/395 (14%)
Query: 7 MSSSPEEGFY-----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+S + GFY LF++ R + + F S A+ C + L G IHA + G
Sbjct: 92 ISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGL 151
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
L +L+D+Y + A +F+ + D+V+WN LI+ Y+R + L L
Sbjct: 152 GGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVK 211
Query: 122 LNREESGCKPDDVTCLLVLQACAH--LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G + L+AC ++E G+ +H + G + + +L+ Y+
Sbjct: 212 MLRH--GLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA 269
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM-----NGHGRDAIESFGAMQRAGVFPDD 234
K G L A ++FK MP+ +VV ++AMI+G + +A+ F MQ G+ P +
Sbjct: 270 KIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSE 329
Query: 235 QTFTGVLSACS-----HCGLVDEGMMFLDRMSKD-----------------------FGI 266
TF+ +L ACS CG +F + D F
Sbjct: 330 FTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS 389
Query: 267 LPNIHHYGCVVDLLGRA------GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
P + ++G G L ++L+ S G KPD +L AC V
Sbjct: 390 TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS-GRKPDEFTISIMLSACANLAAVKS 448
Query: 321 GERVIEHLIELKAQESGDYVLLLN----LYSSVGD 351
GE++ + I+ G++ ++ N +Y+ GD
Sbjct: 449 GEQIHAYAIKTGI---GNFTIIQNSQICMYAKCGD 480
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G D VT ++Q G+L G+ H ++ + + + L N+L+ MY KCG +A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
++F MP+++VVSW+++ISG G + + F + + + D TF+ LS C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
+ G + ++ G+ + ++D+ + G +D A +L+ + DS W +
Sbjct: 134 LDLRLGRLIHALITVS-GLGGPVLLTNSLIDMYCKCGRIDWA-RLVFESADELDSVSWNS 191
Query: 308 LL-GACRI 314
L+ G RI
Sbjct: 192 LIAGYVRI 199
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E G LF ++ + F S + C ++ G QIHA ++ G + + +
Sbjct: 412 EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQ 471
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ A F E D V+W+V+IS ++ ++A+ LF+ + + SG P
Sbjct: 472 ICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM--KGSGIAP 529
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMA--F 188
+ +T L VL AC+H G +E G + + +HG + ++ + + G L A F
Sbjct: 530 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF 589
Query: 189 EVFKGMPEKDVVSWSAMISG 208
+ G E D V W +++S
Sbjct: 590 IMDSGF-EGDPVMWRSLLSA 608
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 265/423 (62%), Gaps = 3/423 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++F ++P +D V+W+ +I + N DA F + RE G +P++V+ VL AC
Sbjct: 222 AREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRRE--GMRPNEVSLTGVLSAC 279
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A GA EFG +H ++ + G+ +++ N+LI YSKCG+L MA VF M + VSW+
Sbjct: 280 AQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWT 339
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI+G+AM+G+G +AI F M+ + + PD TF +L ACSH GLVD G + RM
Sbjct: 340 AMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNT 399
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+GI P I HYGC+VDL GRAG L QAY + M + P+ +WRTLLGAC IH ++ L +
Sbjct: 400 YGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQ 459
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
V L EL + SGD+VLL N+Y+ G W+ V LR M + L+ TPG S I + +++
Sbjct: 460 VKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIY 519
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
FV + + E +Q L EI +L+I GYV E+ S LH++ EEK +++S HSEKLA
Sbjct: 520 SFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLA 579
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
+AFG+ P G IRV KNLRIC DCH K++S VY E+++RDR RFH F G CSC
Sbjct: 580 VAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCR 639
Query: 503 DYW 505
DYW
Sbjct: 640 DYW 642
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 153/335 (45%), Gaps = 51/335 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R S S +P LF +MR+K + + F+ +F +K +L GLQ+H L
Sbjct: 76 LIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHC--LAV 133
Query: 60 GYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
GY LDS L TTL+ +Y+ A K+FDE+ + + VAWN +++ R + +DA
Sbjct: 134 GYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQ 193
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+F C P + N ++A
Sbjct: 194 VFR--------CMPI---------------------------------RNLTSWNIMLAG 212
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+K G L +A EVF MP KD VSWS MI G A NG+ DA F ++R G+ P++ +
Sbjct: 213 YTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSL 272
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
TGVLSAC+ G + G + + K G L I ++D + G LD A + +M
Sbjct: 273 TGVLSACAQAGAFEFGRILHGFVEKS-GFLQIISVNNALIDTYSKCGNLDMARLVFDNM- 330
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
++ + W ++ +H + GE I E++
Sbjct: 331 LRRSAVSWTAMIAGMAMHGY---GEEAIRLFNEME 362
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LF +I D +N LI + +AL LF + R +S PD + +L+A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEM-RRKSVALPDSFSFAFLLKAA 116
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A+ AL G ++H +G S + + +LI+MY++C L A +VF M E ++V+W+
Sbjct: 117 ANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWN 176
Query: 204 AMISGLAMNGHGRDAIESFGAM---------------QRAG-------VF-----PDDQT 236
A+++ +DA + F M +AG VF DD +
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVS 236
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
++ ++ +H G ++ F + ++ G+ PN V+ +AG +
Sbjct: 237 WSTMIVGFAHNGNFNDAFAFFREVRRE-GMRPNEVSLTGVLSACAQAGAFE 286
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQTFTGVL 241
SL A +F + DV ++ +I GL+ + +A++ F M+R V PD +F +L
Sbjct: 54 SLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLL 113
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
A ++C + G+ L ++ +G+ ++ ++ + L A ++ M ++P+
Sbjct: 114 KAAANCRALTNGLQ-LHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM-IEPN 171
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
W ++ AC + V E+V + + + ++L Y+ G+ + +E+
Sbjct: 172 IVAWNAIVAACFRCEGVKDAEQVFRC---MPIRNLTSWNIMLAGYTKAGELQLAREV 225
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 302/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + + L+ KM + + F F +K C ++ G IH V++ G
Sbjct: 119 LIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSG 178
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+D+Y+ +A ++FD+I RD V WN +++ Y +N +++ L
Sbjct: 179 WERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCR 238
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G +P + T + V+ + A + L +G +IH + HG+ S + +LI MY+K
Sbjct: 239 EM--AANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAK 296
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A +F+ + EK VVSW+A+I+G AM+G A++ F M++ PD TF GV
Sbjct: 297 CGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDR-PDHITFVGV 355
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACS L+DEG + M +D+GI P + HY C++DLLG G LD+AY LI +M VKP
Sbjct: 356 LAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKP 415
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +W LL +C+IH +V L E +E LIEL+ +SG+YV+L N+Y+ G WE V++LR+
Sbjct: 416 DSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQ 475
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +K ++ CS I +K V+ F+ DVSH + IY L + + AGY + S
Sbjct: 476 VMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGS 535
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H++ +EK + + HSE+LAIAFG+++T PGT + + KNLRIC DCH K +S +
Sbjct: 536 VFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIME 595
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD R+H F+ G CSC D+W
Sbjct: 596 REITVRDVNRYHSFKHGMCSCGDHW 620
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT + + ++ C+ +L G Q+HA+ G + L T L+ LY+ A
Sbjct: 44 PTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARN 103
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD+IP+++ WNVLI Y N +A+ L+ + + G +PD+ T VL+AC+ L
Sbjct: 104 LFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKM--LDYGLRPDNFTLPFVLKACSAL 161
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
A+ G IH Y+ + G+ + + +LI MY+KCG + A VF + +D V W++M+
Sbjct: 162 SAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSML 221
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ A NGH ++I M GV P + T V+S+ + + G
Sbjct: 222 AAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYG 268
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+LQ+C AL G+++H G +L L+ +Y+ SL A +F +P+++
Sbjct: 53 LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQN 112
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+ W+ +I G A NG +AI + M G+ PD+ T VL ACS + EG +
Sbjct: 113 LFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHE 172
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ K G ++ ++D+ + G + A ++ + V+ D+ +W ++L A
Sbjct: 173 YVIKS-GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAA 223
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/456 (41%), Positives = 285/456 (62%), Gaps = 2/456 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G +IH ++R G +LD + T L+DLY EA +FD++ +D V+W +I
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ R ++ LF +L SG +P++ T VL ACA L A + G+++H Y++ GY
Sbjct: 275 DGRKKEGFSLFRDL--MGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS 332
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
++L+ +YSKCG+ A VF MP D+VSW+++I G A NG A++ F ++ R+
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G PD+ TF GVLSAC+H GLVD G+ + + + G++ HY CV+DLL R+G +
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A +I +M +KPD +W +LLG CRIH ++ L ER + L EL+ + Y+ L N+Y++
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYAN 512
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
G W + ++R M+ +G+ PG S I +K VH F+V D SHP+I++I++ L E++K+
Sbjct: 513 AGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKK 572
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K GYVA+ LH++ E+K + YHSEKLA+AFG+++T PGT I+V KNLR CVDC
Sbjct: 573 MKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDC 632
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
HN K +S + R++I+RD RFH F +G CSC DY
Sbjct: 633 HNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 135/318 (42%), Gaps = 37/318 (11%)
Query: 25 RIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE 83
RIP +P S I C++ L G ++HA + + L+ +Y+ +
Sbjct: 57 RIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVD 116
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------------------- 122
A LFDEIPQ+D +WN +IS Y R A LFD +
Sbjct: 117 AQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWY 176
Query: 123 -----------NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
E S C + T L A A + +L G++IH Y+ G +
Sbjct: 177 MEALDLFRMMQENESSNC--NMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVW 234
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+L+ +Y KCGSL A +F M +KD+VSW+ MI +G ++ F + +GV
Sbjct: 235 TALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVR 294
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P++ TF GVL+AC+ G M++ G P +V + + G + A +
Sbjct: 295 PNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGYDPFSFAASALVHVYSKCGNTETARR 353
Query: 292 LITSMGVKPDSTIWRTLL 309
+ M +PD W +L+
Sbjct: 354 VFNQM-PRPDLVSWTSLI 370
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+EGF LF + + N + + + C + G ++H + R GY S + L
Sbjct: 279 KEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASAL 338
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +YS + A ++F+++P+ D V+W LI Y +N + AL F++L R SG KP
Sbjct: 339 VHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR--SGTKP 396
Query: 132 DDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
D++T + VL AC H G ++ G E H +HG + +I + ++ G A +
Sbjct: 397 DEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENI 456
Query: 191 FKGMPEK-DVVSWSAMISGLAMNGH 214
MP K D W++++ G ++G+
Sbjct: 457 IDNMPMKPDKFLWASLLGGCRIHGN 481
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 77 TFEKSFEACKLFDE---IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC---- 129
F ++F + F + + +DT +S + ++R + + LF NR +
Sbjct: 2 AFRRAFSSSSQFHKNLNLNPKDTT-----LSHHSEHRRFEEIIELFCQQNRLKEAVDYLH 56
Query: 130 ---KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+P ++ AC LE G+++H + + + + N LI MY+KCGSL
Sbjct: 57 RIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVD 116
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A +F +P+KD+ SW+ MISG A G A + F M F + +G +S +
Sbjct: 117 AQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWY 176
Query: 247 CGLVDEGMMFLDRMSKDFGIL------------------PNIHHY-------------GC 275
+D M + S + + IH Y
Sbjct: 177 MEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTA 236
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
++DL G+ G L++A + M K D W T++ C
Sbjct: 237 LLDLYGKCGSLNEARGIFDQMADK-DIVSWTTMIHRC 272
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 266/423 (62%), Gaps = 2/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A KLFD +PQRD V+W +IS Y +N +AL +F + R+ +C L
Sbjct: 343 QARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSC--ALST 400
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA + ALE G+++H + + G+ + + N+L+ MY KCGS A +VF+G+ EKDVVSW
Sbjct: 401 CADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSW 460
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI+G A +G GR A+ F +M++AGV PD+ T GVLSACSH GL+D G + M +
Sbjct: 461 NTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR 520
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
D+ + P HY C++DLLGRAG L++A L+ +M P + W LLGA RIH + LGE
Sbjct: 521 DYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE 580
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+ E + +++ Q SG YVLL NLY++ G W V ++R M E G+Q G S + ++ +
Sbjct: 581 KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKI 640
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
H F V D HP + IY L+E++ +++ GYV+ LH++ EEK + L YHSEKLA
Sbjct: 641 HTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLA 700
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
+AFG+L P G IRV KNLR+C DCHN K +S + R +I+RD RFHHF EG CSC
Sbjct: 701 VAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCG 760
Query: 503 DYW 505
DYW
Sbjct: 761 DYW 763
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + EE +F +M++ +N S A+ C +L G Q+H +V++ G
Sbjct: 362 IISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAG 421
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+ +Y + EA +F+ I ++D V+WN +I+ Y R+ R AL LF+
Sbjct: 422 FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFE 481
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG----SKMNLCNSLIA 176
++ +++G KPD++T + VL AC+H G ++ G + + Y + Y SK C +I
Sbjct: 482 SM--KKAGVKPDEITMVGVLSACSHSGLIDRGTE-YFYSMDRDYNVKPTSKHYTC--MID 536
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAM--QRAGV 230
+ + G L A + + MP + SW A++ ++G+ G A E M Q +G+
Sbjct: 537 LLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 596
Query: 231 F 231
+
Sbjct: 597 Y 597
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 151/382 (39%), Gaps = 74/382 (19%)
Query: 46 LMGGLQIHARVLRDGYQLDSQL-------MTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
LMGG + +L D QL ++ T++ Y+ +A +LF+E P RD
Sbjct: 207 LMGGY-VKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFT 265
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
W ++S Y++N +A FD + + ++++ +L + ++
Sbjct: 266 WTAMVSGYVQNGMVDEARKYFDEMPVK------NEISYNAMLAGYVQYKKMVIAGELFEA 319
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ S N++I Y + G + A ++F MP++D VSW+A+ISG A NGH +A
Sbjct: 320 MPCRNISS----WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEA 375
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACS--------------------------------- 245
+ F M+R G + TF+ LS C+
Sbjct: 376 LNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGM 435
Query: 246 --HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKP 300
CG DE + + + ++ + ++ R G QA L SM GVKP
Sbjct: 436 YFKCGSTDEANDVFEGIEE-----KDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKP 490
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELK-----AQESGDYVLLLNLYSSVGDWEKV 355
D +L AC H L +R E+ + S Y +++L G E+
Sbjct: 491 DEITMVGVLSAC---SHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEA 547
Query: 356 KELREFMNEKGLQTTPGCSTIG 377
+ L + + PG ++ G
Sbjct: 548 ENLM-----RNMPFDPGAASWG 564
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA KLFD +P++D V+WN ++S Y +N +A +F+ + S ++ +L A
Sbjct: 126 EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNS------ISWNGLLAA 179
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
H G L K R + E ++ N L+ Y K LG A ++F MP +DV+SW
Sbjct: 180 YVHNGRL----KEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISW 235
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MISG A G A F VF T+T ++S G+VDE + D M
Sbjct: 236 NTMISGYAQVGDLSQAKRLFNESPIRDVF----TWTAMVSGYVQNGMVDEARKYFDEMPV 291
Query: 263 D------------------------FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F +P NI + ++ G+ G + QA +L M
Sbjct: 292 KNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMM 351
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ D W ++ + H E + +E+K
Sbjct: 352 PQR-DCVSWAAIISGYAQNGHY---EEALNMFVEMK 383
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 51/226 (22%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++F+ +P+R +V++N +IS Y+RN + A LFD + +
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERD----------------- 107
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ N ++ Y + LG A ++F MP+KDVVSW+
Sbjct: 108 ------------------------LFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWN 143
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AM+SG A NG +A E F M + ++ G+L+A H G + E + S
Sbjct: 144 AMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQSN- 198
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + C++ + +L A QL M V+ D W T++
Sbjct: 199 ----WELISWNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMI 239
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 60/321 (18%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D V WN IS ++RN AL +F+++ R S
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVS------------------------- 79
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
N++I+ Y + +A ++F MPE+D+ SW+ M++G N
Sbjct: 80 ----------------YNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRR 123
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
+A + F M + V ++ +LS + G VDE ++M I N G
Sbjct: 124 LGEAHKLFDLMPKKDVV----SWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWN----G 175
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
+ + G L +A +L S + W L+G K LG+ + + +
Sbjct: 176 LLAAYV-HNGRLKEARRLFESQS-NWELISWNCLMGG--YVKRNMLGD-ARQLFDRMPVR 230
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPR 394
+ + +++ Y+ VGD + K L NE ++ + + + G V +VD+ +
Sbjct: 231 DVISWNTMISGYAQVGDLSQAKRL---FNESPIRDVFTWTAM-VSGYVQNGMVDE-ARKY 285
Query: 395 INEIYQMLDEINKQLKIAGYV 415
+E+ + +EI+ +AGYV
Sbjct: 286 FDEM-PVKNEISYNAMLAGYV 305
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 304/505 (60%), Gaps = 7/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS ++ L M + + N + S ++ C + +H ++++G
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEG 189
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+++ + +A +FDE+ D + WN +I + +N R+ AL LF
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T VL+AC L LE G + H +I + Y + L N+L+ MY K
Sbjct: 250 RMKR--AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCK 305
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF M E+DV++WS MISGLA NG+ ++A++ F M+ +G P+ T GV
Sbjct: 306 CGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGV 365
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G + M K +GI P HYGC++DLLG+AG LD A +L+ M +P
Sbjct: 366 LFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEP 425
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ WRTLLGACR+ +++ L E + +I L +++G Y LL N+Y++ W+ V+E+R
Sbjct: 426 DAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRT 485
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PGCS I + +H F++ D SHP+I E+ + L+++ +L GYV E
Sbjct: 486 RMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNF 545
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L E+ ++L +HSEKLA+AFG++ P IR+ KNLRIC DCH F K+ S +
Sbjct: 546 VLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEI 605
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++IR +R+HHF++G+CSC DYW
Sbjct: 606 RSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 15/278 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
IKCC+ ++ G I + +G++ L+ L+++Y F +A +LFD++PQR+
Sbjct: 68 IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++W +IS Y + + + AL L + R+ +P+ T VL++C + + +H
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRD--NVRPNVYTYSSVLRSCNGMSDVRM---LH 182
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I + G S + + ++LI +++K G A VF M D + W+++I G A N
Sbjct: 183 CGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHY 273
A+E F M+RAG + T T VL AC+ L++ GM + + + +D IL N
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL-ILNN---- 297
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+VD+ + G L+ A ++ M + D W T++
Sbjct: 298 -ALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISG 333
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 100 NVLISCYIRNQRTRD---ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+L+S + R RD A+ D+L + G D T +++ C A+ G I
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSL--QSHGLWADSATYSELIKCCISNRAVHEGNLIC 84
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
R++ +G+ M L N LI MY K L A ++F MP+++V+SW+ MIS + +
Sbjct: 85 RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACS--------HCGLVDEGMMFLDRMSKDFGILP 268
A+E M R V P+ T++ VL +C+ HCG++ EG+
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE------------S 192
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++ ++D+ + G + A + M V D+ +W +++G
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGG 234
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 295/538 (54%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
M+ Y +E L KMR I + + I C S G Q+HA +L++
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE 319
Query: 60 ---GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ + L+ LY K EA K+F +P R+ + WN ++S Y+ R +A
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 117 CLFDNLNREE-----------------------------SGCKPDDVTCLLVLQACAHLG 147
F+ + + G +P D L AC+ LG
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
ALE G ++H + GY S +++ N++I+MY+KCG + A VF MP D+VSW++MI+
Sbjct: 440 ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIA 499
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +GHG AIE F M + GVFPD TF VL+ACSH GLV++G + + M + +GI
Sbjct: 500 ALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P HY +VDL RAG+ A +I SM KP + +W LL CRIH ++ LG E
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L +L Q G YVLL N+Y+ VG W V ++R+ M ++ ++ P CS I ++ VH F+V
Sbjct: 620 LFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMV 679
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
DD HP + +Y+ L+++ ++K GY+ + LH++ E+K +ALS HSEKLA+ FG+
Sbjct: 680 DDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGI 739
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ PP T+RV KN+RIC DCHN K +S V RE+I+RDR RFHHF+ G CSC DYW
Sbjct: 740 MKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 181/438 (41%), Gaps = 80/438 (18%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
M+ Y+ + LF MR+ + F + + + F Q+H V++
Sbjct: 118 MITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKT 177
Query: 60 GYQ-LDSQLMTTLMDLYSTFEKSF--------EACKLFDEIPQRDTVAWNVLISCYIRNQ 110
G + S ++ L+ +Y A KLFDE+P+RD + W +I+ Y+RN
Sbjct: 178 GMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRND 237
Query: 111 RTRDALCLFDNLNR-------------------EES----------GCKPDDVTCLLVLQ 141
A +F+ + +E+ G + DD+T ++
Sbjct: 238 DLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIIS 297
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLC----NSLIAMYSKCGSLGMAFEVFKGMPEK 197
ACA++G+ + G+++H YI ++ + C N+LI +Y K + A ++F MP +
Sbjct: 298 ACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR 357
Query: 198 DVVSWSA-------------------------------MISGLAMNGHGRDAIESFGAMQ 226
++++W+A MISGLA NG G + ++ F M+
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
G P D F G L+ACS G ++ G ++ G ++ ++ + + G++
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVH-LGYESSLSVGNAMISMYAKCGVV 476
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNL 345
+ A + +M D W +++ A H H G + IE + LK D + L +
Sbjct: 477 EAAESVFVTMP-SVDLVSWNSMIAALGQHGH---GVKAIELFDQMLKEGVFPDRITFLTV 532
Query: 346 YSSVGDWEKVKELREFMN 363
++ V++ R + N
Sbjct: 533 LTACSHAGLVEKGRHYFN 550
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+LI Y G+L + E+F G P +D V ++AMI+G A NG G A+E F AM+R
Sbjct: 83 TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 230 VFPDDQTFTGVLSACS------------HCGLVDEGM 254
PDD TFT VLSA HC +V GM
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGM 179
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 302/536 (56%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y S + LFE+M+ + + S + C + +L G IH ++ +
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253
Query: 61 YQLDSQLMTTLMDLYST----------FEKSF---------------------EACKLFD 89
+D L + L+ +Y++ FEK A +F+
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++ ++D V W+ +IS Y + ++AL LF+ + + G KPD VT L V+ ACAHLGAL
Sbjct: 314 QMVKKDLVCWSAMISGYAESDSPQEALNLFNEM--QSLGIKPDQVTMLSVITACAHLGAL 371
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ + IH ++ ++G+G + + N+LI MY+KCGSL A +F MP K+V+SW+ MIS
Sbjct: 372 DQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAF 431
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G A+ F M+ + P+ TF GVL ACSH GLV+EG M + I P
Sbjct: 432 AMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPK 491
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HYGC+VDL GRA LL +A +L+ +M + P+ IW +L+ ACR+H + LGE + L+
Sbjct: 492 HVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLL 551
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL G +V L N+Y+ WE V ++R+ M KG+ GCS L +HEF+V D
Sbjct: 552 ELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVAD 611
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SH +EIY+ L E+ +LK+ GY S L +L EEK + +HSEKLA+ +G++
Sbjct: 612 RSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMR 671
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+ IR+ KNLR+C DCH F K+ S VY RE+++RDR RFHH+++G CSC DYW
Sbjct: 672 DGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 175/348 (50%), Gaps = 41/348 (11%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R S S PE+ ++E+MR + + + F+ +K + SL+ GL+IH + G+
Sbjct: 94 LRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF 153
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D + T L+ +Y+ + EA +FD++ RD V W+++I Y ++ DAL LF+
Sbjct: 154 DSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEE 213
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ + +PD++ VL AC G L +G+ IH +I E+ +L ++L+ MY+ C
Sbjct: 214 M--KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASC 271
Query: 182 GSLGMA---FE----------------------------VFKGMPEKDVVSWSAMISGLA 210
GS+ +A FE VF M +KD+V WSAMISG A
Sbjct: 272 GSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYA 331
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGIL 267
+ ++A+ F MQ G+ PD T V++AC+H G +D+ +F+D+ FG
Sbjct: 332 ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDK--NGFGGA 389
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
I++ ++++ + G L++A ++ M K + W ++ A +H
Sbjct: 390 LPINN--ALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMISAFAMH 434
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+HA++LR + L+ L+ S + A +F+ IP+ +T N + R+
Sbjct: 41 QVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRS 100
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ L +++ + + G D + +L+A + + +L G +IH ++ G+ S
Sbjct: 101 EEPEKTLLVYERMRTQ--GLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPF 158
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ L+ MY+ CG + A +F M +DVV+WS MI G +G DA+ F M+
Sbjct: 159 VQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYN 218
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V PD+ + VLSAC G + G M D + ++ I+ + H +V + G +D A
Sbjct: 219 VEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMEN-NIVVDPHLQSALVTMYASCGSMDLA 277
Query: 290 YQLITSMGVK 299
L M K
Sbjct: 278 LNLFEKMTPK 287
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V ++ + F++M + N S A+ C + +L G +IH VLR+
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L + + + L+ +YS + AC +F E+ RD V WN +IS ++ R+ +AL L
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLR 589
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+N S + + VT + L AC+ L AL G++IH++I G + + NSLI MY +
Sbjct: 590 EMNL--SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGR 647
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ + +F MP++D+VSW+ MIS M+G G DA+ F + G+ P+ TFT +
Sbjct: 648 CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNL 707
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL++EG + M ++ + P + Y C+VDLL RAG ++ + I M +P
Sbjct: 708 LSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP 767
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W +LLGACRIH + L E +L EL+ Q SG+YVL+ N+YS+ G WE ++R
Sbjct: 768 NAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 827
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+G+ PGCS I +K +H FVV D SHP + +I ++ + +K GYV +
Sbjct: 828 LMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNF 887
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK +L HSEK+A+AFG+++T GT +R+ KNLR+C DCH+ K +S V
Sbjct: 888 VLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEK 947
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF +G CSC DYW
Sbjct: 948 RDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 141/294 (47%), Gaps = 13/294 (4%)
Query: 28 TNPFAC----SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE 83
TNP C + ++ C K +L G Q+HA+++ +G + L + L+++Y +
Sbjct: 83 TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 142
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD++ +R+ +W ++ Y + + LF + E G +PD V +AC
Sbjct: 143 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE--GVRPDHFVFPKVFKAC 200
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ L G+ ++ Y+ G+ + S++ M+ KCG + +A F+ + KDV W+
Sbjct: 201 SELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWN 260
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS-- 261
M+SG G + A++ M+ +GV PD T+ ++S + G +E + M
Sbjct: 261 IMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGL 320
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
KDF PN+ + ++ + G +A + M GVKP+S + + AC
Sbjct: 321 KDFK--PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 166/424 (39%), Gaps = 79/424 (18%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM--TT 70
E +F KM + + N + A+ C L G +IH ++ +LDS L+ +
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV-EELDSDLLVGNS 403
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE----- 125
L+D Y+ A + F I Q D V+WN +++ Y +A+ L + +
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 126 ----------------------------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
G P+ T L AC + L+ G++IH
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
Y+ + + ++LI+MYS C SL +A VF + +DVV W+++IS A +G +
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACS----------------HCGLVDEGMMFLDRMS 261
A++ M + V + T L ACS CGL D L+ +
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL-DTCNFILNSLI 642
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLD------------------QAYQLITSMGVKPDST 303
+G +I + DL+ + L+ +Q +MG+KP+
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHI 702
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD-----YVLLLNLYSSVGDWEKVKEL 358
+ LL AC H L E ++ +K + + D Y +++L S G + + E
Sbjct: 703 TFTNLLSAC---SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759
Query: 359 REFM 362
E M
Sbjct: 760 IEKM 763
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-----QRDTVAWNVLISCYIRNQRTRD 114
G + D ++ Y+ + EA K F E+ + + V+W LI+ +N +
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNS 173
AL +F + E G KP+ +T + AC +L L G +IH Y I S + + NS
Sbjct: 346 ALSVFRKMVLE--GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+ Y+KC S+ +A F + + D+VSW+AM++G A+ G +AIE M+ G+ PD
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
T+ G+++ + G + F RM
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMH-------------------------------- 491
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGER----VIEHLIELKAQESGDYVLLLNLYS 347
SMG+ P++T L AC +++ LG+ V+ + IEL +G L+++YS
Sbjct: 492 -SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS---TGVGSALISMYS 545
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 151/370 (40%), Gaps = 44/370 (11%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF M + + + F K C + + G ++ +L G++ +S + ++
Sbjct: 172 EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSI 231
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL-CLFDNLNREESGCK 130
+D++ + A + F+EI +D WN+++S Y + AL C+ D + SG K
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISD---MKLSGVK 288
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD VT ++ A G E K Y E G +
Sbjct: 289 PDQVTWNAIISGYAQSGQFEEASK---YFLEMG-----------------------GLKD 322
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
FK +VVSW+A+I+G NG+ +A+ F M GV P+ T +SAC++ L+
Sbjct: 323 FK----PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLL 378
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
G K + ++ +VD + ++ A + M + D W +L
Sbjct: 379 RHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLA 437
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVL----LLNLYSSVGDWEKVKELREFMNEKG 366
+ E IE L E+K Q ++ L+ ++ GD + E + M+ G
Sbjct: 438 GYALRGS---HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMG 494
Query: 367 LQTTPGCSTI 376
+ P +TI
Sbjct: 495 MD--PNTTTI 502
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 300/505 (59%), Gaps = 6/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+++S ++ LF +MR+ + N ++ C +L G+ +H ++ G
Sbjct: 84 LLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFG 143
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+DS + L+ +Y + KLFDE+P++ + WN +I+ Y +N + L L+
Sbjct: 144 LDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYK 203
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G PD +T + VL +CAHLGAL G+++ R + G+ S L N+L+ MY++
Sbjct: 204 EM--ESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYAR 261
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A ++F GMP K VVSW+A+I G M+G G A+ F M R G+ PD F V
Sbjct: 262 CGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSV 321
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL ++G+ + M + +G+ P HY C+VDLLGRAG L++A +LI SM V+
Sbjct: 322 LSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRA 381
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IH++V L E E +IEL+ +G YVLL N+Y+ G+ E + +R
Sbjct: 382 DGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRM 441
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ L+ PGCS + KG VH F D +HP+ NEIY+ L+E+ +K +
Sbjct: 442 LMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKKNDH 501
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
E EE N++ HSEKLA+AF +L T T I + KNLRIC DCH F K++S + +
Sbjct: 502 ERR----EEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVD 557
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+ ++RD RFHHF+ G CSC +YW
Sbjct: 558 RQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 159/325 (48%), Gaps = 7/325 (2%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N F FAIK C + G Q+H V + G L+ + T+L+ +Y A KLF
Sbjct: 9 NAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLF 68
Query: 89 DEIPQ--RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
DE PQ + TV +N L+S Y N R +D + LF + E G + + VT L ++Q C
Sbjct: 69 DENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEM--RELGVEINGVTMLGLVQPCGIP 126
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G L G +H + + G ++ N L+ MY K G + ++F MP K +++W+AMI
Sbjct: 127 GNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMI 186
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+G A NG + +E + M+ G PD T GVLS+C+H G + G ++R + FG
Sbjct: 187 NGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKE-VERKMEGFGF 245
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
N +V++ R G L +A + M VK + W ++G +H + + +
Sbjct: 246 SSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVS-WTAIIGGYGMHGQGEVAVGLFD 304
Query: 327 HLIELKAQESGD-YVLLLNLYSSVG 350
+I + G +V +L+ S G
Sbjct: 305 EMIRGGIKPDGTAFVSVLSACSHAG 329
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 11/251 (4%)
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
SG P+ T +++CA L G+++H ++ + G + + SLI+MY KC +
Sbjct: 4 SGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDN 63
Query: 187 AFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A ++F P+ K V +++++SG A+N +D + F M+ GV + T G++ C
Sbjct: 64 ARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPC 123
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
G + GM + FG+ + C++ + ++G +D +L M K T
Sbjct: 124 GIPGNLGLGMC-VHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLIT- 181
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSS---VGDWEKVKELRE 360
W ++ + L V+E E++++ D + L+ + SS +G KE+
Sbjct: 182 WNAMING---YAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238
Query: 361 FMNEKGLQTTP 371
M G + P
Sbjct: 239 KMEGFGFSSNP 249
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/507 (41%), Positives = 304/507 (59%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS E +LF +M + N F + + C F G QIH+ + +
Sbjct: 82 MISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRN 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + ++L+D+Y+ + EA +F+ +P+RD V+ +IS Y + +AL LF
Sbjct: 142 YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFC 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L RE G + VT +L A + L AL+ G+++H ++ + L NSLI MYSK
Sbjct: 202 RLQRE--GMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSK 259
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTG 239
CG+L A ++F MP + V+SW+AM+ G + +G G + ++ F M+ V PD TF
Sbjct: 260 CGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLA 319
Query: 240 VLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH GL D+G+ MF + M+ I I HYGCV+DLLGRAG +++A++LI M
Sbjct: 320 VLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPF 379
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + IW +LLGACR+H + +GE V L+E++ + +G+YV+L NLY+S G WE V+ +
Sbjct: 380 EPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNV 439
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M EK + PG S I L +H F D SHPR E++ + E+ + K +GYV +
Sbjct: 440 RELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQ 499
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+AFG+++T G +RV KNLRICVDCHNFAK +S V
Sbjct: 500 SCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKV 559
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y R+V IRD+ RFHH G CSC DYW
Sbjct: 560 YGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 144/274 (52%), Gaps = 12/274 (4%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C+ ++ G ++HA +++ Y L T L+ LY+ E A +FDE+ +R+ V+W
Sbjct: 20 CVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSW 79
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+IS Y + +AL LF + R ++ +P++ T VL +C E G +IH +I
Sbjct: 80 TAMISGYSQRGFASEALHLFVQMLRSDT--EPNEFTFATVLSSCTGFSGFELGRQIHSHI 137
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ Y + + + +SL+ MY+K G + A VF+ +PE+DVVS +A+ISG A G +A+
Sbjct: 138 FKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAL 197
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK----DFGILPNIHHYGC 275
E F +QR G+ + T+ +L+A S +D G + + + +L N
Sbjct: 198 ELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN-----S 252
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++D+ + G L+ A ++ +M V+ + W +L
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVIS-WNAML 285
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
++L C + A+ G+++H ++ + Y + L LI +Y+KC LG A VF M E+
Sbjct: 15 MLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRER 74
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+VVSW+AMISG + G +A+ F M R+ P++ TF VLS+C+
Sbjct: 75 NVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCT 122
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 294/505 (58%), Gaps = 10/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + ++ F LF M +K N + S I ++ L +++ V
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYKNVGMKS 228
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ ++T Y F K A ++F + ++ V WN +I+ Y+ N R D L +F
Sbjct: 229 VVVETAMLTG----YMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ES +P+ ++ VL C++L AL G ++H+ +S+ C SLI+MY K
Sbjct: 285 TM--IESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCK 342
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A+++F MP KDV++W+AMISG A +G GR A+ F M+ + PD TF V
Sbjct: 343 CGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAV 402
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+H G VD G+ + M K+FGI HY CV+DLLGRAG LD+A LI M P
Sbjct: 403 ILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTP 462
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ I+ TLLGACRIHK++ L E +L+ L + YV L N+Y++ W++V ++R+
Sbjct: 463 HAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRK 522
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E + PG S I +K V HEF D HP + I++ L+E++ ++K+AGYV ++
Sbjct: 523 MMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEF 582
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E K L +HSEKLAIAFG++ T PGT IRV KNLR+C DCH K +S +
Sbjct: 583 ALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEK 642
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHFR G CSC DYW
Sbjct: 643 REIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 52/290 (17%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +LFD+IP+ D+V++N+++ CY+R+ + AL F+ + ++
Sbjct: 123 EAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIAS------------- 169
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
N+LI+ +++ G + AF++F MPEK+ VSW
Sbjct: 170 ----------------------------WNTLISGFAQNGQMQKAFDLFSVMPEKNGVSW 201
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
SAMISG +G A E + + V + TG + G V+ RM+
Sbjct: 202 SAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMK----FGKVELAERIFQRMAV 257
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+ N G V + GL + ++ + V+P+ ++L C + LG
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGL--KVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR 315
Query: 323 RVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQT 369
++ H + K+ S D L+++Y GD + +L M K + T
Sbjct: 316 QM--HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVIT 363
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 292/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E F +F +R++ + N + +K + Q+HA + G+ D+ ++ L
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D Y +A ++F+E D +A +I+ + A+ LF + R+ G +P
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK--GLEP 503
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +L ACA L A E G+++H ++ + + S N+L+ Y+KCGS+ A F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+PE+ VVSWSAMI GLA +GHG+ A+E FG M G+ P+ T T VL AC+H GLVD
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M + FGI HY C++DLLGRAG LD A +L+ SM + ++++W LLGA
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 683
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
R+HK LG+ E L L+ ++SG +VLL N Y+S G W +V ++R+ M + ++ P
Sbjct: 684 SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEP 743
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
S + +K VH F+V D SHP EIY LDE+ + AGY+ + +LH+L EK
Sbjct: 744 AMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKE 803
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
LS+HSE+LA+AF +L+TPPG IRV KNLRIC DCH K +S + +RE+IIRD RF
Sbjct: 804 LLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRF 863
Query: 492 HHFREGRCSCNDYW 505
HHFR+G CSC DYW
Sbjct: 864 HHFRDGTCSCGDYW 877
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 153/313 (48%), Gaps = 8/313 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AYS + P F MR + + N FA +KC G Q+HA + G
Sbjct: 74 LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + L+ +Y F +A ++FDE +R+ V+WN L+S Y++N + DA+ +F
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVF 190
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ SG +P + V+ AC ++ G ++H + GY + N+L+ MY
Sbjct: 191 GEM--VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYV 248
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + +A +F+ MP+ DVVSW+A+ISG +NGH AIE M+ +G+ P+ +
Sbjct: 249 KMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS 308
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L AC+ G D G M K + G +VD+ + LD A ++ M +
Sbjct: 309 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR 367
Query: 300 PDSTIWRTLLGAC 312
D +W L+ C
Sbjct: 368 -DLILWNALISGC 379
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 146/303 (48%), Gaps = 17/303 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L+ G +HA +L+ G+ + L L+ YS + A ++FDEIP V+W+ L++
Sbjct: 19 ALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVT 76
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y N R A+ F + E C + +L A LGA ++H G+
Sbjct: 77 AYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGA-----QVHAMAMATGF 131
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
GS + + N+L+AMY G + A VF + E++ VSW+ ++S N DAI+ FG
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M +G+ P + F+ V++AC+ +D G + M G ++ +VD+ +
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ-VHAMVVRMGYEKDVFTANALVDMYVKM 250
Query: 284 GLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL 341
G +D A + M PDS + W L+ C ++ H R IE L+++K+ V
Sbjct: 251 GRVDIASVIFEKM---PDSDVVSWNALISGCVLNGH---DHRAIELLLQMKSSGLVPNVF 304
Query: 342 LLN 344
+L+
Sbjct: 305 MLS 307
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 170/376 (45%), Gaps = 21/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + + +F +M I F S + C ++ G Q+HA V+R G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 232
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D L+D+Y + A +F+++P D V+WN LIS + N A+ L
Sbjct: 233 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL- 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + SG P+ +L+ACA GA + G +IH ++ + S + L+ MY+K
Sbjct: 292 -LQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A +VF M +D++ W+A+ISG + G +A F +++ G+ + T V
Sbjct: 351 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT--SMGV 298
L + + + +++ G + + H ++D + L A ++ S G
Sbjct: 411 LKSTASLEAASATRQ-VHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGD 469
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL--KAQESGDYVL--LLNLYSSVGDWEK 354
T T L C GE I+ +E+ K E +VL LLN +S+ +E+
Sbjct: 470 IIAVTSMITALSQC------DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 355 VKEL------REFMNE 364
K++ R+FM++
Sbjct: 524 GKQVHAHLIKRQFMSD 539
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 292/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E F +F +R++ + N + +K + Q+HA + G+ D+ ++ L
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D Y +A ++F+E D +A +I+ + A+ LF + R+ G +P
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK--GLEP 410
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +L ACA L A E G+++H ++ + + S N+L+ Y+KCGS+ A F
Sbjct: 411 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 470
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+PE+ VVSWSAMI GLA +GHG+ A+E FG M G+ P+ T T VL AC+H GLVD
Sbjct: 471 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 530
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M + FGI HY C++DLLGRAG LD A +L+ SM + ++++W LLGA
Sbjct: 531 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
R+HK LG+ E L L+ ++SG +VLL N Y+S G W +V ++R+ M + ++ P
Sbjct: 591 SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEP 650
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
S + +K VH F+V D SHP EIY LDE+ + AGY+ + +LH+L EK
Sbjct: 651 AMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKE 710
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
LS+HSE+LA+AF +L+TPPG IRV KNLRIC DCH K +S + +RE+IIRD RF
Sbjct: 711 LLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRF 770
Query: 492 HHFREGRCSCNDYW 505
HHFR+G CSC DYW
Sbjct: 771 HHFRDGTCSCGDYW 784
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 145/293 (49%), Gaps = 8/293 (2%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
MR + + N FA +KC G Q+HA + G+ D + L+ +Y F
Sbjct: 1 MRAEGVCCNEFALPVVLKCV---PDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 81 SFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
+A ++FDE +R+ V+WN L+S Y++N + DA+ +F + SG +P + V
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM--VWSGIQPTEFGFSCV 115
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
+ AC ++ G ++H + GY + N+L+ MY K G + +A +F+ MP+ DV
Sbjct: 116 VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 175
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
VSW+A+ISG +NGH AIE M+ +G+ P+ + +L AC+ G D G
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
M K + G +VD+ + LD A ++ M + D +W L+ C
Sbjct: 236 MIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 286
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 170/376 (45%), Gaps = 21/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + + +F +M I F S + C ++ G Q+HA V+R G
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D L+D+Y + A +F+++P D V+WN LIS + N A+ L
Sbjct: 140 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL- 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + SG P+ +L+ACA GA + G +IH ++ + S + L+ MY+K
Sbjct: 199 -LQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A +VF M +D++ W+A+ISG + G +A F +++ G+ + T V
Sbjct: 258 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 317
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT--SMGV 298
L + + + +++ G + + H ++D + L A ++ S G
Sbjct: 318 LKSTASLEAASATRQ-VHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGD 376
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL--KAQESGDYVL--LLNLYSSVGDWEK 354
T T L C GE I+ +E+ K E +VL LLN +S+ +E+
Sbjct: 377 IIAVTSMITALSQC------DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 430
Query: 355 VKEL------REFMNE 364
K++ R+FM++
Sbjct: 431 GKQVHAHLIKRQFMSD 446
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 306/534 (57%), Gaps = 30/534 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE L +++ + + + + + C +L G Q+H+ ++ G
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q +S L+ +Y A ++F + +D V+WN ++ ++N +A FD
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFD 509
Query: 121 N-LNREESG-------------------------CK---PDDVTCLLVLQACAHLGALEF 151
N L+R++ C+ P+ ++L C LGA +
Sbjct: 510 NMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKI 569
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G++IH + G S++ + N+LI+MY KCG + +F M E+D+ +W+ +I+G A
Sbjct: 570 GQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQ 628
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+G GR+AI+ + M+ AGV P++ TF G+L+ACSH GLVDEG F MS+D+G+ P
Sbjct: 629 HGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPE 688
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HY C+VDLLGR G + A Q I M ++PD+ IW LLGAC+IHK+ +G+R E L +
Sbjct: 689 HYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRI 748
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+ +G+YV+L N+YSS+G W +V E+R+ M ++G+ PGCS +K +H FV D
Sbjct: 749 EPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQ 808
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
H +I EI L+E+ LK GYV + LH++ E+K ++L YHSEKLA+A+ +LATP
Sbjct: 809 HEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATP 868
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G I++ KNLRIC DCH F K +S V R++ IRD RFHHFR G CSC D+W
Sbjct: 869 KGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 15/234 (6%)
Query: 24 KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS-- 81
+R P AC A+ + C G AR+L + Q+ ++ + L + + ++
Sbjct: 315 ERDPVKSIACRTALITGLAQC----GRIDDARILFE--QIPEPIVVSWNALITGYMQNGM 368
Query: 82 -FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
EA +LFD++P R+T++W +I+ Y +N R+ +AL L L+R SG P + +
Sbjct: 369 VNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR--SGMLPSLSSLTSIF 426
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
AC+++ ALE G ++H + G CN+LI MY KC ++ A +VF M KD+V
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
SW++ ++ L N +A +F M + DD ++T ++SA +H +E M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAM 536
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 142/314 (45%), Gaps = 17/314 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNP-FACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y + + + +F KM R+ +P FA + + + ++ L++ A L+
Sbjct: 195 MISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA--LK 252
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G++ D + T ++++YS + A K F+ + +R+ W+ +I+ R A+
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+++ + C+ +T L A G ++ + I E S N+LI
Sbjct: 313 VYERDPVKSIACRTALITGL------AQCGRIDDARILFEQIPEPIVVS----WNALITG 362
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y + G + A E+F MP ++ +SW+ MI+G A NG +A+ + R+G+ P +
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
T + ACS+ ++ G + ++ G N ++ + G+ ++ A Q+ + M
Sbjct: 423 TSIFFACSNIVALETGTQ-VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM- 480
Query: 298 VKPDSTIWRTLLGA 311
V D W + L A
Sbjct: 481 VTKDIVSWNSFLAA 494
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 54/261 (20%)
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ Y + EA ++FD + +R+TVAWN +ISCY++N A LFD +
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM-------P 154
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM--AF 188
DV+ NS++ Y C SL M A
Sbjct: 155 SRDVSSW----------------------------------NSMLTGY--CHSLQMVDAR 178
Query: 189 EVFKGMPEKDVVSWSAMISGLA-MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+F+ MPE+++VSW+ MISG + HG+ A + F M R G+ PD F LSA
Sbjct: 179 NLFEKMPERNLVSWTVMISGYGRIENHGK-AWDIFCKMHREGLLPDQSNFASALSAVKGL 237
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-AGLLDQAYQLITSMGVKPDSTIWR 306
G +D + L ++ G ++ ++++ R +LD A + SM ++ + W
Sbjct: 238 GNLDV-LESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-IERNEYTWS 295
Query: 307 TLLGAC----RIHKHVTLGER 323
T++ A RI + + ER
Sbjct: 296 TMIAALSHGGRIDAAIAVYER 316
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ C L+L+ C L A R+ H +G +++ C++ I + G +G A EVF
Sbjct: 1 MACRLLLRRC--LSAAAASSAAARFAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFD 58
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
MP +D+++W++MIS NG A + + A+ + +T +LS G V E
Sbjct: 59 AMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM----RTGAILLSGYGRLGRVLE 114
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL-GA 311
D M + N + ++ + G + A +L +M + D + W ++L G
Sbjct: 115 ARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARRLFDAMPSR-DVSSWNSMLTGY 168
Query: 312 C 312
C
Sbjct: 169 C 169
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/513 (40%), Positives = 303/513 (59%), Gaps = 9/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMG--GL--QIHA 54
M+R Y ++ + + LF+ + + F S + + CS + GL IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHS 207
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC--KLFDEIPQRDTVAWNVLISCYIRNQRT 112
V++ G+ + TL+D Y+ + A K+FD+I +D V++N ++S Y ++ +
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+A +F L +E+ + +T VL A +H GAL G+ IH + G + +
Sbjct: 268 NEAFDVFRRLIKEKV-VTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
S+I MY KCG + A F M K+V SW+AMI+G M+GH A+E F AM +GV P
Sbjct: 327 SIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF VL+ACSH GL D G + + M FG+ P + HYGC+VDLLGRAG L +AY L
Sbjct: 387 NYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I M ++PDS IW +LL ACRIHK+V L E + L EL G Y+LL ++Y+ G W
Sbjct: 447 IQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRW 506
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+ V+ +R M +GL PG S + L G VH F++ D HP+ +IY+ L E+N++L A
Sbjct: 507 KDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV+ +S H++ EEK L HSEKLAIAFG++ T PG+T+ V KNLR+C DCHN
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + +RE ++RD RFHHF++G CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+ + DV SW+++I+ LA +G +A+ +F +M++ ++P +F + ACS
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACS 87
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 306/534 (57%), Gaps = 30/534 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE L +++ + + + + + C +L G Q+H+ ++ G
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q +S L+ +Y A ++F + +D V+WN ++ ++N +A FD
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFD 509
Query: 121 N-LNREESG-------------------------CK---PDDVTCLLVLQACAHLGALEF 151
N L+R++ C+ P+ ++L C LGA +
Sbjct: 510 NMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKI 569
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G++IH + G S++ + N+LI+MY KCG + +F M E+D+ +W+ +I+G A
Sbjct: 570 GQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQ 628
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+G GR+AI+ + M+ AGV P++ TF G+L+ACSH GLVDEG F MS+D+G+ P
Sbjct: 629 HGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPE 688
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HY C+VDLLGR G + A Q I M ++PD+ IW LLGAC+IHK+ +G+R E L +
Sbjct: 689 HYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRI 748
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+ +G+YV+L N+YSS+G W +V E+R+ M ++G+ PGCS +K +H FV D
Sbjct: 749 EPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQ 808
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
H +I EI L+E+ LK GYV + LH++ E+K ++L YHSEKLA+A+ +LATP
Sbjct: 809 HEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATP 868
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G I++ KNLRIC DCH F K +S V R++ IRD RFHHFR G CSC D+W
Sbjct: 869 KGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 15/234 (6%)
Query: 24 KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS-- 81
+R P AC A+ + C G AR+L + Q+ ++ + L + + ++
Sbjct: 315 ERDPVKSIACRTALITGLAQC----GRIDDARILFE--QIPEPIVVSWNALITGYMQNGM 368
Query: 82 -FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
EA +LFD++P R+T++W +I+ Y +N R+ +AL L L+R SG P + +
Sbjct: 369 VNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR--SGMLPSLSSLTSIF 426
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
AC+++ ALE G ++H + G CN+LI MY KC ++ A +VF M KD+V
Sbjct: 427 FACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV 486
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
SW++ ++ L N +A +F M + DD ++T ++SA +H +E M
Sbjct: 487 SWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAM 536
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 142/314 (45%), Gaps = 17/314 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNP-FACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y + + + +F KM R+ +P FA + + + ++ L++ A L+
Sbjct: 195 MISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA--LK 252
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G++ D + T ++++YS + A K F+ + +R+ W+ +I+ R A+
Sbjct: 253 TGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIA 312
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+++ + C+ +T L A G ++ + I E S N+LI
Sbjct: 313 VYERDPVKSIACRTALITGL------AQCGRIDDARILFEQIPEPIVVS----WNALITG 362
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y + G + A E+F MP ++ +SW+ MI+G A NG +A+ + R+G+ P +
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
T + ACS+ ++ G + ++ G N ++ + G+ ++ A Q+ + M
Sbjct: 423 TSIFFACSNIVALETGTQ-VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM- 480
Query: 298 VKPDSTIWRTLLGA 311
V D W + L A
Sbjct: 481 VTKDIVSWNSFLAA 494
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 54/261 (20%)
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ Y + EA ++FD + +R+TVAWN +ISCY++N A LFD +
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM-------P 154
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM--AF 188
DV+ NS++ Y C SL M A
Sbjct: 155 SRDVSSW----------------------------------NSMLTGY--CHSLQMVDAR 178
Query: 189 EVFKGMPEKDVVSWSAMISGLA-MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+F+ MPE+++VSW+ MISG + HG+ A + F M R G+ PD F LSA
Sbjct: 179 NLFEKMPERNLVSWTVMISGYGRIENHGK-AWDIFCKMHREGLLPDQSNFASALSAVKGL 237
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-AGLLDQAYQLITSMGVKPDSTIWR 306
G +D + L ++ G ++ ++++ R +LD A + SM ++ + W
Sbjct: 238 GNLDV-LESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-IERNEYTWS 295
Query: 307 TLLGAC----RIHKHVTLGER 323
T++ A RI + + ER
Sbjct: 296 TMIAALSHGGRIDAAIAVYER 316
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ C ++L+ C L A R+ H +G +++ C++ I + G +G A EVF
Sbjct: 1 MACRVLLRRC--LSAAAASSAAARFAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFD 58
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
MP +D+++W++MIS NG A + + A+ + +T +LS G V E
Sbjct: 59 AMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM----RTGAILLSGYGRLGRVLE 114
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL-GA 311
D M + N + ++ + G + A +L +M + D + W ++L G
Sbjct: 115 ARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARRLFDAMPSR-DVSSWNSMLTGY 168
Query: 312 C 312
C
Sbjct: 169 C 169
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/533 (38%), Positives = 295/533 (55%), Gaps = 30/533 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + LF M + + + + C+ +L Q+HA+ G
Sbjct: 331 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHG 390
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNV------------------- 101
+ + L+ YS + +A LFD + RD+V+W+V
Sbjct: 391 MLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFR 450
Query: 102 -LISCYIRNQR--------TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
LI C R ++L LFD + E G PD V + V+ ACA LGA+
Sbjct: 451 ELIRCGARPDNYTLPFCGNANESLVLFDKM--REEGVVPDKVAMVTVVFACAKLGAMHKA 508
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
I YI + + L ++I M++KCG + A E+F M EK+V+SWSAMI+ +
Sbjct: 509 RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 568
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G GR A++ F M R+G+ P+ T +L ACSH GLV+EG+ F M +D+ + ++ H
Sbjct: 569 GQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKH 628
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
Y CVVDLLGRAG LD+A +LI SM V+ D +W LGACR HK V L E+ L+EL+
Sbjct: 629 YTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQ 688
Query: 333 AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSH 392
Q G Y+LL N+Y++ G WE V + R+ M+++ L+ PG + I + H+F V D +H
Sbjct: 689 PQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTH 748
Query: 393 PRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPP 452
PR EIY+ML + +L++ GYV + LH++ E K L HSEKLAIAFG++ATP
Sbjct: 749 PRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPE 808
Query: 453 GTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T IR+ KNLR+C DCH F K++S + R +I+RD RFHHF+EG CSC DYW
Sbjct: 809 HTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 126/246 (51%), Gaps = 4/246 (1%)
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
L L+D+Y + +A LFD++ +RD V W V+I Y + ++L LF+ +
Sbjct: 194 NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM--R 251
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
E G PD V + V+ ACA LGA+ I YI + + L ++I MY+KCG +
Sbjct: 252 EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVE 311
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A E+F M EK+V+SWSAMI+ +G GR A++ F M +G+ PD T +L AC
Sbjct: 312 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACI 371
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+C + + + + + G+L N+ +V LD AY L M V+ DS W
Sbjct: 372 NCRNLTQ-VRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVR-DSVSW 429
Query: 306 RTLLGA 311
++G
Sbjct: 430 SVMVGG 435
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 163/369 (44%), Gaps = 14/369 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LFEKMR++ + + A + C K ++ I + R
Sbjct: 230 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 289
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QLD L T ++D+Y+ A ++FD + +++ ++W+ +I+ Y + + R AL LF
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG PD +T +L AC + L ++H S HG + + N L+ YS
Sbjct: 350 MM--LSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSY 407
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
+L A+ +F GM +D VSWS M+ G A G + +F + R G PD+ T
Sbjct: 408 YRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTL--- 464
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
CG +E ++ D+M ++ G++P+ VV + G + +A + + K
Sbjct: 465 ----PFCGNANESLVLFDKMREE-GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 519
Query: 301 DSTIWRTLLGACRIHKHVTLG--ERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+LG I H G E E ++ + + ++ Y G K +L
Sbjct: 520 FQL--DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 577
Query: 359 REFMNEKGL 367
M G+
Sbjct: 578 FPMMLRSGI 586
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA+ G + + L+ YS + +A LFD + RD+V+W+V++ + +
Sbjct: 99 QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 158
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ F L R G +PD+ T V++AC L NL
Sbjct: 159 DYINCFGTFRELIR--CGARPDNYTLPFVIRACRDLK---------------------NL 195
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+L+ MY KC + A +F M E+D+V+W+ MI G A G +++ F M+ GV
Sbjct: 196 QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV 255
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD V+ AC+ G + + + D + + L I ++D+ + G ++ A
Sbjct: 256 VPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA-MIDMYAKCGCVESAR 314
Query: 291 QLITSMGVKPDSTIWRTLLGACRIH 315
++ M K + W ++ A H
Sbjct: 315 EIFDRMEEK-NVISWSAMIAAYGYH 338
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 38/272 (13%)
Query: 123 NREESGCKPDDVTCL---LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
NREE K + L + A + L ++H S HG + + N LI YS
Sbjct: 65 NREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYS 124
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+L A+ +F GM +D VSWS M+ G A G + +F + R G PD+ T
Sbjct: 125 YYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPF 184
Query: 240 VLSACS--------------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
V+ AC C +++ D+M + ++ + ++ G
Sbjct: 185 VIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQE-----RDLVTWTVMIGGYAECGK 239
Query: 286 LDQAYQLITSM---GVKPDSTIWRTLLGAC----RIHKHVTLGERVIEHLIELKAQESGD 338
+++ L M GV PD T++ AC +HK R+I+ I+ K + D
Sbjct: 240 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHK-----ARIIDDYIQRKKFQL-D 293
Query: 339 YVL---LLNLYSSVGDWEKVKELREFMNEKGL 367
+L ++++Y+ G E +E+ + M EK +
Sbjct: 294 VILGTAMIDMYAKCGCVESAREIFDRMEEKNV 325
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/492 (39%), Positives = 304/492 (61%), Gaps = 4/492 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R Y+ + F L+ +MR + + F IK + G IH+ V+R
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + +L+ LY+ A K+FD++P++D VAWN +I+ + N + +AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+N + G KPD T + +L ACA +GAL G+++H Y+ + G ++ N L+ +Y+
Sbjct: 211 TEMNSK--GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFT 238
+CG + A +F M +K+ VSW+++I GLA+NG G++AIE F M+ G+ P + TF
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+L ACSHCG+V EG + RM +++ I P I H+GC+VDLL RAG + +AY+ I SM +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P+ IWRTLLGAC +H L E +++L+ SGDYVLL N+Y+S W V+++
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G++ PG S + + VHEF++ D SHP+ + IY L E+ +L+ GYV +I
Sbjct: 449 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 508
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
++ ++ EEK NA+ YHSEK+AIAF +++TP + I V KNLR+C DCH K++S V
Sbjct: 509 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 568
Query: 479 YNREVIIRDRLR 490
YNRE+++RDR R
Sbjct: 569 YNREIVVRDRSR 580
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 305/506 (60%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSS-PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ AY+ S +E LF KM I N F+ S +K C G Q+++ ++
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + +L+ +Y+ + +A K FD + +++ V++N ++ Y +N ++ +A LF
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + ++G T +L A +GA+ GE+IH + + GY S +CN+LI+MYS
Sbjct: 251 NEI--ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG++ AF+VF M +++V+SW++MI+G A +G A+E F M G P++ T+
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH G++ EG + M K+ GI+P + HY C+VDLLGR+GLL +A + I SM +
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D+ +WRTLLGACR+H + LG E ++E + + Y+LL NL++S G W+ V ++R
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 488
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E+ L GCS I ++ VH F V + SHP+ +IYQ LD++ ++K GY+ +
Sbjct: 489 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 548
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K L HSEK+A+AFG+++T IR+ KNLR+C DCH K +S
Sbjct: 549 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 608
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHH + G CSCNDYW
Sbjct: 609 GREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 167/355 (47%), Gaps = 9/355 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ + LF M + F S + C + L G Q+H+RV+R G
Sbjct: 27 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 86
Query: 61 YQLDSQLMTTLMDLYSTFEKSF---EACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDAL 116
LD + +L+D+Y+ ++ K+F+++P+ + ++W +I+ Y ++ ++A+
Sbjct: 87 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAI 146
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + +P+ + VL+AC +L GE+++ Y + G S + NSLI+
Sbjct: 147 ELFCKMI--SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 204
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY++ G + A + F + EK++VS++A++ G A N +A F + G+ T
Sbjct: 205 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 264
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F +LS + G + +G R+ K G N ++ + R G ++ A+Q+ M
Sbjct: 265 FASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEM 323
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVG 350
+ + W +++ H T + ++E + + YV +L+ S VG
Sbjct: 324 EDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 377
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FD++P+R+ V W ++I+ + + RDA+ LF L+ E SG PD T VL AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLF--LDMELSGYVPDRFTYSSVLSAC 66
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC---GSLGMAFEVFKGMPEKDVV 200
LG L G+++H + G + + SL+ MY+KC GS+ + +VF+ MPE +V+
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126
Query: 201 SWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
SW+A+I+ A +G ++AIE F M + P+ +F+ VL AC +
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 173
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A++VF MPE+++V+W+ MI+ A G RDAI+ F M+ +G PD T++ VLSAC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 247 CGLVDEGMMF-------------------------------LDRMSKDFGILP--NIHHY 273
GL+ G +D K F +P N+ +
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 274 GCVVDLLGRAGLLD-QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
++ ++G D +A +L M ++P+ + ++L AC GE+V + +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 330 ELK-AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+L A + L+++Y+ G E ++ + + EK L
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 227
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/481 (40%), Positives = 286/481 (59%), Gaps = 13/481 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDS--------QLMTTLMDLYSTFEKSFEACKLF 88
+ C+ +L+ G + H ++ LD +++ L+D+Y+ + + A K+F
Sbjct: 507 LSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMF 566
Query: 89 DEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
D + RD V W V+I Y ++ +AL LF + + + KP+D T L ACA L
Sbjct: 567 DSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARL 626
Query: 147 GALEFGEKIHRYISEHGYGSKM-NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
AL FG ++H Y+ + YGS M + N LI MYSK G + A VF MP+++ VSW+++
Sbjct: 627 AALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSL 686
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
++G M+G G DA+ F M++ + PD TF VL ACSH G+VD G+ F +RMSKDFG
Sbjct: 687 MTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFG 746
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ P HY C+VDL GRAG L +A +LI M ++P +W LL ACR+H +V LGE
Sbjct: 747 VDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAA 806
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI-GLKGVVHE 384
L+EL++ G Y LL N+Y++ W+ V +R M G++ PGCS I G KGV
Sbjct: 807 NRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVA-T 865
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F V D SHP+ +IY+ L ++ +++K GYV + + LH++ EEKG+ L HSEKLA+A
Sbjct: 866 FYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALA 925
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
+G+L P IR+ KNLRIC DCH+ +S + E+I+RD RFHHF+ G CSC Y
Sbjct: 926 YGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGY 985
Query: 505 W 505
W
Sbjct: 986 W 986
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 5/264 (1%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
SP + F L+ +M+ + + F K C SL G +HA V R G+ + +
Sbjct: 239 SPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCN 298
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
++ +Y A +FD++ R D V+WN ++S Y+ AL LF +
Sbjct: 299 AVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRH 358
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
PD ++ + +L ACA L A G ++H + G + + N+++ MY+KCG +
Sbjct: 359 L-MSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEE 417
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A +VF+ M KDVVSW+AM++G + G A+ F M + D T+T V++ +
Sbjct: 418 ANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQ 477
Query: 247 CGLVDEGMMFLDRMSKDFGILPNI 270
G E + +M D G PN+
Sbjct: 478 RGQGCEALDVFRQMC-DCGSRPNV 500
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK--DVVSWSAMISGLAMNGHGRDAIESF 222
G +L +LI Y S A + + +P V W+ +I G RD +
Sbjct: 188 GLLFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLY 247
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M+ G PD TF V AC++ + G +S+ G N+ VV + G+
Sbjct: 248 RQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRS-GFASNVFVCNAVVSMYGK 306
Query: 283 AGLLDQAYQLITSM---GVKPDSTIWRTLLGA 311
G L A+ + + G++ D W +++ A
Sbjct: 307 CGALRHAHNMFDDLCHRGIQ-DLVSWNSVVSA 337
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 300/494 (60%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EEG LF +M + + FA ++ C +L+ G Q+H V + G++ + ++++L
Sbjct: 166 EEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSL 225
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y E +L +P ++ VAWN LI+ +N + L ++ + + +G +P
Sbjct: 226 AHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMM--KMAGFRP 283
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +T + V+ +C+ L L G++IH + + G +++ +SLI+MYS+CG L + +VF
Sbjct: 284 DKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVF 343
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
DVV WS+MI+ +G G +AI+ F M++ + +D TF +L ACSHCGL +
Sbjct: 344 LECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKE 403
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G+ F D M + +G+ P + HY C+VDLLGR G +++A LI SM VK D W+TLL A
Sbjct: 404 KGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C+IHK + R+ E + L ++ YVLL N+++S W+ V ++R+ M ++ L+ P
Sbjct: 464 CKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEP 523
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + +K +H+F + D SHP+ EI L E+ ++K GYV +I S LH++ E+K
Sbjct: 524 GISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKE 583
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+L +HSEKLAIAF +L TP GT IRV KNLR+C DCH K +S + NRE+I+RD RF
Sbjct: 584 YSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRF 643
Query: 492 HHFREGRCSCNDYW 505
HHF+ GRCSC DYW
Sbjct: 644 HHFKNGRCSCGDYW 657
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 170/373 (45%), Gaps = 38/373 (10%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
I + P S ++ C+ SL G Q+H+ ++ G D + L++LYS + A
Sbjct: 48 IWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAI 107
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--------------------NRE 125
LF +P+++ ++ N+LI+ Y R+ A +FD + N E
Sbjct: 108 TLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEE 167
Query: 126 ---------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
E G PD+ VL+ CA L AL G ++H Y+ + G+ + + +SL
Sbjct: 168 GLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAH 227
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGSLG + + MP ++VV+W+ +I+G A NG+ + ++ + M+ AG PD T
Sbjct: 228 MYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKIT 287
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F V+S+CS + +G + K L + ++ + R G L+ + ++
Sbjct: 288 FVSVISSCSELATLGQGQQIHAEVIKAGASLI-VSVISSLISMYSRCGCLEYSLKVFLEC 346
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIE--HLIELKAQESGDYVLLLNLY--SSVGDW 352
D W +++ A H G I+ + +E + E+ D L LY S G
Sbjct: 347 E-NGDVVCWSSMIAAYGFHGR---GVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLK 402
Query: 353 EKVKELREFMNEK 365
EK + + M EK
Sbjct: 403 EKGIKFFDLMVEK 415
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + + PEE + M+ + I C + +L G QIHA V++ G
Sbjct: 256 LIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG 315
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L ++++L+ +YS + K+F E D V W+ +I+ Y + R +A+ LF+
Sbjct: 316 ASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFN 375
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ +E+ + +DVT L +L AC+H G E G K + E +G ++ ++ +
Sbjct: 376 QMEQEK--LEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLG 433
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ GS+ A + + MP K DV++W ++S
Sbjct: 434 RYGSVEEAEALIRSMPVKADVITWKTLLSA 463
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/422 (44%), Positives = 268/422 (63%), Gaps = 3/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD +PQRD VAW+ +I+ Y+ R+R+AL LFD + +G + T + VL AC
Sbjct: 199 ARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEM--LSAGTTVGEATLVSVLTAC 256
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A +G L+ G+ +H Y+ G + L +L+ MYSKCG++ A EVF+ M E++V +W+
Sbjct: 257 AQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWT 316
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+ +SGLAMNG G + ++ F M+ AG+ P+ +F VL CS GLVDEG D M K
Sbjct: 317 SAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDK- 375
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+G+ P HYGC+VDL GRAG LD A I M ++P +W LL A RIH V LG+
Sbjct: 376 YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKY 435
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
++ L+ ++++ +V L N+Y+ +W+ V +R M KG++ PG STI + G VH
Sbjct: 436 ALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVH 495
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
EF V HPR NEI ML E++++L++ GY A L ++ EEK A+S HSEKLA+
Sbjct: 496 EFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLAL 555
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ P IR+ KNLR+C+DCH + K++S V+NRE+++RDR RFHHF+ G CSC D
Sbjct: 556 AFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRD 615
Query: 504 YW 505
YW
Sbjct: 616 YW 617
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E LF++M + C + +L G +H V G
Sbjct: 217 MIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRG 276
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q+ +L T L+D+YS A ++F+ + +R+ W +S N + L LF
Sbjct: 277 MQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFK 336
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E +G +P+ V+ + VL+ C+ G ++ G + ++G ++ +Y +
Sbjct: 337 RM--EGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGR 394
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAM---------QR 227
G L A MP E W A+++ ++ G+ A++ A+ Q
Sbjct: 395 AGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQL 454
Query: 228 AGVFPDDQTFTGV 240
+ ++ + Q + GV
Sbjct: 455 SNIYAESQNWKGV 467
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+++A + G + A ++F GMP++D V+WSAMI+G G R+A+ F M AG
Sbjct: 184 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 243
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
+ T VL+AC+ G +D G ++ + G+ +I +VD+ + G + A +
Sbjct: 244 VGEATLVSVLTACAQIGTLDRG-KWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAME 302
Query: 292 LITSMG 297
+ SM
Sbjct: 303 VFESMA 308
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 297/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ + E L+ +M + + + F F +K C ++ G IH RV+R G
Sbjct: 130 LIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSG 189
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+D+Y+ +A +FD+I RD V WN +++ Y +N ++L L
Sbjct: 190 WERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCC 249
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G +P + T + V+ + A + L G +IH + HG+ + +LI MY+K
Sbjct: 250 EM--AAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAK 307
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A +F+ + EK VVSW+A+I+G AM+G +A++ F M + PD TF G
Sbjct: 308 CGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQ-PDHITFVGA 366
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACS L+DEG + M +D I P + HY C+VDLLG G LD+AY LI M V P
Sbjct: 367 LAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMP 426
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +W LL +C+ H +V L E +E LIEL+ +SG+YV+L N+Y+ G WE V LR+
Sbjct: 427 DSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQ 486
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KG++ CS I +K V+ F+ DVSHP IY L + ++ AGYV + S
Sbjct: 487 LMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGS 546
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H++ +EK + + HSE+LAIAFG+++T PGT + + KNLRIC DCH K +S +
Sbjct: 547 VFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITE 606
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD R+HHFR G CSC DYW
Sbjct: 607 REITVRDVNRYHHFRHGLCSCGDYW 631
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 2/227 (0%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P+N + + ++ C+ +L G Q+HAR+ + G + L T L++ YS A
Sbjct: 55 PSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD+IP+ + WNVLI Y N A+ L+ + E G KPD+ T VL+AC+ L
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM--LEYGLKPDNFTLPFVLKACSAL 172
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G IH + G+ + + +L+ MY+KCG + A VF + ++D V W++M+
Sbjct: 173 STIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSML 232
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ A NGH +++ M GV P + T V+S+ + + G
Sbjct: 233 AAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHG 279
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L++C ALE G+++H + + G ++L L+ YS C SL A +F +P+ +
Sbjct: 64 LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGN 123
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+ W+ +I A NG AI + M G+ PD+ T VL ACS + EG + +
Sbjct: 124 LFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHE 183
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
R+ + G ++ +VD+ + G + A + + V D+ +W ++L A
Sbjct: 184 RVIRS-GWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAA 234
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/462 (40%), Positives = 288/462 (62%), Gaps = 4/462 (0%)
Query: 47 MGGLQIHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
+G +H V R G+ + D ++D+Y+ K A K+FD +P RD V+WN LI+
Sbjct: 286 LGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITG 345
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y++N +A+ ++++++ E G KP T + VL A ++LG L+ G ++H + G
Sbjct: 346 YMQNGLANEAIRIYNDMHNHE-GLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLN 404
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + LI +Y+KCG L A +F+ MP + W+A+I+GL ++GHG A+ F M
Sbjct: 405 LDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQM 464
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q+ + PD TF +L+ACSH GLVD+G F D M +GI+P HY C+VD+LGRAG
Sbjct: 465 QQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQ 524
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
LD+A++ I SM +KPDS +W LLGACRIH +V +G+ ++L EL + G YVL+ N+
Sbjct: 525 LDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNM 584
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV--VDDVSHPRINEIYQMLD 403
Y+ +G W+ V +R + + LQ TPG S++ +KG V F HP+ EI + L
Sbjct: 585 YAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLH 644
Query: 404 EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLR 463
++ ++K AGYV + + L ++ +EK L+ HSE+LAIAFG++ TPPGT + + KNLR
Sbjct: 645 DLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLR 704
Query: 464 ICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+C DCH+ K +S + RE+I+RD RFHHF++G CSC D+W
Sbjct: 705 VCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 26/331 (7%)
Query: 51 QIHARVLRDGYQLDSQLMT-TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+HA LR G + + +L+ Y F + EA ++FDE+P+RD AWN ++S RN
Sbjct: 87 QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
R DA+ L + E G D VT VL C LG +H Y +HG ++
Sbjct: 147 TRAADAVTLLGRMVGE--GVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELF 204
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+CN+LI +Y K G L A VF GM +D+V+W+++IS G A+E F M +G
Sbjct: 205 VCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESG 264
Query: 230 VFPDDQTFTGVLSACSHCGLVDE-GMM----FLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
V PD T + SA + CG DE G ++ R D G +I +VD+ +
Sbjct: 265 VCPDVLTLVSLASAVAQCG--DELGAKSVHCYVRRRGWDVG---DIIAGNAMVDMYAKMS 319
Query: 285 LLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQE-----SG 337
+D A ++ ++ PD + W TL+ + L I ++ E G
Sbjct: 320 KIDAAQKVFDNL---PDRDVVSWNTLITG---YMQNGLANEAIRIYNDMHNHEGLKPIQG 373
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
+V +L YS +G ++ + + GL
Sbjct: 374 TFVSVLPAYSYLGGLQQGMRMHALSIKTGLN 404
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 45 SLMGGLQ----IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWN 100
S +GGLQ +HA ++ G LD + T L+DLY+ K EA LF+ +P+R T WN
Sbjct: 383 SYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWN 442
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI- 159
+I+ + AL LF + +EE KPD VT + +L AC+H G ++ G +
Sbjct: 443 AIIAGLGVHGHGAKALSLFSQMQQEE--IKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQ 500
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ +G ++ M + G L AFE + MP K D W A++ ++G+
Sbjct: 501 TVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGN 556
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 294/493 (59%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E + +M + + F S + + + G +IH +R G + + ++L+
Sbjct: 283 ETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLI 342
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ + ++ ++F + +RD ++WN +I+ ++N + L F + + KP
Sbjct: 343 DMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK--IKPK 400
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ ++ ACAHL L G+++H YI+ +G+ + + +SL+ MY+KCG++ A ++F
Sbjct: 401 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFD 460
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M +D+VSW+AMI G A++GH DAIE F M+ G+ P+ F VL+ACSH GLVDE
Sbjct: 461 RMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDE 520
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ + M+ DFGI P + HY V DLLGRAG L++AY I M + P ++W TLL AC
Sbjct: 521 AWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSAC 580
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+HK+V + E+V ++E+ + +G Y+LL N+YS+ W++ + R + G++ TP
Sbjct: 581 RVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPA 640
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
CS I ++ V+ F+ D SHP +I + ++ + + ++ GYV + + H++ E+K
Sbjct: 641 CSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKY 700
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
+ HSE+LAI FG++ TP GTTIRV KNLR+C DCH K +S + RE+++RD RFH
Sbjct: 701 LVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFH 760
Query: 493 HFREGRCSCNDYW 505
HF+ G CSC DYW
Sbjct: 761 HFKNGTCSCGDYW 773
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+EG F +M +I ++ S + C +L G Q+H + R+G+ + + ++L
Sbjct: 383 DEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSL 442
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ A ++FD + RD V+W +I + DA+ LF+ + E G +P
Sbjct: 443 VDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTE--GIEP 500
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+ V + VL AC+H G ++ K ++ + G + ++ + + G L A++
Sbjct: 501 NYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 560
Query: 191 FKGMPEKDVVS-WSAMISG 208
GMP S W+ ++S
Sbjct: 561 ICGMPIGPTGSVWATLLSA 579
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 129/320 (40%), Gaps = 30/320 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ P + F M + + +K C L G +H ++R G
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D LM++YS + + ++ A VL R + R A L
Sbjct: 139 LDFDLYTGNALMNMYSKL-------RFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVG 191
Query: 121 NLNREESGCKP--DDVTCLLVLQACAHLGALEFGEKI----HRYISEHGYGSKMNLCN-- 172
N R+ S + DV+C + EF ++ ++ SE+ +M CN
Sbjct: 192 NQGRKVSDIEAFNYDVSCR----------SREFEAQVLEIDYKPRSEY---REMEACNLG 238
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
I S S+ ++F+ MPEKD+VSW+ +I+G A NG + + M A + P
Sbjct: 239 QQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKP 298
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D T + VL + + +G + S G+ ++ ++D+ + + +Y++
Sbjct: 299 DSFTLSSVLPLIAENVDISKGKE-IHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRV 357
Query: 293 ITSMGVKPDSTIWRTLLGAC 312
T + + D W +++ C
Sbjct: 358 FTLL-TERDGISWNSIIAGC 376
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 51 QIHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+HA+VL+ +Q ++ L+ +YS ++ +LF+ + +AW +I CY +
Sbjct: 29 QLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSH 86
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+L F + SG PD VL+ACA L L GE +H YI G +
Sbjct: 87 GLPHKSLGSF--IGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLY 144
Query: 170 LCNSLIAMYSKCGSLGM-------AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA--IE 220
N+L+ MYSK L A +V M E+ + S + + + GR IE
Sbjct: 145 TGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTER---TRSVRTASVLVGNQGRKVSDIE 201
Query: 221 SF-------GAMQRAGVFPDDQTFTGVLSACSHCGLVDE-----GMMFLDRMSKDFGILP 268
+F A V D C L + M +D + K F ++P
Sbjct: 202 AFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMP 261
Query: 269 --NIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLL 309
++ + ++ R GL + ++ MG +KPDS ++L
Sbjct: 262 EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVL 307
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 302/536 (56%), Gaps = 42/536 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E+ + + +K + + + + + C +L G Q+H+ ++ G
Sbjct: 389 MIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAG 448
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q +S + L+ LY + ++FD + +DTV++N +S ++N +A +F+
Sbjct: 449 CQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508
Query: 121 NLNREESGCKPDDVTCLLVLQACA-----------------------------------H 145
N+ PD V+ ++ ACA +
Sbjct: 509 NMP------SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGN 562
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGA + G++IH + G S + + N+L++MY KC S + +VF M E+D+ +W+ +
Sbjct: 563 LGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTI 621
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+G A +G GR+AI + M AGV P++ TF G+L ACSH GLVDEG F MS D+G
Sbjct: 622 ITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYG 681
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ P + HY C+VDLLGRAG + A I M ++PDS IW LLGAC+IHK+V +G R
Sbjct: 682 LTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAA 741
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L ++ +G+YV+L N+YSS G W++V ++R+ M E+G+ PGCS + +K +H F
Sbjct: 742 EKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSF 801
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
V D H +I IY L E+ LK GYV + LH++ E+K ++L YHSEKLA+A+
Sbjct: 802 VTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAY 861
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
G+L TP G I++ KNLRIC DCH F K +S V RE+ +RD RFHHFR G CSC
Sbjct: 862 GLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 40 CMKFCSLMGGLQIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
M C + G AR L D D T++ Y + EA LF+ +P+R+ V+
Sbjct: 131 AMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVS 190
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
W V+IS Y+ ++ A +F + E G P+ + VL A HLG E IH
Sbjct: 191 WTVMISGYVLIEQHGRAWDMFRTMLCE--GMTPEQPNLVSVLSAVRHLGKPGILESIHVL 248
Query: 159 ISEHGYGSKMNLCNSLIAMYSK-CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+ + G+ + + +++ Y+K L A + F+GM ++ +WS +I+ L+ G D
Sbjct: 249 VHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDD 308
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A F QR + T +L+ + G +D+ + D++ + PN+ + ++
Sbjct: 309 A---FAVYQR-DPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMI 359
Query: 278 DLLGRAGLLDQAYQLITSMGVK 299
+ ++D+A L M +
Sbjct: 360 TGYMQNEMVDEAEDLFNRMPFR 381
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 52/297 (17%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQ 110
IH V + G++ D + T +++ Y+ + A K F+ + R+ W+ +I+ +
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R DA ++ R+ P + +L A G ++ + + I E S
Sbjct: 305 RIDDAFAVY---QRDPLKSVPSRTS---MLTGLARYGRIDDAKILFDQIHEPNVVS---- 354
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N++I Y + + A ++F MP ++ +SW+ MI+G A NG A+ S A+ R G+
Sbjct: 355 WNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGM 414
Query: 231 FPDDQTFTGVLSACS-----------HCGLVDEGMMF----------------------- 256
P + T ACS H V G F
Sbjct: 415 LPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQ 474
Query: 257 -LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
DRM+ + + Y + L + L D+A + +M PD W T++ AC
Sbjct: 475 IFDRMT-----VKDTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSWTTIISAC 525
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 111/294 (37%), Gaps = 74/294 (25%)
Query: 83 EACKLFDEIPQRDTVAWN-------------------------------VLISCYIRNQR 111
EA ++FD +P RD +AWN +L+S Y R R
Sbjct: 51 EAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGR 110
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
RDA +FD + + VTC + G + K+ + S
Sbjct: 111 VRDARRVFDGMGVRNTVAWNAMVTCYV------QNGDITLARKLFDAMPSRDVSS----W 160
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM-NGHGRDAIESFGAMQRAGV 230
N+++ Y + A +F+ MPE++ VSW+ MISG + HGR A + F M G+
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR-AWDMFRTMLCEGM 219
Query: 231 FPDDQTFTGVLSACSHCG----------LVDE---------GMMFLDRMSKDFGILP--- 268
P+ VLSA H G LV + G L+ +KD +L
Sbjct: 220 TPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAV 279
Query: 269 ---------NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
N + + ++ L +AG +D A+ + +K + L G R
Sbjct: 280 KFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLAR 333
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 269/422 (63%), Gaps = 2/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FDE+P RD ++W+ L+ Y++ + AL +F N+ E G +P+ + L A
Sbjct: 232 AREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM--VEQGVRPNQAAVVTALSAA 289
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG LE G+ +H + G MN+ +L+ MY+KCG + +A EVF GM +DV +W+
Sbjct: 290 ARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWN 349
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI GLA +G GRDA+E F G+ P + TF GVL+ CS GLV EG + + +
Sbjct: 350 AMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEK 409
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ I P + HYGC+VDLLGRAGL+ +A +LI M + PD +W T+L +C+ H V LG
Sbjct: 410 YRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVS 469
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
V LIEL SG YVLL +Y+ W++V+E+R+ M+ +G + G S + G VH
Sbjct: 470 VGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVH 529
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
+F+V D H +IY LD INK+L AGYV +++S LH++G EEK +A+ HSE+LAI
Sbjct: 530 KFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSERLAI 589
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+G + G+ IR+ KNLR+C DCH F+K+++ V+ RE+I+RD RFHH +EG+CSC D
Sbjct: 590 AYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDGSRFHHMKEGKCSCLD 649
Query: 504 YW 505
YW
Sbjct: 650 YW 651
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y E +F M ++ + N A A+ + L G +H V R G
Sbjct: 250 LVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSG 309
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D+Y+ A ++FD + +RD AWN +I + RDA+ LF+
Sbjct: 310 MPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFE 369
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
E G P +VT + VL C+ G + G + + I E + +M ++ +
Sbjct: 370 RFISE--GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLG 427
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G + A E+ +GM D V W ++S +G
Sbjct: 428 RAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHG 462
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N ++A Y + G + +A EVF MP +D +SWS ++ G A+ F M GV
Sbjct: 217 NEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVR 276
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P+ LSA + GL++ G F+ + + G+ ++ +VD+ + G + A +
Sbjct: 277 PNQAAVVTALSAAARLGLLEHG-KFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVARE 335
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ M + D W ++ C + H LG +E
Sbjct: 336 VFDGMR-RRDVFAWNAMI--CGLAAH-GLGRDAVE 366
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 305/506 (60%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSS-PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ AY+ S +E LF KM I N F+ S +K C G Q+++ ++
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + +L+ +Y+ + +A K FD + +++ V++N ++ Y +N ++ +A LF
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + ++G T +L A +GA+ GE+IH + + GY S +CN+LI+MYS
Sbjct: 246 NEI--ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG++ AF+VF M +++V+SW++MI+G A +G A+E F M G P++ T+
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH G++ EG + M K+ GI+P + HY C+VDLLGR+GLL +A + I SM +
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D+ +WRTLLGACR+H + LG E ++E + + Y+LL NL++S G W+ V ++R
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E+ L GCS I ++ VH F V + SHP+ +IYQ LD++ ++K GY+ +
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 543
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K L HSEK+A+AFG+++T IR+ KNLR+C DCH K +S
Sbjct: 544 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 603
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHH + G CSCNDYW
Sbjct: 604 GREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 167/355 (47%), Gaps = 9/355 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ + LF M + F S + C + L G Q+H+RV+R G
Sbjct: 22 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 81
Query: 61 YQLDSQLMTTLMDLYSTFEKSF---EACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDAL 116
LD + +L+D+Y+ ++ K+F+++P+ + ++W +I+ Y ++ ++A+
Sbjct: 82 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAI 141
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + +P+ + VL+AC +L GE+++ Y + G S + NSLI+
Sbjct: 142 ELFCKMI--SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 199
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY++ G + A + F + EK++VS++A++ G A N +A F + G+ T
Sbjct: 200 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 259
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F +LS + G + +G R+ K G N ++ + R G ++ A+Q+ M
Sbjct: 260 FASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEM 318
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVG 350
+ + W +++ H T + ++E + + YV +L+ S VG
Sbjct: 319 EDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 372
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 98/165 (59%), Gaps = 6/165 (3%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FD++P+R+ V W ++I+ + + RDA+ LF L+ E SG PD T VL AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLF--LDMELSGYVPDRFTYSSVLSAC 61
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC---GSLGMAFEVFKGMPEKDVV 200
LG L G+++H + G + + SL+ MY+KC GS+ + +VF+ MPE +V+
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121
Query: 201 SWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
SW+A+I+ A +G ++AIE F M + P+ +F+ VL AC
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 166
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A++VF MPE+++V+W+ MI+ A G RDAI+ F M+ +G PD T++ VLSAC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 247 CGLVDEGMMF-------------------------------LDRMSKDFGILP--NIHHY 273
GL+ G +D K F +P N+ +
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 274 GCVVDLLGRAGLLD-QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
++ ++G D +A +L M ++P+ + ++L AC GE+V + +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 330 ELK-AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+L A + L+++Y+ G E ++ + + EK L
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 222
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/492 (39%), Positives = 293/492 (59%), Gaps = 6/492 (1%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
G LF++ Q+ + + I C K +G L A + + ++ +L++
Sbjct: 192 GLQLFDESPQRNKAESILLWNVLINGCCK----VGDLSKAASLFEAMPERNAGSWNSLIN 247
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+ A +LF ++P+++ V+W +I+ + +N AL +F + E G +P+D
Sbjct: 248 GFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRM--LEEGVRPND 305
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
+T + L AC +GAL+ GE+IH Y+S +G+ + +L+ MY+KCG++ A VF
Sbjct: 306 LTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVE 365
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
KD+++WS MI G A++G A++ F M+ AG+ PD+ F +L+ACSH G VD+G
Sbjct: 366 TKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQG 425
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
+ F + M D+ I P + HY +VDLLGRAG LD+A I SM + PD IW L ACR
Sbjct: 426 LNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACR 485
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
HK++ + E E L++L+ + G YV L N+Y++VG WE V+ +R M +G++ PG
Sbjct: 486 AHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGW 545
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S I ++G VH FV D +H R EI L+EI K GY+ E LHN+ EEK +A
Sbjct: 546 SYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDA 605
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L HSEKLA+AFG+++T PG+TIR+ KNLR+C DCH+ K S + RE+I+RD RFHH
Sbjct: 606 LGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHH 665
Query: 494 FREGRCSCNDYW 505
F++G CSC DYW
Sbjct: 666 FKDGTCSCGDYW 677
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +S + E+ +F +M ++ + N A+ C K +L G +IH + +G
Sbjct: 276 MINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNG 335
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QL+ + T L+D+Y+ A ++F E +D + W+V+I + + AL F
Sbjct: 336 FQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF- 394
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ + +G PD+V L +L AC+H G ++ G + ++ M ++ +
Sbjct: 395 -VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLG 453
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAM 205
+ G L A + MP D V W A+
Sbjct: 454 RAGRLDEALSFIQSMPINPDFVIWGAL 480
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 33/230 (14%)
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+IH I H S + LI+ SL A +F+ ++ ++A+I GLA N
Sbjct: 58 QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSA-----------CSHCGLVDEGMMF--LDRM 260
++ F M R + PD T VL + C H G++ G+ F R+
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI--TSMGVKPDSTI-WRTLLGACRIHKH 317
S +VD+ + G L QL + K +S + W L+ C
Sbjct: 178 S--------------LVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGD 223
Query: 318 VTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
++ + E + E + +G + L+N + GD ++ +EL M EK +
Sbjct: 224 LSKAASLFEAMPE---RNAGSWNSLINGFVRNGDLDRARELFVQMPEKNV 270
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 291/520 (55%), Gaps = 29/520 (5%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
+ ++M QK + I C + L G HA VLR+G + + ++D+
Sbjct: 317 LVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDM 376
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL------------ 122
Y K ACK+F+ +P + V WN LI+ +R+ A +FD +
Sbjct: 377 YMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMI 436
Query: 123 -----------------NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ G D VT + + AC +LGAL+ + + YI ++
Sbjct: 437 GALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIH 496
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ L +L+ M+S+CG A VFK M ++DV +W+A I +AM G+ AIE F M
Sbjct: 497 VDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEM 556
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
V PDD F +L+ACSH G VD+G M K GI P+I HYGC+VDLLGRAGL
Sbjct: 557 LEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGL 616
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
L++A LI SM ++P+ +W +LL ACR HK+V L E L +L + G +VLL N+
Sbjct: 617 LEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNI 676
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
Y+S G W V +R M EKG+Q PG S+I ++G++HEF D SH I ML+EI
Sbjct: 677 YASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEI 736
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
N +L AGYV + T+ L ++ +EK + LS HSEKLA+A+G++ T G IRV KNLR+C
Sbjct: 737 NCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMC 796
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH+FAK++S +YNRE+ +RD R+H F+EG CSC DYW
Sbjct: 797 SDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 186/425 (43%), Gaps = 44/425 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS +E LF +M + + NP I C K L G ++ + + G
Sbjct: 202 LINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELG 261
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L + ++ L+D+Y A ++FDE ++ V +N ++S Y+ ++ D L + D
Sbjct: 262 MELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILD 321
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G +PD VT L + ACA LG L G+ H Y+ +G N+ N++I MY K
Sbjct: 322 EM--LQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMK 379
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH------------GRD----------- 217
CG A +VF+ MP K VV+W+++I+GL +G RD
Sbjct: 380 CGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGAL 439
Query: 218 --------AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AIE F MQ G+ D T G+ SAC + G +D + K+ I +
Sbjct: 440 VQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKN-DIHVD 498
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ +VD+ R G A + M K D + W +G + + + ++
Sbjct: 499 LQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGAIELFNEML 557
Query: 330 ELKAQ-ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP-----GC--STIGLKGV 381
E K + + +V LL S G ++ ++L M EK P GC +G G+
Sbjct: 558 EQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSM-EKAHGIRPHIVHYGCMVDLLGRAGL 616
Query: 382 VHEFV 386
+ E V
Sbjct: 617 LEEAV 621
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 181/381 (47%), Gaps = 37/381 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + ++ L+ +M I + + F + C K +L G+Q+H VL+ G
Sbjct: 101 LIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMG 160
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+ Y+ K KLFD + +R+ V+W LI+ Y +++A+ LF
Sbjct: 161 LEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFF 220
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E+G +P+ VT + V+ ACA L LE G+K+ YISE G + N+L+ MY K
Sbjct: 221 QMG--EAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMK 278
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A ++F K++V ++ ++S + D + M + G PD T
Sbjct: 279 CGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLST 338
Query: 241 LSAC-----------SHCGLVDEGMMFLDRMS-----------------KDFGILPN--I 270
++AC SH ++ G+ D +S K F +PN +
Sbjct: 339 IAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTV 398
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
+ ++ L R G ++ A+++ M ++ D W T++GA V++ E IE E
Sbjct: 399 VTWNSLIAGLVRDGDMELAWRIFDEM-LERDLVSWNTMIGAL---VQVSMFEEAIELFRE 454
Query: 331 LKAQE-SGDYVLLLNLYSSVG 350
++ Q GD V ++ + S+ G
Sbjct: 455 MQNQGIPGDRVTMVGIASACG 475
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
D G + ++ Y C++ AGL DQA Y + MG+ PD + LL AC K +
Sbjct: 88 DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACS--KILA 145
Query: 320 LGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
L E V H LK GD + L++ Y+ G + ++L + M E+ + +
Sbjct: 146 LSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLER--------NVV 197
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQM 401
+++ + D+S ++ +QM
Sbjct: 198 SWTSLINGYSGRDLSKEAVSLFFQM 222
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/502 (39%), Positives = 305/502 (60%), Gaps = 12/502 (2%)
Query: 14 GFYLFEK-MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD-GYQLDSQLMTTL 71
F L+ + + + N F K C L G +H VL+ D + L
Sbjct: 91 AFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAAL 150
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ--------RTRDALCLFDNLN 123
++ Y+ K LF++I + D +WN ++S Y+ N + + L LF +
Sbjct: 151 LNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLF--IE 208
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
++S K ++VT + ++ ACA LGAL G H Y+ +H + +LI MYSKCG
Sbjct: 209 MQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGC 268
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L +A ++F +P +D + ++AMI G A++G+G A++ F M G+ PDD T + +
Sbjct: 269 LDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCS 328
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GLV+EG + M + +G+ P + HYGC+VDLLGRAG L +A + + +M +KP++
Sbjct: 329 CSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAV 388
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IWR+LLGA R+H ++ +GE V++HLI+L+ + SG+YVLL N+Y+S+ W+ VK +R+ M
Sbjct: 389 IWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMK 448
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ G+ PG S + + G +HEF++ D +HPR EIY L+E++++L G+ L
Sbjct: 449 DHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLF 508
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ EEK +ALSYHSE+LAIAF ++A+ IR+ KNLR+C DCH +K++S +Y RE+
Sbjct: 509 DIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREI 568
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
I+RDR RFHHF+EG CSC+DYW
Sbjct: 569 IVRDRNRFHHFKEGACSCSDYW 590
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/422 (44%), Positives = 268/422 (63%), Gaps = 3/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD +PQRD VAW+ +I+ Y+ R+R+AL LFD + +G + T + VL AC
Sbjct: 1404 ARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEM--LSAGTTVGEATLVSVLTAC 1461
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A +G L+ G+ +H Y+ G + L +L+ MYSKCG++ A EVF+ M E++V +W+
Sbjct: 1462 AQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWT 1521
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+ +SGLAMNG G + ++ F M+ AG+ P+ +F VL CS GLVDEG D M K
Sbjct: 1522 SAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDK- 1580
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+G+ P HYGC+VDL GRAG LD A I M ++P +W LL A RIH V LG+
Sbjct: 1581 YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKY 1640
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
++ L+ ++++ +V L N+Y+ +W+ V +R M KG++ PG STI + G VH
Sbjct: 1641 ALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVH 1700
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
EF V HPR NEI ML E++++L++ GY A L ++ EEK A+S HSEKLA+
Sbjct: 1701 EFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLAL 1760
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ P IR+ KNLR+C+DCH + K++S V+NRE+++RDR RFHHF+ G CSC D
Sbjct: 1761 AFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRD 1820
Query: 504 YW 505
YW
Sbjct: 1821 YW 1822
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E LF++M + C + +L G +H V G
Sbjct: 1422 MIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRG 1481
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q+ +L T L+D+YS A ++F+ + +R+ W +S N + L LF
Sbjct: 1482 MQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFK 1541
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E +G +P+ V+ + VL+ C+ G ++ G + ++G ++ +Y +
Sbjct: 1542 RM--EGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGR 1599
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAM---------QR 227
G L A MP E W A+++ ++ G+ A++ A+ Q
Sbjct: 1600 AGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQL 1659
Query: 228 AGVFPDDQTFTGV 240
+ ++ + Q + GV
Sbjct: 1660 SNIYAESQNWKGV 1672
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+++A + G + A ++F GMP++D V+WSAMI+G G R+A+ F M AG
Sbjct: 1389 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 1448
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
+ T VL+AC+ G +D G ++ + G+ +I +VD+ + G + A +
Sbjct: 1449 VGEATLVSVLTACAQIGTLDRG-KWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAME 1507
Query: 292 LITSMGVK 299
+ SM +
Sbjct: 1508 VFESMAER 1515
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 302/505 (59%), Gaps = 7/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS + + L M + + N F S ++ C + L Q+H+ +++ G
Sbjct: 357 MISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVG 413
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+YS + EA K+F E+ D+V WN +I+ + ++ +AL L+
Sbjct: 414 LESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYK 473
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ R G D T VL+AC L LE G + H ++ + + + L N+L+ MY K
Sbjct: 474 SMRR--VGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCK 529
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F M +KDV+SWS MI+GLA NG +A+ F +M+ G P+ T GV
Sbjct: 530 CGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGV 589
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV+EG + M+ +GI P HYGC++DLLGRA LD +LI M +P
Sbjct: 590 LFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEP 649
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D WRTLL ACR ++V L + +++L Q++G YVLL N+Y+ W V E+R
Sbjct: 650 DVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRR 709
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PGCS I + +H F++ D SHP+I+EI + L++ +L AGYV +
Sbjct: 710 TMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNF 769
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L E++ ++L YHSEKLAI FG+++ P TIR+ KNL+IC DCH FAK+++ +
Sbjct: 770 VLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQ 829
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++IRD +R+HHF++G CSC DYW
Sbjct: 830 RHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 15/301 (4%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
++ + M ++ + + S IKCC+ ++ G ++H + +GY + L L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+Y F EA LFD++P+R+ V+W +IS Y Q A+ L + R+ G P+
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRD--GVMPNM 386
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
T VL+AC L L +++H +I + G S + + ++LI +YSK G L A +VF+
Sbjct: 387 FTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFRE 443
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
M D V W+++I+ A + G +A+ + +M+R G D T T VL AC+ L++ G
Sbjct: 444 MMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG 503
Query: 254 M---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ + + +D IL N ++D+ + G L+ A + M K D W T++
Sbjct: 504 RQAHVHVLKFDQDL-ILNN-----ALLDMYCKCGSLEDAKFIFNRMA-KKDVISWSTMIA 556
Query: 311 A 311
Sbjct: 557 G 557
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 9/216 (4%)
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
++L CY R+ + A+ + D++ R G D +T +++ C GA+ G+++HR+I
Sbjct: 256 SLLNHCYRRDLPS--AMHVLDSMERR--GVWADSITYSELIKCCLAHGAVREGKRVHRHI 311
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+GY K L N LI MY K L A +F MPE++VVSW+ MIS + A+
Sbjct: 312 FSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAM 371
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
M R GV P+ TF+ VL AC + + ++ ++ G+ ++ ++D+
Sbjct: 372 RLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKV----GLESDVFVRSALIDV 427
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ G L +A ++ M + DS +W +++ A H
Sbjct: 428 YSKMGELLEALKVFREM-MTGDSVVWNSIIAAFAQH 462
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/507 (40%), Positives = 304/507 (59%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS E LF +M + N F + + C G QIH+ ++
Sbjct: 162 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 221
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + ++L+D+Y+ + +A +F +P+RD VA +IS Y + +AL LF
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G + VT VL A + L AL G+++H ++ G S + L NSLI MYSK
Sbjct: 282 QLQIE--GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSK 339
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTG 239
CG++ A +F MPE+ +SW+AM+ G + +G R+ +E F M+ V PD T+
Sbjct: 340 CGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLA 399
Query: 240 VLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH L D G+ +F + ++ GI P+I HYGCVVDLLGRAG +++A+ I M
Sbjct: 400 VLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPF 459
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P + IW +LLG+CR+H V +G V + L+EL+ + +G+YV+L NLY+S G WE ++ +
Sbjct: 460 VPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNI 519
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M EK + PG S + L +VH F D +HPR E+ + + E++ + K GYV ++
Sbjct: 520 RDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDL 579
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+AFG++ATP GTTIRV KNLRICVDCH+FAK +S +
Sbjct: 580 SCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRL 639
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y R VI+RD+ RFH+ G CSC DYW
Sbjct: 640 YARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 138/272 (50%), Gaps = 8/272 (2%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C+ ++ G ++H +++ Y L T L+ LY+ + +A ++FDE+PQ++ V+W
Sbjct: 100 CVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSW 159
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+IS Y + +AL LF + R ++ +P+ T +L +C E G +IH
Sbjct: 160 TAMISAYSQRGFAFEALNLFVEMLRSDT--EPNHFTFATILTSCYGSLGFETGRQIHSIA 217
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ Y S M + +SL+ MY+K G + A VF +PE+DVV+ +A+ISG A G +A+
Sbjct: 218 IKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEAL 277
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
+ F +Q G+ + T+ VL+A S ++ G + + G + ++D+
Sbjct: 278 KLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS-GQYSYVVLLNSLIDM 336
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTI--WRTLL 309
+ G + A ++ SM P+ T W +L
Sbjct: 337 YSKCGNVCYARRIFDSM---PERTCISWNAML 365
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L C A+ G+++H ++ + Y + L LI +Y+KC LG A E+F MP+K+
Sbjct: 96 ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKN 155
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HC 247
VVSW+AMIS + G +A+ F M R+ P+ TF +L++C H
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 215
Query: 248 GLVD---EGMMF-----LDRMSKD---------FGILPNIHHYGCVVDLLGRA--GLLDQ 288
+ E MF LD +K F LP C + G A GL ++
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275
Query: 289 AYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN- 344
A +L + G+ +S + ++L A + G++V H++ Q S YV+LLN
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLR-SGQYS--YVVLLNS 332
Query: 345 ---LYSSVGDWEKVKELREFMNEK 365
+YS G+ + + + M E+
Sbjct: 333 LIDMYSKCGNVCYARRIFDSMPER 356
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/460 (40%), Positives = 275/460 (59%), Gaps = 2/460 (0%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
LM IH L+ + + + T L +YS + A KLFDE P++ +WN +IS
Sbjct: 335 LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y +N T DA+ LF + E P +TC +L ACA LGAL G+ +H + +
Sbjct: 395 YTQNGLTEDAISLFREMQNSEFSPNPVTITC--ILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + + +LI MY+KCGS+ A +F MP+K+ V+W+ MISG ++GHG++A+ F M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEM 512
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+G+ P TF VL ACSH GLV EG + M +G P++ HY CVVD+LGRAG
Sbjct: 513 LNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGH 572
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
L +A Q I +M ++P ++W TLLGACRIHK L V E L EL G +VLL N+
Sbjct: 573 LQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 632
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
+S+ ++ + +R+ ++ L PG + I + H F D SHP++ I++ L+++
Sbjct: 633 HSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKL 692
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
+++ AGY E LH++ EE+ + HSE+LAIAFG++AT PGT IR+ KNLR+C
Sbjct: 693 EGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVC 752
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+DCH K++S + R +++RD RFHHF++G CSC DYW
Sbjct: 753 LDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 175/399 (43%), Gaps = 35/399 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S++ SP +F +R+ + N +FAI F G IH + + D
Sbjct: 89 LMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVD 148
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + L + ++ +Y F + +A K+FD +P++DT+ WN +IS Y +N+ +++ +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+L ES + D T L +L A A L L G +IH ++ G S + I++YS
Sbjct: 209 RDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + MA +F+ D+V+++AMI G NG ++ F + +G T
Sbjct: 268 KCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVS 327
Query: 240 VLSACSHCGLV------DEGMMFLDRMS-------------------KDFGILP--NIHH 272
++ H L+ FL S K F P ++
Sbjct: 328 LVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ ++ + GL + A L M P+ +L AC ++LG + + L+
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG-KWVHDLV 446
Query: 330 ELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKG 366
ES YV L+ +Y+ G + + L +FM +K
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E+ LF +M+ NP + + C + +L G +H V
Sbjct: 391 MISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + T L+ +Y+ EA +LFD +P+++ V WN +IS Y + ++AL +F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFS 510
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYS 179
+ SG P VT L VL AC+H G ++ G++I + I +G+ + ++ +
Sbjct: 511 EM--LNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILG 568
Query: 180 KCGSLGMAFEVFKGMP 195
+ G L A + + MP
Sbjct: 569 RAGHLQRALQFIEAMP 584
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 139/358 (38%), Gaps = 47/358 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q HA+++ G++ D L+T L S + A +F + + D +NVL+ + N+
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+L +F +L R+ + KP+ T + A + G IH G S++ L
Sbjct: 98 SPHSSLAVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLL 156
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG------- 223
++++ MY K + A +VF MPEKD + W+ MISG N ++I+ F
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 224 -----------------------AMQ------RAGVFPDDQTFTGVLSACSHCGLVDEGM 254
MQ + G + D TG +S S CG +
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAS 276
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+ P+I Y ++ G + + L + + TL+ +
Sbjct: 277 TLFREFRR-----PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV 331
Query: 315 HKHVTLGERVIEHLIELKAQ---ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
H+ L + H LK+ + L +YS + + E ++L + EK L +
Sbjct: 332 SGHLMLIYAI--HGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 294/491 (59%), Gaps = 5/491 (1%)
Query: 17 LFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY 75
++ +M + P N F +FA+K C +L G Q+H++ R G + + T L++LY
Sbjct: 117 VYRRMLRAGSPLPNSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLY 176
Query: 76 STFEKSFEACKLFD-EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
+ E+ A +FD + ++ AW+ +I Y R +AL LF + + + PD+V
Sbjct: 177 AKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREM--QAADVNPDEV 234
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T + V+ ACA GAL+ G +H +I G + L +LI MY+KCG + A VF M
Sbjct: 235 TMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAM 294
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
E+D +WSAMI GLA++G A++ F M V P++ TF GVLSAC+H GLV+EG
Sbjct: 295 AERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGR 354
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+ M ++ GI P++ +YGC+VDL R+ LLD+AY +T M + P+S IWRTLL A +
Sbjct: 355 RYWSTM-QELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKN 413
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
+ + + L+EL+ +YVLL NLY+S W++V +R+ M E + GCS
Sbjct: 414 SNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCS 473
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
+I + G +H+FVV D SHP I EI +L EI ++ AG+ + LH++G EEK AL
Sbjct: 474 SIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVLHDVGEEEKEVAL 533
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
HSE+LAIA+G+L T IRV KNLR C DCH AK++S Y+RE+I+RDR+RFH F
Sbjct: 534 CEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVSKSYDREIIVRDRVRFHRF 593
Query: 495 REGRCSCNDYW 505
EG CSC D+W
Sbjct: 594 VEGSCSCKDFW 604
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 18/297 (6%)
Query: 84 ACKLFDEIPQRDTVAWNVLI---SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
A LFD+IP+ +N LI S D + ++ + R S P+ T L
Sbjct: 80 ARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPL-PNSFTLAFAL 138
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDV 199
+AC+ + AL G ++H G + L+ +Y+KC + +A VF GM +K++
Sbjct: 139 KACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNL 198
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MF 256
+WSAMI G + G +A+ F MQ A V PD+ T V+SAC+ G +D G F
Sbjct: 199 AAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAF 258
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+DR GI ++ ++D+ + GL+++A + +M + D+ W ++ IH
Sbjct: 259 IDRK----GITVDLELSTALIDMYAKCGLIERAKGVFDAMAER-DTKAWSAMIVGLAIHG 313
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF---MNEKGLQTT 370
V + ++ ++ELK + + V + + S+ V E R + M E G++ +
Sbjct: 314 LVEVALKLFSRMLELKVRPNN--VTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPS 368
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS E LF +M+ + + I C K +L G +HA + R G
Sbjct: 204 MIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKG 263
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+D +L T L+D+Y+ A +FD + +RDT AW+ +I + AL LF
Sbjct: 264 ITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFS 323
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E +P++VT + VL ACAH G + G + + E G M ++ ++ +
Sbjct: 324 RM--LELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYGCMVDLFCR 381
Query: 181 CGSLGMAFEVFKGM--PEKDVVSWSAMISGLAMNGHGRDAIES 221
L A+ GM P V+ W ++ + N + D ++S
Sbjct: 382 SSLLDEAYSFVTGMAIPPNSVI-WRTLLVA-SKNSNRFDIVQS 422
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + E ++ + + F + C + L G + ++G
Sbjct: 143 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEG 202
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T +DLY + +A ++FD++ +D VAW ++ Y N R+AL LF
Sbjct: 203 VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF- 261
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + G KPD L AC LGAL+ G + R + + L +LI MY+K
Sbjct: 262 -LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 320
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A+ VF+ M +KD++ W+AMI GL M GH + A G M+++GV +D TF G+
Sbjct: 321 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 380
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +C+H GL+ +G + M+K + I P I HYGC+VDLL RAGLL +A+QL+ M +
Sbjct: 381 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 440
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ I LLG C+IH++ L E V++ LI L+ SG+YV+L N+YS+ G WE +LR
Sbjct: 441 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 500
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG++ P CS + +G VHEF V D SHP ++IY+ LDE+ ++K GY
Sbjct: 501 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 560
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ EEK + L +HSEKLAIAF +L T PG TIRV KNLR+C DCH K++S + +
Sbjct: 561 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 620
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G CSCNDYW
Sbjct: 621 REIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 9/285 (3%)
Query: 30 PFACSFAIKCCMKFCS-----LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
P I +K S L G Q+HAR L+ + ++T+L+ LY+ A
Sbjct: 66 PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 125
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
++FDE+P TV W LI+ Y+ R+A+ + N +G +PD T + VL ACA
Sbjct: 126 QRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF--ANGMRPDSFTAVRVLTACA 183
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
+ L GE + R + G + + + + +Y KCG + A EVF M KD V+W A
Sbjct: 184 RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 243
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
M+ G A NGH R+A++ F AMQ G+ PD G LSAC+ G +D G + RM
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAI-RMVDWD 302
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
L N ++D+ + G +A+ + M K D +W ++
Sbjct: 303 EFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMI 346
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/509 (38%), Positives = 294/509 (57%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R S EE L+ +M ++ I + F F +K C +L G+QIHA V G
Sbjct: 102 MIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAG 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D + L+ +Y A +F+++ ++ +W+ +I + + + L L
Sbjct: 162 LEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLG 221
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLCNSLIA 176
+++RE + ++ + L AC HLG+ G IH R ISE K SLI
Sbjct: 222 DMSREGRH-RAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVK----TSLID 276
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGSL VF+ M K+ S++ MI+GLA++G GR+A+ F M G+ PDD
Sbjct: 277 MYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVV 336
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ GVLSACSH GLV EG +RM + I P I HYGC+VDL+GRAG+L +AY LI SM
Sbjct: 337 YVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSM 396
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+KP+ +WR+LL AC++H ++ +GE +++ +L GDY++L N+Y+ W V
Sbjct: 397 PIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVA 456
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R M EK L TPG S + V++FV D S P+ IY M+ ++ QLK GY
Sbjct: 457 RIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTP 516
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+++ L ++ +EK L +HS+KLAIAF ++ T G+ +R+++NLR+C DCH + K +S
Sbjct: 517 DMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFIS 576
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE+ +RD RFHHF++G CSC DYW
Sbjct: 577 VIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA--MYS 179
L E K ++ L +L+ C ++E +K+H +I + G ++L+A S
Sbjct: 20 LQSSELNAKFNEQGWLSLLKRCK---SMEEFKKVHAHILKLGLFYDSFCGSNLVASCALS 76
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+ GS+ A +F+ + E ++ MI G + +A+ + M G+ PD+ T+
Sbjct: 77 RWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPF 136
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL ACS + EG+ + + G+ ++ ++ + G+ G ++ A + M K
Sbjct: 137 VLKACSLLVALKEGVQIHAHVF-NAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEK 195
Query: 300 PDSTIWRTLLGA 311
++ W +++GA
Sbjct: 196 SVAS-WSSIIGA 206
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 261/420 (62%), Gaps = 2/420 (0%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F ++ + V+WNV+I+ Y+ N +A+ +F L E+ PD ++ VL AC
Sbjct: 1250 EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF--LQMEDHAVDPDAISIASVLPACGD 1307
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L AL G +IH Y+ + L N+LI MY+KCG L A EVF M +DVVSW++M
Sbjct: 1308 LSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSM 1367
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS MNG GRDA+ F MQ G+ PD F VLSACSH GL+DEG + M+++
Sbjct: 1368 ISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECK 1427
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P I H+ C+VDLLGRAG +D+AY I M ++P+ +W LL ACR++ ++ +G
Sbjct: 1428 IVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAA 1487
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L +L ++SG YVLL N+Y+ G WE V +R M KG++ PG S L VH F
Sbjct: 1488 DQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTF 1547
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+ D SHP+ +IY+ LD + ++K AGYV E S LH++ E+K L+ HSEKLAIAF
Sbjct: 1548 LAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAF 1607
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L T PG+ IR+ KNLR+C DCH AK++S + RE+ IRD RFHHF G CSC DYW
Sbjct: 1608 AILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 166/340 (48%), Gaps = 19/340 (5%)
Query: 51 QIHARVLRD-GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
++H+++ D + L LM Y+ + + +FDEIP+++ V +NV+I Y+ N
Sbjct: 1045 KLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNN 1104
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
DAL +F N+ G PD T VL+A + L G +IH + G +
Sbjct: 1105 HLYSDALLVFKNMAGH--GIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVF 1162
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N LI+MY KCG L A V MP +DVVSW+++++G A NG DA+E M+ G
Sbjct: 1163 VGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG 1222
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN--IHHYGCVVDLLGRAGLLD 287
+ PD T +L A ++ L + + F+ M F L N + + ++ + +
Sbjct: 1223 LKPDAGTMASLLPAVTNTCL--DNVSFVKEM---FMKLANKSLVSWNVMIAVYMNNSMPA 1277
Query: 288 QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--- 341
+A + M V PD+ ++L AC + LG R+ E+++ + Q + +L
Sbjct: 1278 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQP--NLLLENA 1335
Query: 342 LLNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
L+++Y+ G E +E+ + M + + + T S G+ G
Sbjct: 1336 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 1375
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 131/315 (41%), Gaps = 45/315 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + + +F+ M I + + +K L G+QIHA V+R G
Sbjct: 1097 MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVG 1156
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + L+ +Y EAC++ DZ+P RD V+WN L++ RN + DAL +
Sbjct: 1157 LDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCK 1216
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G KPD T +L A N C
Sbjct: 1217 EM--ELLGLKPDAGTMASLLPAVT------------------------NTC--------- 1241
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
++ E+F + K +VSW+ MI+ N +A++ F M+ V PD + V
Sbjct: 1242 LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASV 1301
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGI----LPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L AC D + L R ++ + PN+ ++D+ + G L+ A ++ M
Sbjct: 1302 LPACG-----DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 1356
Query: 297 GVKPDSTIWRTLLGA 311
+ D W +++ A
Sbjct: 1357 KFR-DVVSWTSMISA 1370
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +S P E +F +M + + + + + C +L+ G +IH V+R
Sbjct: 1266 MIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR 1325
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + L L+D+Y+ A ++FD++ RD V+W +IS Y N + RDA+ LF
Sbjct: 1326 LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFS 1385
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ ++ G PD + + VL AC+H G L+ G + ++E ++ ++ +
Sbjct: 1386 RM--QDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLG 1443
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + A+ K MP E + W A++S
Sbjct: 1444 RAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 292/506 (57%), Gaps = 24/506 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + L ++M ++ + + A + + C + SL G +H + +
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + LMD+Y+ A +F + +D ++WN +I
Sbjct: 383 MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG---------------- 426
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
KPD T +L ACA L ALE G++IH YI +GY S ++ N+L+ +Y K
Sbjct: 427 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG LG+A +F +P KD+VSW+ MISG M+G+G +AI +F M+ AG+ PD+ +F +
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G F M DF I P + HY C+VDLL R G L +AY+ I ++ + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRI+ + L E+V E + EL+ + +G YVLL N+Y+ WE+VK +RE
Sbjct: 600 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMRE 659
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVV-DDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ +KGL+ PGCS I +KG V+ FV ++ SHP +I +L ++ +++K GY +
Sbjct: 660 KIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 719
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N +K AL HSEKLA+AFG+LA PP T+RV KNLR+C DCH AK +S
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKET 779
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC +W
Sbjct: 780 RREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 120/227 (52%), Gaps = 4/227 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD++ RD ++WN +IS Y+ N T L ++ + G D T + VL C
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMY--LGIDVDLATIISVLVGC 261
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A+ G L G+ +H + + ++N N+L+ MYSKCG L A VF+ M E++VVSW+
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MI+G +G AI M++ GV D T +L AC+ G +D G D + +
Sbjct: 322 SMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN 381
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ N+ ++D+ + G +D A + ++M VK D W T++G
Sbjct: 382 -NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK-DIISWNTMIG 426
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 18/230 (7%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VLQ CA +L G+K+H I + L L+++Y+ CG L VF M +K+
Sbjct: 105 VLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKN 164
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+ M+S A G +++I F M G+ + D
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRP---------------ESASELFD 209
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ I N G V + L GL + Y+ + +G+ D ++L C +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGL--EIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 319 TLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDWEKVKELREFMNEKGL 367
+LG+ V I+ + ++ LL++YS GD + + E M E+ +
Sbjct: 268 SLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/496 (39%), Positives = 291/496 (58%), Gaps = 3/496 (0%)
Query: 11 PEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
PEE L+ M++ +N S A+ SL G +IH ++R G D +
Sbjct: 231 PEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWC 290
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
+L+D+Y EA +FD++ +RD V+W +I Y++N R + LF +L S
Sbjct: 291 SLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHL--MNSNI 348
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P+D T VL ACA L A + G++IH Y+ G+ S + ++L+ MYSKCG + A
Sbjct: 349 MPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKS 408
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF+ +P+ D+ SW++++ G A +G A+ F + ++G PD F GVLSAC+H GL
Sbjct: 409 VFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGL 468
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
VD+G+ + + + G+ I HY C++DLL RAG +A +I M +KPD IW LL
Sbjct: 469 VDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALL 528
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
G CRIH ++ L +R + L E++ + YV L N+Y+S G + +RE M+ +G+
Sbjct: 529 GGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVK 588
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PG S I ++ VH F V D SHP+ EI + L E++K++K GYV + LH++ E+
Sbjct: 589 KPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQ 648
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K LSYHSEKLA+AFG+++TP GT I+V KNLR CVDCHN K +S + R++I+RD
Sbjct: 649 KEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSN 708
Query: 490 RFHHFREGRCSCNDYW 505
RFH F G CSC DYW
Sbjct: 709 RFHCFEGGSCSCKDYW 724
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 173/399 (43%), Gaps = 74/399 (18%)
Query: 30 PFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
P+A + +K C+K +L G Q+HA + G + + L+D+Y+ +A K+
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKV 175
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL-NREE-------SGC---------- 129
FDE+ RD +WN++IS Y++ A LFD + NR+ SGC
Sbjct: 176 FDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEAL 235
Query: 130 ------------KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
K + T L A A + +L G+KIH +I G S + SL+ M
Sbjct: 236 ELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDM 295
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y KCGS+ A +F M E+DVVSW+ MI NG + F + + + P+D TF
Sbjct: 296 YGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTF 355
Query: 238 TGVLSACSHCGLVDEGMM---FLDRMSKD-------------------------FGILPN 269
GVL+AC+ D G ++ R+ D F ILP
Sbjct: 356 AGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQ 415
Query: 270 IHHYGCVVDLLGRA--GLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
+ L+G A G D+A ++L+ G KPD + +L AC H L ++
Sbjct: 416 PDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSAC---AHAGLVDKG 472
Query: 325 IEHLIELKAQES-----GDYVLLLNLYSSVGDWEKVKEL 358
+E+ +K + Y +++L + G + + + +
Sbjct: 473 LEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESI 511
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + EEGF LF + I N F + + C + G QIHA ++R G
Sbjct: 323 MIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ S + L+ +YS A +F+ +PQ D +W L+ Y ++ + AL F+
Sbjct: 383 FDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFE 442
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
L + SG KPD + + VL ACAH G ++ G E H +HG ++ +I + +
Sbjct: 443 LLLK--SGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLA 500
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+ G A + MP K D W+A++ G ++G+
Sbjct: 501 RAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGN 536
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 8/183 (4%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
KP L +L+ C AL+ G+++H +I G + + N L+ MY+KCGSL A +
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEK 174
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF M +D+ SW+ MISG G+ A F M D+ ++T ++S C
Sbjct: 175 VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNR 230
Query: 250 VDEGMMFLDRMSKDFGILPN---IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
+E + M K N I + + + + I MG+ D +W
Sbjct: 231 PEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWC 290
Query: 307 TLL 309
+LL
Sbjct: 291 SLL 293
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/526 (37%), Positives = 296/526 (56%), Gaps = 33/526 (6%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E F KM N S + C L G ++H V+R+G + + + L+
Sbjct: 162 EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALV 221
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE------- 125
++Y++ +A +FD + +RDTV+WNVLI+ Y N+ L +F + E
Sbjct: 222 NMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYA 281
Query: 126 --------------------------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
SG KP+ +T VL AC +L +L G++IH YI
Sbjct: 282 SWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYI 341
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
H + + +L+ MY+KCG L ++ VF M ++D VSW+ MI +M+G+G +A+
Sbjct: 342 FRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEAL 401
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M +GV P+ TFTGVLS CSH LVDEG++ D MS+D + P+ H+ C+VD+
Sbjct: 402 LLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDV 461
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
L RAG L++AY+ I M ++P + W LLG CR++K+V LG L E+++ G+Y
Sbjct: 462 LSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNY 521
Query: 340 VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY 399
VLL N+ S W + E R+ M ++G+ PGCS I ++ VH FVV D S+ + +EIY
Sbjct: 522 VLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIY 581
Query: 400 QMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVA 459
+ LD + ++++IAGY+ L ++ EEK L HSEKLA+AFGVL ++IRV
Sbjct: 582 RFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVF 641
Query: 460 KNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KNLRIC DCHN K ++ + ++I+RD LRFHHFR+G CSC D+W
Sbjct: 642 KNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 163/396 (41%), Gaps = 66/396 (16%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPT---------------------NPFACSFAI--- 37
++ YS S + +LF+K+ Q +PT N F +
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77
Query: 38 --------KCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD 89
K C +M ++H +R G+ D L L+D+Y S A +F+
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+P RD ++W + SCY+ R+AL F + +G +P+ VT +L AC L L
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGL--NGERPNSVTVSSILPACTDLKDL 195
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G ++H ++ +G G + + ++L+ MY+ C S+ A VF M +D VSW+ +I+
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+N + FG M GV + ++ V+ C G ++ + L RM ++ G PN
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM-QNSGFKPN 314
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
IT V P T +L G +IH + + H
Sbjct: 315 ----------------------QITITSVLPACTNLESLRGGKQIHGY------IFRHWF 346
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
Q+ L+ +Y+ GD E + + M ++
Sbjct: 347 ---FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKR 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
L L + +YS A LFD+IPQ D W +LIS ++ R+ +A+ +++
Sbjct: 8 SLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYND 67
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
R ++ +PD + L V +ACA L + +++H G+ S + L N+LI MY KC
Sbjct: 68 F-RHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKC 126
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
A VF+GMP +DV+SW++M S G R+A+ +F M G P+ T + +L
Sbjct: 127 RCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSIL 186
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
AC+ + G + ++ G+ N+ +V++ + QA + SM + D
Sbjct: 187 PACTDLKDLKSGREVHGFVVRN-GMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS-RRD 244
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLI 329
+ W L+ A ++K G V ++
Sbjct: 245 TVSWNVLITAYFLNKECEKGLSVFGRMM 272
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/437 (44%), Positives = 271/437 (62%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T ++ Y F + A +LF E+ R V WN +I+ Y+ N R D L LF + E+G
Sbjct: 201 TAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTM--LETG 258
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
KP+ ++ VL C++L AL+ G+++H+ + + S SL++MYSKCG L A+
Sbjct: 259 VKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAW 318
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
E+F +P KDVV W+AMISG A +G G+ A+ F M++ G+ PD TF VL AC+H G
Sbjct: 319 ELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LVD G+ + + M +DFGI HY C+VDLLGRAG L +A LI SM KP I+ TL
Sbjct: 379 LVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTL 438
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGACRIHK++ L E ++L+EL + YV L N+Y++ W+ V +R M + +
Sbjct: 439 LGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVV 498
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I + VVH F D HP + I++ L ++ K++K+AGYV ++ LH++G E
Sbjct: 499 KIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEE 558
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
K L +HSEKLAIAFG+L P G IRV KNLR+C DCH+ K +S + RE+I+RD
Sbjct: 559 LKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDT 618
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHF++G CSC DYW
Sbjct: 619 TRFHHFKDGFCSCRDYW 635
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E+G LF M + + N + + + C +L G Q+H V +
Sbjct: 234 MIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCP 293
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D+ T+L+ +YS +A +LF +IP++D V WN +IS Y ++ + AL LFD
Sbjct: 294 LSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFD 353
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ +E G KPD +T + VL AC H G ++ G + + + G +K ++ +
Sbjct: 354 EMKKE--GLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLG 411
Query: 180 KCGSLGMAFEVFKGMPEK 197
+ G L A ++ K MP K
Sbjct: 412 RAGKLSEAVDLIKSMPFK 429
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 132/315 (41%), Gaps = 53/315 (16%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCY 106
G + RV D + +++ ++ FE A +LF++IPQ +TV++N++++C+
Sbjct: 55 GDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACH 114
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
+ DA FD++ ++
Sbjct: 115 WHHLGVHDARGFFDSMPLKDVAS------------------------------------- 137
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
N++I+ ++ G +G A +F MPEK+ VSWSAM+SG G A+E F A
Sbjct: 138 ----WNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAP 193
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
V T+T +++ G V+ MS + N G V + GRA
Sbjct: 194 MRSVI----TWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVEN--GRAEDG 247
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LL 343
+ ++ + GVKP++ ++L C + LG++V H + K S D L+
Sbjct: 248 LRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQV--HQLVCKCPLSSDTTAGTSLV 305
Query: 344 NLYSSVGDWEKVKEL 358
++YS GD + EL
Sbjct: 306 SMYSKCGDLKDAWEL 320
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A FD +P +D +WN +IS + +A LF + + V+ + A
Sbjct: 122 DARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYV---A 178
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM---YSKCGSLGMAFEVFKGMPEKDV 199
C L A E Y + M + AM Y K G + +A +F+ M + +
Sbjct: 179 CGDLDA----------AVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTL 228
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
V+W+AMI+G NG D + F M GV P+ + T VL CS+ + G
Sbjct: 229 VTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQL 288
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
+ K + + +V + + G L A++L + K D W ++ H
Sbjct: 289 VCK-CPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK-DVVCWNAMISGYAQH---G 343
Query: 320 LGERVIEHLIELKAQ 334
G++ + E+K +
Sbjct: 344 AGKKALRLFDEMKKE 358
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 155 IHRYISEHGYGSKMN-----LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ +Y+S H + + N N LIA Y +CG + A VF+ M K V+W+++++
Sbjct: 23 LSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAF 82
Query: 210 AMN-GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
A GH A + F + + P+ ++ +L+ H V + F D M L
Sbjct: 83 AKKPGHFEYARQLFEKIPQ----PNTVSYNIMLACHWHHLGVHDARGFFDSMP-----LK 133
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
++ + ++ L + GL+ +A +L ++M K
Sbjct: 134 DVASWNTMISALAQVGLMGEARRLFSAMPEK 164
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 301/506 (59%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ SS E +F + +++ I +P ++ C +++ Q+H +R+G
Sbjct: 438 IITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNG 497
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD + ++D+Y + + + K+F+ + Q+D V W +I+CY + +AL LF
Sbjct: 498 L-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFA 556
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + +PD V + +L A L +L G+++H ++ + + + +SL+ MYS
Sbjct: 557 EM--QSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSG 614
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +VF + KD+V W+AMI+ M+GHG+ AI+ F M + GV PD +F +
Sbjct: 615 CGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLAL 674
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH LV+EG +LD M + + P HY CVVDLLGR+G ++AY+ I SM +KP
Sbjct: 675 LYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKP 734
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
S +W +LLGACR+HK+ L L+EL+ G+YVL+ N+++ +G W KE+R
Sbjct: 735 KSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRA 794
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEIT 419
++E+GL+ P CS I + VH F D SH I L EI ++L K GY +
Sbjct: 795 RISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTR 854
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S LH++ EEK + L HSE+LAI+FG++ T PG +R+AKNLR+C DCH F K++S ++
Sbjct: 855 SVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLF 914
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+R++++RD RFHHF G CSC D+W
Sbjct: 915 DRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 170/371 (45%), Gaps = 36/371 (9%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ LF M++ + N + ++ C + L G ++HA +L+ G +++ Q L+
Sbjct: 249 QALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALL 307
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+Y+ + A ++F EI ++D ++WN ++SCY++N +A+ + R G +PD
Sbjct: 308 VMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR--GGFQPD 365
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ + A HLG L G+++H Y + S + N+L+ MY KC + + VF
Sbjct: 366 HACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFD 425
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS------- 245
M KD +SW+ +I+ A + +A+E F Q+ G+ D +L ACS
Sbjct: 426 RMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILL 485
Query: 246 ----HCGLVDEGMMFL---DRMSKDFGILPNIHH---------------YGCVVDLLGRA 283
HC + G++ L +R+ +G ++H + +++ +
Sbjct: 486 AKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANS 545
Query: 284 GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDY 339
GLL++A L M V+PDS ++LGA + G+ V LI E
Sbjct: 546 GLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIV 605
Query: 340 VLLLNLYSSVG 350
L+++YS G
Sbjct: 606 SSLVDMYSGCG 616
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 11/307 (3%)
Query: 49 GLQIHARVLRDGYQL--DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
G+Q+HA + G D L T L+ +Y + +A LFD + R +WN LI Y
Sbjct: 77 GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAY 136
Query: 107 IRNQRTRDALCLFDNLN-REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ + +AL ++ + SG PD T VL+A G G ++H +HG
Sbjct: 137 LSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLD 196
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ N+LIAMY+KCG L A VF+ M + +DV SW++MISG NG A++ F
Sbjct: 197 RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRG 256
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
MQRA + + T GVL C+ ++ G + K G NI +V + + G
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKS-GSEVNIQCNALLV-MYTKCG 314
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLL 343
+D A ++ + K D W ++L +C + L IE + E L+ D+ ++
Sbjct: 315 RVDSALRVFREIDEK-DYISWNSML-SCYVQN--GLYAEAIEFISEMLRGGFQPDHACIV 370
Query: 344 NLYSSVG 350
+L S+VG
Sbjct: 371 SLSSAVG 377
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 13/260 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMG----GLQIHAR 55
++ AY S S E ++ MR P C+ A +K + G G ++H
Sbjct: 132 LIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLA--SVLKASGVEGDGRCGCEVHGL 189
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRD 114
++ G + + L+ +Y+ A ++F+ + RD +WN +IS ++N
Sbjct: 190 AVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQ 249
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL-CNS 173
AL LF + R + + T + VLQ C L L G ++H + + G S++N+ CN+
Sbjct: 250 ALDLFRGMQR--AVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG--SEVNIQCNA 305
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+ MY+KCG + A VF+ + EKD +SW++M+S NG +AIE M R G PD
Sbjct: 306 LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD 365
Query: 234 DQTFTGVLSACSHCGLVDEG 253
+ SA H G + G
Sbjct: 366 HACIVSLSSAVGHLGWLLNG 385
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 25/213 (11%)
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY--GSKMNL 170
R AL L L + G P VL A A+ G ++H + G G L
Sbjct: 41 RQALRL---LTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFL 97
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ---R 227
L+ MY KCG + A +F GM + V SW+A+I +G +A+ + AM+
Sbjct: 98 ATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAA 157
Query: 228 AGVFPDDQTFTGVLSAC-----SHCGLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDL 279
+GV PD T VL A CG G+ LDR + + N ++ +
Sbjct: 158 SGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST----FVAN-----ALIAM 208
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ G+LD A ++ M D W +++ C
Sbjct: 209 YAKCGILDSAMRVFELMHDGRDVASWNSMISGC 241
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/532 (37%), Positives = 300/532 (56%), Gaps = 33/532 (6%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y S +E F L E+MR++ + N +K C +L G QIHA + + G++ D
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESD 420
Query: 65 SQLMTTLMDLYSTFEKSFEA------------------------C-------KLFDEIPQ 93
L T + ++Y+ +EA C K+F E+
Sbjct: 421 RSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMST 480
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
R+ V+WN++I+ Y ++ L ++ E G +PD VT + +L+AC L ALE G+
Sbjct: 481 RNVVSWNLMIAGYAQSGDIAKVFELLSSMKVE--GFQPDRVTIISILEACGALSALERGK 538
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+H + G S + SLI MYSKCG + A VF + +D V+W+AM++G +G
Sbjct: 539 LVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHG 598
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
G +A++ F M + V P++ TFT V+SAC GLV EG M +DF + P HY
Sbjct: 599 IGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHY 658
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
GC+VDLLGRAG L +A + I M +PD ++W LLGAC+ H +V L E H++ L+
Sbjct: 659 GCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEP 718
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
+ YV L N+Y+ G W+ ++R+ M++KGL+ G S+I + G +H FV +D +HP
Sbjct: 719 SNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHP 778
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
I+ I+ L+ + K++K AGY ++ LH++ +K AL +HSEKLAIA+G+L TPPG
Sbjct: 779 EIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPG 838
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T IR+ KNLR+C DCH K +S + RE++ RD RFH+F+ G CSC D+W
Sbjct: 839 TPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 12/373 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ ++ P + F FE+M+ I N +K C + L +IH V G
Sbjct: 150 MIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASG 209
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ +YS + AC++F ++ +R+ V+W +I ++++ +A L++
Sbjct: 210 METDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYE 269
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G P+ VT + +L +C AL G +IH +ISE G + + + N+LI MY K
Sbjct: 270 KM--LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCK 327
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG-----RDAIESFGAMQRAGVFPDDQ 235
C + A E F M ++DV+SWSAMI+G A +G+ + + M+R GVFP+
Sbjct: 328 CNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKV 387
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF +L ACS G +++G +SK G + + ++ + G + +A Q+ +
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISK-VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M K + W +LL +T E+V E+ + + L++ Y+ GD KV
Sbjct: 447 MENK-NVVAWASLLTMYIKCGDLTSAEKVFS---EMSTRNVVSWNLMIAGYAQSGDIAKV 502
Query: 356 KELREFMNEKGLQ 368
EL M +G Q
Sbjct: 503 FELLSSMKVEGFQ 515
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 181/404 (44%), Gaps = 53/404 (13%)
Query: 20 KMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
K R + +N + C I+ C K G +H ++ G +D L +L++ YS F
Sbjct: 70 KQRGLLVNSNTYGC--IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFG 127
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
++F + RD V W+ +I+ Y N A F+ + +++ +P+ +T L +
Sbjct: 128 DVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM--KDANIEPNRITFLSI 185
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L+AC + LE +IH + G + + + +LI MYSKCG + +A E+F+ M E++V
Sbjct: 186 LKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNV 245
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-------------SH 246
VSW+A+I A + +A E + M +AG+ P+ TF +L++C SH
Sbjct: 246 VSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSH 305
Query: 247 ----------------------CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
C + + DRMSK ++ + ++ ++G
Sbjct: 306 ISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKR-----DVISWSAMIAGYAQSG 360
Query: 285 L-----LDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
LD+ +QL+ M GV P+ + ++L AC +H + G ++ + ++ +
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESD 420
Query: 337 GDY-VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK 379
+ N+Y+ G + +++ M K + T+ +K
Sbjct: 421 RSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIK 464
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S + F L M+ + + ++ C +L G +HA ++ G
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLG 548
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + T+L+ +YS + EA +FD+I RDTVAWN +++ Y ++ +A+ LF
Sbjct: 549 LESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFK 608
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH---GYGSKMNLCNSLIAM 177
+ +E P+++T V+ AC G ++ G +I R + E G + C ++ +
Sbjct: 609 RMLKER--VPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGC--MVDL 664
Query: 178 YSKCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G L A E + MP E D+ W A++
Sbjct: 665 LGRAGRLQEAEEFIQRMPCEPDISVWHALL 694
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/460 (40%), Positives = 276/460 (60%), Gaps = 2/460 (0%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
LM IH L+ + + + T L +YS + A KLFDE P++ +WN +IS
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y +N T DA+ LF + + E P +TC +L ACA LGAL G+ +H + +
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITC--ILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + + +LI MY+KCGS+ A +F M +K+ V+W+ MISG ++G G++A+ F M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+G+ P TF VL ACSH GLV EG + M +G P++ HY C+VD+LGRAG
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 572
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
L +A Q I +M ++P S++W TLLGACRIHK L V E L EL G +VLL N+
Sbjct: 573 LQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 632
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
+S+ ++ + +R+ ++ L PG + I + H F D SHP++ EIY+ L+++
Sbjct: 633 HSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
+++ AGY E LH++ EE+ + HSE+LAIAFG++AT PGT IR+ KNLR+C
Sbjct: 693 EGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVC 752
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+DCH K++S + R +++RD RFHHF++G CSC DYW
Sbjct: 753 LDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 187/437 (42%), Gaps = 45/437 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S++ SP +F +R+ + N +FAI F G IH + + D
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + L + ++ +Y F + +A K+FD +P++DT+ WN +IS Y +N+ +++ +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+L ES + D T L +L A A L L G +IH ++ G S + I++YS
Sbjct: 209 RDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + M +F+ + D+V+++AMI G NG ++ F + +G T
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327
Query: 240 VLSACSHCGL-------------------------VDEGMMFLDRMSKDFGILP--NIHH 272
++ H L V + ++ K F P ++
Sbjct: 328 LVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ ++ + GL + A L M P+ +L AC ++LG + + L+
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLV 446
Query: 330 ELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKGVVHEFV 386
ES YV L+ +Y+ G + + L + M +K T S GL G E
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE-- 504
Query: 387 VDDVSHPRINEIYQMLD 403
+N Y+ML+
Sbjct: 505 -------ALNIFYEMLN 514
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E+ LF +M++ NP + + C + +L G +H V
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF- 119
++ + T L+ +Y+ EA +LFD + +++ V WN +IS Y + + ++AL +F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMY 178
+ LN SG P VT L VL AC+H G ++ G++I + I +G+ + ++ +
Sbjct: 511 EMLN---SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G L A + + M E W ++
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 140/358 (39%), Gaps = 47/358 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q HA+++ G++ D L+T L S + A +F + + D +NVL+ + N+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+L +F +L R+ + KP+ T + A + G IH G S++ L
Sbjct: 98 SPHSSLSVFAHL-RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG------- 223
++++ MY K + A +VF MPEKD + W+ MISG N ++I+ F
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 224 -----------------------AMQ------RAGVFPDDQTFTGVLSACSHCGLVDEGM 254
MQ + G + D TG +S S CG + G
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
K P+I Y ++ G + + L + + TL+ +
Sbjct: 277 ALFREFRK-----PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 315 HKHVTLGERVIEHLIELKAQ---ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
H+ L + H LK+ + L +YS + + E ++L + EK L +
Sbjct: 332 SGHLMLIYAI--HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%), Gaps = 17/226 (7%)
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+ H I HG+ + ++L L S G++ A ++F + DV ++ ++ G ++N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 214 HGRDAIESFGAMQRA-GVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGIL 267
++ F ++++ + P+ T+ +SA S G V G +D + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
NI V + + ++ A ++ M K D+ +W T++ R ++ +V
Sbjct: 158 SNI------VKMYFKFWRVEDARKVFDRMPEK-DTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
LI ++ D LL++ +V + ++ELR M L T GC
Sbjct: 211 LIN-ESCTRLDTTTLLDILPAVAE---LQELRLGMQIHSLATKTGC 252
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 302/507 (59%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCM--KFCSLMGGLQIHARVLR 58
M+ Y + S +E LF+ M+ P + ++ + M + L G ++H + +
Sbjct: 388 MINVYIQNGSFDEAMKLFKMMKTD---VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK 444
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ + + TL+D+Y+ + ++ K+F+ + RD + WN +I+ + ++ L +
Sbjct: 445 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 504
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ E G PD T L +L C+ L A G++IH I + G S + + N LI MY
Sbjct: 505 ISRMRTE--GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 562
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCGSL +F+VFK M KDVV+W+A+IS M G G+ A+ +FG M+ AG+ PD F
Sbjct: 563 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 622
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
++ ACSH GLV+EG+ + RM KD+ I P I HY CVVDLL R+ LLD+A I SM +
Sbjct: 623 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 682
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KPDS+IW LL ACR+ + ERV E +IEL ++G YVL+ N+Y+++G W++V+ +
Sbjct: 683 KPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSI 742
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ + +GL+ PGCS + ++ V+ F + E+ ++L + + GY+A +
Sbjct: 743 RKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANL 802
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ +EK + L HSE+LAIAFG+L T PGT ++V KNLR+C DCH K +S +
Sbjct: 803 QFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKI 862
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC DYW
Sbjct: 863 VQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E ++ + R + + + S ++ C S+ G IH + + G
Sbjct: 187 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 246
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ +Y F + ++FD++ RD V+WN +I Y + +++ LF
Sbjct: 247 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM 306
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD +T +LQAC HLG LEFG+ +H Y+ GY N LI MY+K
Sbjct: 307 EMVNQ---FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 363
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L + EVF GM KD VSW++MI+ NG +A++ F M + V PD T+ +
Sbjct: 364 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVML 422
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS + G + G ++K G NI +VD+ + G + + ++ +M +
Sbjct: 423 LSMSTQLGDLHLGKELHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR- 480
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHL 328
D W T++ +C + LG R+I +
Sbjct: 481 DIITWNTIIASCVHSEDCNLGLRMISRM 508
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 13/362 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA + + E L+ + ++ R+ + + I C IH RVL G
Sbjct: 86 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG 145
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL-- 118
+ D + L+D+Y F +A K+F+E+P RD V+WN LIS Y N +AL +
Sbjct: 146 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 205
Query: 119 -FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
F NL G PD T VL+AC LG++E G+ IH I + G + + N L++M
Sbjct: 206 RFRNL-----GVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 260
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQT 236
Y K L +F M +D VSW+ MI G + G ++I+ F M+ F PD T
Sbjct: 261 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF--MEMVNQFKPDLLT 318
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
T +L AC H G ++ G D M G + ++++ + G L + ++ + M
Sbjct: 319 ITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGM 377
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
K DS W +++ + ++ + + +S YV+LL++ + +GD K
Sbjct: 378 KCK-DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGK 436
Query: 357 EL 358
EL
Sbjct: 437 EL 438
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 11/330 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD-EIPQRDTVAWNVLISCYIRN 109
++H+ ++ G L+ Y+ F + +F P + WN +I N
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+AL L+ R +PD T V+ ACA L E + IH + + G+GS +
Sbjct: 94 GLFSEALSLYSETQRIR--LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLY 151
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N+LI MY + L A +VF+ MP +DVVSW+++ISG NG+ +A+E + + G
Sbjct: 152 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 211
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V PD T + VL AC G V+EG + + K GI ++ ++ + + L
Sbjct: 212 VVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK-IGIKKDVIVNNGLLSMYCKFNGLIDG 270
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS- 348
++ M ++ D+ W T++ + V L E I+ +E+ Q D + + ++ +
Sbjct: 271 RRIFDKMVLR-DAVSWNTMICG---YSQVGLYEESIKLFMEMVNQFKPDLLTITSILQAC 326
Query: 349 --VGDWEKVKELREFMNEKGLQTTPGCSTI 376
+GD E K + ++M G + S I
Sbjct: 327 GHLGDLEFGKYVHDYMITSGYECDTTASNI 356
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/507 (40%), Positives = 303/507 (59%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS E LF +M + N F + + C G QIH+ ++
Sbjct: 134 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 193
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + ++L+D+Y+ + +A +F +P+RD VA +IS Y + +AL LF
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G + VT VL A + L AL G+++H ++ G S + L NSLI MYSK
Sbjct: 254 QLQIE--GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSK 311
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTG 239
CG++ A +F MPE+ +SW+AM+ G + +G R+ +E F M+ V PD T+
Sbjct: 312 CGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLA 371
Query: 240 VLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH L D G+ +F + ++ GI P+I HYGCVVDLLGRAG +++A+ I M
Sbjct: 372 VLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPF 431
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
P + IW +LLG+CR+H V +G V + L+EL+ + +G+YV+L NLY+S G WE ++ +
Sbjct: 432 VPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNI 491
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M EK + PG S + L +VH F D +HPR E+ + E++ + K GYV ++
Sbjct: 492 RDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDL 551
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+AFG++ATP GTTIRV KNLRICVDCH+FAK +S +
Sbjct: 552 SCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRL 611
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y R VI+RD+ RFH+ G CSC DYW
Sbjct: 612 YARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%), Gaps = 8/272 (2%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C+ ++ G ++H +++ Y L T L+ LY+ + +A +FDE+PQR+ V+W
Sbjct: 72 CVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSW 131
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+IS Y + +AL LF + R ++ +P+ T +L +C E G +IH
Sbjct: 132 TAMISAYSQRGFAFEALNLFVEMLRSDT--EPNHFTFATILTSCYGSLGFETGRQIHSIA 189
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ Y S M + +SL+ MY+K G + A VF +PE+DVV+ +A+ISG A G +A+
Sbjct: 190 IKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEAL 249
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
+ F +Q G+ + T+ VL+A S ++ G + + G + ++D+
Sbjct: 250 KLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS-GQYSYVVLLNSLIDM 308
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTI--WRTLL 309
+ G + A ++ SM P+ T W +L
Sbjct: 309 YSKCGNVCYARRIFDSM---PERTCISWNAML 337
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 40/264 (15%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L C A+ G+++H ++ + Y + L LI +Y+KC LG A +F MP+++
Sbjct: 68 ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HC 247
VVSW+AMIS + G +A+ F M R+ P+ TF +L++C H
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 187
Query: 248 GLVD---EGMMF-----LDRMSKD---------FGILPNIHHYGCVVDLLGRA--GLLDQ 288
+ E MF LD +K F LP C + G A GL ++
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247
Query: 289 AYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN- 344
A +L + G+ +S + ++L A + G++V H++ Q S YV+LLN
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLR-SGQYS--YVVLLNS 304
Query: 345 ---LYSSVGDWEKVKELREFMNEK 365
+YS G+ + + + M E+
Sbjct: 305 LIDMYSKCGNVCYARRIFDSMPER 328
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 293/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +++S + E LF M ++ + + A K L G QIHA V++
Sbjct: 471 MMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMR 530
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D +++ ++D+Y + A K+F++IP D VAW +IS + N AL +
Sbjct: 531 FHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYH 590
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G +PD+ T +++AC+ L ALE G++IH I + + SL+ MY+K
Sbjct: 591 QMRL--AGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAK 648
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A+ +F+ M + V W+AMI GLA +G+ +A+ F M+ GV PD TF GV
Sbjct: 649 CGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGV 708
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL + D M K +G+ P I HY C+VD L RAG + +A ++++SM +
Sbjct: 709 LSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEA 768
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+T++RTLL ACR+ GERV E L + +S YVLL N+Y++ WE R
Sbjct: 769 SATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARN 828
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ PG S I +K VH FV D SH + IY ++ + K++K GYV +
Sbjct: 829 MMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEF 888
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ E+K +ALSYHSEKLAIA+G++ TPP TT+RV KNLR+C DCHN K +S V+
Sbjct: 889 ALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQ 948
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR G CSC DYW
Sbjct: 949 REIVLRDANRFHHFRSGICSCGDYW 973
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 16/242 (6%)
Query: 18 FEKMRQKRIPTN--PFACSFAIKCCMKFCSLMGG----LQIHARVLRDGYQLD-SQLMTT 70
F+++R+ R+ + P MK MG L + + R G + D + T
Sbjct: 170 FQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTI 229
Query: 71 LMDL--YSTFEKSFE-----ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
LM + + FE+ E A KLF D WN +S Y++ +A+ F ++
Sbjct: 230 LMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI 289
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ C D +T +++L A L LE G++IH + G+ +++ NS I MY K GS
Sbjct: 290 KSRVPC--DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ A +F M E D++SW+ +ISG A +G ++ F + R+G+ PD T T VL A
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRA 407
Query: 244 CS 245
CS
Sbjct: 408 CS 409
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 158/387 (40%), Gaps = 41/387 (10%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
F M + R+P + + L G QIH V+R G+ + + +++Y
Sbjct: 285 FRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVK 344
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
A ++F ++ + D ++WN +IS R+ +L LF +L R SG PD T
Sbjct: 345 AGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR--SGLLPDQFTIT 402
Query: 138 LVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL+AC+ L + G ++H + G + +LI +YSK G + A +F
Sbjct: 403 SVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDG 462
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF------------------- 237
D+ SW+AM+ G ++ + R+A+ F M G D TF
Sbjct: 463 FDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI 522
Query: 238 ----------------TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
+G+L CG + +++ + GCV +
Sbjct: 523 HAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEE 582
Query: 282 RAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYV 340
L Y + GV+PD + TL+ AC + + G+++ ++++L A +
Sbjct: 583 EQALF--TYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMT 640
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGL 367
L+++Y+ G+ E L MN + +
Sbjct: 641 SLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 33/301 (10%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E F++F +RQ + T S K C+ + S + ++ G Q D + L+
Sbjct: 105 EAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALV 164
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ F++ EA LFD +P RD V WNV++ Y+ + L LF +R SG +PD
Sbjct: 165 NIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHR--SGLRPD 222
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
V+ +L E R + + Y +K+ +C+
Sbjct: 223 CVSVRTILMGVGKKTVFE------RELEQVRAYATKLFVCDD------------------ 258
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ DV W+ +S G G +A++ F M ++ V D T+ +LS + ++
Sbjct: 259 ----DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLE 314
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + + FG + +++ +AG ++ A ++ M + D W T++
Sbjct: 315 LGKQIHGAVVR-FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISG 372
Query: 312 C 312
C
Sbjct: 373 C 373
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLI 103
L+ G + HA ++ G D + L+ +Y+ F A KLFD PQ RD V +N ++
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 104 SCYIRN------QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
+ Y ++T +A +F L + ++ L L C G+ E +
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKL--CLLYGSPSASEALQG 146
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
Y + G + + +L+ +Y+K + A +F MP +DVV W+ M+ G G +
Sbjct: 147 YAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 218 AIESFGAMQRAGVFPD 233
+ F A R+G+ PD
Sbjct: 207 VLGLFSAFHRSGLRPD 222
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMI 206
L G++ H I G + N+LI MY+KCGSL A ++F P+ +D+V+++A++
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 207 SGLAMNGHGRD------AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
+ A G D A F ++++ + T + + C G L
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG-SPSASEALQGY 147
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ G+ ++ G +V++ + + +A L M V+ D +W ++ A
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DVVLWNVMMKA 197
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 288/497 (57%), Gaps = 36/497 (7%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF M + + + F + C + + +H+ +++ G++ + L
Sbjct: 323 EEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNAL 382
Query: 72 MDLYST---FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
+D+Y+ F+ +F+ +F+++ +D ++W L++ + N +AL LF + G
Sbjct: 383 VDMYAKRGYFDYAFD---VFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI--MG 437
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
PD + VL ACA L LEFG+++H + G GS +++ NSL++MY+KCG + A
Sbjct: 438 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 497
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+VF M +DV++W+A+I G A NG GRD H G
Sbjct: 498 KVFDSMEIQDVITWTALIVGYAQNGRGRD----------------------------HAG 529
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LV+ G + M + +GI P HY C++DLLGR+G L +A +L+ M V+PD+T+W+ L
Sbjct: 530 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 589
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACR+H +V LGER +L EL+ + + YVLL NLYS+ G WE+ + R M +G+
Sbjct: 590 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 649
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PGCS I + VH F+ +D SHPR EIY +DEI +K AGYV ++ LH++ E
Sbjct: 650 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEE 709
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
K L+YHSEKLA+AFG+L PPG IR+ KNLRIC DCH K +SGV++R VI+RD
Sbjct: 710 GKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 769
Query: 489 LRFHHFREGRCSCNDYW 505
FHHFREG CSC+DYW
Sbjct: 770 NCFHHFREGACSCSDYW 786
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y E LF +M+ + N F ++ C + L G QIHA ++
Sbjct: 109 LISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQ 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
+ ++ ++T L+D+Y+ + EA LF+ P +R+ V W +++ Y +N A+ F
Sbjct: 169 FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ E G + + T +L AC + A FG ++H I G+G+ + + ++L+ MYS
Sbjct: 229 RDMRGE--GIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYS 286
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A + + M D VSW++MI G G G +A+ F M + D+ T+
Sbjct: 287 KCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPS 346
Query: 240 VLSACSHCGLVDEGMMFLDRMSKD----FGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
VL+ S + M + K + ++ N +VD+ + G D A+ +
Sbjct: 347 VLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNN-----ALVDMYAKRGYFDYAFDVFEK 401
Query: 296 MGVKPDSTIWRTLLGAC 312
M K D W +L+ C
Sbjct: 402 MTDK-DVISWTSLVTGC 417
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 146/310 (47%), Gaps = 20/310 (6%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ + EA KLF E P R + W+ LIS Y R +AL LF + E G
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYE--G 133
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+P+ T VL+ C+ LE G++IH + + + S + L+ MY+KC + A
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193
Query: 189 EVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--- 244
+F+ P+K + V W+AM++G + NG G AIE F M+ G+ + TF +L+AC
Sbjct: 194 YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
S CG + + R G N+ +VD+ + G L A +++ +M V D
Sbjct: 254 SACGFGAQVHGCIVRS----GFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD-DPVS 308
Query: 305 WRTLLGACRIHKHVTLGERV-----IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
W +++ C LGE I HL +K E Y +LN +S V D +
Sbjct: 309 WNSMIVGC---VRQGLGEEALSLFRIMHLRHMKIDEF-TYPSVLNCFSFVMDMRNAMSVH 364
Query: 360 EFMNEKGLQT 369
+ + G +
Sbjct: 365 SLIVKTGFEA 374
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 32/209 (15%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
+ S EE LF +MR I + + + C + L G Q+HA L+ G +
Sbjct: 420 NGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSV 479
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+L+ +Y+ +A K+FD + +D + W LI Y +N R RD
Sbjct: 480 DNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD------------- 526
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGM 186
H G +E G + + E +G +I + + G L
Sbjct: 527 -----------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLME 569
Query: 187 AFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
A E+ M + D W A+++ ++G+
Sbjct: 570 AKELLNQMAVQPDATVWKALLAACRVHGN 598
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 31/144 (21%)
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV- 199
+ C L E I R+++ G + N +++ SKCG + A ++F MP++D
Sbjct: 14 KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDEC 73
Query: 200 ------------------------------VSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
++WS++ISG G +A+E F MQ G
Sbjct: 74 SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133
Query: 230 VFPDDQTFTGVLSACSHCGLVDEG 253
P+ T+ VL CS L+++G
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKG 157
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 304/506 (60%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSS-PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ AY S +E LF KM I N F+ S +K C G Q+++ ++
Sbjct: 324 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 383
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + +L+ +Y+ + +A K FD + +++ V++N ++ Y +N ++ +A LF
Sbjct: 384 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 443
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + ++G T +L A +GA+ GE+IH + + GY S +CN+LI+MYS
Sbjct: 444 NEI--ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 501
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG++ AF+VF M +++V+SW++MI+G A +G A+E F M G P++ T+
Sbjct: 502 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 561
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH G++ EG + M K+ GI+P + HY C+VDLLGR+GLL +A + I SM +
Sbjct: 562 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 621
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D+ +WRTLLGACR+H + LG E ++E + + Y+LL NL++S G W+ V ++R
Sbjct: 622 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 681
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E+ L GCS I ++ VH F V + SHP+ +IYQ LD++ ++K GY+ +
Sbjct: 682 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 741
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K L HSEK+A+AFG+++T IR+ KNLR+C DCH K +S
Sbjct: 742 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 801
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHH + G CSCNDYW
Sbjct: 802 GREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 221/466 (47%), Gaps = 61/466 (13%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
F + M Q+ P + S +K C++F + G +H ++++ G +LDS ++ TL+
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 74 LYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
LYS + A +F+ + +RD V+W+ ++SC+ N A+ F L+ E G P+
Sbjct: 88 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTF--LDMLELGFYPN 145
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN--SLIAMYSK-CGSLGMAFE 189
+ V++AC++ GE I+ ++ + GY + ++C LI M+ K G LG A++
Sbjct: 146 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCELIDMFVKGSGDLGSAYK 204
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF MPE+++V+W+ MI+ A G RDAI+ F M+ +G PD T++ VLSAC+ GL
Sbjct: 205 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 264
Query: 250 VDEGMMF-------------------------------LDRMSKDFGILP--NIHHYGCV 276
+ G +D K F +P N+ + +
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 277 VDLLGRAGLLD-QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ ++G D +A +L M ++P+ + ++L AC GE+V + ++L
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 384
Query: 333 -AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
A + L+++Y+ G E ++ + + EK L V + +VD +
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL-------------VSYNAIVDGYA 431
Query: 392 -HPRINEIYQMLDEI-NKQLKIAGYV-AEITSELHNLGAEEKGNAL 434
+ + E + + +EI + + I+ + A + S ++GA KG +
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 477
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ +S + + F M + N + + I+ C G I+ V++ G
Sbjct: 117 MVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG 176
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSF-EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
Y + D + L+D++ A K+FD++P+R+ V W ++I+ + + RDA+ L
Sbjct: 177 YLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDL 236
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L+ E SG PD T VL AC LG L G+++H + G + + SL+ MY
Sbjct: 237 F--LDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMY 294
Query: 179 SKC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDD 234
+KC GS+ + +VF+ MPE +V+SW+A+I+ +G ++AIE F M + P+
Sbjct: 295 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNH 354
Query: 235 QTFTGVLSACSH 246
+F+ VL AC +
Sbjct: 355 FSFSSVLKACGN 366
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 292/505 (57%), Gaps = 23/505 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + +S E F M + I + F +K + G +H V++ G
Sbjct: 109 LIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ DS + +L+D+Y + +LFDE PQR+ +++ L++
Sbjct: 169 LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKA----------------ESILLWN 212
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
G +P+D+T + L AC +GAL+ GE+IH Y+S +G+ + +L+ MY+K
Sbjct: 213 -------GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAK 265
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A VF KD+++WS MI G A++G A++ F M+ AG+ PD+ F +
Sbjct: 266 CGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAI 325
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH G VD+G+ F + M D+ I P + HY +VDLLGRAG LD+A I SM + P
Sbjct: 326 LTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINP 385
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IW L ACR HK++ + E E L++L+ + G YV L N+Y++VG WE V+ +R
Sbjct: 386 DFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRT 445
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ PG S I ++G VH FV D +H R EI L+EI K GY+ E
Sbjct: 446 LMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAW 505
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LHN+ EEK +AL HSEKLA+AFG+++T PG+TIR+ KNLR+C DCH+ K S +
Sbjct: 506 VLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSR 565
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 566 REIILRDIKRFHHFKDGTCSCGDYW 590
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 17/227 (7%)
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+IH I H S + LI+ SL A +F+ ++ ++A+I GLA N
Sbjct: 58 QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSA-----------CSHCGLVDEGMMF--LDRM 260
++ F M R + PD T VL + C H G++ G+ F R+
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
S + I G + L + ++A ++ GV+P+ + L AC + +
Sbjct: 178 SL-VDMYVKIGELGFGLQLFDESPQRNKAESILLWNGVRPNDLTVVSALLACTKIGALQV 236
Query: 321 GERVIEHLIELKAQ-ESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
GER+ +L Q G L+++Y+ G+ + R F+ KG
Sbjct: 237 GERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSAS--RVFVETKG 281
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + E ++ + + F + C + L G + ++G
Sbjct: 598 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEG 657
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T +DLY + +A ++FD++ +D VAW ++ Y N R+AL LF
Sbjct: 658 VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF- 716
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + G KPD L AC LGAL+ G + R + + L +LI MY+K
Sbjct: 717 -LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 775
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A+ VF+ M +KD++ W+AMI GL M GH + A G M+++GV +D TF G+
Sbjct: 776 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 835
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +C+H GL+ +G + M+K + I P I HYGC+VDLL RAGLL +A+QL+ M +
Sbjct: 836 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 895
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ I LLG C+IH++ L E V++ LI L+ SG+YV+L N+YS+ G WE +LR
Sbjct: 896 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 955
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG++ P CS + +G VHEF V D SHP ++IY+ LDE+ ++K GY
Sbjct: 956 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 1015
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ EEK + L +HSEKLAIAF +L T PG TIRV KNLR+C DCH K++S + +
Sbjct: 1016 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 1075
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G CSCNDYW
Sbjct: 1076 REIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
L G Q+HAR L+ + ++T+L+ LY+ A ++FDE+P TV W LI+
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y+ R+A+ + N +G +PD T + VL ACA + L GE + R + G
Sbjct: 602 YMDAGDLREAVHVARNAF--ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + + + +Y KCG + A EVF M KD V+W AM+ G A NGH R+A++ F AM
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q G+ PD G LSAC+ G +D G + RM L N ++D+ + G
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGS 778
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
+A+ + M K D +W ++
Sbjct: 779 TVEAWVVFQQMR-KKDIIVWNAMI 801
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 304/506 (60%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSS-PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ AY S +E LF KM I N F+ S +K C G Q+++ ++
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 365
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + +L+ +Y+ + +A K FD + +++ V++N ++ Y +N ++ +A LF
Sbjct: 366 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 425
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + ++G T +L A +GA+ GE+IH + + GY S +CN+LI+MYS
Sbjct: 426 NEI--ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 483
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CG++ AF+VF M +++V+SW++MI+G A +G A+E F M G P++ T+
Sbjct: 484 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 543
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH G++ EG + M K+ GI+P + HY C+VDLLGR+GLL +A + I SM +
Sbjct: 544 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 603
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D+ +WRTLLGACR+H + LG E ++E + + Y+LL NL++S G W+ V ++R
Sbjct: 604 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 663
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E+ L GCS I ++ VH F V + SHP+ +IYQ LD++ ++K GY+ +
Sbjct: 664 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 723
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K L HSEK+A+AFG+++T IR+ KNLR+C DCH K +S
Sbjct: 724 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 783
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHH + G CSCNDYW
Sbjct: 784 GREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 221/466 (47%), Gaps = 61/466 (13%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
F + M Q+ P + S +K C++F + G +H ++++ G +LDS ++ TL+
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 74 LYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
LYS + A +F+ + +RD V+W+ ++SC+ N A+ F L+ E G P+
Sbjct: 70 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTF--LDMLELGFYPN 127
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN--SLIAMYSK-CGSLGMAFE 189
+ V++AC++ GE I+ ++ + GY + ++C LI M+ K G LG A++
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCELIDMFVKGSGDLGSAYK 186
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF MPE+++V+W+ MI+ A G RDAI+ F M+ +G PD T++ VLSAC+ GL
Sbjct: 187 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246
Query: 250 VDEGMMF-------------------------------LDRMSKDFGILP--NIHHYGCV 276
+ G +D K F +P N+ + +
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 277 VDLLGRAGLLD-QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ ++G D +A +L M ++P+ + ++L AC GE+V + ++L
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 366
Query: 333 -AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
A + L+++Y+ G E ++ + + EK L V + +VD +
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL-------------VSYNAIVDGYA 413
Query: 392 -HPRINEIYQMLDEI-NKQLKIAGYV-AEITSELHNLGAEEKGNAL 434
+ + E + + +EI + + I+ + A + S ++GA KG +
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 459
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ +S + + F M + N + + I+ C G I+ V++ G
Sbjct: 99 MVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG 158
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSF-EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
Y + D + L+D++ A K+FD++P+R+ V W ++I+ + + RDA+ L
Sbjct: 159 YLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDL 218
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L+ E SG PD T VL AC LG L G+++H + G + + SL+ MY
Sbjct: 219 F--LDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMY 276
Query: 179 SKC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDD 234
+KC GS+ + +VF+ MPE +V+SW+A+I+ +G ++AIE F M + P+
Sbjct: 277 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNH 336
Query: 235 QTFTGVLSACSH 246
+F+ VL AC +
Sbjct: 337 FSFSSVLKACGN 348
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + E ++ + + F + C + L G + ++G
Sbjct: 622 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEG 681
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T +DLY + +A ++FD++ +D VAW ++ Y N R+AL LF
Sbjct: 682 VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF- 740
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + G KPD L AC LGAL+ G + R + + L +LI MY+K
Sbjct: 741 -LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 799
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A+ VF+ M +KD++ W+AMI GL M GH + A G M+++GV +D TF G+
Sbjct: 800 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 859
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +C+H GL+ +G + M+K + I P I HYGC+VDLL RAGLL +A+QL+ M +
Sbjct: 860 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 919
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ I LLG C+IH++ L E V++ LI L+ SG+YV+L N+YS+ G WE +LR
Sbjct: 920 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 979
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG++ P CS + +G VHEF V D SHP ++IY+ LDE+ ++K GY
Sbjct: 980 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 1039
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ EEK + L +HSEKLAIAF +L T PG TIRV KNLR+C DCH K++S + +
Sbjct: 1040 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 1099
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G CSCNDYW
Sbjct: 1100 REIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
L G Q+HAR L+ + ++T+L+ LY+ A ++FDE+P TV W LI+
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y+ R+A+ + N +G +PD T + VL ACA + L GE + R + G
Sbjct: 626 YMDAGDLREAVHVARNAF--ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + + + +Y KCG + A EVF M KD V+W AM+ G A NGH R+A++ F AM
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 743
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q G+ PD G LSAC+ G +D G + RM L N ++D+ + G
Sbjct: 744 QAEGMKPDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGS 802
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
+A+ + M K D +W ++
Sbjct: 803 TVEAWVVFQQMR-KKDIIVWNAMI 825
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/509 (39%), Positives = 299/509 (58%), Gaps = 6/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM---RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
MV AY + E LF ++ + I + + I+ C L G +H +
Sbjct: 293 MVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAI 352
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+ G+ LD + TL+ +Y+ A + F+E+ RD V++ +IS Y++N + + L
Sbjct: 353 KSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLR 412
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+F L + SG P+ T VL ACAHL L +G H Y G+ + +CN+LI M
Sbjct: 413 MF--LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDM 470
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG + A +VF M ++ +VSW+ MI ++G G +A+ F MQ G+ PDD TF
Sbjct: 471 YAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTF 530
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
++SACSH GLV EG + + M++DFGI+P + HY C+VDLL RAGL + + I M
Sbjct: 531 ICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMP 590
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++PD +W LL ACR++K+V LGE V + + +L + +G++VLL N+YS+VG W+ +
Sbjct: 591 LEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQ 650
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV-SHPRINEIYQMLDEINKQLKIAGYVA 416
+R E+G + +PGCS I + GVVH F+ SHP++ +I LDE+ ++K GY A
Sbjct: 651 VRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQA 710
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
E + ++ EEK L YHSEKLAIAFG+L+ P I V KNLR+C DCH K +S
Sbjct: 711 ESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFIS 770
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V R++ +RD RFHHF++G C+C D+W
Sbjct: 771 LVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 174/409 (42%), Gaps = 57/409 (13%)
Query: 1 MVRAYSM-SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ +S+ S +E L +M Q + N + + SL G +IH +R
Sbjct: 191 MISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRR 249
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + T ++D+Y + A ++FD + ++ V W+ ++ Y+ R+AL L
Sbjct: 250 GFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALEL 309
Query: 119 F-DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
F L ++ VT V++ CA+L L G +H Y + G+ + + N+L++M
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSM 369
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG + A F M +D VS++A+ISG NG+ + + F MQ +G+ P+ T
Sbjct: 370 YAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429
Query: 238 TGVLSACSH-----------------------------------CGLVDEGMMFLDRMSK 262
VL AC+H CG +D DRM K
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVT 319
I + ++ G G+ +A L +M G+KPD + L+ AC V
Sbjct: 490 R-----GIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVA 544
Query: 320 LGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWEKVKELREFM 362
G ++ Q+ G Y +++L S G +++V E M
Sbjct: 545 EG----KYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKM 589
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 12/288 (4%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT-------LMDLYSTFEKSFEAC 85
C+ ++ C++ SL G IH +L+ ++ +T L+DLY + A
Sbjct: 12 CTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIAR 71
Query: 86 KLFDEIPQR--DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
+FD++P R + V WN+LI Y N +A+ L+ + G P+ T VL+AC
Sbjct: 72 HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM--LGYGITPNRFTFPFVLKAC 129
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ L G +IH I S + + +L+ Y+KCG L A EVF M ++DVV+W+
Sbjct: 130 SALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWN 189
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MISG +++ D + + V P+ T GVL A + + G +
Sbjct: 190 SMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKE-IHGFCVR 248
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + ++ ++D+ G+ +D A ++ MG+ + W ++GA
Sbjct: 249 RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 176/412 (42%), Gaps = 54/412 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ + EE L+ KM I N F F +K C G +IH + R
Sbjct: 90 LIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLR 149
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + T L+D Y+ +A ++FD++ +RD VAWN +IS + ++ + D +
Sbjct: 150 LESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARL- 208
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + ++ P+ T + VL A A + +L G++IH + G+ + + ++ +Y K
Sbjct: 209 -LVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGK 267
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQ------------- 226
C + A +F M K+ V+WSAM+ + R+A+E F +
Sbjct: 268 CQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVT 327
Query: 227 -------------------------RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
++G D +LS + CG+++ M F + M
Sbjct: 328 LATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMD 387
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHV 318
L + + ++ + G ++ ++ M G+ P+ ++L AC +
Sbjct: 388 -----LRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL 442
Query: 319 TLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGL 367
G H + + D ++ L+++Y+ G + +++ + M+++G+
Sbjct: 443 HYGS--CSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGI 492
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 299/573 (52%), Gaps = 70/573 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + + +F+ M I + + +K L G+QIHA V+R G
Sbjct: 108 MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVG 167
Query: 61 YQLDSQLMTTLMDLYST----------------------------------FEKSFEACK 86
L+ + L+ +Y F+ + E CK
Sbjct: 168 LDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCK 227
Query: 87 ----------------------------------LFDEIPQRDTVAWNVLISCYIRNQRT 112
+F ++ + V+WNV+I+ Y+ N
Sbjct: 228 EMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMP 287
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+A+ +F L E+ PD ++ VL AC L AL G +IH Y+ + L N
Sbjct: 288 AEAVDIF--LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLEN 345
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+LI MY+KCG L A EVF M +DVVSW++MIS MNG GRDA+ F MQ G+ P
Sbjct: 346 ALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNP 405
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D F VLSACSH GL+DEG + M+++ I+P I H+ C+VDLLGRAG +D+AY
Sbjct: 406 DSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGF 465
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
I M ++P+ +W LL ACR++ ++ +G + L +L ++SG YVLL N+Y+ G W
Sbjct: 466 IKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRW 525
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
E V +R M KG++ PG S L VH F+ D SHP+ +IY+ LD ++K A
Sbjct: 526 EDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEA 585
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV E S LH++ E+K L+ HSEKLAIAF +L T PG+ IR+ KNLR+C DCH A
Sbjct: 586 GYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAA 645
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S + RE+ IRD RFHHF G CSC DYW
Sbjct: 646 KLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 166/340 (48%), Gaps = 19/340 (5%)
Query: 51 QIHARVLRD-GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
++H+++ D + L LM Y+ + + +FDEIP+++ V +NV+I Y+ N
Sbjct: 56 KLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNN 115
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
DAL +F N+ G PD T VL+A + L G +IH + G +
Sbjct: 116 HLYSDALLVFKNMAGH--GIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVF 173
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N LI+MY KCG L A V MP +DVVSW+++++G A NG DA+E M+ G
Sbjct: 174 VGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG 233
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN--IHHYGCVVDLLGRAGLLD 287
+ PD T +L A ++ L + + F+ M F L N + + ++ + +
Sbjct: 234 LKPDAGTMASLLPAVTNTCL--DNVSFVKEM---FMKLANKSLVSWNVMIAVYMNNSMPA 288
Query: 288 QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--- 341
+A + M V PD+ ++L AC + LG R+ E+++ + Q + +L
Sbjct: 289 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQP--NLLLENA 346
Query: 342 LLNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
L+++Y+ G E +E+ + M + + + T S G+ G
Sbjct: 347 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 386
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ + + S + F LF+ M Q +P + + A++ C L G Q+HA + +
Sbjct: 195 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 254
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D +L+ +Y+ +A LFDE+ +DTV+++ L+S Y++N R +A +F
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 314
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +PD T + ++ AC+HL AL+ G H + G S+ ++CN+LI MY+
Sbjct: 315 KKM--QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 372
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + ++ +VF MP +D+VSW+ MI+G ++G G++A F M G PD TF
Sbjct: 373 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 432
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLV EG + M +G+ P + HY C+VDLL R G LD+AY+ I SM ++
Sbjct: 433 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 492
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +W LLGACR++K++ LG++V + EL + +G++VLL N+YS+ G +++ E+R
Sbjct: 493 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVR 552
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+G + +PGCS I + G +H FV D SHP+ EIY+ LD I +K GY + +
Sbjct: 553 IIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 612
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L +L EEK AL HSEKLAIA+G+L+ TI V KNLR+C DCH K +S V
Sbjct: 613 FVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVK 672
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+ G+CSC D+W
Sbjct: 673 RRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 13/300 (4%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M + R+ N + FA+K C G IH + G Q D + T L+D+Y
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
+A +F +P RD VAWN +++ Y + A+ ++ + +P+ T + +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 141 QACAHLGALEFGEKIHRYI------SEHGYGSKMN----LCNSLIAMYSKCGSLGMAFEV 190
A GAL G +H Y SK+ L +L+ MY+KCGSL A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQTFTGVLSACSHCGL 249
F MP ++ V+WSA+I G + A F AM G+ F + L AC+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ G ++K G+ ++ ++ + +AGL+DQA L M VK D+ + L+
Sbjct: 241 LRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALV 298
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P++ T L+AC+ L G IHR+ G + + + +L+ MY KC L A +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVLSACSHCG 248
F MP +D+V+W+AM++G A +G A+ +MQ + P+ T +L + G
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 249 LVDEGM----------MFLDRMSKDF---GILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+ +G + +R SK G+L ++D+ + G L A ++ +
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGT----ALLDMYAKCGSLLYARRVFDA 183
Query: 296 MGVKPDSTIWRTLLG 310
M + + T W L+G
Sbjct: 184 MPARNEVT-WSALIG 197
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 304/521 (58%), Gaps = 23/521 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +Y+ + P ++ ++R+ + F +K C + G +IH VL+ G
Sbjct: 130 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 189
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW----NVLISCYIRNQRTRDAL 116
D + LM +Y A +FD++ +RD V+W L+ Y + A
Sbjct: 190 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLAR 249
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-RYISEHGYGSKMNLCN--- 172
LF+ L ++ V+ ++ C LE G K+ R E+ + +++ + N
Sbjct: 250 QLFNGLTQKTV------VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKER 303
Query: 173 ---------SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+L+ MY+KCG + A +F +D+ W+A+I+G AM+G+G +A++ F
Sbjct: 304 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 363
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+R GV P+D TF G+L ACSH GLV EG ++M FG++P I HYGC+VDLLGRA
Sbjct: 364 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 423
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
GLLD+A+++I SM +KP++ +W L+ ACR+HK+ LGE L+E++ + G VL+
Sbjct: 424 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 483
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y++ W +R+ M G++ PG S I + G VHEF++ D SHP+I I +ML
Sbjct: 484 NIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLA 543
Query: 404 EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLR 463
E+ ++L AGYV + ++ L N+ EEK AL+YHSEKLA+AFG+++T P T IR+ KNLR
Sbjct: 544 EMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLR 603
Query: 464 ICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
+C DCH K+LS +Y R +I+RDR RFHHFREG CSC DY
Sbjct: 604 VCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 295/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + P E +F++MRQ + + A + L G IH V + G
Sbjct: 157 IISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLG 216
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ +L +Y+ A F+ + + + + WN +IS Y N +A+ LF
Sbjct: 217 LEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFR 276
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + D +T + A A +G+LE + YIS+ Y + LI MY+K
Sbjct: 277 EMITKN--IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAK 334
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A VF + +KDVV WS MI G ++GHG++AI + M++AGV P+D TF G+
Sbjct: 335 CGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGL 394
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+AC + GLV EG M D GI P+ HY CVVDLLGRAG L+QAY I SM +KP
Sbjct: 395 LTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 453
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W LL AC+IH+ V LGE E L L +G YV L NLY+S W +V +R
Sbjct: 454 GVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRL 513
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL G S+I + G + F V D SHP+ EI++ LD + K+LK AGYV + S
Sbjct: 514 MMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMES 573
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EE L +HSE+LA+A+G+++T PGTT+R+ KNLR C++CH+ K++S + +
Sbjct: 574 VLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVD 633
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD RFHHF++G CSC D+W
Sbjct: 634 REIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 172/372 (46%), Gaps = 11/372 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y+ + + ++ M+ ++ N F + +K C G QIH + + G
Sbjct: 56 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 115
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + +L+ +Y+ F + A +FD++ R V+W +IS Y++N +AL +F
Sbjct: 116 FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFK 175
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD + + V+ A ++ L G+ IH +++ G + ++ SL MY+K
Sbjct: 176 EM--RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAK 233
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + +A F M + +++ W+AMISG A NG+G +AI+ F M + D T
Sbjct: 234 RGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSA 293
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ A + G ++ +SK + G ++D+ + G + A + + K
Sbjct: 294 VLASAQVGSLELARWLDGYISKSEYRDDTFVNTG-LIDMYAKCGSIYLARCVFDRVADK- 351
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVK 356
D +W ++ +H H G+ I E+K G ++ LL + G ++
Sbjct: 352 DVVLWSVMIMGYGLHGH---GQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGW 408
Query: 357 ELREFMNEKGLQ 368
EL M + G++
Sbjct: 409 ELFHLMPDHGIE 420
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q++ +++ G LM ++ F A K F E+ + D + WN +I Y +
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ ++ ++ + S P+ T L VL+AC G++IH ++G+GS + +
Sbjct: 65 IVDAPIRMY--MDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFV 122
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
NSL++MY+K G + A VF + ++ VVSW+++ISG NG +A+ F M++ V
Sbjct: 123 QNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNV 182
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD V++A ++ + +G ++K P+I + + + GL++ A
Sbjct: 183 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI--VISLTTMYAKRGLVEVA 240
Query: 290 YQLITSMGVKPDSTIWRTLL 309
M KP+ +W ++
Sbjct: 241 RFFFNRME-KPNLILWNAMI 259
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 295/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + P E +F++MRQ + + A + L G IH V + G
Sbjct: 172 IISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLG 231
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ +L +Y+ A F+ + + + + WN +IS Y N +A+ LF
Sbjct: 232 LEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFR 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + D +T + A A +G+LE + YIS+ Y + LI MY+K
Sbjct: 292 EMITKN--IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAK 349
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A VF + +KDVV WS MI G ++GHG++AI + M++AGV P+D TF G+
Sbjct: 350 CGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGL 409
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+AC + GLV EG M D GI P+ HY CVVDLLGRAG L+QAY I SM +KP
Sbjct: 410 LTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 468
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++W LL AC+IH+ V LGE E L L +G YV L NLY+S W +V +R
Sbjct: 469 GVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRL 528
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL G S+I + G + F V D SHP+ EI++ LD + K+LK AGYV + S
Sbjct: 529 MMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMES 588
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH+L EE L +HSE+LA+A+G+++T PGTT+R+ KNLR C++CH+ K++S + +
Sbjct: 589 VLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVD 648
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD RFHHF++G CSC D+W
Sbjct: 649 REIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 172/372 (46%), Gaps = 11/372 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y+ + + ++ M+ ++ N F + +K C G QIH + + G
Sbjct: 71 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + +L+ +Y+ F + A +FD++ R V+W +IS Y++N +AL +F
Sbjct: 131 FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFK 190
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD + + V+ A ++ L G+ IH +++ G + ++ SL MY+K
Sbjct: 191 EM--RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAK 248
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + +A F M + +++ W+AMISG A NG+G +AI+ F M + D T
Sbjct: 249 RGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSA 308
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ A + G ++ +SK + G ++D+ + G + A + + K
Sbjct: 309 VLASAQVGSLELARWLDGYISKSEYRDDTFVNTG-LIDMYAKCGSIYLARCVFDRVADK- 366
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVK 356
D +W ++ +H H G+ I E+K G ++ LL + G ++
Sbjct: 367 DVVLWSVMIMGYGLHGH---GQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGW 423
Query: 357 ELREFMNEKGLQ 368
EL M + G++
Sbjct: 424 ELFHLMPDHGIE 435
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q++ +++ G LM ++ F A K F E+ + D + WN +I Y +
Sbjct: 20 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ ++ ++ + S P+ T L VL+AC G++IH ++G+GS + +
Sbjct: 80 IVDAPIRMY--MDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFV 137
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
NSL++MY+K G + A VF + ++ VVSW+++ISG NG +A+ F M++ V
Sbjct: 138 QNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNV 197
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD V++A ++ + +G ++K P+I + + + GL++ A
Sbjct: 198 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI--VISLTTMYAKRGLVEVA 255
Query: 290 YQLITSMGVKPDSTIWRTLL 309
M KP+ +W ++
Sbjct: 256 RFFFNRME-KPNLILWNAMI 274
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 312/523 (59%), Gaps = 32/523 (6%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E L+ +M + I + + + +K C +L G ++H+R L+ G+ + + +M
Sbjct: 130 EAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIM 189
Query: 73 DLYSTFEKSFEACKLFDEIPQ------------------------------RDTVAWNVL 102
+LY + +A ++F+E+P+ +DTV W +
Sbjct: 190 ELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
I ++RN+ T AL F + E +P++ T + VL AC+ LGALE G +H Y+ +
Sbjct: 250 IDGFVRNEETNRALEAFRGMQGE--NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF 307
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
+ + N+LI MYS+CGS+ A VF M ++DV++++ MISGL+MNG R AIE F
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M + P + TF GVL+ACSH GLVD G M++D+ + P I HYGC+VDLLGR
Sbjct: 368 RVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGR 427
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
G L++AY LI +M + PD + TLL AC++HK++ LGE+V + L + +SG YVLL
Sbjct: 428 VGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLL 487
Query: 343 LNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQML 402
++Y+S G W++ ++R M E G+Q PGCS+I + +HEF++ D+ HP+ IY+ L
Sbjct: 488 SHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKL 547
Query: 403 DEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNL 462
+E+N+ L++ GY E L ++ EK AL+ HSE+LAI +G+++T P T IRV KNL
Sbjct: 548 EELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNL 607
Query: 463 RICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
R+C DCH+ K+++ + R++++RDR RFH+F G CSC DYW
Sbjct: 608 RVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 34/290 (11%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
L IHA+++R+G+ D ++ L+ S A ++F + + LI ++ +
Sbjct: 66 LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 125
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+A+ L+ + E PD+ +L+AC AL G ++H + G+ S
Sbjct: 126 GNYLEAIQLYSRMLHE--SILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRL 183
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPE------------------------------KDV 199
+ ++ +Y KCG LG A VF+ MPE KD
Sbjct: 184 VRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDT 243
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
V W+AMI G N A+E+F MQ V P++ T VLSACS G ++ G
Sbjct: 244 VCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 303
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
M K F I N+ ++++ R G +D+A + M + D + T++
Sbjct: 304 MRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-DVITYNTMI 351
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQI----HARV 56
M+ + + F M+ + + N F I C + CS +G L+I H+ +
Sbjct: 249 MIDGFVRNEETNRALEAFRGMQGENVRPN----EFTIVCVLSACSQLGALEIGRWVHSYM 304
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ +L+ + L+++YS EA +FDE+ RD + +N +IS N ++R A+
Sbjct: 305 RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAI 364
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLI 175
LF + +P +VT + VL AC+H G ++FG E H ++ ++ ++
Sbjct: 365 ELFRVMVGRR--LRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMV 422
Query: 176 AMYSKCGSLGMAFEVFKGM 194
+ + G L A+++ + M
Sbjct: 423 DLLGRVGRLEEAYDLIRTM 441
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D + +LQ H+ + IH + +G+ + L+ SKC ++ A +F
Sbjct: 48 DQKQIISLLQRSRHINQVL---PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 104
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ +V ++A+I G +G+ +AI+ + M + PD+ +L AC +
Sbjct: 105 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 164
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
EG R K G N +++L G+ G L A ++ M P+ + T++
Sbjct: 165 EGREVHSRALK-LGFSSNRLVRLRIMELYGKCGELGDARRVFEEM---PEDVVASTVM 218
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
+IS L + H + + R G D +L +CS C +D + R+ + +
Sbjct: 52 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAID----YASRIFQ-Y 106
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLG 321
PN++ Y ++D +G +A QL + M + PD+ + ++L AC + G
Sbjct: 107 THNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREG 166
Query: 322 ERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
V H LK S + ++ ++ LY G+ + + E M E + +T S+
Sbjct: 167 REV--HSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSD 224
Query: 379 KGVVHE 384
+G+V E
Sbjct: 225 QGLVEE 230
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/509 (38%), Positives = 298/509 (58%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R S + EE L+ +M ++ I + F F +K C +L G+QIHA V + G
Sbjct: 101 MIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAG 160
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++Y A +F+++ ++ +W+ +I + + + L L
Sbjct: 161 LEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLG 220
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLCNSLIA 176
+++ E + ++ + L AC HLG+ FG IH R ISE K SLI
Sbjct: 221 DMSGEGRH-RAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVK----TSLID 275
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY K GSL VF+ M +K+ S++ +I+GLA++G GR+A+ F M G+ PDD
Sbjct: 276 MYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVV 335
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ GVLSACSH GLV+EG+ +R+ + I P I HYGC+VDL+GRAG+L AY LI SM
Sbjct: 336 YVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSM 395
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+KP+ +WR+LL AC++H ++ +GE E++ +L GDY++L N+Y+ W V
Sbjct: 396 PIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVA 455
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R M EK L TPG S + V++FV D S P+ IY M+ ++ QLK GY
Sbjct: 456 RIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTP 515
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+++ L ++ +EK L +HS+KLAIAF ++ T G+ IR+++N+R+C DCH + K +S
Sbjct: 516 DMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKFIS 575
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE+ +RDR RFHHF++G CSC DYW
Sbjct: 576 VIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM--YSKCGSLGMAFEV 190
+V L +L+ C ++E +++H +I + G ++L+A S+ GS+ A +
Sbjct: 30 NVQGLSLLKRCK---SMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSI 86
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F+ + E ++ MI G + + +A+ + M G+ PD+ T+ VL ACS G +
Sbjct: 87 FRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGAL 146
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
EG+ + K G+ ++ ++++ G+ G ++ A + M K ++ W +++G
Sbjct: 147 KEGVQIHAHVFKA-GLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVAS-WSSIIG 204
Query: 311 A 311
A
Sbjct: 205 A 205
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/473 (40%), Positives = 290/473 (61%), Gaps = 7/473 (1%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQR 94
AI C C GG +H ++R G+ + D ++D+Y+ K A ++FD +P R
Sbjct: 280 AIAQCGDIC---GGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR 336
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D V+WN LI+ Y++N +A+ ++D++ + E G KP T + VL A +HLGAL+ G +
Sbjct: 337 DAVSWNTLITGYMQNGLASEAIHVYDHMQKHE-GLKPIQGTFVSVLPAYSHLGALQQGTR 395
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H + G + + +I +Y+KCG L A +F+ P + W+A+ISG+ ++GH
Sbjct: 396 MHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGH 455
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
G A+ F MQ+ G+ PD TF +L+ACSH GLVD+G F + M +GI P HY
Sbjct: 456 GAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYA 515
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
C+VD+ GRAG LD A+ I +M +KPDS IW LLGACRIH +V +G+ ++L EL +
Sbjct: 516 CMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPK 575
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS--H 392
G YVL+ N+Y+ VG W+ V E+R + + LQ TPG S+I +K V+ F + H
Sbjct: 576 NVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIH 635
Query: 393 PRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPP 452
P+ EI + L ++ +++ GYV + + L ++ +EK L+ HSE+LAIAFG++ TPP
Sbjct: 636 PQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPP 695
Query: 453 GTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T + + KNLR+C DCHN K +S + RE+I+RD RFHHF++G CSC D+W
Sbjct: 696 RTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 157/324 (48%), Gaps = 12/324 (3%)
Query: 51 QIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+HA LR G + D+ L+ Y F + +A + FDE+ RD AWN ++S RN
Sbjct: 89 QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
R +A+ LF + E G D VT VL C LG +H Y +HG ++
Sbjct: 149 ARAAEAVGLFGRMVME--GVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELF 206
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+CN++I +Y K G L +VF GM +D+V+W+++ISG G A+E F M+ +G
Sbjct: 207 VCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSG 266
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
V PD T + SA + CG + G ++ R D G +I +VD+ + +
Sbjct: 267 VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG---DIIAGNAIVDMYAKLSKI 323
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE--SGDYVLLLN 344
+ A ++ SM V+ D+ W TL+ + + V +H+ + + + G +V +L
Sbjct: 324 EAAQRMFDSMPVR-DAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLP 382
Query: 345 LYSSVGDWEKVKELREFMNEKGLQ 368
YS +G ++ + + GL
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLN 406
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 176/382 (46%), Gaps = 16/382 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ E LF +M + + + S + C+ L +H ++ G
Sbjct: 141 MLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHG 200
Query: 61 YQLDSQLMT--TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
LD +L ++D+Y E K+FD + RD V WN +IS + + + A+ +
Sbjct: 201 --LDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEM 258
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAM 177
F + +SG PD +T L + A A G + G +H Y+ G+ + N+++ M
Sbjct: 259 FCGM--RDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDM 316
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQT 236
Y+K + A +F MP +D VSW+ +I+G NG +AI + MQ+ G+ P T
Sbjct: 317 YAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGT 376
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL A SH G + +G + +S G+ +++ CV+DL + G LD+A L+
Sbjct: 377 FVSVLPAYSHLGALQQGTR-MHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEA-MLLFEQ 434
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKV 355
+ + W ++ +H H G + + +++ + S D+V ++L ++ V
Sbjct: 435 TPRRSTGPWNAVISGVGVHGH---GAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLV 491
Query: 356 KELREFMNEKGLQTTPGCSTIG 377
+ R F N +QT G I
Sbjct: 492 DQGRNFFNM--MQTAYGIKPIA 511
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 302/507 (59%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCM--KFCSLMGGLQIHARVLR 58
M+ Y + S +E LF+ M+ P + ++ + M + L G ++H + +
Sbjct: 447 MINVYIQNGSFDEAMKLFKMMKTD---VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK 503
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ + + TL+D+Y+ + ++ K+F+ + RD + WN +I+ + ++ L +
Sbjct: 504 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 563
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ E G PD T L +L C+ L A G++IH I + G S + + N LI MY
Sbjct: 564 ISRMRTE--GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 621
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCGSL +F+VFK M KDVV+W+A+IS M G G+ A+ +FG M+ AG+ PD F
Sbjct: 622 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 681
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
++ ACSH GLV+EG+ + RM KD+ I P I HY CVVDLL R+ LLD+A I SM +
Sbjct: 682 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 741
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KPDS+IW LL ACR+ + +RV E +IEL ++G YVL+ N+Y+++G W++V+ +
Sbjct: 742 KPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSI 801
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ + +GL+ PGCS + ++ V+ F + E+ ++L + + GY+A +
Sbjct: 802 RKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANL 861
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ +EK + L HSE+LAIAFG+L T PGT ++V KNLR+C DCH K +S +
Sbjct: 862 QFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKI 921
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC DYW
Sbjct: 922 XQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E ++ + R + + + S ++ C S+ G IH + + G
Sbjct: 246 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 305
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ +Y F + ++FD++ RD V+WN +I Y + +++ LF
Sbjct: 306 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM 365
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD +T +LQAC HLG LEFG+ +H Y+ GY N LI MY+K
Sbjct: 366 EMVNQ---FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 422
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L + EVF GM KD VSW++MI+ NG +A++ F M + V PD T+ +
Sbjct: 423 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVML 481
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS + G + G ++K G NI +VD+ + G + + ++ +M +
Sbjct: 482 LSMSTQLGDLXLGKELHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR- 539
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHL 328
D W T++ +C + LG R+I +
Sbjct: 540 DIITWNTIIASCVHSEDCNLGLRMISRM 567
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 13/362 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA + + E L+ + ++ R+ + + I C IH RVL G
Sbjct: 145 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMG 204
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL-- 118
+ D + L+D+Y F +A K+F+E+P RD V+WN LIS Y N +AL +
Sbjct: 205 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 264
Query: 119 -FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
F NL G PD T VL+AC LG++E G+ IH I + G + + N L++M
Sbjct: 265 RFRNL-----GVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 319
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQT 236
Y K L +F M +D VSW+ MI G + G ++I+ F M+ F PD T
Sbjct: 320 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF--MEMVNQFKPDLLT 377
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
T +L AC H G ++ G D M G + ++++ + G L + ++ + M
Sbjct: 378 ITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGM 436
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
K DS W +++ + ++ + + +S YV+LL++ + +GD K
Sbjct: 437 KCK-DSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGK 495
Query: 357 EL 358
EL
Sbjct: 496 EL 497
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 152/330 (46%), Gaps = 11/330 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD-EIPQRDTVAWNVLISCYIRN 109
++H+ ++ G L+ Y+ F + +F P + WN +I N
Sbjct: 93 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+AL L+ R +PD T V+ ACA L E + IH + G+GS +
Sbjct: 153 GLFSEALSLYSETQRIR--LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLY 210
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N+LI MY + L A +VF+ MP +DVVSW+++ISG NG+ +A+E + + G
Sbjct: 211 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 270
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V PD T + VL AC G V+EG + + K GI ++ ++ + + L
Sbjct: 271 VVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK-IGIKKDVIVNNGLLSMYCKFNGLIDG 329
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS- 348
++ M ++ D+ W T++ + V L E I+ +E+ Q D + + ++ +
Sbjct: 330 RRIFDKMVLR-DAVSWNTMICG---YSQVGLYEESIKLFMEMVNQFKPDLLTITSILQAC 385
Query: 349 --VGDWEKVKELREFMNEKGLQTTPGCSTI 376
+GD E K + ++M G + S I
Sbjct: 386 GHLGDLEFGKYVHDYMITSGYECDTTASNI 415
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 296/525 (56%), Gaps = 21/525 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
MV Y+ + EE LF +M + +P+ + + C + + G +H VL+
Sbjct: 346 MVCGYAQAGMDEEALELFARMEAEAGVVPSET-TIAGVLPACARSETFAGKEAVHGYVLK 404
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + LMDLY+ A +F I RD V+WN LI+ + DA L
Sbjct: 405 RGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQL 464
Query: 119 FDNLNRE----------------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
+ ++ E P++VT + +L CA L A G++IH Y H
Sbjct: 465 VREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRH 524
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
S + + ++L+ MY+KCG L ++ VF +P+++V++W+ +I M+G G +AI F
Sbjct: 525 ALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALF 584
Query: 223 GAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
M + P++ TF L+ACSH G+VD GM M ++ G+ P + C VD+LG
Sbjct: 585 DRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILG 644
Query: 282 RAGLLDQAYQLITSMGV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV 340
RAG LD+AY +ITSM + + W + LGACR+H++V LGE E L +L+ E+ YV
Sbjct: 645 RAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYV 704
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQ 400
LL N+YS+ G WEK E+R M ++G+ PGCS I L GV+H F+ + +HP ++
Sbjct: 705 LLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHA 764
Query: 401 MLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAK 460
+D + ++++ GY + +S LH++ EK L YHSEKLAIAFG+L TPPG TIRVAK
Sbjct: 765 HMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAK 824
Query: 461 NLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
NLR+C DCH AK +S + RE+++RD RFHHF +G CSC DYW
Sbjct: 825 NLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 147/319 (46%), Gaps = 25/319 (7%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMG-----GLQIHARVLRDGYQLDSQ---LMT 69
+ +R + +P + SF + + CS + G + HA L++G+ LD
Sbjct: 147 LDALRDMLLEGHPLS-SFTLVSVLLACSHLAEDLRLGREAHAFALKNGF-LDGDERFAFN 204
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDT-----VAWNVLISCYIRNQRTRDAL-CLFDNLN 123
L+ +Y+ +A LF + D+ V WN ++S +++ R +A+ ++D +
Sbjct: 205 ALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVA 264
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCG 182
R G +PD +T L AC+ L L G ++H Y+ + + + ++L+ MY+
Sbjct: 265 R---GVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHE 321
Query: 183 SLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTG 239
+G+A VF +P + + W+AM+ G A G +A+E F M+ AGV P + T G
Sbjct: 322 RVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAG 381
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL AC+ G + G+ N ++DL R G ++ A + ++ +
Sbjct: 382 VLPACARSETF-AGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPR 440
Query: 300 PDSTIWRTLLGACRIHKHV 318
D W TL+ C + H+
Sbjct: 441 -DVVSWNTLITGCVVQGHI 458
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 183/459 (39%), Gaps = 80/459 (17%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG--YQLDSQLMTTLMDLYSTFEKSFEA 84
P + FA A K SL+ IH LR + + L+ Y+ A
Sbjct: 56 PLDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAA 115
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
LF+ +P RD V +N LI+ +R AL ++ E G T + VL AC+
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLE--GHPLSSFTLVSVLLACS 173
Query: 145 HLGA-LEFGEKIHRYISEHGY--GSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-----PE 196
HL L G + H + ++G+ G + N+L++MY++ G + A +F + P
Sbjct: 174 HLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPG 233
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
VV+W+ M+S L +G +AIE M GV PD TF L ACS ++ G
Sbjct: 234 GGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREM 293
Query: 257 LDRMSKD-----------------------------FGILPNIHH----YGCVVDLLGRA 283
+ KD F ++P H + +V +A
Sbjct: 294 HAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQA 353
Query: 284 GLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
G+ ++A +L M GV P T +L AC G+ + + + +
Sbjct: 354 GMDEEALELFARMEAEAGVVPSETTIAGVLPAC-ARSETFAGKEAVHGYVLKRGMADNPF 412
Query: 340 V--LLLNLYSSVGDWEKVK------ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
V L++LY+ +GD E + E R+ ++ L T GC G
Sbjct: 413 VQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT--GCVVQG-------------- 456
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
I++ +Q++ E+ +Q G + T+E G +E+
Sbjct: 457 --HIHDAFQLVREMQQQ----GRFTDATTEDGIAGTDEE 489
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/500 (40%), Positives = 296/500 (59%), Gaps = 7/500 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCS---LMGGL--QIHARVLRDGYQLDSQ 66
EE M + R+P + ++ + +K C+ + L +IHA +R GY L +
Sbjct: 162 EEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTH 221
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ TTL+D Y+ A +F +P+R+ V+W +I CY +N+R DA+ LF + +
Sbjct: 222 VATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASD 281
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
P+ VT + +L A A + AL G+ +H YI G+ S +++ N+L+AMY KCG L
Sbjct: 282 EDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEA 341
Query: 187 AFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+F + KDVVSW+ +ISG M+G G +A++ F M + GV P+ TF VL ACS
Sbjct: 342 GRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACS 401
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLVDEG + M D+ + P HY C+VDLLGRAG LD+A +LI M ++P +W
Sbjct: 402 HAGLVDEGKRLFESMV-DYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVW 460
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+LLGACRIH+HV E L +L+ + +G+YVLL ++Y+ +V L++ + E
Sbjct: 461 GSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEH 520
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
L+ PGCS I +K +H FV D +P+I E+ ++ E Q+K GYV + + L+++
Sbjct: 521 ALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDI 580
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
EEK L HSEKLA+AFG++ T G IR+ KNLR+C DCH+ K +S RE+I+
Sbjct: 581 EEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIV 640
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RD RFHHFR+G CSC DYW
Sbjct: 641 RDVNRFHHFRDGICSCGDYW 660
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 155 IHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+HR + ++ + S L LI Y+ G L A +VF P K + W+A++ LA+
Sbjct: 100 VHRRLKADPVFRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALAD 159
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-----SHC---GLVDEGMMFLDRMSKDFG 265
HG +A+ M R V D ++ L AC SH LV E + + + +G
Sbjct: 160 HGEEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVRE--IHAHAVRRGYG 217
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLG 310
+ + H ++D + G++ A + +M P+ + W ++G
Sbjct: 218 L--HTHVATTLIDCYAKLGIVSYAESVFATM---PERNVVSWTAMIG 259
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/534 (38%), Positives = 308/534 (57%), Gaps = 29/534 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ + S + LF +M +K + + +A + +K C+ +L G ++H VL+ G
Sbjct: 96 LIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSG 155
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI-SCY-----------IR 108
LD + L++LY +A K+FD +P+RD VA V+I SC+
Sbjct: 156 LGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFN 215
Query: 109 NQRTRDALC---LFDNLNR--------------EESGCKPDDVTCLLVLQACAHLGALEF 151
TRD +C + D L R + G +P++VT + VL ACA LGALE
Sbjct: 216 EMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALEL 275
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G IH Y+ + G + +LI MYS+CG + A +F G+ KDV ++++MI GLA+
Sbjct: 276 GRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLAL 335
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
+G +A+E F M + V P+ TF GVL+ACSH GLVD G + M GI P +
Sbjct: 336 HGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVE 395
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HYGC+VD+LGR G L++A+ I MGV+ D + +LL AC+IHK++ +GE+V + L E
Sbjct: 396 HYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEH 455
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+SG +++L N Y+S+G W E+RE M + G+ PGCS+I + +HEF D+
Sbjct: 456 YRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLR 515
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
HP IY+ L+E+N K GY+ LH++ E+K AL+ HSE+LAI +G+++T
Sbjct: 516 HPERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTE 575
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
TT+RV KNLRIC DCH K+++ + R++++RDR RFHHF G CSC DYW
Sbjct: 576 AYTTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 36/332 (10%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
IH ++ D + L+ +Y A KLF + + LI ++
Sbjct: 45 SIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFG 104
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
DA+ LF + R+ D+ +L+AC AL G+++H + + G G ++
Sbjct: 105 SYTDAINLFCQMVRKH--VLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSI 162
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS----------------------------- 201
L+ +Y KCG L A ++F GMPE+DVV+
Sbjct: 163 ALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDT 222
Query: 202 --WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
W+ +I GL NG +E F MQ GV P++ TF VLSAC+ G ++ G
Sbjct: 223 VCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAY 282
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
M K G+ N G ++++ R G +D+A L + VK D + + +++G +H
Sbjct: 283 MRK-CGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVK-DVSTYNSMIGGLALHGKSI 340
Query: 320 LGERVIEHLIELKAQESG-DYVLLLNLYSSVG 350
+ +++ + + +G +V +LN S G
Sbjct: 341 EAVELFSEMLKERVRPNGITFVGVLNACSHGG 372
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+ +Y K + A ++F+ +V ++++I G G DAI F M R V D
Sbjct: 65 LLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLAD 124
Query: 234 DQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
+ T +L AC G G++ + D I + V+L G+ G+L+
Sbjct: 125 NYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKL------VELYGKCGVLED 178
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A ++ M + D ++G+C + E IE E+ +++ + ++++
Sbjct: 179 ARKMFDGMPER-DVVACTVMIGSCF---DCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVR 234
Query: 349 VGDWEKVKELREFMNEKGLQ 368
G++ + E+ M KG++
Sbjct: 235 NGEFNRGLEVFREMQVKGVE 254
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 292/538 (54%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E+ LF KMR + + + I C + G Q+HA +L++
Sbjct: 260 MISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNE 319
Query: 61 YQLDSQLM----TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
D + TL+ LY + K A K+F E+P +D + WN L+S Y+ R +A
Sbjct: 320 LNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAK 379
Query: 117 CLFDNLNREE-----------------------------SGCKPDDVTCLLVLQACAHLG 147
F + + G +P+D + AC+ LG
Sbjct: 380 SFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLG 439
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
ALE G ++H I G+ S +++ N++I MY++CG + A +F MP D VSW++MI+
Sbjct: 440 ALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIA 499
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +GHG AIE + M + G+ PD +TF VLSACSH GLV+EG + + M +++GI
Sbjct: 500 ALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIA 559
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P HY ++DL RAG A +I SM + + IW LL CR H ++ LG E
Sbjct: 560 PGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEK 619
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L +L Q G YVLL N+Y+S+G W V R+ M ++G++ P CS ++ VH F+V
Sbjct: 620 LFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLV 679
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
DD HP + IY L+++N ++K GY+ + LH++ +E K ALS HSEKLA+AFG+
Sbjct: 680 DDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGL 739
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ P G T+RV KNLRIC DCHN K +S V RE+++RD RFHHF+ G CSC +YW
Sbjct: 740 MKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 140/364 (38%), Gaps = 84/364 (23%)
Query: 25 RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
R+ N + + C S +H V+ G++L ++ L+D+Y A
Sbjct: 8 RVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYA 67
Query: 85 CKLFDEIPQ---------------------------------RDTVAWNVLISCYIRNQR 111
KLFDEIPQ RDTV +N +I+ Y
Sbjct: 68 RKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMND 127
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNL 170
A+ LF + + +PDD T VL A + E ++H + + G +
Sbjct: 128 GHSAIELFRAM--RWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAV 185
Query: 171 CNSLIAMYSKC----------------------------------------GSLGMAFEV 190
N+L+++Y KC G L A E+
Sbjct: 186 LNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREI 245
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
M E+ ++W+AMISG +G DA+ F M+ GV D+ T+T V+SAC+ G
Sbjct: 246 LDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFF 305
Query: 251 DEG-----MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
G + + ++ D L ++ + ++ L + G +D A ++ M VK D W
Sbjct: 306 LLGKQVHAYILKNELNPDRDFLLSVGN--TLITLYWKYGKVDGARKIFYEMPVK-DIITW 362
Query: 306 RTLL 309
TLL
Sbjct: 363 NTLL 366
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/540 (37%), Positives = 309/540 (57%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR-VLRD 59
M+R Y++ E + +MR+ + F S K C ++ G Q+HA+ +L
Sbjct: 113 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 172
Query: 60 GYQLDSQLMTTLMDLY----------STFEKSFE---------------------ACKLF 88
G+ D + +++DLY F++ E A LF
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++P +D VAW +++ Y +N R ++AL F + ++ G + D+VT V+ ACA LGA
Sbjct: 233 DDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM--QDVGMETDEVTLAGVISACAQLGA 290
Query: 149 LEFGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
++ I G+G N+ ++LI MYSKCGS A++VF+ M E++V S+S+MI
Sbjct: 291 VKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G AM+G A++ F M + + P+ TF G+LSACSH GLV++G +M K FG+
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P+ HY C+VDLLGRAG L++A L+ +M ++P+ +W LLGACRIH + + +
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN 470
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI-GLKGVVHEF 385
L +L+ G+Y+LL N+Y+S G WE+V +LR+ + EKG + PGCS G G +H+F
Sbjct: 471 ELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDF 530
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
D +HPR +EI Q L ++ ++L+ GY + S ++L +EK L HSEKLA+A+
Sbjct: 531 FAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAY 590
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L T G TI++ KN+RIC DCHN S + RE+I+RD +RFHHF G CSC ++W
Sbjct: 591 GLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 38/289 (13%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL--FDEIPQRDTVAWN 100
C+L + Q+HA ++R+G S ++T L+ + + + + L F ++ + W
Sbjct: 52 CTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWT 111
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-RYI 159
+I Y ++ + + R+ G P T + +AC ++ G+++H + I
Sbjct: 112 AMIRGYALQGLLSESTNFYTRMRRD--GVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS------------------ 201
G+ S + + NS+I +Y KCG LG A +VF M E+DVVS
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 202 -------------WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
W+AM++G A NG ++A+E F MQ G+ D+ T GV+SAC+ G
Sbjct: 230 GLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 249 LVDEGMMFLDRMSKD-FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
V D + FG N+ ++D+ + G D+AY++ M
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/511 (39%), Positives = 298/511 (58%), Gaps = 13/511 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y S EE + +M Q+ + F +K C + S+ G QIH +V + G
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF- 119
+ D + +L+++Y + + +F+++ + +W+ ++S + L LF
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 120 -----DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
NL EESG V+ LL ACA+ GAL G IH ++ + + + SL
Sbjct: 223 GMCSETNLKAEESGM----VSALL---ACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ MY KCG L A +F+ M +++ +++SAMISGLA++G G A+ F M + G+ PD
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+ VL+ACSH GLV EG M K+ + P HYGC+VDLLGRAGLL++A + I
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
S+ ++ + IWRT L CR+ +++ LG+ + L++L + GDY+L+ NLYS W+
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDD 455
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V R + KGL+ TPG S + LKG H FV D SHP+ EIY+ML ++ QLK GY
Sbjct: 456 VARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
++T L N+ EEK L HS+K+AIAFG+L TPPG+ I++A+NLR+C DCH + K
Sbjct: 516 SPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKK 575
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S +Y RE+++RDR RFH F+ G CSC DYW
Sbjct: 576 ISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG---SLGMAFEVFK 192
CL +L+ C ++ EF + R+I + S +S++A + G S+ A +F+
Sbjct: 33 CLYLLKRCHNID--EFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
G+ + ++ MI G +A+ + M + G PD+ T+ +L AC+ + E
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G ++ K G+ ++ ++++ GR G ++ + + + K ++ W +++ A
Sbjct: 151 GKQIHGQVFK-LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS-WSSMVSA 207
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 303/505 (60%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LF++M+ + I ++ + AI C +L G QIHA+ G
Sbjct: 545 MIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + L+ LY+ K +A FD+I +D ++WN LIS + ++ +AL LF
Sbjct: 605 YSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFS 664
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+++ +G + + T + A A++ ++ G++IH I + G+ S+ + N LI +Y+K
Sbjct: 665 QMSK--AGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAK 722
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A F MPEK+ +SW+AM++G + +GHG A+ F M++ GV P+ TF GV
Sbjct: 723 CGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGV 782
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG+ + M + G++P HY CVVDLLGR+GLL +A + + M ++P
Sbjct: 783 LSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQP 842
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ + RTLL AC +HK++ +GE HL+EL+ ++S YVLL N+Y+ G W R+
Sbjct: 843 DAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQ 902
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I + VH F D HP +++IY+ L ++N+ GY+ + S
Sbjct: 903 MMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNS 962
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L++ +KG HSEKLAIAFG+L+ T I V KNLR+C DCHN+ K +S + +
Sbjct: 963 LLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISD 1022
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF+ G CSC DYW
Sbjct: 1023 RVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 177/397 (44%), Gaps = 46/397 (11%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
AYS G M ++ + N + + C+ G ++H ++L+ G+
Sbjct: 42 AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
+ L LMDLY F A +FDE+P R WN ++ ++ + L LF +
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFG--EKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+E+ KPD+ T VL+ C G + F EKIH HGY + + +CN LI +Y K
Sbjct: 162 QEK--VKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKN 218
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF G+ ++D VSW AM+SGL+ +G +A+ F M +GV+P F+ VL
Sbjct: 219 GFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVL 278
Query: 242 SACS-----------HCGLVDEGM--------MFLDRMSKDFGILPNIH----------- 271
SAC+ H ++ +G + S+ +P
Sbjct: 279 SACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEV 338
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
Y ++ L + G D+A +L M +KPD +LL AC + +G++ H
Sbjct: 339 SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQF--HS 396
Query: 329 IELKAQESGDYVL---LLNLYSSVGDWEKVKELREFM 362
+KA S D +L LL+LY D +K EF
Sbjct: 397 YAIKAGMSSDIILEGALLDLYVKCSD---IKTAHEFF 430
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 4/316 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ S S EE LF +M + P+ S + C K G Q+H VL+ G
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L++ + L+ LYS A ++F+ + QRD V++N LIS + + AL LF
Sbjct: 302 FSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFK 361
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD VT +L AC+ +GAL G++ H Y + G S + L +L+ +Y K
Sbjct: 362 KMCLD--CLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVK 419
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + A E F ++VV W+ M+ + + ++ + F MQ G+ P+ T+ +
Sbjct: 420 CSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSI 479
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L CS VD G ++ K G N++ ++D+ + G LD A ++ + K
Sbjct: 480 LRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEK- 537
Query: 301 DSTIWRTLLGACRIHK 316
D W ++ H+
Sbjct: 538 DVVSWTAMIAGYAQHE 553
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 144/309 (46%), Gaps = 4/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ S ++ LF+KM + + + + C +L+ G Q H+ ++ G
Sbjct: 343 LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG 402
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D L L+DLY A + F + V WNV++ Y ++ +F
Sbjct: 403 MSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFT 462
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G +P+ T +L+ C+ L A++ GE+IH + + G+ + + + LI MY+K
Sbjct: 463 QMQME--GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 520
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A ++F+ + EKDVVSW+AMI+G A + +A+ F MQ G+ D+ F
Sbjct: 521 LGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASA 580
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC+ +++G + G ++ +V L R G + AY + K
Sbjct: 581 ISACAGIQALNQGQQIHAQACVS-GYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSK- 638
Query: 301 DSTIWRTLL 309
D+ W +L+
Sbjct: 639 DNISWNSLI 647
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 190/395 (48%), Gaps = 59/395 (14%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGG--------LQIHARVLRDGYQLDSQLM 68
LF +M Q+++ + + ++ C GG +IHAR + GY+ +
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGC-------GGGDVPFHCVEKIHARTITHGYENSLFVC 208
Query: 69 TTLMDLYSTFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L+DLY F+ F A K+FD + +RD+V+W ++S ++ +A+ LF ++
Sbjct: 209 NPLIDLY--FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH--T 264
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
SG P VL AC + + GE++H + + G+ + +CN+L+ +YS+ G+
Sbjct: 265 SGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A +VF M ++D VS++++ISGL+ G+ A+E F M + PD T +LSACS
Sbjct: 325 AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL--------------------------- 279
G + G F K G+ +I G ++DL
Sbjct: 385 VGALLVGKQFHSYAIKA-GMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNV 443
Query: 280 -LGRAGLLD---QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
L GLLD +++++ T M G++P+ + ++L C + V LGE++ +++
Sbjct: 444 MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG 503
Query: 333 AQESGDYV--LLLNLYSSVGDWEKVKELREFMNEK 365
Q + YV +L+++Y+ +G + ++ + EK
Sbjct: 504 FQFN-VYVSSVLIDMYAKLGKLDHALKIFRRLKEK 537
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 297/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF +M ++ + + A++ C + L G+++H ++R G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +M L+ +YS ++ A +FDE+ +R V+WN +I +N + DA+ LF
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E KPD T + V+ A A + IH Y + + +LI MY+K
Sbjct: 353 RMQLE--NVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 410
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A +F E+ V++W+AMI G +G G+ A+E F M+ G+ P++ TF V
Sbjct: 411 CGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSV 470
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG + M +D+G+ P + HYG +VDLLGRAG LD+A+ I M + P
Sbjct: 471 LSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDP 530
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++ +LGAC++HK+V L E + + EL QE +VLL N+Y++ W+ V +R
Sbjct: 531 GLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRT 590
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + GLQ TPG S I LK +H F +H + EIY L ++ +++K GYV + T
Sbjct: 591 AMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPD-TD 649
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H++ + K L+ HSEKLAIAFG++ T PGTTI++ KNLR+C DCHN K++S V
Sbjct: 650 SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTG 709
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G+CSC DYW
Sbjct: 710 REIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 137/276 (49%), Gaps = 3/276 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C L G +HA++ G ++ T L ++Y+ + +A ++FD +P RD
Sbjct: 66 LKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDR 125
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
VAWN L++ Y RN R A+ + + +EE G +PD +T + VL ACA+ AL + H
Sbjct: 126 VAWNALVAGYARNGLARMAMEMVVRM-QEEEGERPDSITLVSVLPACANARALAACREAH 184
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G +N+ +++ Y KCG + A VF MP K+ VSW+AMI G A NG R
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+A+ F M GV D + L AC G +DEGM + + + G+ N+ +
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVR-IGLDSNVSVMNAL 303
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ + + +D A + + + + W ++ C
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGC 338
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+G P T +L+ CA G L G +H ++ G S+ +L MY+KC
Sbjct: 53 AGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPAD 112
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVL 241
A VF MP +D V+W+A+++G A NG R A+E MQ G PD T VL
Sbjct: 113 ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 297/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + S + L++ M + P + ++ C + L G ++H +++
Sbjct: 282 MIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS 341
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G LD+ + +L+ +Y+ A DE+ +DTV+++ +IS ++N AL +F
Sbjct: 342 GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIF 401
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + SG P T + +L AC+HL AL+ G H Y G+ + ++CN++I MYS
Sbjct: 402 RQM--QSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYS 459
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + ++ E+F M +D++SW+ MI G ++G +A+ F +Q G+ PDD T
Sbjct: 460 KCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIA 519
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH GLV EG + MS++F I P + HY C+VDLL RAG LD+AY I M
Sbjct: 520 VLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFV 579
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P+ IW LL ACR HK++ +GE+V + + L + +G++VL+ N+YSSVG W+ +R
Sbjct: 580 PNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIR 639
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
G + +PGCS + + GV+H F+ SHP+ I + L E+ Q+K GY A+ +
Sbjct: 640 SIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSS 699
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ EEK L YHSEK+AIAFG+L T P + I V KNLRICVDCH+ K ++ +
Sbjct: 700 FVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLT 759
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHF++G C+C D+W
Sbjct: 760 EREITVRDASRFHHFKDGICNCQDFW 785
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 29/326 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ S ++ YL+ M Q + F F +K C +L G IH G
Sbjct: 78 MIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILG 137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDALCL 118
+D + T L+ +Y+ ++A LF+ I RD VAWN +I+ + + A +
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAF--SFHALHAQTI 195
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+++G P+ T + +L AL G+ IH Y + + + L +L+ MY
Sbjct: 196 HSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMY 255
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTF 237
+KC L A ++F + +K+ V WSAMI G ++ DA+ + M G+ P T
Sbjct: 256 AKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATL 315
Query: 238 TGVLSACS-----------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+L AC+ HC ++ GM + G ++ + + G++
Sbjct: 316 ATMLRACAQLTDLKRGKKLHCHMIKSGM----DLDTTVG--------NSLISMYAKCGIM 363
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGAC 312
D A + M + D+ + ++ C
Sbjct: 364 DNAVGFLDEM-IAKDTVSYSAIISGC 388
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 148/322 (45%), Gaps = 11/322 (3%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
DS T + Y + + +FD+IP+ V WN++I Y + + ++ L+ L
Sbjct: 39 DSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLY--L 96
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
+ + G P + T +L+AC+ L AL+ G IH + G + + +L+ MY+KCG
Sbjct: 97 HMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCG 156
Query: 183 SLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A +F + ++D+V+W+AMI+ + + I S MQ+AGV P+ T +
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L + +G ++F N+ ++D+ + LL A ++ ++ K
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNF-FFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--LLNLYSSVGDWEKVKEL 358
D W ++G +H ++ + + ++ + L +L + + D ++ K+L
Sbjct: 276 D-VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKL 334
Query: 359 REFMNEKG--LQTTPGCSTIGL 378
M + G L TT G S I +
Sbjct: 335 HCHMIKSGMDLDTTVGNSLISM 356
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ + + S + F LF+ M Q +P + + A++ C L G Q+HA + +
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D +L+ +Y+ +A LFDE+ +DTV+++ L+S Y++N R +A +F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +PD T + ++ AC+HL AL+ G H + G S+ ++CN+LI MY+
Sbjct: 430 KKM--QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + ++ +VF MP +D+VSW+ MI+G ++G G++A F M G PD TF
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLV EG + M +G+ P + HY C+VDLL R G LD+AY+ I SM ++
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +W LLGACR++K++ LG++V + EL + +G++VLL N+YS+ G +++ E+R
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVR 667
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+G + +PGCS I + G +H FV D SHP+ EIY+ LD I +K GY + +
Sbjct: 668 IIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 727
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L +L EEK AL HSEKLAIA+G+L+ TI V KNLR+C DCH K +S V
Sbjct: 728 FVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVK 787
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+ G+CSC D+W
Sbjct: 788 RRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 17/323 (5%)
Query: 1 MVRAYSMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
++RAYS SSSP +G +L+ +M + R+ N + FA+K C G IH +
Sbjct: 94 LIRAYS-SSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAI 152
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G Q D + T L+D+Y +A +F +P RD VAWN +++ Y + A+
Sbjct: 153 HAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVA 212
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI------SEHGYGSKMN-- 169
++ + +P+ T + +L A GAL G +H Y SK+
Sbjct: 213 HLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDG 272
Query: 170 --LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
L +L+ MY+KCGSL A VF MP ++ V+WSA+I G + A F AM
Sbjct: 273 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA 332
Query: 228 AGV-FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
G+ F + L AC+ + G ++K G+ ++ ++ + +AGL+
Sbjct: 333 QGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLI 391
Query: 287 DQAYQLITSMGVKPDSTIWRTLL 309
DQA L M VK D+ + L+
Sbjct: 392 DQAIALFDEMAVK-DTVSYSALV 413
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 24/245 (9%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTR--DALCLFDNLNREESGCKPDDVTCLLVL 140
A LFD+IP D +N LI Y + T D L L+ + R P++ T L
Sbjct: 75 RAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHR--VAPNNYTFPFAL 132
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+AC+ L G IHR+ G + + + +L+ MY KC L A +F MP +D+V
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVLSACSHCGLVDEGM---- 254
+W+AM++G A +G A+ +MQ + P+ T +L + G + +G
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 255 ------MFLDRMSKDF---GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+ +R SK G+L ++D+ + G L A ++ +M + + T W
Sbjct: 253 YCIRACLHPNRNSKSKLTDGVLLGT----ALLDMYAKCGSLLYARRVFDAMPARNEVT-W 307
Query: 306 RTLLG 310
L+G
Sbjct: 308 SALIG 312
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/461 (40%), Positives = 292/461 (63%), Gaps = 2/461 (0%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L G IH ++ G L+ ++ +L+++Y AC+LF+ IP +TV+WN +I+
Sbjct: 152 ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ N R+ + F+ + R G + D+ T L +LQAC HLG + E IH + G+
Sbjct: 212 AQVTNGCAREGIDYFNKMRR--LGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGF 269
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
G+K+ + +L+ Y+K G L ++ VF + D V+W+AM++G A +G GR+AI+ F +
Sbjct: 270 GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFES 329
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M G+ PD TFT +LSACSH GLV+EG + + MS+ +GI P + HY C+VDLLGR G
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCG 389
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
LL+ AY++I +M ++P++ +W LLGACR+H ++ LG+ V EHLI ++ + +Y++L N
Sbjct: 390 LLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSN 449
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+YS+ W+ ++R + E+GL+ TPG S+I H F V D SHP +IY L+E
Sbjct: 450 MYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEE 509
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ +++ AGY ++ L ++ E K + ++ HSEKLAIAFG+L + G + + KNLRI
Sbjct: 510 LLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRI 569
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH+ AK++S + R +IIRD RFHHF +G CSC DYW
Sbjct: 570 CGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 154/320 (48%), Gaps = 23/320 (7%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+IHARV + D + L+ Y+ + +A KLFD++P +D V+WN LIS + R
Sbjct: 60 EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCL 119
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+L F + E S KP++VT L ++ AC GAL+ G+ IH + + G ++ +
Sbjct: 120 HM--SLTAFYTMKFEMS-VKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKV 174
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
NSLI MY K G L A +F+ +P+ + VSW+++I+ NG R+ I+ F M+R G+
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 231 FPDDQTFTGVLSACSHCGLVD-----EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
D+ T +L AC H G+ G+MF I ++D + G
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIAT------ALLDTYAKLGR 288
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE--SGDYVLLL 343
L +Y + T +G D W +L H LG I+ L E A + D+V
Sbjct: 289 LSASYGVFTEVGF-ADRVAWTAMLAGYAAHG---LGREAIK-LFESMANKGLEPDHVTFT 343
Query: 344 NLYSSVGDWEKVKELREFMN 363
+L S+ V E + + N
Sbjct: 344 HLLSACSHSGLVNEGKSYFN 363
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/461 (40%), Positives = 292/461 (63%), Gaps = 2/461 (0%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L G IH ++ G L+ ++ +L+++Y AC+LF+ IP +TV+WN +I+
Sbjct: 152 ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ N R+ + F+ + R G + D+ T L +LQAC HLG + E IH + G+
Sbjct: 212 AQVTNGCAREGIDYFNKMRR--LGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGF 269
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
G+K+ + +L+ Y+K G L ++ VF + D V+W+AM++G A +G GR+AI+ F +
Sbjct: 270 GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFES 329
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M G+ PD TFT +LSACSH GLV+EG + + MS+ +GI P + HY C+VDLLGR G
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCG 389
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
LL+ AY++I +M ++P++ +W LLGACR+H ++ LG+ V EHLI ++ + +Y++L N
Sbjct: 390 LLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSN 449
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+YS+ W+ ++R + E+GL+ TPG S+I H F V D SHP +IY L+E
Sbjct: 450 MYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEE 509
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ +++ AGY ++ L ++ E K + ++ HSEKLAIAFG+L + G + + KNLRI
Sbjct: 510 LLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRI 569
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH+ AK++S + R +IIRD RFHHF +G CSC DYW
Sbjct: 570 CGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 155/320 (48%), Gaps = 23/320 (7%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+IHARV + D + L+ Y+ + +A KLFD++P +D V+WN LIS + R
Sbjct: 60 EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCL 119
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+L F + E S KP++VT L ++ AC+ GAL+ G+ IH + + G ++ +
Sbjct: 120 HM--SLTAFYTMKFEMS-VKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKV 174
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
NSLI MY K G L A +F+ +P+ + VSW+++I+ NG R+ I+ F M+R G+
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 231 FPDDQTFTGVLSACSHCGLVD-----EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
D+ T +L AC H G+ G+MF I ++D + G
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIAT------ALLDTYAKLGR 288
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE--SGDYVLLL 343
L +Y + T +G D W +L H LG I+ L E A + D+V
Sbjct: 289 LSASYGVFTEVGF-ADRVAWTAMLAGYAAHG---LGREAIK-LFESMANKGLEPDHVTFT 343
Query: 344 NLYSSVGDWEKVKELREFMN 363
+L S+ V E + + N
Sbjct: 344 HLLSACSHSGLVNEGKSYFN 363
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 294/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S + LF M ++ ++ F + K C ++ G Q+HA ++ G
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y LD + + ++D+Y A FD IP D VAW +IS I N A +F
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G PD+ T + +A + L ALE G +IH + + + SL+ MY+K
Sbjct: 608 QMRL--MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A+ +FK + ++ +W+AM+ GLA +G G++ ++ F M+ G+ PD TF GV
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV E + M D+GI P I HY C+ D LGRAGL+ QA LI SM ++
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++++RTLL ACR+ G+RV L+EL+ +S YVLL N+Y++ W+++K R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ PG S I +K +H FVVDD S+ + IY+ + ++ + +K GYV E
Sbjct: 846 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDF 905
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK AL YHSEKLA+AFG+L+TPP T IRV KNLR+C DCHN K ++ VYN
Sbjct: 906 TLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYN 965
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC DYW
Sbjct: 966 REIVLRDANRFHRFKDGICSCGDYW 990
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 30/308 (9%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
F M + + + + +K SL G Q+H L+ G L + +L+++Y
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
K A +FD + +RD ++WN +I+ +N +A+CLF L R G KPD T
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR--CGLKPDQYTMT 420
Query: 138 LVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL+A + L L +++H + + S + +LI YS+ + A E+
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHN 479
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
D+V+W+AM++G + G ++ F M + G DD T V C +++G
Sbjct: 480 FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG--- 536
Query: 257 LDRMSKDFGILPNIHHY----GCVVDLLGRAGLLD--------QAYQLITSMGVKPDSTI 304
+H Y G +DL +G+LD A Q PD
Sbjct: 537 -----------KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 305 WRTLLGAC 312
W T++ C
Sbjct: 586 WTTMISGC 593
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
LM G HAR+L + L+ L+ +YS A ++FD++P RD V+WN +++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 106 YIRN-----QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
Y ++ + + A LF L ++ +T +L+ C H G + E H Y
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDV--VYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
+ G + +L+ +Y K G + +F+ MP +DVV W+ M+ G +AI+
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 221 SFGAMQRAGVFPDDQTF 237
A +G+ P++ T
Sbjct: 233 LSSAFHSSGLNPNEITL 249
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
L+L C H L F E R+ L N+LI+MYSKCGSL A VF MP++
Sbjct: 55 LMLGKCTHARILTFEENPERF-----------LINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 198 DVVSWSAMISGLAMNG-----HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
D+VSW+++++ A + + + A F +++ V+ T + +L C H G V
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
F K G+ + G +V++ + G + + L M + D +W +L A
Sbjct: 164 SESFHGYACK-IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 1 MVRAYSMSS-----SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
++ AY+ SS + ++ F LF +RQ + T+ S +K C+ + H
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
+ G D + L+++Y F K E LF+E+P RD V WN+++ Y+ +A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 116 LCLFDNLNREESGCKPDDVTCLLV 139
+ L + SG P+++T L+
Sbjct: 231 IDLSSAFH--SSGLNPNEITLRLL 252
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/502 (41%), Positives = 303/502 (60%), Gaps = 13/502 (2%)
Query: 14 GFYLFEKMRQKRIPTNPFACS------FA--IKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
G Y +K++ P P+ C+ FA + C + G QIH+ +++ Y+
Sbjct: 342 GVYAIDKLKLSN-PNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHV 400
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ ++L+D+Y+ K EA +F+ +P+RD V+ +IS Y + +AL LF L E
Sbjct: 401 FVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGE 460
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
G K + VT VL A + L AL+ G+++H ++ S + L NSLI MYSKCG+L
Sbjct: 461 --GMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLT 518
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSAC 244
+ +F M E+ V+SW+AM+ G + +G GR+ ++ F M + V PD T VLS C
Sbjct: 519 YSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGC 578
Query: 245 SHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
SH GL D+G+ +F D S + P + HYGCVVDLLGR+G +++A++ I M +P +
Sbjct: 579 SHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAA 638
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IW +LLGACR+H +V +GE + L+E++ +G+YV+L NLY+S G WE V LR+ M
Sbjct: 639 IWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLML 698
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+K + PG S+I L V+H F D SHPR EI + E++ K GYV +++ LH
Sbjct: 699 KKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLH 758
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ E+K L HSEKLA++FG++A+P IRV KNLRICVDCHNFAK +S VY REV
Sbjct: 759 DVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREV 818
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
+RD+ RFH G+CSC DYW
Sbjct: 819 SLRDKNRFHRIVGGKCSCEDYW 840
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 135/280 (48%), Gaps = 28/280 (10%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C+ + G ++HA +++ Y L T L+ LY+ + +A +FDE+P+R+ V+W
Sbjct: 253 CVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSW 312
Query: 100 NVLISCYIRNQRTRDALCLF-------------------DNLNREESGCKPDDVTCLLVL 140
+IS Y + AL LF N NR +P++ T VL
Sbjct: 313 TAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVL 372
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+C G +IH I + Y + + +SL+ MY+K G + A VF+ +PE+DVV
Sbjct: 373 TSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVV 432
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
S +A+ISG A G +A+E F +Q G+ + T+TGVL+A S +D G + +
Sbjct: 433 SCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHV 492
Query: 261 SK----DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ F +L N ++D+ + G L + ++ +M
Sbjct: 493 LRSEIPSFVVLQN-----SLIDMYSKCGNLTYSRRIFDTM 527
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 6/245 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ EE LF +++ + + +N + + +L G Q+H VLR
Sbjct: 437 IISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE 496
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L +L+D+YS + ++FD + +R ++WN ++ Y ++ R+ L LF
Sbjct: 497 IPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLF- 555
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG--YGSKMNLCNSLIAMY 178
L REE+ KPD VT L VL C+H G + G I +S KM ++ +
Sbjct: 556 TLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLL 615
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+ G + AFE K MP E W +++ A H I F Q + P +
Sbjct: 616 GRSGRVEEAFEFIKKMPFEPTAAIWGSLLG--ACRVHSNVDIGEFAGQQLLEIEPGNAGN 673
Query: 238 TGVLS 242
+LS
Sbjct: 674 YVILS 678
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 59/284 (20%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L C + A G+++H ++ + Y + L LI +Y+KC SLG A VF MPE++
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGA---MQRAGVF------------------PDDQTF 237
VVSW+AMIS + G+ A+ F A + GV+ P++ TF
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368
Query: 238 TGVLSACS-----------HCGLVD--------EGMMFLDRMSKD---------FGILPN 269
VL++C+ H ++ G LD +KD F LP
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 428
Query: 270 IHHYGCVVDLLGRA--GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV 324
C + G A GL ++A +L + G+K + + +L A + LG++V
Sbjct: 429 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQV 488
Query: 325 IEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
H+ L+++ VL L+++YS G+ + + + M E+
Sbjct: 489 HNHV--LRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYER 530
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 297/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF +M ++ + + A++ C + L G+++H ++R G
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +M L+ +YS ++ A +FDE+ +R V+WN +I +N + DA+ LF
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E KPD T + V+ A A + IH Y + + +LI MY+K
Sbjct: 353 RMQLE--NVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 410
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A +F E+ V++W+AMI G +G G+ A+E F M+ G+ P++ TF V
Sbjct: 411 CGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSV 470
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG + M +D+G+ P + HYG +VDLLGRAG LD+A+ I M + P
Sbjct: 471 LSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDP 530
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++ +LGAC++HK+V L E + + EL QE +VLL N+Y++ W+ V +R
Sbjct: 531 GLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRT 590
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + GLQ TPG S I LK +H F +H + EIY L ++ +++K GYV + T
Sbjct: 591 AMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPD-TD 649
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H++ + K L+ HSEKLAIAFG++ T PGTTI++ KNLR+C DCHN K++S V
Sbjct: 650 SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTG 709
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G+CSC DYW
Sbjct: 710 REIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 3/311 (0%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+RA + S F M P + +K C L G +HA++ G
Sbjct: 31 LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
++ T L ++Y+ + +A ++FD +P RD VAWN L++ Y RN R A+ +
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ +EE G +PD +T + VL ACA+ AL + H + G +N+ +++ Y KC
Sbjct: 151 M-QEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G + A VF MP K+ VSW+AMI G A NG R+A+ F M GV D + L
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
AC G +DEGM + + + G+ N+ ++ + + +D A + + +
Sbjct: 270 QACGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 302 STIWRTLLGAC 312
+ W ++ C
Sbjct: 329 VS-WNAMILGC 338
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/507 (36%), Positives = 299/507 (58%), Gaps = 5/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + P + LF KM+++ + + + +H + +G
Sbjct: 204 MITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNG 263
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +++ +Y+ A +FD + +R+ ++WN ++S Y +N R DAL LF+
Sbjct: 264 FIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFN 323
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E C P+ VT L+++ AC++LG+ G K+H ++ L N+++ MY K
Sbjct: 324 QMQASE--CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 381
Query: 181 CGSLGMAFEVFKG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
CG L A E+F + E+DV SW+ +ISG ++GHG++A+E F MQ GV P+D TFT
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 441
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+LSACSH GL+DEG M+K + P + HY C+VD+LGRAG L++A++LI +
Sbjct: 442 SILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPS 500
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P +W LL ACRIH + LGE +L +L+ + +G YVL+ N+Y++ W++V+ +
Sbjct: 501 RPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMV 560
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M +GL+ S I VH F D S P E+Y+ ++ + ++K+ GYV ++
Sbjct: 561 RQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDL 620
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH++ E+K + L+YHSEKLA+AFG++ G I+V KNLR+C DCH K +S +
Sbjct: 621 SCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSI 680
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y R++I+RD RFHHF+ GRCSC DYW
Sbjct: 681 YGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 6/319 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY+ + E L+ M++ + N F F +K C + G +H +V+R G
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+D+Y+ + +A ++FD + RD V W +I+ Y + +R AL LF
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G D++T + V A LG +H Y +G+ +++ NS++ MY+K
Sbjct: 223 KM--QEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A VF M E++ +SW++M+SG NG DA+ F MQ + P+ T +
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340
Query: 241 LSACSHCGLVDEGMMFLD-RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV- 298
+SACS+ G G + +S I + + ++D+ + G LD A ++ + +
Sbjct: 341 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELG 398
Query: 299 KPDSTIWRTLLGACRIHKH 317
+ D + W L+ +H H
Sbjct: 399 ERDVSSWNVLISGYGVHGH 417
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 303/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + P + ++ +MR+ + + I+ C ++ G +H +LR G
Sbjct: 180 MVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHG 239
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D T+L+D+Y+ AC++F + R+ V+W+ +IS + +N ++ +AL LF
Sbjct: 240 MRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFR 299
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ + SG +PD + L AC+++G L+ G +H +I + L + I MYSK
Sbjct: 300 NM--QASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSK 356
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F + ++D++ W+AMI+ +G G+DA+ F M G+ PD TF +
Sbjct: 357 CGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASL 416
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV+EG ++ RM F I P HY C+VDLL R+GL+++A L+TSM +P
Sbjct: 417 LSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW LL C +K + LGE + ++++EL+ + G L+ NLY++ W+KV+++R+
Sbjct: 477 TVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRK 536
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G + PGCS+I ++G H FV++D SHP+ EI + +++ +++ GY+
Sbjct: 537 LMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEF 596
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H+L E K LSYHSE+LAIAFG+L T PGT + + KNLR+C DCH+ K +S + +
Sbjct: 597 VYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIAD 656
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 657 REIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S SP +F + P + + A+ C + L GG + R GY+ D
Sbjct: 84 HSRRGSPASALRVFRALPPAARP-DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ ++L+ LY+ + +A K+F +P+RD V W+ +++ ++ + DA+ ++ +
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-- 200
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G K D+V + V+QAC + G +H ++ HG + SL+ MY+K G L
Sbjct: 201 REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
+A VF M ++ VSWSAMISG A NG +A+ F MQ +G+ PD L AC
Sbjct: 261 DVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV-----VDLLGRAGLLDQAYQLITSMGVK 299
S+ G FL G + + C+ +D+ + G L A Q++ +M
Sbjct: 321 SNIG-------FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASA-QMLFNMISD 372
Query: 300 PDSTIWRTLLGACRIH 315
D +W ++ C H
Sbjct: 373 RDLILWNAMIACCGAH 388
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+PD T L L ACA LG L GE + + GY + +C+SL+ +Y++ G++G A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-- 245
+VF MP +D V+WS M++G G DAI+ + M+ GV D+ GV+ AC+
Sbjct: 163 VKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222
Query: 246 ---------HCGLVDEGMM-----------------FLDRMSKDFGIL--PNIHHYGCVV 277
H L+ GM LD + FG++ N + ++
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282
Query: 278 DLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV 324
+ G D+A +L +M G++PDS + L AC + LG V
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/514 (39%), Positives = 309/514 (60%), Gaps = 12/514 (2%)
Query: 1 MVRAYSMSSS-PEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RA + S+ + L+ +M Q + + F +K C +L G QIHA++L+
Sbjct: 97 LIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILK 156
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + +L+ Y+T ++ A +FD + +R V+WNV+I ++R AL L
Sbjct: 157 LGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNL 216
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN---LCNSLI 175
F + + +PD T + ACA +G+L G H ++ + ++N L SL+
Sbjct: 217 FGEMQK---FFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLV 273
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDD 234
MY KCGSL +A ++F MP++DV SW++MI G + +G A+E FG M R + P+
Sbjct: 274 DMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNA 333
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF GVLSAC+H GLV EG + D M ++ I P + HYGC+VDLL RAGL+D+A +++
Sbjct: 334 ITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVS 393
Query: 295 SMGVKPDSTIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDW 352
+M ++PD IWR+LL AC + + V L E + ++E + SG YVLL +Y+S W
Sbjct: 394 NMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRW 453
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
V +R+ M +KG+ PGCS+I + GV HEF D SHP+ EIY LD I ++++
Sbjct: 454 NDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERV 513
Query: 413 GYVAEIT-SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNF 471
GY + + + + + + K +L HSE+LAIAFG+L T PG IR+ KNLR+C +CH
Sbjct: 514 GYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQV 573
Query: 472 AKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S V+NRE+I+RDR+RFHHF++G CSC DYW
Sbjct: 574 TKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 607
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/507 (40%), Positives = 294/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RAY+ E L+ +M + + F +K C L G ++H RV+R
Sbjct: 136 LIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRT 195
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + L+D+Y+ EA +FD RD V WN +I+ +N R +AL L
Sbjct: 196 SWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALC 255
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
N+ E G P VT + + A A GAL G ++H Y G+GS+ L SL+ MY+
Sbjct: 256 RNMAAE--GIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYA 313
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFT 238
K G + +A +F + ++++SW+AMI G M+GH A E F M+ A V PD TF
Sbjct: 314 KSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFV 373
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+H G+V E D M + I P + HY C+VD+LG +G +A +I M V
Sbjct: 374 GVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLV 433
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KPDS IW LL C+IHK+V L E + LIEL+ +++G+YVLL N+Y+ G WE+ +
Sbjct: 434 KPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARV 493
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M +GL+ CS I LKG H F+V D SHPR +EIY+ L+ + + GYV +
Sbjct: 494 RKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDT 553
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
TS HN+ +EK N + HSE+LAIAFG+++TPPGT + V KNLR+C DCH K++S +
Sbjct: 554 TSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQI 613
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD R+HHF G CSC D+W
Sbjct: 614 EQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P N + ++ C+ ++ G Q+HAR+L G LD+ L T L+DLY++ A +
Sbjct: 60 PYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARR 119
Query: 87 LFDEIPQRDTV-AWNVLISCYIRNQRTRDALCLFDNLNREESGC---KPDDVTCLLVLQA 142
LFDE+P + V WNVLI Y R+ A+ L+ RE C +PD+ T VL+A
Sbjct: 120 LFDEMPNQGNVFLWNVLIRAYARDGPREAAIELY----REMLACGSMEPDNFTYPPVLKA 175
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA L L G ++H + + + + +C LI MY+KCG + A+ VF +D V W
Sbjct: 176 CAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVW 235
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
++MI+ NG +A+ M G+ P T
Sbjct: 236 NSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLV 271
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK- 197
+L++C A+ G ++H + G G L L+ +Y+ CG + +A +F MP +
Sbjct: 69 ILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQG 128
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGMMF 256
+V W+ +I A +G AIE + M G PD+ T+ VL AC+ + G
Sbjct: 129 NVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREV 188
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
DR+ + ++ ++D+ + G +D+A+ + S V+ D+ +W +++ AC
Sbjct: 189 HDRVMRT-SWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNSMIAAC 242
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 310/538 (57%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + E F M I + + C + L+ G +H V G
Sbjct: 208 LISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKG 267
Query: 61 YQLDSQLMTTLMDLYS----------TFE--------KSFEA-----CKL---------F 88
+ +L+ L+D+Y+ F+ +S+ A CKL F
Sbjct: 268 MLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLF 327
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++ RD V +N LI+ YI R R+AL LF + R + + D+ T + +L ACA LGA
Sbjct: 328 DQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHD--LRADNFTMVSLLTACASLGA 385
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L G +H I + + L +L+ MY KCG + A VF+ M +DV +WSAMI+G
Sbjct: 386 LPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAG 445
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G+ A+E F M+ G P+ T+ +L+ACSH L+DEG ++ + M I P
Sbjct: 446 LAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRP 505
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
I HYGC++DLLGR+GLLD+A L+ +M ++P++ IW ++L ACR+HK L EHL
Sbjct: 506 LIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHL 565
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L+ E YV L N+Y WE ++R M E+G++ G S+I + G VH+F+V
Sbjct: 566 LKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVC 625
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALSYHSEKLAIAFGV 447
D +HP+I EI M++EI ++LK GY + ITS++ ++ EEK +AL HSEK+AIAFG+
Sbjct: 626 DRTHPQIMEITAMMEEITRRLKSVGY-SPITSQITVDVDEEEKEHALLAHSEKIAIAFGL 684
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ P + + KNLR+C DCH+ K++S ++NRE+I+RDR RFHHFR+G CSCND+W
Sbjct: 685 ISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 197/458 (43%), Gaps = 88/458 (19%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMK------FCSLMGGLQIHARVLR 58
+ SS PE L+ +MR+ + T+ F F KCC + C ++ HA R
Sbjct: 78 FRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQML-----HAACFR 132
Query: 59 DGYQLDSQLMTT-LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS------------C 105
L++ ++ +Y + +A + FD+IP +D VAW +IS C
Sbjct: 133 TMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWC 192
Query: 106 YIRNQRTRDALC---LFDNLNRE--------------ESGCKPDDVTCLLVLQACAHLGA 148
+R+ R+ + L +R G +PD+VT + +L ACA L
Sbjct: 193 LLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKD 252
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG--------------- 193
L FG +H+ + E G L +LI MY+KCG +G A+EVF
Sbjct: 253 LVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMID 312
Query: 194 -----------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
M ++D+V+++++I+G G R+A+ F M+R + D+ T
Sbjct: 313 GYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFT 372
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+L+AC+ G + +G + + + +I+ ++D+ + G +++A + +M
Sbjct: 373 MVSLLTACASLGALPQGRALHACIEQRL-VEVDIYLGTALLDMYLKCGRVEEASLVFQAM 431
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNL--YSSVG 350
V+ D W ++ + +G+ +E+ +K S Y+ +L +S +
Sbjct: 432 SVR-DVHTWSAMIAGLAFNG---MGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLL 487
Query: 351 DWEKV--KELREFMNEKGLQTTPGC--STIGLKGVVHE 384
D ++ +E+R N + L GC +G G++ E
Sbjct: 488 DEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDE 525
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 143/328 (43%), Gaps = 52/328 (15%)
Query: 45 SLMGGLQIHARVLRDGYQLD----SQLMTTLMDLYSTFEK---SFEACKLFDEIPQRDTV 97
S+ ++HA ++ G L S L+ +L++ ++ + + C LFD +P +
Sbjct: 11 SVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALC-LFDRMPCSTFL 69
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIH 156
L +C+ + L L+ + R +G D T + + CA A + + +H
Sbjct: 70 FDTALRACFRASSGPESPLILYRRMRR--TGVCTDAFTFHFLFKCCARGRAHVLLCQMLH 127
Query: 157 RYISEHGYGSKMNLC-NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA----- 210
S + L N +I MY + G G A F +P KD V+W+ +ISGLA
Sbjct: 128 AACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLL 187
Query: 211 ---------------------MNGHGR-----DAIESFGAMQRAGVFPDDQTFTGVLSAC 244
++G+ R +A++ F +M G+ PD+ T G+LSAC
Sbjct: 188 DDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSAC 247
Query: 245 SHCGLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+ + ++F L ++ + G+L + ++D+ + G + +A+++ ++G
Sbjct: 248 AQL----KDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRR 303
Query: 302 STIWRTLL-GACRIHKHVTLGERVIEHL 328
W ++ G C++ HV + + + +
Sbjct: 304 PQSWNAMIDGYCKL-GHVDVARYLFDQM 330
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/461 (40%), Positives = 277/461 (60%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL G ++H+RV G ++D + T L+++Y + EA F++I + + V+W+ +++
Sbjct: 25 SLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLA 84
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y +N R AL L+ + G P+ VT + +L AC+ LGAL G KIH ++E G+
Sbjct: 85 AYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGF 144
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ + +CN+L+ Y +CGSLG A VF GM +DV+SWS+MIS A G +A+E +
Sbjct: 145 DTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHR 204
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M G PDD F VL ACS+ G+V+ F + D + P + HY C+VD+LGRAG
Sbjct: 205 MLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAG 264
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
L A L+ M P ++ T+L AC+++ V GE E + EL + S Y+ L N
Sbjct: 265 KLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLAN 324
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+YS+ + +R+ M E+G++ PGCS I + VHEF+ D HP+ +EIY +
Sbjct: 325 IYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQR 384
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ +Q+K AGY + L ++ +EK N L YHSEKLAIAFG+++TPPG +R+ KNLR+
Sbjct: 385 LGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRV 444
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH KV+S V RE+++RD RFHHF +G CSCNDYW
Sbjct: 445 CSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G + + VT + VL G+LE G ++H ++ G + + +L+ MY KC S+
Sbjct: 2 EIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSV 61
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLS 242
A F+ + +VVSWSAM++ A NGH R A+E + M R G+ P+ TF +L
Sbjct: 62 EEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLD 121
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
ACS G + EG +++ G ++ +V+ GR G L A + M + D
Sbjct: 122 ACSFLGALAEGRKIHAAVAER-GFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMR-RRDV 179
Query: 303 TIWRTLLGA 311
W +++ A
Sbjct: 180 ISWSSMISA 188
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLR 58
M+ AY+ + L+ +M R P +F + C +L G +IHA V
Sbjct: 82 MLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAE 141
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + L++ Y +A +FD + +RD ++W+ +IS + + R +A+ L
Sbjct: 142 RGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMEL 201
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEF-GEKIHRYISEHGYGSKMNLCNSLIAM 177
+ + E G PDD+ + VL AC++ G +E G+ + + + ++ +
Sbjct: 202 YHRMLSE--GTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDV 259
Query: 178 YSKCGSLGMAFEVFKGMP 195
+ G L A ++ + MP
Sbjct: 260 LGRAGKLRDAEDLLRLMP 277
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 292/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E LF ++R++ + N + +K + Q+HA ++ G+ D+ ++ L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D Y +A ++F+E D +A +I+ + A+ LF + R+ G +P
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK--GLEP 503
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +L ACA L A E G+++H ++ + + S N+L+ Y+KCGS+ A F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+PE+ VVSWSAMI GLA +GHG+ A+E FG M G+ P+ T T VL AC+H GLVD
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M + FGI HY C++DLLGRAG LD A +L+ SM + +++IW LLGA
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
R+HK LG+ E L L+ ++SG +VLL N Y+S G W +V ++R+ M + ++ P
Sbjct: 684 SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEP 743
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
S I +K VH F+V D SHP EIY L E+ + AG+V + +LH+L EK
Sbjct: 744 AMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKE 803
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
LS+HSE+LA+AF +L+TPPG IRV KNLRIC DCH K +S + +RE+IIRD RF
Sbjct: 804 LLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRF 863
Query: 492 HHFREGRCSCNDYW 505
HHFR+G CSC DYW
Sbjct: 864 HHFRDGTCSCGDYW 877
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 7/297 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AYS + P F MR + + N FA +KC G Q+HA + G
Sbjct: 74 LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + L+ +Y F +A ++F+E +R+ V+WN L+S Y++N + DA+ +F
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVF 190
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ SG +P + V+ AC +E G ++H + GY + N+L+ MY
Sbjct: 191 GEM--VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYM 248
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + +A +F+ MP+ DVVSW+A+ISG +NGH AIE M+ +G+ P+ T +
Sbjct: 249 KMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSS 308
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+L ACS G D G M K + G +VD+ + LD A ++ M
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM 364
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L+ G +HA +L+ G + L+ YS + A + FDEIP V+W+ L++
Sbjct: 19 ALLPGAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVT 76
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y N R A+ F + E C + +L A LGA ++H G+
Sbjct: 77 AYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA-----QVHAMAMATGF 131
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
GS + + N+L+AMY G + A VF + E++ VSW+ ++S N DAI+ FG
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M +G+ P + F+ V++AC+ ++ G + M G ++ +VD+ +
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMYMKM 250
Query: 284 GLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELK 332
G +D A + M PDS + W L+ C ++ H R IE L+++K
Sbjct: 251 GRVDIASVIFEKM---PDSDVVSWNALISGCVLNGH---DHRAIELLLQMK 295
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 169/376 (44%), Gaps = 21/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + + +F +M I F S + C ++ G Q+HA V+R G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D L+D+Y + A +F+++P D V+WN LIS + N A+ L
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL- 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + SG P+ T +L+AC+ GA + G +IH ++ + S + L+ MY+K
Sbjct: 292 -LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A +VF M +D++ +A+ISG + G +A+ F +++ G+ + T V
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT--SMGV 298
L + + + ++ G + + H ++D + L A ++ S G
Sbjct: 411 LKSTASLEAASTTRQ-VHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGD 469
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL--KAQESGDYVL--LLNLYSSVGDWEK 354
T T L C GE I+ +E+ K E +VL LLN +S+ +E+
Sbjct: 470 IIACTSMITALSQC------DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 355 VKEL------REFMNE 364
K++ R+FM++
Sbjct: 524 GKQVHAHLIKRQFMSD 539
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 300/494 (60%), Gaps = 3/494 (0%)
Query: 13 EGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E F LF+ M Q +P + + A++ C L G Q+HA + + G D +L
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSL 376
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ +A LFD++ +DTV+++ L+S Y++N + +A +F + + +P
Sbjct: 377 LSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM--QACNVQP 434
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T + ++ AC+HL AL+ G+ H + G S+ ++CN+LI MY+KCG + ++ ++F
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIF 494
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP +D+VSW+ MI+G ++G G++A F M+ PDD TF ++SACSH GLV
Sbjct: 495 DVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVT 554
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + M+ +GI P + HY +VDLL R G LD+AYQ I M +K D +W LLGA
Sbjct: 555 EGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGA 614
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK++ LG++V + +L + +G++VLL N++S+ G +++ E+R E+G + +P
Sbjct: 615 CRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSP 674
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS I + G +H F+ D SH + +EIYQ LD I + GY A+ + L ++ EEK
Sbjct: 675 GCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKE 734
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
AL YHSEKLAIAFGVL TI V KNLR+C DCH K ++ V R +I+RD RF
Sbjct: 735 KALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRF 794
Query: 492 HHFREGRCSCNDYW 505
HHF+ G+CSC D+W
Sbjct: 795 HHFKNGQCSCGDFW 808
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAYS+ R++ N + F +K C L +H R G
Sbjct: 100 LIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAG 159
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + T L+D+Y+ A +F +P RD VAWN +++ Y + + D +
Sbjct: 160 LHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLL 219
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY----ISEHGYGSKMNLCNSLIA 176
+ + + P+ T + +L A GAL G +H Y S H + + + +L+
Sbjct: 220 LMQDDHA---PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLD 276
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQ 235
MY+KCG L A VF+ M ++ V+WSA++ G + G +A F M G+ F
Sbjct: 277 MYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPT 336
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+ L AC++ + G ++K G+ ++ ++ + +AGL+DQA L
Sbjct: 337 SVASALRACANLSDLCLGKQLHALLAKS-GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQ 395
Query: 296 MGVKPDSTIWRTLL 309
M VK D+ + L+
Sbjct: 396 MVVK-DTVSYSALV 408
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y + +E F +F KM+ + + I C +L G H V+ G
Sbjct: 407 LVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRG 466
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+D+Y+ + + ++FD +P RD V+WN +I+ Y + ++A LF
Sbjct: 467 IASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALF- 525
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
L+ + C+PDDVT + ++ AC+H G + G++ H ++G +M ++ + +
Sbjct: 526 -LDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLA 584
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMI 206
+ G L A++ +GMP K DV W A++
Sbjct: 585 RGGFLDEAYQFIQGMPLKADVRVWGALL 612
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD+IP +N LI Y + R R +P++ T VL+AC+ L
Sbjct: 85 LFDQIPAPGIHDYNALIRAY--SLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSAL 142
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
L +H + + G + + + +L+ +Y+KC S A VF+ MP +DVV+W+AM+
Sbjct: 143 LDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAML 202
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+G A++G D I MQ P+ T +L + G + +G R + +
Sbjct: 203 AGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQG-----RAVHAYSV 256
Query: 267 LP---NIHHYGCVV-----DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ H G +V D+ + G L A ++ +M V+ + T W L+G
Sbjct: 257 RACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT-WSALVG 307
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 292/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E LF ++R++ + N + +K + Q+HA ++ G+ D+ ++ L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D Y +A ++F+E D +A +I+ + A+ LF + R+ G +P
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK--GLEP 503
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +L ACA L A E G+++H ++ + + S N+L+ Y+KCGS+ A F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+PE+ VVSWSAMI GLA +GHG+ A+E FG M G+ P+ T T VL AC+H GLVD
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M + FGI HY C++DLLGRAG LD A +L+ SM + +++IW LLGA
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
R+HK LG+ E L L+ ++SG +VLL N Y+S G W +V ++R+ M + ++ P
Sbjct: 684 SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEP 743
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
S I +K VH F+V D SHP EIY L E+ + AG+V + +LH+L EK
Sbjct: 744 AMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKE 803
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
LS+HSE+LA+AF +L+TPPG IRV KNLRIC DCH K +S + +RE+IIRD RF
Sbjct: 804 LLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRF 863
Query: 492 HHFREGRCSCNDYW 505
HHFR+G CSC DYW
Sbjct: 864 HHFRDGTCSCGDYW 877
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 7/297 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AYS + P F MR + + N FA +KC G Q+HA + G
Sbjct: 74 LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + L+ +Y F +A ++F+E +R+ V+WN L+S Y++N + DA+ +F
Sbjct: 131 FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVF 190
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ SG +P + V+ AC +E G ++H + GY + N+L+ MY
Sbjct: 191 GEM--VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYM 248
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + +A +F+ MP+ DVVSW+A+ISG +NGH AIE M+ +G+ P+ T +
Sbjct: 249 KMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSS 308
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+L ACS G D G M K + G +VD+ + LD A ++ M
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM 364
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 17/291 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L+ G +HA +L+ G + L+ YS + A ++FDEIP V+W+ L++
Sbjct: 19 ALLPGAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVT 76
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y N R A+ F + E C + +L A LGA ++H G+
Sbjct: 77 AYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA-----QVHAMAMATGF 131
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
GS + + N+L+AMY G + A VF + E++ VSW+ ++S N DAI+ FG
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M +G+ P + F+ V++AC+ ++ G + M G ++ +VD+ +
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMYMKM 250
Query: 284 GLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELK 332
G +D A + M PDS + W L+ C ++ H R IE L+++K
Sbjct: 251 GRVDIASVIFEKM---PDSDVVSWNALISGCVLNGH---DHRAIELLLQMK 295
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 169/376 (44%), Gaps = 21/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + + +F +M I F S + C ++ G Q+HA V+R G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D L+D+Y + A +F+++P D V+WN LIS + N A+ L
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL- 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + SG P+ T +L+AC+ GA + G +IH ++ + S + L+ MY+K
Sbjct: 292 -LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A +VF M +D++ +A+ISG + G +A+ F +++ G+ + T V
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT--SMGV 298
L + + + ++ G + + H ++D + L A ++ S G
Sbjct: 411 LKSTASLEAASTTRQ-VHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGD 469
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL--KAQESGDYVL--LLNLYSSVGDWEK 354
T T L C GE I+ +E+ K E +VL LLN +S+ +E+
Sbjct: 470 IIACTSMITALSQC------DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 355 VKEL------REFMNE 364
K++ R+FM++
Sbjct: 524 GKQVHAHLIKRQFMSD 539
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 310/523 (59%), Gaps = 32/523 (6%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ L+ +M I + + + +K C +L G ++H+R L+ G + + +M
Sbjct: 130 DAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIM 189
Query: 73 DLYSTFEKSFEACKLFDEIPQ------------------------------RDTVAWNVL 102
+LY + +A ++F+E+P+ +DTV W +
Sbjct: 190 ELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
I ++RN+ AL F + E +P++ T + VL AC+ LGALE G +H Y+ +
Sbjct: 250 IDGFVRNEEMNRALEAFRGMQGE--NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF 307
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
+ + N+LI MYS+CGS+ A VF M ++DV++++ MISGL+MNG R AIE F
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M + P + TF GVL+ACSH GLVD G M++D+G+ P I HYGC+VDLLGR
Sbjct: 368 RVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGR 427
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
G L++AY LI +M + PD + TLL AC++HK++ LGE+V + L + +SG YVLL
Sbjct: 428 VGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLL 487
Query: 343 LNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQML 402
++Y+S G W++ ++R M E G+Q PGCS+I + +HEF++ D+ HPR IY+ L
Sbjct: 488 SHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKL 547
Query: 403 DEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNL 462
+E+N+ L++ GY E L ++ EK AL+ HSE+LAI +G+++T P T IRV KNL
Sbjct: 548 EELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNL 607
Query: 463 RICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
R+C DCH+ K+++ + R+V++RDR RFH+F G CSC DYW
Sbjct: 608 RVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
L IHA+++R+G+ D ++ L+ S A ++F + + LI ++ +
Sbjct: 66 LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSS 125
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
DA+ L+ + + PD+ +L+AC AL G ++H + G S
Sbjct: 126 GNYFDAIQLYSRMLHD--SILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRL 183
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPE------------------------------KDV 199
+ ++ +Y KCG LG A VF+ MPE KD
Sbjct: 184 VRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDT 243
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
V W+AMI G N A+E+F MQ V P++ T VLSACS G ++ G
Sbjct: 244 VCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 303
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
M K F I N+ ++++ R G +D+A + M + D + T++
Sbjct: 304 MRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-DVITYNTMI 351
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQI----HARV 56
M+ + + F M+ + + N F I C + CS +G L+I H+ +
Sbjct: 249 MIDGFVRNEEMNRALEAFRGMQGENVRPN----EFTIVCVLSACSQLGALEIGRWVHSYM 304
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ +L+ + L+++YS EA +FDE+ RD + +N +IS N ++R A+
Sbjct: 305 RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAI 364
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLI 175
LF + +P +VT + VL AC+H G ++FG KI H ++G ++ ++
Sbjct: 365 ELFRVMIGRR--LRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMV 422
Query: 176 AMYSKCGSLGMAFEVFKGM 194
+ + G L A+++ + M
Sbjct: 423 DLLGRVGRLEEAYDLIRTM 441
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D + +LQ H+ + IH + +G+ + L+ SKC ++ A +F
Sbjct: 48 DQKQIISLLQRSKHINQVL---PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 104
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ +V ++A+I G +G+ DAI+ + M + PD+ +L AC +
Sbjct: 105 QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALR 164
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
EG R K G+ N +++L G+ G L A ++ M P+ + T++
Sbjct: 165 EGREVHSRALK-LGLSSNRLVRLRIMELYGKCGELGDARRVFEEM---PEDVVASTVM 218
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
+IS L + H + + R G D +L +CS C +D + R+ + +
Sbjct: 52 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAID----YASRIFQ-Y 106
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLG 321
PN++ Y ++D +G A QL + M + PD+ + ++L AC + G
Sbjct: 107 THNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREG 166
Query: 322 ERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
V H LK S + ++ ++ LY G+ + + E M E + +T S+
Sbjct: 167 REV--HSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSD 224
Query: 379 KGVVHE 384
+G+V E
Sbjct: 225 QGLVEE 230
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 300/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS S E LF KM N F S +K S G Q+HA L+ G
Sbjct: 177 LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG 236
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y ++ + ++L+D+Y+ + EA +F+ + ++ V+WN LI+ + R + LF
Sbjct: 237 YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFL 296
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G +P T V ACA G+LE G+ +H ++ + G + N+LI MY+K
Sbjct: 297 QMLRQ--GFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAK 354
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF+ + ++D+VSW+++ISG A +G G +A++ F M +A V P++ TF V
Sbjct: 355 SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSV 414
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL+DEG + + M K I + H+ VVDLLGRAG L++A + I M +KP
Sbjct: 415 LTACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKP 473
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLG+CR+HK++ LG E + EL +SG +VLL N+Y+S G ++R+
Sbjct: 474 TAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRK 533
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E G++ P CS + ++ VH FV +D SHP EI +M ++I+ ++K GYV + +
Sbjct: 534 MMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSH 593
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + +++ L YHSEKLA+AF VL TPPG TIR+ KN+RIC DCH+ K S V
Sbjct: 594 VLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLG 653
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 654 REIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 177/369 (47%), Gaps = 17/369 (4%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C L G IHA + ++ D L+ ++++Y+ EA LFD++P +D V+W
Sbjct: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
VLIS Y ++ + +AL LF + G +P++ T +L+A + G ++H +
Sbjct: 175 TVLISGYSQSGQASEALALFPKM--LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFS 232
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
++GY +++ +SL+ MY++ + A +F + K+VVSW+A+I+G A G G +
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M R G P T++ V +AC+ G +++G + K G P + ++D+
Sbjct: 293 RLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDM 351
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-D 338
++G + A ++ + VK D W +++ H ++ E +++ K Q +
Sbjct: 352 YAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV--SHPRIN 396
++ +L S G ++ + E M + ++ V H V D+ R+N
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ----------VAHHVTVVDLLGRAGRLN 460
Query: 397 EIYQMLDEI 405
E + ++E+
Sbjct: 461 EANKFIEEM 469
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+P+ +L C +L L+ G IH +I + + L N ++ MY+KCGSL A +
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F MP KD+VSW+ +ISG + +G +A+ F M G P++ T + +L A S G
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGP 220
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
D L S +G N+H ++D+ R + +A + S+ K + W L+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALI 279
Query: 310 GACRIHKHVTLGERVIEHLIELKAQ 334
H GE V+ +++ Q
Sbjct: 280 AG---HARKGEGEHVMRLFLQMLRQ 301
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/540 (37%), Positives = 309/540 (57%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR-VLRD 59
M+R Y++ E + +MR+ + F S K C ++ G Q+HA+ +L
Sbjct: 113 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 172
Query: 60 GYQLDSQLMTTLMDLY----------STFEKSFE---------------------ACKLF 88
G+ D + +++DLY F++ E A LF
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++P +D VAW +++ Y +N R ++AL F + ++ G + D+VT V+ ACA LGA
Sbjct: 233 DDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM--QDVGMETDEVTLAGVISACAQLGA 290
Query: 149 LEFGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
++ I G+G N+ ++LI MYSKCGS A++VF+ M E++V S+S+MI
Sbjct: 291 VKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G AM+G A++ F M + + P+ TF G+LSACSH GLV++G +M K FG+
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P+ HY C+VDLLGRAG L++A L+ +M ++P+ +W LLGACRIH + + +
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN 470
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI-GLKGVVHEF 385
L +L+ G+Y+LL N+Y+S G WE+V +LR+ + EKG + PGCS G G +H+F
Sbjct: 471 ELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDF 530
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
D +HPR +EI Q L ++ ++L+ GY + S ++L +EK L HSEKLA+A+
Sbjct: 531 FAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAY 590
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L T G TI++ KN+RIC DCHN S + RE+I+RD +RFHHF G CSC ++W
Sbjct: 591 GLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 38/289 (13%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL--FDEIPQRDTVAWN 100
C+L + Q+HA ++R+G S ++T L+ + + + + L F ++ + W
Sbjct: 52 CTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWT 111
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-RYI 159
+I Y ++ + + R+ G P T + +AC ++ G+++H + I
Sbjct: 112 AMIRGYALQGLLSESTNFYTRMRRD--GVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS------------------ 201
G+ S + + NS+I +Y KCG LG A +VF M E+DVVS
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 202 -------------WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
W+AM++G A NG ++A+E F MQ G+ D+ T GV+SAC+ G
Sbjct: 230 GLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 249 LVDEGMMFLDRMSKD-FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
V D + FG N+ ++D+ + G D+AY++ M
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 262/420 (62%), Gaps = 2/420 (0%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
KLFDE+P+RD ++WN ++ Y+ N + +AL F + ESG PD+ T + +L A A
Sbjct: 16 KLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMR--ESGLVPDEATLVTMLSASAQ 73
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L LE G+ IH I +++ +L+ MY+KCG + + +F+ MP +DV +W+ M
Sbjct: 74 LCLLEHGQSIHSIIDSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVM 133
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I GLA +G G+DA+ F G+ P + TF GVL+ACS GLV EG + M+ +G
Sbjct: 134 ICGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYG 193
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P + HYGC+VDLLGRAGL+ +A ++I SM + PD +W +L ACRIH LGE++
Sbjct: 194 IEPEMEHYGCMVDLLGRAGLVFEAIKVIESMAISPDPVLWAMVLCACRIHGLAELGEKIG 253
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
LIEL G YV L ++Y++ WE V +R M E+ G S I +G VH F
Sbjct: 254 NRLIELDPTYDGHYVQLASIYANSRKWEDVVRVRRLMAERNTSKVAGWSLIEARGKVHRF 313
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
V H + EI +ML+ I +L AGYV ++ LH++G EEK NA+ HSE+LAIAF
Sbjct: 314 VAGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAF 373
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L T PG+ IR+ KNLR+C DCH K++S V+ RE+I+RD RFHHF+EG+CSC DYW
Sbjct: 374 GLLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREIIVRDGSRFHHFKEGKCSCLDYW 433
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + E F++MR+ + + + + C L G IH+ +
Sbjct: 32 MLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQLCLLEHGQSIHSIIDSLS 91
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T L+D+Y+ ++ LF+ +P+RD WNV+I + +DAL LF+
Sbjct: 92 LPMTISIGTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMICGLASHGLGKDALTLFE 151
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
E G P +VT + VL AC+ G ++ G + +++ +G +M ++ +
Sbjct: 152 RFLNE--GLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLG 209
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G + A +V + M D V W+ ++ ++G
Sbjct: 210 RAGLVFEAIKVIESMAISPDPVLWAMVLCACRIHG 244
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
++A +++ G + + ++F MPE+DV+SW+ M+ NG +A+E F M+ +G+ PD
Sbjct: 1 MLAGFARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPD 60
Query: 234 DQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYG-CVVDLLGRAGLLDQA 289
+ T +LSA + L++ G +D +S LP G ++D+ + G ++Q+
Sbjct: 61 EATLVTMLSASAQLCLLEHGQSIHSIIDSLS-----LPMTISIGTALLDMYAKCGCIEQS 115
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKH------VTLGERVI 325
L +M + D + W ++ C + H +TL ER +
Sbjct: 116 RLLFENMP-RRDVSTWNVMI--CGLASHGLGKDALTLFERFL 154
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/517 (39%), Positives = 289/517 (55%), Gaps = 26/517 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-----------RIPT-NPFACSFAIKCCMKFCSLMG 48
M+ ++ + E+ LF+++ IP +PF S+ C FC +G
Sbjct: 103 MISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLG 162
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
+ S + T L +Y + A +LFDE ++ +WN +IS +
Sbjct: 163 IVS------------HSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQ 210
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N T A+ LF + + + P+ VT +L ACA +GAL GE +H I + + S +
Sbjct: 211 NGLTDAAISLFQTMQK--NNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNV 268
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ +LI MY+KCGS+ +A E+F MPEK+ V+W+AMISG ++GHG++A++ F M +
Sbjct: 269 YVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSS 328
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
V P TF VL ACSH GLV EG M DFG P HY C+VD+LGRAG L +
Sbjct: 329 SVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKK 388
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A + I +M V+P +W LLGAC IHK L E L EL + G YVL+ N+YS
Sbjct: 389 ALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSV 448
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
+ + +R+ +K L TPGC+ I + V H F D SHP+ IY LD++ +
Sbjct: 449 ERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGK 508
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+ AG+ E T+ LH+L EEK + HSEKLAIAFG+++T PG IR+ KNLR+C+DC
Sbjct: 509 MTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDC 568
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
HN+ K LS + R +++RD RFHHF++G CSC DYW
Sbjct: 569 HNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI-KCCMKFCSLMGGLQIHARVLRD 59
M+ + +S E+ +F M P A+ + L G+QI ++
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ L+T L+ L+S + A LF EI ++D ++ N +IS + N T D++ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L SG + T + ++ + G IH + + G S ++ +L +Y
Sbjct: 121 KEL--LSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYC 178
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+ + A ++F EK + SW+AMISG NG AI F MQ+ V P+ T T
Sbjct: 179 RLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTS 238
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSAC+ G + G ++ + K N++ ++D+ + G + A +L M K
Sbjct: 239 ILSACAQIGALSLG-EWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297
Query: 300 PDSTIWRTLLGACRIHKH 317
+ T W ++ +H H
Sbjct: 298 NEVT-WNAMISGYGLHGH 314
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 290/506 (57%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
++ AY + E + + + + F + C + L G + A ++
Sbjct: 12 LIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAARQEE 71
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + T +DLY + +A +FDE+ RD VAW ++ Y N R+AL LF
Sbjct: 72 GVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLF 131
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G KPD T + L AC LGAL+ G + + L +LI MY+
Sbjct: 132 FAMQME--GAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYA 189
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGS A+ VF+ M E+D++ W+AMI GL M GH + A G M+++GV +D TF G
Sbjct: 190 KCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIG 249
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L +C+H GLV++G + M+ + I P I HYGC+VDL RAGLL++A+QLI M +
Sbjct: 250 LLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPML 309
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
++ +W LLG C+IH++ L E ++ LI L+ SG+YV+L N+YS+ G WE +LR
Sbjct: 310 ANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLR 369
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M KG++ P S + L G VH+F V D SHP ++IY LDE+ ++K GY
Sbjct: 370 LEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTE 429
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ ++ EEK N L +HSEK+AIAF ++ T PG TIRV KNLR+C DCH+ K++S +
Sbjct: 430 VVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHSAIKLISRIT 489
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH FR+G CSCNDYW
Sbjct: 490 CREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA---GVFPDDQTFTGVLSACSHCGLV 250
MP VSW+A+I+ GH A+E+ G +RA G+ PD T VL+AC+ +
Sbjct: 1 MPHPSTVSWTALIAAYMDAGH---ALEAIGVARRAFASGMRPDSFTAVRVLTACARVADL 57
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ G ++ G+ ++ +DL + G +++A + M + D+ W ++G
Sbjct: 58 ETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNR-DAVAWGAMVG 116
Query: 311 ACRIHKH 317
+ H
Sbjct: 117 GYASNGH 123
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ + + S + F LF+ M Q +P + + A++ C L G Q+HA + +
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D +L+ +Y+ +A LFDE+ +DTV+++ L+S Y++N R +A +F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +PD T + ++ AC+HL AL+ G H + G S+ ++CN+LI MY+
Sbjct: 430 KKM--QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + ++ +VF MP +D+VSW+ MI+G ++G G++A F M G PD TF
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLV EG + M +G+ P + HY C+VDLL R G LD+AY+ I SM ++
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +W LLGACR++K++ LG++V + EL + +G++VLL N+YS+ G +++ E+R
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVR 667
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+G + +PGCS I + G +H FV D SHP+ EIY+ LD I +K GY + +
Sbjct: 668 IIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 727
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L +L EEK AL HSEKLAIA+G+L+ TI V KNLR+C DCH K +S +
Sbjct: 728 FVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLK 787
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+ G+CSC D+W
Sbjct: 788 RRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 151/323 (46%), Gaps = 17/323 (5%)
Query: 1 MVRAYSMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
++RAYS SSSP +G +L+ +M + R+ N + FA+K C G IH +
Sbjct: 94 LIRAYS-SSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAI 152
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G Q D + T L+D+Y +A +F +P RD VAWN +++ Y + A+
Sbjct: 153 HAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVA 212
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI------SEHGYGSKMN-- 169
++ + +P+ T + +L A GAL G +H Y S SK+
Sbjct: 213 HLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDG 272
Query: 170 --LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
L +L+ MY+KCGSL A VF MP ++ V+WSA+I G + A F AM
Sbjct: 273 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLA 332
Query: 228 AGV-FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
G+ F + L AC+ + G ++K G+ ++ ++ + +AGL+
Sbjct: 333 QGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLI 391
Query: 287 DQAYQLITSMGVKPDSTIWRTLL 309
DQA L M VK D+ + L+
Sbjct: 392 DQAIALFDEMAVK-DTVSYSALV 413
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 24/245 (9%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTR--DALCLFDNLNREESGCKPDDVTCLLVL 140
A LFD+IP D +N LI Y + T D L L+ + R P++ T L
Sbjct: 75 RAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHR--VAPNNYTFPFAL 132
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+AC+ L G IHR+ G + + + +L+ MY KC L A +F MP +D+V
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVLSACSHCGLVDEGM---- 254
+W+AM++G A +G A+ +MQ + P+ T +L + G + +G
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 255 ------MFLDRMSKDF---GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+ +R SK G+L ++D+ + G L A ++ +M + + T W
Sbjct: 253 YRIRACLHSNRNSKSKLTDGVLLGT----ALLDMYAKCGSLLYARRVFDAMPARNEVT-W 307
Query: 306 RTLLG 310
L+G
Sbjct: 308 SALIG 312
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 303/505 (60%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + P + ++ +MR+ + + I+ C ++ G +H +LR G
Sbjct: 180 MVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHG 239
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D T+L+D+Y+ AC++F + R+ V+W+ +IS + +N ++ +AL LF
Sbjct: 240 MRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFR 299
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ + SG +PD + L AC+++G L+ G +H +I + L + I MYSK
Sbjct: 300 NM--QASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSK 356
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F + ++D++ W+AMI+ +G G+DA+ F M G+ PD TF +
Sbjct: 357 CGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASL 416
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV+EG ++ RM F I P HY C+VDLL R+GL+++A L+TSM +P
Sbjct: 417 LSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW LL C +K + LGE + ++++EL+ + G L+ NLY++ W+KV+++R+
Sbjct: 477 TVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRK 536
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G + PGCS+I ++G H FV++D SHP+ EI + +++ +++ GY+
Sbjct: 537 LMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEF 596
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H+L E K LSYHSE+LAIAFG+L T PGT + + KNLR+C DCH+ K +S + +
Sbjct: 597 VYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIAD 656
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 657 REIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S SP +F + P + + A+ C + L GG + R GY+ D
Sbjct: 84 HSRRGSPASALRVFRALPPAARP-DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ ++L+ LY+ + +A K+F +P+RD V W+ +++ ++ + DA+ ++ +
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-- 200
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G K D+V + V+QAC + G +H ++ HG + SL+ MY+K G L
Sbjct: 201 REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
+A VF M ++ VSWSAMISG A NG +A+ F MQ +G+ PD L AC
Sbjct: 261 DVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV-----VDLLGRAGLLDQAYQLITSMGVK 299
S+ G + G G + + C+ +D+ + G L A Q++ +M
Sbjct: 321 SNIGFLKLGRSV-------HGFIVRRFDFNCILGTAAIDMYSKCGSLASA-QMLFNMISD 372
Query: 300 PDSTIWRTLLGACRIH 315
D +W ++ C H
Sbjct: 373 RDLILWNAMIACCGAH 388
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+PD T L L ACA LG L GE + + GY + +C+SL+ +Y++ G++G A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-- 245
+VF MP +D V+WS M++G G DAI+ + M+ GV D+ GV+ AC+
Sbjct: 163 VKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222
Query: 246 ---------HCGLVDEGMM-----------------FLDRMSKDFGIL--PNIHHYGCVV 277
H L+ GM LD + FG++ N + ++
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282
Query: 278 DLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV 324
+ G D+A +L +M G++PDS + L AC + LG V
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 289/489 (59%), Gaps = 33/489 (6%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYS-----TFEK-SFE------------------- 83
G Q+HA++L G D + T+L+++YS TF + +F+
Sbjct: 79 GRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAK 138
Query: 84 ------ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR-EESGCKPDDVTC 136
A KLFD++P+++ ++W+ +I Y+ + AL LF +L E S +P++ T
Sbjct: 139 AGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTM 198
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-P 195
VL ACA LGAL+ G+ +H YI + G + L SLI MY+KCGS+ A +F + P
Sbjct: 199 SSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGP 258
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
EKDV++WSAMI+ +M+G + +E F M GV P+ TF VL AC H GLV EG
Sbjct: 259 EKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNE 318
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ RM ++G+ P I HYGC+VDL RAG ++ A+ ++ SM ++PD IW LL RIH
Sbjct: 319 YFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIH 378
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
V E I L+EL S YVLL N+Y+ +G W +V+ LR+ M +G++ PGCS
Sbjct: 379 GDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSL 438
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
+ + GV+ EF D SHP + +Y MLDEI K+L+ GY L +L E K ALS
Sbjct: 439 VEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALS 498
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLAIA+ L T PGTTIR+ KNLRIC DCH K++S +NRE+I+RD RFHHF+
Sbjct: 499 LHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFK 558
Query: 496 EGRCSCNDY 504
G CSC DY
Sbjct: 559 NGLCSCKDY 567
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ---KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+ Y + LF ++ ++ N F S + C + +L G +HA +
Sbjct: 163 MIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYID 222
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDAL 116
+ G ++D L T+L+D+Y+ A +FD + P++D +AW+ +I+ + + + + L
Sbjct: 223 KTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECL 282
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLI 175
LF + + G +P+ VT + VL AC H G + G E R ++E+G + ++
Sbjct: 283 ELFARMVND--GVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMV 340
Query: 176 AMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+YS+ G + A+ V K MP E DV+ W A+++G ++G
Sbjct: 341 DLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHG 379
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 296/538 (55%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E +F KM I + F + + C + G Q+HA +LR
Sbjct: 262 MISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTE 321
Query: 61 YQ--LDSQLMT--TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ LD L L LY K EA ++F+++P +D V+WN ++S Y+ R +A
Sbjct: 322 PRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAK 381
Query: 117 CLFDNL----------------------------NREES-GCKPDDVTCLLVLQACAHLG 147
F+ + NR +S G +P D + ACA L
Sbjct: 382 SFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLA 441
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
AL G ++H + G+ S ++ N+LI MY+KCG + A +F MP D VSW+AMI+
Sbjct: 442 ALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIA 501
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +GHG A+E F M + + PD TF VLS CSH GLV+EG + MS +GI
Sbjct: 502 ALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGIC 561
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P HY ++DLL RAG +A +I +M V+P IW LL CRIH ++ LG + E
Sbjct: 562 PGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAER 621
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L EL Q G YVLL N+Y++VG W+ V ++R+ M +KG++ PGCS I ++ VH F+V
Sbjct: 622 LFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLV 681
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
DD+ HP + +Y L+E+ +++ GY+ + LH++ +E+K LS HSEKLA+ FG+
Sbjct: 682 DDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGL 741
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L P G T+RV KNLRIC DCHN K +S V RE+++RD RFHHF+ G CSC +YW
Sbjct: 742 LKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 168/412 (40%), Gaps = 93/412 (22%)
Query: 43 FCSLMGGL-----------QIHARVLRDGYQLDSQLMTTLMDLY---------STFEKSF 82
F S++G L QIH V++ G + ++ L+ ++ S+
Sbjct: 152 FTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES--------------- 127
A KLFDE+ +RD ++W +I+ Y+RN A D + +
Sbjct: 212 AARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGF 271
Query: 128 --------------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI----SEHGYGSKMN 169
G + D+ T VL ACA+ G G+++H YI ++
Sbjct: 272 FLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLS 331
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA------------------------- 204
+ N+L +Y KCG + A +VF MP KD+VSW+A
Sbjct: 332 VNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERN 391
Query: 205 ------MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
MISGLA NG G ++++ F M+ G P D F G + AC+ + G
Sbjct: 392 LLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHA 451
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ + G ++ ++ + + G+++ A+ L +M DS W ++ A H H
Sbjct: 452 QLVR-LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL-DSVSWNAMIAALGQHGH- 508
Query: 319 TLGERVIEHLIELKAQES--GDYVLLLNLYSSVGDWEKVKE-LREFMNEKGL 367
G + +E L EL +E D + L + S+ V+E R F + GL
Sbjct: 509 --GAQALE-LFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGL 557
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 164/415 (39%), Gaps = 104/415 (25%)
Query: 23 QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF 82
Q+ P NP + S A +HA ++ G++ ++ L+D+Y
Sbjct: 21 QQCCPHNPMSYSIA-------------RTVHAHMIASGFKPRGYILNRLIDVYCKSSDLV 67
Query: 83 EACKLFDEIPQ---------------------------------RDTVAWNVLISCYIRN 109
A LFDEI Q RDTV +N +I+ Y N
Sbjct: 68 SAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHN 127
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKM 168
A+ LF +L R +G +PD+ T VL A A + E ++IH + + G G
Sbjct: 128 NDGFGAIELFRDLLR--NGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVT 185
Query: 169 NLCNSLIAMYSKCGS---------LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
++ N+L++++ KC S + A ++F M E+D +SW+ MI+G NG
Sbjct: 186 SVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGE----- 240
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
+D FLD M++ + N G V
Sbjct: 241 ------------------------------LDAARQFLDGMTEKLVVAWNAMISGYV--- 267
Query: 280 LGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
G +A ++ M G++ D + ++L AC G++V +++ + + S
Sbjct: 268 --HHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPS 325
Query: 337 GDYVLLLNLYSSVGDWE--KVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
D+ L +N + W+ KV E R+ N+ ++ + I L G V+ +D+
Sbjct: 326 LDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAI-LSGYVNAGRIDE 379
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/507 (39%), Positives = 308/507 (60%), Gaps = 6/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PT-NPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ ++ EE ++F+KM + + PT + FAC + C G+Q+H V++
Sbjct: 173 MIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFAC--VLSACANAVEFNLGVQVHGHVVK 230
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + +L+ Y+ K A K+F+E ++ V W L++ Y+ N + +DAL +
Sbjct: 231 LGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRV 290
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F ++ + G P+ T + L+AC L AL+ G++IH + G + + + NSL+ MY
Sbjct: 291 FGDMTK--MGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMY 348
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
++CG++ A VF+ + EKD+VSW+++I G A +G G A+ F M R GV P++ TFT
Sbjct: 349 TECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFT 408
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACS G++ +G F + +S+ + HY C+VD+LGR G LD+A +L+ M V
Sbjct: 409 GLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPV 468
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
K +S IW LL ACR+H ++ + ER +H+++L+ S YVLL N+Y+S G W V +
Sbjct: 469 KANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRM 528
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M + GL PG S + L+G HEF+ D SHP IY+ LD + K+LK GYV +
Sbjct: 529 RVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQ 588
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E+K LS+HSE+LAIAFG+++T G+TI V KNLR+C DCH+ K++S +
Sbjct: 589 KFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKI 648
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD RFHHF+ G CSC+DYW
Sbjct: 649 VGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF++M +K N + + + +KF G +++ R+ D + D ++ Y
Sbjct: 96 LFDEMPEK----NVISWTTMVNGYLKF----GRVELAQRLFLDMHVKDVAAWNAMVHGYF 147
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ E +LF+E+P RD ++W +I N ++ +AL +F + R SG +P T
Sbjct: 148 ENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLR--SGVEPTWSTF 205
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL ACA+ G ++H ++ + G + SLI Y+ C + A ++F
Sbjct: 206 ACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLT 265
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL--VDEGM 254
K+VV W+A+++ N +DA+ FG M + G P+ TF+ L AC CGL +D+G
Sbjct: 266 KNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKAC--CGLEALDKGK 323
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ M+ G+ ++ +V + G ++ A + ++ K D W +++
Sbjct: 324 E-IHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEK-DIVSWNSII 376
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
L T ++ Y+ ++ +A KLFD + RD V+WN +I + A LFD + +
Sbjct: 44 HLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK 103
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
+ ++ ++ G +E +++ ++ H + N+++ Y + G +
Sbjct: 104 ------NVISWTTMVNGYLKFGRVELAQRL--FLDMHV--KDVAAWNAMVHGYFENGRVE 153
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+F+ MP +DV+SW++MI GL +NG +A+ F M R+GV P TF VLSAC+
Sbjct: 154 EGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACA 213
Query: 246 H 246
+
Sbjct: 214 N 214
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
R I + ++L +IA Y++ L A ++F M +DVVSW++MI G G+
Sbjct: 32 RLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLG 91
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGC 275
A F M V ++T +++ G V+ +FLD KD + +
Sbjct: 92 MATRLFDEMPEKNVI----SWTTMVNGYLKFGRVELAQRLFLDMHVKD------VAAWNA 141
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+V G +++ +L M V+ D W +++G
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVR-DVISWTSMIGG 176
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/540 (37%), Positives = 316/540 (58%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR-VLRD 59
++R Y + +E + MR++ + F + K C + G QIH + +L
Sbjct: 117 LIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVG 176
Query: 60 GYQLDSQLMTTLMDLY----------------------------STFEKSFE---ACKLF 88
G+ D + +++D+Y S + KS A +LF
Sbjct: 177 GFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELF 236
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D +P +D VAW V++S + +N + R+A+ F+ + +E G + D++T + V+ ACA LGA
Sbjct: 237 DGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKM--QEFGVETDEITLIGVISACAQLGA 294
Query: 149 LEFGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
++ + I + +G K ++ ++LI MYSKCGS+G A+ VF+GM E++V S+S+MI
Sbjct: 295 AKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMI 354
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G AM+G DA++ F M + + P+ TF GVL+ACSH G+V++G + M K +GI
Sbjct: 355 LGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGI 414
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P+ HY C+VDLLGRAG L +A++L+ +M ++P +W LLGACRIHK +
Sbjct: 415 KPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAAN 474
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI-GLKGVVHEF 385
HL EL+ G+Y+LL N+Y+S G W V +R+ M +GL+ P S I KG+VHEF
Sbjct: 475 HLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEF 534
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
D++HPR EI Q L+++ +L+ GY ++S +++ E+K L HSEKLA+AF
Sbjct: 535 FSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAF 594
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+++T PG+ IR+ KNLRIC DCH+ S + RE+I+RD +RFHHF +G CSC ++W
Sbjct: 595 GLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 43/352 (12%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL--FDEIPQRDTVAWNVLISCYIR 108
Q+HAR+L +G ++ L+ + + L F+++ + +N LI Y+
Sbjct: 64 QVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYLI 123
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH-RYISEHGYGSK 167
+R +++ + + +E G P T + +AC + G +IH + I G+G
Sbjct: 124 EERLKESTEFYSLMRKE--GVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGED 181
Query: 168 MNLCNSLIAMYSKC-------------------------------GSLGMAFEVFKGMPE 196
+++ NS+I MY KC G++ A E+F G+P
Sbjct: 182 LHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPV 241
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
KD+V+W+ M+SG A N R+AI F MQ GV D+ T GV+SAC+ G
Sbjct: 242 KDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWI 301
Query: 257 LDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC--- 312
D K +FG ++ ++D+ + G + AY++ M + + +LG
Sbjct: 302 RDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHG 361
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
R+H + L + +++ E+K ++ +L S G E+ ++ E M +
Sbjct: 362 RVHDAMKLFDEMVK--TEIKPNRV-TFIGVLTACSHAGMVEQGWQIFELMEK 410
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 303/501 (60%), Gaps = 7/501 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS ++ L M + + N + S ++ C + +H ++++G
Sbjct: 85 MISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVR---MLHCGIIKEG 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+++ + +A +FDE+ D + WN +I + +N R+ AL LF
Sbjct: 142 LESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T VL+AC L LE G + H +I + Y + L N+L+ MY K
Sbjct: 202 RMKR--AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCK 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF M E+DV++WS MISGLA NG+ ++A++ F M+ +G P+ T GV
Sbjct: 258 CGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGV 317
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G + M K +GI P HYGC++DLLG+AG LD A +L+ M +P
Sbjct: 318 LFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEP 377
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ WRTLLGACR+ +++ L E + +I L +++G Y +L N+Y++ W+ V+E+R+
Sbjct: 378 DAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRK 437
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G++ PGCS I + +H F++ D SHP+I E+ + L+++ +L GYV E
Sbjct: 438 RMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNF 497
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L +L E+ ++L +HSEKLA+AFG++ P IR+ KNLRIC DCH F K+ S + N
Sbjct: 498 VLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLEN 557
Query: 481 REVIIRDRLRFHHFREGRCSC 501
R ++IRD +R+HHF++G+CSC
Sbjct: 558 RNIVIRDPIRYHHFQDGKCSC 578
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 15/278 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
IKCC+ ++ G I + +G+Q L+ L+++Y F +A +LFD++PQR+
Sbjct: 20 IKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 79
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
++W +IS Y + + + AL L + R+ G +P+ T VL+AC + + +H
Sbjct: 80 ISWTTMISAYSKCKIHQKALELLVLMLRD--GVRPNVYTYSSVLRACNGMSDVRM---LH 134
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I + G S + + ++LI +++K G A VF M D + W+++I G A N
Sbjct: 135 CGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 194
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHY 273
A+E F M+RAG + T T VL AC+ L++ GM + + + +D IL N
Sbjct: 195 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL-ILNN---- 249
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+VD+ + G L+ A ++ M + D W T++
Sbjct: 250 -ALVDMYCKCGSLEDARRVFNQMKER-DVITWSTMISG 285
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
+ G D T +++ C A+ G I R++ +G+ M L N LI MY K L
Sbjct: 5 QSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLL 64
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A ++F MP+++V+SW+ MIS + + A+E M R GV P+ T++ VL AC
Sbjct: 65 NDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRAC 124
Query: 245 S--------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ HCG++ EG+ +++ ++D+ + G + A + M
Sbjct: 125 NGMSDVRMLHCGIIKEGLE------------SDVYVRSALIDVFAKLGEPEDALSVFDEM 172
Query: 297 GVKPDSTIWRTLLGA 311
V D+ +W +++G
Sbjct: 173 -VTGDAIVWNSIIGG 186
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 305/506 (60%), Gaps = 19/506 (3%)
Query: 12 EEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E+ +F +M ++ + + F +K C +L G Q HA++ + G LD + +
Sbjct: 107 EQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNS 166
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ LY++ A K+F+++P R V+WNV+I Y+++ +AL LF + ++ +
Sbjct: 167 LIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEM---QNSFE 223
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN---LCNSLIAMYSKCGSLGMA 187
PD T ++ ACA +GAL G H Y+ G+ + +SL+ MYSKCGSL MA
Sbjct: 224 PDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMA 283
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSH 246
+VF+ MP+ D+ SW++MI LAM+G G+ A++ F + F P+ TF GVLSAC+H
Sbjct: 284 QQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNH 343
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
G+V +G + D M D+ I P + HYGC+VDLL R+G +D+A +L+ +M +KPD+ IWR
Sbjct: 344 GGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWR 403
Query: 307 TLLGAC-RIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
+LL AC + + V L E V +++ K SG YV+L +Y+S W V +R+ M +
Sbjct: 404 SLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTD 463
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV-----AEIT 419
G+ PGCS+I + G+ HEF D SHPRI EIY ++D I ++L+ GY A +
Sbjct: 464 MGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSPDCSQATMV 523
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
E N+ K +L HSE+LAIAFG+L PGT +R+ KNLR+C DCH K++S ++
Sbjct: 524 DEPDNI----KQQSLKLHSERLAIAFGLLNLKPGTPVRIFKNLRVCNDCHQVTKLISEIF 579
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
N E+I+RDR RFHHF+ G CSC D+W
Sbjct: 580 NVEIIMRDRNRFHHFKHGMCSCMDFW 605
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 9/287 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRN 109
QIHA+ +R+ +S L L+ + F+ AC++F++I ++ WN LI R+
Sbjct: 43 QIHAQAIRNFSTHNSSLFLYSRILHVSSLIDFDYACRVFNQIDNPNSFMWNTLIGACARS 102
Query: 110 -QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
R A+ +F + EE +PD T +L+ACA++ AL G + H I + G +
Sbjct: 103 LDRKEQAIEIFYRM-LEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDV 161
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ NSLI +Y+ CG L MA +VF+ MP + +VSW+ MI +G +A++ F MQ +
Sbjct: 162 YVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQNS 221
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
PD T ++SAC+ G + GM ++ R + + ++ +VD+ + G
Sbjct: 222 -FEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASG-AMAGDVLINSSLVDMYSKCGS 279
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
L A Q+ +M K D W +++ A +H + L+E++
Sbjct: 280 LRMAQQVFETMP-KHDLNSWNSMILALAMHGRGQAALQCFSRLVEME 325
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 301/505 (59%), Gaps = 4/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS S E LF KM N F S +K S G Q+HA L+ G
Sbjct: 177 LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYG 236
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y ++ + ++L+D+Y+ + EA +F+ + ++ V+WN LI+ + R + LF
Sbjct: 237 YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFX 296
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G +P T VL ACA G+LE G+ +H ++ + G + N+LI MY+K
Sbjct: 297 QMLRQ--GFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAK 353
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF+ + ++D+VSW+++ISG A +G G +A++ F M +A V P++ TF V
Sbjct: 354 SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSV 413
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL+DEG + + M K I + H+ VVDLLGRAG L++A + I M +KP
Sbjct: 414 LTACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKP 472
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGACR+HK++ LG E + EL +SG +VLL N+Y+S G ++R+
Sbjct: 473 TAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRK 532
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E G++ P CS + ++ VH FV +D SHP EI +M ++I+ ++K GYV + +
Sbjct: 533 MMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSH 592
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + +++ L YHSEKLA+AF VL TPPG TIR+ KN+RIC DCH+ K S V
Sbjct: 593 VLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLG 652
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF G CSC DYW
Sbjct: 653 REIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 177/369 (47%), Gaps = 18/369 (4%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C L G IHA + ++ D L+ ++++Y+ EA LFD++P +D V+W
Sbjct: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
VLIS Y ++ + +AL LF + G +P++ T +L+A + G ++H +
Sbjct: 175 TVLISGYSQSGQASEALALFPKM--LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFS 232
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
++GY +++ +SL+ MY++ + A +F + K+VVSW+A+I+G A G G +
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M R G P T++ VL AC+ G +++G + K G P + ++D+
Sbjct: 293 RLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDM 350
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-D 338
++G + A ++ + VK D W +++ H ++ E +++ K Q +
Sbjct: 351 YAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV--SHPRIN 396
++ +L S G ++ + E M + ++ V H V D+ R+N
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ----------VAHHVTVVDLLGRAGRLN 459
Query: 397 EIYQMLDEI 405
E + ++E+
Sbjct: 460 EANKFIEEM 468
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+P+ +L C +L L+ G IH +I + + L N ++ MY+KCGSL A +
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F MP KD+VSW+ +ISG + +G +A+ F M G P++ T + +L A S G
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGP 220
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
D L S +G N+H ++D+ R + +A + S+ K + W L+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALI 279
Query: 310 GACRIHKHVTLGERVIEHLIELKAQ 334
H GE EH++ L Q
Sbjct: 280 AG-----HARKGEG--EHVMRLFXQ 297
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/456 (41%), Positives = 286/456 (62%), Gaps = 4/456 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+IH +R G D L T++D+Y A ++F+ I +D V+W +ISCY+ N
Sbjct: 383 EIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNG 441
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
AL +F ++ +E+G +PD VT + +L A L L+ G++IH +I G+ + ++
Sbjct: 442 LANKALEVFSSM--KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSI 499
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+L+ MY++CGS+ A+++F ++++ W+AMIS M+G+G A+E F M+ +
Sbjct: 500 SNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKI 559
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD TF +L ACSH GLV+EG FL+ M ++ + P HY C+VDLLGR L++AY
Sbjct: 560 IPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAY 619
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
Q++ SM +P +W LLGACRIH + +GE E L+EL G+YVL+ N++++ G
Sbjct: 620 QIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANG 679
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
W+ V+E+R M GL PGCS I + +H F+ D HP ++IYQ L ++ ++LK
Sbjct: 680 RWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLK 739
Query: 411 I-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
GYVA+ LHN+G EEK L HSE+LAIA+G+LAT GT IRV KNLR+C DCH
Sbjct: 740 REGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCH 799
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+F ++S + RE+I+RD RFHHF++G CSC D+W
Sbjct: 800 SFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 22/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS + E LF +M + + TN + + A++ C + G+QIHA +L+ G
Sbjct: 131 IISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSG 190
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD + L+ +Y F K EA +F + +D V WN +++ +I+N +AL F
Sbjct: 191 RVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFY 250
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+L + + KPD V+ + ++ A LG L G++IH Y ++G+ S + + N+LI MY+K
Sbjct: 251 DL--QNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAK 308
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + F M KD++SW+ +G A N A+E +Q G+ D +
Sbjct: 309 CCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSI 368
Query: 241 LSACS--HC-GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
L AC +C G + E + R +L N ++D+ G G++D A ++ S+
Sbjct: 369 LLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNT-----IIDVYGECGIIDYAVRIFESIE 423
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYSSV---GD 351
K D W +++ +C +H L + +E +K E+G DYV L+++ S+V
Sbjct: 424 CK-DVVSWTSMI-SCYVHN--GLANKALEVFSSMK--ETGLEPDYVTLVSILSAVCSLST 477
Query: 352 WEKVKELREFMNEKGL 367
+K KE+ F+ KG
Sbjct: 478 LKKGKEIHGFIIRKGF 493
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 3/254 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + ++ +MR + + + +K C L G +IH ++ G
Sbjct: 29 MMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG 88
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRNQRTRDALCLF 119
++ +L+ LY+ A KLFD + R D V+WN +IS Y N +ALCLF
Sbjct: 89 CDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLF 148
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +G + T LQAC ++ G +IH I + G + + N+L+AMY
Sbjct: 149 SEMLK--AGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYV 206
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+ G + A +F + KD+V+W++M++G NG +A+E F +Q A + PD +
Sbjct: 207 RFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIIS 266
Query: 240 VLSACSHCGLVDEG 253
++ A G + G
Sbjct: 267 IIVASGRLGYLLNG 280
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 5/237 (2%)
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+Y +A +FD++ +R WN ++ Y+ N AL ++ + G D
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREM--RHLGVSFDS 58
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
T ++L+AC + L G +IH ++G S + + NSL+A+Y+KC + A ++F
Sbjct: 59 YTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDR 118
Query: 194 M-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M DVVSW+++IS + NG +A+ F M +AGV + TF L AC +
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
GM + K G + +++ +V + R G + +A + ++ K D W ++L
Sbjct: 179 GMQIHAAILKS-GRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK-DIVTWNSML 233
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGS+ A +F M E+ + +W+AM+ G NG A+E + M+ GV D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 237 FTGVLSACSHCGLVDEGMMF----LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
F +L A CG+V++ +F + ++ +G + +V L + ++ A +L
Sbjct: 61 FPVLLKA---CGIVED--LFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKL 115
Query: 293 ITSMGVKPDSTIWRTLLGA 311
M V+ D W +++ A
Sbjct: 116 FDRMYVRNDVVSWNSIISA 134
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F M++ + + + +L G +IH ++R G
Sbjct: 433 MISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKG 492
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+ + TL+D+Y+ +A K+F R+ + W +IS Y + A+ LF
Sbjct: 493 FILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFM 552
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
+ E+ PD +T L +L AC+H G + G+
Sbjct: 553 RMKDEK--IIPDHITFLALLYACSHSGLVNEGK 583
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/515 (38%), Positives = 292/515 (56%), Gaps = 10/515 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E +F +M+ + N + + C +L+ G Q HA V+++
Sbjct: 341 VIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNI 400
Query: 61 YQL-------DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD--TVAWNVLISCYIRNQR 111
L D ++ L+D+Y+ + A +FD I +D V W V+I Y ++
Sbjct: 401 LNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGE 460
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNL 170
DAL LF + ++++ KP+ T L ACA LG L G ++H Y + + +
Sbjct: 461 ANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYV 520
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N LI MYSK G + A VF M ++VVSW+++++G M+G G +A+ F MQ+ G
Sbjct: 521 GNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGF 580
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D TF VL ACSH G+VD+GM++ M K FGI P HY C+VDLLGRAG L++A
Sbjct: 581 AVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAM 640
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
+LI +M ++P + +W LL A RIH ++ LGE L EL A+ G Y LL NLY++
Sbjct: 641 ELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANAR 700
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
W+ V +R M G++ PGCS I K F V D SHP +IY +L ++ K++K
Sbjct: 701 RWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIK 760
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GYV + + LH++ EEKG+ L HSEKLA+A+G+L T PG IR+ KNLRIC DCH+
Sbjct: 761 DMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHS 820
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + + E+++RD RFHHF++G CSC YW
Sbjct: 821 ALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
GFY + R +P + + F +K C + SL G +HA V +G + + +++
Sbjct: 113 GFYC-QMQRLGWLP-DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVA 170
Query: 74 LYSTFEKSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCL-FDNLNREESGC 129
+Y +A ++FDE+ +R D V+WN +++ Y++ ++R AL + F N
Sbjct: 171 MYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKL 230
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD +T + +L ACA + AL+ G+++H + +G + + N+L++MY+KC + A +
Sbjct: 231 RPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANK 290
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF+G+ +KDVVSW+AM++G + G A+ F MQ + D T++ V++ + G
Sbjct: 291 VFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKG- 349
Query: 250 VDEGMMFLD--RMSKDFGILPNI 270
G LD R + +G+ PN+
Sbjct: 350 --HGFEALDVFRQMQLYGLEPNV 370
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 11/185 (5%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P + + +L+ C L + H+ I HG+ + + Y +CG+ A +
Sbjct: 28 PPTIPLISLLRQCKTLINAKLA---HQQIFVHGFTEMFSYA---VGAYIECGASAEAVSL 81
Query: 191 FKGM--PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+ + V W+A+I G D + + MQR G PD TF VL AC
Sbjct: 82 LQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIP 141
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP--DSTIWR 306
+ G + + G+ N+ +V + GR G LD A+Q+ + + D W
Sbjct: 142 SLRHGASVHAIVCAN-GLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWN 200
Query: 307 TLLGA 311
++L A
Sbjct: 201 SILAA 205
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 306/541 (56%), Gaps = 39/541 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ YS E +F KM + + + F + + C L G QIHA +LR
Sbjct: 245 MISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 60 GYQ---------------------------------LDSQLMTTLMDLYSTFEKSFEACK 86
+ L+ T+L+D Y+ A +
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F+++ RD VAW +I Y++N DAL LF + E G +P+ T +L + L
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNE--GPEPNSYTLAAMLSVSSSL 422
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSA 204
LE G++IH + G S ++ N+LIAMY+K G++ +A VF +P +K++VSW++
Sbjct: 423 TILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTS 481
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
MI LA +G G++AI F M G+ PD T+ GVLSAC+H GLV++G + + M++
Sbjct: 482 MIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
I P + HY C++DL GRAGLL +AY I SM ++PD+ W +LL +C+IHK+ L +
Sbjct: 542 EIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVA 601
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
E L+ + SG Y+ L N+YS+ G WE + R+ M ++G++ G S I +K VH
Sbjct: 602 AERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHA 661
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F V+DV HP+ +EIY+++ EI +++K G++ + S LH+L E K L YHSEKLAIA
Sbjct: 662 FGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIA 721
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+L TP T +R+ KNLR+C DCH+ K +S + RE+I+RD RFHHF++G CSC DY
Sbjct: 722 FGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDY 781
Query: 505 W 505
W
Sbjct: 782 W 782
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 61/288 (21%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT+ + ++ ++ G +H ++++ G L LM LM Y+ A
Sbjct: 7 PTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHH 66
Query: 87 LFDEIPQRDTVAWNVLISCYIRN---QRTR---------------------DALCLFDNL 122
+FDE+P + T +WN LIS Y + + +R + LFDN
Sbjct: 67 VFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNA 126
Query: 123 -----NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
P T VL +CA L+ G KIH ++ + G GS + + SL+ M
Sbjct: 127 IWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186
Query: 178 YSKCGSLGMA---------------------------FEV----FKGMPEKDVVSWSAMI 206
Y+KCG +A FE+ F+ MP++D+VSW++MI
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMI 246
Query: 207 SGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEG 253
SG + G+ +A+ F M + PD+ T +LSAC++ ++ G
Sbjct: 247 SGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 295/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E F++M+ I + + AI C ++ G QIHARV G
Sbjct: 417 MIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSG 476
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + L+ LY+ S EA F+ I ++ + WN LIS + ++ +AL +F
Sbjct: 477 YSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVF- 535
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +++G K + T + + A A+L ++ G++IH + + GY S+ + N+LI++Y K
Sbjct: 536 -MKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGK 594
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F M +++ VSW+ +I+ + +G G +A++ F M++ G+ P D TF GV
Sbjct: 595 CGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGV 654
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV+EG+ + MS + GI P HY CVVD+LGRAG LD+A + + M +
Sbjct: 655 LTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPA 714
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS +WRTLL AC++HK++ +GE +HL+EL+ +S YVLL N Y+ G W ++R+
Sbjct: 715 DSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRK 774
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I +K VVH F V D HP ++IY L +N +L GY E
Sbjct: 775 IMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYH 834
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H E K HSEKLA+AFG+++ P +RV KNLR+C DCH + K SGV
Sbjct: 835 LFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMG 894
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 895 REIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+F++M+ + + + + C L G Q+H+ +L+ G LD + +L+DLY
Sbjct: 231 IFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYV 290
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE-ESGCKPDDVT 135
EA ++FD + + V WN+++ Y + D FD R +G +P+ T
Sbjct: 291 KSGDIEEALQIFDSGDRTNVVLWNLMLVAY---GQIDDLAKSFDIFYRMLAAGVRPNKFT 347
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+L+ C H G + GE+IH ++G+ S M + LI MYSK G L A + +
Sbjct: 348 YPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE 407
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
EKDVVSW++MI+G + ++A+E+F MQ G++PD+ +SAC+ V +G
Sbjct: 408 EKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ 467
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
R+ G ++ + +V L R G+ +A+ ++ K T W L+
Sbjct: 468 IHARVYVS-GYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGIT-WNGLI 519
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 48/355 (13%)
Query: 51 QIHARVL---RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
+IHA+ + GY++ L L+DLY+ A ++F+E+ RD V+W ++S Y
Sbjct: 63 EIHAKAIICGLSGYRIIGNL---LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYA 119
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+N +A+ L+ ++R SG P +L AC + G IH + + G+ S+
Sbjct: 120 QNGLGEEAVRLYREMHR--SGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ N+LI++Y +C S +A VF M D V+++ +ISG A GHG A+ F MQ
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+G+ PD T +L+ACS G + +G + K L I G ++DL ++G ++
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME-GSLLDLYVKSGDIE 296
Query: 288 QAYQLITS----------------------------------MGVKPDSTIWRTLLGACR 313
+A Q+ S GV+P+ + +L C
Sbjct: 297 EALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCT 356
Query: 314 IHKHVTLGERVIEHLIELKAQESGD-YV--LLLNLYSSVGDWEKVKELREFMNEK 365
+ LGE++ H + +K D YV +L+++YS G +K + + + + EK
Sbjct: 357 HTGEIGLGEQI--HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEK 409
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 4/316 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + EE L+ +M + + P+ S + C K G IH +V + G
Sbjct: 114 VLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQG 173
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + L+ LY A ++F ++ D+V +N LIS + + AL +FD
Sbjct: 174 FFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFD 233
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG PD VT +L AC+ +G L G+++H Y+ + G + SL+ +Y K
Sbjct: 234 EM--QLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVK 291
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A ++F +VV W+ M+ + + F M AGV P+ T+ +
Sbjct: 292 SGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCM 351
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C+H G + G K+ G +++ G ++D+ + G LD+A Q I M +
Sbjct: 352 LRTCTHTGEIGLGEQIHSLTIKN-GFQSDMYVSGVLIDMYSKYGWLDKA-QRILDMIEEK 409
Query: 301 DSTIWRTLLGACRIHK 316
D W +++ H+
Sbjct: 410 DVVSWTSMIAGYVQHE 425
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 31/273 (11%)
Query: 121 NLNREESG-CKPDDVTCLLVLQA--CAH---LGALEFG----------------EKIHRY 158
+ NR +G PDD LL L A C LGA++F +IH
Sbjct: 8 SFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAK 67
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
G + N LI +Y+K G + A VF+ + +D VSW A++SG A NG G +A
Sbjct: 68 AIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEA 127
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ + M R+GV P + +LSAC+ L G + ++ K G ++
Sbjct: 128 VRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQ-GFFSETFVGNALIS 186
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK----AQ 334
L R A ++ M + DS + TL+ H G+R + E++ +
Sbjct: 187 LYLRCRSFRLADRVFCDM-LYCDSVTFNTLISG---HAQCGHGDRALGIFDEMQLSGLSP 242
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+S LL S+VGD K K+L ++ + G+
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGM 275
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 292/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E G +LF +M + + F ++ C + G Q+HA VL+ GY+ + + ++L
Sbjct: 71 ENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSL 130
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y E K+ + R+ VAWN LI+ +N L L++ + SG +P
Sbjct: 131 AHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKM--SGLRP 188
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +T + V+ + A L L G++IH + G S + + +SLI+MYSKCG L + +
Sbjct: 189 DKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKAL 248
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
D V WS+MI+ +G G +A+ F M++ G+ +D TF +L ACSH GL +
Sbjct: 249 LDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKE 308
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+GM F M + +G+ P + HY CVVDLLGR+G LD+A +I SM ++ D IW+TLL A
Sbjct: 309 KGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIH++ + R E ++ L Q+S YVLL N+++S W+ V ++R M ++ ++ P
Sbjct: 369 CRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEP 428
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + +K V +F + D SHP EI L E+ +++K+ GYV + + H+ +EEK
Sbjct: 429 GVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKE 488
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
N+L HSEKLAIAFG++ PPG+ IRV KNLRIC DCH K++S + NRE+I+RD RF
Sbjct: 489 NSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRF 548
Query: 492 HHFREGRCSCNDYW 505
HHF+ G+CSC DYW
Sbjct: 549 HHFKHGKCSCGDYW 562
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 10/264 (3%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FDE+ +R+ WN ++S I+ + + L LF ++ E G PD+ T VL+ C
Sbjct: 42 AIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH--ELGFLPDEFTLGSVLRGC 99
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L A G+++H Y+ ++GY + + +SL MY K GSLG +V K M ++VV+W+
Sbjct: 100 AGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWN 159
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+I+G A NGH ++ + M+ +G+ PD T V+S+ + + +G K
Sbjct: 160 TLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKA 219
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G + ++ + + G L+ + + + PDS +W +++ A H GE
Sbjct: 220 -GANSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSVLWSSMIAAYGFHGR---GEE 274
Query: 324 VIEHLIELKAQE--SGDYVLLLNL 345
+ HL E QE G+ V L+L
Sbjct: 275 AV-HLFEQMEQEGLGGNDVTFLSL 297
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N LI + + G L A +VF M E++V +W+AM+SGL + + F M G
Sbjct: 27 NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ T VL C+ G + K +G N+ + + ++G L + +
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLK-YGYEFNLVVGSSLAHMYMKSGSLGEGEK 145
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKH 317
+I +M ++ + W TL+ + H
Sbjct: 146 VIKAMRIR-NVVAWNTLIAGNAQNGH 170
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY K G + A F MP ++++S + +I+G +G AI+ F M V +
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL-----DQAYQ 291
+G++ +E +FL R + G LP+ G V L G AGL Q +
Sbjct: 61 VSGLIQF-----EFNENGLFLFREMHELGFLPDEFTLGSV--LRGCAGLRASYAGKQVHA 113
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
+ G + + + +L + GE+VI+ ++ + + L+ + G
Sbjct: 114 YVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK---AMRIRNVVAWNTLIAGNAQNGH 170
Query: 352 WEKVKELREFMNEKGLQ 368
+E V +L M GL+
Sbjct: 171 FEGVLDLYNMMKMSGLR 187
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 297/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + E +F +MR + F + C +L G QIHA V+R
Sbjct: 241 MITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + + L+D+YS A +F +PQ++ ++W ++ Y +N + +A+ +F
Sbjct: 301 HKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFF 360
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G +PDD T V+ +CA+L +LE G + H G S + + N+LI +Y K
Sbjct: 361 EMQR--NGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGK 418
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS + +F M +D VSW+A+++G A G + I F M G+ PD TF GV
Sbjct: 419 CGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGV 478
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS GLV++G+ + + M K+ GI+P + H C++DLLGRAG L++A I +M P
Sbjct: 479 LSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHP 538
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D W TLL +CR+H + +G+ + LI L+ Q YVLL +LY+S G W+KV +LR
Sbjct: 539 DVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRR 598
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +K ++ PG S I KG VH F DD S P + +IY L+++N ++ GYV +++S
Sbjct: 599 GMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSS 658
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EK L++HSEKLAIAFG++ PPG IRV KNLR+C DCHN K +S +
Sbjct: 659 VLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQ 718
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD +RFH F++G CSC D+W
Sbjct: 719 REILVRDAVRFHLFKDGTCSCGDFW 743
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 171/342 (50%), Gaps = 39/342 (11%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
++ + N S + C KF + G QI+ ++L+ G+ D + + L+D+Y+
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 81 SFEACKLFDEIP-------------------------------QRDTVAWNVLISCYIRN 109
++A + FDE+P +RD+++W ++I+ ++N
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
R+AL +F + +G D T VL AC L AL G++IH Y+ + +
Sbjct: 249 GLEREALDMFREMRL--AGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVF 306
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++L+ MYSKC S+ A VFK MP+K+V+SW+AM+ G NG +A++ F MQR G
Sbjct: 307 VGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG 366
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V PDD T V+S+C++ ++EG F R G++ I ++ L G+ G + +
Sbjct: 367 VEPDDFTLGSVISSCANLASLEEGAQFHCRALVS-GLISFITVSNALITLYGKCGSTENS 425
Query: 290 YQLITSMGVKPDSTIWRTLLGAC----RIHKHVTLGERVIEH 327
++L T M ++ D W LL + ++ + L ER++ H
Sbjct: 426 HRLFTEMNIR-DEVSWTALLAGYAQFGKANETIGLFERMLAH 466
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 32/216 (14%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ +YS + ++F+ +P RD V+WN+ IS Y DA+ ++ L +++
Sbjct: 75 NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY-KLMLKDAA 133
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK-------- 180
+ +T +L C+ ++ G +I+ I + G+GS + + + L+ MY+K
Sbjct: 134 MNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAK 193
Query: 181 -----------------------CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
CG + + +F G+ E+D +SW+ MI+GL NG R+
Sbjct: 194 RYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLERE 253
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
A++ F M+ AG D TF VL+AC + EG
Sbjct: 254 ALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEG 289
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+P+ ++ A LG L + + +I + S N+++++YSK G L +
Sbjct: 37 QPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFS----WNTILSVYSKLGLLSQMQQ 92
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCG 248
+F MP +D VSW+ ISG A G DA+ + M + A + + TF+ +L CS
Sbjct: 93 IFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFR 152
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
VD G ++ K FG ++ +VD+ + GL+ A + M
Sbjct: 153 CVDLGRQINGQILK-FGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 302/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S +EG F+ M+ +R P + + + + G IH V++ G
Sbjct: 394 LINGYTQSGYYKEGLESFKMMKMERKP-DSVTFVLLLSIFSQLADINQGRGIHCDVIKFG 452
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + +L+D+Y+ + + K+F + D ++WN +I+ + + +
Sbjct: 453 FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMIN 512
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G PD+ T L +L C+ L G++IH YI + G+ S + + N+LI MYSK
Sbjct: 513 EMRTE--GLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL +VFK M EKDVV+W+A+IS M G G+ A+++F M+ +GV PD F
Sbjct: 571 CGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAF 630
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ ACSH G+V EG+ F DRM D+ + P + HY CVVDLL R+GLL QA + I SM +KP
Sbjct: 631 IFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKP 690
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+++W LL ACR + + +RV + ++EL + ++G YVL+ N+Y+++G W++VK +R
Sbjct: 691 DASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRN 750
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KGL+ PG S I ++ V+ F D S + +++ +L+ + + + GYVA++
Sbjct: 751 SMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQF 810
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ ++K + L HSE+LAIAFG+L T PG+ + V KNLR+C DCH K ++ +
Sbjct: 811 ALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQ 870
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC D+W
Sbjct: 871 REILVRDANRFHRFKDGACSCGDHW 895
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 5/351 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA + + + + +MR+K++ + F I C + L G +H + G
Sbjct: 92 IIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMG 151
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+D+YS F A +F+E+ RD+V+WN LIS Y N DAL ++
Sbjct: 152 FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYH 211
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+G PD T VL AC L A++ G +H I + G + + N L++MY K
Sbjct: 212 KFRM--TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFK 269
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A VF M KD V+W+ MI G A G +++ F M G PD + T
Sbjct: 270 FERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITST 328
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC G + G F+ + G + ++D+ + G L A ++ + K
Sbjct: 329 IRACGQSGDLQVG-KFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK- 386
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
DS W +L+ + G + + + +S +VLLL+++S + D
Sbjct: 387 DSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLAD 437
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 158/328 (48%), Gaps = 6/328 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + E+ ++ K R + + F S + C ++ G+ +H + + G
Sbjct: 193 LISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIG 252
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+ +Y FE+ EA ++F ++ +D+V WN +I Y + R ++ LF
Sbjct: 253 IAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFM 312
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ G PD ++ ++AC G L+ G+ +H+Y+ G+ CN LI MY+K
Sbjct: 313 DMI---DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK 369
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A EVF KD V+W+++I+G +G+ ++ +ESF M+ PD TF +
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLL 428
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS S +++G + K FG + ++D+ + G +D ++ + M
Sbjct: 429 LSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH- 486
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHL 328
D W T++ + T+G ++I +
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEM 514
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQ 110
+H+ ++ G L L+ Y+ + + +F I P + WN +I N
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
AL + + E +PD T V+ +CA + LE G +H + E G+ S + +
Sbjct: 101 LFTQALGYYTEM--REKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+LI MYS+ L A VF+ M +D VSW+++ISG NG DA++ + + G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD T + VL AC V EG+ + K GI ++ ++ + + L +A
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEK-IGIAGDVIIGNGLLSMYFKFERLREAR 277
Query: 291 QLITSMGVKPDSTIWRTLL-GACRIHKH 317
++ + M VK DS W T++ G ++ +H
Sbjct: 278 RVFSKMAVK-DSVTWNTMICGYAQLGRH 304
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/508 (38%), Positives = 299/508 (58%), Gaps = 16/508 (3%)
Query: 14 GFYLFEK-MRQKRIPTNPFACSFAIK-CCMKFCSLMGGLQIHARVLRD-GYQLDSQLMTT 70
F L+ K + K + N F K CC G +H VL+ D+ + +
Sbjct: 233 AFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQAS 292
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN------- 123
L++ Y+ + K + +FD I + D WNV+++ Y R+ FD+ +
Sbjct: 293 LLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLY 352
Query: 124 ----REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ G +P++VT + ++ AC++LGA+ G +H ++ + + + + MYS
Sbjct: 353 LFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYS 412
Query: 180 KCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
KCG L +A +VF MPE +D ++AMI G A++G+G A+E + M+ G+ PD TF
Sbjct: 413 KCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATF 472
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+ ACSH GLV+EG+ M + G+ P + HYGC++DLLGRAG L +A + + M
Sbjct: 473 VVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMP 532
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KP++ +WR+LLGA RIH ++ +GE + LIEL+ + SG+YVLL N+Y+SVG VK
Sbjct: 533 MKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKR 592
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ M G+ PG S + +KG +HEF+ D SHP EIY + EIN +L+ G+ A
Sbjct: 593 VRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKAR 652
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L +L E+K LSYHSE+LAIAF ++A+P IR+ KNLR+C DCH F K++S
Sbjct: 653 TSEALFDLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISV 712
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
Y+RE+I+RDR RFHHF++G CSC DYW
Sbjct: 713 AYHREIIVRDRNRFHHFKDGSCSCLDYW 740
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E YLF M+ I N I C ++ G +H VLR+ +++ + T +
Sbjct: 349 ESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFV 408
Query: 73 DLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
D+YS AC++FD++P+ RD+ + +I + + AL L+ + + G
Sbjct: 409 DMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFK--GLV 466
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
PD T ++ + AC+H+G +E G +I + + E HG K+ LI + + G L A E
Sbjct: 467 PDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEE 526
Query: 190 VFKGMPEK-DVVSWSAMISGLAMNGH 214
MP K + V W +++ ++G+
Sbjct: 527 WLADMPMKPNAVLWRSLLGAARIHGN 552
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 306/541 (56%), Gaps = 39/541 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ YS E +F KM + + + F + + C L G QIHA +LR
Sbjct: 245 MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 60 GYQ---------------------------------LDSQLMTTLMDLYSTFEKSFEACK 86
+ L+ T+L+D Y+ A +
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F+++ RD VAW +I Y++N DAL LF + E G +P+ T +L + L
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNE--GPEPNSYTLAAMLSVSSSL 422
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSA 204
LE G++IH + G S ++ N+LIAMY+K G++ +A VF +P +K++VSW++
Sbjct: 423 TILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTS 481
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
MI LA +G G++AI F M G+ PD T+ GVLSAC+H GLV++G + + M++
Sbjct: 482 MIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
I P + HY C++DL GRAGLL +AY I SM ++PD+ W +LL +C+IHK+ L +
Sbjct: 542 EIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVA 601
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
E L+ + SG Y+ L N+YS+ G WE + R+ M ++G++ G S I +K VH
Sbjct: 602 AERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHA 661
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F V+DV HP+ +EIY+++ EI +++K G++ + S LH+L E K L YHSEKLAIA
Sbjct: 662 FGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIA 721
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+L TP T +R+ KNLR+C DCH+ K +S + RE+I+RD RFHHF++G CSC DY
Sbjct: 722 FGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDY 781
Query: 505 W 505
W
Sbjct: 782 W 782
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 61/288 (21%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT+ + ++ ++ G +H ++++ G L LM LM Y+ A
Sbjct: 7 PTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHH 66
Query: 87 LFDEIPQRDTVAWNVLISCYIRN---QRTR---------------------DALCLFDNL 122
+FDE+P + T +WN LIS Y + + +R + LFDN
Sbjct: 67 VFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNA 126
Query: 123 -----NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
P T VL +CA L+ G KIH ++ + G GS + + SL+ M
Sbjct: 127 IWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186
Query: 178 YSKCGSLGMA---------------------------FEV----FKGMPEKDVVSWSAMI 206
Y+KCG +A FE+ F+ MP++D+VSW++MI
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMI 246
Query: 207 SGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEG 253
SG + G+ +A+ F M + PD+ T +LSAC++ ++ G
Sbjct: 247 SGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 299/504 (59%), Gaps = 17/504 (3%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L KM N S A+ L G QIH +VL+ G D + +L+D+Y
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566
Query: 77 TFEKSFEACKLFDEIPQR---------------DTVAWNVLISCYIRNQRTRDALCLFDN 121
+ +A +F +PQ ++V+W+ ++S Y++N R DAL F
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSF 626
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ + + D T V+ ACA G LE G ++H YI + G+G + L +S+I MY KC
Sbjct: 627 MICSQ--VEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
GSL A+ +F +++VV W++MISG A++G GR+A+ F M G+ P++ +F GVL
Sbjct: 685 GSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVL 744
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+ACSH GL++EG + M + +GI P H+ C+VDL GRAG L++ + I + +
Sbjct: 745 TACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKL 804
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
S++WR+ L +CR+HK++ +G V + L+EL+ ++G Y+L ++ ++ WE+ ++R
Sbjct: 805 SSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSL 864
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M ++G++ P S I LK VH FV+ D SHP+ +IY LDE+ +LK GY ++T
Sbjct: 865 MQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPV 924
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNR 481
+ ++ E++ L YHSEKLAIA+G+++T PGT IRV KNLR+C+DCHNF K S + R
Sbjct: 925 MQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGR 984
Query: 482 EVIIRDRLRFHHFREGRCSCNDYW 505
E+IIRD RFHHF+ G CSC DYW
Sbjct: 985 EIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 47/358 (13%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCS-LMGGLQIHARVLRDGYQLDSQLMTTLMDLY 75
LF KM+ + + N F S +K C + G IH +LR+G LD+ L +++D Y
Sbjct: 374 LFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYY 433
Query: 76 STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES-------- 127
A KLF + ++DTV+WN+++S Y++ + ++ LF L +++
Sbjct: 434 VKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMID 493
Query: 128 -----GCKP----------------DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
GC+ + +T + L + L L G++IH + + G
Sbjct: 494 GLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLD 553
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK---------------DVVSWSAMISGLAM 211
+ NSLI MY KCG + A +FK +P++ + VSWS+M+SG
Sbjct: 554 DGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQ 613
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
NG DA+++F M + V D T T V+SAC+ G+++ G + K G ++
Sbjct: 614 NGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK-IGHGLDVF 672
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
++D+ + G L+ A+ LI + + +W +++ C +H R+ E +I
Sbjct: 673 LGSSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMI 729
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L++LY+ + +A K+F+EIPQ D +W VLIS + R + D L LF + ++ G
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKM--QDQGVC 384
Query: 131 PDDVTCLLVLQACA-HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P+ T +VL++C+ ++ G+ IH +I +G L NS++ Y KC G A +
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
+F M EKD VSW+ M+S G + +++ F
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLF 477
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + E+ F M ++ + F + + C L G Q+H + + G
Sbjct: 607 MVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG 666
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD L ++++D+Y +A +F++ R+ V W +IS + + R+A+ LF+
Sbjct: 667 HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFE 726
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G P++V+ + VL AC+H G LE G K R + E +G ++ +Y
Sbjct: 727 LMINE--GITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYG 784
Query: 180 KCGSL 184
+ G L
Sbjct: 785 RAGRL 789
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N L+ +Y+K +L A ++F+ +P+ DV SW+ +ISG A G D + F MQ GV
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 232 PDDQTFTGVLSACS 245
P+ T + VL +CS
Sbjct: 385 PNQFTLSIVLKSCS 398
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 302/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + LF +M N F S +KCC S G QIHA + G
Sbjct: 146 MITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYG 205
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++L+D+Y+ EA +FD++ ++ V+WN LI+ Y R +AL LF
Sbjct: 206 CHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFV 265
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G +P + T +L +C+ +G LE G+ +H ++ + + N+L+ MY+K
Sbjct: 266 RMQRE--GYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAK 323
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + + DVVS ++M+ G A +G G++A + F M R G+ P+D TF V
Sbjct: 324 SGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSV 383
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH L+DEG + M K + I P + HY +VDLLGRAGLLDQA I M ++P
Sbjct: 384 LTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEP 442
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW LLGA ++HK+ +G + + EL G + LL N+Y+S G WE V ++R+
Sbjct: 443 TVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRK 502
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G++ P CS + ++ VH FV +DV+HP+ +I++M +++N+++K GYV + +
Sbjct: 503 IMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSH 562
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + +EK L YHSEKLA++F +L TPPG+TIR+ KN+R+C DCH+ K +S V
Sbjct: 563 VLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVK 622
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +G CSC DYW
Sbjct: 623 REIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 124/217 (57%), Gaps = 2/217 (0%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C + L G +H VL ++ D + +L+ +Y+ A +LFDE+P RD
Sbjct: 81 LKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDM 140
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+W +I+ Y +N R DAL LF + + G +P++ T +++ C ++ + G +IH
Sbjct: 141 VSWTSMITGYAQNDRASDALLLFPRMLSD--GAEPNEFTLSSLVKCCGYMASYNCGRQIH 198
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
++G S + + +SL+ MY++CG LG A VF + K+ VSW+A+I+G A G G
Sbjct: 199 ACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGE 258
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+A+ F MQR G P + T++ +LS+CS G +++G
Sbjct: 259 EALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQG 295
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD +L+ C LG L+ G+ +H ++ + + + NSL+ MY++CGSL A
Sbjct: 71 EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR 130
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F MP +D+VSW++MI+G A N DA+ F M G P++ T + ++ C +
Sbjct: 131 LFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMAS 190
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ G + +G N+ +VD+ R G L +A + +G K + + W L+
Sbjct: 191 YNCGRQ-IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS-WNALI 248
Query: 310 GA 311
Sbjct: 249 AG 250
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/437 (42%), Positives = 268/437 (61%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ EA +FD +PQ+D V+W +++ Y + + + L LF + R
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
C VL CA + ALE G ++H + GYG + N+L+AMY KCG++ A
Sbjct: 381 VNRSAFAC--VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
F+ M E+DVVSW+ MI+G A +G G++A+E F M+ PDD T GVL+ACSH G
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LV++G+ + M DFG+ HY C++DLLGRAG L +A+ L+ M +PDST+W L
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA RIH++ LG E + EL+ + +G YVLL N+Y+S G W +++R M E+G++
Sbjct: 559 LGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I ++ VH F D HP +IY L++++ ++K AGYV+ LH++ E
Sbjct: 619 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEE 678
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + L YHSEKLA+A+G+L PPG IRV KNLR+C DCHN K +S + R +++RD
Sbjct: 679 EKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDS 738
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHFR G CSC DYW
Sbjct: 739 NRFHHFRGGSCSCGDYW 755
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 15/229 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ AYS EE LF +M + + + + FAC + C +L G+Q+H R++R
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLHGRLIR 411
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + + L+ +Y +A F+E+ +RD V+WN +I+ Y R+ ++AL +
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH---GYGSKMNLCNSLI 175
FD + + KPDD+T + VL AC+H G +E G I + S H G +K +I
Sbjct: 472 FDMM--RTTSTKPDDITLVGVLAACSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMI 527
Query: 176 AMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIE 220
+ + G L A ++ K MP E D W A++ ++ + GR A E
Sbjct: 528 DLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 118/287 (41%), Gaps = 47/287 (16%)
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ D+ LM Y + K EA +LFD +P RD V+WN+++S Y R +A LFD
Sbjct: 190 EWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD- 248
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS--------------- 166
+ D T V+ A G LE ++ + E S
Sbjct: 249 -----AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 303
Query: 167 ------KMNLC------NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
M C N+++ Y++ G L A VF MP+KD VSW+AM++ + G
Sbjct: 304 EAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGC 363
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHY 273
+ ++ F M R G + + F VLS C+ ++ GM R+ + +G+
Sbjct: 364 SEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV------- 416
Query: 274 GCVVD-----LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
GC V + + G ++ A M + D W T++ H
Sbjct: 417 GCFVGNALLAMYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARH 462
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 129/293 (44%), Gaps = 41/293 (13%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
S G L + A + R + D+ TL+ + +A LFDE+P RD+V +NV+IS
Sbjct: 80 SANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMIS 139
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ + A FD L E+ D V+ +L A G +E + +E
Sbjct: 140 SHANHGLVSLARHYFD-LAPEK-----DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDA 193
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
S N+L++ Y + G + A E+F MP +DVVSW+ M+SG A G +A F A
Sbjct: 194 IS----WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA 249
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD--------------------- 263
VF T+T V+S + G+++E D M +
Sbjct: 250 APVRDVF----TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 305
Query: 264 ---FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
F ++P N+ + ++ +AG+L++A + +M K D+ W +L A
Sbjct: 306 KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAA 357
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 23/246 (9%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N I + + G + A +F MP + +++AM++G + NG A F A+ R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ ++ +L A + + + D M + Y ++ GL+ A
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT-----YNVMISSHANHGLVSLARH 152
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
+ + D+ W +L A +V G RV E ++ D + L S
Sbjct: 153 YF-DLAPEKDAVSWNGMLAA-----YVRNG-RVEEARGLFNSRTEWDAISWNALMSGYVQ 205
Query: 352 WEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV--DDVSHPRINEIYQMLDEINKQL 409
W K+ E RE + PG + +V + D V R+ + + D
Sbjct: 206 WGKMSEARELFDR-----MPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTA 260
Query: 410 KIAGYV 415
++GY
Sbjct: 261 VVSGYA 266
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/437 (42%), Positives = 268/437 (61%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ EA +FD +PQ+D V+W +++ Y + + + L LF + R
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
C VL CA + ALE G ++H + GYG + N+L+AMY KCG++ A
Sbjct: 381 VNRSAFAC--VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
F+ M E+DVVSW+ MI+G A +G G++A+E F M+ PDD T GVL+ACSH G
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LV++G+ + M DFG+ HY C++DLLGRAG L +A+ L+ M +PDST+W L
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA RIH++ LG E + EL+ + +G YVLL N+Y+S G W +++R M E+G++
Sbjct: 559 LGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 618
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I ++ VH F D HP +IY L++++ ++K AGYV+ LH++ E
Sbjct: 619 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEE 678
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + L YHSEKLA+A+G+L PPG IRV KNLR+C DCHN K +S + R +++RD
Sbjct: 679 EKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDS 738
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHFR G CSC DYW
Sbjct: 739 NRFHHFRGGSCSCGDYW 755
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 15/229 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ AYS EE LF +M + + + + FAC + C +L G+Q+H R++R
Sbjct: 354 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLHGRLIR 411
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + + L+ +Y +A F+E+ +RD V+WN +I+ Y R+ ++AL +
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH---GYGSKMNLCNSLI 175
FD + + KPDD+T + VL AC+H G +E G I + S H G +K +I
Sbjct: 472 FDMM--RTTSTKPDDITLVGVLAACSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMI 527
Query: 176 AMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIE 220
+ + G L A ++ K MP E D W A++ ++ + GR A E
Sbjct: 528 DLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 115/280 (41%), Gaps = 47/280 (16%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
LM Y + K EA +LFD +P RD V+WN+++S Y R +A LFD +
Sbjct: 197 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD------AA 250
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS---------------------K 167
D T V+ A G LE ++ + E S
Sbjct: 251 PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFN 310
Query: 168 MNLC------NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
M C N+++ Y++ G L A VF MP+KD VSW+AM++ + G + ++
Sbjct: 311 MMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQL 370
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVD-- 278
F M R G + + F VLS C+ ++ GM R+ + +G+ GC V
Sbjct: 371 FIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNA 423
Query: 279 ---LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + G ++ A M + D W T++ H
Sbjct: 424 LLAMYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARH 462
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 41/293 (13%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
S G L + A + R + D+ TL+ + +A LFDE+P RD+V +NV+IS
Sbjct: 80 SANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMIS 139
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ + A FD + D V+ +L A G +E + +E
Sbjct: 140 SHANHGLVSLARHYFD------LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV 193
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
S N+L++ Y + G + A E+F MP +DVVSW+ M+SG A G +A F A
Sbjct: 194 IS----WNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA 249
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD--------------------- 263
VF T+T V+S + G+++E D M +
Sbjct: 250 APVRDVF----TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 305
Query: 264 ---FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
F ++P N+ + ++ +AG+L++A + +M K D+ W +L A
Sbjct: 306 KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAA 357
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 112/305 (36%), Gaps = 32/305 (10%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N I + + G + A +F MP + +++AM++G + NG A F A+ R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ ++ +L A + + + D M + Y ++ GL+ A
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT-----YNVMISSHANHGLVSLARH 152
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
+ + D+ W +L A +V G RV E ++ D + L S
Sbjct: 153 YF-DLAPEKDAVSWNGMLAA-----YVRNG-RVEEARGLFNSRTEWDVISWNALMSGYVQ 205
Query: 352 WEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV--DDVSHPRINEIYQMLDEINKQL 409
W K+ E RE + PG + +V + D V R+ + + D
Sbjct: 206 WGKMSEARELFDR-----MPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTA 260
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG--VLATPPGTTIRVAKNLRICVD 467
++GY N EE E+ A+++ V A + AK L +
Sbjct: 261 VVSGYA-------QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Query: 468 CHNFA 472
C N A
Sbjct: 314 CRNVA 318
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 291/506 (57%), Gaps = 24/506 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + L ++M ++ + + A + + C + SL G +H + +
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LMD+Y+ A +F + +D ++WN ++
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------- 288
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
KPD T +L ACA L ALE G++IH YI +GY S ++ N+L+ +Y K
Sbjct: 289 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG LG+A +F +P KD+VSW+ MI+G M+G+G +AI +F M+ AG+ PD+ +F +
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 401
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G F M DF I P + HY C+VDLL R G L +AY+ I ++ + P
Sbjct: 402 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 461
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRI+ + L E+V E + EL+ + +G YVLL N+Y+ WE+VK +RE
Sbjct: 462 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMRE 521
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVV-DDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ +KGL+ PGCS I +KG V+ FV ++ SHP +I +L ++ +++K GY +
Sbjct: 522 KIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 581
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N +K AL HSEKLA+AFG+L PP TIRV KNLR+C DCH AK +S
Sbjct: 582 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 641
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC +W
Sbjct: 642 RREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 4/235 (1%)
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
++S A +LFD++ RD ++WN +IS Y+ N T L ++ + G D T +
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY--LGIDVDLATIIS 118
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL CA G L G+ +H + + ++N N+L+ MYSKCG L A VF+ M E++
Sbjct: 119 VLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 178
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW++MI+G +G AI M++ GV D T +L AC+ G +D G D
Sbjct: 179 VVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 238
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
+ + + N+ ++D+ + G ++ A + ++M VK D W T++G +
Sbjct: 239 YIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELK 291
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 286/507 (56%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + LF++M N + C L G IH +V DG
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294
Query: 61 YQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
Y+ D + L+++Y+ S E A ++F+ + RD + WN+LI Y++ + +DAL +F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E P+++T VL ACA LGA G+ +H I+ + + L NSL+ MY+
Sbjct: 355 KQMQLE--NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYN 412
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CGSL VF + +K +VSWS +I+ A +GH R +E F + + G+ DD T
Sbjct: 413 RCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVS 472
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
LSACSH G++ EG+ M D G+ P+ H+ C+VDLL RAG L+ A LI M
Sbjct: 473 TLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL-NLYSSVGDWEKVKEL 358
PD+ W +LL C++H RV + L EL++++ V LL N+Y+ G W+ V++
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKT 592
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R N + + PGCS I + VHEFV D SHP I + ++KQ+K AGYV ++
Sbjct: 593 R---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDM 649
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LHN+ EEK L YHSEKLAIA+G+++TPPGT + + KNLR CVDCH AK +S +
Sbjct: 650 RMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRI 709
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD RFHHF G CSC DYW
Sbjct: 710 VGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 154/314 (49%), Gaps = 5/314 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V A++ + E + +M + + + AI C L G +HA +L
Sbjct: 29 IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D L T L+ +Y+ A K FDE+ ++ V WN LI+ Y RN R AL ++
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 120 -DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
D +++ G KPD +T L AC +G + G +I GY S + N+LI MY
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCGSL A +VF + +DV++W+ MISG A G A+E F M P+ TF
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-AGLLDQAYQLITSMG 297
G+L+AC++ +++G ++ +D G ++ ++++ + + L++A Q+ M
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVRED-GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMR 327
Query: 298 VKPDSTIWRTLLGA 311
+ D W L+ A
Sbjct: 328 TR-DVITWNILIVA 340
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 45/328 (13%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +F I ++V+W ++++ + RN R+AL + + E G +PD ++ +
Sbjct: 10 DALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLE--GLRPDGAMFVVAIGV 67
Query: 143 CAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
C+ L+ G+ +H I E + L +LI MY++C L +A + F M +K +V+
Sbjct: 68 CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127
Query: 202 WSAMISGLAMNGHGRDAIESFGAM---QRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-- 256
W+A+I+G + NG R A++ + M G+ PD TF+ L AC+ G + +G
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEA 187
Query: 257 --------------------------LDRMSKDFGILPN--IHHYGCVVDLLGRAGLLDQ 288
L+ K F L N + + ++ + G Q
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247
Query: 289 AYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---L 342
A +L MG KP+ + LL AC + + G R I + ES D V+ L
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG-RAIHRKVREDGYES-DLVIGNVL 305
Query: 343 LNLYSS-VGDWEKVKELREFMNEKGLQT 369
LN+Y+ E+ +++ E M + + T
Sbjct: 306 LNMYTKCSSSLEEARQVFERMRTRDVIT 333
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 48/225 (21%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGS+ A VF + + VSW+ +++ A NGH R+A+ + M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 237 FTGVLSACSHCGLVDEGM----MFLDRMSKDFGILPN---IHHYGCVVDL---------L 280
F + CS + +G M L+ +F I+ I Y DL +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 281 GRAGLLD------------------QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVT 319
G+ L+ + YQ + S G+KPD+ + + L AC + ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 320 LGERVIEHLIELKAQESG---DYVL---LLNLYSSVGDWEKVKEL 358
G IE + SG D ++ L+N+YS G E +++
Sbjct: 181 QGRE-----IEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 301/506 (59%), Gaps = 2/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A+ + P ++ KM + + + + + IH V R
Sbjct: 312 LLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRC 371
Query: 61 YQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ L D L ++D+Y+ A K+F+ +P +D ++WN LI+ Y +N +A+ ++
Sbjct: 372 WFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVY 431
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ R SG P+ T + +L A + LGAL+ G K H + ++ + + L+ MY
Sbjct: 432 SSM-RYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYG 490
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A +F +P + VSW+A+IS ++G+G A++ F MQ GV PD TF
Sbjct: 491 KCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVS 550
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLVDEG M + +GI P++ HYGC+VDL GRAG L++A+ + +M V+
Sbjct: 551 LLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVR 610
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD ++W LLGACRIH++V L V +HL++++++ G YVLL N+Y+ +G WE V E+R
Sbjct: 611 PDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVR 670
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
++GL+ TPG S+I + + F + +HP+ EIY L + ++K GYV +
Sbjct: 671 SLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYN 730
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ +EK N L+ HSE+LA+AFG+++TPP TT+++ KNLR+C DCHN K +S +
Sbjct: 731 FVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKIT 790
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 791 EREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L G ++H VL+ G++ D + + + YS F AC LFD + RD WN +IS
Sbjct: 154 NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMIS 213
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ N + +AL +FD + + D VT +L C L + G IH Y + G
Sbjct: 214 GFYLNGKVAEALEVFDEMRFKS--VSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGL 271
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ +CN+LI MY+K G L A +F M +D+VSW+++++ N A+ +
Sbjct: 272 EFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNK 331
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M GV PD T + S + G +++ L +I ++D+ + G
Sbjct: 332 MHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLG 391
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLL 309
+D A ++ + VK D W +L+
Sbjct: 392 FIDSARKVFEGLPVK-DVISWNSLI 415
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 6/266 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA ++ G L L++ Y+ A FD+I +D WN +IS Y R
Sbjct: 61 QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIG 120
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
A+ F+ S + D T V++AC G L+ G K+H + + G+ + +
Sbjct: 121 HFHAAVDCFNEF-LSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYI 176
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
S I YS+ G + +A +F M +D+ +W+AMISG +NG +A+E F M+ V
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T + +L C + G++ + + G+ ++ ++++ + G L A
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVL-IHVYAIKLGLEFDLFVCNALINMYAKFGELRSAE 295
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHK 316
+ M V+ D W +LL A +K
Sbjct: 296 TIFNQMKVR-DIVSWNSLLAAFEQNK 320
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 6/181 (3%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+ +++H + G + L LI Y+ G + A F + KDV +W++MIS
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQ-TFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
A GH A++ F D TF V+ A CG +D+G + + G
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA---CGNLDDGRK-VHCLVLKLGFE 171
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+++ + R G + A L +M ++ D W ++ ++ V V +
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISGFYLNGKVAEALEVFDE 230
Query: 328 L 328
+
Sbjct: 231 M 231
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/569 (36%), Positives = 306/569 (53%), Gaps = 64/569 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + +S E F M + +I + F +K + G +H +L+ G
Sbjct: 111 LIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFG 170
Query: 61 YQLDSQLMTTLMDLY----------STFEKSFEACK------------------------ 86
+ DS + +L+D+Y F++S E+ K
Sbjct: 171 LEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKAT 230
Query: 87 -LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE-------------------- 125
LFD +P++DT +WN LI+ +++ A LF + +
Sbjct: 231 ELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEK 290
Query: 126 ---------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
E G +P+D T + L ACA +GAL+ G +IH Y+S +G+ + + +L+
Sbjct: 291 ALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVD 350
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCG++ A +VF EK ++ WS MI G A++GH R A++ F M+ G PD
Sbjct: 351 MYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVV 410
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL+ACSH G V+EG+ F D M + + I P++ HY VVD+LGRAG LD+A + I +M
Sbjct: 411 FLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAM 470
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+ PD +W L ACR HK+V + E + L++L+ + G YV L N Y+SVG W+ +
Sbjct: 471 PITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAE 530
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R M + G PG S I + +H FV D +H R EIY LDEI+ + GY
Sbjct: 531 RVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTK 590
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
EI LHN+ EEK AL YHSEKLA+AFG+++T PGTT+R+ KNLR+CVDCH+F K S
Sbjct: 591 EIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYAS 650
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ RE+I+RD RFHHF +G CSC DYW
Sbjct: 651 KMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + I+ S S+ A +F+ K+ ++A+I GLA N +I F M
Sbjct: 72 SSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLM 131
Query: 226 QRAGVFPDDQTFTGVLSACS-----------HCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
+ + PD TF VL + + HCG++ G+ F F + + Y
Sbjct: 132 LKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEF-----DSFVRVSLVDMYV 186
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL-GACRIHKHVTLGERVIEHLIELKA 333
V +L + D++ + + + V IW L+ G CR+ V + E +
Sbjct: 187 KVEELGSALKVFDESPESVKNGSV----LIWNVLIHGYCRMGDLV----KATELFDSMPK 238
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
+++G + L+N + +GD + KEL M EK +
Sbjct: 239 KDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNV 272
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 300/522 (57%), Gaps = 30/522 (5%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ LF +M + P + + ++ C L G +H ++ GY+ D+ L+
Sbjct: 206 QSIKLFMEMVNQFKP-DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 264
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE------ 126
++Y+ + ++F + +D+V+WN +I+ YI+N + D+L +F+N+ +
Sbjct: 265 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNT 324
Query: 127 -----------------------SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
G PD T L +L C+ L A G++IH I + G
Sbjct: 325 IIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLG 384
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
S + + N LI MYSKCGSL +F+VFK M KDVV+W+A+IS M G G+ A+ +FG
Sbjct: 385 LESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFG 444
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M+ AG+ PD F ++ ACSH GLV+EG+ + RM KD+ I P I HY CVVDLL R+
Sbjct: 445 EMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRS 504
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
LLD+A I SM +KPDS+IW LL ACR+ + ERV E +IEL ++G YVL+
Sbjct: 505 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 564
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y+++G W++V+ +R+ + +GL+ PGCS + ++ V+ F + E+ ++L
Sbjct: 565 NIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLG 624
Query: 404 EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLR 463
+ + GY+A + LH++ +EK + L HSE+LAIAFG+L T PGT ++V KNLR
Sbjct: 625 MLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLR 684
Query: 464 ICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+C DCH K +S + RE+++RD RFH F++G CSC DYW
Sbjct: 685 VCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 172/372 (46%), Gaps = 48/372 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA + + E L+ + ++ R+ + + I C IH RVL G
Sbjct: 86 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG 145
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+D+Y F +A K+F+E+P RD V+WN LIS Y N +AL ++
Sbjct: 146 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 205
Query: 121 N----LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+ KPD +T +LQAC HLG LEFG+ +H Y+ GY N LI
Sbjct: 206 QSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 265
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCG+L + EVF GM KD VSW++MI+ NG D+++ F M+ + T
Sbjct: 266 MYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDII----T 321
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH--------------------YGCV 276
+ ++++C H + G+ + RM + G+ P++ +GC+
Sbjct: 322 WNTIIASCVHSEDCNLGLRMISRMRTE-GVTPDMATMLSILPVCSLLAAKRQGKEIHGCI 380
Query: 277 ---------------VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
+++ + G L ++Q+ M K D W L+ AC ++ G
Sbjct: 381 FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE---G 436
Query: 322 ERVIEHLIELKA 333
++ + E++A
Sbjct: 437 KKAVRAFGEMEA 448
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 14/233 (6%)
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK-GMPEKDVVSWSAMISGLAMN 212
K+H I G + LIA Y+ +F VF+ P +V W+++I L N
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM--FLDRMSKDFGILPNI 270
G +A+ + QR + PD TF V++AC+ GL+D M DR+ D G ++
Sbjct: 94 GLFSEALSLYSETQRIRLQPDTYTFPSVINACA--GLLDFEMAKSIHDRV-LDMGFGSDL 150
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH----VTLGERVIE 326
+ ++D+ R LD+A ++ M ++ D W +L+ + + + + + I+
Sbjct: 151 YIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYNANGYWNEALEIYYQSIK 209
Query: 327 HLIELKAQESGDYVLLLNLYSS---VGDWEKVKELREFMNEKGLQTTPGCSTI 376
+E+ Q D + + ++ + +GD E K + ++M G + S I
Sbjct: 210 LFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 262
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 300/505 (59%), Gaps = 6/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + P E ++ +MR+ + + I+ CM + G +H R+LR
Sbjct: 179 MVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHC 238
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D T+L+ +Y+ AC++F +P R+ V W+ LIS + +N R +AL LF
Sbjct: 239 MRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFR 298
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + G +P + L ACA +G L+ G+ IH +I + L +++ MYSK
Sbjct: 299 EL--QADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSK 355
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A ++F + +D+V W+A+I+ +G G DA+ F + G+ PD TF +
Sbjct: 356 CGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASL 415
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV+EG + DRM K+FGI P HY C+VDLL R+GL+++A ++ SM +P
Sbjct: 416 LSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEP 475
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW LL C +K + LGE + + ++EL+ ++ G L+ NLY++ W+KV+E+R+
Sbjct: 476 TIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRK 535
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G + PG S I +KG H FV++D SHP+ EI +M+ ++N +++ GYV
Sbjct: 536 LMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEF 595
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H+L ++ LSYHSE+LAIAFG+L T PGT + + KNLR+C DCH+ K +S + +
Sbjct: 596 VYHDL---DEDQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVD 652
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 653 REIVVRDAKRFHHFKDGACSCGDYW 677
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
WN L+S + R AL +F L S +P+ T L L ACA LG L+ E +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRAL---PSSARPNSTTFTLTLTACARLGDLDAAESVRVR 132
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
GYG + +C++L+ +YS+CG++ A VF GMP KD V+WS M++G G +A
Sbjct: 133 AFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEA 192
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ + M+ GV D+ GV+ AC G G R+ + + ++ +V
Sbjct: 193 LAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHC-MRMDVVTTTSLVS 251
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + G LD A Q+ M + D T W L+
Sbjct: 252 MYAKNGHLDVACQVFRMMPYRNDVT-WSALI 281
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/457 (39%), Positives = 280/457 (61%), Gaps = 2/457 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+HA ++++ ++ + T L+D+Y+ +A F+ + RD W V+I+ Y +
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ AL F + +E G KP++ T L C+ L +LE G+++H + + G+ S M
Sbjct: 595 TNQGEKALNYFRQMQQE--GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDM 652
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ ++L+ MY+KCG + A +F+ + +D ++W+ +I G A NG G A+ +F M
Sbjct: 653 FVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDE 712
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ PD TFTG+LSACSH GLV+EG + M +DFGI P + H C+VD+LGR G D+
Sbjct: 713 GISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDE 772
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
I M + ++ IW T+LGA ++H ++ LGE+ L EL+ +E Y+LL N++++
Sbjct: 773 LEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFAT 832
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
G W+ VK +R M+ KG++ PGCS + G VH FV D SHP+I EI+ LDE++++
Sbjct: 833 EGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRE 892
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
L YV + LHN+G EK L +HSE+LA+ F +++T IR+ KNLRIC DC
Sbjct: 893 LASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDC 952
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H+ K +S + N+E+++RD RFHHF+ G CSCND+W
Sbjct: 953 HDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 146/299 (48%), Gaps = 4/299 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ YLF++M+ + I N F + +K C +L G Q+HA+ + G LD + + L+
Sbjct: 196 DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALV 255
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
DLY+ + A K+F +P+++ V WNVL++ Y + L LF ++ + C +
Sbjct: 256 DLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKC--N 313
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ T VL+ CA+ L+ G+ IH I + GY + L+ MYSKCG A VFK
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFK 373
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+ + D+V WSA+I+ L G ++I+ F M+ P+ T +LSA ++ G +
Sbjct: 374 TIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY 433
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + K +G ++ +V + + G + +L SM V D W L
Sbjct: 434 GQSIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 4/309 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ EE LF MR N + + +L G IHA V + G
Sbjct: 386 LITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG 445
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + L+ +Y + KL++ + RD ++WN +S L +F
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY 505
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G P+ T + +L +C+ L + +G ++H +I ++ +C +LI MY+K
Sbjct: 506 HM--LEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAK 563
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C L A F + +D+ +W+ +I+ A G A+ F MQ+ GV P++ T G
Sbjct: 564 CMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGC 623
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CS ++ G L M G + ++ +VD+ + G +++A L ++ ++
Sbjct: 624 LSGCSSLASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRR 681
Query: 301 DSTIWRTLL 309
D+ W T++
Sbjct: 682 DTIAWNTII 690
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 168/341 (49%), Gaps = 14/341 (4%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
IH +++D DS L +L+++Y+ S A + ++P RD V+W LI +
Sbjct: 134 IHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGF 193
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
D++ LF + E G P++ T L+AC+ AL+ G+++H + G + +
Sbjct: 194 ANDSIYLFQEMQNE--GIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
++L+ +Y+KCG + +A ++F GMPE++ V+W+ +++G A G ++ F +M V
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC-VVDLLGRAGLLDQAY 290
++ T T VL C++ + +G + + K G N GC +VD+ + GL A
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIK-CGYEGN-EFIGCGLVDMYSKCGLAIDAI 369
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--LLNLYSS 348
+ ++ KPD +W L+ C + + + HL+ L Y + LL+ ++
Sbjct: 370 GVFKTIK-KPDIVVWSALI-TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCS----TIGLK-GVVHE 384
G+ + + + + + G +T S T+ +K G VH+
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 121/229 (52%), Gaps = 2/229 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF M + + N F + +K C +L G IH+ +++ GY+ + + L+D+YS
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ +A +F I + D V W+ LI+C + ++ +++ LF + ++ P+ T
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT--LPNQYTI 418
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+L A + G L++G+ IH + ++G+ + + + N+L+ MY K G + ++++ M +
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+D++SW+A +SGL G + F M G P+ TF +L +CS
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ ++ E+ F +M+Q+ + N F + + C SL GG Q+H+ V + G
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ EA LF+ + +RDT+AWN +I Y +N + AL F
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G PD VT +L AC+H G +E G E + + G ++ C ++ +
Sbjct: 708 MMLDE--GISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G F+ + +K +S +A+I
Sbjct: 766 RVGK----FDELEDFIQKMQLSQNALI 788
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ CA +L + IH I + +L SL+ +Y+KC A V MP++D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW+A+I GL G D+I F MQ G+ P++ T L ACS C +D G
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ K G+L ++ +VDL + G ++ A ++ M + D T W LL V
Sbjct: 238 QAFK-LGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT-WNVLLNGYAQRGDV 295
Query: 319 TLGERVIEHLIELKAQ 334
T ++ ++EL +
Sbjct: 296 TGVLKLFCSMMELDVK 311
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/437 (42%), Positives = 268/437 (61%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T++ Y+ EA +FD +PQ+D V+W +++ Y + + + L LF + R
Sbjct: 196 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 255
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
C VL CA + ALE G ++H + GYG + N+L+AMY KCG++ A
Sbjct: 256 VNRSAFAC--VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 313
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
F+ M E+DVVSW+ MI+G A +G G++A+E F M+ PDD T GVL+ACSH G
Sbjct: 314 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 373
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
LV++G+ + M DFG+ HY C++DLLGRAG L +A+ L+ M +PDST+W L
Sbjct: 374 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 433
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGA RIH++ LG E + EL+ + +G YVLL N+Y+S G W +++R M E+G++
Sbjct: 434 LGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 493
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S I ++ VH F D HP +IY L++++ ++K AGYV+ LH++ E
Sbjct: 494 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEE 553
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + L YHSEKLA+A+G+L PPG IRV KNLR+C DCHN K +S + R +++RD
Sbjct: 554 EKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDS 613
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHFR G CSC DYW
Sbjct: 614 NRFHHFRGGSCSCGDYW 630
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 15/229 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ AYS EE LF +M + + + + FAC + C +L G+Q+H R++R
Sbjct: 229 MLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC--VLSTCADIAALECGMQLHGRLIR 286
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY + + L+ +Y +A F+E+ +RD V+WN +I+ Y R+ ++AL +
Sbjct: 287 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 346
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH---GYGSKMNLCNSLI 175
FD + + KPDD+T + VL AC+H G +E G I + S H G +K +I
Sbjct: 347 FDMM--RTTSTKPDDITLVGVLAACSHSGLVEKG--ISYFYSMHHDFGVTAKPEHYTCMI 402
Query: 176 AMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIE 220
+ + G L A ++ K MP E D W A++ ++ + GR A E
Sbjct: 403 DLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 451
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 47/287 (16%)
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ D LM Y + K EA +LFD +P RD V+WN+++S Y R +A LFD
Sbjct: 65 EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD- 123
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS--------------- 166
+ D T V+ A G LE ++ + E S
Sbjct: 124 -----AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 178
Query: 167 ------KMNLC------NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
M C N+++ Y++ G L A VF MP+KD VSW+AM++ + G
Sbjct: 179 EAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGC 238
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHY 273
+ ++ F M R G + + F VLS C+ ++ GM R+ + +G+
Sbjct: 239 SEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV------- 291
Query: 274 GCVVD-----LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
GC V + + G ++ A M + D W T++ H
Sbjct: 292 GCFVGNALLAMYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARH 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 26/227 (11%)
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FD P++D V+WN +++ Y+RN R +A LF+ S + D ++ ++ G
Sbjct: 29 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN------SRTEWDVISWNALMSGYVQWG 82
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
+ ++ + G + N +++ Y++ G + A +F P +DV +W+A++S
Sbjct: 83 KMSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 138
Query: 208 GLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G A NG +A F AM +R V ++ +++A ++DE + F +
Sbjct: 139 GYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEA-------KELFNM 186
Query: 267 LP--NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+P N+ + ++ +AG+L++A + +M K D+ W +L A
Sbjct: 187 MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAA 232
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 300/515 (58%), Gaps = 23/515 (4%)
Query: 9 SSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S EE F L+ KM ++ + F +K C G Q+H ++++ G+ D +
Sbjct: 106 SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYV 165
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ LY + A K+FDE+P+R V+WN +I +R AL LF + R
Sbjct: 166 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--- 222
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI---SEHGYGSKMNLCNSLIAMYSKCGSL 184
+PD T VL ACA LG+L G H ++ + + + NSLI MY KCGSL
Sbjct: 223 SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 282
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLS 242
MA +VF+GM ++D+ SW+AMI G A +G +A+ F M +R V P+ TF G+L
Sbjct: 283 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 342
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
AC+H G V++G + D M +D+ I P + HYGC+VDL+ RAG + +A ++ SM +KPD+
Sbjct: 343 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 402
Query: 303 TIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-------SGDYVLLLNLYSSVGDWEK 354
IWR+LL AC + V L E + ++I K SG YVLL +Y+S W
Sbjct: 403 VIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWND 462
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +R+ M+E G++ PGCS+I + G+ HEF D SHP+ +IYQ L I+ +L+ GY
Sbjct: 463 VGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 522
Query: 415 VAEITS----ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ + + + N G++E +L HSE+LAIAFG++ PP T IR+ KNLR+C DCH
Sbjct: 523 LPDRSQAPLVDATNDGSKEY--SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 580
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S V+N E+I+RDR+RFHHF++G CSC DYW
Sbjct: 581 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 615
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 147/314 (46%), Gaps = 14/314 (4%)
Query: 41 MKFCSLMGGL-QIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ CS M L Q+HA LR Y + L ++ L S+F A ++FD I +
Sbjct: 32 LQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSS 91
Query: 97 VAWNVLI-SCYIRNQRTRDALCLFDN-LNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
WN LI +C R +A L+ L R ES PD T VL+ACA++ G++
Sbjct: 92 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS--PDKHTFPFVLKACAYIFGFSEGKQ 149
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H I +HG+G + + N LI +Y CG L +A +VF MPE+ +VSW++MI L G
Sbjct: 150 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 209
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIH 271
A++ F MQR+ PD T VLSAC+ G + G FL R D + ++
Sbjct: 210 YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC-DVDVAMDVL 267
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
++++ + G L A Q+ M K D W ++ H + +++
Sbjct: 268 VKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 326
Query: 332 KAQESGDYVLLLNL 345
+ + V + L
Sbjct: 327 RENVRPNSVTFVGL 340
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/508 (39%), Positives = 294/508 (57%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + F +F MR+ + + C L G +IH V+R+G
Sbjct: 196 MMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG 255
Query: 61 YQ---LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+ LM +++D+Y E A KLF+ + +D V+WN LIS Y + AL
Sbjct: 256 ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALE 315
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + G PD+VT + VL AC + AL G + Y+ + GY + + +LI M
Sbjct: 316 LFGRM--VVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGM 373
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+ CGSL A VF MPEK++ + + M++G ++G GR+AI F M GV PD+ F
Sbjct: 374 YANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIF 433
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
T VLSACSH GLVDEG +M++D+ + P HY C+VDLLGRAG LD+AY +I +M
Sbjct: 434 TAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMK 493
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KP+ +W LL ACR+H++V L + L EL YV L N+Y++ WE V+
Sbjct: 494 LKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVEN 553
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R + ++ L+ P S + L +VH+F V D SH + ++IY L ++N+QLK AGY +
Sbjct: 554 VRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPD 613
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ L+++ E K L HSE+LA+AF ++ T PGTTIR+ KNLR+C DCH K++S
Sbjct: 614 TSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISK 673
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ NRE+I+RD RFHHFR+G CSC YW
Sbjct: 674 LTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 5/249 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y+ ++SP +L+ KM + F F +K C G ++HA V+ G
Sbjct: 95 MIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGG 154
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +++ +Y F A +FD + RD +WN ++S +++N R A +F
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG 214
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM---NLCNSLIAM 177
++ R+ G D T L +L AC + L+ G++IH Y+ +G ++ L NS+I M
Sbjct: 215 DMRRD--GFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDM 272
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y C S+ A ++F+G+ KDVVSW+++ISG G A+E FG M G PD+ T
Sbjct: 273 YCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTV 332
Query: 238 TGVLSACSH 246
VL+AC+
Sbjct: 333 ISVLAACNQ 341
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
Query: 45 SLMGGLQIHARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
SL LQ+HA V G + ++ L T L Y+ A +FD+I +++ WN +I
Sbjct: 37 SLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMI 96
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
Y N AL L+ L G KPD+ T VL+AC L E G K+H + G
Sbjct: 97 RGYACNNSPSRALFLY--LKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGG 154
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ + NS+++MY K G + A VF M +D+ SW+ M+SG NG R A E FG
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG 214
Query: 224 AMQRAGVFPDDQTFTGVLSAC 244
M+R G D T +LSAC
Sbjct: 215 DMRRDGFVGDRTTLLALLSAC 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 25/241 (10%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN-LCNSLIAMYSKCGSLGMAFEV 190
D + C +LQ+ + +L ++H +++ G + L L A Y+ CG + A +
Sbjct: 21 DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F + K+ W++MI G A N A+ + M G PD+ T+ VL AC
Sbjct: 81 FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC------ 134
Query: 251 DEGMMFLDRMSKDF-------GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
G + L M + G+ +++ ++ + + G ++ A + M V+ D T
Sbjct: 135 --GDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVR-DLT 191
Query: 304 IWRTLLGACRIHKHVTLGER--VIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKVKELRE 360
W T++ V GE E +++ GD LL L S+ GD +K +E
Sbjct: 192 SWNTMMSG-----FVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKE 246
Query: 361 F 361
Sbjct: 247 I 247
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 305/496 (61%), Gaps = 8/496 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + ++ LF++M + + + + + C + S+ G Q+H+ + G
Sbjct: 178 MISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHG 237
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLYS + AC+L + + +D ++WN LI Y ++AL LF
Sbjct: 238 FGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQ 297
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG----SKMNLCNSLIA 176
+ R SG P+DVT L +L ACAHLGA++ G IH YI + G + +L SLI
Sbjct: 298 EMLR--SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLID 355
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCG + A +V + + +W+AMI G AM+G A + F M++ G+ PDD
Sbjct: 356 MYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 415
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF G+LSACSH G++D G M +D+ I P + HYGC++DLLG +GL +A ++I +
Sbjct: 416 TFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINT 475
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M ++PD IW +LL AC+IH ++ LGE + LI+++ + G YVLL N+Y++ G W +V
Sbjct: 476 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEV 535
Query: 356 KELREFMNEKGL-QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
++R +N+KG+ + PGCS+I + VVHEF++ D HP+ EIY ML+E+ L+ AG+
Sbjct: 536 XKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGF 595
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
V + + L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K+
Sbjct: 596 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 655
Query: 475 LSGVYNREVIIRDRLR 490
+S +Y RE+I RDR R
Sbjct: 656 ISKIYKREIIARDRTR 671
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 173/349 (49%), Gaps = 36/349 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + N F F +K C K + G QIH VL+ G
Sbjct: 46 MFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLG 105
Query: 61 YQLDSQLMTTLMDLYS----------TFEKSF---------------------EACKLFD 89
+ LD + T+L+ +Y+ F++S A K+FD
Sbjct: 106 FDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFD 165
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
EIP +D V+WN +IS Y + AL LF + + + KPD+ T V+ ACA G++
Sbjct: 166 EIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK--TNVKPDESTMATVVSACAQSGSI 223
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I++HG+GS + + N+LI +YSKCG + A E+ +G+ KDV+SW+ +I G
Sbjct: 224 ELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGY 283
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+H G +D G +++D+ K +
Sbjct: 284 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVV 343
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G +D A Q+ S + W ++ +H
Sbjct: 344 TNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMH 392
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+ IP+ + + WN++ + + AL L+ + G P+ T +L++C
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLY--VVMISLGLLPNFFTFPFLLKSC 85
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK----------- 192
A + G++IH ++ + G+ + + SLI+MY++ G L A +VF
Sbjct: 86 AKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYT 145
Query: 193 --------------------GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+P KDVVSW+AMISG A G+ + A+E F M + V P
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKP 205
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
D+ T V+SAC+ G ++ G ++ D G N+ ++DL + G ++ A +L
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWIN-DHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNL 345
+ + K D W TL+G + H+ L + + E L++ E+ + V +L++
Sbjct: 265 LEGLSNK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 314
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A VF+ +PE + + W+ M G A++ A++ + M G+ P+ TF +L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+ EG + K G +++ + ++ + + G L+ A Q + D
Sbjct: 85 CAKSKTFKEGQQIHGHVLK-LGFDLDLYVHTSLISMYAQNGRLEDA-QKVFDRSSHRDVV 142
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ L+ ++ +++ + E+ ++ + +++ Y+ G+++K EL + M
Sbjct: 143 SYTALITGYASRGYIESAQKMFD---EIPIKDVVSWNAMISGYAETGNYKKALELFKEMM 199
Query: 364 EKGLQTTPGCSTIG 377
+ ++ P ST+
Sbjct: 200 KTNVK--PDESTMA 211
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/495 (41%), Positives = 294/495 (59%), Gaps = 8/495 (1%)
Query: 13 EGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+ F L+ +M P N F +F +K C +L G Q+HA+ G + + T L
Sbjct: 112 DTFLLYRRMLHAGSPAPNSFTLAFVLKAC---TALGEGQQLHAQAFGHGLEPSPYVQTGL 168
Query: 72 MDLYSTFEKSFEACKLFD-EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
++LY+ E+ A +FD + ++ VAW+ +I Y R +AL LF ++ + G
Sbjct: 169 LNLYARCEEVALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDM--QAVGVN 226
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD+VT + V+ ACA GAL+ G+ +H +I G + L +LI MY+KCG + A V
Sbjct: 227 PDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSV 286
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M E+D +WSAMI GLAM+G DA+ F M + V P++ TF GVLSAC+H GLV
Sbjct: 287 FDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLV 346
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G + M ++ GI ++ +YGC+VDLL R+GLLD+A+ +T M + P+S IWR LL
Sbjct: 347 DDGRRYWCTM-QELGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLV 405
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
A + + + E L EL+ Q +YVLL NLY+ W++V+ +R+ M + +
Sbjct: 406 ASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVV 465
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
GCS+I + G +H+FVV D SHP I +I +L EI ++ AG+ + LH++ EEK
Sbjct: 466 AGCSSIEINGYLHKFVVSDGSHPEIKKIRLVLREIADRVLCAGHKPWTAAVLHDVVEEEK 525
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
AL HSE+LAIA+G+L T IRV KNLR C DCH K++S Y RE+I+RDR+R
Sbjct: 526 EVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVTKIISKSYGREIIVRDRVR 585
Query: 491 FHHFREGRCSCNDYW 505
FH F G CSCND+W
Sbjct: 586 FHRFIGGSCSCNDFW 600
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 141/299 (47%), Gaps = 23/299 (7%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCY-----IRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
A LFD+IP+ +N LI N T D L+ + S P+ T
Sbjct: 77 ARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPA-PNSFTLAF 135
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-K 197
VL+AC LG G+++H HG + L+ +Y++C + +A VF GM E K
Sbjct: 136 VLKACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDK 192
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM--- 254
++V+WS+MI G + G +A+ F MQ GV PD+ T V+SAC+ G +D G
Sbjct: 193 NLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVH 252
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
F+DR GI ++ ++D+ + GL+++A + SM V+ D+ W ++ +
Sbjct: 253 AFIDRK----GITVDLELSTALIDMYAKCGLIERAKSVFDSM-VERDTKAWSAMIVGLAM 307
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF---MNEKGLQTT 370
H + +++LK + + V + + S+ V + R + M E G++ +
Sbjct: 308 HGLAEDALGLFSRMLQLKVRPNN--VTFVGVLSACAHSGLVDDGRRYWCTMQELGIEAS 364
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS E LF M+ + + I C K +L G +HA + R G
Sbjct: 200 MIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKG 259
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+D +L T L+D+Y+ A +FD + +RDT AW+ +I + DAL LF
Sbjct: 260 ITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFS 319
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + +P++VT + VL ACAH G ++ G + + E G + M ++ + +
Sbjct: 320 RMLQLK--VRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQELGIEASMENYGCMVDLLCR 377
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMI 206
G L AF GMP + V W ++
Sbjct: 378 SGLLDEAFSFVTGMPISPNSVIWRNLL 404
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 300/515 (58%), Gaps = 23/515 (4%)
Query: 9 SSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S EE F L+ KM ++ + F +K C G Q+H ++++ G+ D +
Sbjct: 129 SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYV 188
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ LY + A K+FDE+P+R V+WN +I +R AL LF + R
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--- 245
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI---SEHGYGSKMNLCNSLIAMYSKCGSL 184
+PD T VL ACA LG+L G H ++ + + + NSLI MY KCGSL
Sbjct: 246 SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLS 242
MA +VF+GM ++D+ SW+AMI G A +G +A+ F M +R V P+ TF G+L
Sbjct: 306 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
AC+H G V++G + D M +D+ I P + HYGC+VDL+ RAG + +A ++ SM +KPD+
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 425
Query: 303 TIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-------SGDYVLLLNLYSSVGDWEK 354
IWR+LL AC + V L E + ++I K SG YVLL +Y+S W
Sbjct: 426 VIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWND 485
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +R+ M+E G++ PGCS+I + G+ HEF D SHP+ +IYQ L I+ +L+ GY
Sbjct: 486 VGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 545
Query: 415 VAEITS----ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ + + + N G++E +L HSE+LAIAFG++ PP T IR+ KNLR+C DCH
Sbjct: 546 LPDRSQAPLVDATNDGSKEY--SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 603
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S V+N E+I+RDR+RFHHF++G CSC DYW
Sbjct: 604 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
CS M L Q+HA LR Y + L ++ L S+F A ++FD I + W
Sbjct: 58 CSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMW 117
Query: 100 NVLI-SCYIRNQRTRDALCLFDN-LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
N LI +C R +A L+ L R ES PD T VL+ACA++ G+++H
Sbjct: 118 NTLIRACAHDVSRKEEAFMLYRKMLERGESS--PDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
I +HG+G + + N LI +Y CG L +A +VF MPE+ +VSW++MI L G
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYG 274
A++ F MQR+ PD T VLSAC+ G + G FL R D + ++
Sbjct: 236 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC-DVDVAMDVLVKN 293
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
++++ + G L A Q+ M K D W ++ H + +++ +
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKREN 352
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ V + L + V + R++ +
Sbjct: 353 VRPNSVTFVGLLIACNHRGFVNKGRQYFD 381
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 300/515 (58%), Gaps = 23/515 (4%)
Query: 9 SSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S EE F L+ KM ++ + F +K C G Q+H ++++ G+ D +
Sbjct: 186 SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYV 245
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ LY + A K+FDE+P+R V+WN +I +R AL LF + R
Sbjct: 246 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--- 302
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI---SEHGYGSKMNLCNSLIAMYSKCGSL 184
+PD T VL ACA LG+L G H ++ + + + NSLI MY KCGSL
Sbjct: 303 SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 362
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLS 242
MA +VF+GM ++D+ SW+AMI G A +G +A+ F M +R V P+ TF G+L
Sbjct: 363 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 422
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
AC+H G V++G + D M +D+ I P + HYGC+VDL+ RAG + +A ++ SM +KPD+
Sbjct: 423 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 482
Query: 303 TIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-------SGDYVLLLNLYSSVGDWEK 354
IWR+LL AC + V L E + ++I K SG YVLL +Y+S W
Sbjct: 483 VIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWND 542
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +R+ M+E G++ PGCS+I + G+ HEF D SHP+ +IYQ L I+ +L+ GY
Sbjct: 543 VGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 602
Query: 415 VAEITS----ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ + + + N G++E +L HSE+LAIAFG++ PP T IR+ KNLR+C DCH
Sbjct: 603 LPDRSQAPLVDATNDGSKEY--SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 660
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S V+N E+I+RDR+RFHHF++G CSC DYW
Sbjct: 661 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 695
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 153/336 (45%), Gaps = 20/336 (5%)
Query: 25 RIPTNPFACSFA------IKCCMKFCSLMGGL-QIHARVLRDGYQLDSQ---LMTTLMDL 74
RIP + S A I + CS M L Q+HA LR Y + L ++ L
Sbjct: 90 RIPNLKYGSSTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQL 149
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLI-SCYIRNQRTRDALCLFDN-LNREESGCKPD 132
S+F A ++FD I + WN LI +C R +A L+ L R ES PD
Sbjct: 150 SSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS--PD 207
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T VL+ACA++ G+++H I +HG+G + + N LI +Y CG L +A +VF
Sbjct: 208 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD 267
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
MPE+ +VSW++MI L G A++ F MQR+ PD T VLSAC+ G +
Sbjct: 268 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSL 326
Query: 253 GM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G FL R D + ++ ++++ + G L A Q+ M K D W ++
Sbjct: 327 GTWAHAFLLRKC-DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMI 384
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
H + +++ + + V + L
Sbjct: 385 LGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 420
>gi|77548549|gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/450 (41%), Positives = 279/450 (62%), Gaps = 9/450 (2%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC------ 117
D L L+D+++ + K+FD I D AWN L+S Y R R RD C
Sbjct: 176 DRVLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYAR-LRARDVACASSAAD 234
Query: 118 -LFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ + R S KP+++T + V+ AC LGA+ G H Y + + +L+
Sbjct: 235 AILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALV 294
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+ CG L +A +VF ++D ++AM+ GLA++GHGR A+ F M GV D
Sbjct: 295 EMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMHGEGVPVDGV 354
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T V+ AC+H GLVDEG+ + DRM +FGI P+I HYGC+VD+L RAG L+ A +LI
Sbjct: 355 TVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRLNDAEKLIHG 414
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M + P++ I+R+L+ AC IH + LG+++I L+ L+ +SG++VL+ N Y++ W+
Sbjct: 415 MPIVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEPDDSGNHVLISNFYATTNRWDDA 474
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
K+ R+ M G+ +PG S + + GV+HEF+V D +HP EIY M+++I +L G+
Sbjct: 475 KKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEIYAMVEDIETRLSECGHR 534
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ +S L ++ E+K +ALSYHSE+LAIAF ++A+ PG IR+ KNLR+C DCH AK++
Sbjct: 535 SSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLV 594
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S VY RE+++RDR RFHHFR+G CSC D+W
Sbjct: 595 SRVYGREIVMRDRTRFHHFRDGVCSCGDFW 624
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
SS+ + +F +M I N I C + ++ G+ H ++ ++ +
Sbjct: 230 SSAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIV 289
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T L+++Y+ + A ++F RDT +N ++ + R AL LFD ++ E
Sbjct: 290 ATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMHGE-- 347
Query: 128 GCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G D VT L V+ ACAH G ++ G + R E G + ++ M S+ G L
Sbjct: 348 GVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRLND 407
Query: 187 AFEVFKGMP 195
A ++ GMP
Sbjct: 408 AEKLIHGMP 416
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG-------- 208
+++ H L +L+ ++++CG + +VF + D+ +W+A++S
Sbjct: 166 KFLGAHAASCDRVLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYARLRARD 225
Query: 209 LAMNGHGRDAI-ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
+A DAI E F M + P++ T V+ AC G V G ++ + +
Sbjct: 226 VACASSAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHG-VWAHTYAVKRRLA 284
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
N +V++ G LD A Q+ + + D+ + +L +H H
Sbjct: 285 VNCIVATALVEMYAGCGRLDLAEQVFAAASDR-DTRCYNAMLHGLAVHGH 333
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 300/515 (58%), Gaps = 23/515 (4%)
Query: 9 SSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S EE F L+ KM ++ + F +K C G Q+H ++++ G+ D +
Sbjct: 120 SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYV 179
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ LY + A K+FDE+P+R V+WN +I +R AL LF + R
Sbjct: 180 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--- 236
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI---SEHGYGSKMNLCNSLIAMYSKCGSL 184
+PD T VL ACA LG+L G H ++ + + + NSLI MY KCGSL
Sbjct: 237 SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 296
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--QRAGVFPDDQTFTGVLS 242
MA +VF+GM ++D+ SW+AMI G A +G +A+ F M +R V P+ TF G+L
Sbjct: 297 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 356
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
AC+H G V++G + D M +D+ I P + HYGC+VDL+ RAG + +A ++ SM +KPD+
Sbjct: 357 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 416
Query: 303 TIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-------SGDYVLLLNLYSSVGDWEK 354
IWR+LL AC + V L E + ++I K SG YVLL +Y+S W
Sbjct: 417 VIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWND 476
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +R+ M+E G++ PGCS+I + G+ HEF D SHP+ +IYQ L I+ +L+ GY
Sbjct: 477 VGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 536
Query: 415 VAEITS----ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ + + + N G++E +L HSE+LAIAFG++ PP T IR+ KNLR+C DCH
Sbjct: 537 LPDRSQAPLVDATNDGSKEY--SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 594
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S V+N E+I+RDR+RFHHF++G CSC DYW
Sbjct: 595 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 629
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
CS M L Q+HA LR Y + L ++ L S+F A ++FD I + W
Sbjct: 49 CSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMW 108
Query: 100 NVLI-SCYIRNQRTRDALCLFDN-LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
N LI +C R +A L+ L R ES PD T VL+ACA++ G+++H
Sbjct: 109 NTLIRACAHDVSRKEEAFMLYRKMLERGESS--PDKHTFPFVLKACAYIFGFSEGKQVHC 166
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
I +HG+G + + N LI +Y CG L +A +VF MPE+ +VSW++MI L G
Sbjct: 167 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 226
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYG 274
A++ F MQR+ PD T VLSAC+ G + G FL R D + ++
Sbjct: 227 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC-DVDVAMDVLVKN 284
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
++++ + G L A Q+ M K D W ++ H + +++ +
Sbjct: 285 SLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKREN 343
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ V + L + V + R++ +
Sbjct: 344 VRPNSVTFVGLLIACNHRGFVNKGRQYFD 372
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 301/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF +M ++ F S + C +++ Q+H ++
Sbjct: 128 MIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLA 187
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
S + T +D+Y+ +AC +F+ +P++ +V W+ L + +++N + LCLF
Sbjct: 188 LDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQ 247
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G + + T +L CA L + G ++H I +HG+ + + SL+ +Y+K
Sbjct: 248 STQRE--GMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAK 305
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + ++EVF M EK+VV W+AMI+ + + H +A+ F MQ+ G+FP++ T+ +
Sbjct: 306 CGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSI 365
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV+EG + + + D PN+ HY C+VD+LGR+G D+A++L+ M +P
Sbjct: 366 LSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEP 425
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++W +LLG+ RIHK++ L E L L+ + G++VLL N+Y++ G+WE V R+
Sbjct: 426 TASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARK 485
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
++ + G + G S I KG +H FV + HP I ++Y L+EI +++ + A
Sbjct: 486 YLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQC 545
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH++ A++K L +HSEKLA AFG+++ PP I + KNLRIC DCH+F K++S +
Sbjct: 546 DLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITE 605
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+VI+RD RFHHF++G CSC D+W
Sbjct: 606 RQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 12/346 (3%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+R +R + F ++ C K SL+ G H + G D+ L++LY+ +
Sbjct: 47 VRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQ 106
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
+ A ++FD + R ++WN +I+ Y N+ +AL LF ++RE G + + T L
Sbjct: 107 NDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHRE--GTQMTEFTLSSTL 164
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
ACA A+ +++H + S + + + +Y+KC + A VF+ MPEK V
Sbjct: 165 CACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSV 224
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
+WS++ +G NG + + F + QR G+ + T + +LS C+ L+ EG +
Sbjct: 225 TWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVI 284
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
K G N+ +VD+ + G ++++Y++ M K + +W ++ + H H
Sbjct: 285 VKH-GFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEK-NVVLWNAMIASFSRHAHSWE 342
Query: 321 GERVIEHLIELKAQESGDY---VLLLNLYSSVGDWEKVKELREFMN 363
+ E K Q+ G + V L++ S+ V+E R + N
Sbjct: 343 AMILFE-----KMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFN 383
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 308/540 (57%), Gaps = 44/540 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M AY+ P+E LF +M ++ I + I C S +G + +LR
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSC----SSIGDPTLADSILRMI 284
Query: 61 YQ----LDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDA 115
Q L+S + T L+D+++ F A +FDE+ QR+ V WN++IS Y R + A
Sbjct: 285 DQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLA 344
Query: 116 LCLFDN---------------------------LNREESGC---KPDDVTCLLVLQACAH 145
LFDN L +E C +PD+VT VL AC H
Sbjct: 345 RELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGH 404
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+GAL+ + + E ++ NSLI MYSKCGS+ A +F+ M +DVVS++ +
Sbjct: 405 IGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTL 464
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
ISG A NGHG++AI+ M+ G+ PD T+ GVL+ACSH GL++EG +
Sbjct: 465 ISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA--- 521
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
P + HY C+VDLLGRAG LD+A LI SM +KP + ++ +LL A RIHK V LGE
Sbjct: 522 --PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAA 579
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
L EL+ Q G+YVLL N+Y+S G WE VK +RE M + GL+ + G S + KG VH+F
Sbjct: 580 SKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKF 639
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
V D SH + +IY++L E+ +++K G+VA+ + L ++ EEK L HSEKLAI F
Sbjct: 640 TVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICF 699
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L + GTTIRV KNLRIC+DCH K++S + RE+++RD RFH F EG CSC+DYW
Sbjct: 700 ALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+++ Y+ A + FDE+P+R V+WN + S Y + + ++AL LF + E G
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM--LEEG 253
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISE----------------HG--------- 163
PDD T ++ + +C+ +G + I R I + H
Sbjct: 254 ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIAR 313
Query: 164 -----YGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
GS+ N N +I+ Y++ G L +A E+F MP++DVVSW++MI+G A NG
Sbjct: 314 NIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESA 373
Query: 217 DAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
+IE F M + PD+ T VLSAC H G + LD + ++ I I +
Sbjct: 374 MSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLGISGFNS 432
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
++ + + G + A+++ +MG + D + TL+ + H
Sbjct: 433 LIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGH 473
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 53/314 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ YS + + LF+ + PF + IK K G HA VL+ G
Sbjct: 71 MLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK-----SGNLFHAYVLKLG 125
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + ++D+Y+ + A LF+++ +R WN +IS ++ +A+ LF+
Sbjct: 126 HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFN 185
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + S++ Y+K
Sbjct: 186 MMP-----------------------------------------ARNIITWTSMVTGYAK 204
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A F MPE+ VVSW+AM S A ++A+ F M G+ PDD T+
Sbjct: 205 MGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVT 264
Query: 241 LSACSHCG---LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+S+CS G L D + +D+ I+ N ++D+ + G L+ A + +G
Sbjct: 265 ISSCSSIGDPTLADSILRMIDQKH----IVLNSFVKTALLDMHAKFGNLEIARNIFDELG 320
Query: 298 VKPDSTIWRTLLGA 311
+ ++ W ++ A
Sbjct: 321 SQRNAVTWNIMISA 334
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 123/290 (42%), Gaps = 31/290 (10%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD---NLNREESGCKPDDVTCLLVLQAC 143
+F P D ++ ++ Y R + LF +LN +P + +++
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLN-----LRPQPFVYIYLIKLA 110
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
G L H Y+ + G+ + N+++ MY+K G + +A +F+ M E+ + W+
Sbjct: 111 GKSGNL-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWN 165
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MISG +G+ +A+ F M + T+T +++ + G ++ + D M +
Sbjct: 166 SMISGCWKSGNETEAVVLFNMMPARNII----TWTSMVTGYAKMGDLESARRYFDEMPER 221
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTL 320
++ + + + +A L M G+ PD T W + +C TL
Sbjct: 222 -----SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTL 276
Query: 321 GERVIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQ 368
+ ++ +I+ K +V LL++++ G+ E R +E G Q
Sbjct: 277 ADSILR-MIDQKHIVLNSFVKTALLDMHAKFGNLEIA---RNIFDELGSQ 322
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 291/494 (58%), Gaps = 9/494 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE + +M + + F S + + + G +IH +R G D + ++L
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + ++C++F + +RD ++WN +I+ ++N + L F + + KP
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK--IKP 338
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ ++ ACAHL L G+++H YI+ +G+ + + +SL+ MY+KCG++ A ++F
Sbjct: 339 KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIF 398
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M +D+VSW+AMI G A++G DAIE F M+ G+ VL+ACSH GLVD
Sbjct: 399 DRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI-------KAVLTACSHGGLVD 451
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M++DFGI P + HY V DLLGRAG L++AY I M + P +IW TLL A
Sbjct: 452 EAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA 511
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK++ + E+V ++E+ +G Y+LL N+YS+ W++ + R M G++ TP
Sbjct: 512 CRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTP 571
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
CS I +K V+ F+ D SHP +I + ++ + + ++ GYV + + H++ E+K
Sbjct: 572 ACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKK 631
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ HSE+LAI FG++ TP G TIRV KNLR+C DCH K +S + RE+++RD RF
Sbjct: 632 YLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRF 691
Query: 492 HHFREGRCSCNDYW 505
HHF+ G CSC DYW
Sbjct: 692 HHFKNGTCSCGDYW 705
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 147/349 (42%), Gaps = 40/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ P + F M + + +K C L G +H ++R G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 61 YQLDSQLMTTLMDLYS-----------------TFEKSFEAC---------------KLF 88
D LM++YS F++ E K+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC--KPDDVTCLLVLQACAHL 146
+ +P++D V+WN +I+ RN + L + RE G KPD T VL A
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMI----REMGGANLKPDSFTLSSVLPLIAEN 252
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G++IH G + + + +SLI MY+KC + + VF + E+D +SW+++I
Sbjct: 253 VDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSII 312
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+G NG + + F M A + P +F+ ++ AC+H + G ++++ G
Sbjct: 313 AGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GF 371
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
NI +VD+ + G + A Q+ M ++ D W ++ C +H
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALH 419
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 39/295 (13%)
Query: 51 QIHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
Q+HA+VL+ +Q ++ L+ +YS ++ +LF+ I +AW +I CY +
Sbjct: 27 QLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+L F + SG PD VL++CA L L GE +H YI G +
Sbjct: 85 GLPHQSLGSF--IGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLY 142
Query: 170 LCNSLIAMYSKCGSL----------GMAFE----------------------VFKGMPEK 197
N+L+ MYSK L G F+ +F+ MPEK
Sbjct: 143 TGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEK 202
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
D+VSW+ +I+G A NG + + M A + PD T + VL + + G +
Sbjct: 203 DLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE-I 261
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
S G+ +I+ ++D+ + + + ++ T + + D W +++ C
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL-TERDGISWNSIIAGC 315
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 308/540 (57%), Gaps = 44/540 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M AY+ P+E LF +M ++ I + I C S +G + +LR
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSC----SSIGDPTLADSILRMI 284
Query: 61 YQ----LDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDA 115
Q L+S + T L+D+++ F A +FDE+ QR+ V WN++IS Y R + A
Sbjct: 285 DQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLA 344
Query: 116 LCLFDN---------------------------LNREESGC---KPDDVTCLLVLQACAH 145
LFDN L +E C +PD+VT VL AC H
Sbjct: 345 RELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGH 404
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+GAL+ + + E ++ NSLI MYSKCGS+ A +F+ M +DVVS++ +
Sbjct: 405 IGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTL 464
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
ISG A NGHG++AI+ M+ G+ PD T+ GVL+ACSH GL++EG +
Sbjct: 465 ISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA--- 521
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
P + HY C+VDLLGRAG LD+A LI SM +KP + ++ +LL A RIHK V LGE
Sbjct: 522 --PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAA 579
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
L EL+ Q G+YVLL N+Y+S G WE VK +RE M + GL+ + G S + KG VH+F
Sbjct: 580 SKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKF 639
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
V D SH + +IY++L E+ +++K G+VA+ + L ++ EEK L HSEKLAI F
Sbjct: 640 TVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICF 699
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L + GTTIRV KNLRIC+DCH K++S + RE+++RD RFH F EG CSC+DYW
Sbjct: 700 ALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+++ Y+ A + FDE+P+R V+WN + S Y + + ++AL LF + E G
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM--LEEG 253
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISE----------------HG--------- 163
PDD T ++ + +C+ +G + I R I + H
Sbjct: 254 ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIAR 313
Query: 164 -----YGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
GS+ N N +I+ Y++ G L +A E+F MP++DVVSW++MI+G A NG
Sbjct: 314 NIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESA 373
Query: 217 DAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
+IE F M + PD+ T VLSAC H G + LD + ++ I I +
Sbjct: 374 MSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLGISGFNS 432
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
++ + + G + A+++ +MG + D + TL+ + H
Sbjct: 433 LIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGH 473
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 53/314 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ YS + + LF+ + PF + IK K G HA VL+ G
Sbjct: 71 MLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK-----SGNMFHAYVLKLG 125
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + ++D+Y+ + A LF+++ +R WN +IS ++ +A+ LF+
Sbjct: 126 HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFN 185
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + S++ Y+K
Sbjct: 186 MMP-----------------------------------------ARNIITWTSMVTGYAK 204
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A F MPE+ VVSW+AM S A ++A+ F M G+ PDD T+
Sbjct: 205 MGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVT 264
Query: 241 LSACSHCG---LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+S+CS G L D + +D+ I+ N ++D+ + G L+ A + +G
Sbjct: 265 ISSCSSIGDPTLADSILRMIDQKH----IVLNSFVKTALLDMHAKFGNLEIARNIFDELG 320
Query: 298 VKPDSTIWRTLLGA 311
+ ++ W ++ A
Sbjct: 321 SQRNAVTWNIMISA 334
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 124/290 (42%), Gaps = 31/290 (10%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD---NLNREESGCKPDDVTCLLVLQAC 143
+F P D ++ ++ Y R + LF +LN +P + +++
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLN-----LRPQPFVYIYLIKL- 109
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A + G H Y+ + G+ + N+++ MY+K G + +A +F+ M E+ + W+
Sbjct: 110 ----AGKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWN 165
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MISG +G+ +A+ F M + T+T +++ + G ++ + D M +
Sbjct: 166 SMISGCWKSGNETEAVVLFNMMPARNII----TWTSMVTGYAKMGDLESARRYFDEMPER 221
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTL 320
++ + + + +A L M G+ PD T W + +C TL
Sbjct: 222 -----SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTL 276
Query: 321 GERVIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQ 368
+ ++ +I+ K +V LL++++ G+ E R +E G Q
Sbjct: 277 ADSILR-MIDQKHIVLNSFVKTALLDMHAKFGNLEIA---RNIFDELGSQ 322
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 297/506 (58%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ SS E F +++ I +P ++ C S+ Q+H+ +R+G
Sbjct: 437 IIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNG 496
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD L ++D+Y + A +F+ + ++D V W +++C+ N +A+ LF
Sbjct: 497 L-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFG 555
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G +PD V + +L A A L +L G++IH ++ + + + +SL+ MYS
Sbjct: 556 KM--LNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSG 613
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +VF KDVV W+AMI+ M+GHG+ AI F M GV PD +F +
Sbjct: 614 CGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLAL 673
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH LVDEG +LD M + + P HY CVVDLLGR+G ++AY+ I SM ++P
Sbjct: 674 LYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEP 733
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
S +W LLGACRIHK+ L + L+EL+ G+YVL+ N+++ +G W VKE+R
Sbjct: 734 KSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRT 793
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG-YVAEIT 419
M E+GL+ P CS I + VH F D SH I+ L EI ++L+ G YV + +
Sbjct: 794 KMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTS 853
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ EEK + L HSE+LAI+FG+++T GT +R+AKNLR+C DCH F K++S ++
Sbjct: 854 FVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLF 913
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC D+W
Sbjct: 914 EREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 168/371 (45%), Gaps = 36/371 (9%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M+ N + ++ C + L G ++HA +L+ G + + Q L+
Sbjct: 248 EALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALL 306
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+Y+ A ++F EI +D ++WN ++SCY++N+ +A+ F + ++G PD
Sbjct: 307 VMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEM--VQNGFNPD 364
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ +L A HLG L G ++H Y + S + + N+L+ MY KC S+ + VF
Sbjct: 365 HACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFD 424
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS------- 245
M KD VSW+ +I+ A + +AI F Q+ G+ D +L ACS
Sbjct: 425 RMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISL 484
Query: 246 ----HCGLVDEGMMFL---DRMSKDFGIL---------------PNIHHYGCVVDLLGRA 283
H + G++ L +R+ +G +I + +V+
Sbjct: 485 LKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAEN 544
Query: 284 GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV 340
GLL +A L M G++PDS +LGA +T G+ + LI K G V
Sbjct: 545 GLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVV 604
Query: 341 -LLLNLYSSVG 350
L+++YS G
Sbjct: 605 SSLVDMYSGCG 615
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 150/322 (46%), Gaps = 19/322 (5%)
Query: 49 GLQIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
G Q+HA + G D L T L+ +Y + +A +LFD +P R +WN LI
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133
Query: 106 YIRNQRTRDALCLFDNLNREE--SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ + +A+ ++ + E +G PD T VL+AC G G ++H + G
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESF 222
+ N+L+ MY+KCG L A VF+ M + +DV SW++ ISG NG +A++ F
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDL 279
MQ G + T GVL C+ ++ G L + +F I N ++ +
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN-----ALLVM 308
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGD 338
R G +D A ++ +G K D W ++L +C + L I+ E+ + D
Sbjct: 309 YARCGWVDSALRVFREIGDK-DYISWNSML-SCYVQNR--LYAEAIDFFGEMVQNGFNPD 364
Query: 339 YVLLLNLYSSVGDWEKVKELRE 360
+ +++L S+VG ++ RE
Sbjct: 365 HACIVSLLSAVGHLGRLINGRE 386
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-- 227
L L+ MY KCG L A +F GMP + V SW+A+I +G +A+ + AM+
Sbjct: 95 LATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASE 154
Query: 228 --AGVFPDDQTFTGVLSAC-----SHCGLVDEGMMF---LDRMSKDFGILPNIHHYGCVV 277
AG PD T VL AC CG G+ LDR + ++ N +V
Sbjct: 155 PVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRST----LVAN-----ALV 205
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
+ + GLLD A ++ M D W + + C +E L + +S
Sbjct: 206 GMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC------VQNGMFLEALDLFRRMQSD 259
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
+ +N Y++VG + EL + + + L
Sbjct: 260 GFS--MNSYTTVGVLQVCAELAQLNHGRELHAA 290
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 299/540 (55%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y S E F LF +M +R+P + F + + C G +H +++R
Sbjct: 265 MISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQ 324
Query: 59 ------DGYQLDSQLMT------------------TLMDL--YSTFEKSF-------EAC 85
+++ L+T TL D+ ++T + +A
Sbjct: 325 PNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAV 384
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F+E+P ++ ++W V++S Y+ DAL LF+ + E KP D T + AC
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSEN--VKPCDYTYAGAIAACGE 442
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G+++H +I + G+ + N+LI MY++CG++ A +F MP D VSW+AM
Sbjct: 443 LGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAM 502
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS L +GHGR+A+E F M G++PD +F VL+AC+H GLVDEG + + M +DFG
Sbjct: 503 ISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFG 562
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P HY ++DLLGRAG + +A LI +M +P +IW +L CR + LG
Sbjct: 563 IIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAA 622
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L ++ Q G Y+LL N YS+ G W +R+ M ++G++ PGCS I VH F
Sbjct: 623 DQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVF 682
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+V D HP +E+Y+ L+ + +++ GYV + LH++ +K + L HSE+LA+ F
Sbjct: 683 LVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGF 742
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L PPG T+ V KNLRIC DCH +S RE+++RD RFHHF++G CSC +YW
Sbjct: 743 GLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 46/341 (13%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
T+L+ Y+ ++ A FD +P +RDTV N +IS Y R A+ +F +L
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGE--KIHRYISEHGYGSKMNLCNSLIAMYSKC--- 181
S +PDD + +L A HL + ++H + + G G +++CN+L+A+Y KC
Sbjct: 152 S-LRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210
Query: 182 -------------------------------GSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G +G A VF+ + K V W+AMISG
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LDRMSKDFGIL 267
+G +A E F M V D+ TFT VLSAC++ GL G + R+ +F
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ +V + G + A ++ +M +K D W T+L + + ++ +E
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLK-DVVSWNTILSG---YVESSCLDKAVEV 386
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
E+ + ++++++ Y G E +L M + ++
Sbjct: 387 FEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVK 427
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/494 (37%), Positives = 291/494 (58%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E + +M + + F S + + + G+ +H +++G+ D + ++L
Sbjct: 152 QEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSL 211
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + + K+FD D V WN +++ Y +N +AL +F + ++G +P
Sbjct: 212 IDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRM--LQAGVRP 269
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
VT ++ A +L L G+++H Y+ + + + +SLI MY KCG++ +A VF
Sbjct: 270 VPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVF 329
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
G+ D+VSW+AMI G A++G +A F M+ V P+ TF VL+ACSH GLVD
Sbjct: 330 NGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVD 389
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + + MS +G +P++ H + D LGRAG LD+AY I+ M +KP S++W TLL A
Sbjct: 390 NGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA 449
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK+ L E V + + EL+ + G +V+L N+YS+ G W + +LR+ M KG++ P
Sbjct: 450 CRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEP 509
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
CS I +K +H F+ D SHP + I L+ ++Q+ GYV + L ++ E+K
Sbjct: 510 ACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKR 569
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L HSEKLAI FG+++TPPGTTIRV KNLR+CVDCH K +S + RE+++RD RF
Sbjct: 570 EVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRF 629
Query: 492 HHFREGRCSCNDYW 505
H F++G CSC D+W
Sbjct: 630 HRFKDGNCSCGDFW 643
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 41/348 (11%)
Query: 4 AYSMSSSPEEGFYL-----FEKMRQKRIPTN--PFACSFAIKCC--MKFCSLMGGLQIHA 54
AY + + +G +L F +MR P + P + A+K C + C+L L HA
Sbjct: 16 AYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASL--HA 73
Query: 55 RVLRDGYQLDSQLMTTLMDL----------YSTFEKSFEAC----------KLFDEIPQR 94
+R G D L++L + T S E K+FDE+ +R
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D V+WN LI ++R ++AL + + R+ G PD T VL A ++ G
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRD--GFMPDTFTLSTVLPIFAECADIKRGMV 191
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H Y ++G+ + + + +SLI MY+ C + + +VF + D V W++M++G A NG
Sbjct: 192 VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGS 251
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIH 271
+A+ F M +AGV P TF+ ++ A + L+ G +L R + NI
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN----DNIF 307
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
++D+ + G +D A ++ + PD W ++ +H T
Sbjct: 308 ISSSLIDMYCKCGNVDIARRVFNGIQ-SPDIVSWTAMIMGYALHGPTT 354
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + S EE +F +M Q + P S I L G Q+HA ++R
Sbjct: 242 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 301
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + ++L+D+Y A ++F+ I D V+W +I Y + T +A LF+
Sbjct: 302 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 361
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ E KP+ +T L VL AC+H G ++ G K +S ++G+ + C +L
Sbjct: 362 RM--ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLG 419
Query: 180 KCGSLGMAFEVFKGMPEKDVVS-WSAMI 206
+ G L A+ M K S WS ++
Sbjct: 420 RAGDLDEAYNFISEMKIKPTSSVWSTLL 447
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 275/437 (62%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T ++ + F K A K F+E+P ++ V WN +I+ YI N + + L LF + ESG
Sbjct: 165 TAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRM--VESG 222
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+P+ + VL C++L AL+ G+++H+ I + + SL++MY KCG L A+
Sbjct: 223 FRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAW 282
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
++F MP+KDVV+W+AMISG A +G G A+ F M+ G+ PD TF VLSAC+H G
Sbjct: 283 KLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAG 342
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
VD G+ + + M +D+G+ HY CVVDLLGR G L +A LI M KP S I+ TL
Sbjct: 343 FVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTL 402
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGACRIHK++ L E ++L+ L + + YV L N+Y+++ W+ V +R M + +
Sbjct: 403 LGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVI 462
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
TPG S I +K VVHEF D HP + I++ L+E+ +++++AGYV ++ LH++G E
Sbjct: 463 KTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEE 522
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
+K L HSEKLAIA+G++ P GT IRV KNLR+C DCH+ K +S + R +I+RD
Sbjct: 523 QKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDT 582
Query: 489 LRFHHFREGRCSCNDYW 505
RFHHFR+G CSC DYW
Sbjct: 583 TRFHHFRQGECSCGDYW 599
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E G LF++M + NP + S + C +L G Q+H + +
Sbjct: 198 MIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSP 257
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T+L+ +Y +A KLF +PQ+D V WN +IS Y ++ AL LFD
Sbjct: 258 VSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFD 317
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G KPD +T + VL AC H G ++ G E + + ++G +K + ++ +
Sbjct: 318 KMRDE--GMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLG 375
Query: 180 KCGSLGMAFEVFKGMPEK 197
+ G L A ++ K MP K
Sbjct: 376 RGGKLVEAVDLIKKMPFK 393
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 52/289 (17%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD IP+ D ++N++++CY+ N A FD + +++
Sbjct: 56 ARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTAS-------------- 101
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
N++I+ +S+ G + A E+F MP ++ VSW+
Sbjct: 102 ---------------------------WNTMISGFSQNGMMDQARELFLVMPVRNSVSWN 134
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMISG +G A + F V +T +++ G ++ + + M
Sbjct: 135 AMISGYVESGDLDLAKQLFEVAPVRSVV----AWTAMITGFMKFGKIELAEKYFEEMPMK 190
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ N G + + GL + ++ + G +P+ + ++L C + LG++
Sbjct: 191 NLVTWNAMIAGYIENCQAENGL--KLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQ 248
Query: 324 VIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQT 369
V H + K+ S + LL++Y GD E +L M +K + T
Sbjct: 249 V--HQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVT 295
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N +I + + G L A VF+ M K V+W++M++G + N G+ + A Q
Sbjct: 9 NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYS-NRRGKIKV----ARQLFDRI 63
Query: 232 PDDQTFT-GVLSACS-HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
P+ F+ ++ AC H V+ +F D+M + + + ++ + G++DQA
Sbjct: 64 PEPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFSQNGMMDQA 118
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+L M V+ +S W ++ + L +++ E
Sbjct: 119 RELFLVMPVR-NSVSWNAMISGYVESGDLDLAKQLFE 154
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/506 (38%), Positives = 290/506 (57%), Gaps = 24/506 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + L ++M ++ + + A + + C + SL G +H + +
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + LMD+Y+ A +F + +D ++WN +I
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---------------- 426
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
KPD T VL ACA L ALE G++IH YI +GY S ++ N+L+ +Y K
Sbjct: 427 -------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG LG+A +F +P KD+VSW+ MI+G M+G+G +AI +F M+ AG+ PD+ +F +
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G F M DF I P + HY C+VDLL R G L +AY+ I ++ + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CR + + L E+V E + EL+ + SG YVLL N+Y+ WE+VK LRE
Sbjct: 600 DATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLRE 659
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVV-DDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ ++GL+ PGCS I +KG V+ FV ++ SHP I +L ++ +++K G+ +
Sbjct: 660 KIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTK 719
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N +K AL HSEKLA+AFG+L PP TIRV KNLR+C DCH AK +S
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC +W
Sbjct: 780 RREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
E +FE LFD++ RD ++WN +IS Y+ N T L ++ + G D T +
Sbjct: 202 ESAFE---LFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY--LGIDVDLATIIS 256
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL CA+ G L G+ +H + + ++N N+L+ MYSKCG L A VF+ M E++
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 316
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW++MI+G +G AI+ M++ GV D T +L AC+ G +D G D
Sbjct: 317 VVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 376
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ + + N+ ++D+ + G ++ A + ++M VK D W T++G +
Sbjct: 377 YIKAN-NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Query: 319 TLGERVIEHLIELKAQESGDYV---LLLNLYSS 348
V+ L A E G + +L N YSS
Sbjct: 435 MAC--VLPACASLSALERGKEIHGYILRNGYSS 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 28/332 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E G ++++M I + + C +L G +H+ ++
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ TL+D+YS A ++F+++ +R+ V+W +I+ Y R+ R+ A+ L
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G K D V +L ACA G+L+ G+ +H YI + S + +CN+L+ MY+K
Sbjct: 342 QMEKE--GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M KD++SW+ MI L PD +T V
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGELK---------------------PDSRTMACV 438
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ ++ G + ++ G + H +VDL + G+L A +L+ M
Sbjct: 439 LPACASLSALERGKEIHGYILRN-GYSSDRHVANALVDLYVKCGVLGLA-RLLFDMIPSK 496
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
D W ++ +H + G I E++
Sbjct: 497 DLVSWTVMIAGYGMHGY---GNEAIATFNEMR 525
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 113/286 (39%), Gaps = 31/286 (10%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VLQ CA L + G+K+H I + G L L++ Y+ CG L VF M +K+
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+ M+S A G +++I F M G+ + D
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRP---------------ESAFELFD 209
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ I N G V + L GL Y+ + +G+ D ++L C +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGL--GIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 319 TLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
+LG+ V I+ + ++ LL++YS GD + + E M E+ + +
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV--------VS 319
Query: 378 LKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
++ + D S I + QM E + V ITS LH
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKE-----GVKLDVVAITSILH 360
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/481 (42%), Positives = 285/481 (59%), Gaps = 9/481 (1%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVL--RDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
A C +K +G L RV LD T++ Y A ++F
Sbjct: 113 LAHPVVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAAREVF 172
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
+P+R V+W+ +I +R +AL +FD + +G KPD V + VL+ CAHLGA
Sbjct: 173 VRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMT--GNGFKPDAVVLVSVLKTCAHLGA 230
Query: 149 LEFGEKIHRYISEHGYGSK---MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LE G +HR++ G + + L +L+ MY KCG + A+ VF G+ DVV W+AM
Sbjct: 231 LERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAM 290
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I GLAMNGHG+ A+E F M G P++ TF L AC H G VDEG M +D G
Sbjct: 291 IGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSM-RDHG 349
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P HYGC+ DLLGRAGLL++A ++ M ++P ++ W L+ +C +H +V +GERV
Sbjct: 350 IEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVG 409
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ LIEL+ + G YV L NLY+ G WE K LR+ M E+G + G S I G+VHEF
Sbjct: 410 KKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEF 469
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIA 444
D HP+ IY +L+++ ++L++ GYV + + L ++ EE KGN LSYHSE+LA+A
Sbjct: 470 RSGDTRHPQTRLIYALLEDMEQRLQLIGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALA 529
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG+L P IR+ KNLR+C DCH AK++S +Y RE+I+RDR RFH FR+G CSCND+
Sbjct: 530 FGILNIPHDMPIRIVKNLRVCRDCHVHAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDF 589
Query: 505 W 505
W
Sbjct: 590 W 590
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 298/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E F+ M+ I + + AI C ++ G QIH+RV G
Sbjct: 417 MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + L++LY+ +S EA LF+ I +D + WN ++S + ++ +AL +F
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVF- 535
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G K + T + + A A+L ++ G++IH + + G S+ + N+LI++Y K
Sbjct: 536 -IKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGK 594
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F M E++ VSW+ +I+ + +G G +A++ F M++ G+ P+D TF GV
Sbjct: 595 CGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGV 654
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV+EG+ + MS + GI P HY CVVD+LGRAG LD+A + + M V
Sbjct: 655 LAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSA 714
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +WRTLL ACR+HK++ +GE ++L+EL+ +S YVLL N Y+ G W +R+
Sbjct: 715 NAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRK 774
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I +K VVH F V D HP ++IY+ L +++ +L GY+
Sbjct: 775 MMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYF 834
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H E+K HSEKLA+AFG+++ PP +RV KNLR+C DCH + K S V
Sbjct: 835 LFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMG 894
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC D+W
Sbjct: 895 REIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 188/397 (47%), Gaps = 51/397 (12%)
Query: 11 PEEGFYLFE-KMRQKR-IPTNPFACSFAIKCC---MKFCSLMGGLQIHARVLRDGYQLDS 65
PE+ LF K+RQ R + + FAC A++ C +K L+ IHA+ + G D
Sbjct: 22 PEKLLSLFAAKVRQCRGLGSVDFAC--ALRECRGSVKHWPLVP--VIHAKAITCGLGEDR 77
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
L+DLY+ A ++F+++ RD V+W ++S Y RN +A+ L+ ++
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHC- 136
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
SG P VL AC E G +H + + G S+ + N+LIA+Y + GSL
Sbjct: 137 -SGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLS 195
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+A VF MP D V+++ +IS A G+G A+E F M+ +G PD T +L+AC+
Sbjct: 196 LAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACA 255
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS---------- 295
G +++G + K G+ P+ G ++DL + G++ +A ++ S
Sbjct: 256 SIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWN 314
Query: 296 ------------------------MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
GV+P+ + LL C + LGE++ HL+ +
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI--HLLSI 372
Query: 332 KAQ-ESGDYV--LLLNLYSSVGDWEKVKELREFMNEK 365
K ES YV +L+++YS G +K + + E + K
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK 409
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 171/375 (45%), Gaps = 9/375 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + E +FE+MR + + + C L G Q+H+ +L+ G
Sbjct: 215 LISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAG 274
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + +L+DLY EA ++F + + V WN+++ Y + + LF
Sbjct: 275 MSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFC 334
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G +P++ T +L+ C + G + GE+IH + G+ S M + LI MYSK
Sbjct: 335 QM--VAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSK 392
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A + + + KDVVSW++MI+G + ++A+E+F MQ G++PD+
Sbjct: 393 YGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASA 452
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC+ + +G R+ G ++ + +V+L R G +A+ L ++ K
Sbjct: 453 ISACAGIKAMRQGQQIHSRVYVS-GYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK- 510
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D W ++ L E +E I K ++G + SS+ + ++++
Sbjct: 511 DKITWNGMVSG---FAQSGLYEEALEVFI--KMYQAGVKYNVFTFVSSISASANLADIKQ 565
Query: 361 FMNEKGLQTTPGCST 375
GC++
Sbjct: 566 GKQIHATVIKTGCTS 580
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 4/316 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE L+ +M + P+ S + C K G +HA+V + G
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG 173
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+ LY F A ++F E+P D V +N LIS + + AL +F+
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFE 233
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG PD VT +L ACA +G L G+++H Y+ + G + SL+ +Y K
Sbjct: 234 EMRL--SGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVK 291
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E+FK +VV W+ M+ + + F M AGV P++ T+ +
Sbjct: 292 CGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCL 351
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L C++ G ++ G + +S G +++ G ++D+ + G LD+A +++ + K
Sbjct: 352 LRTCTYAGEINLGEQ-IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK- 409
Query: 301 DSTIWRTLLGACRIHK 316
D W +++ H+
Sbjct: 410 DVVSWTSMIAGYVQHE 425
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 302/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + P + ++ +MR+ + + I+ C ++ G +H +LR G
Sbjct: 180 MVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHG 239
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D T+L+D+Y+ AC++F + R+ V+W+ +IS + +N ++ +AL LF
Sbjct: 240 MRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFR 299
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ + SG +PD + L AC+++G L+ G +H +I + L + I MYSK
Sbjct: 300 NM--QASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSK 356
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F + ++D++ W+AMI+ +G G+DA+ F M G+ PD TF +
Sbjct: 357 CGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASL 416
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV+EG ++ M F I P HY C+VDLL R+GL+++A L+TSM +P
Sbjct: 417 LSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW LL C +K + LGE + ++++EL+ + G L+ NLY++ W+KV+++R+
Sbjct: 477 TVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRK 536
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G + PGCS+I ++G H F+++D SHP+ EI + +++ +++ GY+
Sbjct: 537 LMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEF 596
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H+L E K LSYHSEKLAIAFG+L T PGT + + KNLR+C DCH+ K +S + +
Sbjct: 597 VYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIAD 656
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 657 REIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 150/316 (47%), Gaps = 16/316 (5%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S SP +F + P + + A+ C + L GG + R GY+ D
Sbjct: 84 HSRRGSPASALRVFRALPPAARP-DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ ++L+ LY+ + +A K+FD +P+RD V W+ +++ ++ + DA+ ++ +
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-- 200
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G K D+V + V+QAC + G +H ++ HG + SL+ MY+K G L
Sbjct: 201 REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
+A VF M ++ VSWSAMISG A NG +A+ F MQ +G+ PD L AC
Sbjct: 261 DVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV-----VDLLGRAGLLDQAYQLITSMGVK 299
S+ G FL G + + C+ +D+ + G L A Q++ +M
Sbjct: 321 SNIG-------FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASA-QMLFNMISD 372
Query: 300 PDSTIWRTLLGACRIH 315
D +W ++ C H
Sbjct: 373 RDLILWNAMIACCGAH 388
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+PD T L L ACA LG L GE + + GY + +C+SL+ +Y++ G++G A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-- 245
+VF MP +D V+WS M++G G DAI+ + M+ GV D+ GV+ AC+
Sbjct: 163 VKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222
Query: 246 ---------HCGLVDEGMM-----------------FLDRMSKDFGIL--PNIHHYGCVV 277
H L+ GM LD + FG++ N + ++
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282
Query: 278 DLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV 324
+ G D+A +L +M G++PDS + L AC + LG V
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSV 332
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 295/506 (58%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ Y+ SS P +M+ +P N CS + C K SL G ++H ++R+
Sbjct: 451 LIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSL-LSACSKLKSLRLGKEVHGFIIRN 509
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + +++ LY + LFD + V+WN +I+ +++N AL LF
Sbjct: 510 WLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLF 569
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ G +P ++ + V AC+ L +L G + H Y +H + S+I MY+
Sbjct: 570 RQMVL--YGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYA 627
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G++ + +VF G+ EK SW+AMI G M+G ++AI+ F MQR G PDD TF G
Sbjct: 628 KNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLG 687
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+AC+H GL+ EG+ +LD+M FG+ PN+ HY CV+D+LGRAG LD A ++ M +
Sbjct: 688 VLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEE 747
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IW +LL CRIH+++ +GE+V L L+ ++ +YVLL NLY+ +G W+ V+++R
Sbjct: 748 PDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVR 807
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E L+ GCS I L G V FVV + EI + + ++ GY + +
Sbjct: 808 QRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTS 867
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S H+L EEK L HSEKLAI +G++ T GTT+RV KNLRICVDCHN AK++S V
Sbjct: 868 SVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVM 927
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF +G CSC DYW
Sbjct: 928 EREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 39/310 (12%)
Query: 63 LDSQLMTT--LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD +L+ LMD+YS + ++ +F ++ V+WN ++ + L
Sbjct: 307 LDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLR 366
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ K D+VT L + C L +++H Y + + L N+ +A Y+K
Sbjct: 367 QMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAK 426
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A VF G+ K + SW+A+I G A + R ++++ M+ +G+ PD+ T +
Sbjct: 427 CGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSL 486
Query: 241 LSACS-----HCGLVDEGMMFLDRMSKD----FGILPNIHHYG--CVVDLLGRA------ 283
LSACS G G + + + +D +L H G C V +L A
Sbjct: 487 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSL 546
Query: 284 -------------GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGER---- 323
G ++A L M G++P T+ GAC + + LG
Sbjct: 547 VSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAY 606
Query: 324 VIEHLIELKA 333
++HL+E A
Sbjct: 607 ALKHLLEDNA 616
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTN-PFACSFAIKCCMKFCSLMGGLQIHARVL 57
++ +YS + E +F KM K +P N F C IK C + GL +H V+
Sbjct: 157 VISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPC--VIKACAGISDVGIGLAVHGLVV 214
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+ G D + L+ Y T +A KLFD +P+R+ V+WN +I + N
Sbjct: 215 KTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG------- 267
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
++ PD T + VL CA + G+ +H + + ++ + N+L+ M
Sbjct: 268 -------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDM 320
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG--HG 215
YSK G + + +FK K+VVSW+ M+ G + G HG
Sbjct: 321 YSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHG 360
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 33/307 (10%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T ++ +Y+ ++ FD + ++ WN +IS Y RN+ + L +F +
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKM- 177
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
++ PD+ T V++ACA + + G +H + + G + + N+L++ Y G
Sbjct: 178 ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGF 237
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ A ++F MPE+++VSW++MI + NG PD T VL
Sbjct: 238 VSDALKLFDIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDVATVVTVLPV 285
Query: 244 CSHCGLVDEG--------MMFLDR-MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
C+ + G + LD+ + + ++ +GC++D Q+I
Sbjct: 286 CAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID-----------SQMIF 334
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+ + W T++G + ++ ++ D V +LN D
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESV 394
Query: 355 VKELREF 361
+ L+E
Sbjct: 395 LPSLKEL 401
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 138 LVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L+LQA +E G KIH +S S LC +I MY+ CGS + F +
Sbjct: 89 LLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEGM- 254
K++ W+A+IS + N + +E F M + + PD+ TF V+ AC+ G+ D G+
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACA--GISDVGIG 206
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ + + G++ ++ +V G G + A +L M
Sbjct: 207 LAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIM 248
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 298/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS P + F +M + N F S IK G Q+H ++ G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + L+DLY+ + +A +FD + R+ V+WN LI+ + R T AL LF
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G +P + + AC+ G LE G+ +H Y+ + G N+L+ MY+K
Sbjct: 252 GMLRD--GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A ++F + ++DVVSW+++++ A +G G++A+ F M+R G+ P++ +F V
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL+DEG + + M KD GI+P HY VVDLLGRAG L++A + I M ++P
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ IW+ LL ACR+HK+ LG EH+ EL + G +V+L N+Y+S G W +R+
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E G++ P CS + ++ +H FV +D HP+ EI + +E+ ++K GYV + +
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 548
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ +E+ L YHSEK+A+AF +L TPPG+TI + KN+R+C DCH K+ S V
Sbjct: 549 VIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVG 608
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 609 REIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
IP + + +K C F L+ G +HA +L+ ++ D + TL+++Y+ EA
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
K+F+++PQRD V W LIS Y ++ R DAL F+ + R G P++ T V++A A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR--FGYSPNEFTLSSVIKAAAA 173
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
G ++H + + G+ S +++ ++L+ +Y++ G + A VF + ++ VSW+A+
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+G A A+E F M R G P ++ + ACS G +++G M K
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
L ++D+ ++G + A ++ + K D W +LL A H
Sbjct: 294 KLVAFAG-NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ C L G +H +I + + + + N+L+ MY+KCGSL A +VF+ MP++D
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH-----CGLVDEG 253
V+W+ +ISG + + DA+ F M R G P++ T + V+ A + CG G
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
G N+H ++DL R GL+D A + ++ + D + W L+
Sbjct: 186 FCV------KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAG-- 236
Query: 314 IHKHVTLGERVIE 326
H + E+ +E
Sbjct: 237 -HARRSGTEKALE 248
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/425 (45%), Positives = 274/425 (64%), Gaps = 8/425 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LF+E+P RD V+WN ++S N+R +ALCLF + E G P+ T L L AC
Sbjct: 125 ARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAE--GFAPNRGTVLSALAAC 182
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMN--LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
A GALE G+ IH ++ + L +L+ MY+KCG++ +A +VF + ++ +
Sbjct: 183 AGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRNTCT 242
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
W+AMI+GLAMNG+ A++ F M+ V PD+ TF GVL ACSH G VD G +
Sbjct: 243 WNAMINGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHFHMI 302
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
K +GI + HY C+VDLL R+G L +A+++I M +KPD+ +WR LLG CR+HK V +
Sbjct: 303 EKKYGIRLILEHYACMVDLLARSGHLQEAHKIIAGMPMKPDAVVWRALLGGCRLHKDVKM 362
Query: 321 GERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKG 380
E I E++A SGD+VLL NLY++VG W V+++R M KG++ PGCS+I +
Sbjct: 363 AETAIS---EMEATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKIPGCSSIEIND 419
Query: 381 VVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEK 440
+HEFV D SHP N+I+ L EI+ +++ GYV E +++ EEK AL +HSEK
Sbjct: 420 SIHEFVSGDKSHPSYNDIHAKLAEISARMQQQGYVTETAEVFYDVEEEEKEQALGHHSEK 479
Query: 441 LAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCS 500
LAIAFG++ PP IR+ KNLR C DCH FAK++S +Y+ E+++RDR RFHHF EG CS
Sbjct: 480 LAIAFGLIGGPPNVAIRIVKNLRFCADCHKFAKLVSQIYHWEIVVRDRARFHHFTEGACS 539
Query: 501 CNDYW 505
CND+W
Sbjct: 540 CNDFW 544
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + P E LF +M + N A+ C +L G IHA V R
Sbjct: 143 MMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLSALAACAGAGALETGKWIHAFVERKR 202
Query: 61 Y--QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D L T L+D+Y+ A +F ++ R+T WN +I+ N + AL +
Sbjct: 203 LFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRNTCTWNAMINGLAMNGYSAKALDM 262
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS--LIA 176
F + + + PD+VT + VL AC+H G ++ G + H ++ E YG ++ L + ++
Sbjct: 263 FRKMELDRT-VVPDEVTFVGVLLACSHGGFVDVGRE-HFHMIEKKYGIRLILEHYACMVD 320
Query: 177 MYSKCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ ++ G L A ++ GMP K D V W A++ G
Sbjct: 321 LLARSGHLQEAHKIIAGMPMKPDAVVWRALLGG 353
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 41/185 (22%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+HA +++ G Q +++ L+ Y+ +A ++FD + RDTV++N +I + +
Sbjct: 31 LHALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSHRDTVSFNSMIHAHAMSGD 90
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
A LF+ + P VT
Sbjct: 91 VVSARRLFERVP------SPTPVTW----------------------------------- 109
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
S++A + G + A +F+ MP +D+VSW+AM+SGLA N +A+ F M G
Sbjct: 110 TSMVAGLCRAGDVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFA 169
Query: 232 PDDQT 236
P+ T
Sbjct: 170 PNRGT 174
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H + + G + N+LI Y+ G + A VF GM +D VS+++MI AM+G
Sbjct: 31 LHALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSHRDTVSFNSMIHAHAMSG- 89
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
D + + +R P T+T +++ G V + M
Sbjct: 90 --DVVSARRLFERVPS-PTPVTWTSMVAGLCRAGDVAAARRLFEEM 132
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 300/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + E LF KM + N + + + C S+ G Q+H+ +++
Sbjct: 82 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++L+D+Y+ E EA ++FD +P+RD V+ +IS Y + +AL LF
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E C + VT ++ A + L +L++G+++H I + L NSLI MYSK
Sbjct: 202 QLYSEGMQC--NHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSK 259
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L + VF M E+ VVSW+AM+ G +G G + I F + + V PD T V
Sbjct: 260 CGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAV 318
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CSH GLVDEG+ D + K+ L + HYGC++DLLGR+G L++A LI +M +
Sbjct: 319 LSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFES 378
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+IW +LLGACR+H +V +GE V + L+E++ + +G+YV+L N+Y++ G W+ V ++R+
Sbjct: 379 TPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRK 438
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK + PG S I L V+H F + HP +I + EI +K AG+V +++
Sbjct: 439 LMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSC 498
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSEKLAI FG++ TPPG TIRV KNLRICVDCHNFAK +S VY
Sbjct: 499 VLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYE 558
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD+ RFH G C+C DYW
Sbjct: 559 REISLRDKNRFHLLTHGNCTCGDYW 583
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 159/316 (50%), Gaps = 15/316 (4%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
AI C++ +L G Q+HAR++ Y+ L T L+ +Y +A + D +P+R
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V+W +IS Y + +R +AL LF + R +GC P++ T VL +C+ ++ G+++
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLR--AGCIPNEYTLATVLTSCSGPQSIYQGKQV 133
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + + S M + +SL+ MY+K ++ A VF +PE+DVVS +A+ISG A G
Sbjct: 134 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 193
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG----MMFLDRMSKDFGILPNIH 271
+A++ F + G+ + TFT +++A S +D G + L + F L N
Sbjct: 194 EEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN-- 251
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
++D+ + G L + ++ +M ++ W +L H LG VI +L
Sbjct: 252 ---SLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRHG---LGHEVISLFKDL 304
Query: 332 KAQESGDYVLLLNLYS 347
+ D V LL + S
Sbjct: 305 HKEVKPDSVTLLAVLS 320
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 299/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + P E ++ +MR+ + + I+ C + G +H R LR G
Sbjct: 183 MVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHG 242
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D + T+L+D+Y+ A ++F +P R+ V+WN LIS + +N +AL LF
Sbjct: 243 MRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFR 302
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ SG +PD + L ACA +G L+ G+ IH +I + L +++ MYSK
Sbjct: 303 EMS--TSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSK 359
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A ++F + +D+V W+AMI+ +G G DA+ F + G+ PD TF +
Sbjct: 360 CGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASL 419
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV+EG + DRM +FGI P H CVVDLL R+GL+++A +++ SM +P
Sbjct: 420 LSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEP 479
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW LL C +K + LGE + + ++E + ++ G L+ NLY++ W+KV+E+R+
Sbjct: 480 TIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRK 539
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G + PG S I + G H FV++D SHP+ EI +M+ +++ +++ GYV
Sbjct: 540 LMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEF 599
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H+L + K LSYHSE+LAIAFG+L T PGT + + KNLR+C DCH+ K +S + +
Sbjct: 600 VYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVD 659
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 660 REIVVRDAKRFHHFKDGACSCGDYW 684
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 16/320 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A S + SP +F + P + + A+ C + L + R G
Sbjct: 83 LLAARSRAGSPGAALRVFRALPSSARP-DSTTFTLALTACARLGDLDAAEAVRVRAFAAG 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + + L+ +YS +A ++FD +P++D VAW+ +++ ++ R +AL ++
Sbjct: 142 YGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYS 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G D+V + V+QAC G G +H HG + + SL+ MY+K
Sbjct: 202 RM--REHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAK 259
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G +A +VF+ MP ++ VSW+A+ISG A NGH +A++ F M +G+ PD
Sbjct: 260 NGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSA 319
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC-----VVDLLGRAGLLDQAYQLITS 295
L AC+ G FL G + + C V+D+ + G L+ A +L
Sbjct: 320 LLACADVG-------FLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNK 372
Query: 296 MGVKPDSTIWRTLLGACRIH 315
+ + D +W ++ C H
Sbjct: 373 LSSR-DLVLWNAMIACCGTH 391
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 169/387 (43%), Gaps = 51/387 (13%)
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
AWN L++ R AL +F L S +PD T L L ACA LG L+ E +
Sbjct: 79 AWNALLAARSRAGSPGAALRVFRAL---PSSARPDSTTFTLALTACARLGDLDAAEAVRV 135
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
GYG + +C++L+ +YS+CG++G A VF GMP KD V+WS M++G G +
Sbjct: 136 RAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVE 195
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVDEGMM--------FLD 258
A+ + M+ GV D+ GV+ AC+ H + GM +D
Sbjct: 196 ALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVD 255
Query: 259 RMSKD---------FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTI 304
+K+ F ++P N + ++ + G D+A L M G++PDS
Sbjct: 256 MYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGA 315
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
+ L AC + LG+ + ++ + +L++YS G E ++L ++
Sbjct: 316 LVSALLACADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSS 375
Query: 365 KGLQT-TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ L + G G H+ + ++Q L+E + A + A + S L
Sbjct: 376 RDLVLWNAMIACCGTHGCGHDALA----------LFQELNETGIKPDHATF-ASLLSALS 424
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLAT 450
+ G E+G + +++ FG+ T
Sbjct: 425 HSGLVEEGK---FWFDRMITEFGIEPT 448
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/473 (38%), Positives = 288/473 (60%), Gaps = 2/473 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ + +M + + F S + ++ +L+ G +IH +R+GY D + ++L
Sbjct: 178 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + ++C++F +PQ D ++WN +I+ ++N + L F + + KP
Sbjct: 238 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM--LIAKIKP 295
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ V+ ++ ACAHL L G+++H YI + + + ++L+ MY+KCG++ A +F
Sbjct: 296 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 355
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M D+VSW+AMI G A++GH DAI F M+ GV P+ F VL+ACSH GLVD
Sbjct: 356 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 415
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
E + + M++D+ I+P + HY V DLLGR G L++AY+ I+ M ++P ++W TLL A
Sbjct: 416 EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK++ L E+V + L + Q G YVLL N+YS+ G W+ ++LR M +KG++ P
Sbjct: 476 CRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 535
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
CS I +K VH FV D SHP + I + L + +Q++ GYV + T LH++ E+K
Sbjct: 536 ACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKR 595
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVI 484
L HSE+LAI FG+++TP GTTIRV KNLR+CVDCH K +S + RE++
Sbjct: 596 YLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV 648
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 14/252 (5%)
Query: 73 DLYSTFEKSFEAC----KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
D+YS EK K+F+ +P+RD V+WN +IS +N DAL + + +
Sbjct: 134 DVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNAD-- 191
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD T VL A L G++IH Y +GY + + + +SLI MY+KC + +
Sbjct: 192 LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSC 251
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF +P+ D +SW+++I+G NG + ++ F M A + P+ +F+ ++ AC+H
Sbjct: 252 RVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 311
Query: 249 LVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+ G ++ R D N+ +VD+ + G + A + M + D W
Sbjct: 312 TLHLGKQLHGYIIRSRFD----GNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSW 366
Query: 306 RTLLGACRIHKH 317
++ +H H
Sbjct: 367 TAMIMGYALHGH 378
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
SG PD VL++C + L FGE +H I G G + CN+L+ MYSK SL
Sbjct: 4 SGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEE 63
Query: 187 A-------FEVFKGMPEKDVVSWSAMISGLAMNGHGRDA-IESFGAM-QRAGVFPDDQTF 237
++ G+PE + + L R A I+ G + Q + + T+
Sbjct: 64 GGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTY 123
Query: 238 TGVLSACSHCGLV---DEGMMFLDRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQL 292
V + ++ +L + K F ++P +I + V+ + G+ + A +
Sbjct: 124 KKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMM 183
Query: 293 ITSMG---VKPDSTIWRTLL 309
+ MG ++PDS ++L
Sbjct: 184 VREMGNADLRPDSFTLSSVL 203
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 285/507 (56%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + LF++M N + C L G IH +V G
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294
Query: 61 YQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
Y+ D + L+++Y+ S E A ++F+ + RD + WN+LI Y++ + +DAL +F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E P+++T VL ACA LGA G+ +H I+ + + L NSL+ MY+
Sbjct: 355 KQMQLE--NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYN 412
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+CGSL VF + +K +VSWS +I+ A +GH R +E F + + G+ DD T
Sbjct: 413 RCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVS 472
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
LSACSH G++ EG+ M D G+ P+ H+ C+VDLL RAG L+ A LI M
Sbjct: 473 TLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL-NLYSSVGDWEKVKEL 358
PD+ W +LL C++H RV + L EL++++ V LL N+Y+ G W+ V++
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKT 592
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R N + + PGCS I + VHEFV D SHP I + ++KQ+K AGYV ++
Sbjct: 593 R---NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDM 649
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LHN+ EEK L YHSEKLAIA+G+++TPPGT + + KNLR CVDCH AK +S +
Sbjct: 650 RMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRI 709
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD RFHHF G CSC DYW
Sbjct: 710 VGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 5/314 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V A++ + E + +M + + + AI C L G +HA +L
Sbjct: 29 IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D L T L+ +Y+ A K FDE+ ++ V WN LI+ Y RN R AL ++
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 120 -DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
D +++ G KPD +T L AC+ +G + G +I GY S + N+LI MY
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCGSL A +VF + +DV++W+ MISG A G A+E F M P+ TF
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-AGLLDQAYQLITSMG 297
G+L+AC++ +++G + R K+ G ++ ++++ + + L++A Q+ +
Sbjct: 269 GLLTACTNLEDLEQGRA-IHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLR 327
Query: 298 VKPDSTIWRTLLGA 311
+ D W L+ A
Sbjct: 328 TR-DVITWNILIVA 340
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 44/305 (14%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +F I ++V+W ++++ + RN R+AL + + E G +PD ++ +
Sbjct: 10 DALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLE--GLRPDGAMFVVAIGV 67
Query: 143 CAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
C+ L+ G+ +H I E + L +LI MY++C L +A + F M +K +V+
Sbjct: 68 CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127
Query: 202 WSAMISGLAMNGHGRDAIESFGAM---QRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-- 256
W+A+I+G + NG R A++ + M G+ PD TF+ L ACS G + +G
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEA 187
Query: 257 --------------------------LDRMSKDFGILPN--IHHYGCVVDLLGRAGLLDQ 288
L+ K F L N + + ++ + G Q
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247
Query: 289 AYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---L 342
A +L MG KP+ + LL AC + + G R I ++ ES D V+ L
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG-RAIHRKVKEHGYES-DLVIGNVL 305
Query: 343 LNLYS 347
LN+Y+
Sbjct: 306 LNMYT 310
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 48/225 (21%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGS+ A VF + + VSW+ +++ A NGH R+A+ + M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 237 FTGVLSACSHCGLVDEGM----MFLDRMSKDFGILPN---IHHYGCVVDL---------L 280
F + CS + +G M L+ +F I+ I Y DL +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 281 GRAGLLD------------------QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVT 319
G+ L+ + YQ + S G+KPD+ + + L AC + ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 320 LGERVIEHLIELKAQESG---DYVL---LLNLYSSVGDWEKVKEL 358
G IE + SG D ++ L+N+YS G E +++
Sbjct: 181 QGRE-----IEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 275/439 (62%), Gaps = 2/439 (0%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
++T ++ YS + +A +FD++ ++D V W+ +IS Y + + ++AL LF + +
Sbjct: 16 VLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEM--QV 73
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G KPD VT L V+ ACA LG L+ + IH Y+ ++G G + + N+LI MY+KCG+LG
Sbjct: 74 FGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGA 133
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF+ M ++V+SW++MI+ A++G +A++ F M+ + P+ TF GVL ACSH
Sbjct: 134 ARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSH 193
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
GLV+EG M+ + I P HYGC+VDL GRA LL A +L+ +M + P+ IW
Sbjct: 194 AGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWG 253
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
+L+ AC+IH LGE + ++EL+ G V L N+Y+ W+ V ELR M ++G
Sbjct: 254 SLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRG 313
Query: 367 LQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLG 426
+ GCS I L V+EFV+ D H + ++IY+ LDE+ K+LK+ GY S L ++
Sbjct: 314 ISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDVE 373
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
E K + +HSEKLA+ +G++ G+ IR+ KNLR+C DCH F K++S VY E+I+R
Sbjct: 374 EEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIVR 433
Query: 487 DRLRFHHFREGRCSCNDYW 505
DR RFHH++ G CSCNDYW
Sbjct: 434 DRTRFHHYKAGVCSCNDYW 452
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 130/299 (43%), Gaps = 18/299 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S P+E LF +M+ I + I C + L IH V ++G
Sbjct: 51 MISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNG 110
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+D+Y+ A +F+++ R+ ++W +I+ + + +AL F
Sbjct: 111 LGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFY 170
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ E KP+ VT + VL AC+H G +E G + ++ EH K ++ ++
Sbjct: 171 QMKDE--NIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFG 228
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ L A E+ + MP +VV W ++++ + HG + + F A Q + PD
Sbjct: 229 RANLLRDALELVETMPLAPNVVIWGSLMAACQI--HGENELGEFAAKQVLELEPDHD--- 283
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG--RAGLLDQAYQLITS 295
G L S+ + DR +D G L N+ + G R L +Q Y+ + +
Sbjct: 284 GALVQLSN-------IYAKDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMA 335
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 299/540 (55%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ S E +F M + + S + L+ G+ IH V++ G
Sbjct: 221 MIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQG 280
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT------------------------ 96
D + + L+D+Y + E ++FD++ D
Sbjct: 281 LVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFR 340
Query: 97 -----------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
V+W +I+C +N R +AL LF + + +G KP+ VT +L AC +
Sbjct: 341 QLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM--QIAGVKPNSVTIPCLLPACGN 398
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ AL G+ H + G + + + ++LI MY+KCG + + F G+P K++V W+A+
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+G AM+G ++A+E F MQR+G PD +FT VLSACS GL +EG + + MS +G
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I + HY C+V LL RAG L+QAY +I M V PD+ +W LL +CR+H +V+LGE
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L EL+ G+Y+LL N+Y+S G W +V +R+ M KGL+ PGCS I +K VH
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHML 638
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+ D SHP++ +I + LD+++ ++K GY EI L ++ ++K L HSEKLA+ F
Sbjct: 639 LAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVF 698
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L TPPG ++V KNLRIC DCH K +S RE+ +RD RFHHF+EG CSC DYW
Sbjct: 699 GLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL Q HA +L+ G D+ L T L+ Y+ +A + D +P+ + +++ LI
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ + + AL F + G PD+ ++ACA L AL+ ++H S G+
Sbjct: 88 AFSKFHQFHHALSTFSQMLTR--GLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
S + +SL+ MY KC + A VF M E DVVSWSA+++ A G +A F
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEG-MMFLDRMSKDF 264
M +GV P+ ++ G+++ +H GL E +MFLD + F
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGF 246
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A+S F +M + + + A+K C +L Q+H G
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSG 144
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ DS + ++L+ +Y + +A ++FD + + D V+W+ L++ Y R +A LF
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFS 204
Query: 121 N---------------------------------LNREESGCKPDDVTCLLVLQACAHLG 147
L+ G +PD T VL A L
Sbjct: 205 EMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLE 264
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
L G IH Y+ + G S + ++LI MY KC +VF M DV S +A I
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GL+ NG ++ F ++ G+ + ++T +++ CS G E + M + G+
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM-QIAGVK 383
Query: 268 PNIHHYGCVVDLLGRAGLL 286
PN C++ G L
Sbjct: 384 PNSVTIPCLLPACGNIAAL 402
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ + + +F +M+ + + + + + C +L G Q+HA ++R
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + + L+D+Y + A +F ++ ++ V+W ++ Y +N + +A+ F
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ ++ G +PDD T V+ +CA+L +LE G + H G S + + N+L+ +Y K
Sbjct: 366 DM--QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGK 423
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ + +F + KD V+W+A++SG A G + I F +M G+ PD TF GV
Sbjct: 424 CGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGV 483
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS GLV++G + M + GI+P HY C++DL RAG +++A I M P
Sbjct: 484 LSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSP 543
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL +CR + ++ +G+ E L+EL + YVLL ++Y++ G WE+V LR+
Sbjct: 544 DAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRK 603
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL+ PGCS I K VH F DD S+P ++IY L+++N ++ GYV ++ S
Sbjct: 604 DMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNS 663
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++G EK L++HSEKLAIAFG+L PPG IRV KNLR+C DCHN K +S + N
Sbjct: 664 VLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITN 723
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++G CSC D+W
Sbjct: 724 REILVRDTARFHLFKDGTCSCGDFW 748
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 31/259 (11%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
I T P+ +F + + + +G + +V + T++ YS + E
Sbjct: 36 IKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEME 95
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
LFD +P+RD V+WN LIS Y ++ ++ + + + + +T +L +
Sbjct: 96 YLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASK 155
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV----- 200
G ++ G +IH ++ + G+ S + + + L+ MYSK G + A +VF +PEK+VV
Sbjct: 156 RGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTL 215
Query: 201 --------------------------SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
SW++MI+G NG RDAI+ F M+ + D
Sbjct: 216 IMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQ 275
Query: 235 QTFTGVLSACSHCGLVDEG 253
TF VL+AC + EG
Sbjct: 276 YTFGSVLTACGGVMALQEG 294
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 297/494 (60%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
++ LF++M + F ++ C SL+ G ++HA +L+ G++L S + ++L
Sbjct: 176 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 235
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y + KL +P R VAWN LI+ +N + L ++ + + +G +P
Sbjct: 236 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMM--KMAGFRP 293
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +T + VL AC+ L L G++IH + + G S + + +SLI+MYS+ G L + + F
Sbjct: 294 DKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF 353
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
DVV WS+MI+ +G G +A+E F M+ + ++ TF +L ACSH GL +
Sbjct: 354 VDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKE 413
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G + D M K + + P I HY CVVDLLGRAG L++A +I SM V+PD IW+TLL A
Sbjct: 414 KGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C++HK + ER+ E +I+L ++ YVLL N+++S +W V ++R+ M ++ ++ P
Sbjct: 474 CKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEP 533
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + LK +VH+F + D SHP+ EI L E+ +LK GYV E+ S LH++ EEK
Sbjct: 534 GISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKE 593
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L++HSEK AIAF ++ T IRV KNLR+C DCHN K +S + NRE+I+RD RF
Sbjct: 594 YNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRF 653
Query: 492 HHFREGRCSCNDYW 505
HHF++G CSC +YW
Sbjct: 654 HHFKDGECSCGNYW 667
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 168/375 (44%), Gaps = 42/375 (11%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST---FEKSF 82
I ++P S ++ C+K SL GG Q+H+ ++ G D + L++ YS F+ S
Sbjct: 58 IWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSL 117
Query: 83 ----------------------------EACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
A KLFDE+ +R+ WN +I+ + + +
Sbjct: 118 VLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQ 177
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL LF + G PD+ T VL+ CA L +L G+++H + + G+ + +SL
Sbjct: 178 ALSLFKEMY--GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 235
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
MY K GSL ++ K MP + VV+W+ +I+G A NG + + + M+ AG PD
Sbjct: 236 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 295
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF VLSACS + +G + K G + ++ + R+G L+ + +
Sbjct: 296 ITFVSVLSACSELATLGQGQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLEDSIKAFV 354
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIE--HLIELKAQESGDYVLLLNLY--SSVG 350
D +W +++ A H GE +E H +E E+ + L LY S G
Sbjct: 355 DRE-NFDVVLWSSMIAAYGFHGR---GEEALELFHQMEDLKMEANEVTFLSLLYACSHSG 410
Query: 351 DWEKVKELREFMNEK 365
EK E + M +K
Sbjct: 411 LKEKGTEYFDLMVKK 425
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 300/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + E LF KM + N + + + C S+ G Q+H+ +++
Sbjct: 114 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 173
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++L+D+Y+ E EA ++FD +P+RD V+ +IS Y + +AL LF
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 233
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E C + VT ++ A + L +L++G+++H I + L NSLI MYSK
Sbjct: 234 QLYSEGMQC--NHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSK 291
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L + VF M E+ VVSW+AM+ G +G G + I F + + V PD T V
Sbjct: 292 CGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAV 350
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CSH GLVDEG+ D + K+ L + HYGC++DLLGR+G L++A LI +M +
Sbjct: 351 LSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFES 410
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+IW +LLGACR+H +V +GE V + L+E++ + +G+YV+L N+Y++ G W+ V ++R+
Sbjct: 411 TPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRK 470
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK + PG S I L V+H F + HP +I + EI +K AG+V +++
Sbjct: 471 LMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSC 530
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSEKLAI FG++ TPPG TIRV KNLRICVDCHNFAK +S VY
Sbjct: 531 VLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYE 590
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD+ RFH G C+C DYW
Sbjct: 591 REISLRDKNRFHLLTHGNCTCGDYW 615
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 159/316 (50%), Gaps = 15/316 (4%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
AI C++ +L G Q+HAR++ Y+ L T L+ +Y +A + D +P+R
Sbjct: 48 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V+W +IS Y + +R +AL LF + R +GC P++ T VL +C+ ++ G+++
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLR--AGCIPNEYTLATVLTSCSGPQSIYQGKQV 165
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + + S M + +SL+ MY+K ++ A VF +PE+DVVS +A+ISG A G
Sbjct: 166 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 225
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG----MMFLDRMSKDFGILPNIH 271
+A++ F + G+ + TFT +++A S +D G + L + F L N
Sbjct: 226 EEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN-- 283
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
++D+ + G L + ++ +M ++ W +L H LG VI +L
Sbjct: 284 ---SLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRHG---LGHEVISLFKDL 336
Query: 332 KAQESGDYVLLLNLYS 347
+ D V LL + S
Sbjct: 337 HKEVKPDSVTLLAVLS 352
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/461 (42%), Positives = 274/461 (59%), Gaps = 9/461 (1%)
Query: 48 GGLQIHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLIS 104
G +HA + R G + D + +++ Y+ A ++FD P QRD WN L+
Sbjct: 117 AGTAVHASLFRRGLESRDRFISASMLSFYAAAGDLPAAREVFDRSPPNQRDLALWNSLLH 176
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y+ L LF + D+VT L V+ AC+HLGAL+ G H Y +
Sbjct: 177 AYLSQGLYTHVLRLFRQM------VATDEVTLLAVVSACSHLGALDTGRWAHAYHARTCR 230
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ NL +L+ MY +CG + A+ VF M +KDV +WS MI+GLA+NG RDA++ F
Sbjct: 231 NTTRNLGTALLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALKLFAE 290
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M+ GV PD T T VLSACSH G+VDEG MFL M ++ + P I HYGCVVDLLGRAG
Sbjct: 291 MKNIGVDPDSITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLLGRAG 350
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
L++A LI ++ K D +W LL ACR HK+V +G+ +++L +G V L N
Sbjct: 351 QLEEALALIETVPFKADVALWGALLVACRAHKNVDMGQMAAMEILKLDPHHAGACVFLSN 410
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
Y++ G W+ V+E+R M E + PG S + L GVV+EF+ D SHP+ + IY MLDE
Sbjct: 411 AYAAAGKWDLVQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDRIYAMLDE 470
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ K L + G+ ++ E+K +S HSEKLA+A G+++T G IR+ KNLRI
Sbjct: 471 VCKTLSLKGHRPSTKEVAFDIDEEDKEVCISQHSEKLALALGLISTRRGAVIRIVKNLRI 530
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH+ K++S VY+R +++RDR RFHHF+ G CSC DYW
Sbjct: 531 CEDCHSVMKIVSEVYDRVIVVRDRNRFHHFKNGSCSCLDYW 571
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +M + T+ + C +L G HA R L T L+++Y
Sbjct: 190 LFRQM----VATDEVTLLAVVSACSHLGALDTGRWAHAYHARTCRNTTRNLGTALLNMYM 245
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A +F E+ +D W+V+I+ N RDAL LF + + G PD +T
Sbjct: 246 RCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALKLFAEM--KNIGVDPDSITM 303
Query: 137 LLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
VL AC+H G ++ G+ +H E+ + ++ + + G L A + + +P
Sbjct: 304 TAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLLGRAGQLEEALALIETVP 363
Query: 196 EK-DVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
K DV W A++ +A H + AM+
Sbjct: 364 FKADVALWGALL--VACRAHKNVDMGQMAAME 393
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/450 (43%), Positives = 272/450 (60%), Gaps = 2/450 (0%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G + + ++ + Y LD +++ Y A +FD +P++D V+W+ +IS Y
Sbjct: 425 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 484
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+N + L LF + + SG KPD+ T + V+ ACA L ALE G+ +H YI +G
Sbjct: 485 QNDLFDETLALFQEM--QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN 542
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ L +LI MY KCG + A EVF GM EK + +W+A+I GLAMNG +++ F M++
Sbjct: 543 VILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK 602
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
V P++ TF GVL AC H GLVDEG M D I PN+ HYGC+VDLLGRAG L
Sbjct: 603 CHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQ 662
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+A +L+ M + PD W LLGAC+ H +G RV LIEL+ G +VLL N+Y+
Sbjct: 663 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYA 722
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
S G W+ V E+R M + + PGCS I GV+HEF+ D +HP ++ I ML E+
Sbjct: 723 SKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAM 782
Query: 408 QLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
+LK+ GY +I L ++ EEK + L HSEKLAIAFG++ P T IR+ KNLRIC D
Sbjct: 783 KLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICND 842
Query: 468 CHNFAKVLSGVYNREVIIRDRLRFHHFREG 497
CH AK++S + R++++RDR RFHHF +G
Sbjct: 843 CHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 35/258 (13%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EACKLFDE+ ++D V W+ LI+C+ +N+ +A+ F +++ G D+V + L A
Sbjct: 328 EACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK--IGVMVDEVVAVSALSA 385
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE------------- 189
CA+L + G+ IH + G S +NL N+LI MYSKCG + +A +
Sbjct: 386 CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISW 445
Query: 190 ------------------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+F MPEKDVVSWS+MISG A N + + F MQ +G
Sbjct: 446 NSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK 505
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ T V+SAC+ +++G ++ K G+ N+ ++D+ + G ++ A +
Sbjct: 506 PDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 564
Query: 292 LITSMGVKPDSTIWRTLL 309
+ M K ST W L+
Sbjct: 565 VFYGMIEKGIST-WNALI 581
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 47/296 (15%)
Query: 3 RAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQ 62
RAY ++SP F L++ M + + + I+ C S Q+H VL+ G+
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 63 LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
D + TL++ +S +AC++F+E D+V+WN +++ YI
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE-------------- 291
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
+G +E + I+ + E + NS+I ++ G
Sbjct: 292 -----------------------IGNVEEAKHIYHQMPERSIIAS----NSMIVLFGMRG 324
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
+ A ++F M EKD+V+WSA+I+ N +AI +F M + GV D+ LS
Sbjct: 325 LVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALS 384
Query: 243 ACSHCGLVDEGMMF----LDRMSKDFGILPN--IHHYGCVVDLLGRAGLLDQAYQL 292
AC++ +V+ G + L ++ + L N I+ Y D++ L D+AY L
Sbjct: 385 ACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL 440
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
YI+ A L+ ++ G D+ T L++QAC+ + +++H ++ + G+
Sbjct: 188 YIQTNSPHFAFTLYKSMLSNYLGA--DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + + N+LI +S C ++ A VF D VSW+++++G G+ +A + M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+ + VL GLV E D M + ++ + ++ + +
Sbjct: 306 PERSIIASNSMI--VLFGMR--GLVVEACKLFDEMLEK-----DMVTWSALIACFQQNEM 356
Query: 286 LDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
++A + M GV D + + L AC V +G+ + H + LK + Y+ L
Sbjct: 357 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLI--HSLSLKIG-TESYINL 413
Query: 343 LN----LYSSVGD 351
N +YS GD
Sbjct: 414 QNALIYMYSKCGD 426
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 291/522 (55%), Gaps = 17/522 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + EE LF +M + + S + C + G +H V++
Sbjct: 357 MICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKR 416
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + LMD+Y+ + A ++F I RD V+WN LI+ + +A L
Sbjct: 417 GMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLV 476
Query: 120 DNLN--------------REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ E C P+++T + +L CA L A G++IH Y H
Sbjct: 477 TEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALE 536
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
S + + ++L+ MY+KCG L + VF +P ++V++W+ +I M+G G +A+ F M
Sbjct: 537 SDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEM 596
Query: 226 QRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
G P++ TF L+ACSH GLVD G+ M +D G+ P + CVVD+LGRAG
Sbjct: 597 AAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAG 656
Query: 285 LLDQAYQLITSMGV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
LD+AY +ITSM + + W +LLGACR+H++V LGE E L EL+ E+ YVLL
Sbjct: 657 RLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLC 716
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+YS+ G W+K +R M +G+ PGCS I L G +H F+ + SHP E++ +D
Sbjct: 717 NIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMD 776
Query: 404 EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLR 463
+ ++++ GY + + LH++ +EK L YHSEKLAIAFG+L PPG IRVAKNLR
Sbjct: 777 ALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLR 836
Query: 464 ICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+C DCH AK +S + R++++RD RFHHFR+G CSC DYW
Sbjct: 837 VCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 25/288 (8%)
Query: 49 GLQIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQR------DTVAW 99
G + HA L+ G+ + + L+ +Y+ +A LF D V W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250
Query: 100 NVLISCYIRNQRTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
N +IS ++ R +A+ L+D ++ G +PD VT L AC+ L L G ++H
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSL---GVRPDGVTFASALPACSRLEMLALGREMHAV 307
Query: 159 I-SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHG 215
+ + + + ++L+ MY+ + A VF +PE + + W+AMI G A G
Sbjct: 308 VLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMD 367
Query: 216 RDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK---DFGILPNIH 271
+A+E F M+ AG P + T +GVL AC+ EG + M G+ N
Sbjct: 368 EEALELFSRMEAEAGCAPSETTMSGVLPACAR----SEGFAGKEAMHGYVVKRGMAGNRF 423
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
++D+ R G +D A ++ + + D W TL+ C + H
Sbjct: 424 VQNALMDMYARLGEMDVARRIFAMIDPR-DVVSWNTLITGCVVQGHAA 470
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP---------DDVTCLLVLQACA 144
RD V++N LIS ALCLF R + T + VL AC+
Sbjct: 131 RDAVSYNSLIS----------ALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACS 180
Query: 145 HL---GALEFGEKIHRYISEHGY---GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK- 197
HL G + H + + G+ G + N+L++MY++ G + A +F+
Sbjct: 181 HLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAF 240
Query: 198 -----DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
DVV+W+ MIS L G +A+E M GV PD TF L ACS ++
Sbjct: 241 SPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLAL 300
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDL 279
G + KD + N +VD+
Sbjct: 301 GREMHAVVLKDADLAANSFVASALVDM 327
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/535 (39%), Positives = 310/535 (57%), Gaps = 38/535 (7%)
Query: 9 SSPEE--GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
SSP+ ++ +MR R+ + F + L G + HA++L G D
Sbjct: 39 SSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPF 98
Query: 67 LMTTLMDLYST----------FEKSF---------------------EACKLFDEIPQRD 95
+ T+L+++YS+ F+ S +A KLFDE+P+R+
Sbjct: 99 VRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERN 158
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLN---REESGCKPDDVTCLLVLQACAHLGALEFG 152
++W+ LI+ Y+ + ++AL LF + E+ +P++ T VL AC LGALE G
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAM 211
+ +H YI ++ + L +LI MY+KCGSL A VF + +KDV ++SAMI LAM
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 212 NGHGRDAIESFGAMQRA-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
G + + F M + + P+ TF G+L AC H GL++EG + M ++FGI P+I
Sbjct: 279 YGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSI 338
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HYGC+VDL GR+GL+ +A I SM ++PD IW +LL R+ + E ++ LIE
Sbjct: 339 QHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIE 398
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
L SG YVLL N+Y+ G W +VK +R M KG+ PGCS + ++GVVHEFVV D
Sbjct: 399 LDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDE 458
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLAT 450
S IY MLDEI ++L+ AGYV + L +L ++K ALSYHSEKLAIAF ++ T
Sbjct: 459 SQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKT 518
Query: 451 PPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
PGT +R+ KNLRIC DCH K++S +++RE+++RD RFHHFR+G CSC D+W
Sbjct: 519 RPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 119/311 (38%), Gaps = 78/311 (25%)
Query: 95 DTVAWNVLISCYIRN----QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
++ WN++I + N QR N S PD T +L + + L
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVS---PDFHTFPFLLPSFHNPLHLP 79
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG----------------- 193
G++ H I G + SL+ MYS CG L A VF
Sbjct: 80 LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 194 --------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-----RAGVFPDD 234
MPE++V+SWS +I+G M G ++A++ F MQ A V P++
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 235 QTFTGVLSACSHCGLVDEGMMF----------------------------LDRMSKDFGI 266
T + VLSAC G +++G L+R + F
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 267 L---PNIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVT 319
L ++ Y ++ L GL D+ +QL + M + P+S + +LGAC +
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 320 LGERVIEHLIE 330
G+ + +IE
Sbjct: 320 EGKSYFKMMIE 330
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-----IPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
++ Y M +E LF +M+ + + N F S + C + +L G +HA
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI-PQRDTVAWNVLISCYIRNQRTRD 114
+ + ++D L T L+D+Y+ A ++F+ + ++D A++ +I C T +
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR-YISEHGYGSKMNLCNS 173
LF + ++ P+ VT + +L AC H G + G+ + I E G +
Sbjct: 285 CFQLFSEMTTSDN-INPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGC 343
Query: 174 LIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
++ +Y + G + A MP E DV+ W +++SG M G D GA++R
Sbjct: 344 MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG---DIKTCEGALKR 395
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/516 (37%), Positives = 291/516 (56%), Gaps = 23/516 (4%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
EE LF +M + P + A + C + G +H V++ + +
Sbjct: 347 EEAIELFSRM-EAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQN 405
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF---------- 119
LMD+Y+ + EA +F I RD V+WN LI+ I +A L
Sbjct: 406 ALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAA 465
Query: 120 --------DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
D+ + + C P+++T + +L CA L A G++IH Y H S + +
Sbjct: 466 SGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVG 525
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-V 230
++L+ MY+KCG L +A VF +P ++V++W+ +I M+G G +A+ F M G
Sbjct: 526 SALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEA 585
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P++ TF L+ACSH GLVD G+ M +D+G P + + CVVD+LGRAG LD+AY
Sbjct: 586 TPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAY 645
Query: 291 QLITSMGV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
+I+SM + + W T+LGACR+H++V LG E L EL+ E+ YVLL N+YS+
Sbjct: 646 GIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAA 705
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G WE E+R M ++G+ PGCS I L G +H F+ + +HP +++ +D + +++
Sbjct: 706 GLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERM 765
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+ GYV + + LH++ EK L YHSEKLAIAFG+L PPG TIRVAKNLR+C DCH
Sbjct: 766 RREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCH 825
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
AK +S + RE+++RD RFHHFR+G CSC DYW
Sbjct: 826 EAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 31/258 (12%)
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLF-------DNLNREESGCKPDDVTCLLVLQACAHL 146
RD V++N LIS ALCLF D L + + T + VL AC+HL
Sbjct: 116 RDAVSYNSLIS----------ALCLFRRWGHALDALRDMLADHEVSSFTLVSVLLACSHL 165
Query: 147 G--ALEFGEKIHRYISEHGY---GSKMNLCNSLIAMYSKCGSLGMAFEVF--KGMPEKDV 199
G + H + +HG+ G + N+L++MY++ G + A +F G D+
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
V+W+ MIS L G +A++ M GV PD TF L ACS L+ G
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHK 316
+ KD + N +VD+ + A + ++ G + +W ++ C +
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQ--LGMWNAMI--CGYAQ 341
Query: 317 HVTLGERVIEHLIELKAQ 334
H + E IE ++A+
Sbjct: 342 HGGMDEEAIELFSRMEAE 359
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 294/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S+ E+ F LF ++ + + N ++ S ++ C L G QIH ++ G
Sbjct: 335 MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIG 394
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + LMD Y+ + K+F + + V+WN ++ + ++ +AL +F
Sbjct: 395 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFC 454
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + C VT VL+ACA ++ +IH I + + + + NSLI Y+K
Sbjct: 455 EMQAAQMPCT--QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 512
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +VF+ + E+D++SW+A+ISG A++G DA+E F M ++ V +D TF +
Sbjct: 513 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 572
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CS GLV+ G+ D M D GI P++ HY C+V LLGRAG L+ A Q I + P
Sbjct: 573 LSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 632
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR LL +C IHK+V LG E ++E++ Q+ YVLL N+Y++ G ++V LR+
Sbjct: 633 SAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRK 692
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ PG S + +KG +H F V V HP + I ML+ +N + GY+ +I
Sbjct: 693 SMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINV 752
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSE+LA+A+G++ TPPG IR+ KNLR C+DCH V+S +
Sbjct: 753 VLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVK 812
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +G+CSC DYW
Sbjct: 813 REIIVRDINRFHHFEDGKCSCGDYW 837
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 168/353 (47%), Gaps = 9/353 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV YS + PE F +F KMR NPFA + +K + S++ G IH ++
Sbjct: 234 MVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTL 293
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D+Y+ +A F+ IP D + + +IS Y ++ + A LF
Sbjct: 294 NDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 353
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L R S P++ + VLQAC ++ L+FG++IH + + G+ S + + N+L+ Y+K
Sbjct: 354 RLMR--SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAK 411
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + + ++F + + + VSW+ ++ G + +G G +A+ F MQ A + T++ V
Sbjct: 412 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 471
Query: 241 LSAC-SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
L AC S + G + F I + ++D + G + A ++ + ++
Sbjct: 472 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-ME 528
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD--YVLLLNLYSSVG 350
D W ++ +H + + + + ES D +V LL++ SS G
Sbjct: 529 RDIISWNAIISGYALHGQAADALELFDRMNKSNV-ESNDITFVALLSVCSSTG 580
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 157/337 (46%), Gaps = 11/337 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIK--CCMKFCSLMGGLQIHARVLR 58
+V+A++ E LF ++R + N F + +K M L GG +H+ +
Sbjct: 133 LVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWK 190
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ ++ + + L+D YS +A +F+ I ++D V W ++SCY N +A +
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRV 250
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + SGCKP+ VL+A L ++ G+ IH + ++ ++ +L+ MY
Sbjct: 251 FSKM--RVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMY 308
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A F+ +P DV+ S MIS A + A E F + R+ V P++ + +
Sbjct: 309 AKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLS 368
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL AC++ +D G + K G ++ ++D + +D + ++ +S+
Sbjct: 369 SVLQACTNMVQLDFGKQIHNHAIK-IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR- 426
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+ W T++ LGE + E++A +
Sbjct: 427 DANEVSWNTIVVG---FSQSGLGEEALSVFCEMQAAQ 460
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 26 IPTNP----FACSFAIKCCMKFCSLMGGLQIHARVLRDGY--QLDSQLMTTLMDLYSTFE 79
+P+ P FAC+ ++ C+ GG +H V+R G +LD L+++Y
Sbjct: 51 LPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLG 110
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A +LFD +P+R+ V++ L+ + + A LF L E +T +L
Sbjct: 111 PLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLK 170
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L L G +H + G+ + + LI YS C + A VF G+ KD
Sbjct: 171 LAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDA 228
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
V W+AM+S + N +A F M+ +G P+ T VL A
Sbjct: 229 VVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 292/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++RAY+ E L+ M + + F +K C L G ++H RV+R
Sbjct: 141 LIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRT 200
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + T L+D+Y+ EA +F++ RD WN +I+ +N R +AL L
Sbjct: 201 NWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLC 260
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
N+ E G P T + + A A AL G ++H Y G+GS+ L SL+ MY+
Sbjct: 261 RNMAAE--GIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYA 318
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFT 238
K G + +A +F+ + ++++SW+AMI G M+GH A E F M+ A V PD TF
Sbjct: 319 KSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFV 378
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVLSAC+H G+V E D M + I P + HY C+VD+LG +G +A +I M V
Sbjct: 379 GVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLV 438
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KPDS IW LL C+IHK+V L E ++ LIEL+ +++G+YVLL N+Y+ G WE+ +
Sbjct: 439 KPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARV 498
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M +GL+ CS I LKG H F+V D SHPR ++IY+ L+ + + GYV +
Sbjct: 499 RKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDT 558
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
T HN+ +EK N + HSE+LAIAFG+++TPP T + V KNLR+C DCH K++S +
Sbjct: 559 TPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQI 618
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD R+HHF G CSC D+W
Sbjct: 619 EQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 2/212 (0%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P N + ++ C+ ++ G Q+HAR+L G LD+ L T L+DLY++ A +
Sbjct: 65 PYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARR 124
Query: 87 LFDEIPQRDTV-AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+FDE+P + V WNVLI Y R+ A+ L+ + S KPD+ T VL+ACA
Sbjct: 125 VFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGS-MKPDNFTYPPVLKACAA 183
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L L G ++H + + + + +C LI MY+KCG + A+ VF +D W++M
Sbjct: 184 LLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSM 243
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
I+ NG +A+ M G+ P T
Sbjct: 244 IAACGQNGRPAEALTLCRNMAAEGIAPTIATL 275
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 293/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ S + E LF +MR++ N + +K ++ Q+HA + G
Sbjct: 375 LISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLG 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ DS ++ L+D Y + A ++F++ D +A+ +I+ + DA+ LF
Sbjct: 435 FLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFM 494
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G PD +L ACA L A E G+++H ++ + + S + N+L+ Y+K
Sbjct: 495 EMLRK--GLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAK 552
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A F G+PEK VVSWSAMI GLA +GHG+ A++ F M + P+ T T V
Sbjct: 553 CGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSV 612
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H GLVDE + + M + FGI HY C++DLLGRAG LD A +L+ SM +
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQT 672
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W LL A R+H+ LG E L L+ ++SG +VLL N Y+S G W+ V ++R+
Sbjct: 673 NAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRK 732
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ P S + LK VH F+V D SHPR +IY LDE+ + AGYV +
Sbjct: 733 LMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEV 792
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH++ EK LS+HSE+LA+AF +++TP G IRV KNLRIC DCH K +S + +
Sbjct: 793 DLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVS 852
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD RFHHFR+G CSC DYW
Sbjct: 853 REIIIRDINRFHHFRDGACSCRDYW 877
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 155/313 (49%), Gaps = 8/313 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AYS ++ P + F MR + N F +KC G Q+HA + G
Sbjct: 74 LVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
D + L+ +Y F EA +FDE +R+TV+WN L+S Y++N R A+ +F
Sbjct: 131 LGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVF 190
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ G +P++ V+ AC LE G K+H + GY + N+L+ MYS
Sbjct: 191 GEM--VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYS 248
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + MA VF +PE DVVSW+A ISG ++GH + A+E M+ +G+ P+ T +
Sbjct: 249 KLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L AC+ G + G M K N +G +VD+ + GLLD A ++ + +
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKKVFDWIPQR 367
Query: 300 PDSTIWRTLLGAC 312
D +W L+ C
Sbjct: 368 -DLVLWNALISGC 379
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 176/374 (47%), Gaps = 17/374 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + +F +M + N F S + C L G ++HA V+R G
Sbjct: 173 LMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTG 232
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D L+D+YS A +F ++P+ D V+WN IS + + + AL L
Sbjct: 233 YDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELL- 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + SG P+ T +L+ACA GA G +IH ++ + S + L+ MY+K
Sbjct: 292 -LQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAK 350
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A +VF +P++D+V W+A+ISG + +A+ F M++ G + T V
Sbjct: 351 HGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAV 410
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L + + + + + +++ G L + H ++D + L+ AY++ G
Sbjct: 411 LKSTASLEAISDTRQ-VHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG-SY 468
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIEL--KAQESGDYVL--LLNLYSSVGDWEKVK 356
D + +++ A H GE I+ +E+ K + +VL LLN +S+ +E+ K
Sbjct: 469 DIIAFTSMITALSQCDH---GEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGK 525
Query: 357 EL------REFMNE 364
++ R+FM++
Sbjct: 526 QVHAHLIKRQFMSD 539
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL+ G IHA +L+ G L + L+ YS A ++FDEIP V+W+ L++
Sbjct: 19 SLLQGAHIHAHLLKSG--LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y N RDAL F ++ C ++ +VL+ G FG ++H G
Sbjct: 77 AYSNNAMPRDALGAFRSMRSCSVRC--NEFVLPVVLKCAPDAG---FGTQLHALAMATGL 131
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
G + + N+L+AMY G + A VF + E++ VSW+ ++S N A++ FG
Sbjct: 132 GGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFG 191
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M GV P++ F+ V++AC+ ++ G + M G ++ +VD+ +
Sbjct: 192 EMVWGGVQPNEFGFSCVVNACTGSRDLEAGRK-VHAMVIRTGYDKDVFTANALVDMYSKL 250
Query: 284 GLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
G + A + G P++ + W + C +H H + +E L+++K+
Sbjct: 251 GDIRMAAVVF---GKVPETDVVSWNAFISGCVLHGH---DQHALELLLQMKSS 297
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 268/423 (63%), Gaps = 2/423 (0%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A KLFD +P+R+ ++WN +IS Y++ R DAL +FD + G + + + A
Sbjct: 179 DARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMR--ALGIEGNGFVAASAVVA 236
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C G L G ++HR++ + G L +++ MY KCGS+ A+ VFK +P K + SW
Sbjct: 237 CTGAGVLARGREVHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSW 296
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI GLA++G +DAIE F M+R V PDD T VL+AC+H G+V +G + + + +
Sbjct: 297 NCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQ 356
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+GI P + HYGC+VDL GRAGLLD+A ++I M ++PD + L GAC+IH+ + LGE
Sbjct: 357 RYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGE 416
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+ +IEL Q SG YVLL NL +S G W V ++R M+E+ + G S I + G V
Sbjct: 417 AIGWRVIELDPQNSGRYVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEV 476
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLA 442
EF + H + EI+ + ++ +++++ GY+ + + LH++ EEK L YHSEKLA
Sbjct: 477 CEFQCGSLCHAQEKEIFAAVKDMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLA 536
Query: 443 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCN 502
IAFG+L T PG T+R+ KNLR+C DCH K +S V+ RE+++RDR RFHHF++G CSC
Sbjct: 537 IAFGLLRTRPGDTVRITKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCR 596
Query: 503 DYW 505
DYW
Sbjct: 597 DYW 599
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F++MR I N F + A+ C L G ++H V + G
Sbjct: 198 MISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSG 257
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+D +L T ++D+Y EA +F +P + +WN +I + R +DA+ LF
Sbjct: 258 ITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFH 317
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ RE+ PDDVT + VL ACAH G + G YI + +G KM ++ ++
Sbjct: 318 EMERED--VAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFG 375
Query: 180 KCGSLGMAFEVFKGMP-EKDV 199
+ G L A +V MP E D+
Sbjct: 376 RAGLLDEAKKVIDDMPMEPDI 396
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+++ + G + A ++F GMPE++++SW+AMISG G DA+E F M+ G+
Sbjct: 165 TTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIE 224
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
+ + AC+ G++ G + R + GI + VVD+ + G +++A+
Sbjct: 225 GNGFVAASAVVACTGAGVLARGRE-VHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWH 283
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVG 350
+ + K T W ++G +H + IE E++ ++ + D V L+N+ ++
Sbjct: 284 VFKVLPTK-GLTSWNCMIGGLAVHGRC---KDAIELFHEMEREDVAPDDVTLVNVLTACA 339
Query: 351 DWEKVKELREFMN 363
V + + N
Sbjct: 340 HTGMVSDGHNYFN 352
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/510 (39%), Positives = 299/510 (58%), Gaps = 7/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLF-----EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
M+ + + SS EE LF E ++ + A K C L G QIHA
Sbjct: 358 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAH 417
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
++ G+ D + + ++D+Y A +F+ I D VAW +IS + N A
Sbjct: 418 AIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQA 477
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L ++ + +S PD+ T +++A + + ALE G ++H + + S + SL+
Sbjct: 478 LRIYHRM--RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLV 535
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCG++ A+ +FK M +++ W+AM+ GLA +G+ +A+ F +M+ G+ PD
Sbjct: 536 DMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRV 595
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+F G+LSACSH GL E +L M D+GI P I HY C+VD LGRAGL+ +A ++I +
Sbjct: 596 SFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIET 655
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M K ++I R LLGACRI V G+RV L L+ +S YVLL N+Y++ W+ V
Sbjct: 656 MPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDV 715
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+ R+ M K ++ PG S I +K ++H FVVDD SHP+ + IY ++E+ K ++ GYV
Sbjct: 716 TDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYV 775
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ L ++ EEK +L YHSEKLAIA+G+++TP TTIRV KNLR+C DCHN K +
Sbjct: 776 PDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYI 835
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S V+ RE+++RD RFHHFR+G CSC DYW
Sbjct: 836 SKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 11/314 (3%)
Query: 6 SMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
S + +EG +LF +R T + +K C+ L +H ++ G + D
Sbjct: 159 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 218
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ L+++YS + +A LFD + +RD V WN+++ Y++ ++A LF +R
Sbjct: 219 FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHR- 277
Query: 126 ESGCKPDDVTCLLVLQACAHLGA--LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
SG +PD+ + L+L C G LE G+++H + G S +++ NSL+ MYSK G
Sbjct: 278 -SGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 336
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL-- 241
A EVF M D++SW++MIS A + +++ F + G+ PD T +
Sbjct: 337 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLA 396
Query: 242 SACSHCG---LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+A CG L+D+G K G ++H ++D+ + G + A ++ +
Sbjct: 397 TAAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYIS 454
Query: 299 KPDSTIWRTLLGAC 312
PD W +++ C
Sbjct: 455 APDDVAWTSMISGC 468
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 12/293 (4%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L+ G HAR++ G D L L+ +YS A ++FD P+RD V WN ++
Sbjct: 92 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151
Query: 105 CYIRNQRTRDA-----LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
Y + + D L LF L R G +T VL+ C + G L E +H Y
Sbjct: 152 AYAASVDSNDGNAQEGLHLF-RLLRASLGSTTR-MTLAPVLKLCLNSGCLWAAEGVHGYA 209
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ G + + +L+ +YSKCG + A +F M E+DVV W+ M+ G G ++A
Sbjct: 210 IKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAF 269
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD-EGMMFLDRMSKDFGILPNIHHYGCVVD 278
+ F R+G+ PD+ + +L+ C G D E + ++ G+ ++ +V+
Sbjct: 270 QLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 329
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
+ + G A ++ M D W +++ +C +L E + I+L
Sbjct: 330 MYSKMGCAYFAREVFNDMK-HLDLISWNSMISSC---AQSSLEEESVNLFIDL 378
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + ++ LF + + ++ + A K C L G QIHA ++ G
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + ++D+Y A +F+ I D VAW +IS + N AL ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +S PD+ T +++A + + ALE G ++H + + S + SL+ MY+K
Sbjct: 121 RM--RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 178
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A+ +FK M +++ W+AM+ GLA +G+ +A+ F +M+ G+ PD +F G+
Sbjct: 179 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 238
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL E +L M D+GI P I HY C+VD LGRAGL+ +A ++I +M K
Sbjct: 239 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 298
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++I R LLGACRI V G+RV L L+ +S YVLL N+Y++ W+ V + R+
Sbjct: 299 SASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 358
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M K ++ PG S I +K ++H FVVDD SHP+ + IY ++E+ K ++ GYV +
Sbjct: 359 MMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEF 418
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK +L YHSEKLAIA+G+++TP TTIRV KNLR+C DCHN K +S V+
Sbjct: 419 VLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFE 478
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR+G CSC DYW
Sbjct: 479 REIVLRDANRFHHFRDGVCSCGDYW 503
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/475 (40%), Positives = 293/475 (61%), Gaps = 4/475 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + +E LF+ M + + + + C + S+ G Q+H+ + G
Sbjct: 194 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 253
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +++ L+DLYS + AC LF+ +P +D ++WN LI Y ++AL LF
Sbjct: 254 FGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 313
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMY 178
+ R SG P+DVT L +L ACAHLGA++ G IH YI + G + +L SLI MY
Sbjct: 314 EMLR--SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMY 371
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A +VF + K + SW+AMI G AM+G + + F M++ G+ PDD TF
Sbjct: 372 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFV 431
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G++D G M++D+ + P + HYGC++DLLG +GL +A ++I +M +
Sbjct: 432 GLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 491
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW +LL AC++H +V LGE ++LI+++ + G YVLL N+Y++ G W +V
Sbjct: 492 EPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANT 551
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +N+KG++ PGCS+I + VVHEF++ D HPR EIY ML+E+ L+ AG+V +
Sbjct: 552 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 611
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
+ L + E K AL +HSEKLAIAFG+++T PGT + + KNLR+C +CH K
Sbjct: 612 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 176/349 (50%), Gaps = 39/349 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M R +++SS P L+ M + N + F +K C K + G QIH VL+ G
Sbjct: 62 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-------------------------- 94
LD + T+L+ +Y + +A K+FDE P R
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181
Query: 95 -----DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
D V+WN +IS Y ++AL LF ++ + + +PD+ T + V+ ACA G++
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK--TNVRPDESTMVTVVSACAQSGSI 239
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E G ++H +I +HG+GS + + N+LI +YSKCG L A +F+G+P KDV+SW+ +I G
Sbjct: 240 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGI 266
++A+ F M R+G P+D T +L AC+H G +D G +++D+ K G+
Sbjct: 300 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK--GV 357
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++D+ + G ++ A+Q+ S+ K S+ W ++ +H
Sbjct: 358 ANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMH 405
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 167/365 (45%), Gaps = 53/365 (14%)
Query: 52 IHARVLRDGYQLDSQLMTTLMD---LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
IHA++++ G + ++ L++ L F+ A +F+ I + + + WN + +
Sbjct: 9 IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ AL L+ + G P+ T +L++CA A + G++IH ++ + G +
Sbjct: 69 SSDPVSALKLY--VCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 169 NLCNSLIAMYSKCGSLGMAFEVF---------------KG----------------MPEK 197
+ SLI+MY + G L A +VF KG +P K
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
DVVSW+AMISG A G+ ++A+E F M + V PD+ T V+SAC+ G ++ G +
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-V 245
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
D G N+ ++DL + G L+ A L + K D W TL+G + H
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLIGG---YTH 301
Query: 318 VTLGERVIEHLIE-LKAQESGDYVLLLNLYSS--------VGDWEKV---KELREFMNEK 365
+ L + + E L++ E+ + V +L++ + +G W V K L+ N
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361
Query: 366 GLQTT 370
L+T+
Sbjct: 362 SLRTS 366
>gi|218185168|gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indica Group]
Length = 838
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/459 (40%), Positives = 283/459 (61%), Gaps = 9/459 (1%)
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
++L + D L L+D+++ + K+FD I D AWN L+S Y R R RD
Sbjct: 381 QILNNETSCDRVLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYAR-LRARD 439
Query: 115 ALC-------LFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
C + + R S KP+++T + V+ AC LGA+ G H Y +
Sbjct: 440 VACASSAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAV 499
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ +L+ MY+ CG L +A +VF ++D ++AM+ GLA++GHGR A+ F M
Sbjct: 500 NCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMH 559
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
GV D T V+ AC+H GLVDEG+ + DRM +FGI P+I HYGC+VD+L RAG L
Sbjct: 560 GEGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRL 619
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLY 346
+ A +LI M + P++ I+R+L+ AC IH + LG+++I L+ L+ +SG++VL+ N Y
Sbjct: 620 NDAEKLIHGMPIVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEPDDSGNHVLISNFY 679
Query: 347 SSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEIN 406
++ W+ K+ R+ M G+ +PG S + + GV+HEF+V D +HP EIY M+++I
Sbjct: 680 ATTNRWDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEIYAMVEDIE 739
Query: 407 KQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICV 466
+L G+ + +S L ++ E+K +ALSYHSE+LAIAF ++A+ PG IR+ KNLR+C
Sbjct: 740 TRLSECGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCA 799
Query: 467 DCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH AK++S VY RE+++RDR RFHHFR+G CSC D+W
Sbjct: 800 DCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 838
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
SS+ + +F +M I N I C + ++ G+ H ++ ++ +
Sbjct: 444 SSAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIV 503
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T L+++Y+ + A ++F RDT +N ++ + R AL LFD ++ E
Sbjct: 504 ATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMHGE-- 561
Query: 128 GCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G D VT L V+ ACAH G ++ G + R E G + ++ M S+ G L
Sbjct: 562 GVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRLND 621
Query: 187 AFEVFKGMP 195
A ++ GMP
Sbjct: 622 AEKLIHGMP 630
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 294/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y S E F LF +M KRIP + F + + C + G +H + +R
Sbjct: 267 MISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQ 326
Query: 59 DGYQLDSQLMT--TLMDLYSTFEKSFEACKLFDEIPQRDTVAWN---------------- 100
+ ++ L L+ LYS K A K+FD + +D V+WN
Sbjct: 327 PDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAA 386
Query: 101 ---------------VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
V++S Y+ DAL LF+ + E+ KP D T + AC
Sbjct: 387 RIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSED--VKPCDYTYAGAVAACGE 444
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G+++H ++ + G+ + + N+L+ MY++CG++ A VF MP D VSW+AM
Sbjct: 445 LGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAM 504
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS L +GHGR+A+E F M G++PD +F +L+AC+H GLVD+G + + M +DFG
Sbjct: 505 ISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFG 564
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P HY ++DLLGRAG + +A LI +M +P IW +L CRI+ + LG
Sbjct: 565 ISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAA 624
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L ++ + G Y+LL N YS+ G W +R+ M ++G++ PGCS I + VH F
Sbjct: 625 DQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVF 684
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+V D HP +E+Y+ L+ + +++ GYV + L ++ EK L HSE+LA++F
Sbjct: 685 LVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSF 744
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L P G T+ V KNL+IC DCH +S RE+++RD RFHHF++G CSC +YW
Sbjct: 745 GLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
T+L+ Y+ + ++ FD +P +RDTV N +IS + R A+ +F +L +
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGE--KIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
+PDD + +L A + L ++H + + G G+ +++ N+LIA+Y KC +
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212
Query: 185 GM---AFEVFKGMPEKDVVSWS-------------------------------AMISGLA 210
G+ A +V MPEKD ++W+ AMISG
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LDRMSKDFGIL 267
+G +A E F M + PD+ TFT +LSAC++ G G R+ DF
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ +V L ++G + A ++ SM +K D W T+L
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTIL 373
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 158/407 (38%), Gaps = 75/407 (18%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
C G + +VL + + D TT++ + A F+EI V WN +I
Sbjct: 209 CDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMI 268
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYI 159
S Y+++ +A LF + + PD+ T +L ACA+ G G+ +H R
Sbjct: 269 SGYVQSGMCAEAFELFRRMVSKR--IPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQ 326
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA--------------- 204
+ + + + N+L+ +YSK G + +A ++F M KDVVSW+
Sbjct: 327 PDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAA 386
Query: 205 ----------------MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
M+SG G DA++ F M+ V P D T+ G ++AC G
Sbjct: 387 RIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELG 446
Query: 249 LVDEGMMFLDRM------------------------SKD----FGILPNIH--HYGCVVD 278
+ G + KD F ++PN+ + ++
Sbjct: 447 ALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMIS 506
Query: 279 LLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
LG+ G +A +L M G+ PD + T+L AC V G + E +
Sbjct: 507 ALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGIS 566
Query: 336 SGD--YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKG 380
G+ Y L++L G ++ E R+ + + TP L G
Sbjct: 567 PGEDHYARLIDLLGRAG---RIGEARDLIKTMPFEPTPAIWEAILSG 610
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 294/521 (56%), Gaps = 53/521 (10%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+ C + + G +H +R G D + L+D+Y+ EA K+FD I ++D
Sbjct: 20 LPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDV 79
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREES--------------------GC------- 129
V+WN +++ Y + R DAL LF+ + REE+ GC
Sbjct: 80 VSWNAMVNGYSQIGRFEDALGLFEKM-REENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138
Query: 130 ------------------------KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
KP+ T L ACA L AL G +IH YI + +
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFD 198
Query: 166 SK-MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
S + + N LI MY+K G + +A VF + +K+ VSW+++++G M+G G++A+E F
Sbjct: 199 SAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDE 258
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M+R G+ PD T VL ACSH G++D+G+ F + MSK+FG++P HY C+VDLLGRAG
Sbjct: 259 MRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAG 318
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
L++A +LI M ++P S +W LL CRIH +V LGE + L+EL ++ G Y LL N
Sbjct: 319 RLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSN 378
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+Y++ W+ V +R M G++ PGCS + K F V D +HP+ +IY++L
Sbjct: 379 IYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRS 438
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
+ +++K+ GYV E + LH++ EEK + L HSEKLA+A+G+L + PG IR+ KNLR+
Sbjct: 439 LTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRV 498
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCHN +S + + E+I+RD RFHHF++G CSC+ YW
Sbjct: 499 CGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM---TTLMDLYSTFEKSF 82
+ N F S A+ C + +L G QIHA +LR+ DS + L+D+Y+
Sbjct: 162 VKPNCFTISCALIACARLAALRLGRQIHAYILRN--HFDSAFLYVANCLIDMYAKSGDID 219
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
A +FD + Q++ V+W L++ Y + R ++AL +FD + R G +PD VT L+VL A
Sbjct: 220 VARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRR--VGLQPDGVTLLVVLYA 277
Query: 143 CAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVV 200
C+H G ++ G + +S E G ++ + + G L A E+ +GM E +
Sbjct: 278 CSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSI 337
Query: 201 SWSAMISG 208
W A++SG
Sbjct: 338 VWVALLSG 345
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 28/245 (11%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+PD V+ + VL ACA +GA G+ +H G + + N+L+ MY+KCG + A +
Sbjct: 10 RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASK 69
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF + EKDVVSW+AM++G + G DA+ F M+ + + +++ V++A + GL
Sbjct: 70 VFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGL 129
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG-----VKPDSTI 304
G LD + + H G + A +L + M VKP+
Sbjct: 130 ---GCETLD-------VFREMQH-----------GEANDALELFSWMFKQDGLVKPNCFT 168
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--LLNLYSSVGDWEKVKELREFM 362
L AC + LG ++ +++ + YV L+++Y+ GD + + + + +
Sbjct: 169 ISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNL 228
Query: 363 NEKGL 367
+K
Sbjct: 229 KQKNF 233
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/445 (42%), Positives = 270/445 (60%), Gaps = 5/445 (1%)
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +D + ++D E A +F+++ RD V WN +I Y+R R +AL LF
Sbjct: 72 WSIDLVELNLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFR 131
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+N+ S +PD T V+ CA LGAL+ + +H + E L ++LI MYSK
Sbjct: 132 FMNK--SNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSK 189
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E+F G+ +V W+AMISGLA++G DAI+ F M+ V PD TF G+
Sbjct: 190 CGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGI 249
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSHCGLV EG + D M + + P+I HYG +VDLLGRAGLL++A+ +I SM ++P
Sbjct: 250 LTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEP 309
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IWR LLGACR +K LGE + ++ L+ SGDYVLL N+Y S W+ + + E
Sbjct: 310 DVVIWRALLGACRTYKKPELGEAAMANISRLR---SGDYVLLSNIYCSQKRWDTAQGVWE 366
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KG+ G S G +H F D SHP IY+ML+ + ++ K+AGYV
Sbjct: 367 MMKKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDL 426
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++ EEK L +HSEKLA+A+G+L T G +R++KNLRIC DCH++ K++S + +
Sbjct: 427 VTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLS 486
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RDR+RFH F G CSC DYW
Sbjct: 487 RVIIVRDRIRFHRFENGLCSCGDYW 511
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + EE LF M + + + + + I C K +L +H ++
Sbjct: 113 MIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKR 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L+ L + L+D+YS K A ++FD + + + WN +IS + DA+ +F
Sbjct: 173 IELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFT 232
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ E PD +T L +L AC+H G ++ G K + S + + +++ +
Sbjct: 233 KM--EVENVLPDAITFLGILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLG 290
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L AF + K MP E DVV W A++
Sbjct: 291 RAGLLEEAFAMIKSMPMEPDVVIWRALLGA 320
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 296/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A++ + P + LF M + + F + C + L G +IH +LR+G
Sbjct: 473 LIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNG 532
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD + +LM LY +FD++ + V WNV+I+ + +N+ +AL F
Sbjct: 533 LELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFR 592
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G KP ++ VL AC+ + AL G+++H + + + +LI MY+K
Sbjct: 593 QM--LSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAK 650
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + + +F + EKD W+ +I+G ++GHG AIE F MQ G PD TF GV
Sbjct: 651 CGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGV 710
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+H GLV EG+ +L +M +G+ P + HY CVVD+LGRAG L +A +L+ M +P
Sbjct: 711 LIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEP 770
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS IW +LL +CR + + +GE V + L+EL+ ++ +YVLL NLY+ +G W++V+++R+
Sbjct: 771 DSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQ 830
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E GL GCS I + G+V+ F+V D S +I Q ++ K++ GY + +
Sbjct: 831 RMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSC 890
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH L E K L HSEKLAI+FG+L T GTT+RV KNLRICVDCHN K++S V
Sbjct: 891 VLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVK 950
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF+ G C+C D+W
Sbjct: 951 RDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 161/366 (43%), Gaps = 41/366 (11%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
I C + G+ +H + G + + +L+D+YS EA LFD ++
Sbjct: 306 IPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNV 365
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+WN +I Y + R L + REE + ++VT L VL AC+ L ++IH
Sbjct: 366 VSWNTIIWGYSKEGDFRGVFELLQEMQREEK-VRVNEVTVLNVLPACSGEHQLLSLKEIH 424
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
Y HG+ + N+ +A Y+KC SL A VF GM K V SW+A+I A NG
Sbjct: 425 GYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPG 484
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKD--FGILPN 269
+++ F M +G+ PD T +L AC+ CG G M + + D GI
Sbjct: 485 KSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLM 544
Query: 270 IHHYGCVVDLLGRAGLLDQ---------------------------AYQLITSMGVKPDS 302
+ C LLG+ + D+ ++ + S G+KP
Sbjct: 545 SLYIQCSSMLLGKL-IFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQE 603
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELR 359
+LGAC + LG+ V H LKA S D + L+++Y+ G E+ + +
Sbjct: 604 IAVTGVLGACSQVSALRLGKEV--HSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIF 661
Query: 360 EFMNEK 365
+ +NEK
Sbjct: 662 DRVNEK 667
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 15/286 (5%)
Query: 32 ACSFAIKCCMKFCSLMGGLQIHARV-----LRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
A ++ C ++ G ++HA V LR+ D L T ++ +YS ++
Sbjct: 94 AIGILLRACGHHKNIHVGRKVHALVSASHKLRN----DVVLSTRIIAMYSACGSPSDSRG 149
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD ++D +N L+S Y RN RDA+ LF L + PD+ T V +ACA +
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL-LSATDLAPDNFTLPCVAKACAGV 208
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+E GE +H + G S + N+LIAMY KCG + A +VF+ M +++VSW++++
Sbjct: 209 ADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVM 268
Query: 207 SGLAMNGHGRDAIESFGAM---QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+ NG + F + + G+ PD T V+ AC+ G V GM+ + ++
Sbjct: 269 YACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMV-VHGLAFK 327
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
GI + +VD+ + G L +A L G K + W T++
Sbjct: 328 LGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK-NVVSWNTII 372
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ YS ++ + LF E + + + F K C + G +HA L+
Sbjct: 165 LLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKA 224
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D+ + L+ +Y A K+F+ + R+ V+WN ++ N + +F
Sbjct: 225 GGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVF 284
Query: 120 DNL-NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
L EE G PD T + V+ ACA +G + G +H + G ++ + NSL+ MY
Sbjct: 285 KRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMY 344
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTF 237
SKCG LG A +F K+VVSW+ +I G + G R E MQR V ++ T
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404
Query: 238 TGVLSACS 245
VL ACS
Sbjct: 405 LNVLPACS 412
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 138 LVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
++L+AC H + G K+H +S H + + L +IAMYS CGS + VF E
Sbjct: 97 ILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFTGVLSACSHCGLVDEGMM 255
KD+ ++A++SG + N RDAI F + A + PD+ T V AC+ V+ G
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ ++ G + ++ + G+ G ++ A ++ +M + + W +++ AC
Sbjct: 217 -VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVMYAC 271
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + ++ LF + + ++ + A K C L G QIHA ++ G
Sbjct: 1078 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 1137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + ++D+Y A +F+ I D VAW +IS + N AL ++
Sbjct: 1138 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 1197
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +S PD+ T +++A + + ALE G ++H + + S + SL+ MY+K
Sbjct: 1198 RM--RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 1255
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A+ +FK M +++ W+AM+ GLA +G+ +A+ F +M+ G+ PD +F G+
Sbjct: 1256 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 1315
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL E +L M D+GI P I HY C+VD LGRAGL+ +A ++I +M K
Sbjct: 1316 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 1375
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++I R LLGACRI V G+RV L L+ +S YVLL N+Y++ W+ V + R+
Sbjct: 1376 SASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 1435
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M K ++ PG S I +K ++H FVVDD SHP+ + IY ++E+ K ++ GYV +
Sbjct: 1436 MMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEF 1495
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK +L YHSEKLAIA+G+++TP TTIRV KNLR+C DCHN K +S V+
Sbjct: 1496 VLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFE 1555
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR+G CSC DYW
Sbjct: 1556 REIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 5/265 (1%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+H ++ G D + +L+++YS ++ A ++F+++ D ++WN +IS +
Sbjct: 923 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 982
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL-GALEFGEKIHRYISEHGYGSK 167
+ +++ LF +L E G KPD T VL+AC+ L L +IH + + G +
Sbjct: 983 SSLEEESVNLFIDLLHE--GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIAD 1040
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ +LI +YSK G + A +F+ + D+ W+AM+ G + G+ A+E F + +
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHK 1100
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+G D T AC L+D+G K G ++H ++D+ + G +
Sbjct: 1101 SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCGDMV 1159
Query: 288 QAYQLITSMGVKPDSTIWRTLLGAC 312
A + + PD W +++ C
Sbjct: 1160 NAGIVFNYISA-PDDVAWTSMISGC 1183
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ + +L+ G HAR++ G D L L+ +YS A ++FD P+RD
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687
Query: 97 VAWNVLISCYIRNQRTRDA-----LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
V WN ++ Y + + D L LF L R G +T VL+ C + G L
Sbjct: 688 VTWNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTR-MTLAPVLKLCLNSGCLWA 745
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
E +H Y + G + + +L+ +YSKCG + A +F M E+DVV W+ M+ G
Sbjct: 746 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
G ++A + F R+G+ PD+ + +L+ S DEG D++
Sbjct: 806 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNW-DEGKWLADQV 853
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
L D+ P D WN +S + A+ F N+N D VT L+VL A A
Sbjct: 862 LSDDNP--DVFCWNKKLSECLWAGDNWGAIECFVNMN--GLNIDYDAVTLLVVLAAVAGT 917
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
LE G+++H + G S +++ NSL+ MYSK G A EVF M D++SW++MI
Sbjct: 918 DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI 977
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
S A + +++ F + G+ PD T VL ACS
Sbjct: 978 SSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 135/326 (41%), Gaps = 32/326 (9%)
Query: 6 SMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
S + +EG +LF +R T + +K C+ L +H ++ G + D
Sbjct: 703 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 762
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ L+++YS + +A LFD + +RD V WN+++ Y++ ++A LF +R
Sbjct: 763 FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHR- 821
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
SG +PD+ + L+L + + E G+ + + Y +K++L +
Sbjct: 822 -SGLRPDEFSVQLILNGVSEVNWDE-GKWLADQV--QAYAAKLSLSDD------------ 865
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
DV W+ +S G AIE F M + D T VL+A +
Sbjct: 866 ----------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVA 915
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
++ G + ++ G+ ++ +V++ + G A ++ M D W
Sbjct: 916 GTDDLELGKQ-VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISW 973
Query: 306 RTLLGACRIHKHVTLGERVIEHLIEL 331
+++ +C +L E + I+L
Sbjct: 974 NSMISSC---AQSSLEEESVNLFIDL 996
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 296/490 (60%), Gaps = 7/490 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +MR+ R+ N F S +K + QIHA+V++ YQ + T L+ YS
Sbjct: 391 LFSRMREDRVMPNEFTYSAMLKASLSILPP----QIHAQVIKTNYQHIPSVGTALLASYS 446
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
F + +A +F I Q+D VAW+ ++SC+ + A LF+ + + G KP++ T
Sbjct: 447 KFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQ--GIKPNEFTI 504
Query: 137 LLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
V+ ACA A ++ G + H ++ Y + + ++L++MYS+ G++ A VF+
Sbjct: 505 SSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQT 564
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D+VSW++MISG A +G+ AIE+F M+ +G+ D TF V+ C+H GLV EG
Sbjct: 565 DRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ D M +D I P + HY C+VDL RAG LD+ LI M + +WRTLLGACR+H
Sbjct: 625 YFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVH 684
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
K+V LG+ + L+ L+ +S YVLL N+Y++ G W++ E+R+ M+ + ++ GCS
Sbjct: 685 KNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSW 744
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +K VH F+ D SHP ++IY+ L I +LK GY + LH++ ++K L
Sbjct: 745 IQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLV 804
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSE+LA+AFG++ATPPGT +++ KNLR+C DCH K++S + +RE+I+RD RFHHF
Sbjct: 805 AHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFN 864
Query: 496 EGRCSCNDYW 505
G CSC D+W
Sbjct: 865 GGACSCGDFW 874
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 3/232 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +MR + I NPF + + +L G ++HA+ ++ G + + +LM
Sbjct: 184 EVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLM 243
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ +A +F+ + RD V+WN L++ N+ +AL LF +R G K
Sbjct: 244 NMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE-SRATMG-KMT 301
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T V++ CA+L L ++H + +HG+ N+ +L YSKCG L A +F
Sbjct: 302 QSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFS 361
Query: 193 -GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
++VVSW+A+ISG NG A+ F M+ V P++ T++ +L A
Sbjct: 362 MTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL-DSQLMTTLMDLYS 76
F R+ + + S +K C + G Q+H ++ G+ + T+L+D+Y
Sbjct: 87 FSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYM 146
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
E ++F+ +P+++ V W L++ Q + + LF + E G P+ T
Sbjct: 147 KCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAE--GIWPNPFTF 204
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL A A GAL+ G+++H + G S + +CNSL+ MY+KCG + A VF M
Sbjct: 205 ASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMET 264
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
+D+VSW+ +++GL +N +A++ F + T+ V+ C++
Sbjct: 265 RDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCAN 314
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG---GLQIHARVL 57
M+ ++ + E YLF KM + I N F S I C C G G Q HA +
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA--CPSAGVDQGRQFHAISI 529
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+ Y + + L+ +YS A +F+ RD V+WN +IS Y ++ + A+
Sbjct: 530 KYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIE 589
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIA 176
F + E SG + D VT L V+ C H G + G++ + +H M ++
Sbjct: 590 TFRQM--EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVD 647
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
+YS+ G L + + MP + W ++ A H + F A + + P D
Sbjct: 648 LYSRAGKLDETMSLIRDMPFPAGAMVWRTLLG--ACRVHKNVELGKFSADKLLSLEPHDS 705
Query: 236 TFTGVLS 242
+ +LS
Sbjct: 706 STYVLLS 712
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 299/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + P F KM+ + + + +H ++R G
Sbjct: 345 IIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRG 404
Query: 61 YQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ +++ ++ +MD+Y+ A K+F+ IP +D V+WN LIS Y +N +A+ ++
Sbjct: 405 WLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY 464
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E K + T + +L A AH+GAL+ G +IH ++ + + + LI +Y
Sbjct: 465 -RMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYG 523
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A +F +P + V W+A+IS ++GHG A++ F MQ GV PD TF
Sbjct: 524 KCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFIS 583
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLVDEG F M +++GI P++ HYGC+VDLLGRAG L+ AY I M +
Sbjct: 584 LLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLH 642
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD++IW LLGACRIH ++ LG+ + L E+ ++ G YVLL N+Y++VG WE V ++R
Sbjct: 643 PDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVR 702
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
E+GL+ TPG S+I + V F + SHP+ EIY L + ++K GY+ + +
Sbjct: 703 SLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYS 762
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ +EK + L+ HSE+LAIAFG+++TPP + IR+ KNLR+C DCHN K +S +
Sbjct: 763 FVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRIT 822
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC DYW
Sbjct: 823 EREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 8/320 (2%)
Query: 35 FAIKCCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
+ +K C +L+ G +IH V + G+Q D + +L+ +YS F A LFD++P
Sbjct: 176 YTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPF 235
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
RD +WN +IS I+N AL + D + E G D VT +L CA LG +
Sbjct: 236 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLE--GINMDSVTVASILPVCAQLGDISTAT 293
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
IH Y+ +HG ++ + N+LI MY+K G+LG A +VF+ M +DVVSW+++I+ N
Sbjct: 294 LIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQND 353
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
A F MQ G+ PD T + S + + + ++ +
Sbjct: 354 DPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIG 413
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR---IHKHVTLGERVIEHLIE 330
V+D+ + G++D A+++ + VK D W TL+ + R++E E
Sbjct: 414 NAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISGYTQNGLASEAIEVYRMMEECRE 472
Query: 331 LKAQESGDYVLLLNLYSSVG 350
+K + G +V +L Y+ VG
Sbjct: 473 IKLNQ-GTWVSILAAYAHVG 491
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 190/409 (46%), Gaps = 25/409 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + + + ++MR + I + + + C + + IH V++ G
Sbjct: 244 MISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHG 303
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+++Y+ F +A K+F ++ RD V+WN +I+ Y +N A F
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF- 362
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYS 179
+ +G +PD +T + + A + +H +I G+ + + N+++ MY+
Sbjct: 363 -FKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYA 421
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-TFT 238
K G + A +VF +P KDVVSW+ +ISG NG +AIE + M+ +Q T+
Sbjct: 422 KLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWV 481
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L+A +H G + +GM + K + ++ C++DL G+ G L A L +
Sbjct: 482 SILAAYAHVGALQQGMRIHGHLIKT-NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP- 539
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYSSVGDWEKV 355
+ S W ++ IH H GE+ ++ E+ Q+ G D+V ++L S+ V
Sbjct: 540 RESSVPWNAIISCHGIHGH---GEKALKLFREM--QDEGVKPDHVTFISLLSACSHSGLV 594
Query: 356 KELREF---MNEKGLQTT---PGC-----STIGLKGVVHEFVVDDVSHP 393
E + F M E G++ + GC G + ++F+ D HP
Sbjct: 595 DEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHP 643
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 6/261 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
++HA ++ G + + L++LY++ + FD+I ++D WN +IS Y+RN
Sbjct: 94 RLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNG 153
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R+A+ F L + + D T VL+AC L G KIH ++ + G+ + +
Sbjct: 154 HFREAIDCFYQL-LLVTKFQADFYTFPPVLKACQ---TLVDGRKIHCWVFKLGFQWDVFV 209
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SLI MYS+ G +G+A +F MP +D+ SW+AMISGL NG+ A++ M+ G+
Sbjct: 210 AASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 269
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T +L C+ G + + + K G+ + ++++ + G L A
Sbjct: 270 NMDSVTVASILPVCAQLGDISTATLIHLYVIKH-GLEFELFVSNALINMYAKFGNLGDAQ 328
Query: 291 QLITSMGVKPDSTIWRTLLGA 311
++ M ++ D W +++ A
Sbjct: 329 KVFQQMFLR-DVVSWNSIIAA 348
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+ +Y+ G + ++ F + KDV +W++MIS NGH R+AI+ F + F
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 234 D-QTFTGVLSACS--------HCGLVDEGMMF-------LDRMSKDFGI----------L 267
D TF VL AC HC + G + L M FG +
Sbjct: 174 DFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDM 233
Query: 268 P--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACR----IHKHV 318
P ++ + ++ L + G QA ++ M G+ DS ++L C I
Sbjct: 234 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTAT 293
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ VI+H +E + S + + + ++GD +KV
Sbjct: 294 LIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 299/538 (55%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y+ E F +F KM +I + F + I C G ++HA L+
Sbjct: 260 MISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTV 319
Query: 59 --DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ + L+ Y K A ++F+++P+RD V+WN+++S Y+ + +A
Sbjct: 320 ANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAK 379
Query: 117 CLFDNL----------------------------NREE-SGCKPDDVTCLLVLQACAHLG 147
F+ + NR + G +P D + +C+ LG
Sbjct: 380 SFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLG 439
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
+L+ G ++H + +GY S ++ N+LI MY++CG + A +F MP D +SW+AMI+
Sbjct: 440 SLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIA 499
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +G G AIE F M + G+ PD +F V+SACSH GLV EG + D M +G+
Sbjct: 500 ALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVN 559
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P+ HY ++DLL RAG +A +++ SM +P + IW LL CRIH ++ LG E
Sbjct: 560 PDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAER 619
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L ELK Q G YVLL N+Y+ G W + ++R+ M ++G++ PGCS I ++ VH F+V
Sbjct: 620 LFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLV 679
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D +HP + +IY L+++ +++ GYV + LH++ ++ K + LS HSEKLA+A+G
Sbjct: 680 GDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGF 739
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ P G T+RV KNLRIC DCHN K +S V RE+++RD RFHHFR+G+CSC DYW
Sbjct: 740 MKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 176/447 (39%), Gaps = 98/447 (21%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL---------- 50
M+ AYS + LF M++ + + F S++G L
Sbjct: 118 MITAYSHNHDGHAAIELFCDMQRDNFRPDNYT----------FTSVLGALALVAEKEKHC 167
Query: 51 -QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF---------EACKLFDEIPQRDTVAWN 100
Q+H V++ G + ++ L+ Y S EA KLFDE+P RD ++W
Sbjct: 168 QQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWT 227
Query: 101 VLISCYIRNQRTRDALCLFDNLNRE-----------------------------ESGCKP 131
+I+ Y++N A + +++ S +
Sbjct: 228 TIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQL 287
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRY----ISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
D+ T V+ CA+ G G+++H Y ++ M + N+LI Y KCG + +A
Sbjct: 288 DEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIA 347
Query: 188 FEVFKGMPEKDVVSWS-------------------------------AMISGLAMNGHGR 216
E+F MPE+D+VSW+ MISGLA G
Sbjct: 348 QEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAE 407
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+A++ F M+ G P D F G + +CS G + G ++ + +G ++ +
Sbjct: 408 EALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVR-YGYESSLSAGNAL 466
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
+ + R G++D A+ L +M D+ W ++ A H T + E + LK
Sbjct: 467 ITMYARCGVVDAAHCLFINMPCV-DAISWNAMIAALGQHGQGTQAIELFEEM--LKEGIL 523
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMN 363
D + L + S+ VKE R++ +
Sbjct: 524 PDRISFLTVISACSHAGLVKEGRKYFD 550
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 173/451 (38%), Gaps = 94/451 (20%)
Query: 25 RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
R N + I C S +HA ++ G+Q ++ L+D+YS K A
Sbjct: 8 RTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYA 67
Query: 85 CKLFDEIPQ---------------------------------RDTVAWNVLISCYIRNQR 111
LFDEIPQ RD+V +N +I+ Y N
Sbjct: 68 RYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHD 127
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE-FGEKIHRYISEHGYGSKMNL 170
A+ LF ++ R+ +PD+ T VL A A + E +++H + + G G ++
Sbjct: 128 GHAAIELFCDMQRD--NFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSV 185
Query: 171 CNSLIAMYSKCGS---------LGMAFEVFKGMPEKDVVSWS------------------ 203
N+LI+ Y KC + + A ++F MP +D +SW+
Sbjct: 186 LNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEF 245
Query: 204 -------------AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
AMISG A G +A E F M + + D+ TFT V+S C++ G
Sbjct: 246 LNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCF 305
Query: 251 DEG----MMFLDRMSK---DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
G FL ++ D + N ++ + G +D A ++ M + D
Sbjct: 306 RLGKEMHAYFLKTVANPAPDVAMPVN----NALITFYWKCGKVDIAQEIFNKMPER-DLV 360
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
W +L + +V + E+ + ++++++ + +G E E +F N
Sbjct: 361 SWNIILSG---YVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAE---EALKFFN 414
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPR 394
LQ C ++ V+ + H R
Sbjct: 415 RMKLQGFEPCDYAFAGAIISCSVLGSLKHGR 445
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 290/506 (57%), Gaps = 24/506 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + L ++M ++ + + A + + C + SL G +H + +
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + LMD+Y+ A +F + +D ++WN +I
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---------------- 426
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
KPD T VL ACA L ALE G++IH YI +GY S ++ N+L+ +Y K
Sbjct: 427 -------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG LG+A +F +P KD+VSW+ MI+G M+G+G +AI +F M+ AG+ PD+ +F +
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G F M DF I P + HY C+VDLL R G L +AY+ + ++ + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAP 599
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CR + + L E+V E + EL+ + +G YVLL N+Y+ WE+VK LRE
Sbjct: 600 DATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLRE 659
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVV-DDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ ++GL+ PGCS I +KG V+ FV ++ SHP I +L ++ +++K G+ +
Sbjct: 660 KIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTK 719
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N +K AL HSEKLA+AFG+L PP TIRV KNLR+C DCH AK +S
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC +W
Sbjct: 780 RREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
E +FE LFD++ RD ++WN +IS Y+ N T L ++ + G D T +
Sbjct: 202 ESAFE---LFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY--LGIDVDLATIIS 256
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL CA+ G L G+ +H + + ++N N+L+ MYSKCG L A VF+ M E++
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 316
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW++MI+G +G AI+ M++ GV D T +L AC+ G +D G D
Sbjct: 317 VVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 376
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ + + N+ ++D+ + G ++ A + ++M VK D W T++G +
Sbjct: 377 YIKAN-NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Query: 319 TLGERVIEHLIELKAQESGDYV---LLLNLYSS 348
V+ L A E G + +L N YSS
Sbjct: 435 MAC--VLPACASLSALERGKEIHGYILRNGYSS 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 28/332 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + E G ++++M I + + C +L G +H+ ++
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ TL+D+YS A ++F+++ +R+ V+W +I+ Y R+ R+ A+ L
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G K D V +L ACA G+L+ G+ +H YI + S + +CN+L+ MY+K
Sbjct: 342 QMEKE--GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF M KD++SW+ MI L PD +T V
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGELK---------------------PDSRTMACV 438
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ ++ G + ++ G + H +VDL + G+L A +L+ M
Sbjct: 439 LPACASLSALERGKEIHGYILRN-GYSSDRHVANALVDLYVKCGVLGLA-RLLFDMIPSK 496
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
D W ++ +H + G I E++
Sbjct: 497 DLVSWTVMIAGYGMHGY---GNEAIATFNEMR 525
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 113/286 (39%), Gaps = 31/286 (10%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VLQ CA L + G+K+H I + G L L++ Y+ CG L VF M +K+
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+ M+S A G +++I F M G+ + D
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRP---------------ESAFELFD 209
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ I N G V + L GL Y+ + +G+ D ++L C +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGL--GIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 319 TLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
+LG+ V I+ + ++ LL++YS GD + + E M E+ + +
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV--------VS 319
Query: 378 LKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
++ + D S I + QM E + V ITS LH
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKE-----GVKLDVVAITSILH 360
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 297/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + P + +L +M + F S + C SL G +IH VLR+G
Sbjct: 422 LIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG 481
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T+L+ Y K+ A LFD + ++ V+WN +IS Y +N ++L LF
Sbjct: 482 LETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFR 541
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
E G + ++ + V AC+ L AL G++ H Y+ + + S+I MY+K
Sbjct: 542 KSLSE--GIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAK 599
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + + +VF G+ +K+V SW+A+I ++GHG++AIE + M++ G PD T+ G+
Sbjct: 600 SGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGI 659
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GLV+EG+ + M I P + HY C++D+L RAG LD A +L+ M +
Sbjct: 660 LMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEA 719
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ IW +LL +CR + +GE+V + L+EL+ ++ +YVLL NLY+ +G W+ V+ +R+
Sbjct: 720 DNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQ 779
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E GLQ GCS I + G V+ FVV D P+ EI + + +++ GY +S
Sbjct: 780 MMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSS 839
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH +G EEK + L HSEKLAI+FG+L T GTT+R+ KNLRIC DCHN AK++S
Sbjct: 840 VLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVE 899
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR+G CSC DYW
Sbjct: 900 REIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 152/306 (49%), Gaps = 12/306 (3%)
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D L T L+ +Y+ ++ +FD + ++ + WN L+S Y RN D + +F
Sbjct: 75 YRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFM 134
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+L ++ +PD+ T V++AC + + GE IH + + G + + N+L+ MY K
Sbjct: 135 DL-VSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGK 193
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTG 239
CG++ A +VF MPE ++VSW++MI + NG RD+ + M G+ PD T
Sbjct: 194 CGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVT 253
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L C+ G VD GM + ++ G+ + +V + + G L++A Q+
Sbjct: 254 ILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEA-QMSFVKNNN 311
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLI----ELKAQESGDYVLLLNLYSSVGDWEKV 355
+ W T++ A + V +++ + E+KA E V +LN+ + D ++
Sbjct: 312 KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANE----VTILNVLPACLDKLQL 367
Query: 356 KELREF 361
+ L+E
Sbjct: 368 RSLKEL 373
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 12/329 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ A+S+ E F L ++M + + + N + C+ L ++H R
Sbjct: 320 MISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFR 379
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+Q +L + Y+ A K+F I + +WN LI + +N R AL L
Sbjct: 380 HCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHL 438
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ SG +PD T +L ACAHL +L++G++IH Y+ +G + + SL++ Y
Sbjct: 439 LFQMTY--SGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHY 496
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
CG A +F M +K++VSW+AMISG + NG +++ F G+ +
Sbjct: 497 IHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIV 556
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC-VVDLLGRAGLLDQAYQLITSMG 297
V ACS + G + K + GC ++D+ ++G + ++ ++ +
Sbjct: 557 SVFGACSQLSALRLGKEAHGYVLK--ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK 614
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIE 326
K ++ W ++ A IH H G+ IE
Sbjct: 615 DKNVAS-WNAIIVAHGIHGH---GKEAIE 639
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI---------------------------------P 27
+++ Y+M SP + +F+ M K + P
Sbjct: 85 LIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQP 144
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
N F IK C + G IH V++ G LD + L+ +Y EA K+
Sbjct: 145 DN-FTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKV 203
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FD +P+ + V+WN +I + N +RD+ L + EE G PD VT + +L CA G
Sbjct: 204 FDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEE-GLLPDVVTVVTILPVCAGEG 262
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
++ G IH + G ++ + N+++ MYSKCG L A F K+VVSW+ MIS
Sbjct: 263 EVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMIS 322
Query: 208 GLAMNGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSAC 244
++ G +A MQ G + ++ T VL AC
Sbjct: 323 AFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G+ IH ++ G + + ++ +YS EA F + ++ V+WN +IS +
Sbjct: 267 GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSL 326
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+A L + + K ++VT L VL AC L +++H Y H + +
Sbjct: 327 EGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHV 385
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
L N+ I Y+KCG+L A +VF G+ +K V SW+A+I G A NG R A+ M +
Sbjct: 386 ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYS 445
Query: 229 GVFPDDQTFTGVLSACSH 246
G PD T + +L AC+H
Sbjct: 446 GQQPDWFTISSLLLACAH 463
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHG-YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L+LQAC + +E G ++H+++S+ Y + L LI MY+ CGS + VF M
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCGLVDEGM- 254
K+++ W+A++SG NG D ++ F + F PD+ TF V+ AC G++D +
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACG--GILDVRLG 165
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGA 311
+ M G++ ++ +V + G+ G +D+A ++ M P++ + W +++ A
Sbjct: 166 EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFM---PETNLVSWNSMICA 221
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 300/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + +E +LF+ M + + N AI C S G +HA +
Sbjct: 98 IIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKR 157
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + T+L++++ + A +FD +P+++ V WN +++ Y +N + + A+ +F
Sbjct: 158 LESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFR 217
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G +PD VT L ++ ACA L A G +H I+ G + L +++ Y K
Sbjct: 218 FMDLE--GVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGK 275
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A +F + +K+ V+WSA+++ A NG+ +AIE + M + G+ + TF G+
Sbjct: 276 CGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGL 335
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH G +G+ + M +DFG++P HY ++DLLGR+G L + LI SM +P
Sbjct: 336 LFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEP 395
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS+ W LLGACR+H V G R+ E + EL ++SG Y+LL NLYSS G ++ + R+
Sbjct: 396 DSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRK 455
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G+ PG S+I +K VHEF+ HP++ I+ ++ + ++K AGYVA++ +
Sbjct: 456 AMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRA 515
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ EEK L YHSE+LAIAFG+++TPPGT + + KNLR+C DCH K +S V
Sbjct: 516 VLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVG 575
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD +RFHHF G CSC DYW
Sbjct: 576 RKIVVRDAIRFHHFENGACSCGDYW 600
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 6/277 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-- 94
+K C +L+ G ++H+ +++DGY D + L+++Y EA +FD+I ++
Sbjct: 31 LKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNA 90
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D ++WN +I Y +N ++AL LF ++ E G + VT + + ACA L + E G
Sbjct: 91 DVISWNGIIGAYTQNGLGKEALHLFKTMDLE--GVIANQVTLINAIDACASLPSEEEGRI 148
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H + S + SL+ M+ KC ++ A VF +P K++V+W+ M++ + N
Sbjct: 149 VHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQ 208
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
+ AI+ F M GV PD TF ++ AC+ EG M D ++ GI ++
Sbjct: 209 CKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS-GIPMDVALGT 267
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
V+ G+ G LD A + S+G K ++ W +L A
Sbjct: 268 AVMHFYGKCGRLDNARAIFDSLG-KKNTVTWSAILAA 303
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N NR + + T +L+L+ CA AL G+++H + + GY S + N LI MY K
Sbjct: 12 NGNRTVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGK 71
Query: 181 CGSLGMAFEVFKGMPEK--DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
CG + A VF + EK DV+SW+ +I NG G++A+ F M GV + T
Sbjct: 72 CGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLI 131
Query: 239 GVLSACSHCGLVDEG-----MMFLDRMSKD----------FGILPNIHHYGCVVDLLGRA 283
+ AC+ +EG + R+ D FG N+ V D L R
Sbjct: 132 NAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRK 191
Query: 284 GLLD------------------QAYQLITSMGVKPDSTIWRTLLGAC 312
L+ Q ++ + GV+PD+ + T++ AC
Sbjct: 192 NLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDAC 238
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 298/507 (58%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ + Y + P E L++KMR + + F F +K + G +HA V++ G
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T L+ +Y F + A LF+ + +D VAWN ++ ++ + AL F+
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + D T + +L AC LG+LE GE+I+ + + + N+ + M+ K
Sbjct: 200 KMCAD--AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLK 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+ A +F+ M +++VVSWS MI G AMNG R+A+ F MQ G+ P+ TF GV
Sbjct: 258 CGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGV 317
Query: 241 LSACSHCGLVDEGMMFLDRM--SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
LSACSH GLV+EG + M S D + P HY C+VDLLGR+GLL++AY+ I M V
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD+ IW LLGAC +H+ + LG++V + L+E +VLL N+Y++ G W+ V ++
Sbjct: 378 EPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M + G + S++ +G +H F D SHP+ IY+ LDEI K+++ GYV +
Sbjct: 438 RSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDT 497
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
S H++ EEK +LS+HSEKLAIAFG++ PG IRV KNLR C DCH F+K +S +
Sbjct: 498 CSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSL 557
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+ E+I+RD+ RFHHFR G CSC ++W
Sbjct: 558 TSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 4/259 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+IHA VLR G+ + L+T L++ A ++FDE+ + WN L Y+RNQ
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
++L L+ + + G +PD+ T V++A + LG G +H ++ ++G+G +
Sbjct: 89 LPFESLLLYKKM--RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
L+ MY K G L A +F+ M KD+V+W+A ++ G+ A+E F M V
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T +LSAC G ++ G DR K+ I NI +D+ + G + A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE-EIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 291 QLITSMGVKPDSTIWRTLL 309
L M + + W T++
Sbjct: 266 VLFEEMKQR-NVVSWSTMI 283
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+KIH + G+ K +L L+ G + A +VF M + + W+ + G N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-DFGILPNIH 271
+++ + M+ GV PD+ T+ V+ A S G G + K FG L +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+V + + G L A L SM VK D W L C
Sbjct: 148 TE--LVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVC 185
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 283/505 (56%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ ++ E LF+++ N + I F L IH + G
Sbjct: 279 MISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSG 338
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+S + T L +YS + A LFDE ++ +WN +IS Y +N T A+ LF
Sbjct: 339 VVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQ 398
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + E +P+ VT +L ACA LGAL G+ +H I+ + S + + +LI MY+K
Sbjct: 399 EMQKCE--VRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAK 456
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F MPEK+ V+W+AMISG ++G+G +A+ F M + V P TF V
Sbjct: 457 CGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSV 516
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV EG M D G P HY C+VDLLGRAG LD+A I M V+P
Sbjct: 517 LYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEP 576
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+W LLGAC IHK L + L EL Q G YVLL N+YS+ ++ + +R
Sbjct: 577 GPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRG 636
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ + L TPGC+ I + +H F D SHP+ IY ML+++ +++ AG+ E +
Sbjct: 637 VVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGT 696
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EEK + HSEKLAIAFG++ + PGT IR+ KNLR+C+DCHN K +S +
Sbjct: 697 ALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITE 756
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF++G CSC DYW
Sbjct: 757 RVIVVRDANRFHHFKDGICSCGDYW 781
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 187/439 (42%), Gaps = 53/439 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RA+S+++SP L+ +R K P P ++A +G L ++ G
Sbjct: 79 LIRAFSLNNSPSSAVSLYTHLR-KSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA-G 136
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + ++ Y F + A K+FD + +RDTV WN ++S ++N +A+ +F
Sbjct: 137 FGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFG 196
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + G D T VL A L L G I + G+ S + L +YSK
Sbjct: 197 DMVK--GGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSK 254
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F + + D+VS++AMISG N ++ F + +G + + G+
Sbjct: 255 CGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGL 314
Query: 241 -----------LSACSH------------------------CGLVDEGMMFLDRMSKDFG 265
L+ C H ++ + D S+
Sbjct: 315 IPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK-- 372
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGE 322
++ + ++ + GL ++A L M V+P+ ++L AC ++LG+
Sbjct: 373 ---SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Query: 323 RVIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLK 379
V LI ++ ES +V L+++Y+ G + + L M EK T S GL
Sbjct: 430 WV-HDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLH 488
Query: 380 GVVHEF--VVDDVSHPRIN 396
G HE + +++ H R++
Sbjct: 489 GYGHEALNLFNEMLHSRVS 507
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 4/204 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q HA+++ +G D +T L S + +A LF IP D +NVLI + N
Sbjct: 28 QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
A+ L+ +L R+ + +PD+ T V+ + LG G+GS + +
Sbjct: 88 SPSSAVSLYTHL-RKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA---GFGSDLFV 143
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++++A Y K + A +VF GM E+D V W+ M+SGL N +AI FG M + G+
Sbjct: 144 GSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGI 203
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM 254
D T VL + + GM
Sbjct: 204 GFDSTTVAAVLPGVAELQDLALGM 227
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 304/538 (56%), Gaps = 36/538 (6%)
Query: 2 VRAYSMSSSPEE---GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
+R +S + P LF +M + N F +F + C + G Q H V++
Sbjct: 61 IRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIK 120
Query: 59 DGYQLDSQLMTTLMDLYST----------FEKS---------------------FEACKL 87
+ +++D + +++ YS F++S EA L
Sbjct: 121 NSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSL 180
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F ++ +R+ ++WN++IS Y +N + ++AL LF + + +P+ + VL AC+ LG
Sbjct: 181 FSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQ--EPNSAILVSVLSACSQLG 238
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
AL+ G +H YI + L +LI MY+KCGS+ +A + F ++DV +++A IS
Sbjct: 239 ALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAIS 298
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
GLAMNG +A++ F M+ G+ PD ++ VL ACSH G V++G + MS GI
Sbjct: 299 GLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIR 358
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P + HY C+VDLLGRAGLL++A + + SM +KPD+ IW LLGACR++ + +G+RV
Sbjct: 359 PELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSL 418
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L+E G Y+LL N+Y+ E +++R+ M + + PGCS I + G VHEF
Sbjct: 419 LVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFS 478
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SH + EIY M +EI K++K GY E + + ++ EEK + +HSEKLA+AFG
Sbjct: 479 GDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVAFGF 538
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L T G+T+R+ KN+RIC DCH K++S V+ R++ IRDR FHHF EG CSC DYW
Sbjct: 539 LYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDYW 596
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + P+E LF +M+ N + C + +L G +H + +
Sbjct: 195 MISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKC 254
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++DS L L+D+Y+ A + F +RD A+ IS N + +AL LF+
Sbjct: 255 VRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFE 314
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G PD V+ + VL AC+H G +E G +S+ HG +++ ++ +
Sbjct: 315 QMKGE--GISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLG 372
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGHG 215
+ G L A + MP K D V W A++ + G+
Sbjct: 373 RAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNA 409
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 296/505 (58%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R Y S E + +M ++ I + F +K C + ++ G QIH V + G
Sbjct: 104 MIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLG 163
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +L+++Y + + +F+++ + +W+ + S + + L LF
Sbjct: 164 LEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFR 223
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE + K ++ + L ACA+ GAL G IH ++ + + + SL+ MY K
Sbjct: 224 EMCRE-TNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVK 282
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F+ M +++ +++SAMISG A++G G A+ F M + G+ PD + +
Sbjct: 283 CGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSL 342
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG M K+ + P HYGC+VDLLGRAGLL++A + I S+ ++
Sbjct: 343 LNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQ 402
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR+ L CR+H+++ LG+ + L++L + GDY+L+ N+YS W+ V R
Sbjct: 403 NDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRT 462
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ KGL+ TPG ST+ +KG H FV D SHP+ EIY+ML ++ QLK GY ++T
Sbjct: 463 EIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDLTQ 522
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L N+ EEK L HS+K+AIAF +L TPPG+ I++A+NLR+C DCH + K +S +Y
Sbjct: 523 ILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYE 582
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RDR RFH F+ G CSC DYW
Sbjct: 583 REIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
N E + C + CL +L+ C ++ EF + R+I + S +S++A + G
Sbjct: 21 NPEVNNCGGKEQECLYLLKRCNNID--EFKQVHARFIKLSLFCSSSFSASSVLAKCAHSG 78
Query: 183 ---SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
S+ A +F+G+ + + MI G A+ + M G+ PD+ T+
Sbjct: 79 WENSMNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPC 138
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L AC+ + EG + K G+ ++ ++++ GR G ++ + + + K
Sbjct: 139 LLKACTRLKAIREGKQIHGHVFK-LGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFK 197
Query: 300 PDSTIWRTLLGAC 312
++ W ++ AC
Sbjct: 198 SAAS-WSSMFSAC 209
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 294/490 (60%), Gaps = 7/490 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +MR+ + N F +++ SL QIHA+V++ Y+ S + T L+ YS
Sbjct: 395 LFSRMREDGVAPNDF--TYSTILTASVASLPP--QIHAQVIKTNYECTSIVGTALLASYS 450
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ EA +F I Q+D V+W+ +++CY + + A +F + G KP++ T
Sbjct: 451 KLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMH--GLKPNEFTI 508
Query: 137 LLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
V+ ACA A ++ G + H +H + + ++L++MY++ GS+ A +F+
Sbjct: 509 SSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQT 568
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D+VSW++M+SG A +G+ + A++ F M+ G+ D TF V+ C+H GLV+EG
Sbjct: 569 DRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQR 628
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ D M++D+GI P + HY C+VDL RAG LD+A LI M +WRTLLGAC++H
Sbjct: 629 YFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVH 688
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
K+V LG+ E L+ L+ +S YVLL N+YS+ G W++ E+R+ M+ K ++ GCS
Sbjct: 689 KNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSW 748
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +K VH F+ D SHP +IY L + +LK GY + + LH + E+K L+
Sbjct: 749 IQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLA 808
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSE+LA+AFG++ATPPG + + KNLR+C DCH K++S + +RE+++RD RFHHF
Sbjct: 809 MHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFN 868
Query: 496 EGRCSCNDYW 505
G CSC D+W
Sbjct: 869 SGVCSCGDFW 878
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
+K C + G Q+H +R G+ D + T+L+D+Y + + K+F+ +P+R+
Sbjct: 110 LKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRN 169
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V W L++ YI++ D + LF + E G P+ VT VL A G ++ G ++
Sbjct: 170 VVTWTSLLTGYIQDGALSDVMELFFRMRAE--GVWPNSVTFASVLSVVASQGMVDLGRRV 227
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + G S + +CNSL+ MY+KCG + A VF GM +D+VSW+ +++GL +NGH
Sbjct: 228 HAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHD 287
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
+A++ F + + T+ V+ C++ + L R + H YG
Sbjct: 288 LEALQLFHDSRSSITMLTQSTYATVIKLCANI-----KQLGLARQLHSSVLKRGFHSYGN 342
Query: 276 V----VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
V +D +AG L A + M + W ++ C + V L + + E
Sbjct: 343 VMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRE 401
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 17 LFEKMRQKRIPTNP--FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDL 74
LF +MR + + N FA ++ L G ++HA+ ++ G + +LM++
Sbjct: 192 LFFRMRAEGVWPNSVTFASVLSVVASQGMVDL--GRRVHAQSVKFGCCSTVFVCNSLMNM 249
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
Y+ EA +F + RD V+WN L++ + N +AL LF + S
Sbjct: 250 YAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHD--SRSSITMLTQS 307
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T V++ CA++ L ++H + + G+ S N+ +L+ YSK G LG A ++F M
Sbjct: 308 TYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLM 367
Query: 195 P-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
++VVSW+AMI+G NG A F M+ GV P+D T++ +L+A
Sbjct: 368 SGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A + FDEIP R+T+ + + R AL F +++R G + + VL+ C
Sbjct: 57 ARQAFDEIPHRNTLDHALFD--HARRGSVHQALDHFLDVHRCHGG-RVGGGALVGVLKVC 113
Query: 144 AHLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+ G+++H G+ + + SL+ MY K S+ +VF+ MP+++VV+W
Sbjct: 114 GSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+++++G +G D +E F M+ GV+P+ TF VLS + G+VD G + S
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR-VHAQSV 232
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
FG + ++++ + GL+++A + M + D W TL+ ++ H
Sbjct: 233 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR-DMVSWNTLMAGLVLNGH 286
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/501 (39%), Positives = 292/501 (58%), Gaps = 25/501 (4%)
Query: 30 PFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
P A +FA + C++ IH +++ G+ D + LMD+YS + + +
Sbjct: 635 PNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTI 694
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR-------------EESG---CKP 131
F + +RD V+WN +I+ I R DAL L + R E+ G KP
Sbjct: 695 FGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKP 754
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ VT + VL CA L AL G++IH Y + + + ++L+ MY+KCG L +A VF
Sbjct: 755 NSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVF 814
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESF------GAMQRAGVFPDDQTFTGVLSACS 245
MP ++V++W+ +I M+G G +A+E F G R + P++ T+ + +ACS
Sbjct: 815 DQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACS 874
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST-I 304
H G+VDEG+ M G+ P HY C+VDLLGR+G + +AY+LI +M +
Sbjct: 875 HSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA 934
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
W +LLGACRIH+ V GE +HL L+ + YVL+ N+YSS G W++ +R+ M E
Sbjct: 935 WSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKE 994
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHN 424
G++ PGCS I VH+F+ D SHP+ E+++ L+ ++++++ GYV +I+ LHN
Sbjct: 995 MGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHN 1054
Query: 425 LGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVI 484
+ EEK L HSE+LAIAFG+L TPPGTTIRVAKNLR+C DCH K++S + +RE+I
Sbjct: 1055 VDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREII 1114
Query: 485 IRDRLRFHHFREGRCSCNDYW 505
+RD RFHHF G CSC DYW
Sbjct: 1115 LRDVRRFHHFANGTCSCGDYW 1135
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 25/309 (8%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRD 95
+ C + L G +IH LR+G +++ + T L+D+Y ++ + +FD + +R
Sbjct: 541 LPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRT 600
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
WN L++ Y RN+ AL LF + E C P+ T VL AC E I
Sbjct: 601 VAVWNALLAGYARNEFDDQALRLFVEMISESEFC-PNATTFASVLPACVRCKVFSDKEGI 659
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H YI + G+G + N+L+ MYS+ G + ++ +F M ++D+VSW+ MI+G + G
Sbjct: 660 HGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRY 719
Query: 216 RDAIESFGAMQR----------------AGVF--PDDQTFTGVLSACSHCGLVDEGMMFL 257
DA+ MQR GV P+ T VL C+ + +G
Sbjct: 720 DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIH 779
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
K + ++ +VD+ + G L+ A ++ M ++ + W L+ A +H
Sbjct: 780 AYAVKQ-KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMHGK 837
Query: 318 VTLGERVIE 326
GE +E
Sbjct: 838 ---GEEALE 843
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 179/407 (43%), Gaps = 44/407 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+ + SSS + + M P + FA +K L G QIHA V + G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 61 YQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ S + +L+++Y A ++FD+IP RD V+WN +I+ R + +L L
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHL-GALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
F + E P T + V AC+H+ G + G+++H Y +G + N+L+ M
Sbjct: 421 FRLMLSEN--VDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTM 477
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y++ G + A +F KD+VSW+ +IS L+ N +A+ M GV PD T
Sbjct: 478 YARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTL 537
Query: 238 TGVLSACS-----------HCGLVDEGMMFLD--------------------RMSKDFGI 266
VL ACS HC + G + + R+ D +
Sbjct: 538 ASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVV 597
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK----PDSTIWRTLLGACRIHKHVTLGE 322
+ + ++ R DQA +L M + P++T + ++L AC K + E
Sbjct: 598 RRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKE 657
Query: 323 RVIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGL 367
+ ++++ + YV L+++YS +G E K + MN++ +
Sbjct: 658 GIHGYIVK-RGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDI 703
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 134/304 (44%), Gaps = 8/304 (2%)
Query: 12 EEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E +LF M + + PT+ S A C + G Q+HA LR+G L +
Sbjct: 415 ELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNA 473
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +Y+ + +A LF +D V+WN +IS +N R +AL + + G +
Sbjct: 474 LVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVD--GVR 531
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC-NSLIAMYSKCGSLGMAFE 189
PD VT VL AC+ L L G +IH Y +G + + +L+ MY C
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSHCG 248
VF G+ + V W+A+++G A N A+ F M F P+ TF VL AC C
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 651
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
+ + + K G + + ++D+ R G ++ + + M K D W T+
Sbjct: 652 VFSDKEGIHGYIVKR-GFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTM 709
Query: 309 LGAC 312
+ C
Sbjct: 710 ITGC 713
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+ +R W L+ + RDA+ + + + PD+ VL+A A + L
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPA--PPDNFAFPAVLKAAAAVHDLC 347
Query: 151 FGEKIHRYISEHGYG--SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
G++IH ++ + G+ S + + NSL+ MY KCG L A +VF +P++D VSW++MI+
Sbjct: 348 LGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIAT 407
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
L ++ F M V P T V ACSH
Sbjct: 408 LCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH 445
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 296/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y S E F LF +M +R+P + F + + C G +H ++ R
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 59 ------DGYQLDSQLMT---------------------------TLMDLYSTFEKSFEAC 85
+++ L+T T++ Y +A
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F+E+P ++ ++W V++S Y+ + DAL LF+ + E+ KP D T + AC
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAED--VKPCDYTYAGAISACGE 442
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LG+L+ G+++H ++ + G+ + N+LI MY++CG++ A +F MP D VSW+AM
Sbjct: 443 LGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAM 502
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS L +GHGR+A+E F M G++PD +F VL+AC+H GLVDEG + + M +DFG
Sbjct: 503 ISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFG 562
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P HY ++DLLGRAG + +A LI +M +P +IW +L CR + LG
Sbjct: 563 IIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAA 622
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L ++ Q G Y+LL N YS+ G W +R+ M ++G++ PGCS I VH F
Sbjct: 623 DQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVF 682
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
VV D HP +++Y+ L+ + +++ GYV + LH++ +K + L HSE+LA+ F
Sbjct: 683 VVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGF 742
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L PPG T+ V KNLRIC DCH +S RE+++RD RFHHF++G CSC +YW
Sbjct: 743 GLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 163/420 (38%), Gaps = 99/420 (23%)
Query: 44 CSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLI 103
C + + +VL + D+ TT++ Y A +F+E+ + V WN +I
Sbjct: 207 CEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMI 266
Query: 104 SCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
S Y+ + +A LF + E D+ T VL ACA+ G G+ +H I+
Sbjct: 267 SGYVHSGMVVEAFELFRRMVLER--VPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 164 YG----SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA--------------- 204
+ + + N+L+ +YSKCG++ +A +F M KDVVSW+
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384
Query: 205 ----------------MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC---- 244
M+SG G DA++ F M+ V P D T+ G +SAC
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELG 444
Query: 245 -------------------------------SHCGLVDEG-MMFLDRMSKDFGILPNIH- 271
+ CG V E +MFL ++PNI
Sbjct: 445 SLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFL--------VMPNIDS 496
Query: 272 -HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ ++ LG+ G +A +L M G+ PD + T+L AC V G + E
Sbjct: 497 VSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFES 556
Query: 328 LIELKAQESGD--YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP--------GCSTIG 377
+ G+ Y L++L G ++ E R+ + + TP GC T G
Sbjct: 557 MKRDFGIIPGEDHYTRLIDLLGRAG---RIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 43/282 (15%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
T+L+ Y+ + A FD +PQ RDTV N +IS Y R A+ +F +L
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGE--KIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
S +PDD + +L A HL + ++ + + G G +++ N+L+A+Y KC +L
Sbjct: 152 S-LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 185 GM---AFEVFKGMPEKDVVSWS-------------------------------AMISGLA 210
A +V MP+KD ++W+ AMISG
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LDRMSKDFGIL 267
+G +A E F M V D+ TFT VLSAC++ G G + R+ +F
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ +V L + G + A ++ +M K D W T+L
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSK-DVVSWNTIL 371
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 300/505 (59%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V YS EE LF MR+K + + + I + L G IH ++R G
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D + T LMD+Y + +A ++F E+ +D AW ++++ + + A+ F+
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ K D + + +L +C+H GAL+ G ++H + + + + + +++I MY+
Sbjct: 314 KMLGIQN-LKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYAN 372
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A F GM EKDVV W+AMI+G MNG+G DAI+ F M+ +G+ PD+ TF V
Sbjct: 373 CGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH G+V EG+ M K +PN+ HY CV+D+LGRAG LD AY I +M +P
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D ++ TLLGACRIH ++ LG + + + E++ ++G YVLL N+Y+ G+WE VK R
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ K L+ PG S+I + ++ F+ + HP+ +I +L + ++K AGYV
Sbjct: 553 SLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNV 612
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ + K + L +HSEK+AIAFG++ T PGT IR+ KNLR C DCH+ +K +S V+
Sbjct: 613 LLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFG 672
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++I+D RFH F++G CSC DYW
Sbjct: 673 RVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 154/303 (50%), Gaps = 15/303 (4%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHA+++ G ++ L +LM+ Y +A ++F P ++ V+W +LIS +N
Sbjct: 42 QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+A+ +F + KP+ VT VL A A+LG + + +H + G+ + +
Sbjct: 102 CFVEAIDVFREMTM--GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFV 159
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+L+ MYSK G +G+A ++F+ M E++VVSW+A++SG + +G +AI+ F M+R G+
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
D T ++ A G + G F+ R G + H ++D+ +D
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT----GYENDKHIKTALMDIYVSHNCVD 275
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES--GDYVLLLNL 345
A+++ + M VK D W +L +H +R I+H ++ ++ D ++L+ +
Sbjct: 276 DAHRVFSEMFVK-DVAAWTLMLTGFSSGRH---WDRAIKHFNKMLGIQNLKLDSIVLMGI 331
Query: 346 YSS 348
SS
Sbjct: 332 LSS 334
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 147/322 (45%), Gaps = 8/322 (2%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E +F +M N S + + +H +R G++ + + T L+
Sbjct: 105 EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+YS F A +LF+ + +R+ V+WN ++S Y + + +A+ LF+ + R+ G D
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRK--GLLVD 222
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T + ++ A +G L+ G IH +I GY + ++ +L+ +Y + A VF
Sbjct: 223 FYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS 282
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVD 251
M KDV +W+ M++G + H AI+ F M + D G+LS+CSH G +
Sbjct: 283 EMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQ 342
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G + ++ NI V+D+ G L+ A + MG K D W ++
Sbjct: 343 QGRR-VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK-DVVCWNAMIAG 400
Query: 312 CRIHKHVTLGERVIEHLIELKA 333
++ + G I+ +++K
Sbjct: 401 NGMNGY---GTDAIDLFLQMKG 419
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
++IH I G L NSL+ Y CG L A ++F P K+VVSW+ +ISGLA N
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-------G 265
+AI+ F M P+ T + VL A ++ GL+ R++K G
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLI--------RIAKSVHCFWVRGG 152
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
N+ +VD+ + G + A QL SM + + W ++ H
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSER-NVVSWNAIVSGYSDH 201
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/506 (40%), Positives = 300/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ E L+ M + + F A+K C L G ++H RVL
Sbjct: 134 LIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTH 193
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+D+Y+ +A +FD I RD+V WN +I+ Y +N R +AL L
Sbjct: 194 WGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCR 253
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ +G P T + + A A AL G ++H + G+ + L SL+ MY+K
Sbjct: 254 DM--AANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAK 311
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTG 239
G + +A +F+ + ++++VSW+AMI G M+GH +A++ F M+ A V PD+ TF G
Sbjct: 312 SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVG 371
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC+H G+V E F M + I P + H+ C+VD+LG AG ++AY LI M ++
Sbjct: 372 VLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQ 431
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PDS IW LL C+IHK+V LGE ++ LIEL+ +++G+YVLL N+Y+ G WEK +R
Sbjct: 432 PDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVR 491
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M +GL+ GCS I LKG H F+V D SHPR EIY+ L+ + + AGY+ +
Sbjct: 492 KLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTM 551
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
H++G +EK N + HSE+LAIAFG+++TP GT + V KNLR+C DCH K++S +
Sbjct: 552 PVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIV 611
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+IIRD R+HHF G CSC DYW
Sbjct: 612 QREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 175/389 (44%), Gaps = 23/389 (5%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P + + ++ C+ SL G Q+H R+L G D+ L T L+DLY+ A +
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD +P+R+ WNVLI Y R+ A+ L+ + + G +PD+ T L L+ACA L
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGM--VDYGVEPDNFTYPLALKACAAL 176
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
LE G ++H + +G M +C L+ MY+KCG + A VF + +D V W++MI
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMI 236
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+ NG +A+ M GV P T +SA + + G R FG
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRG-----RELHGFGW 291
Query: 267 LPNIHHYG----CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+VD+ ++G + A L + +K + W ++ +H H
Sbjct: 292 RRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHFDEAL 350
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
++ + ++AQ + D + + + S+ VKE +EF GL +K V
Sbjct: 351 KLFNKM-RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF---GLMV----DVYSIKPTV 402
Query: 383 HEF--VVDDVSHP-RINEIYQMLDEINKQ 408
F +VD + H R E Y ++ + Q
Sbjct: 403 QHFTCLVDVLGHAGRFEEAYDLIKGMPMQ 431
>gi|346703119|emb|CBX25218.1| hypothetical_protein [Oryza brachyantha]
Length = 596
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/438 (42%), Positives = 274/438 (62%), Gaps = 1/438 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR-NQRTRDALCLFDNLNREES 127
L+D+++ + ++FD I D AWN L+S Y+R DA+ +
Sbjct: 159 AVLLDVFTRCGRIASCRRVFDRIACPDLPAWNALLSAYMRCASSAADAILELFSRMISLG 218
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+P+++T + V+ AC LGAL G H Y+ + + +L+ MY+ CG L +A
Sbjct: 219 TVRPNEITLVAVIGACGELGALGHGVWAHTYLVKRQLAINRIVTTALVEMYAGCGRLDLA 278
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VF ++D ++AM+ GLA +GHGR A++ F M+ +GV D T VL +C+H
Sbjct: 279 EHVFATASDRDTRCYNAMLQGLAAHGHGRAALDLFDRMRGSGVPVDGVTILSVLCSCAHA 338
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
LVDEG+ + D+M +FGI P I HYGCVVD+L RAG LD A +LI M + P++ I+R+
Sbjct: 339 ELVDEGLEYFDKMEIEFGIEPRIEHYGCVVDMLSRAGRLDDAEKLIHEMPIVPNAAIYRS 398
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
L+ AC IH ++ LGER+I L + +SG++VL+ NLY+ + WE+ K+ R+ M G+
Sbjct: 399 LIRACDIHGNLELGERMITELRQHDPDDSGNHVLIANLYARMNRWEEAKKTRKEMKSMGI 458
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+PG S + + GV+HEF+V D +HP EIY M++EI +L G+ + TS L ++
Sbjct: 459 DKSPGSSLLDMNGVLHEFLVGDKTHPASKEIYTMVEEIEARLSEHGHRSSTTSVLFDVEE 518
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E+K + L+YHSE+LAI F ++A+ PGT IR+ KNLR+C DCH AK++S VY RE+++RD
Sbjct: 519 EDKADTLTYHSERLAIPFALIASDPGTPIRIIKNLRVCADCHESAKLVSRVYGREIVMRD 578
Query: 488 RLRFHHFREGRCSCNDYW 505
R RFHHFREG CSC D+W
Sbjct: 579 RTRFHHFREGECSCGDFW 596
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Query: 8 SSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
SS+ + LF +M + N I C + +L G+ H +++ ++
Sbjct: 201 SSAADAILELFSRMISLGTVRPNEITLVAVIGACGELGALGHGVWAHTYLVKRQLAINRI 260
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ T L+++Y+ + A +F RDT +N ++ + R AL LFD +
Sbjct: 261 VTTALVEMYAGCGRLDLAEHVFATASDRDTRCYNAMLQGLAAHGHGRAALDLFDRMR--G 318
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
SG D VT L VL +CAH ++ G E + E G ++ ++ M S+ G L
Sbjct: 319 SGVPVDGVTILSVLCSCAHAELVDEGLEYFDKMEIEFGIEPRIEHYGCVVDMLSRAGRLD 378
Query: 186 MAFEVFKGMP 195
A ++ MP
Sbjct: 379 DAEKLIHEMP 388
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 299/505 (59%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V YS EE LF MR+K + + + I + L G IH ++R G
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D + T LMD+Y + +A ++F E+ +D AW ++++ + + A+ F+
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ K D + + +L +C+H GAL+ G ++H + + + + + +++I MY+
Sbjct: 314 KMLGIQN-LKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYAN 372
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A F GM EKDVV W+AMI+G MNG+G DAI+ F M+ +G+ PD+ TF V
Sbjct: 373 CGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH G+V EG+ M K ++PN+ HY CV+D+LGRAG LD AY I +M +P
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQP 492
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D ++ TLLGACRIH ++ LG + + + E++ ++G YVLL N+Y+ G+WE VK R
Sbjct: 493 DFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ K ++ PG S+I + ++ F+ + HP+ +I +L + ++K AGYV
Sbjct: 553 SLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNV 612
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ + K + L +HSEK+AIAFG++ T P T IR+ KNLR C DCH +K +S V+
Sbjct: 613 LLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFG 672
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++I+D RFH F++G CSC DYW
Sbjct: 673 RVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 153/303 (50%), Gaps = 15/303 (4%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
QIHA+++ G ++ L +LM+ Y +A ++F P ++ V+W +LIS +N
Sbjct: 42 QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+A+ +F + KP+ VT VL A A+LG + + +H + G+ + +
Sbjct: 102 CFVEAIDVFREMIM--GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFV 159
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+L+ MYSK G +G+A ++F+ M E++VV+W+A++SG + +G +AI+ F M+R G+
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
D T ++ A G + G F+ R G + H ++D+ +D
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT----GYENDKHIKTALMDIYVSHNCVD 275
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES--GDYVLLLNL 345
A+++ + M VK D W +L +H +R I+H ++ ++ D + L+ +
Sbjct: 276 DAHRVFSEMSVK-DVAAWTLMLTGFSSGRH---WDRAIKHFNKMLGIQNLKLDSIALMGI 331
Query: 346 YSS 348
SS
Sbjct: 332 LSS 334
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 8/322 (2%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E +F +M N S + + +H +R G++ + + T L+
Sbjct: 105 EAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+YS F A +LF+ + +R+ V WN ++S Y + + +A+ LF+ + R+ G D
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRK--GLLVD 222
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T + ++ A +G L+ G IH +I GY + ++ +L+ +Y + A VF
Sbjct: 223 FYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS 282
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVD 251
M KDV +W+ M++G + H AI+ F M + D G+LS+CSH G +
Sbjct: 283 EMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQ 342
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G + ++ NI V+D+ G L+ A + MG K D W ++
Sbjct: 343 QGRR-VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK-DVVCWNAMIAG 400
Query: 312 CRIHKHVTLGERVIEHLIELKA 333
++ + G I+ +++K
Sbjct: 401 NGMNGY---GTDAIDLFLQMKG 419
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
++IH I G L NSL+ Y CG L A ++F P K+VVSW+ +ISGLA N
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF-------G 265
+AI+ F M P+ T + VL A ++ GL+ R++K G
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLI--------RIAKSVHCFWVRGG 152
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
N+ +VD+ + G + A QL SM + + W ++ H
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSER-NVVTWNAIVSGYSDH 201
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/519 (38%), Positives = 313/519 (60%), Gaps = 19/519 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM----RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARV 56
++++YS S+ ++ L K ++ + + F +K C SL G Q+HA V
Sbjct: 52 LIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHV 111
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDA 115
L+ G++LD+ + +L+ Y++ A K+FD + + R+ V+WNV+I Y +
Sbjct: 112 LKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIV 171
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L +F + + +PD T V++AC LG+L G +H ++ + K +C+ L+
Sbjct: 172 LIMFCEMMKVY---EPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKC--DKNVVCDVLV 226
Query: 176 A-----MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-G 229
MY KCGSL +A +VF+GM +DV SW+++I G A++G + A++ F M +
Sbjct: 227 NTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEK 286
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ P+ TF GVLSAC+H G+VDEG+M+ + M+K++ + P++ HYGC+VDL RAG + +A
Sbjct: 287 IVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEA 346
Query: 290 YQLITSMGVKPDSTIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYS 347
+++ M +KPD+ IWR+LL AC + H V L E + + + E G YVLL +Y+
Sbjct: 347 LNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYA 406
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
S W V LR+ MN+KG+ PGCS I + G HEF D +HP+ +IY+ ++EI +
Sbjct: 407 SASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQE 466
Query: 408 QLKIAGYVAEIT-SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICV 466
+L+ GY+ + + + L + E K N + HSE+LAIAFG+L + P IRV KNLR+C
Sbjct: 467 KLESVGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKNLRVCN 526
Query: 467 DCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH K++S +YN E+I+RDR+RFHHF++G CSC DYW
Sbjct: 527 DCHKVTKLISRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 287/457 (62%), Gaps = 3/457 (0%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
++HA+ ++ Y + T L+D Y EA K+F I ++D VAW+ +I Y +
Sbjct: 26 FEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQI 85
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKM 168
T A+ +F + +E+ KP++ T ++ ACA A +E G+++H + + + + +
Sbjct: 86 GDTEGAVRIFVQMAKEK--IKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNAL 143
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ ++L+ MYSK G + AFEVFK E+D+VSW+++ISG A +G+GR A+E F MQR
Sbjct: 144 CVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQ 203
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
+ D TF GV+SAC+H GL +EG + D M KD I P + HY C+VDL GRAG+L +
Sbjct: 204 NLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVK 263
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A ++I M + +WRTLL A IH+++ +G+ + LI L+ Q YVLL N+Y+S
Sbjct: 264 AMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYAS 323
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
VG+W++ ++R+ M EK ++ G S I +K + F+ DVSHP N+IY L+E++ Q
Sbjct: 324 VGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQ 383
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
LK AGY + + ++ E K LS HSE+LAIAFG++ TPPGT +++ KNLR+C DC
Sbjct: 384 LKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCGDC 443
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H+ K++S + R++++RD RFHHF+ G CSC DYW
Sbjct: 444 HSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCM-KFCSLMGGLQIHARVLRD 59
M+ Y+ E +F +M +++I N + S I C + G Q+HA ++
Sbjct: 78 MICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKS 137
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + + L+ +YS A ++F +RD V+WN +IS Y ++ R AL +F
Sbjct: 138 RFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVF 197
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR-YISEHGYGSKMNLCNSLIAMY 178
+ + R+ + D VT + V+ AC H G G++ + +H +M + ++ +Y
Sbjct: 198 EEMQRQ--NLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLY 255
Query: 179 SKCGSLGMAFEVFKGMP 195
+ G L A E+ MP
Sbjct: 256 GRAGMLVKAMEIINEMP 272
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 292/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y S + F LF +M +++P + F + + C + G +H +++R
Sbjct: 271 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 330
Query: 59 DGYQLDSQLMT--TLMDLYSTFEKSFEACKLFDEIPQRDTVAWN---------------- 100
+ ++ L L+ LYS K A ++FD + +D V+WN
Sbjct: 331 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 390
Query: 101 ---------------VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
V++S Y+ + DAL LF+ + E+ KP D T + AC
Sbjct: 391 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAED--VKPCDYTYAGAIAACGE 448
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G ++H ++ + G+ + + N+L+ MY+KCG++ A VF MP D VSW+AM
Sbjct: 449 LGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAM 508
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS L +GHGR+A+E F M G+ PD +F +L+AC+H GLVDEG + + M +DFG
Sbjct: 509 ISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG 568
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P HY ++DLLGR+G + +A LI +M +P +IW +L CR + + G
Sbjct: 569 ISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAA 628
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L + Q G Y+LL N YS+ G W +R+ M ++G++ PGCS I + +H F
Sbjct: 629 DQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVF 688
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+V D HP E+YQ L+ I +++ GYV + LH++ EK L HSEKLA+ F
Sbjct: 689 LVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGF 748
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+L PPG T+ V KNLRIC DCH +S RE+++RD RFHHF++G CSC +YW
Sbjct: 749 GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 163/439 (37%), Gaps = 117/439 (26%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLY---STFEKSFEACKLFDEIPQRDT----------- 96
Q+H VL+ G + L+ LY T E S++A K+ DE+P +D
Sbjct: 186 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 245
Query: 97 --------------------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
V WN +IS Y+++ DA LF + E+ D+ T
Sbjct: 246 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPL--DEFTF 303
Query: 137 LLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
VL ACA+ G G+ +H R + + + N+L+ +YSK G + +A +F
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 193 GMPEKDVVSWSA-------------------------------MISGLAMNGHGRDAIES 221
M KDVVSW+ M+SG G DA++
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK------------------- 262
F M+ V P D T+ G ++AC G + G + +
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 483
Query: 263 ---------DFGILPNIH--HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTL 308
F ++PN+ + ++ LG+ G +A +L M G+ PD + T+
Sbjct: 484 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGD--YVLLLNLYSSVGDWEKVKELREFMNEKG 366
L AC V G E + G+ Y L++L G ++ E R+ +
Sbjct: 544 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSG---RIGEARDLIKTMP 600
Query: 367 LQTTP--------GCSTIG 377
+ TP GC T G
Sbjct: 601 FEPTPSIWEAILSGCRTNG 619
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 43/306 (14%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVL 102
+L L A + R T+L+ ++ + +A FD +P +RDTV N +
Sbjct: 74 TLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAM 133
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE--KIHRYIS 160
+S + R A+ +F L S +PDD + ++ A + L ++H +
Sbjct: 134 MSAFARASLAAPAVSVFHALLGSGS-LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVL 192
Query: 161 EHGYGSKMNLCNSLIAMYSKCGSLGMAFE---VFKGMPEKDVVSWS-------------- 203
+ G + +++ N+LIA+Y KC + +++ V MP+KD ++W+
Sbjct: 193 KSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNA 252
Query: 204 -----------------AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
AMISG +G DA E F M V D+ TFT VLSAC++
Sbjct: 253 ARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN 312
Query: 247 CGLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
G G + R+ +F + +V L + G + A ++ +M +K D
Sbjct: 313 AGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVV 371
Query: 304 IWRTLL 309
W T+L
Sbjct: 372 SWNTIL 377
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 299/505 (59%), Gaps = 4/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + PEE LF +M+ + + + ++ + ++ C G QIH +++ G
Sbjct: 572 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 631
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D+Y+ A K+F++I ++ V WN +I + +N + +A+ LFD
Sbjct: 632 -NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFD 690
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + K D +T L V+QAC+HLG LE G+ +H + +G L +L MYSK
Sbjct: 691 QMYM--NCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSK 748
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L MA VF M E+ +VSWS MI+G M+G I F M +G+ P+D TF +
Sbjct: 749 CGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHI 808
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH G V+EG ++ + MS +FG+ P H+ C+VDLL RAG L+ AYQ+ITS+
Sbjct: 809 LSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPA 867
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+S+IW LL CRIHK + + + + ++L+++ ++G Y LL N+Y+ G W+K ++R
Sbjct: 868 NSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRS 927
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KGL+ PG STI + ++ F D SH + +IY+ L+ + Y +E +
Sbjct: 928 MMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDN 987
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ K N + HSEKLAIAFG++ T PGTT+R++KNLR+C DCH+FAK+ S +
Sbjct: 988 SIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITG 1047
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR G CSCNDYW
Sbjct: 1048 REIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 171/387 (44%), Gaps = 56/387 (14%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSL----MG----GLQIHARVLRDGYQLD 64
EG +F +M + + + + C + SL +G G +H V+R +
Sbjct: 474 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPE 533
Query: 65 SQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
+ LM+LY+ + K+F+ I ++ ++WN LIS + RN + +AL LF +
Sbjct: 534 LDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLF--VQ 591
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ G PD + L AC + + G +IH YI + G + + N+LI MY+KCG
Sbjct: 592 MQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGF 650
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ A ++F+ + EK +V+W++MI G + NG+ +AI F M V D TF V+ A
Sbjct: 651 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 710
Query: 244 CSHCGLVDEG-------MMF----------------------------LDRMSKDFGILP 268
CSH G +++G +M+ DRMS+
Sbjct: 711 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSER----- 765
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+I + ++ G G ++ L M G+KP+ + +L AC V G+
Sbjct: 766 SIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYF 825
Query: 326 EHLIELKAQESGD-YVLLLNLYSSVGD 351
+ E + D + +++L S GD
Sbjct: 826 NSMSEFGVEPKHDHFACMVDLLSRAGD 852
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 141/362 (38%), Gaps = 74/362 (20%)
Query: 17 LFEKMRQKR--IPTNP-------FACSFAIKCCM-----KFCSLMGGL-QIHARVLRDGY 61
L EK + R +P +P +AC F + K C+ L Q+HA + G
Sbjct: 317 LREKYNRPRHEVPGDPPGEASAEYACFFTLNSSRSLTSHKRCATSTTLTQLHAHLFITGL 376
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI-------------- 107
T L++ Y+ + ++FD P+ D+ W VLI CY+
Sbjct: 377 HRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHE 436
Query: 108 -------------------------------RNQRTRDALCLFDNLNREESGCKPDDVTC 136
+N + + L +F + E +PD VT
Sbjct: 437 MVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE--AVEPDSVTM 494
Query: 137 LLVLQACAHLGALEFGE--------KIHRYISEHGYGSKMN-LCNSLIAMYSKCGSLGMA 187
L V +AC+ LG+L G +H ++ +++ L +L+ +Y+ G+L
Sbjct: 495 LSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDC 554
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+VF+ + EK ++SW+ +IS NG +A+ F MQ G+ PD + LSAC
Sbjct: 555 HKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 614
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
G + K N ++D+ + G + A ++ + K T W +
Sbjct: 615 SFSQLGAQIHGYIIKTGNF--NDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVT-WNS 671
Query: 308 LL 309
++
Sbjct: 672 MI 673
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 298/473 (63%), Gaps = 5/473 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACK-LFDEIPQR 94
++C + + G+ HAR + DG D L+ Y+ + + F +P R
Sbjct: 113 VRCRLVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSR 172
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D+V+WN ++S + N +A+ +F + + C+PD VT + V+ A A+LGAL G
Sbjct: 173 DSVSWNTVLSWCVVNGEYDEAIAVFREMLASQE-CQPDRVTLVSVVSAIAYLGALAHGLW 231
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
H Y+ + L ++LI MYSKCG + A VF + ++ + +W+AM++G NG
Sbjct: 232 AHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANG 291
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
+ A+E F M+ + P+ TF VL+ACSH GLV+EGM + RMS+ +GI P+I HY
Sbjct: 292 YSERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHY 351
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
GC+VDL RAG+ ++A ++I +M ++PD+++ + LLGACR HK++ LG++V LIE A
Sbjct: 352 GCMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAA 411
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
+ YVLL N+Y+ G+W V ++R+ M ++G+ TPG S++ L GV+HEF+ D SH
Sbjct: 412 NDHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHS 471
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVLATPP 452
R +IY+ML EI +QLK +GY + + L ++ E+ K ++L+ HSEKLAIAFG+++T P
Sbjct: 472 RKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAP 531
Query: 453 GTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
GT IRV NLRIC DCHN K++S +Y R +I+RD RFHHFR+G CSC DYW
Sbjct: 532 GTPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRDANRFHHFRKGSCSCGDYW 584
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 296/490 (60%), Gaps = 7/490 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +MR+ R+ N F S +K + QIHA+V++ YQ + T L+ YS
Sbjct: 391 LFSRMREDRVMPNEFTYSAMLKASLSILPP----QIHAQVIKTNYQHIPFVGTALLASYS 446
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
F + +A +F I Q+D VAW+ ++SC+ + A LF+ + + G KP++ T
Sbjct: 447 KFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQ--GIKPNEFTI 504
Query: 137 LLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
V+ ACA A ++ G + H ++ Y + + ++L++MYS+ G++ A VF+
Sbjct: 505 SSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQT 564
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D+VSW++MISG A +G+ AIE+F M+ +G+ D TF V+ C+H GLV EG
Sbjct: 565 DRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ D M +D I P + HY C+VDL RAG LD+ LI M + +WRTLLGACR+H
Sbjct: 625 YFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVH 684
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
K+V LG+ + L+ L+ +S YVLL N+Y++ G W++ E+R+ M+ + ++ GCS
Sbjct: 685 KNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSW 744
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +K VH F+ D SHP ++IY+ L I +LK GY + LH++ ++K L
Sbjct: 745 IQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLV 804
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSE+LA+AFG++ATPPGT +++ KNLR+C DCH K++S + +RE+I+RD RFHHF
Sbjct: 805 AHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFN 864
Query: 496 EGRCSCNDYW 505
G CSC D+W
Sbjct: 865 GGACSCGDFW 874
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 3/232 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +MR + I NPF + + +L G ++HA+ ++ G + + +LM
Sbjct: 184 EVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLM 243
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ +A +F+ + RD V+WN L++ N+ +AL LF +R G K
Sbjct: 244 NMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE-SRATMG-KMT 301
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T V++ CA+L L ++H + +HG+ N+ +L YSKCG L A +F
Sbjct: 302 QSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFS 361
Query: 193 -GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
++VVSW+A+ISG NG A+ F M+ V P++ T++ +L A
Sbjct: 362 MTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL-DSQLMTTLMDLYS 76
F R+ + + S +K C + G Q+H ++ G+ + T+L+D+Y
Sbjct: 87 FSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYM 146
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
E ++F+ +P+++ V W L++ Q + + LF + E G P+ T
Sbjct: 147 KCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAE--GIWPNPFTF 204
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL A A GAL+ G+++H + G S + +CNSL+ MY+KCG + A VF M
Sbjct: 205 ASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMET 264
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
+D+VSW+ +++GL +N +A++ F + T+ V+ C++
Sbjct: 265 RDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCAN 314
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG---GLQIHARVL 57
M+ ++ + E YLF KM + I N F S I C C G G Q HA +
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA--CPSAGVDQGRQFHAISI 529
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+ Y + + L+ +YS A +F+ RD V+WN +IS Y ++ + A+
Sbjct: 530 KYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIE 589
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIA 176
F + E SG + D VT L V+ C H G + G++ + +H M ++
Sbjct: 590 TFRQM--EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVD 647
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
+YS+ G L + + MP + W ++ A H + F A + + P D
Sbjct: 648 LYSRAGKLDETMSLIRDMPFPAGAMVWRTLLG--ACRVHKNVELGKFSADKLLSLEPHDS 705
Query: 236 TFTGVLS 242
+ +LS
Sbjct: 706 STYVLLS 712
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 296/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P+E L M + R N F + +K S G QIHA ++
Sbjct: 136 LIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD 195
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ + A +FD++ ++ V+WN LI+ + R L +F
Sbjct: 196 WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 255
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T V A A +GALE G+ +H ++ + G + N+++ MY+K
Sbjct: 256 EMQR--NGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAK 313
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + +KDVV+W++M++ A G GR+A+ F M++ GV + TF +
Sbjct: 314 SGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSI 373
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M K++ + P I HY VVDLLGRAGLL+ A I M +KP
Sbjct: 374 LTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 432
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLG+CR+HK+ +G+ +H+ EL ++G VLL N+Y+S G W+ +R+
Sbjct: 433 TAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRK 492
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV +D +HPR EIY+ +EI+ Q++ AGYV
Sbjct: 493 MMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDY 552
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G TIR+ KN+RIC DCH+ + +S V+
Sbjct: 553 VLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFK 612
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 613 REIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 7/296 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
I C ++ SL IHA + + L +L+ LY +A ++FD +P RD
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+W LI+ Y +N +AL L + R KP+ T +L+A + GE+IH
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGR--FKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
++ + + + ++L+ MY++CG + MA VF + K+ VSW+A+I+G A G G
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ F MQR G T++ V SA + G +++G M K G + +
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKS-GERLSAFVGNTI 307
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+D+ ++G + A ++ + K D W ++L A LG + H E++
Sbjct: 308 LDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTA---FAQYGLGREAVTHFEEMR 359
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
RD L D+++ E P L+ ACA +L+ IH +++ + + L N
Sbjct: 49 RDTL---DSVDARELAATPRLYHSLIT--ACARYRSLDDARAIHAHLAGSQFAGSVFLDN 103
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
SLI +Y KCG++ A VF GMP +D+ SW+++I+G A N +A+ M R P
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF +L A G + ++ + +++ ++D+ R G +D A +
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQ-IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
Query: 293 ITSMGVKPDSTIWRTLLG 310
+ K + W L+
Sbjct: 223 FDQLESK-NGVSWNALIA 239
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/457 (40%), Positives = 285/457 (62%), Gaps = 4/457 (0%)
Query: 52 IHARVLRDGYQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+H V+R G+ +D + ++D+Y+ A ++FD +P +D+V+WN LI+ Y++N
Sbjct: 292 LHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNG 351
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+A+ + ++ + E G K T + VL A +HLGAL+ G ++H + G + +
Sbjct: 352 LANEAVERYGHMQKHE-GLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYV 410
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
LI +Y+KCG L A +F+ MP + W+A+ISGL ++GHG +A+ F MQ+ G+
Sbjct: 411 GTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGI 470
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD TF +L+ACSH GLVD+G F D M + I+P HY C+ D+LGRAG LD+A+
Sbjct: 471 KPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAF 530
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
I +M +KPDS +W LLGACRIH +V +G+ ++L EL + G YVL+ N+Y+ VG
Sbjct: 531 NFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVG 590
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS--HPRINEIYQMLDEINKQ 408
W+ V E+R + + LQ TPG S+I +K V+ F + + HP+ EI L + +
Sbjct: 591 KWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAK 650
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
++ GYV++ + L ++ +EK + L+ HSE+LAIAFG++ TP T + + KNLR+C DC
Sbjct: 651 IRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDC 710
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
HN K +S + RE+I+RD RFHHF++G CSC D+W
Sbjct: 711 HNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 171/386 (44%), Gaps = 35/386 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A+S ++ P F L + P P +F S Q+HA LR G
Sbjct: 39 LIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFP-SLIRAAPSNASAAQLHACALRLG 97
Query: 61 YQLDSQLMT-TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
S + +L+ Y F + EA K+FDE+ +RD AWN ++S RN R +A+ LF
Sbjct: 98 LVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLF 157
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G D VT VL C LG +H Y +HG ++ +CN+LI +Y
Sbjct: 158 GRMVGE--GVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYG 215
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G L A VF GM +D+V+W+++ISG G A++ F M+ +GV PD T
Sbjct: 216 KLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVS 275
Query: 240 VLSACS-----------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
+ SA + HC ++ G D ++ + +VD+ + ++
Sbjct: 276 LASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGN-----------AIVDMYAKLSNIEA 324
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-----SGDYVLLL 343
A ++ SM V+ DS W TL+ + L +E ++ E G +V +L
Sbjct: 325 AQRMFDSMPVQ-DSVSWNTLITG---YMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVL 380
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQT 369
YS +G ++ + + GL
Sbjct: 381 PAYSHLGALQQGMRMHALSIKIGLNV 406
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L G+++HA ++ G +D + T L+DLY+ K EA LF+++P+R T WN +IS
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
+ +AL LF + +E G KPD VT + +L AC+H G ++ G + + Y
Sbjct: 448 GLGVHGHGAEALTLFSRMQQE--GIKPDHVTFVSLLAACSHAGLVDQGRSFFD-VMQVTY 504
Query: 165 G----SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGH 214
+K C + M + G L AF + MP K D W A++ ++G+
Sbjct: 505 DIVPIAKHYAC--MADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGN 557
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 288/497 (57%), Gaps = 4/497 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P LF M + + + F K C + +L G Q+ +++ G+Q D +
Sbjct: 119 PAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEHSQNS 178
Query: 71 LMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+ Y ++ A + F+++ ++ T +W+ L++ Y R R + + F + R +G
Sbjct: 179 LISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAGRWAECVESFGAMVR--AG 236
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD+ + + L ACAHLGA + G IH + + + SL+ MY+KCG + A
Sbjct: 237 WRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMSTSLVDMYAKCGCIENAA 296
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF M +K+ ++SAM+SGLA++G GR A+E F AM R G PD + GVL+ACS G
Sbjct: 297 AVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYVGVLNACSRAG 356
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
L++EG+ DRM + + PN HYGC+VDL+ RAG LD A LI +M P T WR+L
Sbjct: 357 LLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGNMPTGPTDTAWRSL 416
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACRIH ++ L ER ++ L L A +GDY++L ++++ + + R ++GL
Sbjct: 417 LNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARAHNRDAAAARRTEAVDRGLA 476
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
PG S + + G H FV D SHPR ++IY+ML ++ QL+ GY + + + G E
Sbjct: 477 QAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRFEGYTPDTSELALDAGEE 536
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK ++ HS+KLA+AFG+L+TP G +RV NLR+ +CH ++ ++S ++ RE+++RDR
Sbjct: 537 EKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGREIVVRDR 596
Query: 489 LRFHHFREGRCSCNDYW 505
RFH F+ G CSC +YW
Sbjct: 597 NRFHRFKRGACSCGNYW 613
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/506 (40%), Positives = 303/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ S +E LF +MRQ + N F + ++ C L G QIH+ VL+
Sbjct: 277 MISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV 336
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + LMD+Y+ + + KLF +++ VAWN +I Y++ AL LF
Sbjct: 337 GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLF 396
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
N+ + +P +VT VL+A A L ALE G +IH + Y + NSLI MY+
Sbjct: 397 SNMLGLD--IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYA 454
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A F M ++D VSW+A+I G +++G G +A+ F MQ++ P+ TF G
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVG 514
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACS+ GL+D+G M +D+GI P I HY C+V LLGR+G D+A +LI + +
Sbjct: 515 VLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQ 574
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +WR LLGAC IHK++ LG+ + ++E++ Q+ +VLL N+Y++ W+ V +R
Sbjct: 575 PSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVR 634
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M +K ++ PG S + +GVVH F V D SHP I I+ ML+ + K+ + AGYV + +
Sbjct: 635 KNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCS 694
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ +EK L HSE+LA+AFG++ P G +IR+ KNLRICVDCH K++S +
Sbjct: 695 VVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIV 754
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE++IRD RFHHFR+G CSC DYW
Sbjct: 755 QREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G +H +L+ G LD L++ Y F +A KLFDE+P +TV++ L +
Sbjct: 21 AGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFS 80
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
R+ + + A L L RE G + + +L+ + + +H Y+ + G+ +
Sbjct: 81 RSHQFQRARRLLLRLFRE--GYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQAD 138
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ +LI YS CG++ A +VF G+ KD+VSW+ M++ A N D++ F M+
Sbjct: 139 AFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRI 198
Query: 228 AGVFPDDQTFTGVLSACS 245
G P++ T + L +C+
Sbjct: 199 MGYRPNNFTISAALKSCN 216
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/448 (43%), Positives = 277/448 (61%), Gaps = 8/448 (1%)
Query: 63 LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
L+ ++ L+D+Y A +LFDE R+ V +N ++S Y R R+AL + D +
Sbjct: 224 LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM 283
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEK-----IHRYISEHGYGSKMNLCNSLIAM 177
++ G +PD VT L + A A L L +G+ +H YI ++G M L +L+ M
Sbjct: 284 LQQ--GPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDM 341
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+++CG A +VF M E+DV +W+A I +AM G+G A F M GV PD F
Sbjct: 342 FARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLF 401
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VL+ACSH G V++G+ M +D GI P I HYGC+VDLLGRAGLL +A+ LI SM
Sbjct: 402 VQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP 460
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++P+ +W +LL ACR+HK+V + E + EL Q +G +VLL N+Y+S G W V
Sbjct: 461 MEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVAR 520
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R + EKG++ PG S++ + GV+HEF D SHP + I ML E+N + AG++ +
Sbjct: 521 VRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPD 580
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+++ L ++ +EK LS HSEKLAIAFG++AT IRV KNLR+C DCH+FAK+ S
Sbjct: 581 LSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASI 640
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+YNRE+I+RD RFH FR+G CSC DYW
Sbjct: 641 IYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 50/315 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R YS + E L+ +M + N + F + C K + G+Q+H V++ G
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ Y+ K+F+ + +R+ V+W LI Y R R ++A+ LF
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF- 220
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
E K+ + N+L+ MY K
Sbjct: 221 ----------------------------FEMLNKV--------------MVNALVDMYMK 238
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A +F ++++V ++ ++S A G R+A+ M + G PD T
Sbjct: 239 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 298
Query: 241 LSACSHC-----GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+SA + G V G + K+ GI ++ +VD+ R G A Q+
Sbjct: 299 ISASAQLVDLFYGKVCHGYWVHTYIEKN-GIPCDMRLNTALVDMFARCGDPQSAMQVFNK 357
Query: 296 MGVKPDSTIWRTLLG 310
M + D + W +G
Sbjct: 358 M-TERDVSAWTAAIG 371
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 187 AFEVFKGMPEKD--VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
AFE+FK D + +++I G + G GR+AI + M GV P+ TF VLS C
Sbjct: 82 AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
+ EG+ + K G+ ++ C++ G +D +++ M + +
Sbjct: 142 TKIAAFCEGIQVHGSVVK-MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER-NVVS 199
Query: 305 WRTLL 309
W +L+
Sbjct: 200 WTSLI 204
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/494 (41%), Positives = 291/494 (58%), Gaps = 4/494 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD-GYQLDSQLMTTL 71
E LF + + + + F ++ C + L G I R +R+ G + + T+L
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWID-RCMRECGLSRNVFVATSL 246
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ EA +FD + ++D V W+ +I Y N R+A+ LF + + +P
Sbjct: 247 VDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRK--VNVRP 304
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D + L +CA LGALE G ++ + S L SLI Y+KCGS+ A V+
Sbjct: 305 DCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVY 364
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
K M EKD V ++A+ISGLAM G A FG M + G+ P++ TF G+L C+H GLVD
Sbjct: 365 KMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVD 424
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G + + MS DF + P I HYGC+VDLL RAG LD+A+ LI M +K + +W +LLG
Sbjct: 425 DGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG 484
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H+ L E V++ LIEL+ SG YVLL N+YS+ W++ +++R +NEKG+Q P
Sbjct: 485 CRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLP 544
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + + GVVHEF+V D SHP +IY+ L+ + K LK AGY L ++ EEK
Sbjct: 545 GYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKE 604
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ L HSEKLA+AF +++T IRV KNLR+C DCH K +S V RE++IRD RF
Sbjct: 605 HFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRF 664
Query: 492 HHFREGRCSCNDYW 505
H F +G CSC DYW
Sbjct: 665 HCFSDGACSCRDYW 678
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 4/318 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R +L+ M + I + F SF +K C + G+ IH+ V + G
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T ++ YS +A K+FD++ ++ V+W +I I + R+A+ LF
Sbjct: 135 FDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFR 194
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L ESG +PD + VL+ACA LG LE G I R + E G + + SL+ MY+K
Sbjct: 195 GL--LESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTK 252
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF GM EKD+V WSAMI G A NG R+AIE F M++ V PD G
Sbjct: 253 CGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGA 312
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS+C+ G ++ G M+ + L N ++D + G +++A + M K
Sbjct: 313 LSSCASLGALELGNWAKGLMNYE-EFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEK- 370
Query: 301 DSTIWRTLLGACRIHKHV 318
D ++ ++ ++ V
Sbjct: 371 DRVVFNAVISGLAMYGQV 388
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 156/330 (47%), Gaps = 19/330 (5%)
Query: 53 HARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL-FDEIP-QRDTVAWNVLISCYIRNQ 110
H R+LR D+ L++ ++ F + + L F + P +T +N +I +
Sbjct: 24 HCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKD 83
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R +A+ L+ ++++ + PD T VL+ACA L G IH + + G+ + +
Sbjct: 84 RFNNAVHLYASMHK--AAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFV 141
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+++ YSKCG L A++VF M K+VVSW+ MI G G R+A++ F + +G+
Sbjct: 142 KTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGL 201
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD VL AC+ G ++ G ++DR ++ G+ N+ +VD+ + G +++A
Sbjct: 202 RPDGFVIVRVLRACARLGDLESG-RWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEAR 260
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLYSS- 348
+ M V+ D W ++ + L IE E+ K D ++ SS
Sbjct: 261 FVFDGM-VEKDIVCWSAMIQG---YASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSC 316
Query: 349 -------VGDWEK-VKELREFMNEKGLQTT 370
+G+W K + EF++ L T+
Sbjct: 317 ASLGALELGNWAKGLMNYEEFLSNPVLGTS 346
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/507 (39%), Positives = 300/507 (59%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + E +F +M + N F + + C++ L G QIH +++
Sbjct: 123 MISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWN 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + ++L+D+Y+ + EA ++F+ +P+RD V+ +I+ Y + +AL +F
Sbjct: 183 YDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQ 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G +P+ VT +L A + L L+ G++ H ++ L NSLI MYSK
Sbjct: 243 RLQSE--GMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTG 239
CG+L A +F MPE+ +SW+AM+ G + +G GR+ +E F M+ V PD T
Sbjct: 301 CGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 360
Query: 240 VLSACSHCGLVDEGMMFLDRM-SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH + D G+ D M + ++GI P+ HYGC+VD+LGRAG +D+A++ I M
Sbjct: 361 VLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 420
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KP + + +LLGACR+H V +GE V LIE++ + +G+YV+L NLY+S G WE V +
Sbjct: 421 KPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNV 480
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M +K + PG S I + +H F +D +HPR E+ + EI+ ++K AGYV +I
Sbjct: 481 RAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDI 540
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+ FG++ T G IRV KNLRICVDCHNFAK+ S V
Sbjct: 541 SCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKV 600
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+ REV +RD+ RFH +G CSC DYW
Sbjct: 601 FEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 167/330 (50%), Gaps = 22/330 (6%)
Query: 27 PTNPFACSFAI-KCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
P F C A+ C+ +L G ++HA +++ Y + L T L+ Y + +A
Sbjct: 47 PEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDAR 106
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
K+ DE+P+++ V+W +IS Y + + +AL +F + R + KP++ T VL +C
Sbjct: 107 KVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDG--KPNEFTFATVLTSCIR 164
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L G++IH I + Y S + + +SL+ MY+K G + A E+F+ +PE+DVVS +A+
Sbjct: 165 ASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAI 224
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM----FLDRMS 261
I+G A G +A+E F +Q G+ P+ T+ +L+A S L+D G L R
Sbjct: 225 IAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 284
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVT 319
+ +L N ++D+ + G L A +L +M P+ T W +L H
Sbjct: 285 PFYAVLQN-----SLIDMYSKCGNLSYAQRLFDNM---PERTAISWNAMLVGYSKH---G 333
Query: 320 LGERVIE--HLIELKAQESGDYVLLLNLYS 347
LG V+E L+ + + D V LL + S
Sbjct: 334 LGREVLELFRLMRDEKRVKPDAVTLLAVLS 363
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L AC AL G+++H ++ + Y L L+ Y KC L A +V MPEK+
Sbjct: 57 LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC----------G 248
VVSW+AMIS + GH +A+ F M R+ P++ TF VL++C G
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHG 176
Query: 249 LVDE---------GMMFLDRMSKD---------FGILPNIHHYGCVVDLLGRA--GLLDQ 288
L+ + G LD +K F LP C + G A GL ++
Sbjct: 177 LIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 236
Query: 289 A---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN- 344
A +Q + S G++P+ + +LL A + G++ H++ +E Y +L N
Sbjct: 237 ALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLR---RELPFYAVLQNS 293
Query: 345 ---LYSSVGDWEKVKELREFMNEK 365
+YS G+ + L + M E+
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPER 317
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/495 (38%), Positives = 295/495 (59%), Gaps = 2/495 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P E + ++M + I + A C L GLQ+H R+ R G + DS + +
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
++D+Y A K+F+ + ++ V+W +++ Y +N +AL F + E G
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEM--EVDGLL 328
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P++ T ++L +CA + AL G+ +H I + G+ + + N+LI MYSK GS+ A +V
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M +D ++WSAMI GL+ +G GR+A+ F M A P TF GVLSAC+H G V
Sbjct: 389 FLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSV 448
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
EG +L+++ K GI P + HY C+V LL +AG LD+A + S VK D WRTLL
Sbjct: 449 QEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLS 508
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC +H++ LG++V E ++++ + G Y+LL N+Y+ W+ V ++R+ M E+ ++
Sbjct: 509 ACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKE 568
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
PG S I ++ +H FV + +HP N+IY+ + E+ ++ GYV +I + H++ E+K
Sbjct: 569 PGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQK 628
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+SYHSEKLAIA+G++ TP G IRV KNLR+CVDCH+ K++S V NR +I+RD R
Sbjct: 629 REYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANR 688
Query: 491 FHHFREGRCSCNDYW 505
FH F +G CSC DYW
Sbjct: 689 FHCFGDGGCSCADYW 703
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 165/348 (47%), Gaps = 12/348 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N + + I C ++ G Q H L+ G + L+ +YS A ++
Sbjct: 128 NEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVW 187
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
E+P D ++N++I+ + N +AL + D + E D+VT + C+HL
Sbjct: 188 YEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDE--CIVWDNVTYVTAFGLCSHLKD 245
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L G ++H + G + +++I MY KCG++ A +VF + K+VVSW+A+++
Sbjct: 246 LRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAA 305
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
+ NG +A+ F M+ G+ P++ TF +L++C+ + G + R+ K G
Sbjct: 306 YSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKS-GFED 364
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+I ++++ ++G ++ A+++ M + DS W ++ C + H E ++
Sbjct: 365 HIIVGNALINMYSKSGSIEAAHKVFLEM-ICRDSITWSAMI--CGLSHHGLGREALVVFQ 421
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKE----LREFMNEKGLQTTPG 372
L A+E YV + + S+ V+E L + M + G++ PG
Sbjct: 422 EMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIE--PG 467
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 5/269 (1%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVL 102
+L G IHA ++ ++ +L++LY+ ++ A LFD + +R+ V+W L
Sbjct: 40 NLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGAL 99
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
++ Y N + L LF + + +P++ ++ +C+ G + G + H Y +
Sbjct: 100 MAGYFHNGLVLEVLRLFKTMISVDY-MRPNEYIFATIISSCSDSGQVVEGWQCHGYALKS 158
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G + N+LI MYS+ + A V+ +P DV S++ +I+GL NG+ +A+E
Sbjct: 159 GLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVL 218
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M + D+ T+ CSH + G+ RM + G + ++D+ G+
Sbjct: 219 DRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRT-GAEYDSFVSSAIIDMYGK 277
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + A ++ + K + W +L A
Sbjct: 278 CGNILNARKVFNRLQTK-NVVSWTAILAA 305
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS + EE F +M + N + + + C +L G +H R+ + G
Sbjct: 302 ILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSG 361
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+++YS A K+F E+ RD++ W+ +I + R+AL +F
Sbjct: 362 FEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQ 421
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + C P VT + VL ACAHLG+++ G +++ + + G + ++ +
Sbjct: 422 EMLAAKE-C-PHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLC 479
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
K G L A K P K DVV+W ++S
Sbjct: 480 KAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 293/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S+ E+ F LF ++ + + N ++ S ++ C L G QIH ++ G
Sbjct: 316 MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIG 375
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D + LMD Y+ + K+F + + V+WN ++ + ++ +AL +F
Sbjct: 376 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFC 435
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + C VT VL+ACA ++ +IH I + + + + NSLI Y+K
Sbjct: 436 EMQAAQMPCT--QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAK 493
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +VF+ + E+D++SW+A+ISG A++G DA+E F M ++ V +D TF +
Sbjct: 494 CGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVAL 553
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS C GLV+ G+ D M D GI P++ HY C+V LLGRAG L+ A Q I + P
Sbjct: 554 LSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAP 613
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +WR LL +C IHK+V LG E ++E++ Q+ YVLL N+Y++ G ++V LR+
Sbjct: 614 SAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRK 673
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ PG S + +KG +H F V V HP + I ML+ +N + GY+ +I
Sbjct: 674 SMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINV 733
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSE+LA+A+G++ TPPG IR+ KNLR C+DCH V+S +
Sbjct: 734 VLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVK 793
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +G+CSC DYW
Sbjct: 794 REIIVRDINRFHHFEDGKCSCGDYW 818
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 148/337 (43%), Gaps = 30/337 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIK--CCMKFCSLMGGLQIHARVLR 58
+V+A++ E LF ++R + N F + +K M L GG +H+ +
Sbjct: 133 LVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWK 190
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ ++ + + L+D YS +A +F+ I ++D V W ++SCY N +A
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAF-- 248
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
C +C L+ +CA G IH + ++ ++ +L+ MY
Sbjct: 249 ---------RCAQ---SCSLLAISCARQG-------IHGCAIKTLNDTEPHVGGALLDMY 289
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG + A F+ +P DV+ S MIS A + A E F + R+ V P++ + +
Sbjct: 290 AKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLS 349
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL AC++ +D G + K G ++ ++D + +D + ++ +S+
Sbjct: 350 SVLQACTNMVQLDFGKQIHNHAIK-IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR- 407
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+ W T++ LGE + E++A +
Sbjct: 408 DANEVSWNTIVVG---FSQSGLGEEALSVFCEMQAAQ 441
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 150/356 (42%), Gaps = 35/356 (9%)
Query: 26 IPTNP----FACSFAIKCCMKFCSLMGGLQIHARVLRDGY--QLDSQLMTTLMDLYSTFE 79
+P+ P FAC+ ++ C+ GG +H V+R G +LD L+++Y
Sbjct: 51 LPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLG 110
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A +LFD +P+R+ V++ L+ + + A LF L E +T +L
Sbjct: 111 PLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLK 170
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L L G +H + G+ + + LI YS C + A VF G+ KD
Sbjct: 171 LAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDA 228
Query: 200 VSWSAMISGLAMNGHGRDAIE-----SFGAMQ--RAGV-------FPDDQTFTG--VLSA 243
V W+AM+S + N +A S A+ R G+ D + G +L
Sbjct: 229 VVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDM 288
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKP 300
+ CG + + + + + D IL + ++ ++ +QA++L + V P
Sbjct: 289 YAKCGDIKDARLAFEMIPYDDVILLSF-----MISRYAQSNQNEQAFELFLRLMRSSVLP 343
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGDWEK 354
+ ++L AC + G+++ H I++ ES +V L++ Y+ D +
Sbjct: 344 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKI-GHESDLFVGNALMDFYAKCNDMDS 398
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 290/506 (57%), Gaps = 24/506 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + L ++M ++ + + A + + C + SL G +H + +
Sbjct: 323 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LMD+Y+ A +F + +D ++WN ++
Sbjct: 383 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------- 426
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
KPD T +L ACA L ALE G++IH YI +GY S ++ N+L+ +Y K
Sbjct: 427 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG LG+A +F +P KD+VSW+ MI+G M+G+G +AI +F M+ AG+ PD+ +F +
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+++G F M DF I P + HY C+VDLL R G L +AY+ I ++ + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 599
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+TIW LL CRI+ + L E+V E + EL+ + +G YVLL N+Y+ E+VK +RE
Sbjct: 600 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMRE 659
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVV-DDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ +KGL+ PGCS I +KG V+ FV ++ SHP +I +L ++ +++K GY +
Sbjct: 660 KIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 719
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L N +K AL HSEKLA+AFG+L PP TIRV KNLR+C DCH AK +S
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC +W
Sbjct: 780 RREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 4/227 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD++ RD ++WN +IS Y+ N T L ++ + G D T + VL C
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY--LGIDVDLATIISVLVGC 261
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A+ G L G+ +H + + ++N N+L+ MYSKCG L A VF+ M E++VVSW+
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MI+G +G AI M++ GV D T +L AC+ G +D G D + +
Sbjct: 322 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ N+ ++D+ + G ++ A + ++M VK D W T++G
Sbjct: 382 -NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVG 426
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 18/230 (7%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VLQ CA L +L G+K+H I + G L L++ Y+ CG L VF M +K+
Sbjct: 105 VLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+ M+S A G +++I F M G+ + D
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRP---------------ESASELFD 209
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ I N G V + L GL Y+ + +G+ D ++L C +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGL--GIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 319 TLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDWEKVKELREFMNEKGL 367
+LG+ V I+ + ++ LL++YS GD + + E M E+ +
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/520 (38%), Positives = 296/520 (56%), Gaps = 34/520 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + P + Y F M + + A A+ C K +L G +H V +
Sbjct: 206 LIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKR 265
Query: 61 YQLDSQLMTTLMDLYST------FEKSFEA-----------------CKL---------F 88
Q+ +L+ TL+D+Y+ + F+A CKL F
Sbjct: 266 IQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLF 325
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++ RD + +N +I+ YI + R RDAL LF L R G + D+ T + +L ACA LGA
Sbjct: 326 DQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRH--GMRADNFTVVSLLTACASLGA 383
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L G +H I + + L +L+ MY KCG + A VF M E+DV +WSAMI+G
Sbjct: 384 LPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAG 443
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G DA+ESF M+R G P T+ VL+ACSH L++EG + M + P
Sbjct: 444 LAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHP 503
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
I HYGC++DLL R+GLLD+A L+ +M ++P++ IW ++L ACR+HK++ L EHL
Sbjct: 504 QIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHL 563
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L +E YV L N+Y W + K +R M E+G++ T G S+I + G VH+FVV+
Sbjct: 564 LKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVN 623
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
D SHP EI M++EI ++LK AGY + ++ EEK AL HSEK+AIAFG++
Sbjct: 624 DQSHPWTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLI 683
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
+ PP I + KNLR+C DCH+ K++S ++NRE+I+RDR
Sbjct: 684 SLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRDR 723
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 36/260 (13%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +L + P+R+ V+W LI+ Y R R DA+ F+ + + G +PD+V + L A
Sbjct: 187 EARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSD--GVEPDEVAVIGALSA 244
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-----PE- 196
C+ L LEFG +H + + L +LI MY+KCG + A VF + PE
Sbjct: 245 CSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEP 304
Query: 197 --------------------------KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+DV+++++MI+G +G RDA++ F ++R G+
Sbjct: 305 WNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGM 364
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D+ T +L+AC+ G + +G + + + +++ +VD+ + G +D+A
Sbjct: 365 RADNFTVVSLLTACASLGALPQGRALHASIEQRI-VEEDVYLVTALVDMYMKCGRVDEAT 423
Query: 291 QLITSMGVKPDSTIWRTLLG 310
+ MG + D W ++
Sbjct: 424 AVFHRMGER-DVHTWSAMIA 442
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
++I + G L A + PE++VVSW+++I+G + G DA+ F M GV P
Sbjct: 174 TVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEP 233
Query: 233 DDQTFTGVLSACSHCGLVDEG-MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
D+ G LSACS ++ G ++ L K + + ++D+ + G + QA
Sbjct: 234 DEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKL--VVTLIDMYAKCGDIAQAQA 291
Query: 292 LITSMGVKPDSTIWRTLL-GACRIHKHVTLGERVIEHL 328
+ ++G W ++ G C++ HV + + + +
Sbjct: 292 VFDAVGRGQKPEPWNVIIDGYCKL-GHVDIARSLFDQM 328
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/511 (39%), Positives = 304/511 (59%), Gaps = 20/511 (3%)
Query: 1 MVRAYSMSSS-PEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++RA + S+ + L+ +M Q + + F +K C +L G QIHA++L+
Sbjct: 97 LIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILK 156
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + +L+ Y+T ++ A +FD + +R V+WNV+I ++R AL L
Sbjct: 157 LGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNL 216
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + +PD T + ACA +G+L G + + L SL+ MY
Sbjct: 217 FGEMQK---FFEPDGYTIQSIANACAGMGSLSLG-----------IVNDVLLNTSLVDMY 262
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTF 237
KCGSL +A ++F MP++DV SW++MI G + +G A+E FG M R + P+ TF
Sbjct: 263 CKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITF 322
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVLSAC+H GLV EG + D M ++ I P + HYGC+VDLL RAGL+D+A ++++M
Sbjct: 323 VGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMP 382
Query: 298 VKPDSTIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKV 355
++PD IWR+LL AC + + V L E + ++E + SG YVLL +Y+S W V
Sbjct: 383 MRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDV 442
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M +KG+ PGCS+I + GV HEF D SHP+ EIY LD I ++++ GY
Sbjct: 443 GMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYS 502
Query: 416 AEIT-SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ + + + + + K +L HSE+LAIAFG+L T PG IR+ KNLR+C +CH K+
Sbjct: 503 PDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKL 562
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S V+NRE+I+RDR+RFHHF++G CSC DYW
Sbjct: 563 ISRVFNREIIVRDRIRFHHFKDGACSCMDYW 593
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/506 (38%), Positives = 291/506 (57%), Gaps = 2/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++AY ++ P LF++MR RI + + + + LR G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 61 YQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ L D + ++ +Y+ A +F+ +P D ++WN +IS Y +N +A+ ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
N+ EE + T + VL AC+ GAL G K+H + ++G + + SL MY
Sbjct: 439 -NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 497
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A +F +P + V W+ +I+ +GHG A+ F M GV PD TF
Sbjct: 498 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLVDEG + M D+GI P++ HYGC+VD+ GRAG L+ A + I SM ++
Sbjct: 558 LLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ 617
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD++IW LL ACR+H +V LG+ EHL E++ + G +VLL N+Y+S G WE V E+R
Sbjct: 618 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIR 677
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ KGL+ TPG S++ + V F + +HP E+Y+ L + +LK+ GYV +
Sbjct: 678 SIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHR 737
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ +EK + L HSE+LAIAF ++ATP TTIR+ KNLR+C DCH+ K +S +
Sbjct: 738 FVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKIT 797
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 798 EREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 165/351 (47%), Gaps = 14/351 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y S + +E L +R + + C + G+ IH+ ++ G
Sbjct: 222 MISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+DLY+ F + + K+FD + RD ++WN +I Y N++ A+ LF
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAMYS 179
+ S +PD +T + + + LG + + + G+ + + N+++ MY+
Sbjct: 338 EMRL--SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-TFT 238
K G + A VF +P DV+SW+ +ISG A NG +AIE + M+ G +Q T+
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL ACS G + +GM R+ K+ G+ ++ + D+ G+ G L+ A L +
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP- 513
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS 348
+ +S W TL+ H H GE+ + E L D++ + L S+
Sbjct: 514 RVNSVPWNTLIACHGFHGH---GEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 41 MKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
+K C +++ G +IH L+ G+ D + +L+ LYS ++ A LFDE+P RD +W
Sbjct: 160 LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N +IS Y ++ ++AL L + L D VT + +L AC G G IH Y
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLR------AMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+HG S++ + N LI +Y++ G L +VF M +D++SW+++I +N AI
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M+ + + PD T + S S G + + L +I VV +
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ GL+D A + + D W T++
Sbjct: 394 YAKLGLVDSARAVFNWLP-NTDVISWNTII 422
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 12/332 (3%)
Query: 37 IKCCMKFCS-LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
+ ++C+ L +HAR++ + + L++LY A FD I RD
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
AWN++IS Y R + + + F +L SG PD T VL+AC + G KI
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCF-SLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI 172
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + G+ + + SLI +YS+ ++G A +F MP +D+ SW+AMISG +G+
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
++A+ ++ D T +LSAC+ G + G+ + S G+ +
Sbjct: 233 KEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNK 287
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ- 334
++DL G L ++ M V+ D W +++ A +++ + + + + Q
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
+ + L ++ S +GD + ++ F KG
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 169 NLCNS--LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA-M 225
N+C S L+ +Y G++ +A F + +DV +W+ MISG G+ + I F M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+G+ PD +TF VL AC ++D + ++ FG + +++ ++ L R
Sbjct: 145 LSSGLTPDYRTFPSVLKACR--TVIDGNKIHC--LALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL-GACR---IHKHVTLGERVIEHLIELKAQESGDYVL 341
+ A L M V+ D W ++ G C+ + +TL L+A +S V
Sbjct: 201 VGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLSN-------GLRAMDSVTVVS 252
Query: 342 LLNLYSSVGDWEKVKELREFMNEKGLQT 369
LL+ + GD+ + + + + GL++
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLES 280
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 299/505 (59%), Gaps = 4/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + PEE LF +M+ + + + ++ + ++ C G QIH +++ G
Sbjct: 375 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D+Y+ A K+F++I ++ V WN +I + +N + +A+ LFD
Sbjct: 435 -NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFD 493
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + K D +T L V+QAC+HLG LE G+ +H + +G L +L MYSK
Sbjct: 494 QMYM--NCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSK 551
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L MA VF M E+ +VSWS MI+G M+G I F M +G+ P+D TF +
Sbjct: 552 CGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHI 611
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH G V+EG ++ + MS +FG+ P H+ C+VDLL RAG L+ AYQ+ITS+
Sbjct: 612 LSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPA 670
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+S+IW LL CRIHK + + + + ++L+++ ++G Y LL N+Y+ G W+K ++R
Sbjct: 671 NSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRS 730
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KGL+ PG STI + ++ F D SH + +IY+ L+ + Y +E +
Sbjct: 731 MMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDN 790
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ K N + HSEKLAIAFG++ T PGTT+R++KNLR+C DCH+FAK+ S +
Sbjct: 791 SIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITG 850
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR G CSCNDYW
Sbjct: 851 REIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 188/406 (46%), Gaps = 41/406 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
+++ Y EE L+ +M Q + + F +K C F L G ++H RV++
Sbjct: 70 LIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKC 129
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G++ D+ + T+L+ +Y +ACK FD +P RD VAW+ ++ +++N + + L +F
Sbjct: 130 GFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMF 189
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +PD VT L V +AC+ LG+L G +H Y+ S +L NSLI MY
Sbjct: 190 SQMISE--AVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYG 247
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G L A +F+ +P + W+ MIS +G ++A+ F MQ + P+ T G
Sbjct: 248 KLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVG 307
Query: 240 VLSACSHCGLVDEG---------------MMFLD----RMSKDFGILPNIHH-------- 272
VL AC+ G V EG + FL + D G L + H
Sbjct: 308 VLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEK 367
Query: 273 ----YGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ ++ + R G ++A L M G+ PDS + L AC LG ++
Sbjct: 368 TILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIH 427
Query: 326 EHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT 369
++I K D+V L+++Y+ G ++ E + EK L T
Sbjct: 428 GYII--KTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVT 471
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V + + EG +F +M + + + + C + SL G +H V+R
Sbjct: 172 IVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRRE 231
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ L +L+ +Y + A +LF+ +P R T W +ISCY ++ ++AL +F
Sbjct: 232 IESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFA 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN-LCNSLIAMYS 179
+ +E +P+ VT + VL ACA LG ++ G +H ++ +++ L +L+ +Y+
Sbjct: 292 KM--QEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 349
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
G+L +VF+ + EK ++SW+ +IS NG +A+ F MQ G+ PD +
Sbjct: 350 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 409
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
LSAC G + K N ++D+ + G + A ++ + K
Sbjct: 410 SLSACGTISFSQLGAQIHGYIIKTGNF--NDFVQNALIDMYAKCGFVHSANKMFEKIKEK 467
Query: 300 PDSTIWRTLL 309
T W +++
Sbjct: 468 SLVT-WNSMI 476
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA + G T L++ Y+ + ++FD P+ D+ W VLI CY+
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+A+ L+ + ++ + + VL+AC+ G L G K+H + + G+ S +
Sbjct: 79 FFEEAVSLYHEMVYQDQ-TQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
SL+ MY + L A + F MP +DVV+WS+++ NG + ++ F M V
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197
Query: 231 FPDDQTFTGVLSACSHCG 248
PD T V ACS G
Sbjct: 198 EPDSVTMLSVTEACSELG 215
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 309/552 (55%), Gaps = 54/552 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
+++ Y + +G LF ++ + +P N F + C +K C+ +G G QIH
Sbjct: 87 IIKCYVENQFSHDGIVLFHELVHEYLPDN-----FTLPCVIKGCARLGVVQEGKQIHGLA 141
Query: 57 LRDGYQLDSQLMTTLMDLYST------FEKSFE--------------------------- 83
L+ G+ D + +L+++YS K F+
Sbjct: 142 LKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMING 201
Query: 84 ---------ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
A +LF ++P D V WN++I+ Y N + DA+ +F + + G +P
Sbjct: 202 YMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK--LGSRPSHA 259
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T + VL A + L L G IH Y+ ++G+ L SLI MY+KCG + A VF+ +
Sbjct: 260 TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAI 319
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
+K V W+A+I GL ++G A+ F M + G+ P+ F GVL+AC+H GLVD+G
Sbjct: 320 QKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGR 379
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+ D M ++ I P + HYGC+VD+L RAG L++A I +M + P+ IW +LLG R
Sbjct: 380 QYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRN 439
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
H + +GE + +IE+ + G Y+LL N+Y++ G WEKV +RE M ++G + PGCS
Sbjct: 440 HGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCS 499
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL-GAEEKGNA 433
++ KG +HEF+V D+SHP+ EIY + E+ ++LK G+V + T L + G +EK
Sbjct: 500 SVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAE 559
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L HSE+LAIAFG++ PG IR+ KNLR+C DCH+ K+LS +Y+RE+I+RD RFHH
Sbjct: 560 LENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHH 619
Query: 494 FREGRCSCNDYW 505
F+ G CSC DYW
Sbjct: 620 FKNGSCSCMDYW 631
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 165/391 (42%), Gaps = 82/391 (20%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYS--TFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
Q+HA L+ + + L+ LYS A +FD I +R + WN +I CY+
Sbjct: 34 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 93
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
NQ + D + LF L E PD+ T V++ CA LG ++ G++IH + G+GS +
Sbjct: 94 NQFSHDGIVLFHELVHEYL---PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDV 150
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV----------------------------- 199
+ SL+ MYSKCG + A +VF GM +KDV
Sbjct: 151 FVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDS 210
Query: 200 -------------VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
V+W+ MI+G +NG DA++ F M + G P T VLSA S
Sbjct: 211 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 270
Query: 247 CGLVDEGMMFLDRMSKDF----GIL--------------------------PNIHHYGCV 276
++ +G M K+ GIL + H+ +
Sbjct: 271 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAI 330
Query: 277 VDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI-ELK 332
+ LG G+ + A L M G+KP++ I+ +L AC V G + + ++ E K
Sbjct: 331 IVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYK 390
Query: 333 AQESGD-YVLLLNLYSSVGDWEKVKELREFM 362
+ + + Y L+++ G E+ K E M
Sbjct: 391 IEPTLEHYGCLVDILCRAGHLEEAKNTIENM 421
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS--KCGSLGMAFEVFKGM 194
L + Q C+ A + E++H + + + + + L+A+YS K LG A +F +
Sbjct: 20 LSLFQTCS---APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI 76
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
+ ++ W+ +I N D I F + PD+ T V+ C+ G+V EG
Sbjct: 77 QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGK 135
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
+ ++ G ++ G +V++ + G +D A ++ M + D +W +L+ +
Sbjct: 136 Q-IHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGNLV 193
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ + + +SGD+ L L+ + W+ V
Sbjct: 194 SWNAMINGYM----------KSGDFDSALELFYQMPIWDLV 224
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 312/510 (61%), Gaps = 9/510 (1%)
Query: 1 MVRAYSM---SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
M+ YS +SS LF +M + + N FA S +KCC S + G QIH
Sbjct: 163 MITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCW 222
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+ G+Q + + ++L+D+Y+ + E+ +FDE+ ++ V+WN LIS + R +AL
Sbjct: 223 KYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALG 282
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + RE G + LL + + G+LE G+ +H ++ + G + N+L+ M
Sbjct: 283 LFVKMQREGFGATEFTYSALLC--SSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHM 340
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQT 236
Y+K G++ A +VF + + DVVS ++M+ G A +G G++A+E F M + P+D T
Sbjct: 341 YAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDIT 400
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VL+ACSH GL+DEG+ + + M K +G+ P + HY VVDL GRAGLLDQA I M
Sbjct: 401 FLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEM 459
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++P++TIW LLGA ++HK+ +G + ++EL G + LL N+Y+S G W+ V
Sbjct: 460 PIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVA 519
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R+ M + GL+ P CS + ++ VH F +D+SHP+ N++Y+M + +N+++K GYV
Sbjct: 520 KVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVP 579
Query: 417 EITSELHN-LGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ TS +H + +EK L YHSEKLA+AF +L T PG+ IR+ KN+R+C DCH+ K +
Sbjct: 580 D-TSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYV 638
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S V RE+I+RD RFHHFR+G CSC DYW
Sbjct: 639 SLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 122/229 (53%), Gaps = 9/229 (3%)
Query: 41 MKFCSLMGGLQ----IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C+++G L+ +H ++ ++ D + +++ +Y+ A ++FDE+ +D
Sbjct: 98 LKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDV 157
Query: 97 VAWNVLISCYIRN---QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
V W +I+ Y ++ AL LF + R+ G +P++ +++ C LG+ G+
Sbjct: 158 VTWTSMITGYSQDGYASSATTALVLFLEMVRD--GLRPNEFALSSLVKCCGFLGSCVDGK 215
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+IH ++G+ + + +SL+ MY++CG L + VF + K+ VSW+A+ISG A G
Sbjct: 216 QIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKG 275
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
G +A+ F MQR G + T++ +L + S G +++G M K
Sbjct: 276 EGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMK 324
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 16/266 (6%)
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + L + D +N +PD +L+ C LG L+ G+ +H ++ + + +
Sbjct: 69 NPNSTTGLHVLDLINN--GSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDL 126
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES---FGAM 225
+ NS++ MY+KCGSL +A +VF M KDVV+W++MI+G + +G+ A + F M
Sbjct: 127 VIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEM 186
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
R G+ P++ + ++ C G +G K +G N+ +VD+ R G
Sbjct: 187 VRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWK-YGFQENVFVGSSLVDMYARCGE 245
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL-GACRIHKHVTLGERVIEHLIELKAQESG----DYV 340
L ++ + + K + + W L+ G R + GE + ++++ + G Y
Sbjct: 246 LRESRLVFDELESKNEVS-WNALISGFARKGE----GEEALGLFVKMQREGFGATEFTYS 300
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKG 366
LL S+ G E+ K L M + G
Sbjct: 301 ALLCSSSTTGSLEQGKWLHAHMMKSG 326
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ + E LF +MR + + + + + C +L G Q+HA ++R
Sbjct: 245 MIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 304
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
YQ + + + L+D+Y + A +F ++ ++ V+W ++ Y +N + +A+ +F
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFC 364
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + +G +PDD T V+ +CA+L +LE G + H G S + + N+L+ +Y K
Sbjct: 365 DM--QNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGK 422
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ + +F M D VSW+A++SG A G + + F +M G PD TF GV
Sbjct: 423 CGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGV 482
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS GLV +G + M K+ I+P HY C++DL RAG L++A + I M P
Sbjct: 483 LSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSP 542
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W +LL +CR H+++ +G+ E L++L+ + Y+LL ++Y++ G WE+V LR+
Sbjct: 543 DAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRK 602
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGL+ PGCS I K VH F DD S+P ++IY L+++N ++ GYV ++ S
Sbjct: 603 GMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNS 662
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EK L++HSEKLAIAFG++ PPG IRV KNLR+C DCHN K +S +
Sbjct: 663 VLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQ 722
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFH F++GRCSC D+W
Sbjct: 723 REILVRDAARFHLFKDGRCSCGDFW 747
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 179/381 (46%), Gaps = 69/381 (18%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
GLQ+H V++ G+Q + + L+D+YS F A + FDE+P+++ V +N LI+ +R
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMR 220
Query: 109 NQRTRDALCLFDNLNREES-----------------------------GCKPDDVTCLLV 139
R D+ LF ++ ++S + D T V
Sbjct: 221 CSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSV 280
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L AC + AL+ G+++H YI Y + + ++L+ MY KC S+ A VF+ M K+V
Sbjct: 281 LTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNV 340
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
VSW+AM+ G NG+ +A++ F MQ G+ PDD T V+S+C++ ++EG F R
Sbjct: 341 VSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 400
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM----------------------- 296
G++ I +V L G+ G ++ +++L + M
Sbjct: 401 ALVS-GLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANE 459
Query: 297 -----------GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI-ELKAQESGD-YVLLL 343
G KPD + +L AC V G ++ E +I E + D Y ++
Sbjct: 460 TLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMI 519
Query: 344 NLYSSVGDWEKVKELREFMNE 364
+L+S G +++E R+F+N+
Sbjct: 520 DLFSRAG---RLEEARKFINK 537
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 85/276 (30%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR-- 108
+IH +++ + L+ L+ Y+ F++ A ++FD++PQR+ +WN L+S Y +
Sbjct: 30 KIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLA 89
Query: 109 ----------NQRTRDA------------------------LCLFD---NLNREESGCKP 131
TRD L L++ NLNR
Sbjct: 90 CLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIA----- 144
Query: 132 DDVTCLLVL---QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
++ +L+L Q C HLG ++H ++ + G+ S + + + L+ MYSK G + A
Sbjct: 145 --LSTMLILASKQGCVHLGL-----QVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 189 EVFKGMPEKDVV-------------------------------SWSAMISGLAMNGHGRD 217
+ F MPEK+VV SW+AMI+G NG R+
Sbjct: 198 QAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDRE 257
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
AI+ F M+ + D TF VL+AC + EG
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEG 293
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N+L++ YSK L VF MP +D+VSW+++IS A G +++++ M G F
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 232 PDDQ-TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
++ + +L S G V G+ + K FG + +VD+ + GL+ A
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVK-FGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 291 QLITSMGVKPDSTIWRTLLGA 311
Q M K + ++ TL+
Sbjct: 198 QAFDEMPEK-NVVMYNTLIAG 217
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 267/422 (63%), Gaps = 2/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD +P RD V+W+ +I Y++ AL +F N+ + G K ++ + L A
Sbjct: 218 AREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQ--GVKANEAAIVTALSAA 275
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG LE G+ +H + G +NL +LI MYSKCGS+ A EVF MP +DV +W+
Sbjct: 276 AQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWN 335
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+MI GLA +G G DA++ F G P TF GVL+ACS GLVDEG + M++
Sbjct: 336 SMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEK 395
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ I + HYGC+VDLL RAGL+ +A +LI M + PD +W T+L AC+ H V LG
Sbjct: 396 YDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGIT 455
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
V LIEL G YVLL ++Y+ W++V+++R+ M+ +G + G S + G+VH
Sbjct: 456 VGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVH 515
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
+F+V D++H IY ML IN++L AGYV +++S LH++G EEK +A+ HSE+LAI
Sbjct: 516 KFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAI 575
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+G + G+ IR+ KNL +C DCH F+K+++ V+ RE+++RD RFHH ++G+CSC+D
Sbjct: 576 AYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRDGSRFHHMKDGKCSCHD 635
Query: 504 YW 505
YW
Sbjct: 636 YW 637
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y PE +F+ M + + N A A+ + L G +H V R G
Sbjct: 236 VIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVG 295
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L+D+YS A ++FD +P+RD AWN +I + DA+ LF+
Sbjct: 296 MTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFE 355
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
E G P +T + VL AC+ G ++ G + + ++E + S+M ++ + S
Sbjct: 356 KFVSE--GFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLS 413
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G + A E+ +GM D V W ++S +G
Sbjct: 414 RAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHG 448
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N+++A Y + G +G+A EVF GMP +D VSWS +I G G A+ F M GV
Sbjct: 203 NAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVK 262
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
++ LSA + GL+++G F+ + K G+ +++ ++D+ + G + A +
Sbjct: 263 ANEAAIVTALSAAAQLGLLEQG-KFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKE 321
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-----SGDYVLLLNLY 346
+ +M + D W +++ C + H LG ++ L E E S +V +LN
Sbjct: 322 VFDAMP-RRDVFAWNSMI--CGLATH-GLGHDAVQ-LFEKFVSEGFCPTSITFVGVLNAC 376
Query: 347 SSVGDWEKVKELREFMNEK 365
S G ++ + + M EK
Sbjct: 377 SRTGLVDEGRRYFKLMAEK 395
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 302/538 (56%), Gaps = 36/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + E F M I + + C + L G +H V
Sbjct: 208 LISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKR 267
Query: 61 YQLDSQLMTTLMDLYST------FEKSFEA-----------------CK---------LF 88
+ +L+ L+D+Y+ + F+A CK LF
Sbjct: 268 MLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLF 327
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++ D + +N LI+ YI R R+AL LF + R G D+ T + +L A A LGA
Sbjct: 328 DQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRH--GLGADNFTMVGLLTASASLGA 385
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L G +H I + + L +L+ MY KCG + A FK M +DV +WSAMI G
Sbjct: 386 LPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGG 445
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G+ A+E F M+ G + T+ VL+ACSH L+DEG ++ D M I P
Sbjct: 446 LAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRP 505
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
I HYGC++DLLGR+GLLD+A L+ +M ++P++ IW ++L ACR+HK+V L + HL
Sbjct: 506 QIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHL 565
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L+ E YV + N+Y WE ++R M ++G++ T G S+I + G VH+F+V
Sbjct: 566 LKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVG 625
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALSYHSEKLAIAFGV 447
D SHP+I EI M++EI ++LK AGY + ITS++ ++ EEK AL HSEKLAIAFG+
Sbjct: 626 DRSHPQIAEIVVMMEEIGRRLKSAGY-SPITSQITVDVDEEEKEQALLAHSEKLAIAFGL 684
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ P + + KNLR+C DCH+ K++S ++NRE+I+RDR RFHHFR G CSCND+W
Sbjct: 685 VSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 163/393 (41%), Gaps = 72/393 (18%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCS-LMGGLQIHARVLRDGYQL 63
+ SS P+ L+ +M +P + F F KCC + + ++ G +HA R
Sbjct: 78 FRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPS 137
Query: 64 DSQLMTT-LMDLYSTFEKSFEACKLFDEI------------------------------- 91
L+ + ++ +Y+ +A + FDE
Sbjct: 138 AVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARA 197
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
P R+ V W LIS Y R R +A+ F+++ + G PD+VT + +L AC L L F
Sbjct: 198 PVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSD--GIAPDEVTVIGMLSACGQLKDLNF 255
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG------------------ 193
G +H + + L +LI MY+KCG G A EVF
Sbjct: 256 GCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYC 315
Query: 194 --------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
M + DV++++++I+G G R+A+ F M+R G+ D+ T G
Sbjct: 316 KVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVG 375
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L+A + G + +G + + + +++ ++D+ + G +++A M V+
Sbjct: 376 LLTASASLGALPQGRALHACIEQRL-VERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR 434
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
D W ++G + +G+ +EH +K
Sbjct: 435 -DVHTWSAMIGGLAFNG---MGKAALEHFFWMK 463
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD +P + L +C+ + + L+ ++ + PD T + + C
Sbjct: 56 ALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVD--VPPDAFTFHFLFKCC 113
Query: 144 AHLGA-LEFGEKIHRYISEHGYGSKMNLCNS-LIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
A GA + G +H S + L S +I MY++ G G A F KDVV+
Sbjct: 114 ARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVA 173
Query: 202 WSAMISGLA--------------------------MNGHGR-----DAIESFGAMQRAGV 230
W+ +ISGLA ++G+ R +A++ F +M G+
Sbjct: 174 WTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGI 233
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD+ T G+LSAC ++ G L + D +L + ++D+ + G +A
Sbjct: 234 APDEVTVIGMLSACGQLKDLNFGCS-LHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAR 292
Query: 291 QLITSMGVKPDSTIWRTLL-GACRIHKHVTLGERVIEHL 328
++ ++G W ++ G C++ HV + + + +
Sbjct: 293 EVFDALGRGRGPQPWNAMIDGYCKV-GHVDIARSLFDQM 330
>gi|125583346|gb|EAZ24277.1| hypothetical protein OsJ_08028 [Oryza sativa Japonica Group]
Length = 613
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/491 (37%), Positives = 287/491 (58%), Gaps = 4/491 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF M + + + F K C + +L G Q+ +++ G+Q D +L+ Y
Sbjct: 125 LFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEHSQNSLISFYG 184
Query: 77 TFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
++ A + F+++ ++ T +W+ L++ Y R R + + F + R +G +PD+
Sbjct: 185 KCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAGRWAECVESFGAMVR--AGWRPDES 242
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
+ + L ACAHLGA + G IH + + + SL+ MY+KCG + A VF M
Sbjct: 243 SMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMSTSLVDMYAKCGCIENAAAVFDAM 302
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
+K+ ++SAM+SGLA++G GR A+E F AM R G PD + GVL+ACS GL++EG+
Sbjct: 303 DDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYVGVLNACSRAGLLEEGL 362
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
DRM + + PN HYGC+VDL+ RAG LD A LI SM P T WR+LL ACRI
Sbjct: 363 RCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTDTAWRSLLNACRI 422
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
H ++ L ER ++ L L A +GDY++L ++++ + + R ++GL PG S
Sbjct: 423 HGNLELAERALQELERLGATNAGDYIILSDMHARAHNRDAAAARRTEAVDRGLAQAPGYS 482
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
+ + G H FV D SHPR ++IY+ML ++ QL+ GY + + + G EEK +
Sbjct: 483 AVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRFEGYTPDTSELALDAGEEEKRRVV 542
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
+ HS+KLA+AFG+L+TP G +RV NLR+ +CH ++ ++S ++ RE+++RDR RFH F
Sbjct: 543 AAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGREIVVRDRNRFHRF 602
Query: 495 REGRCSCNDYW 505
+ G CSC +YW
Sbjct: 603 KRGACSCRNYW 613
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 295/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y +S + L+ M++ ++ A K L G QIHA V++ G
Sbjct: 1109 IMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRG 1168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD + + ++D+Y + A ++F EIP D VAW +IS + N + AL +
Sbjct: 1169 FNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYH 1228
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ S +PD+ T +++AC+ L ALE G +IH I + + SL+ MY+K
Sbjct: 1229 QMRL--SKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAK 1286
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A +FK + + SW+AMI GLA +G+ ++A++ F M+ GV PD TF GV
Sbjct: 1287 CGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGV 1346
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV E M K++GI P I HY C+VD L RAG +++A ++I+SM +
Sbjct: 1347 LSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEA 1406
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++++RTLL ACR+ G+RV E L+ L+ +S YVLL N+Y++ WE V R
Sbjct: 1407 SASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARN 1466
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ PG S + LK VH FV D SH + IY ++ I K+++ GYV +
Sbjct: 1467 MMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDF 1526
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ E+K +L YHSEKLAIA+G++ TPP TT+RV KNLR+C DCH+ K +S V+
Sbjct: 1527 ALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFK 1586
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR G CSC DYW
Sbjct: 1587 REIVLRDANRFHHFRNGICSCGDYW 1611
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 164/377 (43%), Gaps = 33/377 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ E LF+ M + + + C+++ +++ + H R G
Sbjct: 801 LVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH----RTG 856
Query: 61 YQLDSQLMTTLMDLYSTFEKSFE-------ACKLF-DEIPQRDTVAWNVLISCYIRNQRT 112
++ D + TL + + E A KLF + D + WN +S +++
Sbjct: 857 FRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEA 916
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+A+ F ++ C D +T +++L A L LE G++IH + G +++ N
Sbjct: 917 WEAVDCFVDMINSRVAC--DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGN 974
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
LI MY K GS+ A VF M E D++SW+ MISG ++G ++ F + R + P
Sbjct: 975 CLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLP 1034
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRM----SKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
D T VL ACS EG +L + G++ + ++D+ + G +++
Sbjct: 1035 DQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEE 1090
Query: 289 A-YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLN 344
A + + G D W ++ H ++ G+ + + QESG D + L+N
Sbjct: 1091 AEFLFVNQDGF--DLASWNAIM-----HGYIVSGDFPKALRLYILMQESGERSDQITLVN 1143
Query: 345 LYSSVGDWEKVKELREF 361
+ G +K+ ++
Sbjct: 1144 AAKAAGGLVGLKQGKQI 1160
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 39/306 (12%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+GF+LF +R+ + T + K C+ S +H ++ G Q D + L+
Sbjct: 743 DGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALV 802
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ F EA LFD + RD V WNV++ Y+ +A+ LF +R +G +PD
Sbjct: 803 NIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHR--TGFRPD 860
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISE----HGYGSKMNLCNSLIAMYSKCGSLGMAF 188
DVT L L K + I E Y +K+ MY GS
Sbjct: 861 DVT----------LRTLSRVVKCKKNILELKQFKAYATKL-------FMYDDDGS----- 898
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
DV+ W+ +S G +A++ F M + V D TF +L+ +
Sbjct: 899 ---------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLN 949
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
++ G + + G+ + C++++ +AG + +A + M + D W T+
Sbjct: 950 CLELGKQIHGIVMRS-GLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLISWNTM 1007
Query: 309 LGACRI 314
+ C +
Sbjct: 1008 ISGCTL 1013
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
C ++ + L G + HAR+L G+ D + L+ +Y+ A KLFD P
Sbjct: 659 CFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 93 --QRDTVAWNVLISCYIRN-QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
RD V WN ++S + ++ D LF L R S T V + C +
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRR--SVVSTTRHTLAPVFKMCLLSASP 776
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E +H Y + G + + +L+ +Y+K G + A +F GM +DVV W+ M+
Sbjct: 777 SASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAY 836
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+A+ F R G PDD T
Sbjct: 837 VDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
C +L+ L G++ H I G+ + N+LI MY+KCGSL A ++F P
Sbjct: 659 CFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 196 E--KDVVSWSAMISGLAMNG-HGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--SHCGLV 250
+ +D+V+W+A++S LA + D F ++R+ V T V C S
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
E L + G+ ++ G +V++ + GL+ +A L M V+ D +W ++
Sbjct: 779 SES---LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMK 834
Query: 311 A 311
A
Sbjct: 835 A 835
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/500 (39%), Positives = 291/500 (58%), Gaps = 2/500 (0%)
Query: 6 SMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
+ + P + L+ +M + + F + SL G ++H VLR G ++DS
Sbjct: 313 AQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDS 372
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ +L+ LY +S A LFD + ++ +V+WN +IS Y +N DAL LF L +
Sbjct: 373 FIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSD 432
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
G +P D+ + VL AC+ AL G++ H Y + + + S I MY+K G +
Sbjct: 433 --GFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIK 490
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+ VF G+ KD+ SW+A+I+ ++G G ++IE F M++ G PD TF G+L+ CS
Sbjct: 491 ESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCS 550
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLV+EG+ + + M GI P + HY CV+D+LGRAG LD A +L+ M +PDS +W
Sbjct: 551 HAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVW 610
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+LL CR + +G+ V E L+EL+ + +YV L NLY+ G W+ V+ +R+ + +
Sbjct: 611 SSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDI 670
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
GLQ GCS I L G VH FV D P+ E+ ++ K++ GY ++ LH++
Sbjct: 671 GLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDV 730
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
E+K L HSEKLAI FG+L T GTT+R+ KNLRICVDCHN +K +S V RE+II
Sbjct: 731 DEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIII 790
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RD RFHHF++G CSC DYW
Sbjct: 791 RDNKRFHHFKDGLCSCGDYW 810
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 16/319 (5%)
Query: 13 EGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E F LF +M+ Q+ I N + C++ L ++H +R G+Q D +
Sbjct: 218 EAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGF 277
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ Y+ A ++F + + +WN LI +N R AL L+ + SG P
Sbjct: 278 VAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLY--IQMTYSGLVP 335
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T +L A AHL +L +G+++H ++ HG + SL+++Y CG A +F
Sbjct: 336 DWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLF 395
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
GM EK VSW+AMISG + NG DA+ F + G P D VL ACS
Sbjct: 396 DGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ----- 450
Query: 252 EGMMFLDRMSKDFG----ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
+ + L + + + ++ ++ +D+ ++G + ++ + + K D W
Sbjct: 451 QSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNK-DLASWNA 509
Query: 308 LLGACRIHKHVTLGERVIE 326
++ A +H GE IE
Sbjct: 510 IIAAYGVHGD---GEESIE 525
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 141/333 (42%), Gaps = 40/333 (12%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
+ C + + G++IH ++ G D ++ +L+D+YS EA LFD+ +++
Sbjct: 140 VLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKN 199
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V+WN +I +A LF + +E + ++VT L +L AC + L +++
Sbjct: 200 AVSWNTMIGGLCTKGYIFEAFNLFREMQMQED-IEVNEVTVLNILPACLEISQLRSLKEL 258
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H Y HG+ + N +A Y+KCG L A VF M K V SW+A+I G A NG
Sbjct: 259 HGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDP 318
Query: 216 RDAIESFGAMQRAGVFPD---------------------------------DQTFTGV-- 240
R A+ + M +G+ PD +F G+
Sbjct: 319 RKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISL 378
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS HCG + D M + + N G + L L+ ++ + S G +P
Sbjct: 379 LSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI--LFRKLVSDGFQP 436
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
++LGAC + LG+ H LKA
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKET--HCYALKA 467
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 135/298 (45%), Gaps = 8/298 (2%)
Query: 21 MRQKRIPTNPF-ACSFAIKCCMKFC--SLMGGLQ--IHARVLRDGYQLDSQLMTTLMDLY 75
M K I F A +F C +K C SL GL IH V++ G LD + L+ +Y
Sbjct: 17 MFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMY 76
Query: 76 STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVT 135
F A K+F +P R+ V+WN +IS + N ++D + + E G PD T
Sbjct: 77 GKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIAT 136
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ VL CA ++ G +IH + G + + NSL+ MYSKCG L A +F
Sbjct: 137 LVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNN 196
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGM 254
K+ VSW+ MI GL G+ +A F MQ + + ++ T +L AC + +
Sbjct: 197 RKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL-RSL 255
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
L S G + V + G+L A ++ SM K ++ W L+G C
Sbjct: 256 KELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS-WNALIGGC 312
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 298/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS SS P + +M+ + + F + C + SL G ++H ++R+
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ DS + +L+ LY + A LFD + + V+WN +++ Y++N AL LF
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFR 584
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G +P +++ + V AC+ L +L G + H Y + + S+I MY+K
Sbjct: 585 QMVL--YGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAK 642
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ +F+VF G+ E+ V SW+AM+ G ++G ++AI+ F MQR G PD+ TF GV
Sbjct: 643 NGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGV 702
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVK 299
L+AC+H GLV EG+ +LD+M FG+ P + HY CV+D+L RAG LD+A ++ T M +
Sbjct: 703 LTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEE 762
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P IW LL +CRIHK++ +GE++ L + ++ +YVLL NLY+ G W++V+++R
Sbjct: 763 PGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVR 822
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E L+ GCS I L G V FV + S EI + + +++ GY + +
Sbjct: 823 QRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTS 882
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S H+L EEK L HSEKLAI +G++ T GTT+RV KNLRICVDCHN AK++S V
Sbjct: 883 SVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVM 942
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC DYW
Sbjct: 943 EREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 19/284 (6%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T ++ +YS ++ +FD + +++ WN +IS Y RN+ + L +F +
Sbjct: 116 DDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKM- 174
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
ESG PD+ T V++ACA + ++ G +H + + + + N+L++ Y GS
Sbjct: 175 ITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGS 234
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA----GVFPDDQTFTG 239
+ A VFK MPE+++VSW++MI + NG + G M PD T
Sbjct: 235 VSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLAT 294
Query: 240 VLSACS---HCGLVDEGMMFLD-RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
VL C+ G V +G+ L ++S D ++ N ++D+ + G ++ A Q+I
Sbjct: 295 VLPVCARDREIG-VGKGVHGLAMKLSLDKEVVVN----NALMDMYSKCGCINDA-QVIFK 348
Query: 296 MGVKPDSTIWRTLLG----ACRIHKHVTLGERVIEHLIELKAQE 335
+ + W T++G A IHK L +++ +L+A E
Sbjct: 349 LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADE 392
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 172/440 (39%), Gaps = 75/440 (17%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI---------------------------------P 27
++ YSM SP++ +F+ +R+K + P
Sbjct: 123 VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLP 182
Query: 28 TN-PFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
N F C +K C + GL +H V++ D + L+ Y T +A +
Sbjct: 183 DNFTFPC--VVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR 240
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL--NREESGCKPDDVTCLLVLQACA 144
+F +P+R+ V+WN +I + N + + L + +E PD T VL CA
Sbjct: 241 VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCA 300
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
+ G+ +H + ++ + N+L+ MYSKCG + A +FK K+VVSW+
Sbjct: 301 RDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNT 360
Query: 205 MISGLAMNGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSACS-----------HC-GLV 250
M+ G + G + M G + D+ T + C HC L
Sbjct: 361 MVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLK 420
Query: 251 DEGMMFLDRMSKDF-------GILPNIHHYGCVVD---------LLG------RAGLLDQ 288
E + + ++ F G L H C + L+G L
Sbjct: 421 QEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLD 480
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDYVLLLNLYS 347
AY + S G+ PD +LL AC K + LG+ V +I + + +S Y+ LL+LY
Sbjct: 481 AYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYI 540
Query: 348 SVGDWEKVKELREFMNEKGL 367
G+ L + M +K L
Sbjct: 541 HCGELSTAHVLFDAMEDKTL 560
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 27/324 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK--RIPTNPFACSFA--IKCCMKFCSLMGGLQIHARV 56
M+R +S + EE F L +M +K I P + A + C + + G +H
Sbjct: 256 MIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLA 315
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
++ + + LMD+YS +A +F ++ V+WN ++ + D
Sbjct: 316 MKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGF---SAAGDIH 372
Query: 117 CLFDNLNREESG---CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL-CN 172
FD L + +G + D+VT L + C L +++H Y + + L N
Sbjct: 373 KTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVAN 432
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+ +A Y+KCGSL A VF + K V SW+A+I G + + R +++++ M+ +G+ P
Sbjct: 433 AFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLP 492
Query: 233 DDQTFTGVLSACSHC-----GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
D T +LSACS G G++ +R+ +D + Y ++ L G L
Sbjct: 493 DLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV------YISLLSLYIHCGELS 546
Query: 288 QAYQLITSMGVKPDSTI--WRTLL 309
A+ L +M D T+ W T++
Sbjct: 547 TAHVLFDAM---EDKTLVSWNTMV 567
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 44/269 (16%)
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMN-LCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
QA ++ G KIH+ +SE S + LC +I MYS CGS + VF + +K++
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACS-----HCGLVDEG 253
W+A+IS + N + +E F M +G+ PD+ TF V+ AC+ GL G
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208
Query: 254 MMFLDRMSKD-----------------------FGILP--NIHHYGCVVDLLGRAGLLDQ 288
++ R+ +D F I+P N+ + ++ + GL ++
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268
Query: 289 AYQLITSMGVK-------PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL 341
+ L+ M K PD T+L C + + +G+ V H + +K + V+
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGV--HGLAMKLSLDKEVVV 326
Query: 342 ---LLNLYSSVGDWEKVKELREFMNEKGL 367
L+++YS G + + + N K +
Sbjct: 327 NNALMDMYSKCGCINDAQVIFKLNNNKNV 355
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/506 (38%), Positives = 298/506 (58%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ ++ E L K++ K + + + C L ++H L+ G
Sbjct: 285 VIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG 344
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + ++D+Y+ A ++F+ I +D V+W +ISCY+ N +AL +F
Sbjct: 345 LS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFY 403
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E+ +PD +T + +L A A L AL G++IH +I G+ + + NSL+ MY+
Sbjct: 404 LM--KETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYAC 461
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A++VF K +V W+ MI+ M+G G+ A+E F M+ + PD TF +
Sbjct: 462 CGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLAL 521
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL++EG L+ M + + P HY C+VDLLGRA L++AY + SM ++P
Sbjct: 522 LYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEP 581
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LGACRIH + LGE + L++L G YVL+ N++++ G W+ V+E+R
Sbjct: 582 TAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRM 641
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEIT 419
M GL+ PGCS I + VH F+V D SHP +IYQ L +I ++L K GYV +
Sbjct: 642 RMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTK 701
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LHN+G EEK L HSE+LAIA+G+++T GT IR+ KNLR+CVDCH F K++S +
Sbjct: 702 LVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFF 761
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +G CSC D+W
Sbjct: 762 ERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 16/320 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS++ E LF +M++ + N + A++ C G++IHA +L+
Sbjct: 83 IISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSN 142
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
LD + L+ ++ F K A ++FDE+ ++D + WN +I+ + +N +AL F
Sbjct: 143 QVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFC 202
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +++ KPD+V+ + +L A LG L G++IH Y ++ S + + N+LI MYSK
Sbjct: 203 GL--QDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSK 260
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + A VF M KD++SW+ +I+ A N +A++ +Q G+ D
Sbjct: 261 CCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGST 320
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGI-----LPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
L ACS G+ L + G L ++ ++D+ G ++ A ++ S
Sbjct: 321 LLACS-------GLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFES 373
Query: 296 MGVKPDSTIWRTLLGACRIH 315
+ K D W +++ +C +H
Sbjct: 374 IKCK-DVVSWTSMI-SCYVH 391
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 143/292 (48%), Gaps = 10/292 (3%)
Query: 25 RIPTNPFACSFAIKCCMKFCSLMG----GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
R+ PF SF C +K C ++ G +IH +++ GY + +L+ +Y+
Sbjct: 2 RVLGVPFD-SFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 81 SFEACKLFDEIPQR-DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A KLFD + +R D V+WN +IS Y N + +AL LF + +++G + T +
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREM--QKAGVGANTYTLVAA 118
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
LQAC + G +IH I + + + N+L+AM+ + G + A +F + EKD
Sbjct: 119 LQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDN 178
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
++W++MI+G NG +A++ F +Q A + PD+ + +L+A G + G
Sbjct: 179 ITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
K++ + N+ ++D+ + + A + M + D W T++ A
Sbjct: 239 AMKNW-LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAA 288
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 303/506 (59%), Gaps = 7/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + ++ LF MR++ + N F +++ ++ + +IHA V++
Sbjct: 377 MISGYLQNGDTDQAVNLFSLMRREGVKPNHF--TYSTILTVQHAVFIS--EIHAEVIKTN 432
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ S + T L+D + +A K+F+ I +D +AW+ +++ Y + T +A +F
Sbjct: 433 YEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFH 492
Query: 121 NLNREESGCKPDDVTCLLVLQAC-AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L RE G KP++ T ++ AC A ++E G++ H Y + + + + +SL+ +Y+
Sbjct: 493 QLTRE--GIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYA 550
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G++ A E+FK E+D+VSW++MISG A +G + A+E F MQ+ + D TF G
Sbjct: 551 KRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIG 610
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V+SAC+H GLV +G + + M D I P + HY C++DL RAG+L +A +I M
Sbjct: 611 VISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFP 670
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +T+WR +L A R+H+++ LG+ E +I L+ Q S YVLL N+Y++ G+W + +R
Sbjct: 671 PAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVR 730
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M+++ ++ PG S I +K + F+ D+SHP + IY L E+N +L+ GY +
Sbjct: 731 KLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTN 790
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
H++ E+K LS+HSE+LAIAFG++AT P +++ KNLR+C DCH+F K++S V
Sbjct: 791 YVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVE 850
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF+ G CSC DYW
Sbjct: 851 KRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 41/396 (10%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
YS +E +LF + + + + + S + C + G Q+H + ++ G
Sbjct: 77 YSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHH 136
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ +L+D+Y+ + ++FDE+ RD V+WN L++ Y N+ LF +
Sbjct: 137 LSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQV 196
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G +PD T V+ A A+ GA+ G +IH + + G+ ++ +CNSLI+M SK G L
Sbjct: 197 E--GYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGML 254
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF M KD VSW++MI+G +NG +A E+F MQ AG P TF V+ +C
Sbjct: 255 RDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC 314
Query: 245 S-----------HCGLVDEG-----------MMFLDR---MSKDFGILPNIHHYGCVVDL 279
+ HC + G M+ L + + F + +H VV
Sbjct: 315 ASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSW 374
Query: 280 LG------RAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
+ G DQA L + M GVKP+ + T+L +H + +I+
Sbjct: 375 TAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV----QHAVFISEIHAEVIK 430
Query: 331 LKAQESGDY-VLLLNLYSSVGDWEKVKELREFMNEK 365
++S LL+ + +G+ ++ E + K
Sbjct: 431 TNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK 466
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 184/400 (46%), Gaps = 36/400 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + ++ + LF M+ + + + S I ++ G+QIHA V++ G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + +L+ + S +A +FD + +D+V+WN +I+ ++ N + +A F+
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ + +G KP T V+++CA L L +H + G + N+ +L+ +K
Sbjct: 294 NM--QLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
C + AF +F M + VVSW+AMISG NG A+ F M+R GV P+ T++
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411
Query: 240 VLSACSHCGLVDE----------------GMMFLDRMSKDFGI-----------LPNIHH 272
+L+ H + E G LD K I ++
Sbjct: 412 ILTV-QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIA 470
Query: 273 YGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLLGACRI-HKHVTLGERVIEHL 328
+ ++ +AG ++A ++ +T G+KP+ + +++ AC V G++ +
Sbjct: 471 WSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYA 530
Query: 329 IELKAQES-GDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
I+L+ + L+ LY+ G+ E E+ + E+ L
Sbjct: 531 IKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDL 570
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 299/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A S EE + +M + + + + C + L GL++HAR+LR G
Sbjct: 192 VLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGG 251
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + + L+D+Y + A +FD + R+ V W L++ Y++N ++L LF
Sbjct: 252 LMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFT 311
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++RE G P++ T ++L ACA + AL G+ +H + + G+ + + + N+LI MYSK
Sbjct: 312 CMDRE--GTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSK 369
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ ++ VF M +D+++W+AMI G + +G G+ A++ F M A P+ TF GV
Sbjct: 370 SGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGV 429
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV EG +L+ + ++F I P + HY C+V LL RAGLLD+A + + VK
Sbjct: 430 LSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKW 489
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D WRTLL AC +H++ LG R+ E ++++ + G Y LL N+Y+ W+ V +R+
Sbjct: 490 DVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRK 549
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ ++ PG S + ++ +H F+ + +HP +IY+ + ++ +K GYV I S
Sbjct: 550 LMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIAS 609
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K LSYHSEKLA+A+G++ P IR+ KNLR+C DCH K++S V N
Sbjct: 610 VLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTN 669
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHFR+G C+C D+W
Sbjct: 670 RLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 172/369 (46%), Gaps = 18/369 (4%)
Query: 13 EGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E LF+ M Q P N + + A+ C + G+Q H + + G + +
Sbjct: 99 EVLVLFKNMVSLQNACP-NEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSA 157
Query: 71 LMDLYSTFEKSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ +YS A ++ D +P D ++N +++ + + R +A+ + L R
Sbjct: 158 LVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAV---EVLRRMVD 214
Query: 128 GCKP-DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
C D VT + V+ CA + L+ G ++H + G + + LI MY KCG +
Sbjct: 215 ECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLN 274
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF G+ ++VV W+A+++ NG+ +++ F M R G P++ TF +L+AC+
Sbjct: 275 ARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAG 334
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
+ G + R+ K G ++ ++++ ++G +D +Y + T M + D W
Sbjct: 335 IAALRHGDLLHARVEK-LGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWN 392
Query: 307 TLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLYSSVGDWEKVKELREFMNE- 364
++ + H LG++ ++ ++ A+E +YV + + S+ VKE ++N
Sbjct: 393 AMICG---YSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHL 449
Query: 365 -KGLQTTPG 372
+ + PG
Sbjct: 450 MRNFKIEPG 458
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+ +L+ LY + A LFD +P R+ V+WNVL++ Y+ + L LF N+ ++
Sbjct: 53 LNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQN 112
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
C P++ L AC+H G ++ G + H + + G + ++L+ MYS+C + +A
Sbjct: 113 AC-PNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELA 171
Query: 188 FEVFKGMPEK---DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
+V +P + D+ S++++++ L +G G +A+E M V D T+ GV+ C
Sbjct: 172 LQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLC 231
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
+ + G+ R+ + G++ + ++D+ G+ G + A + + + + +
Sbjct: 232 AQIRDLQLGLRVHARLLRG-GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNR-NVVV 289
Query: 305 WRTLLGA 311
W L+ A
Sbjct: 290 WTALMTA 296
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 143 CAHLGALEFGEKIH------RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
CA + L FG+ +H S H + S +N SL+ +Y KCG LG+A +F MP
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLN---SLVHLYVKCGQLGLARNLFDAMPL 78
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++VVSW+ +++G G+ + + F M P++ FT LSACSH G V EGM
Sbjct: 79 RNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQ 138
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ K FG++ + + +V + R ++ A Q++ ++
Sbjct: 139 CHGLLFK-FGLVCHQYVKSALVHMYSRCSHVELALQVLDTV 178
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 313/544 (57%), Gaps = 39/544 (7%)
Query: 1 MVRAYSMSSSPEE---GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
++RA + SP + ++ +MR + + F + L G + HA++L
Sbjct: 29 IIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQIL 88
Query: 58 RDGYQLDSQLMTTLMDLYST----------FEKSFE---------------------ACK 86
G D + T+L+++YS+ F++S A K
Sbjct: 89 LFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARK 148
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN---REESGCKPDDVTCLLVLQAC 143
LFDE+P+R+ ++W+ LI+ Y+ + ++AL LF + E P+ T VL AC
Sbjct: 149 LFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSAC 208
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSW 202
LGALE G+ +H YI ++G + L +LI MY+KCGSL A VF + +KDV ++
Sbjct: 209 GRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAY 268
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
SAMI LAM G + + F M + + P+ TF G+L AC H GL+++G + M+
Sbjct: 269 SAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMT 328
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
++FGI P+I HYGC+VDL GR+GL+ +A I SM ++PD IW +LL R+ +
Sbjct: 329 EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTC 388
Query: 322 ERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGV 381
E ++ LIEL SG YVLL N+Y+ G W +VK +R M KG++ PGCS + ++GV
Sbjct: 389 EGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGV 448
Query: 382 VHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKL 441
VHEFVV D S IY ML+EI ++L+ AGYV++ L +L ++K ALSYHSEKL
Sbjct: 449 VHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKL 508
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
AIAF ++ T PGT +R+ KNLRIC DCH K++S +++RE+++RD RFHHF +G CSC
Sbjct: 509 AIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSC 568
Query: 502 NDYW 505
D+W
Sbjct: 569 RDFW 572
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 38/252 (15%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC-KPDDVTCLLVLQACAHLGALEFGE 153
++ WN++I + N R C PD T +L + + L G+
Sbjct: 22 ESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQ 81
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV----------------------- 190
+ H I G + SL+ MYS CG L A +
Sbjct: 82 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAG 141
Query: 191 --------FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-----RAGVFPDDQTF 237
F MPE++V+SWS +I+G M G ++A++ F MQ V P+ T
Sbjct: 142 LINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTM 201
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+ VLSAC G +++G + K +G+ +I ++D+ + G L++A ++ ++G
Sbjct: 202 STVLSACGRLGALEQGKWVHSYIDK-YGVEIDIVLGTALIDMYAKCGSLERAKRVFDALG 260
Query: 298 VKPDSTIWRTLL 309
K D + ++
Sbjct: 261 SKKDVKAYSAMI 272
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 284/499 (56%), Gaps = 29/499 (5%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
A+ C + + G H VLR+G + + ++++Y K AC++FD + +
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLN-----------------------------REE 126
V+WN LI+ ++RN A +F + +
Sbjct: 407 RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G D VT + V AC +LGAL+ + IH YI + M+L +L+ M+++CG
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQS 526
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A +VF M ++DV +W+A I +AM G+G AIE F M + G+ PD F +L+A SH
Sbjct: 527 AMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSH 586
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
GLV++G M +GI P HYGC+VDLLGRAGLL +A LI SM ++P+ IW
Sbjct: 587 GGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWG 646
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
+LL ACR+HK+V + E + EL + +G +VLL N+Y+S G W+ V ++R + EKG
Sbjct: 647 SLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKG 706
Query: 367 LQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLG 426
PG S+I + G + EF D SHP + I ML EI +L+ GYV ++T+ L ++
Sbjct: 707 AHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVN 766
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
+EK LS HSEKLAIAF +++T G IRVAKNLRIC DCH+FAK++S Y+RE+I+R
Sbjct: 767 EKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVR 826
Query: 487 DRLRFHHFREGRCSCNDYW 505
D RFH F++G CSC DYW
Sbjct: 827 DNNRFHFFQQGFCSCGDYW 845
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 49/349 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEK-MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S + +F + M +P N F F + C K +L G Q+H +++
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMGAVPDN-FTFPFVLSACTKSAALTEGFQVHGAIVKM 168
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G++ D + +L+ Y + ++FD++ +R+ V+W LI Y + ++A+ LF
Sbjct: 169 GFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLF 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
E G +P+ VT + V+ ACA L L+ GE++ I E + N+L+ MY
Sbjct: 229 --FEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG++ A ++F +K++V ++ ++S G R+ + G M + G PD T
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 240 VLSACSH-----------------------------------CGLVDEGMMFLDRMSKDF 264
+SACS CG + DRM
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGA 311
+ N G V R G ++ A+++ ++M PDS + W T++GA
Sbjct: 407 RVSWNSLIAGFV-----RNGDMESAWKIFSAM---PDSDLVSWNTMIGA 447
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTL------MDL 74
+ + PT F K C M L Q+H+++ ++G +T L M
Sbjct: 31 KHRSSPTGSF----------KKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGT 80
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT----RDALCLFDNLNREESGCK 130
+ + E + +A +LF I + + + S IR A+ +F L G
Sbjct: 81 FESLEYAQKALELF--IEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMC--MGAV 136
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD+ T VL AC AL G ++H I + G+ M + NSLI Y +CG + V
Sbjct: 137 PDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRV 196
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
F M E++VVSW+++I G A G ++A+ F M G+ P+ T GV+SAC+
Sbjct: 197 FDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACA 251
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 6/244 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A S +E LF M+ + I + C +L IH + +
Sbjct: 444 MIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD 503
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D L T L+D+++ A ++F+++ +RD AW I A+ LFD
Sbjct: 504 IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFD 563
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ ++ G KPD V + +L A +H G +E G I R + + +G + ++ +
Sbjct: 564 EMLQQ--GIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLG 621
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A + M E + V W ++++ A H I ++ A + + + P+
Sbjct: 622 RAGLLSEALSLINSMQMEPNDVIWGSLLA--ACRVHKNVDIAAYAAERISELDPERTGIH 679
Query: 239 GVLS 242
+LS
Sbjct: 680 VLLS 683
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 108/241 (44%), Gaps = 17/241 (7%)
Query: 139 VLQACAHLG---ALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
++ +C +G +LE+ +K + +I ++G + +SLI +S CG A VF+ +
Sbjct: 71 LISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQL 130
Query: 195 ----PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
D ++ ++S + + + GA+ + G D ++ CG +
Sbjct: 131 MCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEI 190
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRT 307
D D+MS+ N+ + ++ + G +A L M G++P+S
Sbjct: 191 DCMRRVFDKMSER-----NVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVG 245
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDWEKVKELREFMNEKG 366
++ AC + + LGE+V + EL+ + + V L+++Y G +K +++ + +K
Sbjct: 246 VISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKN 305
Query: 367 L 367
L
Sbjct: 306 L 306
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +Y+ + ++ LF++M + + FA + A+ L G +H +R+G
Sbjct: 369 MITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNG 428
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LM++Y EA +FD + +D ++WN LI Y RN +A LF
Sbjct: 429 MEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFT 488
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +P+ VT +L A A L +LE G ++H Y GY + N+LI MY K
Sbjct: 489 EMLLQ---LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVK 545
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L +A +F + K+++SW+ M++G M+G GRDAI F M+ +G+ PD +F+ +
Sbjct: 546 CGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAI 605
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL DEG F D M K+ I P + HY C+VDLL G L +AY+ I SM ++P
Sbjct: 606 LYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEP 665
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS+IW +LL CRIH++V L E V E + EL+ + +G YVLL N+Y+ WE V++L+
Sbjct: 666 DSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKN 725
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ +GL+ GCS I KG VH F+ D+ +HP+ I + L+E+ K+++ G+ +
Sbjct: 726 KIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKY 785
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L G AL HS KLA+AFGVL G IRV KN R+C CH AK +S + +
Sbjct: 786 ALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCS 845
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF +GRCSC YW
Sbjct: 846 REIILRDSNRFHHFEQGRCSCRGYW 870
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 162/369 (43%), Gaps = 10/369 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + EG LF KM + + + S +KC S+ G +H + + G
Sbjct: 167 LMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLG 226
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LM Y+ ++ +A +FD +P RD ++WN +IS N A+ LF
Sbjct: 227 FGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFV 286
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G + D T L VL ACA L L G +H Y + G+ S+ +L N L+ MYS
Sbjct: 287 RMWLE--GEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSN 344
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C ++F+ M +K+VVSW+AMI+ G F M G PD T
Sbjct: 345 CSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSA 404
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L A + L+ G ++ G+ + ++++ + G +++A +LI V
Sbjct: 405 LHAFAGNELLKHGKSVHGYAIRN-GMEKVLAVTNALMEMYVKCGNMEEA-KLIFDGVVSK 462
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL---LNLYSSVGDWEKVKE 357
D W TL+G + L E+ Q + V + L +S+ E+ +E
Sbjct: 463 DMISWNTLIGG---YSRNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSSLERGRE 519
Query: 358 LREFMNEKG 366
+ + +G
Sbjct: 520 MHAYALRRG 528
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 179/396 (45%), Gaps = 51/396 (12%)
Query: 37 IKCCMKFCSLMGGLQIH-----ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI 91
++ C + SL GG + H + + RDG +D+ L L+ +Y A ++FDE+
Sbjct: 98 LQLCSEVRSLEGGKRAHFLVRASSLGRDG--MDNVLGQKLVLMYLKCGDLENARRVFDEM 155
Query: 92 PQ-RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
PQ D W L+S Y + R+ + LF ++ G +PD T VL+ A LG++E
Sbjct: 156 PQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHC--CGVRPDAYTISCVLKCIAGLGSIE 213
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
GE +H + + G+GS+ + N+L+A Y+K A VF GMP +DV+SW++MISG
Sbjct: 214 DGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCT 273
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
NG AIE F M G D T VL AC+ L +FL R+ +
Sbjct: 274 SNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHL-----LFLGRV---------V 319
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
H Y + G + Q + + + + WR+ ++ ++++
Sbjct: 320 HGYSV------KTGFISQTSLANVLLDMYSNCSDWRST-------------NKIFRNMVQ 360
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD- 389
+ + ++ Y+ G ++KV L + M +G T P + +H F ++
Sbjct: 361 ---KNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEG--TRP--DIFAITSALHAFAGNEL 413
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
+ H + Y + + + K L + + E+ + N+
Sbjct: 414 LKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNM 449
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 291/466 (62%), Gaps = 2/466 (0%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C L+ G Q+HA+ L+ + + + + L+D+Y + + +A F+ +P+++ V+W
Sbjct: 219 CASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSW 278
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+++ Y +N+R DAL LF L+ E G +P++ T + L +CA L AL+ G +
Sbjct: 279 TAVMTAYTQNERFEDALQLF--LDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASA 336
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ G+ +++CN+L+ MYSK GS+ A+ VF MP +DVVSW+++I G A +G R+A+
Sbjct: 337 MKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAM 396
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M A + P TF GVL AC+ GLVDEG+ +L+ M K+ GI P HY C+V L
Sbjct: 397 CVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGL 456
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
L RAG LD+A Q I S + D W++LL +C+++K+ LG RV E +++LK + G Y
Sbjct: 457 LCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTY 516
Query: 340 VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY 399
VLL N+Y+ W+ V ++R+ M E+G++ PG S I + VH F +D +H IN+I
Sbjct: 517 VLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQIT 576
Query: 400 QMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVA 459
L E+ Q+K+ GYV LH++ AE+K L YHSEK+A+AFG++ +P G TIR+
Sbjct: 577 IKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIM 636
Query: 460 KNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KNLRIC DCH K++S V R++++RD +RFH +G CSC+DYW
Sbjct: 637 KNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 130/289 (44%), Gaps = 4/289 (1%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
++ N + S A+ S G Q H ++ G Q + ++ +Y
Sbjct: 99 LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAH 158
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
+A K+F+ + D A+N +I+ ++ ++ + ++ E + D V+ + VL
Sbjct: 159 VEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE--QWDHVSYVAVL 216
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
CA L G ++H + + + ++L+ MY KC A F+ +PEK+VV
Sbjct: 217 GHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVV 276
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW+A+++ N DA++ F ++ GV P++ T+ L++C+ + G L
Sbjct: 277 SWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNA-LSAS 335
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ G + ++++ ++G + A+++ SM + D W +++
Sbjct: 336 AMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWR-DVVSWNSVI 383
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 4/209 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + E+ LF + + + N F + A+ C +L G + A ++ G
Sbjct: 281 VMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTG 340
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LM++YS +A ++F +P RD V+WN +I Y + R+A+C+F
Sbjct: 341 HWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFH 400
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ E P VT + VL ACA LG ++ G ++ + E G ++ +
Sbjct: 401 DMLLAE--IVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLC 458
Query: 180 KCGSLGMAFE-VFKGMPEKDVVSWSAMIS 207
+ G L A + + DVV+W +++S
Sbjct: 459 RAGRLDEAEQFILSNCIGTDVVAWKSLLS 487
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
L G IHA+++R + D L+ Y + A ++FD +P R+ V+ N+L+S
Sbjct: 27 LCTGKAIHAQMIRAAH-FDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSG 85
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y R DAL L + + ++ L A AH+ + G + H Y + G
Sbjct: 86 YASAGRHSDALALL-----KAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQ 140
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+CN+++ MY +C + A +VF+ + D+ ++++MI+G G +I +M
Sbjct: 141 EHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSM 200
Query: 226 QRAGVFPDDQTFTGVLSACS 245
D ++ VL C+
Sbjct: 201 VGEVEQWDHVSYVAVLGHCA 220
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N LIA Y KCG LG+A ++F MP ++ VS + ++SG A G DA+ A+ +A F
Sbjct: 49 NHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDAL----ALLKAADF 104
Query: 232 P-DDQTFTGVLSACSH 246
++ + LSA +H
Sbjct: 105 SLNEYVLSTALSAAAH 120
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 285/508 (56%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ AY++ +E LF +MR R+ N + C L G +IHA +
Sbjct: 57 MIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMAS 116
Query: 60 GYQLDSQ--LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G S L L+++Y EA K+FD + D +W +I+ N +AL
Sbjct: 117 GELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALE 176
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF +N E G P VT VL ACA GAL+ G++IH + G+ S + +L+ M
Sbjct: 177 LFHRMNLE--GIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDM 234
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCGSL + +VF M ++ VSW+AMI+ LA +G G +A+E F M G+ D TF
Sbjct: 235 YAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTF 294
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VL ACSH GL+ E + F M +D+ I P HY +D +GRAG L A +LI SM
Sbjct: 295 ICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMP 354
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
P++ W+TLL ACRIH +V E L +L ++S Y LL N+Y++ G +
Sbjct: 355 FHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMR 414
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ M ++GL+ PG S I +K VHEFV D +HP +EI L+++ +++ AGYV
Sbjct: 415 VRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPN 474
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
LH + EEK + HSEKLAIAFG++ATPPGT + + KNLR+C DCH KV++
Sbjct: 475 TKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAK 534
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R +++RD RFHHF +G+CSC DYW
Sbjct: 535 IMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+E G +IH +S G+ N L++MY+KCG L A +F G+ E+ VVSWSAMI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 209 LAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEG------MMFLDRMS 261
A++G G++A+ F M+ G V P+ TFTGV +AC +++G M +
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
IL N ++++ R G L++A ++ +M PD+ W +++ AC
Sbjct: 121 SSNAILEN-----ALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 302/511 (59%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + LF++M ++ + + F + + L GGLQ H ++++ G
Sbjct: 211 MIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTG 270
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCYIRNQR-TRDALCL 118
+ +S + + L+DLYS C K+F+EI + D V WN ++S Y +N+ DAL
Sbjct: 271 FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAM 177
F + + G +P+D + + V+ AC++L + G++IH + S ++++ N+LIAM
Sbjct: 331 FRQM--QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAM 388
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YSKCG+L A +F M E + VS ++MI+G A +G +++ F M + P TF
Sbjct: 389 YSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITF 448
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VLSAC+H G V+EG + + M + F I P HY C++DLLGRAG L +A LI M
Sbjct: 449 ISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP 508
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
P S W +LLGACR H ++ L + +++L+ + YV+L N+Y+S G WE+V
Sbjct: 509 FNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVAT 568
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+FM ++G++ PGCS I +K +H FV +D SHP I EIY+ L+E++ ++K AGYV +
Sbjct: 569 VRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
Query: 418 ITSEL---HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ L EK L +HSEKLA+AFG+++T G + V KNLRIC DCHN K
Sbjct: 629 VRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKF 688
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + RE+ +RD RFH F+EG+CSC DYW
Sbjct: 689 ISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 9/257 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ LF MR+ + + F S I C L+G Q+H+ + G
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIG--QLHSVAVSSG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
+ + L+ Y +A ++F + RD V+WN +I Y ++Q AL LF
Sbjct: 169 FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLF 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G D T VL A L L G + H + + G+ ++ + LI +YS
Sbjct: 229 QEMVRR--GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYS 286
Query: 180 KCGSLGMA--FEVFKGMPEKDVVSWSAMISGLAMNGHG-RDAIESFGAMQRAGVFPDDQT 236
KCG GM+ +VF+ + E D+V W+ M+SG + N DA+E F MQ G P+D +
Sbjct: 287 KCGG-GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCS 345
Query: 237 FTGVLSACSHCGLVDEG 253
F V+SACS+ +G
Sbjct: 346 FVCVISACSNLSSPSQG 362
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
++ Y+ + A +LFD+IP+ D V++N LIS Y T AL LF + E
Sbjct: 77 FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGM--REM 134
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G D T V+ AC L G+ +H G+ S +++ N+L+ Y K G L A
Sbjct: 135 GLDMDXFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192
Query: 188 FEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
VF GM +D VSW++MI + G A+ F M R G+ D T VL+A +
Sbjct: 193 KRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC 252
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR--AGLLD--QAYQLITSMGVKPDS 302
+ G+ F ++ K G N H ++DL + G+ D + ++ IT +PD
Sbjct: 253 LEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT----EPDL 307
Query: 303 TIWRTLL 309
+W T++
Sbjct: 308 VLWNTMV 314
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N++IA Y+K +A ++F +PE D+VS++ +IS A G A+ F M+ G+
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 232 PDDQTFTGVLSA-CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T + V++A C GL+ G + +S F ++++ ++ G+ G LD A
Sbjct: 138 MDXFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNN--ALLTYYGKNGDLDDAK 193
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHK 316
++ MG D W +++ A H+
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQ 219
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/519 (38%), Positives = 309/519 (59%), Gaps = 17/519 (3%)
Query: 1 MVRAYSMSSSPE------EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHA 54
++R Y+ S++ E + M +K + +K C SL G Q+HA
Sbjct: 96 LIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQVHA 155
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
VL+ G++ D+ + +L+ Y+T A K+F ++ +R+ V+WN++I Y +
Sbjct: 156 HVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDT 215
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN--LCN 172
AL +F + R PD T V+ ACA LGAL G +H YI + + ++ L N
Sbjct: 216 ALRMFGEMQRVHD---PDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVN 272
Query: 173 S-LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GV 230
+ L+ MY K G L +A +VF+ M +D+ +W++MI GLAM+G + A+ + M + +
Sbjct: 273 TCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKI 332
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P+ TF GVLSAC+H G+VDEG++ D M+K++ + P + HYGC+VDL RAG +++A
Sbjct: 333 VPNSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEAL 392
Query: 291 QLITSMGVKPDSTIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQ--ESGDYVLLLNLYS 347
L++ M +KPD+ IWR+LL AC + + V L E + + + E + SG YVLL +Y+
Sbjct: 393 NLVSEMSIKPDAVIWRSLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYA 452
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
S W V LR+ M+EKG+ PGCS I + GVVHEF D +HP+ IY+++ EI +
Sbjct: 453 SACRWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEE 512
Query: 408 QLKIAGYVAEIT-SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICV 466
+L+ GY+ + + + + + + K N L HSE+LAIAFG+L + P IRV KNLR+C
Sbjct: 513 KLESIGYLPDYSGAPMVDEVNDGKLNTLRLHSERLAIAFGILNSKPDVPIRVFKNLRVCN 572
Query: 467 DCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH K++S +YN E+I+RDR RFHHF++G CSC DYW
Sbjct: 573 DCHRVTKLISRIYNVEIIVRDRARFHHFKDGTCSCMDYW 611
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 13/276 (4%)
Query: 51 QIHARVLR---DGYQLDSQLMTTLMDLYSTFEKS--FEACKLFDEIPQRDTVAWNVLISC 105
QIHA+ LR + L T ++ YS+ + A ++F P ++ WN LI
Sbjct: 40 QIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMWNTLIRV 99
Query: 106 YIRNQRTR---DALCLFDN-LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
Y R+ T A+ L+ + EE PD+ T +VL+ACA+ +L G+++H ++ +
Sbjct: 100 YARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQVHAHVLK 159
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
HG+ S +CNSL+ Y+ CG L +A ++F M E++ VSW+ MI A G A+
Sbjct: 160 HGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRM 219
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK--DFGILPNIHHYGCVVDL 279
FG MQR PD T V+SAC+ G + G+ + K D ++ ++ C+VD+
Sbjct: 220 FGEMQRVHD-PDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCLVDM 278
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++G L+ A Q+ SM + D W +++ +H
Sbjct: 279 YCKSGELEIAKQVFESMAFR-DLNAWNSMILGLAMH 313
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 302/511 (59%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + LF++M ++ + + F + + L GGLQ H ++++ G
Sbjct: 211 MIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTG 270
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCYIRNQR-TRDALCL 118
+ +S + + L+DLYS C K+F+EI + D V WN ++S Y +N+ DAL
Sbjct: 271 FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAM 177
F + + G +P+D + + V+ AC++L + G++IH + S ++++ N+LIAM
Sbjct: 331 FRQM--QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAM 388
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YSKCG+L A +F M E + VS ++MI+G A +G +++ F M + P TF
Sbjct: 389 YSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITF 448
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VLSAC+H G V+EG + + M + F I P HY C++DLLGRAG L +A LI M
Sbjct: 449 ISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP 508
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
P S W +LLGACR H ++ L + +++L+ + YV+L N+Y+S G WE+V
Sbjct: 509 FNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVAT 568
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+FM ++G++ PGCS I +K +H FV +D SHP I EIY+ L+E++ ++K AGYV +
Sbjct: 569 VRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
Query: 418 ITSEL---HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ L EK L +HSEKLA+AFG+++T G + V KNLRIC DCHN K
Sbjct: 629 VRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKF 688
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + RE+ +RD RFH F+EG+CSC DYW
Sbjct: 689 ISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 9/257 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ LF MR+ + + F S I C L+G Q+H+ + G
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
+ + L+ Y +A ++F + RD V+WN +I Y ++Q AL LF
Sbjct: 169 FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLF 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R G D T VL A L L G + H + + G+ ++ + LI +YS
Sbjct: 229 QEMVRR--GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYS 286
Query: 180 KCGSLGMA--FEVFKGMPEKDVVSWSAMISGLAMNGHG-RDAIESFGAMQRAGVFPDDQT 236
KCG GM+ +VF+ + E D+V W+ M+SG + N DA+E F MQ G P+D +
Sbjct: 287 KCGG-GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCS 345
Query: 237 FTGVLSACSHCGLVDEG 253
F V+SACS+ +G
Sbjct: 346 FVCVISACSNLSSPSQG 362
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
++ Y+ + A +LFD+IP+ D V++N LIS Y T AL LF + E
Sbjct: 77 FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGM--REM 134
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G D T V+ AC L G+ +H G+ S +++ N+L+ Y K G L A
Sbjct: 135 GLDMDGFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192
Query: 188 FEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
VF GM +D VSW++MI + G A+ F M R G+ D T VL+A +
Sbjct: 193 KRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC 252
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR--AGLLD--QAYQLITSMGVKPDS 302
+ G+ F ++ K G N H ++DL + G+ D + ++ IT +PD
Sbjct: 253 LEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT----EPDL 307
Query: 303 TIWRTLL 309
+W T++
Sbjct: 308 VLWNTMV 314
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N++IA Y+K +A ++F +PE D+VS++ +IS A G A+ F M+ G+
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 232 PDDQTFTGVLSA-CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T + V++A C GL+ G + +S F ++++ ++ G+ G LD A
Sbjct: 138 MDGFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNN--ALLTYYGKNGDLDDAK 193
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHK 316
++ MG D W +++ A H+
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQ 219
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 298/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS S E LF +M + N F + + C S+ Q+H+ V++
Sbjct: 113 MISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTN 172
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++L+D+Y EA K+FD +P+RDTV+ +IS Y + +AL LF
Sbjct: 173 FESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFR 232
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L SG + + VT +L + + L +L +G+++H I + L NSLI MYSK
Sbjct: 233 QLY--SSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSK 290
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L + VF MP++ +SW+AM+ G +G G++ ++ F M V PD T V
Sbjct: 291 CGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAV 349
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CSH GLVDEG+ D + K+ + +I HYGCV+DLLGR+G L +A LI M +P
Sbjct: 350 LSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEP 409
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW +LLGACR+H +V++GE V + L++++ +G+YV+L N+Y++ G W+ V +R+
Sbjct: 410 TPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRK 469
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E + P S I L V+H F + HPR +I + E+ +K AG+V +++
Sbjct: 470 LMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSC 529
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSEKLAI FG++ TPPG TI+V KNLRICVDCHNFAK +S VY
Sbjct: 530 VLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYG 589
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD+ RFH ++G C+C DYW
Sbjct: 590 REISLRDKNRFHLLKDGACTCGDYW 614
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 176/373 (47%), Gaps = 43/373 (11%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
AI C++ +L G Q+HA +++ Y+ L T L+ LY +A + D +P+R+
Sbjct: 47 AITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERN 106
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V+W +IS Y ++ R +AL LF + R +GCK ++ T VL +C +++ E++
Sbjct: 107 VVSWTAMISGYSQSGRHAEALELFIRMLR--AGCKANEFTLATVLTSCPVHQSIQQVEQV 164
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + + S M + +SL+ MY K G++ A +VF +PE+D VS +A+ISG A G
Sbjct: 165 HSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLD 224
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM----MFLDRMSKDFGILPN-- 269
+A++ F + +G+ + TFT +L++ S ++ G + L + F +L N
Sbjct: 225 DEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSL 284
Query: 270 IHHYGCVVDLL------------------------GRAGLLDQAYQLITSMG--VKPDST 303
I Y LL GR G+ + QL +M VKPDS
Sbjct: 285 IDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSV 344
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQES----GDYVLLLNLYSSVGDWEKVKELR 359
+L C V G + + ++ K Q + G Y +++L G +K +L
Sbjct: 345 TLLAVLSGCSHGGLVDEGLDIFDLIV--KEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402
Query: 360 EFMNEKGLQTTPG 372
E M + TP
Sbjct: 403 EHMP---FEPTPA 412
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 290/506 (57%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF ++ N I + F L I L+ G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L + T L +Y + A +LFDE P++ +WN +IS Y +N T A+ LF
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + S P+ VT +L ACA LGAL G+ +H I S + + +L+ MY+K
Sbjct: 406 EMMPQLS---PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAK 462
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A ++F M +K+VV+W+AMI+G ++GHG++A++ F M ++G+ P TF +
Sbjct: 463 CGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSI 522
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV EG M+ ++G P HY C+VD+LGRAG L A + I M ++P
Sbjct: 523 LYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEP 582
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+W LLGAC IHK+ + + L +L + G YVLL N+YS+ ++ K +R+
Sbjct: 583 GPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ 642
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE-IT 419
+ ++ L TPGC+ I + + F D SHP+ I++ML+++ +++ AGY AE +T
Sbjct: 643 VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVT 702
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ LH++ EEK ++ HSEKLAIAFG+++T PGT IR+ KNLR+C+DCH K +S +
Sbjct: 703 TALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKIT 762
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF+ G CSC DYW
Sbjct: 763 ERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 183/408 (44%), Gaps = 46/408 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S + P+ +L+ +R+ + + F +FAI + G+ +HA + D
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + + ++DLY F ++ A K+FD +P+RDTV WN +IS + RN D++ +F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + G D T VL A A L G I S+ G S + + LI++YS
Sbjct: 203 --VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYS 260
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG +F + + D++S++AMISG N A+ F + +G + T G
Sbjct: 261 KCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVG 320
Query: 240 VLSA---CSHCGLVDEGMMFLDRMSKDFGIL--PNIH----------------------- 271
++ +H L + +S GI+ P++
Sbjct: 321 LIPVYLPFNHLQLSR----LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDES 376
Query: 272 ------HYGCVVDLLGRAGLLDQAYQLITSM--GVKPDSTIWRTLLGACRIHKHVTLGER 323
+ ++ + GL D+A L M + P+ ++L AC +++G+
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436
Query: 324 VIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT 369
V LI+ + ES YV L+++Y+ G + ++L + M +K + T
Sbjct: 437 V-HGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQI A+++ G D +T L + +LF+++ + D +NVLI + N
Sbjct: 31 LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ ++ L+ +L R+ + +PD+ T + A + L G +H + G S +
Sbjct: 91 GLPKSSIFLYTHL-RKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++++ +Y K +A +VF MPE+D V W+ MISG + N + D+I F M G
Sbjct: 150 VGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG 209
Query: 230 VFPDDQTFTGVLSACS 245
+ D T VL+A +
Sbjct: 210 LSFDSTTLATVLTAVA 225
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/430 (42%), Positives = 267/430 (62%), Gaps = 3/430 (0%)
Query: 76 STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVT 135
+T + ++F ++ ++ ++WNV+I+ Y+ N ++A+ L+ + E +G +PD V+
Sbjct: 234 TTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQM--EANGVEPDVVS 291
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ VL A L AL G ++H++ + L N+LI MY+KCG L A VF M
Sbjct: 292 IVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQ 351
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+DVVSW+++IS G GRDA+ F M+ +G+ PD F VL+ACSH GL+D+G
Sbjct: 352 FRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRY 411
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + M+ + GI P + H+ CVVDLLGRAG +D+AY I M ++PD +W LL ACR++
Sbjct: 412 YFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVY 470
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
++ +G + L+ L + SG YVLL N+Y+ G W V +R M KG++ PG S
Sbjct: 471 SNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISN 530
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
+ L VH F+ D SHP+ +IY+ LD + ++K GY+ E S LH++ E+K L+
Sbjct: 531 VELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLA 590
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLA+AF ++ T PGT IRV KNLR+C DCH AK++S + RE+IIRD RFHHF+
Sbjct: 591 VHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQ 650
Query: 496 EGRCSCNDYW 505
EG CSC DYW
Sbjct: 651 EGCCSCGDYW 660
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 143/278 (51%), Gaps = 9/278 (3%)
Query: 51 QIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
++H +VL D Y + + + LM +Y+ + A +FDEI ++ V +NV+I Y+ N
Sbjct: 39 KLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNN 98
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+DAL ++ + + G PD T VL+A + +L G +IH + + G +
Sbjct: 99 HLYKDALLVYKTMYTQ--GFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLY 156
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N LIAMY KC SL A +V +P +DVVSW++M+S A NG DA+E M+
Sbjct: 157 VGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALN 216
Query: 230 VFPDDQTFTGVLSACSHC---GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+ P+D T +L A ++ ++ MFL +++K I N+ V + + + ++
Sbjct: 217 LKPNDCTMASLLPAVTNTTSDNVLYVKEMFL-KLTKKSVISWNVMIAMYVNNSMPKEAVV 275
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
Y + + GV+PD ++L A ++LG RV
Sbjct: 276 --LYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRV 311
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 37/311 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + ++ +++ M + + + +K + SL GLQIH VL+ G
Sbjct: 91 MIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIG 150
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + L+ +Y + EA ++ DEIP RD V+WN ++S Y +N R DAL L
Sbjct: 151 LDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCR 210
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E KP+D T +L A + S +Y K
Sbjct: 211 EM--EALNLKPNDCTMASLLPAVTN-------------------------TTSDNVLYVK 243
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
E+F + +K V+SW+ MI+ N ++A+ + M+ GV PD + V
Sbjct: 244 --------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSV 295
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L A + G + + ++ +LPN+ ++D+ + G L A + M +
Sbjct: 296 LPAYGDLSALSLGRR-VHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR- 353
Query: 301 DSTIWRTLLGA 311
D W +++ A
Sbjct: 354 DVVSWTSIISA 364
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +S P+E L+ +M + + + + +L G ++H R
Sbjct: 260 MIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKK 319
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L+D+Y+ +A +F+++ RD V+W +IS Y + + RDA+ +F
Sbjct: 320 LLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFA 379
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG PD + + VL AC+H G L+ G ++E G K+ ++ + +
Sbjct: 380 EM--RNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGR 437
Query: 181 CGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
G + A+ + MP E D W ++S
Sbjct: 438 AGKIDEAYGFIRQMPLEPDERVWGPLLSA 466
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 290/506 (57%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF ++ N I + F L I L+ G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L + T L +Y + A +LFDE P++ +WN +IS Y +N T A+ LF
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + S P+ VT +L ACA LGAL G+ +H I S + + +L+ MY+K
Sbjct: 406 EMMPQLS---PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAK 462
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A ++F M +K+VV+W+AMI+G ++GHG++A++ F M ++G+ P TF +
Sbjct: 463 CGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSI 522
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GLV EG M+ ++G P HY C+VD+LGRAG L A + I M ++P
Sbjct: 523 LYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEP 582
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+W LLGAC IHK+ + + L +L + G YVLL N+YS+ ++ K +R+
Sbjct: 583 GPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQ 642
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE-IT 419
+ ++ L TPGC+ I + + F D SHP+ I++ML+++ +++ AGY AE +T
Sbjct: 643 VVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVT 702
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+ LH++ EEK ++ HSEKLAIAFG+++T PGT IR+ KNLR+C+DCH K +S +
Sbjct: 703 TALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKIT 762
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF+ G CSC DYW
Sbjct: 763 ERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 46/408 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R +S + P+ +L+ +R+K + + F +FAI + G+ +HA + D
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + + ++DLY F ++ A K+FD +P+RDTV WN +IS + RN D++ +F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + G D T VL A A L G I S+ G S + + LI++YS
Sbjct: 203 --VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYS 260
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG +F + + D++S++AMISG N A+ F + +G + T G
Sbjct: 261 KCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVG 320
Query: 240 VLSA---CSHCGLVDEGMMFLDRMSKDFGIL--PNIH----------------------- 271
++ +H L + +S GI+ P++
Sbjct: 321 LIPVYLPFNHLQLSR----LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDES 376
Query: 272 ------HYGCVVDLLGRAGLLDQAYQLITSM--GVKPDSTIWRTLLGACRIHKHVTLGER 323
+ ++ + GL D+A L M + P+ ++L AC +++G+
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436
Query: 324 VIEHLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT 369
V LI+ + ES YV L+++Y+ G + ++L + M +K + T
Sbjct: 437 V-HGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQI A+++ G D +T L + +LF+++ + D +NVLI + N
Sbjct: 31 LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ ++ L+ +L R+++ +PD+ T + A + L G +H + G S +
Sbjct: 91 GLPKSSIFLYTHL-RKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++++ +Y K +A +VF MPE+D V W+ MISG + N + D+I F M G
Sbjct: 150 VGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG 209
Query: 230 VFPDDQTFTGVLSACS 245
+ D T VL+A +
Sbjct: 210 LSFDSTTLATVLTAVA 225
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 312/577 (54%), Gaps = 75/577 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+RAY+ + E L+ M++ + N F F +K C + G +H +V+R
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 59 ----------------------DGYQLDSQLM-------TTLMDLYSTFEKSFEACKLF- 88
D +++ +++ T ++ LY E+ +A LF
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 89 --------------------------------------DEIPQRDTVAWNVLISCYIRNQ 110
D + +R+ ++WN ++S Y +N
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNG 282
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R DAL LF+ + E C P+ VT L+++ AC++LG+ G K+H ++ L
Sbjct: 283 RPTDALSLFNQMQASE--CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTL 340
Query: 171 CNSLIAMYSKCGSLGMAFEVFKG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
N+++ MY KCG L A E+F + E+DV SW+ +ISG ++GHG++A+E F MQ
Sbjct: 341 RNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVE 400
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
GV P+D TFT +LSACSH GL+DEG M+K + P + HY C+VD+LGRAG L++
Sbjct: 401 GVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNE 459
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A++LI + +P +W LL ACRIH + LGE +L +L+ + +G YVL+ N+Y++
Sbjct: 460 AFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAA 519
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W++V+ +R+ M +GL+ S I VH F D S P E+Y+ ++ + +
Sbjct: 520 SNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIE 579
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K+ GYV +++ LH++ E+K + L+YHSEKLA+AFG++ G I+V KNLR+C DC
Sbjct: 580 MKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDC 639
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K +S +Y R++I+RD RFHHF+ GRCSC DYW
Sbjct: 640 HWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 297/495 (60%), Gaps = 3/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF +++ R F + + +L G QIH++ + + + +L
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ +K EA ++F ++ + +V W LIS Y++ D L LF ++R + G
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGA-- 440
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T +L+ACA+L +L G+++H I G S + ++L+ MY+KCGS+ A ++F
Sbjct: 441 DSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMF 500
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ MP ++ VSW+A+IS A NG G A+ SF M +G+ P+ +F +L ACSHCGLV+
Sbjct: 501 QEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVE 560
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG+ + + M++ + + P HY +VD+L R+G D+A +L+ M +PD +W ++L +
Sbjct: 561 EGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNS 620
Query: 312 CRIHKHVTLGERVIEHLIELKA-QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
CRIHK+ L + + L +K +++ YV + N+Y++ G+W+ V ++++ + E+G++
Sbjct: 621 CRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKV 680
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
P S + +K H F +D SHP+ EI + LDE+ KQ++ GY + T LHN+ E K
Sbjct: 681 PAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVK 740
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+L YHSE++AIAF +++TP G+ I V KNLR C DCH KV+S + NRE+ +RD R
Sbjct: 741 VESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSR 800
Query: 491 FHHFREGRCSCNDYW 505
FHHF +G CSC DYW
Sbjct: 801 FHHFTDGSCSCKDYW 815
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 4/311 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS + LF KM+ + F + + ++ + G Q+H+ V++
Sbjct: 211 LLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCN 270
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+D YS ++ EA KLF E+P+ D +++NVLI+C N R ++L LF
Sbjct: 271 FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFR 330
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + LL + A + LE G +IH S++ + NSL+ MY+K
Sbjct: 331 ELQFTRFDRRQFPFATLLSIAANSL--NLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAK 388
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C G A +F + + V W+A+ISG G D ++ F M RA + D T+ +
Sbjct: 389 CDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASI 448
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC++ + G R+ + G L N+ +VD+ + G + +A Q+ M V+
Sbjct: 449 LRACANLASLTLGKQLHSRIIRS-GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVR- 506
Query: 301 DSTIWRTLLGA 311
+S W L+ A
Sbjct: 507 NSVSWNALISA 517
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD + QR V W +LI Y ++ R +A LF ++ R G PD +T +L
Sbjct: 92 ARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRH--GMVPDHITLATLLSGF 149
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
++ ++H ++ + GY S + +CNSL+ Y K SLG+A +FK M EKD V+++
Sbjct: 150 TEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFN 209
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A+++G + G DAI F MQ G P + TF VL+A
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 6/228 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E F LF M + + + + + +F S+ Q+H V++ G
Sbjct: 110 LIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVG 169
Query: 61 YQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
Y DS LM +L+D Y AC LF + ++D V +N L++ Y + DA+ L
Sbjct: 170 Y--DSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINL 227
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F ++ G +P + T VL A + +EFG+++H ++ + + + + N+L+ Y
Sbjct: 228 F--FKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFY 285
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
SK + A ++F MPE D +S++ +I+ A NG +++E F +Q
Sbjct: 286 SKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQ 333
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
++G P+ TC Q HL + G R + + + N++I Y K G+L
Sbjct: 35 KTGFDPN--TCRFNFQVQTHLQRGDLGAA--RKLFDEMPHKNVISTNTMIMGYLKSGNLS 90
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +F M ++ VV+W+ +I G A + +A F M R G+ PD T +LS +
Sbjct: 91 TARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFT 150
Query: 246 HCGLVDE 252
V+E
Sbjct: 151 EFESVNE 157
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/508 (39%), Positives = 291/508 (57%), Gaps = 33/508 (6%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
F F +K C + G +H + LR G + D + +L+D+Y +A KLFD+
Sbjct: 182 FTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDK 241
Query: 91 IPQRDTVAWNVLISCYIR-------------------------------NQRTRDALCLF 119
+ RD +WN LI+ Y++ N AL LF
Sbjct: 242 MIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLF 301
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
D + ++ S KP+ VT + VL ACA ALE G +IH + + G ++ +L MY+
Sbjct: 302 DEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYA 361
Query: 180 KCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
KC SL A F + + K++++W+ MI+ A +G G +A+ F M RAGV PD TF
Sbjct: 362 KCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTF 421
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+LS CSH GL+D G+ + M + P + HY CVVDLLGRAG L +A +LI+ M
Sbjct: 422 MGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMP 481
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++ ++W LL ACR H+++ + E L L+ SG+YVLL NLY+ G WE+VK+
Sbjct: 482 MQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKK 541
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR + +G++ +PGCS I + G H F+ D SHP+ EIY+ L+ + +++K+AGY+ +
Sbjct: 542 LRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPD 601
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ LH++ EEK L+ HSEKLAIAFG+L T PG +RV KNLRIC DCH K +S
Sbjct: 602 TSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISK 661
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE+I+RD RFH F++G CSC DYW
Sbjct: 662 IYEREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q HA+++ G Q ++ L ++ +Y++ A +FD I ++ +N +I Y R
Sbjct: 96 GQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTR 155
Query: 109 NQRTRDALCLFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ + R G D+ T VL++CA L + G +H G
Sbjct: 156 HGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGD 215
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ SLI MY KCG +G A ++F M +D+ SW+A+I+G G A + F M+
Sbjct: 216 FYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEH 275
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+ ++T ++S + G ++ + D M +D
Sbjct: 276 RNIV----SWTAMISGYTQNGFAEQALGLFDEMLQD 307
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 10/240 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + E+ LF++M Q P + + C + +L G +IH
Sbjct: 284 MISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 343
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDAL 116
G L+S + T L +Y+ EA FD I Q ++ +AWN +I+ Y + +A+
Sbjct: 344 IGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 403
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLI 175
+F+N+ R +G +PD VT + +L C+H G ++ G + + H ++ ++
Sbjct: 404 SIFENMLR--AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVV 461
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ + G L A E+ MP + S W A+++ A H I A + + PD+
Sbjct: 462 DLLGRAGRLVEAKELISQMPMQAGPSVWGALLA--ACRSHRNLEIAELAARRLFVLEPDN 519
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 8/231 (3%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
++ G++ H I HG L ++AMY+ G L A VF + + ++++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 209 LAMNG---HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
+G +E++ M G+ D+ T VL +C+ V G + + G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLR-VG 211
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ + + ++D+ + G++ A +L M V+ D W L+ + + E +
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLF 270
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
E ++ + + +++ Y+ G E+ L + M + G + P TI
Sbjct: 271 E---RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTI 318
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/520 (38%), Positives = 292/520 (56%), Gaps = 30/520 (5%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE + ++M+ + N + + ++ + L G + H VLR+G+ D + T+L
Sbjct: 893 EEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 952
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y A +FD + R+ AWN L+S Y DAL L + + +E G KP
Sbjct: 953 IDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE--GIKP 1010
Query: 132 D--------------------------DVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
D +TCLL +ACA L L+ G++IH +G+
Sbjct: 1011 DLVTWNGMISGYAMWGCARKAFMPNSASITCLL--RACASLSLLQKGKEIHCLSIRNGFI 1068
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + +LI MYSK SL A +VF+ + K + SW+ MI G A+ G G++AI F M
Sbjct: 1069 EDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEM 1128
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
Q+ GV PD TFT +LSAC + GL+ EG + D M D+ I+P + HY C+VDLLGRAG
Sbjct: 1129 QKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGY 1188
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
LD+A+ LI +M +KPD+TIW LLG+CRIHK++ E ++L +L+ S +Y+L++NL
Sbjct: 1189 LDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNL 1248
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
YS WE + LRE M G++ S I + VH F D+ HP +IY L ++
Sbjct: 1249 YSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQL 1308
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
++K GYV ++ N+ EK L H+EKLAI +G++ G IRV KN RIC
Sbjct: 1309 VSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRIC 1368
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH+ AK +S V RE+ +RD +RFHHFREG+CSCND+W
Sbjct: 1369 SDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 139/271 (51%), Gaps = 3/271 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+F+++ K + + S A+K C + + G++IH +++ G+ LD L LM+ Y
Sbjct: 661 VFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYG 720
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A ++F E+P + + WN I +++++ + + LF + + S K + T
Sbjct: 721 RCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM--QFSFLKAETATI 778
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ VLQAC +GAL ++IH Y+ G S ++LCN LI+MYSK G L +A VF M
Sbjct: 779 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 838
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
++ SW++MIS A G DA F ++ + + PD T+ +LS G +E +
Sbjct: 839 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 898
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
L RM + G PN V+ + G L+
Sbjct: 899 LQRMQGE-GFKPNSSSMTSVLQAISELGFLN 928
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 125/283 (44%), Gaps = 37/283 (13%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S ++G LF KM+ + ++ C K +L QIH V R G D L
Sbjct: 753 SEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSL 812
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ +YS K A ++FD + R+T +WN +IS Y DA LF L E S
Sbjct: 813 CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL--ESS 870
Query: 128 GCKPDDVT--CLL---------------------------------VLQACAHLGALEFG 152
KPD VT CLL VLQA + LG L G
Sbjct: 871 DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMG 930
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
++ H Y+ +G+ + + SLI MY K SL A VF M +++ +W++++SG +
Sbjct: 931 KETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFK 990
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
G DA+ M++ G+ PD T+ G++S + G + M
Sbjct: 991 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM 1033
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P E L M + R N F + +K G Q+HA ++
Sbjct: 29 LIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYN 88
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ E+ A +FD + ++ V+WN LI+ + R L F
Sbjct: 89 WDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFA 148
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G T + A A +GALE G +H ++ + G + N+++ MY+K
Sbjct: 149 EMQR--NGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAK 206
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF M ++D+V+W+ M++ LA G G++A+ F +++ G+ + TF V
Sbjct: 207 SGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSV 266
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M KD+ + P I HY VDLLGRAGLL +A + M ++P
Sbjct: 267 LTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEP 325
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGACR+HK+ +G+ +H+ EL ++G VLL N+Y+S G W +R+
Sbjct: 326 TAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRK 385
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV DD +HP+ +IY+M +EIN ++K AGYV
Sbjct: 386 MMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAH 445
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G +IR+ KN+RIC DCH+ K +S V+
Sbjct: 446 VLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFK 505
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF EG CSC DYW
Sbjct: 506 REIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +FD++P RD V+W LI+ Y +N +A+ L ++ R +P+ T +L+A
Sbjct: 10 DARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRAR--FRPNGFTFTSLLKA 67
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
G GE++H ++ + + + ++L+ MY++C + MA VF + K+ VSW
Sbjct: 68 TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSW 127
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+A+I+G A G + F MQR G T++ + SA + G +++G + K
Sbjct: 128 NALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIK 187
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
G ++ + ++G + A ++ M K D W T+L A LG+
Sbjct: 188 S-GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTAL---AQYGLGK 242
Query: 323 RVIEHLIELK 332
+ H E++
Sbjct: 243 EAVAHFEEIR 252
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCG++ A VF MP +DVVSW+ +I+G A N +AI M RA P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
FT +L A CG G + ++ + +++ ++D+ R +D A + +
Sbjct: 61 FTSLLKATGACGGCSIGEQ-MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG----DYVLLLNLYSSVGDW 352
V + W L+ GE + E++ G Y + + ++ +G
Sbjct: 120 -VSKNEVSWNALIAG---FARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGAL 175
Query: 353 EKVKELREFMNEKGLQTTP--GCSTIGL 378
E+ + + + + G + T G + +G+
Sbjct: 176 EQGRWVHAHLIKSGQKLTAFVGNTMLGM 203
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 305/542 (56%), Gaps = 39/542 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E F LFE+M+ + + + C + ++ I+ ++ +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 61 YQLDSQLMTTLMDLYS-----TFEKSF--------------------------EACKLFD 89
++D+ L+T L+ +Y+ + F +A +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+ ++D V W +IS Y+ + ++AL +F+ + SG KPD V+ V+ ACA+LG L
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC--SGIKPDVVSMFSVISACANLGIL 360
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ + +H I +G S++++ N+LI MY+KCG L +VF+ MP ++VVSWS+MI+ L
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL 420
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+M+G DA+ F M++ V P++ TF GVL CSH GLV+EG M+ ++ I P
Sbjct: 421 SMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK 480
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VDL GRA LL +A ++I SM V + IW +L+ ACRIH + LG+ + ++
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ G VL+ N+Y+ WE V+ +R M EK + G S I G HEF++ D
Sbjct: 541 ELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGD 600
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H + NEIY LDE+ +LK+AGYV + S L ++ EEK + + +HSEKLA+ FG++
Sbjct: 601 KRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMN 660
Query: 450 TPPGT------TIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
IR+ KNLR+C DCH F K++S VY RE+I+RDR RFH ++ G CSC D
Sbjct: 661 EEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRD 720
Query: 504 YW 505
YW
Sbjct: 721 YW 722
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 152/345 (44%), Gaps = 35/345 (10%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R S SS P ++++R + F+ +K K +L G+++H +
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D + T MD+Y++ + A +FDE+ RD V WN +I Y R +A LF+
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ ++S PD++ ++ AC G + + I+ ++ E+ +L +L+ MY+
Sbjct: 203 M--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA 260
Query: 182 GSLGMAFEVFKGMP-------------------------------EKDVVSWSAMISGLA 210
G + MA E F+ M +KD+V W+ MIS
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+ + ++A+ F M +G+ PD + V+SAC++ G++D+ + + G+ +
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESEL 379
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
++++ + G LD + M + + W +++ A +H
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 20/198 (10%)
Query: 175 IAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
I Y + +G + F +P K V SA+ G+ ++G + D
Sbjct: 96 ILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG----------VAFKIATLCD 145
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
TG + + CG ++ D MS ++ + +++ R GL+D+A++L
Sbjct: 146 PFVETGFMDMYASCGRINYARNVFDEMSHR-----DVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 294 TSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDYVLLLNLYSSV 349
M V PD I ++ AC ++ + E LIE + ++ L+ +Y+
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA 260
Query: 350 GDWEKVKELREFMNEKGL 367
G + +E M+ + L
Sbjct: 261 GCMDMAREFFRKMSVRNL 278
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 299/505 (59%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ + E LF++M + + + A+ C + L G ++H ++R G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +M L+ +Y +++ A ++FDE+ + V+WN +I +N + DA+ LF
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E KPD T + ++ A A + IH Y + + +LI MY+K
Sbjct: 519 RMQLEN--VKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 576
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A +F ++ V++W+AMI G +G G+ A+E F M+ +G P++ TF V
Sbjct: 577 CGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSV 636
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG + M +D+G+ P + HYG +VDLLGRAG L +A+ I M ++P
Sbjct: 637 LSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEP 696
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++ +LGAC++HK+V L E + + EL+ +E +VLL N+Y++ W+ V +R
Sbjct: 697 GISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRT 756
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KGLQ TPG S + LK +H F +H + +IY L ++ +++K GYV + T
Sbjct: 757 AMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPD-TD 815
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+H++ + K L+ HSEKLAIA+G++ T PGTTI++ KNLR+C DCHN K++S V
Sbjct: 816 SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTG 875
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G+CSC DYW
Sbjct: 876 REIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 142/276 (51%), Gaps = 3/276 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C L G +HA++ G ++ T L ++Y+ + +A ++FD +P RD
Sbjct: 232 LKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDR 291
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
VAWN L++ Y RN A+ + + +EE G +PD VT + VL ACA AL ++H
Sbjct: 292 VAWNALVAGYARNGLAEAAVGMVVRM-QEEDGERPDAVTLVSVLPACADAQALGACREVH 350
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G+ ++N+ +++ +Y KCG++ A +VF GM +++ VSW+AMI G A NG
Sbjct: 351 AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDAT 410
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+A+ F M GV D + L AC G +DEG + + + G+ N++ +
Sbjct: 411 EALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVR-IGLESNVNVMNAL 469
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ + + D A Q+ +G K + W ++ C
Sbjct: 470 ITMYCKCKRTDLAAQVFDELGYKTRVS-WNAMILGC 504
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
R AL F ++ SG P T +L+ CA L G +H ++ G +
Sbjct: 206 RGALAAFAAMS-PASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAAT 264
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVF 231
+L MY+KC G A VF MP +D V+W+A+++G A NG A+ MQ G
Sbjct: 265 ALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGER 324
Query: 232 PDDQTFTGVLSACSHC---GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
PD T VL AC+ G E F R G ++ ++D+ + G +D
Sbjct: 325 PDAVTLVSVLPACADAQALGACREVHAFAVR----GGFDEQVNVSTAILDVYCKCGAVDS 380
Query: 289 AYQLITSMGVKPDSTIWRTLL 309
A ++ M + +S W ++
Sbjct: 381 ARKVFDGMQDR-NSVSWNAMI 400
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 295/499 (59%), Gaps = 16/499 (3%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD-GYQLDSQLMTTLMDLYSTFE 79
+ K + N F K C L G +HA VL+ D + +L++ Y+ +
Sbjct: 95 LTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYG 154
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-------------TRDALCLFDNLNREE 126
K + LFD+I + D WN +++ Y ++ + +AL LF ++ +
Sbjct: 155 KLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDM--QL 212
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
S KP++VT + ++ AC++LGAL G H Y+ + + +L+ MYSKCG L +
Sbjct: 213 SQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNL 272
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A ++F + ++D ++AMI G A++GHG A+E + M+ + PD T + ACSH
Sbjct: 273 ACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSH 332
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
GLV+EG+ + M G+ P + HYGC++DLLGRAG L +A + + M +KP++ +WR
Sbjct: 333 GGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWR 392
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
+LLGA ++H ++ +GE ++HLIEL+ + SG+YVLL N+Y+S+G W VK +R M + G
Sbjct: 393 SLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHG 452
Query: 367 LQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLG 426
+ PG S + + G +HEF+ D +HP EIY + EIN++L G+ + L ++
Sbjct: 453 VDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVE 512
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
E+K + LSYHSE+LAIAF ++A+ IR+ KNLR+C DCH K++S Y R++I+R
Sbjct: 513 EEDKEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVR 572
Query: 487 DRLRFHHFREGRCSCNDYW 505
DR RFHHF++G CSC DYW
Sbjct: 573 DRNRFHHFKDGSCSCLDYW 591
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E +LF M+ +I N I C +L G H VLR+ +L+ + T L+
Sbjct: 202 EALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALV 261
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+YS AC+LFDE+ RDT +N +I + + AL L+ N+ E+ PD
Sbjct: 262 DMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLED--LVPD 319
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
T ++ + AC+H G +E G +I + HG K+ LI + + G L A E
Sbjct: 320 GATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERL 379
Query: 192 KGMPEK-DVVSWSAMISGLAMNG 213
+ MP K + + W +++ ++G
Sbjct: 380 QDMPMKPNAILWRSLLGAAKLHG 402
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 299/509 (58%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + P F KM+ + + +H ++R G
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447
Query: 61 YQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ ++ ++ ++D+Y+ A K+F+ IP +D ++WN LI+ Y +N +A+ ++
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY 507
Query: 120 DNLNREESGCK---PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+ CK P+ T + +L A AH+GAL+ G KIH + + + + LI
Sbjct: 508 KMMEE----CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 563
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+Y KCG L A +F +P++ V+W+A+IS ++GH ++ FG M GV PD T
Sbjct: 564 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 623
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F +LSACSH G V+EG R+ +++GI P++ HYGC+VDLLGRAG L+ AY I M
Sbjct: 624 FVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM 682
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++PD++IW LLGACRIH ++ LG+ + L E+ ++ G YVLL N+Y++VG WE V
Sbjct: 683 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 742
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R E+GL+ TPG STI + V F + SHP+ EIY+ L + ++K GY+
Sbjct: 743 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIP 802
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ + L ++ +EK + L+ HSE+LAIAFG+++TPP + IR+ KNLR+C DCHN K +S
Sbjct: 803 DYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFIS 862
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ RE+++RD RFHHF++G CSC DYW
Sbjct: 863 RITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 175/373 (46%), Gaps = 7/373 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + + + ++MR + I N + C + + + IH V++ G
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++Y+ F +A K F ++ D V+WN +I+ Y +N A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF- 405
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYS 179
+ + +G +PD +T + + A + +H +I G+ + + N+++ MY+
Sbjct: 406 -VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYA 464
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFT 238
K G L A +VF+ +P KDV+SW+ +I+G A NG +AIE + M+ + P+ T+
Sbjct: 465 KLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 524
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L A +H G + +GM R+ K + ++ C++D+ G+ G L A L +
Sbjct: 525 SILPAYAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP- 582
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVI-EHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ S W ++ IH H ++ E L E + +V LL+ S G E+ K
Sbjct: 583 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 358 LREFMNEKGLQTT 370
M E G++ +
Sbjct: 643 CFRLMQEYGIKPS 655
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 35 FAIKCCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
+ +K C +L+ G +IH + G+Q + + +L+ +YS F + A LFD++P
Sbjct: 219 YTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPF 278
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
RD +WN +IS I+N AL + D + E G K + VT + +L C LG +
Sbjct: 279 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLE--GIKMNFVTVVSILPVCPQLGDISTAM 336
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
IH Y+ +HG + + N+LI MY+K G+L A + F+ M DVVSW+++I+ N
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
A F MQ G PD T + S + + + ++ ++
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
VVD+ + GLLD A+++ + VK D W TL+ + + V + + E K
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515
Query: 334 --QESGDYVLLLNLYSSVG 350
G +V +L Y+ VG
Sbjct: 516 IIPNQGTWVSILPAYAHVG 534
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 175/371 (47%), Gaps = 22/371 (5%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+HA ++ G + T L++LY+ + S C FD+IPQ+D AWN +IS Y+ N
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCT-FDQIPQKDVYAWNSMISAYVHNG 196
Query: 111 RTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+A+ C + L E +PD T VL+AC G L G KIH + + G+ +
Sbjct: 197 HFHEAIGCFYQLLLVSE--IRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 251
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ SLI MYS+ G G+A +F MP +D+ SW+AMISGL NG+ A++ M+ G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ + T +L C G + M+ + K G+ ++ ++++ + G L+ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKH-GLEFDLFVSNALINMYAKFGNLEDA 370
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLY 346
+ M + D W +++ A + + V H +K Q +G D + L++L
Sbjct: 371 RKAFQQMFIT-DVVSWNSIIAAYEQND-----DPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 347 SSVG---DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
S V D + + + F+ +G + + + + D +H ++ EI + D
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH-KVFEIIPVKD 483
Query: 404 EINKQLKIAGY 414
I+ I GY
Sbjct: 484 VISWNTLITGY 494
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 38/247 (15%)
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
F + +H + G + + L+ +Y+ G + ++ F +P+KDV +W++MIS
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 211 MNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACS--------HCGLVDEGMMF----- 256
NGH +AI F + + PD TF VL AC HC G +
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVA 253
Query: 257 --LDRMSKDFGI----------LP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVK 299
L M FG +P ++ + ++ L + G QA ++ M G+K
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313
Query: 300 PDSTIWRTLLGACR----IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ ++L C I + + VI+H +E S L+N+Y+ G+ E
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSN---ALINMYAKFGNLEDA 370
Query: 356 KELREFM 362
++ + M
Sbjct: 371 RKAFQQM 377
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/419 (43%), Positives = 262/419 (62%), Gaps = 3/419 (0%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F ++ ++ ++WNV+I+ Y+ N +A+ L+ L + G +PD V+ VL AC L
Sbjct: 262 MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLY--LQMQVHGVEPDAVSISSVLPACGDL 319
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
A G +IH Y+ + L N+LI MY+KCG L A VF M +DVVSW++MI
Sbjct: 320 SAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMI 379
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
S M+G G+DA+ F M+ +G PD F VL+ACSH GLVDEG + M+ ++GI
Sbjct: 380 SAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGI 438
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P I HY C+VDLLGRAG +D+AY L M ++P+ +W +LL ACR++ + + +
Sbjct: 439 TPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAAD 498
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
HL +L ++SG YVLL N+Y+ G W+ V+ +R MN KG++ PG S + + V+ F+
Sbjct: 499 HLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFL 558
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
D SH + EIY+ L + ++K GY+ E S LH++ E+K L+ HSEKLAI F
Sbjct: 559 AGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFA 618
Query: 447 VLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L T PG+TIR+ KN+R+C DCH K++S + RE+IIRD RFHHFR+G CSC DYW
Sbjct: 619 ILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 19/287 (6%)
Query: 51 QIHARVLRD-GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
++H+++L D + L LM Y+ + +FDEI ++ V +NV+I Y+ N
Sbjct: 56 KLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNN 115
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+DAL +F + + G PD+ T VL+AC+ G L G +IH + + G +
Sbjct: 116 GLYQDALLVFKTMANQ--GFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLY 173
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N L++MY KC L A V MP +D+VSW++M++G A NG DA++ M+
Sbjct: 174 IGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLK 233
Query: 230 VFPDDQTFTGVLSA-----CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
+ PD T +L A C + V + MF+ K ++ + ++ +
Sbjct: 234 LKPDAGTMGSLLPAVTNTSCDNVLYVKD--MFVKLKEK------SLISWNVMIAVYVNNA 285
Query: 285 LLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
+ ++A L M GV+PD+ ++L AC LG R+ E++
Sbjct: 286 MPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYV 332
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 47/316 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHAR 55
M+R+Y + ++ +F+ M Q P N + C +K CS+ G GLQIH
Sbjct: 108 MIRSYVNNGLYQDALLVFKTMANQGFYPDN-----YTYPCVLKACSVSGNLWVGLQIHGA 162
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
V++ G ++ + L+ +Y + A ++ DE+P RD V+WN +++ Y +N R DA
Sbjct: 163 VVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDA 222
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L L + E+ KPD T +L A +
Sbjct: 223 LKLCREM--EDLKLKPDAGTMGSLLPAVTN------------------------------ 250
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
+ C ++ ++F + EK ++SW+ MI+ N +A++ + MQ GV PD
Sbjct: 251 ---TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAV 307
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+ + VL AC G + + + + PN+ ++D+ + G L +A +
Sbjct: 308 SISSVLPACGDLSAAVLGRRIHEYVERK-KLRPNLLLENALIDMYAKCGCLKEARAVFDQ 366
Query: 296 MGVKPDSTIWRTLLGA 311
M + D W +++ A
Sbjct: 367 MMFR-DVVSWTSMISA 381
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/469 (41%), Positives = 278/469 (59%), Gaps = 3/469 (0%)
Query: 39 CCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
C L G IH+ VL G + ++ + T L+++Y EA ++F + ++D V+
Sbjct: 20 CGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEATRVFRGLERKDLVS 79
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREE-SGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
W L+S Y R R+AL LF + G KPD +LQACA L A G HR
Sbjct: 80 WTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHR 139
Query: 158 YISEHGYGSKMNLCN-SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I E GY S + +I MY KCG+L A EVF GM E+D V+W+ +ISG A +GH
Sbjct: 140 RIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSE 199
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+++ F MQ+ G PD + VLS CSH GLV++G F ++K+FG+ P HYGC+
Sbjct: 200 ESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCM 259
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
+DLLGR+G L+ A +I M + + W L AC++H G+R E ++EL+ +
Sbjct: 260 IDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPA 319
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRIN 396
YV L N+Y++ G+W++V +R M GLQ PG S+I + VHEF D SHPR
Sbjct: 320 A-YVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAA 378
Query: 397 EIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTI 456
EIY +L+ + +Q++ +GYV + L N+ E+K L +HSEKLAIAFG+L+TP G+++
Sbjct: 379 EIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSL 438
Query: 457 RVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
R+ KNLR+C DCH AK +S + RE+ +RD RFHHF++G CSC DYW
Sbjct: 439 RIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 300/507 (59%), Gaps = 8/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + EE LF +M++K + N F S + ++ ++HA+V++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTN 423
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ S + T L+D Y K EA K+F I +D VAW+ +++ Y + T A+ +F
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L + G KP++ T +L CA A + G++ H + + S + + ++L+ MY+
Sbjct: 484 ELTK--GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 541
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G++ A EVFK EKD+VSW++MISG A +G A++ F M++ V D TF G
Sbjct: 542 KKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIG 601
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V +AC+H GLV+EG + D M +D I P H C+VDL RAG L++A ++I +M
Sbjct: 602 VFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNP 661
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
STIWRT+L ACR+HK LG E +I +K ++S YVLL N+Y+ GDW++ ++R
Sbjct: 662 AGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVR 721
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ MNE+ ++ PG S I +K + F+ D SHP ++IY L++++ +LK GY + +
Sbjct: 722 KLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTS 781
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ E K L+ HSE+LAIAFG++ATP G+ + + KNLR+C DCH K+++ +
Sbjct: 782 YVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIE 841
Query: 480 NREVIIRDRLRFHHF-REGRCSCNDYW 505
RE+++RD RFHHF +G CSC D+W
Sbjct: 842 EREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 156/343 (45%), Gaps = 18/343 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E +F MR + + + + IK C L Q+H V++ G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + T LM YS +A +LF EI + V+W +IS +++N +A+ LF
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R+ G +P++ T ++L A + E +H + + Y + +L+ Y
Sbjct: 386 SEMKRK--GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYV 439
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + A +VF G+ +KD+V+WSAM++G A G AI+ FG + + G+ P++ TF+
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 240 VLSACSHCGL-VDEGMMFLDRMSKDFGILPNIHHYGCVVDLL----GRAGLLDQAYQLIT 294
+L+ C+ + +G F F I + CV L + G ++ A ++
Sbjct: 500 ILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
K D W +++ H V + + + K + G
Sbjct: 555 RQREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 39/368 (10%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
S +K C + G Q+H + ++ G+ D + T+L+D Y + K+FDE+ +
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
R+ V W LIS Y RN + L LF + E G +P+ T L A G G
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNE--GTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
++H + ++G + + NSLI +Y KCG++ A +F K VV+W++MISG A NG
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVDEGMMF------ 256
+A+ F +M+ V + +F V+ C+ HC +V G +F
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 257 ------------LD--RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVK 299
LD R+ K+ G + N+ + ++ + ++A L + M GV+
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P+ + +L A + + +V++ E + S LL+ Y +G E+ ++
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYE---RSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 360 EFMNEKGL 367
+++K +
Sbjct: 452 SGIDDKDI 459
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 82 FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQ 141
+ A LFD+ P RD ++ L+ + R+ RT++A LF N++R G + D VL+
Sbjct: 44 YNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR--LGMEMDCSIFSSVLK 101
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
A L FG ++H + G+ +++ SL+ Y K + +VF M E++VV+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
W+ +ISG A N + + F MQ G P+ TF L + G+ G+ +
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
K+ G+ I +++L + G + +A L VK T W +++
Sbjct: 222 KN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMI 267
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 298/551 (54%), Gaps = 47/551 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKC--------------------- 39
MV YS E+ LFE+M++++I + S AI
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 40 --------------CMKFCSLMGGLQIHARVLR-------DGYQLDSQLMTTLMDLYSTF 78
C +LM G +IH ++ +G+ ++ ++ L+D+Y+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420
Query: 79 EKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+K A +FD + +RD V W V+I Y ++ AL L + E+ +P+ T
Sbjct: 421 KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 137 LLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
L ACA L AL G++IH Y + + + N LI MY+KCG +G A VF M
Sbjct: 481 SCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMM 540
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
EK+ V+W+++++G M+G+G +A+ F M+R G D T VL ACSH G++D+GM
Sbjct: 541 EKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ +RM DFG+ P HY C+VDLLGRAG L+ A +LI M ++P +W LL CRIH
Sbjct: 601 YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIH 660
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
V LGE + + EL + G Y LL N+Y++ G W+ V +R M KG++ PGCS
Sbjct: 661 GKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSW 720
Query: 376 I-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
+ G+KG F V D +HP EIYQ+L + +++K GYV E LH++ EEK + L
Sbjct: 721 VEGIKGTT-TFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLL 779
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
HSEKLA+A+G+L TP G IR+ KNLR+C DCH +S + + E+I+RD RFHHF
Sbjct: 780 FEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHF 839
Query: 495 REGRCSCNDYW 505
+ G CSC YW
Sbjct: 840 KNGLCSCKGYW 850
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 169/386 (43%), Gaps = 13/386 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+Y + + F M + + F K C + S+ G HA G
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+ +YS +A K+FDE+P D V+WN +I Y + + + AL +F
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G +PDD+T + VL CA +G G++ H + M + N L+ MY+K
Sbjct: 218 KMT-NEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A VF MP KDVVSW+AM++G + G DA+ F MQ + D T++
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL-------- 292
+S + GL E + +M GI PN V+ G L ++
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 293 --ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
+ G ++ + L+ K V + + + L K ++ + +++ YS G
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSL-SPKERDVVTWTVMIGGYSQHG 454
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTI 376
D K EL M E+ QT P TI
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTI 480
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD--VVSWSAMISGLAMNGHGRDAIESFGAM 225
+NL + LI+ Y G L A + + P D V W+++I NG + SF M
Sbjct: 59 LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLM 118
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
PD+ TF V AC V G +S+ G + N+ +V + R G
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGDSS-HALSRVTGFMSNVFVGNALVAMYSRCGS 177
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
L A ++ M V D W +++
Sbjct: 178 LSDARKVFDEMPVW-DVVSWNSII 200
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 263/419 (62%), Gaps = 2/419 (0%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LFD +PQRD+++W+ +I+ Y +N + +AL F + R+ TC L C+++
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTC--ALSTCSNI 193
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
ALE G ++H + + GY + + N+L+AMY KCGS+ A + F+ + EKDVVSW+ MI
Sbjct: 194 AALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMI 253
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
G A +G G +A+ F M+ G+ PDD T VL+ACSH GLVD+G + M++D+GI
Sbjct: 254 HGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGI 313
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ HY C+VDLLGRAG L++A L+ +M +PD+ W LLGA RIH + LGE+ +
Sbjct: 314 TAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQ 373
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
+ E++ SG Y+LL LY++ G W ++R M KG++ PG S + ++ +H F
Sbjct: 374 IIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFK 433
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFG 446
V D SHP ++IY L+E++ +LK GY++ H++ EEK + L YHSEKLA+A+G
Sbjct: 434 VGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYG 493
Query: 447 VLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L P G IRV KNLR+C DCHN K +S + R +I+RD RFH+F G CSC D+W
Sbjct: 494 ILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 8/218 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ YS + EE + F +M++ +R+ + F C A+ C +L G Q+H R+++
Sbjct: 151 MIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTC--ALSTCSNIAALELGRQLHCRLVK 208
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GYQ + L+ +Y EA F EI ++D V+WN +I Y R+ +AL +
Sbjct: 209 AGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTV 268
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAM 177
F+ + + +G +PDD T + VL AC+H G ++ G E + ++G +K+ ++ +
Sbjct: 269 FELM--KTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDL 326
Query: 178 YSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L A + K MP E D +W A++ ++G+
Sbjct: 327 LGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGN 364
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 149/359 (41%), Gaps = 84/359 (23%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD++P+RD +WNV+++ Y+RN+ + A LF+ + D V+ +L
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER------DIVSWNAMLSGY 67
Query: 144 AHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA---FE---------- 189
A G ++ +I ++ ++G N L+A Y + G + A FE
Sbjct: 68 AQNGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAKRLFESKMDWTLVSW 122
Query: 190 -------------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+F MP++D +SWSAMI+G + NG +A+ F MQR + +
Sbjct: 123 NCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSS 182
Query: 237 FTGVLSACS-----------HCGLVDEG------------MMF-----LDRMSKDFG--I 266
FT LS CS HC LV G M+ +D F +
Sbjct: 183 FTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEIL 242
Query: 267 LPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
++ + ++ R G ++A ++L+ + G++PD ++L AC H L ++
Sbjct: 243 EKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAAC---SHAGLVDQ 299
Query: 324 VIEHLIELK-----AQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
E+ + + Y +++L G E+ + L K + P +T G
Sbjct: 300 GSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLM-----KNMPFEPDAATWG 353
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
+I+ Y + +A ++F MPE+D+ SW+ M++G N + A F M +
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIV-- 58
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
++ +LS + G VDE +M GI N G + + + G ++ A +L
Sbjct: 59 --SWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWN----GLLAAYV-QNGRIEDAKRLF 111
Query: 294 TSMGVKPDSTI--WRTLLGA 311
S K D T+ W L+G
Sbjct: 112 ES---KMDWTLVSWNCLMGG 128
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 306/506 (60%), Gaps = 7/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + +++ E+ LF +M ++ + N F +++ K SL+ Q+HA++++
Sbjct: 379 MIGGFVQNNNNEKAVDLFCQMSREGVRPNHF--TYSTVLAGKPSSLLS--QLHAQIIKAY 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + T L+D Y E+ ++F IP +D VAW+ +++ + + + A+ +F
Sbjct: 435 YEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFI 494
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L +E G KP++ T V+ AC+ A +E G++IH + G + + + ++L+ MYS
Sbjct: 495 QLVKE--GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYS 552
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G++ A +VF E+D+VSW++MI+G +G + A+E F MQ G+ DD TF G
Sbjct: 553 KKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIG 612
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+AC+H GLV+EG + + M KD+ I I HY C+VDL RAG+ D+A +I M
Sbjct: 613 VLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFP 672
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
TIWRTLL ACR+H+++ LG+ E L+ L+ ++ YVLL N+++ G+WE+ +R
Sbjct: 673 ASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVR 732
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M+E+ ++ GCS I +K + F+ DVSHP + +Y L+E++ +LK GY +
Sbjct: 733 KLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTN 792
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
H++ E K LS HSE+LAIA+G++A PPG I++ KNLRIC DCHN +++S +
Sbjct: 793 YVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIE 852
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+ G CSC YW
Sbjct: 853 ERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 25/318 (7%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S ++ E +LF+ + + + S A+K C + G Q+H + L+ G+ D
Sbjct: 79 FSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLED 138
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T+L+D+Y E + +FDE+ ++ V+W L+S Y RN + + L + +
Sbjct: 139 VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQM 198
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G P+ T VL A A +E G ++H I ++G+ +CN+LI MY K +
Sbjct: 199 E--GVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
G A VF M +D V+W+ MI G A G + + F M+ AGV F L C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 245 S-----------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
S HCG+V G F ++D + + C +D+A++L
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEF----AQDIRTALMVTYSKC--------SSVDEAFKLF 364
Query: 294 TSMGVKPDSTIWRTLLGA 311
+ + W ++G
Sbjct: 365 SMADAAHNVVTWTAMIGG 382
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + +E +L +M+ + + N F + + + GG+Q+HA ++++G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + L+ +Y E +A +FD + RD+V WN++I Y + +F
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G K L+ C+ L F +++H + ++GY ++ +L+ YSK
Sbjct: 296 RMRL--AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 181 CGSLGMAFEVFK-GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
C S+ AF++F +VV+W+AMI G N + A++ F M R GV P+ T++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413
Query: 240 VLSA 243
VL+
Sbjct: 414 VLAG 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDE P +D +N L+ + RN R+AL LF +L+ SG D +T L+ C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLH--SSGLGVDGLTLSCALKVC 114
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L G ++H + G+ +++ SL+ MY K +F M K+VVSW+
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+++SG A NG + I MQ GV P+ TF VL A + +++ G+ + K+
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G ++ + ++ ++ A + SM V+ DS W ++G
Sbjct: 235 -GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR-DSVTWNIMIGG 280
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P E L M + R N F + +K G Q+HA ++
Sbjct: 132 LIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYN 191
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ E+ A +FD + ++ V+WN LI+ + R L F
Sbjct: 192 WDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFA 251
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G T + A A +GALE G +H ++ + G + N+++ MY+K
Sbjct: 252 EMQR--NGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAK 309
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF M ++D+V+W+ M++ LA G G++A+ F +++ G+ + TF V
Sbjct: 310 SGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSV 369
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M KD+ + P I HY VDLLGRAGLL +A + M ++P
Sbjct: 370 LTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEP 428
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGACR+HK+ +G+ +H+ EL ++G VLL N+Y+S G W +R+
Sbjct: 429 TAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRK 488
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV DD +HP+ +IY+M +EIN ++K AGYV
Sbjct: 489 MMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAH 548
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G +IR+ KN+RIC DCH+ K +S V+
Sbjct: 549 VLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFK 608
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF EG CSC DYW
Sbjct: 609 REIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 150/329 (45%), Gaps = 9/329 (2%)
Query: 6 SMSSSPEE--GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
S SSP G + + + P I C +F +L G IHA + R
Sbjct: 34 SFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAG 93
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D+ L+ +L+ +Y +A +FD++P RD V+W LI+ Y +N +A+ L ++
Sbjct: 94 DAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDML 153
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
R +P+ T +L+A G GE++H ++ + + + ++L+ MY++C
Sbjct: 154 RAR--FRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQ 211
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ MA VF + K+ VSW+A+I+G A G + F MQR G T++ + SA
Sbjct: 212 MDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA 271
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
+ G +++G + K G ++ + ++G + A ++ M K D
Sbjct: 272 FARIGALEQGRWVHAHLIKS-GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLV 329
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELK 332
W T+L A LG+ + H E++
Sbjct: 330 TWNTMLTAL---AQYGLGKEAVAHFEEIR 355
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 11/246 (4%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
++ ACA L IH ++S L NSLI MY KCG++ A VF MP +D
Sbjct: 66 IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW+ +I+G A N +AI M RA P+ TFT +L A CG G +
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ-MH 184
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
++ + +++ ++D+ R +D A + + V + W L+
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNEVSWNALIAG---FARK 240
Query: 319 TLGERVIEHLIELKAQESG----DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP--G 372
GE + E++ G Y + + ++ +G E+ + + + + G + T G
Sbjct: 241 ADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVG 300
Query: 373 CSTIGL 378
+ +G+
Sbjct: 301 NTMLGM 306
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 290/492 (58%), Gaps = 2/492 (0%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
G +F +M + N + ++ C + G Q+HA+++++ + + T L+D
Sbjct: 275 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 334
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+Y+ +A +F+ + +RD AW V+++ Y ++ + A+ F + RE G KP++
Sbjct: 335 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE--GVKPNE 392
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
T L C+ + L+ G ++H + G M + ++L+ MY+KCG + A VF G
Sbjct: 393 FTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDG 452
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ +D VSW+ +I G + +G G A+++F AM G PD+ TF GVLSACSH GL++EG
Sbjct: 453 LVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 512
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
+ +SK +GI P I HY C+VD+LGRAG + I M + + IW T+LGAC+
Sbjct: 513 KKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACK 572
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+H ++ GER L EL+ + +Y+LL N++++ G W+ V +R M+ +G++ PGC
Sbjct: 573 MHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGC 632
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S + + G VH F+ D SHP+I EI+ L +++++L GY LHN+ EK
Sbjct: 633 SWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQEL 692
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L YHSE+LA+AF +L+T TIR+ KNLRIC DCH+F K +S + N+E+++RD FHH
Sbjct: 693 LFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHH 752
Query: 494 FREGRCSCNDYW 505
F+ G CSC ++W
Sbjct: 753 FKNGSCSCQNFW 764
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 11/332 (3%)
Query: 6 SMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQ 62
S ++SP +E LF MR RI N F + I G IHA V + G++
Sbjct: 63 SSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFE 122
Query: 63 LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
D + + +Y + + F + + + N L+S + + + L
Sbjct: 123 SDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQL 182
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
E G +P+ T + +L+ CA G L G+ IH + + G +L NSL+ +Y+KCG
Sbjct: 183 LVE--GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
S A +VF +PE+DVVSW+A+I+G G+G + F M G P+ TF +L
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILR 299
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+CS VD G ++ K+ + N +VD+ + L+ A + + +K D
Sbjct: 300 SCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDL 357
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
W ++ + GE+ ++ I+++ +
Sbjct: 358 FAWTVIVAG---YAQDGQGEKAVKCFIQMQRE 386
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ E+ F +M+++ + N F + ++ C + +L G Q+H+ ++ G
Sbjct: 363 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 422
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + + L+D+Y+ +A +FD + RDTV+WN +I Y ++ + AL F+
Sbjct: 423 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 482
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G PD+VT + VL AC+H+G +E G+K +S+ +G + ++ +
Sbjct: 483 AMLDE--GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 540
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G + M +V+ W ++ M+G+
Sbjct: 541 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 576
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+I RV+++G DS L ++L+++Y E A ++ +E+P +D WN +S
Sbjct: 10 KIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPY 69
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
++A+ LF + + + + ++ A A LG +GE IH + ++G+ S + +
Sbjct: 70 PLQEAVQLFYLM--RHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+ + MY K S+ ++ FK M +++ S + ++SG + G
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P+ TF +L C+ G ++EG ++ K GI P+ H + +V++ + G + A
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYAC 246
Query: 291 QLITSMGVKPDSTIWRTLL 309
++ + + D W L+
Sbjct: 247 KVFGEIPER-DVVSWTALI 264
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 3/207 (1%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+KI + ++G +L +SL+ +Y KC SL A +V + MP +DV W+ +S
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
++A++ F M+ + + F ++SA + G G + K +G +I
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCK-YGFESDILI 127
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV-IEHLIEL 331
V + + ++ +Q +M ++ ++ L G C G R+ I+ L+E
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTET-CDQGPRILIQLLVEG 186
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKEL 358
++ +L +S GD + K +
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEGKAI 213
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 272/448 (60%), Gaps = 5/448 (1%)
Query: 60 GYQLDSQLMTTLMDLY--STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G + D M +LM ++ E K+F + +++ ++WNV+I Y++N A+
Sbjct: 215 GQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVD 274
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
L+ L E+ +PD +T VL AC L AL G +IH Y+ + + L NSLI M
Sbjct: 275 LY--LQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDM 332
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y++CG L A VF M +DV SW+++IS M G G +A+ F M +G PD F
Sbjct: 333 YARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAF 392
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+LSACSH GL+DEG ++ +M+ D+ I P I HY C+VDLLGRAG +D+AY +I M
Sbjct: 393 VAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMP 452
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++P+ +W TLL +CR+ ++ +G ++L++L ++SG YVLL N+Y+ G W++V E
Sbjct: 453 IEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTE 512
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R M K ++ TPG S + L VH F+ D SHP+ EIY+ L + ++K GYV E
Sbjct: 513 IRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPE 572
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
S LH++ E+K L+ HSEKLAI F +L T IR+ KNLR+C DCH AK++S
Sbjct: 573 TDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISK 631
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ RE+I+RD RFHHF++G CSC DYW
Sbjct: 632 IVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 158/315 (50%), Gaps = 21/315 (6%)
Query: 80 KSFEAC-------KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+S+ AC K+FDE+ R+ V +NV+I Y+ N R D L +F + G +PD
Sbjct: 61 RSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM--VNGGFRPD 118
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ T VL+AC+ L +G IH + + G + + N LIAMY KCG L A VF
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M KDVVSW++M++G A N DA+E M+ G PD T ++ A ++ E
Sbjct: 179 EMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS--SE 236
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLL 309
+++++++ + N+ + ++ + + L QA L M V+PD+ + ++L
Sbjct: 237 NVLYVEKIFVNLE-RKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVL 295
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKG 366
AC + LG R+ E++ K + + +L L+++Y+ G + K + + M +
Sbjct: 296 PACGDLSALLLGRRIHEYV--EKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRD 353
Query: 367 LQT-TPGCSTIGLKG 380
+ + T S G+ G
Sbjct: 354 VASWTSLISAYGMTG 368
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 37/311 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + ++G +F +M + + +K C +L GL IH VL+ G
Sbjct: 90 MIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVG 149
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +Y FEA ++FDE+ +D V+WN +++ Y N R DAL +
Sbjct: 150 LDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICR 209
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E+ G KPD T ++ A A+ SE+ +Y +
Sbjct: 210 EM--EDYGQKPDGCTMASLMPAVANTS------------SEN-------------VLYVE 242
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
++F + K+++SW+ MI N A++ + M++ V PD TF V
Sbjct: 243 --------KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASV 294
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC + G + + K + PN+ ++D+ R G LD A ++ M +
Sbjct: 295 LPACGDLSALLLGRRIHEYVEKK-KLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR- 352
Query: 301 DSTIWRTLLGA 311
D W +L+ A
Sbjct: 353 DVASWTSLISA 363
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+K+H I +L L+ Y+ CG G+ +VF M +++VV ++ MI N
Sbjct: 38 KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
D + F M G PD+ T+ VL ACS + G++ + K G+ N+
Sbjct: 98 HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLK-VGLDFNLFV 156
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++ + G+ G L +A ++ M + D W +++
Sbjct: 157 GNGLIAMYGKCGCLFEARRVFDEM-IWKDVVSWNSMVAG 194
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +S + L+ M++ N + A K L G QI A V++ G
Sbjct: 1080 MMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRG 1139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD +++ ++D+Y + A ++F+EIP D VAW +IS + N + AL +
Sbjct: 1140 FNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYH 1199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ S +PD+ T +++AC+ L ALE G +IH + + SL+ MY+K
Sbjct: 1200 HMRL--SKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAK 1257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A +FK + SW+AMI GLA +G+ +A++ F M+ GV PD TF GV
Sbjct: 1258 CGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGV 1317
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV E M K +GI P I HY C+VD L RAG + +A ++I+SM +
Sbjct: 1318 LSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEA 1377
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++++RTLL ACR+ G+RV E L+ L+ +S YVLL N+Y++ WE V R
Sbjct: 1378 SASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARN 1437
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ PG S + LK VH FV D SH + IY ++ I K+++ GY+ +
Sbjct: 1438 MMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDF 1497
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ E+K +L YHSEKLAIA+G++ TPP TT+RV KNLR+C DCHN K +S V+
Sbjct: 1498 ALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFE 1557
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
REV++RD RFHHFR G CSC DYW
Sbjct: 1558 REVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
D +AWN +S +++ T +A+ F ++ C D +T +++L A L LE G++
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC--DGLTFVVMLSVVAGLNCLELGKQ 927
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
IH + G +++ N LI MY K GS+ A VF M E D+VSW+ MISG A++G
Sbjct: 928 IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
++ F + R G+ PD T VL ACS G
Sbjct: 988 EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 29/303 (9%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+GF+LF +R+ + + K C+ S +H ++ G Q D + L+
Sbjct: 710 DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALV 769
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y+ F + EA LFD + RD V WNV++ Y+ +AL LF NR +G +PD
Sbjct: 770 NIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNR--TGLRPD 827
Query: 133 DVT-CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
DVT C L + LE+ K + YG+K+ F
Sbjct: 828 DVTLCTLARVVKSKQNVLEWQLKQLK-----AYGTKL-------------------FMYD 863
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
DV++W+ +S G +A++ F M + V D TF +LS + ++
Sbjct: 864 DDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLE 923
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G + + G+ + C++++ + G + +A + M + D W T++
Sbjct: 924 LGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-EVDLVSWNTMISG 981
Query: 312 CRI 314
C +
Sbjct: 982 CAL 984
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCY 106
G + HAR+L G+ D L L+ +YS A KLFD P RD V WN ++S +
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
+ RD LF L R S T V + C + E +H Y + G
Sbjct: 705 A--DKARDGFHLFRLLRR--SFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQW 760
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ + +L+ +Y+K G + A +F GM +DVV W+ M+ G +A+ F
Sbjct: 761 DVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFN 820
Query: 227 RAGVFPDDQTF 237
R G+ PDD T
Sbjct: 821 RTGLRPDDVTL 831
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMI 206
L G++ H I G+ L N+LI MYSKCGSL A ++F P+ +D+V+W+A++
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
S A RD F ++R+ V T V C L + G+
Sbjct: 702 SAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCL-LSASPSAAESLHGYAVKIGL 758
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
++ G +V++ + G + +A L MG++ D +W ++ A
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-DVVLWNVMMKA 802
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 303/532 (56%), Gaps = 34/532 (6%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
M +P LF+ + + +P A + A+ C + + Q+H + G +
Sbjct: 52 MRLNPHLALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRR 111
Query: 67 LMTTLMDLYSTFEKSFEACKLFD-------------------------------EIPQRD 95
+ L+ YS F+A K+FD ++P RD
Sbjct: 112 VRNGLIHAYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARD 171
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
+V+WN +I+ + N +A+ +F + + C+PD VT + V+ A A+LGAL G
Sbjct: 172 SVSWNTVIAWCVANGEHEEAVAVFREM-LASNECQPDRVTLVSVISAIAYLGALAQGLWA 230
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGH 214
H Y+ L ++LI MYSKCG + A VF+ + V +W+AM++G +G
Sbjct: 231 HAYVCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGC 290
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
A+E F M+ +G P+ TF +L+ACSH G V+EG+ + +RM+ I P+I HYG
Sbjct: 291 SERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYG 350
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
C+VDL RAGL ++A ++I M ++PD+ +W+ L+GACR + + LG++ LIE
Sbjct: 351 CMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPN 410
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPR 394
+ YVLL N+Y+ G+W+ V ++R+ M G+Q PG S+I L GV+HEF+ D SH R
Sbjct: 411 DHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHSR 470
Query: 395 INEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVLATPPG 453
++Y+ML EI +QLK+AGY + + L ++ E+ K ++L+ HSE+LA+AFG+++T PG
Sbjct: 471 KRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLISTAPG 530
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T IR+ KNLR+C DCHN K+LS +Y R +++RD RFH FREG CSC DYW
Sbjct: 531 TPIRIVKNLRVCGDCHNAIKLLSKIYGRCIMVRDANRFHRFREGSCSCGDYW 582
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/469 (41%), Positives = 278/469 (59%), Gaps = 3/469 (0%)
Query: 39 CCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA 98
C L G IH+ VL G + ++ + T L+++Y EA ++F + ++D V+
Sbjct: 20 CGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAGCLDEATRVFRGLGRKDLVS 79
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREE-SGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
W L+S Y R R+AL LF + G KPD +LQACA L A G HR
Sbjct: 80 WTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHR 139
Query: 158 YISEHGYGSKMNLCN-SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
I E GY S + +I MY KCG+L A EVF GM E+D V+W+ +ISG A +GH
Sbjct: 140 RIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSE 199
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+++ F MQ+ G PD + VLS CSH GLV++G F ++K+FG+ P HYGC+
Sbjct: 200 ESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCM 259
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
+DLLGR+G L+ A +I M + + W L AC++H G+R E ++EL+ +
Sbjct: 260 IDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPA 319
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRIN 396
YV L N+Y++ G+W++V +R M GLQ PG S+I + VHEF D SHPR
Sbjct: 320 A-YVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAA 378
Query: 397 EIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTI 456
EIY +L+ + +Q++ +GYV + L N+ E+K L +HSEKLAIAFG+L+TP G+++
Sbjct: 379 EIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSL 438
Query: 457 RVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
R+ KNLR+C DCH AK +S + RE+ +RD RFHHF++G CSC DYW
Sbjct: 439 RIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/536 (36%), Positives = 295/536 (55%), Gaps = 31/536 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+R + P L+ M R N +F ++ C ++ G Q+ V++
Sbjct: 103 MIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKL 162
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCL 118
G+ D + L+ LY T + A ++FDE+P RD V+WN +I ++R + A L
Sbjct: 163 GFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKL 222
Query: 119 FDNLNREE--------SGC---------------------KPDDVTCLLVLQACAHLGAL 149
F + ++ SGC +P++ + +L A A LG L
Sbjct: 223 FVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTL 282
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
E+G++IH + + +L +L+ MY+KCG + + +F MPEKD SW+ MI GL
Sbjct: 283 EYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGL 342
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A +G G++A+ F G P + TF GVL+ACS GLV EG F M+ +GI P
Sbjct: 343 ATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPE 402
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HYGC+VDLL RAG + A ++I M PD +W ++LG+C++H + LGE + LI
Sbjct: 403 MEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLI 462
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
++ +G YV L +++ + WE V ++R M E+ G S I +G VH FV D
Sbjct: 463 QMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGD 522
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H R EIY+ML+ + ++ AGY A ++S LH++ EEK NA+ HSE+LAIAFG+L
Sbjct: 523 KEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLLV 582
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
T G IR+ KNLR+C DCH +K++S V+ RE+I+RD RFHHF++G CSC DYW
Sbjct: 583 TKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYI 107
Q HAR+L G D ++ + L+ + S A +++ I A N +I C++
Sbjct: 49 QAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFV 108
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ R ++ L+ ++ R P+ T VLQAC++ A+ G ++ ++ + G+
Sbjct: 109 KGDLPRHSISLYSHMCRSFVAA-PNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKD 167
Query: 168 MNLCNSLIAMYSKC--------------------------------GSLGMAFEVFKGMP 195
+ + N+LI +Y C G + +A ++F MP
Sbjct: 168 VFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMP 227
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
EKDV+SW +ISG NG A++ F + + P++ +L+A + G ++ G
Sbjct: 228 EKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKR 287
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ ++ +VD+ + G +D++ L M P+ W + C +
Sbjct: 288 -IHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRM---PEKDKWSWNVMICGLA 343
Query: 316 KH 317
H
Sbjct: 344 TH 345
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 295/505 (58%), Gaps = 15/505 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E LF++M+ + I ++ + AI C +L G QIHA+ G
Sbjct: 510 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG 569
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + L+ LY+ K EA FD+I +D V+WN L+S + ++ +AL +F
Sbjct: 570 YSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFA 629
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+N+ +G + + T + A A++ + G++IH I + GY S+ + N+LI +Y+K
Sbjct: 630 QMNK--AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAK 687
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ D +SW++MI+G + +G G +A++ F M++ V P+ TF GV
Sbjct: 688 CGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGV 734
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLVDEG+ + MS+ ++P HY CVVDLLGR+GLL +A + + M ++P
Sbjct: 735 LSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQP 794
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ +WRTLL AC +HK++ +GE HL+EL+ ++S YVL+ N+Y+ G W+ R+
Sbjct: 795 DAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQ 854
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S + + VH F D +HPR + IY+ L ++ + GYV S
Sbjct: 855 MMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNS 914
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + +K HSE+LAIAFG+L+ T + V KNLR+C DCHN+ K +S + +
Sbjct: 915 LLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITD 974
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+ G CSC DYW
Sbjct: 975 RVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 174/358 (48%), Gaps = 44/358 (12%)
Query: 17 LFEKMRQKRIPTNPFACSFAIK-CCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY 75
LF +M K + + + ++ C S QIHA+ + G++ + + L+DLY
Sbjct: 150 LFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLY 209
Query: 76 STFEKSF--EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
F+ F A K+F+ + RD+V+W +IS +N +A+ LF
Sbjct: 210 --FKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLF-------------- 253
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
C +VL AC + EFG+++H + + G+ S+ +CN+L+ +YS+ G+L A ++F
Sbjct: 254 --CQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHC 311
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
M ++D VS++++ISGLA G+ A+ F M PD T +LSAC+ G + G
Sbjct: 312 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 371
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDL----------------LGRAGLLDQAYQLITSM- 296
F K G+ +I G ++DL G+ L++++Q+ T M
Sbjct: 372 KQFHSYAIKA-GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQ 430
Query: 297 --GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVG 350
G+ P+ + ++L C LGE++ +++ Q + YV +L+++Y+ G
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV-YVSSVLIDMYAKHG 487
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 29/298 (9%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF+KM + + + C +L G Q H+ ++ G D + +L+DLY
Sbjct: 339 LFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLY- 397
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ D + CY + + +F + E G P+ T
Sbjct: 398 --------------VKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIE--GIVPNQFTY 441
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+L+ C LGA + GE+IH + + G+ + + + LI MY+K G L A ++F+ + E
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
DVVSW+AMI+G + +A+ F MQ G+ D+ F +SAC+ +D+G
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 257 -----LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
L S D I +V L R G + +AY + K D+ W +L+
Sbjct: 562 HAQSCLSGYSDDLSI------GNALVSLYARCGKVREAYAAFDQIYAK-DNVSWNSLV 612
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 144/334 (43%), Gaps = 38/334 (11%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+++R DG +L +D Y F A +FDE+P R WN + + +I +
Sbjct: 92 LNSRSFYDGLKL--------IDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERL 143
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACA-HLGALEFGEKIHRYISEHGYGSKMNL 170
LF + + + D+ +VL+ C+ + + F E+IH G+ S +
Sbjct: 144 MGRVPGLFRRMLTK--NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFI 201
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF-----GAM 225
CN LI +Y K G L A +VF+ + +D VSW AMISGL+ NG+ +A+ F A
Sbjct: 202 CNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSAC 261
Query: 226 QRAGVFPDDQTFTGVL--SACSHCGLVDEGMMFLDRMSKDFGILPNIHH---------YG 274
+ F + G++ S V ++ L S + I H Y
Sbjct: 262 TKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYN 321
Query: 275 CVVDLLGRAGLLDQAYQLITSMGV---KPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
++ L + G +++A L M + KPD +LL AC + G++ H +
Sbjct: 322 SLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQF--HSYAI 379
Query: 332 KAQESGDYVL---LLNLYSSVGDWEKVKELREFM 362
KA + D V+ LL+LY D +K EF
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSD---IKTAHEFF 410
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 267/438 (60%), Gaps = 2/438 (0%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+ T++ ++ A ++F + WN +I+ Y+++ +R A+ LFD L
Sbjct: 3 LVTVLSAFAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARR- 61
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+P+ VT + VL ACA L AL G+++H +HG S++ + +++ MYSKCG L A
Sbjct: 62 -IEPNSVTLMEVLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEA 120
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
E F + D VSW+AM++ A +GH A+ +F MQ G P+ TF +LSACSH
Sbjct: 121 VEAFARIERHDTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHK 180
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GLV+EG + D M+ +GI P+ HY C+VDLLGRAG LD+A + M P + + ++
Sbjct: 181 GLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEDFLNRMPGAPHAAVLKS 240
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL ACR +K V GER+ + ++E ES YV+L ++Y + G WE+ +R M E+G+
Sbjct: 241 LLSACRSYKDVDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGV 300
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PG S I ++G V EFV D+SH ++N I L E++ +K AGYV + + LH++
Sbjct: 301 RKDPGRSAIEVEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKEAGYVPDTSLVLHDVAE 360
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
EEK L +HSEKLA+AFG+L TP G+ IRV KNLR+C DCH+ AK++S + R ++ RD
Sbjct: 361 EEKEQVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRD 420
Query: 488 RLRFHHFREGRCSCNDYW 505
RFHHF G CSC DYW
Sbjct: 421 LSRFHHFENGVCSCGDYW 438
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + LF+++ +RI N + C +L G ++HA G
Sbjct: 37 MIAAYVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAALRDGKRVHAIARDHG 96
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T ++D+YS EA + F I + DTV+W +++ + ++ AL F
Sbjct: 97 VDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALATFQ 156
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ +E G KP+ VT + +L AC+H G +E G K ++ +G ++ +
Sbjct: 157 RM--QEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLG 214
Query: 180 KCGSLGMAFEVFKGMP 195
+ G L A + MP
Sbjct: 215 RAGYLDEAEDFLNRMP 230
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/507 (37%), Positives = 295/507 (58%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + P +F+KM +++ A+ C + G +H L D
Sbjct: 348 MIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHK--LLDQ 405
Query: 61 YQL--DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+L D +M +L+ +YS ++ A ++F+ + + V+WN +I Y +N R +A+
Sbjct: 406 LELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDY 465
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + KPD T + V+ A A L L + IH + + + +L+ MY
Sbjct: 466 FCKMQLQ--NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMY 523
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG++ A ++F M E+ V +W+AMI G +G G+ A+E F M++ + P++ TF
Sbjct: 524 AKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFL 583
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLSACSH GLV+EG + M KD+G+ P + HYG +VDLLGRA L++A+ I M +
Sbjct: 584 CVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPI 643
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P +++ +LGACRIHK+V LGE+ + +L + G +VLL N+Y++ W+KV +
Sbjct: 644 EPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARV 703
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M +KG+Q TPG S + L+ VH F SHP+ +IY L+ + ++K AGY+ +
Sbjct: 704 RTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPD- 762
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
T+ +H++ K L+ HSEKLAIAF +L T PGTTI + KNLR+C DCHN K +S V
Sbjct: 763 TNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLV 822
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 823 TKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 139/253 (54%), Gaps = 2/253 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ +SS ++ F +MR + + ++ +K C L G +IH +++ +G
Sbjct: 146 MLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG 205
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + MT ++++Y+ EA K+FD +P+RD V WN +IS Y +N + AL L
Sbjct: 206 FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELV- 264
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +E G +PD +T + +L A A +G+L G IH Y G+ S +N+ +L+ MYSK
Sbjct: 265 -LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSK 323
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+G A +F M K VVSW++MI G NG A+E F M V + T G
Sbjct: 324 CGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGA 383
Query: 241 LSACSHCGLVDEG 253
L AC+ G V++G
Sbjct: 384 LHACADLGDVEQG 396
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
IP++ + AI ++ C+ M L Q ++++G + T L+ L+ F EA
Sbjct: 71 IPSHVYKHPSAI--LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEA 128
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
++F I + ++ ++ Y RN DA+ F + + G +P +L+ C
Sbjct: 129 ARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYD--GVRPVVYNFTYLLKVCG 186
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
L G++IH + +G+ S + ++ MY+KC + A+++F MPE+D+V W+
Sbjct: 187 DNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNT 246
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+ISG A NG G+ A+E MQ G PD T +L A + G
Sbjct: 247 IISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 153 EKIHRYIS---EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+++H++I ++G S+ L++++ K GSL A VF+ + +K + M+ G
Sbjct: 91 KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A N DA+ F M+ GV P FT +L C + +G ++ + G N
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVN-GFASN 209
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ VV++ + L+++AY++ M + D W T++ + G+ +E +
Sbjct: 210 VFAMTGVVNMYAKCRLVEEAYKMFDRMPER-DLVCWNTIISG---YAQNGFGKTALE--L 263
Query: 330 ELKAQESG---DYVLLLNLYSSVGD 351
L+ QE G D + ++++ +V D
Sbjct: 264 VLRMQEEGKRPDSITIVSILPAVAD 288
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 291/506 (57%), Gaps = 1/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++AY ++ P LF++MR RI + + + + LR G
Sbjct: 319 IIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKG 378
Query: 61 YQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ L D + ++ +Y+ A +F+ +P +D ++WN +IS Y +N +A+ ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMY 438
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + E + T + VL AC+ GAL G K+H + ++G + + SL MY
Sbjct: 439 NIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYG 498
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A +F +P + V W+ +I+ +GHG A+ F M GV PD TF
Sbjct: 499 KCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 558
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLVDEG + M D+GI P++ HYGC+VDL GRAG L+ A I SM ++
Sbjct: 559 LLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQ 618
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD++IW LL ACR+H +V LG+ EHL E++ + G +VLL N+Y+S G WE V E+R
Sbjct: 619 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIR 678
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ KGL+ TPG S++ + V F + +HP E+Y+ L ++++LK+ GYV +
Sbjct: 679 SITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHR 738
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ +EK + L HSE+LA+AF ++ TP TTIR+ KNLR+C DCH+ K +S +
Sbjct: 739 FVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKIT 798
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 799 EREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 166/352 (47%), Gaps = 15/352 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y S + +E L + +R + + C + G+ IH+ ++ G
Sbjct: 222 MISGYCQSGNAKEALTLSDGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+DLY+ F + K+FD + RD ++WN +I Y N++ A+ LF
Sbjct: 278 LESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQ 337
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG-SKMNLCNSLIAMYS 179
+ S +PD +T + + + LG + + + G+ + + N+++ MY+
Sbjct: 338 EMRL--SRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG--VFPDDQTF 237
K G + A VF +P KDV+SW+ +ISG A NG +AIE + M+ G + + T+
Sbjct: 396 KLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTW 455
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VL ACS G + +GM R+ K+ G+ ++ + D+ G+ G LD A L +
Sbjct: 456 VSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP 514
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSS 348
+ +S W TL+ H H GE+ + E L D++ + L S+
Sbjct: 515 -RVNSVPWNTLIACHGFHGH---GEKAVMLFKEMLDEGVKPDHITFVTLLSA 562
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 8/270 (2%)
Query: 41 MKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
+K C ++ G +IH L+ G+ D + +L+ LY + A LFDE+P RD +W
Sbjct: 160 LKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSW 219
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N +IS Y ++ ++AL L D L D VT + +L AC G G IH Y
Sbjct: 220 NAMISGYCQSGNAKEALTLSDGLR------AMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+HG S++ + N LI +Y++ GSL +VF M +D++SW+++I +N AI
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M+ + + PD T + S S G + + L +I VV +
Sbjct: 334 LLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ GL+D A + + K D W T++
Sbjct: 394 YAKLGLVDSARAVFNWLPNK-DVISWNTII 422
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 180/404 (44%), Gaps = 23/404 (5%)
Query: 37 IKCCMKFCS-LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
+ ++C+ L +HAR++ + + L++LY A FD I RD
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRD 116
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
AWN++IS Y R + + + F +L SG +PD T VL+AC ++ G KI
Sbjct: 117 VYAWNLMISGYGRAGYSSEVIRCF-SLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKI 172
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + G+ + + SLI +Y + G++ A +F MP +D+ SW+AMISG +G+
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNA 232
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
++A+ ++ D T +LSAC+ G + G+ + S G+ +
Sbjct: 233 KEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNK 287
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ- 334
++DL G L ++ M V+ D W +++ A +++ + + + + Q
Sbjct: 288 LIDLYAEFGSLKDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQP 346
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPR 394
+ + L ++ S +G+ + ++ F KG TIG VV + V R
Sbjct: 347 DCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLED--ITIGNAVVVMYAKLGLVDSAR 404
Query: 395 INEIYQML---DEINKQLKIAGYV----AEITSELHNLGAEEKG 431
++ L D I+ I+GY A E++N+ EE G
Sbjct: 405 --AVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGG 446
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 284/505 (56%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + E+ F MR++ + + F +CC ++ G Q+HA V+R G
Sbjct: 145 MVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSG 204
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + +L +Y E + +P V++N I+ +N + AL F
Sbjct: 205 MDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFS 264
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E PD VT + + C+ L AL G+++H + + G + + SL+ MYS+
Sbjct: 265 MMRGVEVA--PDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSR 322
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG LG + V+ G D+ SAMIS +G G A+E F M G P++ TF +
Sbjct: 323 CGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLAL 382
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL DEG+ F + M+K +G P++ HY C+VDLLGR+G LD+A LI SM V+
Sbjct: 383 LYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRA 442
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IW+TLL AC+ K+ + ER+ E +IE ++S YVLL N+ ++ W V E+R+
Sbjct: 443 DGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRK 502
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK ++ PG S + KG VH+F D SHPR EI + L E+ +++ GY ++T
Sbjct: 503 IMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTM 562
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H++ EEK +L++HSEKLAIAF L P G IRV KNLR+C DCH K++S V
Sbjct: 563 VFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTG 622
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR+GRCSC DYW
Sbjct: 623 REIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD++P R+ WN +++ D+L F + RE G PD+ V + C
Sbjct: 127 ARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRRE--GMHPDEFGLGSVFRCC 184
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L + G ++H Y+ G S M + NSL MY +CG L V + +P +VS++
Sbjct: 185 AGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFN 244
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
I+G NG A+E F M+ V PD TF +S CS + +G
Sbjct: 245 TTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQG 294
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T +L A A LG L + IS+ S N LI K G LG A E+F
Sbjct: 76 DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMS----WNILIGGCIKNGDLGSARELF 131
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP ++V +W+AM++GL G D+++ F AM+R G+ PD+ V C+ GL+D
Sbjct: 132 DKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCA--GLLD 189
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N+L+ Y+ G L A +F+G+ +++V+SW+ +I G NG A E F M V
Sbjct: 81 NNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNV- 139
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD---- 287
T+ +++ ++ GL ++ + F M ++ G+ P+ G V AGLLD
Sbjct: 140 ---ATWNAMVAGLTNVGLDEDSLQFFLAMRRE-GMHPDEFGLGSVFRCC--AGLLDVVSG 193
Query: 288 -QAYQLITSMGVKPDSTIWRTL 308
Q + + G+ D + +L
Sbjct: 194 RQVHAYVVRSGMDSDMCVGNSL 215
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/508 (39%), Positives = 291/508 (57%), Gaps = 33/508 (6%)
Query: 31 FACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
F F +K C + G +H + LR G + D + +L+D+Y +A KLFD+
Sbjct: 108 FTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDK 167
Query: 91 IPQRDTVAWNVLISCYIR-------------------------------NQRTRDALCLF 119
+ RD +WN LI+ Y++ N AL LF
Sbjct: 168 MIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLF 227
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
D + ++ S KP+ VT + VL ACA ALE G +IH + + G ++ +L MY+
Sbjct: 228 DEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYA 287
Query: 180 KCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
KC SL A F + + K++++W+ MI+ A +G G +A+ F M RAGV PD TF
Sbjct: 288 KCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTF 347
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
G+LS CSH GL+D G+ + M + P + HY CVVDLLGRAG L +A +LI+ M
Sbjct: 348 MGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMP 407
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++ ++W LL ACR H+++ + E L L+ SG+YVLL NLY+ G WE+VK+
Sbjct: 408 MQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKK 467
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR + +G++ +PGCS I + G H F+ D SHP+ EIY+ L+ + +++K+AGY+ +
Sbjct: 468 LRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPD 527
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ LH++ EEK L+ HSEKLAIAFG+L T PG +RV KNLRIC DCH K +S
Sbjct: 528 TSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISK 587
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+Y RE+I+RD RFH F++G CSC DYW
Sbjct: 588 IYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 10/241 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + E+ LF++M Q P + + C + +L G +IH
Sbjct: 210 MISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 269
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDAL 116
G L+S + T L +Y+ EA FD I Q ++ +AWN +I+ Y + +A+
Sbjct: 270 IGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 329
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLI 175
+F+N+ R +G +PD VT + +L C+H G ++ G + + H ++ ++
Sbjct: 330 SIFENMLR--AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVV 387
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ + G L A E+ MP + S W A+++ A H I A + + PD+
Sbjct: 388 DLLGRAGRLVEAKELISQMPMQAGPSVWGALLA--ACRSHRNLEIAELAARRLFVLEPDN 445
Query: 235 Q 235
Sbjct: 446 S 446
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D+ T VL++CA L + G +H G + SLI MY KCG +G A ++F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M +D+ SW+A+I+G G A + F M+ + ++T ++S + G +
Sbjct: 166 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIV----SWTAMISGYTQNGFAE 221
Query: 252 EGMMFLDRMSKD 263
+ + D M +D
Sbjct: 222 QALGLFDEMLQD 233
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 265/455 (58%), Gaps = 2/455 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
IH ++ G L+ + T +Y+ + A LFDE P++ VAWN +IS Y +N
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
T A+ LF + + E P+ VT +L ACA LG+L FG+ +H I + +
Sbjct: 391 STETAISLFKEMMKTE--FTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYV 448
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+L+ MY+KCG++ A+++F M EK+ V+W+ MI G ++G+G +A++ + M G
Sbjct: 449 STALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGY 508
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P TF VL ACSH GLV EG M + I P I HY C+VD+LGR+G L++A
Sbjct: 509 NPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKAL 568
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
+ I M V+P +W TLLGAC IHK + E L EL G YVLL N+YS
Sbjct: 569 EFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVER 628
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
++ K +R+ + ++ L +PGC+ I + G H FV D SH +IY L+++ +++
Sbjct: 629 NFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMR 688
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GY AE LH++ EEK A++ HSEKLAIAFG++ T PG IR+ KNLR+C+DCH
Sbjct: 689 EMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHT 748
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + R +++RD RFHHF++G CSC DYW
Sbjct: 749 ATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 191/421 (45%), Gaps = 43/421 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
+VR +S++ SP L+ +R+ + + F +FA+ C LM +HA + D
Sbjct: 81 LVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHSIID 137
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
GY + + + L+DLY F + A K+FD +P+RDTV WN +I+ ++N D++ LF
Sbjct: 138 GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLF 197
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G + D T VL A A L L+ G I + G+G + LI++YS
Sbjct: 198 REMVAD--GVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYS 255
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A +F+ + D+++++AMISG NG +++ F + +G T G
Sbjct: 256 KCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVG 315
Query: 240 VLS----------ACSHCGL-VDEGMMFLDRMSKDFGILPN------------------- 269
++ ACS G V G++ +S F + N
Sbjct: 316 LIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKT 375
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ + ++ + G + A L M P++ T+L AC ++ G+ V
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWV-H 434
Query: 327 HLIELKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKGVVH 383
HLI+ + E YV L+++Y+ G+ + +L + M+EK T GL G H
Sbjct: 435 HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGH 494
Query: 384 E 384
E
Sbjct: 495 E 495
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q HA+ + +GY+ D +T L F + A LF +P+ D +NVL+ + N
Sbjct: 30 QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
++ L+ +L R + PD+ T + AC++ L +H + GYGS + +
Sbjct: 90 SPSSSISLYTHL-RRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFV 145
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++L+ +Y K + A +VF GMPE+D V W+ MI+GL N D+I+ F M GV
Sbjct: 146 GSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGV 205
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM 254
D T T VL A + + GM
Sbjct: 206 RVDSSTVTAVLPAAAELQELKVGM 229
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + S E LF++M + N + + C + SL G +H + +
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN 441
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + T L+D+Y+ EA +LFD + +++TV WN +I Y + +AL L++
Sbjct: 442 LEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYN 501
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYS 179
+ G P VT L VL AC+H G + GE+I H ++++ + ++ +
Sbjct: 502 EM--LHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILG 559
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G L A E K MP E W ++
Sbjct: 560 RSGQLEKALEFIKKMPVEPGPAVWGTLL 587
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/443 (42%), Positives = 277/443 (62%), Gaps = 7/443 (1%)
Query: 68 MTTLMDLYSTFEKSFE---ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+T+ + + + K+ E A ++F E+P RD V+W+ +I + N +A F L R
Sbjct: 200 LTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLR 259
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
EE + ++V+ VL ACA GA EFG+ +H ++ + G+ ++ N+LI YSKCG++
Sbjct: 260 EE--IRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNV 317
Query: 185 GMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
MA VF+ MP + +VSW+++I+GLAM+G G +AI+ F M+ +GV PD TF +L A
Sbjct: 318 AMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYA 377
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GLV+EG +M +GI P I HYGC+VDL GRA L +AY+ I M V P++
Sbjct: 378 CSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAI 437
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IWRTLLGAC IH ++ + E V L E+ SGD+VLL N+Y+ G W+ V +R M
Sbjct: 438 IWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMT 497
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI-AGYVAEITSEL 422
E ++ TPG S I + V++ FV + + E ++ L EI +L+ AGY ++ S L
Sbjct: 498 EHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVL 557
Query: 423 HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNRE 482
H++ EEK +++S HSEKLA AFG+ P G +R+ KNLR+C DCH K++S VY E
Sbjct: 558 HDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVE 617
Query: 483 VIIRDRLRFHHFREGRCSCNDYW 505
+I+RDR RFH F++G CSC DYW
Sbjct: 618 IIVRDRSRFHSFKDGFCSCRDYW 640
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 48/338 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R+ S+S +P + F ++R Q + + F +FA+K L G+Q+H++ R
Sbjct: 73 LIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRH 132
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + TTL+ +Y+ S A ++FDE+ + + V WN +++ R A +F
Sbjct: 133 GFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVF 192
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
GC P + N ++A Y+
Sbjct: 193 --------GCMPV---------------------------------RNLTSWNGMLAGYA 211
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G LG+A VF MP +D VSWS MI G A NG +A F + R + ++ + TG
Sbjct: 212 KAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTG 271
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSAC+ G + G + + K G L ++D + G + A + +M V
Sbjct: 272 VLSACAQAGAFEFGKILHGFVEKA-GFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVA 330
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
W +++ +H GE I+ E+ +ESG
Sbjct: 331 RSIVSWTSIIAGLAMHG---CGEEAIQLFHEM--EESG 363
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 291/494 (58%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+ G +F +M + N + ++ C + G Q+HA+++++ + + T L
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ +A +F+ + +RD AW V+++ Y ++ + A+ F + RE G KP
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE--GVKP 631
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
++ T L C+ + L+ G ++H + G M + ++L+ MY+KCG + A VF
Sbjct: 632 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 691
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
G+ +D VSW+ +I G + +G G A+++F AM G PD+ TF GVLSACSH GL++
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 751
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + +SK +GI P I HY C+VD+LGRAG + I M + + IW T+LGA
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C++H ++ GER L EL+ + +Y+LL N++++ G W+ V +R M+ +G++ P
Sbjct: 812 CKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEP 871
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS + + G VH F+ D SHP+I EI+ L +++++L GY LHN+ EK
Sbjct: 872 GCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQ 931
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L YHSE+LA+AF +L+T TIR+ KNLRIC DCH+F K +S + N+E+++RD F
Sbjct: 932 ELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCF 991
Query: 492 HHFREGRCSCNDYW 505
HHF+ G CSC ++W
Sbjct: 992 HHFKNGSCSCQNFW 1005
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 7/334 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ E+ LF +M I + F S +K C +L G +H+ +R G
Sbjct: 301 LLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIG 360
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD + L+D+YS + +A K+F I D V+W+ +I+C + ++R+A +F
Sbjct: 361 CELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFK 420
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG P+ T ++ A LG L +GE IH + ++G+ +CN+L+ MY K
Sbjct: 421 RM--RHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMK 478
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ VF+ +D++SW+A++SG N + F M G P+ TF +
Sbjct: 479 IGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISI 538
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L +CS VD G ++ K+ + N +VD+ + L+ A + + +K
Sbjct: 539 LRSCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKR 596
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
D W ++ + GE+ ++ I+++ +
Sbjct: 597 DLFAWTVIVAG---YAQDGQGEKAVKCFIQMQRE 627
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 141/273 (51%), Gaps = 4/273 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C L G IH +V++ G DS L +L+++Y+ + ACK+F EIP+RD
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 194
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+W LI+ ++ A+ LF + RE G + ++ T L+AC+ LEFG+++H
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRRE--GVEANEFTYATALKACSMCLDLEFGKQVH 252
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G S + + ++L+ +Y+KCG + +A VF MP+++ VSW+A+++G A G
Sbjct: 253 AEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAE 312
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ F M + + T + VL C++ G + G + + ++ G + C+
Sbjct: 313 KVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQI-VHSLAIRIGCELDEFISCCL 371
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
VD+ + GL A ++ + PD W ++
Sbjct: 372 VDMYSKCGLAGDALKVFVRIE-DPDVVSWSAII 403
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +MR++ + N F + A+K C L G Q+HA ++ G D + + L+DLY+
Sbjct: 216 LFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYA 275
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ A ++F +P+++ V+WN L++ + + L LF + E T
Sbjct: 276 KCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSE--INFSKFTL 333
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL+ CA+ G L G+ +H G + L+ MYSKCG G A +VF + +
Sbjct: 334 STVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED 393
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
DVVSWSA+I+ L G R+A E F M+ +GV P+ T ++SA + G
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ CA G L G+ IH + + G +L NSL+ +Y+KCGS A +VF +PE+D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW+A+I+G G+G A+ F M+R GV ++ T+ L ACS C ++ G
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
K G ++ +VDL + G + A ++ M K ++ W LL
Sbjct: 254 EAIK-VGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALL 302
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ E+ F +M+++ + N F + ++ C + +L G Q+H+ ++ G
Sbjct: 604 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 663
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + + L+D+Y+ +A +FD + RDTV+WN +I Y ++ + AL F+
Sbjct: 664 QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 723
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G PD+VT + VL AC+H+G +E G+K +S+ +G + ++ +
Sbjct: 724 AMLDE--GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 781
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G + M +V+ W ++ M+G+
Sbjct: 782 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 817
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 297/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS P + LF +M + N F S IK G Q+H ++ G
Sbjct: 123 LISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + L+DLY+ + +A +FD + R+ V+WN LI+ + R T AL LF
Sbjct: 183 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQ 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G +P + + AC+ G LE G+ +H Y+ + G N+L+ MY+K
Sbjct: 243 GMLRE--GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A ++F + ++DVVSW+++++ A +G G +A+ F M+R G+ P++ +F V
Sbjct: 301 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSV 360
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL+DEG + + M KD GI+ HY +VDLLGRAG L++A + I M ++P
Sbjct: 361 LTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEP 419
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ IW+ LL ACR+HK+ LG EH+ EL + G +V+L N+Y+S G W +R+
Sbjct: 420 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 479
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E G++ P CS + ++ +H FV +D HP+ EI + +E+ ++K GYV + +
Sbjct: 480 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 539
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ +E+ L YHSEK+A+AF +L TPPG+TI + KN+R+C DCH+ K+ S
Sbjct: 540 VIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVG 599
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 600 REIIVRDTNRFHHFKDGACSCKDYW 624
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 145/290 (50%), Gaps = 4/290 (1%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
IP + + +K C F L G +H +++ ++ D + TL+++Y+ EA
Sbjct: 47 IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
K+FD++P+RD V W LIS Y ++ R DAL LF+ + R G P++ T V++A A
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLR--FGFSPNEFTLSSVIKAAAA 164
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
G ++H + + G+ S +++ ++L+ +Y++ G + A VF + ++ VSW+A+
Sbjct: 165 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 224
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+G A A+E F M R G P ++ + ACS G +++G M K
Sbjct: 225 IAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 284
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
L ++D+ ++G + A ++ + K D W +LL A H
Sbjct: 285 KLVAFAG-NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 332
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ C L G +H ++ + + + + N+L+ MY+KCGSL A +VF MPE+D
Sbjct: 57 LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH-----CGLVDEG 253
V+W+ +ISG + + DA+ F M R G P++ T + V+ A + CG G
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA-- 311
G N+H ++DL R GL+D A + ++ + D + W L+
Sbjct: 177 FCV------KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHA 229
Query: 312 --CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKG 366
C K + L + ++ E Y L SS G E+ K + +M + G
Sbjct: 230 RRCGTEKALELFQGMLR---EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 283
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 295/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P E L M + R N F + +K + G QIHA ++ G
Sbjct: 123 LIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCG 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ K A +FD++ ++ V+WN LIS + R AL F
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFA 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T V + A LGALE G+ +H ++ + + N+L+ MY+K
Sbjct: 243 EMLR--NGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAK 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + KD+V+W++M++ A G G++A+ F M+++GV+ + TF +
Sbjct: 301 SGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCI 360
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + + M K++ + P I HY VV LLGRAGLL+ A I M ++P
Sbjct: 361 LTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEP 419
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LL ACR+HK+ +G+ +H+ EL +SG VLL N+Y+S G W+ +R
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRM 479
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV +D +HP+ EIY+M EI+K+++ GYV ++
Sbjct: 480 MMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDY 539
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK L YHSEKLA+AF ++ P G TIR+ KN+RIC DCH+ K +S V+
Sbjct: 540 VLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFG 599
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 600 REIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 149/314 (47%), Gaps = 10/314 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT SF I C + +L +IHA + + D+ L +L+ +Y +A
Sbjct: 49 PTPRVYRSF-ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARN 107
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD++ ++D V+W LI+ Y +N +A+ L + + KP+ T +L+A
Sbjct: 108 VFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGR--FKPNGFTFASLLKAAGAY 165
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G +IH + G+ + + ++L+ MY++CG + MA VF + K+ VSW+A+I
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A G G A+ +F M R G T++ V S+ + G +++G + K
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQK 285
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
L ++D+ ++G + A ++ + K D W ++L A LG+ +
Sbjct: 286 LTAFVG-NTLLDMYAKSGSMIDARKVFDRVDNK-DLVTWNSMLTA---FAQYGLGKEAVS 340
Query: 327 HLIELKAQESGDYV 340
H E++ +SG Y+
Sbjct: 341 HFEEMR--KSGVYL 352
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 296/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S+ P +M+ + + F + C K SL G ++H ++R+
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +++ LY + LFD + + V+WN +I+ Y++N AL +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G + ++ + V AC+ L +L G + H Y +H + SLI MY+K
Sbjct: 587 QMVL--YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ + +VF G+ EK SW+AMI G ++G ++AI+ F MQR G PDD TF GV
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVK 299
L+AC+H GL+ EG+ +LD+M FG+ PN+ HY CV+D+LGRAG LD+A +++ M +
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D IW++LL +CRIH+++ +GE+V L EL+ ++ +YVLL NLY+ +G WE V+++R
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ MNE L+ GCS I L V FVV + EI + + ++ GY +
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S H+L EEK L HSEKLA+ +G++ T GTTIRV KNLRICVDCHN AK++S V
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 181/438 (41%), Gaps = 72/438 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI----------------------------PTNPFA 32
++ Y+M SP++ ++F+ +R K + T+
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 33 CSFAIKCCMKFCSLMG----GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
F C +K C+ M GL +H V++ G D + L+ Y T +A +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE--ESGCKPDDVTCLLVLQACAHL 146
D +P+R+ V+WN +I + N + ++ L + E + PD T + VL CA
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G+ +H + + ++ L N+L+ MYSKCG + A +FK K+VVSW+ M+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 207 SGLAMNGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSACS-----------HCGLVDEG 253
G + G + M G V D+ T + C HC + +
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 254 MMFLDRMSKDF------------------GILP-NIHHYGCVVDLLGRAG----LLDQAY 290
++ + ++ F GI ++ + ++ ++ LD
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSSV 349
Q+ S G+ PDS +LL AC K + LG+ V +I ++ Y+ +L+LY
Sbjct: 486 QMKIS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 350 GDWEKVKELREFMNEKGL 367
G+ V+ L + M +K L
Sbjct: 545 GELCTVQALFDAMEDKSL 562
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 17/257 (6%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T ++ +Y+ ++ +FD + ++ WN +IS Y RN+ + L F +
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM- 177
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ PD T V++ACA + + G +H + + G + + N+L++ Y G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA---GVF-PDDQTFTG 239
+ A ++F MPE+++VSW++MI + NG ++ G M G F PD T
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 240 VLSACSH-----CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
VL C+ G G R+ K+ +L N ++D+ + G + A Q+I
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKEL-VLNN-----ALMDMYSKCGCITNA-QMIF 350
Query: 295 SMGVKPDSTIWRTLLGA 311
M + W T++G
Sbjct: 351 KMNNNKNVVSWNTMVGG 367
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 56/309 (18%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMN---LCNSLIAMYSKCGSLGMAFEVFKGM 194
L+LQA +E G KIH+ +S G N LC +I MY+ CGS + VF +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVS--GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACS-------- 245
K++ W+A+IS + N + +E+F M + PD T+ V+ AC+
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 246 ---HCGLVDEGMM-----------------FLDRMSKDFGILP--NIHHYGCVVDLLGRA 283
H +V G++ F+ + F I+P N+ + ++ +
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 284 GLLDQAYQLITSM-------GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
G ++++ L+ M PD T+L C + + LG+ V H +K +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV--HGWAVKLRLD 324
Query: 337 GDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
+ VL L+++YS G + + + N K + + +V F + +H
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNK--------NVVSWNTMVGGFSAEGDTHG 376
Query: 394 RINEIYQML 402
+ + QML
Sbjct: 377 TFDVLRQML 385
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/451 (41%), Positives = 271/451 (60%), Gaps = 3/451 (0%)
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
RV D T+M Y+ E +LFD++ + V WNV+I+ Y++N ++
Sbjct: 202 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM-KLGNVTWNVIIAAYMQNGHAKE 260
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ F + E P+ VT + VL A A+L A G H I + G+ S + NSL
Sbjct: 261 AISSFHQMRLE--NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSL 318
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
I MY+KCG L + ++F M KD VSW+AM+SG A++GHG AI F MQ + V D
Sbjct: 319 IDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDS 378
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+F VLSAC H GLV+EG MS + I P++ HY C+VDLLGRAGL D+ I
Sbjct: 379 VSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIK 438
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
M V+PD+ +W LLG+CR+H +V LGE ++HL++L+ + +V+L ++Y+ G W
Sbjct: 439 VMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWAD 498
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
+ R MN+ GL+ TPGCS + LK VH F V D SHP++ ++ + + + ++++ GY
Sbjct: 499 AGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGY 558
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
V + + L N+ E+K L HSE+LAI F +L TPPG+TI++ KNLR+C DCH K
Sbjct: 559 VPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKF 618
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + R +I+RD RFHHF +G CSCNDYW
Sbjct: 619 ISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 41/306 (13%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
LQIHA+++ G++ +T L++LYS F K A +FD P + WN +I Y R+
Sbjct: 69 LQIHAQIIVSGFK-HHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 127
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
++ +AL ++ + E+ G + D ++ + +G L+ ++ + + +
Sbjct: 128 KQYNEALEMYYCM-VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA--- 183
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG---------------- 213
N++IA S+ +A VF M ++D VSW M++G A NG
Sbjct: 184 -WNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 242
Query: 214 --------------HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
H ++AI SF M+ P+ TF VL A ++ EGM F
Sbjct: 243 VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHAC 302
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
+ + G L N ++D+ + G LD + +L M K D+ W +L +H H
Sbjct: 303 IIQ-MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAMLSGYAVHGH-- 358
Query: 320 LGERVI 325
G+R I
Sbjct: 359 -GDRAI 363
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + +E F +MR + N + + G+ HA +++ G
Sbjct: 248 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 307
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + +L+D+Y+ + + KLF+E+ +DTV+WN ++S Y + A+ LF
Sbjct: 308 FLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFS 367
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS--LIAMY 178
+ +ES + D V+ + VL AC H G +E G KI +S+ Y K +L + ++ +
Sbjct: 368 LM--QESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSD-KYHIKPDLEHYACMVDLL 424
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G K MP E D W A++ M+ +
Sbjct: 425 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 461
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/466 (41%), Positives = 287/466 (61%), Gaps = 9/466 (1%)
Query: 44 CSLMG----GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
CSL G +Q+ ++ +G +S +T++ + T + A K+FD + R+ V+W
Sbjct: 185 CSLYGLCDDAVQLIMQMQEEGICPNS---STIVGVLPTCQCLLYARKIFDVMGVRNEVSW 241
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+ +I Y+ + ++AL +F + + SG PD T L VL AC+HL AL+ G H Y+
Sbjct: 242 SAMIGGYVASDCMKEALDIFRMM--QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL 299
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
G+ + +CN+LI MYSKCG + A EVF M D+VSW+AMI G ++G G +A+
Sbjct: 300 IVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEAL 359
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F + G+ PDD TF +LS+CSH GLV EG ++ D MS+DF I+P + H C+VD+
Sbjct: 360 GLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDI 419
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
LGRAGL+D+A+ I +M +PD IW LL ACRIHK++ LGE V + + L + +G++
Sbjct: 420 LGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNF 479
Query: 340 VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY 399
VLL N+YS+ G W+ +R + GL+ PGCS I + G+VH FV D SH ++++I
Sbjct: 480 VLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQIN 539
Query: 400 QMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVA 459
+ L+E+ ++K GY AE + ++ EEK L YHSEKLAIAFG+L G I V
Sbjct: 540 RKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVT 599
Query: 460 KNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KNLR+C DCH K ++ + RE+ +RD RFHHF+ G C+C D+W
Sbjct: 600 KNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 13/279 (4%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C++ SL +IH L++ DS ++ L LY + + A +LFDEIP
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+ WN +I Y N A+ L+ ++ G +P+ T VL+AC+ L A+E G +IH
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSM--LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G S + +C +L+ Y+KCG L A +F M +DVV+W+AMI+G ++ G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
DA++ MQ G+ P+ T GVL C + +++ ++ G+ + + +
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTC-------QCLLYARKIFDVMGVRNEV-SWSAM 244
Query: 277 VDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
+ + + +A + M G+ PD T +L AC
Sbjct: 245 IGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPAC 283
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 180/451 (39%), Gaps = 71/451 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++RAY+ + + L+ M + N + F +K C ++ G++IH+ G
Sbjct: 80 IIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+D Y+ EA +LF + RD VAWN +I+ DA+ L
Sbjct: 140 LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI- 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G P+ T + VL C L +Y++
Sbjct: 199 -MQMQEEGICPNSSTIVGVLPTCQCL------------------------------LYAR 227
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
++F M ++ VSWSAMI G + ++A++ F MQ +G+ PD T GV
Sbjct: 228 --------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGV 279
Query: 241 LSACSHC-----GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
L ACSH G G + + + D I ++D+ + G + A ++
Sbjct: 280 LPACSHLAALQHGFCSHGYLIVRGFATDTLIC------NALIDMYSKCGKISFAREVFNR 333
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M + D W ++ IH + L+ L + D + + L SS V
Sbjct: 334 MD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKP--DDITFICLLSSCSHSGLV 390
Query: 356 KELREFMN--EKGLQTTPG-------CSTIGLKGVV---HEFVVDDVSHPRINEIYQMLD 403
E R + + + P +G G++ H F+ + P + +L
Sbjct: 391 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450
Query: 404 --EINKQLKIAGYVAEITSELHNLGAEEKGN 432
I+K +++ E++ ++ +LG E GN
Sbjct: 451 ACRIHKNIELG---EEVSKKIQSLGPESTGN 478
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L +L+AC +L +KIH++ ++ + ++ + L +Y C + +A +F +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
V+ W+ +I A NG AI+ + +M GV P+ T+ VL ACS +++G+
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE- 130
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ +K FG+ ++ +VD + G+L +A +L +SM + D W ++ C ++
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLY 188
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/449 (42%), Positives = 269/449 (59%), Gaps = 9/449 (2%)
Query: 64 DSQLMTTLMDLYS--TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D+ M +L+ S T E +F ++ ++ V+WNV+I Y++N +A+ L+
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ E G +PD V+ VL AC AL G+KIH YI + L N+LI MY+KC
Sbjct: 300 M--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF+ M +DVVSW+AMIS +G G DA+ F +Q +G+ PD F L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+ACSH GL++EG M+ + I P + H C+VDLLGRAG + +AY+ I M ++P+
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+W LLGACR+H +G + L +L ++SG YVLL N+Y+ G WE+V +R
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M KGL+ PG S + + ++H F+V D SHP+ +EIY+ LD + K++K GYV + S
Sbjct: 538 MKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESA 597
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATP-----PGTTIRVAKNLRICVDCHNFAKVLS 476
LH++ E+K L+ HSEKLAI F ++ T TIR+ KNLRIC DCH AK++S
Sbjct: 598 LHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLIS 657
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ +RE+IIRD RFH FR G CSC DYW
Sbjct: 658 QITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 168/337 (49%), Gaps = 16/337 (4%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H+R++ + + +S L LM Y++ + A K+FDEIP+R+ + NV+I Y+ N
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 112 TRDALCLFDNLNREESGC--KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ + +F + GC +PD T VL+AC+ G + G KIH ++ G S +
Sbjct: 121 YGEGVKVFGTM----CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N L++MY KCG L A V M +DVVSW++++ G A N DA+E M+
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ D T +L A S+ E +M++ M G ++ + ++ + + + +A
Sbjct: 237 ISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEA 293
Query: 290 YQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLN 344
+L + M G +PD+ ++L AC ++LG++ I IE K + L++
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALID 352
Query: 345 LYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
+Y+ G EK +++ E M + + + T S G G
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y ++ P E L+ +M + + + + C +L G +IH + R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L+D+Y+ +A +F+ + RD V+W +IS Y + R DA+ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
L ++SG PD + + L AC+H G LE G + +++H ++ ++ +
Sbjct: 400 KL--QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G + A+ + M E + W A++
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 128/313 (40%), Gaps = 41/313 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + EG +F M + + + +K C +++ G +IH + G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+ +Y EA + DE+ +RD V+WN L+ Y +NQR DA
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA----- 225
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L+ C + +++ H G+ SL+ S
Sbjct: 226 -------------------LEVCREMESVKIS---------HDAGTMA----SLLPAVSN 253
Query: 181 CGSLGMAF--EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ + + ++F M +K +VSW+ MI N +A+E + M+ G PD + T
Sbjct: 254 TTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL AC + G + + ++PN+ ++D+ + G L++A + +M
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 299 KPDSTIWRTLLGA 311
+ D W ++ A
Sbjct: 373 R-DVVSWTAMISA 384
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 296/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S+ P +M+ + + F + C K SL G ++H ++R+
Sbjct: 217 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 276
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +++ LY + LFD + + V+WN +I+ Y++N AL +F
Sbjct: 277 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 336
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G + ++ + V AC+ L +L G + H Y +H + SLI MY+K
Sbjct: 337 QMVL--YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 394
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ + +VF G+ EK SW+AMI G ++G ++AI+ F MQR G PDD TF GV
Sbjct: 395 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 454
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVK 299
L+AC+H GL+ EG+ +LD+M FG+ PN+ HY CV+D+LGRAG LD+A +++ M +
Sbjct: 455 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 514
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D IW++LL +CRIH+++ +GE+V L EL+ ++ +YVLL NLY+ +G WE V+++R
Sbjct: 515 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 574
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ MNE L+ GCS I L V FVV + EI + + ++ GY +
Sbjct: 575 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 634
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S H+L EEK L HSEKLA+ +G++ T GTTIRV KNLRICVDCHN AK++S V
Sbjct: 635 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 694
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC DYW
Sbjct: 695 EREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 16/255 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-----IPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
M+R +S + EE F L +M ++ +P + + C + + G +H
Sbjct: 9 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT-VLPVCAREREIGLGKGVHGW 67
Query: 56 VLRDGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
++ +LD +L+ LMD+YS A +F ++ V+WN ++ + T
Sbjct: 68 AVK--LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125
Query: 114 DALCLFDNLNREESG---CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
FD L + +G K D+VT L + C H L +++H Y + + +
Sbjct: 126 GT---FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 182
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+ +A Y+KCGSL A VF G+ K V SW+A+I G A + R ++++ M+ +G+
Sbjct: 183 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 242
Query: 231 FPDDQTFTGVLSACS 245
PD T +LSACS
Sbjct: 243 LPDSFTVCSLLSACS 257
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 276/442 (62%), Gaps = 1/442 (0%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D+ L T ++ Y +A + F+ +P R+ V+WN +++ Y++N DAL LF +
Sbjct: 222 DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMV 281
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
RE + +P+ T VL C++L AL FG++IH++ + + + SL++MY KCG
Sbjct: 282 RE-ANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 340
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A ++F M +DVV+W+AMISG A +G G++AI F M+ GV P+ TF VL+A
Sbjct: 341 LSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTA 400
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C H GL D G+ + M + +GI P + HY C+VDLL RAG L++A LI SM +P +
Sbjct: 401 CIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPS 460
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ TLL ACR++K++ E LIE Q +G YV L N+Y+ W+ V +R +M
Sbjct: 461 AYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMK 520
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ + TPG S I +KGV+HEF +D HP++ I++ L ++ +++K GYV ++ LH
Sbjct: 521 DNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLH 580
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ K L HSEKLAI+FG+++T PG T+R+ KNLR+C DCHN AKV+S + +RE+
Sbjct: 581 DVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREI 640
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
I+RD RFHHFR G CSC DYW
Sbjct: 641 ILRDTTRFHHFRGGHCSCGDYW 662
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
+V Y +S ++ LF M R+ + N S + C +L G QIH ++
Sbjct: 260 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 319
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + T+L+ +Y ACKLF E+ RD VAWN +IS Y ++ ++A+ LF
Sbjct: 320 PLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLF 379
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMY 178
+ + E G +P+ +T + VL AC H G +FG + + E +G +++ + ++ +
Sbjct: 380 ERMKDE--GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLL 437
Query: 179 SKCGSLGMAFEVFKGMP 195
+ G L A ++ + MP
Sbjct: 438 CRAGKLERAVDLIRSMP 454
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 16/272 (5%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D+ TL+ + + A +LF +P RD V+WN ++S ++ +A +F +
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
S V+ ++ A + E+ R E G L ++++ Y G+
Sbjct: 188 VRNS------VSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGN 238
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLS 242
+ A E F+ MP +++VSW+A+++G N H DA+ F M R A V P+ T + VL
Sbjct: 239 VVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLL 298
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
CS+ + G + + + N+ +V + + G L A +L M + D
Sbjct: 299 GCSNLSALGFGKQ-IHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DV 356
Query: 303 TIWRTLLGACRIH----KHVTLGERVIEHLIE 330
W ++ H + + L ER+ + +E
Sbjct: 357 VAWNAMISGYAQHGDGKEAINLFERMKDEGVE 388
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 88 FDEIPQRDTVAWNVLISCYIRN-QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
F P++ T +N L++ Y R R DA LFD + PD V+ +L
Sbjct: 89 FASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP------TPDAVSYNTLLSCHFAS 142
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G + ++ + S N++++ SK G++ A VF MP ++ VSW+AM+
Sbjct: 143 GDADGARRLFASMPVRDVVS----WNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMV 198
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A + A E F G D +T ++S G V + + + + M
Sbjct: 199 SGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMP----- 250
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGE 322
+ N+ + VV + D A +L +M V+P+++ ++L C + G+
Sbjct: 251 VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGK 310
Query: 323 RVIEHLIELKAQESGDY-VLLLNLYSSVGD 351
++ + ++L + L+++Y GD
Sbjct: 311 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 340
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 21/241 (8%)
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN-GHGRDAIESFGAMQR 227
+L +A + G L A E F P K +++ +++G A G DA F +
Sbjct: 67 SLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT 126
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
PD ++ +LS G D M + ++ + +V L ++G ++
Sbjct: 127 ----PDAVSYNTLLSCHFASGDADGARRLFASMP-----VRDVVSWNTMVSGLSKSGAVE 177
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+A + +M V+ +S W ++ + ++ E + A E GD VL + S
Sbjct: 178 EAKAVFLAMPVR-NSVSWNAMVSGFACSRDMSAAEEWFRN-----APEKGDAVLWTAMVS 231
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
D V + E+ + P + + VV +V + + + M+ E N
Sbjct: 232 GYMDIGNVVKAIEY-----FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 286
Query: 408 Q 408
Q
Sbjct: 287 Q 287
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/455 (41%), Positives = 276/455 (60%), Gaps = 5/455 (1%)
Query: 54 ARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
+RV R G LD TT++ +A LFD +P+R+ V+WN ++S Y++ R
Sbjct: 153 SRVFRGGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRF 212
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
DAL +FD + G + + AC GAL G ++HR++ + G L
Sbjct: 213 LDALEVFDEMR--ARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLAT 270
Query: 173 SLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+++ MY KCG + A+ VF+ +P K + +W+ MI G A++G G+DA++ FG M+R GV
Sbjct: 271 AVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGV 330
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PDD T VL+AC+H G++ EG + + + + +GI P + HYGC+VDL GRAG L++A
Sbjct: 331 APDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAK 390
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
++I M ++PD + L GA +IH V LGE + +IEL Q SG YVLL NL ++ G
Sbjct: 391 KVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAG 450
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
WE V +R M+E+ + G S I ++G V EF + HPR E+Y M ++ ++++
Sbjct: 451 RWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMASDMMRKIR 510
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GYV + LH + EEK L YHSEKLAIAFG+L T PG T+R+ KNLR+C DCH
Sbjct: 511 AEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHE 570
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V+ R++++RDR RFHHF++G+CSC DYW
Sbjct: 571 ATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F++MR + + N F + A+ C +L G ++H V + G
Sbjct: 202 MMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSG 261
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
Q+D +L T ++D+Y EA ++F+ +P + WN +I + + R +DAL L
Sbjct: 262 IQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKL 321
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAM 177
F + RE G PDDVT + VL ACAH G L G Y+ + +G KM ++ +
Sbjct: 322 FGRMERE--GVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDL 379
Query: 178 YSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
Y + G L A +V + MP E DV A+ ++G
Sbjct: 380 YGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHG 416
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 35/265 (13%)
Query: 130 KPDDVTCLLVLQAC------AHLGALEFGEKIHRYISE---------------------H 162
+PD T +L + A L AL H +
Sbjct: 98 RPDHFTFPQILPSAQPLHLVAQLHALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFR 157
Query: 163 GYGSKMNLCN--SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
G G +++ + +++ K G A +F GMPE+++VSW+AM+SG DA+E
Sbjct: 158 GGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALE 217
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
F M+ GV + + AC+ G + G + R + GI + VVD+
Sbjct: 218 VFDEMRARGVDGNVFVAATAVVACTGAGALARGRE-VHRWVEQSGIQMDEKLATAVVDMY 276
Query: 281 GRAGLLDQAYQLITSMGVKPDS-TIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGD 338
+ G +++A+++ ++ + T W ++G +H G+ ++ ++ + + D
Sbjct: 277 CKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGR---GQDALKLFGRMEREGVAPD 333
Query: 339 YVLLLNLYSSVGDWEKVKELREFMN 363
V L+N+ ++ + E R + N
Sbjct: 334 DVTLVNVLTACAHAGMLSEGRHYFN 358
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 276/442 (62%), Gaps = 1/442 (0%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D+ L T ++ Y +A + F+ +P R+ V+WN +++ Y++N DAL LF +
Sbjct: 173 DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMV 232
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
RE + +P+ T VL C++L AL FG++IH++ + + + SL++MY KCG
Sbjct: 233 RE-ANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 291
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A ++F M +DVV+W+AMISG A +G G++AI F M+ GV P+ TF VL+A
Sbjct: 292 LSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTA 351
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C H GL D G+ + M + +GI P + HY C+VDLL RAG L++A LI SM +P +
Sbjct: 352 CIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPS 411
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ TLL ACR++K++ E LIE Q +G YV L N+Y+ W+ V +R +M
Sbjct: 412 AYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMK 471
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ + TPG S I +KGV+HEF +D HP++ I++ L ++ +++K GYV ++ LH
Sbjct: 472 DNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLH 531
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ K L HSEKLAI+FG+++T PG T+R+ KNLR+C DCHN AKV+S + +RE+
Sbjct: 532 DVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREI 591
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
I+RD RFHHFR G CSC DYW
Sbjct: 592 ILRDTTRFHHFRGGHCSCGDYW 613
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
+V Y +S ++ LF M R+ + N S + C +L G QIH ++
Sbjct: 211 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 270
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + T+L+ +Y ACKLF E+ RD VAWN +IS Y ++ ++A+ LF
Sbjct: 271 PLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLF 330
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMY 178
+ + E G +P+ +T + VL AC H G +FG + + E +G +++ + ++ +
Sbjct: 331 ERMKDE--GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLL 388
Query: 179 SKCGSLGMAFEVFKGMP 195
+ G L A ++ + MP
Sbjct: 389 CRAGKLERAVDLIRSMP 405
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 16/272 (5%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D+ TL+ + + A +LF +P RD V+WN ++S ++ +A +F +
Sbjct: 79 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
S V+ ++ A + E+ R E G L ++++ Y G+
Sbjct: 139 VRNS------VSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGN 189
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLS 242
+ A E F+ MP +++VSW+A+++G N H DA+ F M R A V P+ T + VL
Sbjct: 190 VVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLL 249
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
CS+ + G + + + N+ +V + + G L A +L M + D
Sbjct: 250 GCSNLSALGFGKQ-IHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DV 307
Query: 303 TIWRTLLGACRIH----KHVTLGERVIEHLIE 330
W ++ H + + L ER+ + +E
Sbjct: 308 VAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 88 FDEIPQRDTVAWNVLISCYIRN-QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
F P++ T +N L++ Y R R DA LFD + PD V+ +L
Sbjct: 40 FASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP------TPDAVSYNTLLSCHFAS 93
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G + ++ + S N++++ SK G++ A VF MP ++ VSW+AM+
Sbjct: 94 GDADGARRLFASMPVRDVVS----WNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMV 149
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A + A E F G D +T ++S G V + + + + M
Sbjct: 150 SGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMP----- 201
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGE 322
+ N+ + VV + D A +L +M V+P+++ ++L C + G+
Sbjct: 202 VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGK 261
Query: 323 RVIEHLIELKAQESGDY-VLLLNLYSSVGD 351
++ + ++L + L+++Y GD
Sbjct: 262 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 291
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 21/241 (8%)
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN-GHGRDAIESFGAMQR 227
+L +A + G L A E F P K +++ +++G A G DA F +
Sbjct: 18 SLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT 77
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
PD ++ +LS G D M + ++ + +V L ++G ++
Sbjct: 78 ----PDAVSYNTLLSCHFASGDADGARRLFASMP-----VRDVVSWNTMVSGLSKSGAVE 128
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+A + +M V+ +S W ++ + ++ E + A E GD VL + S
Sbjct: 129 EAKAVFLAMPVR-NSVSWNAMVSGFACSRDMSAAEEWFRN-----APEKGDAVLWTAMVS 182
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
D V + E+ + P + + VV +V + + + M+ E N
Sbjct: 183 GYMDIGNVVKAIEY-----FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 237
Query: 408 Q 408
Q
Sbjct: 238 Q 238
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 292/528 (55%), Gaps = 33/528 (6%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P +G +F +M + NP S + C + L G +IH +R G ++ + +
Sbjct: 246 PRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSA 305
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR------ 124
L+ LY+ EA +FD +P RD V+WN +++ Y +N+ LF ++R
Sbjct: 306 LVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRAD 365
Query: 125 ---------------------------EESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
++ G KP+++T +L AC+ L G++IH
Sbjct: 366 EATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHC 425
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
Y+ H + +L+ MY+KCG L ++ VF M KDVV+W+ MI AM+G+G++
Sbjct: 426 YVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKE 485
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+ F M + V P+ TFTGVLS CSH LV+EG+ + M +D + P+ +HY CVV
Sbjct: 486 ALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV 545
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
D+ RAG L++AY+ I M ++P ++ W LL ACR++K+V L + + L E++ G
Sbjct: 546 DIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPG 605
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
+YV L N+ + W + ++R M E+G+ TPGCS + + VH FVV D S+ ++
Sbjct: 606 NYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDK 665
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIR 457
IY LDE+ +++K+AGY + L ++ EEK +L HSEKLA+AFG+L +TIR
Sbjct: 666 IYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIR 725
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V KNLRIC DCHN K +S V +++RD LRFHHF+ G CSC D W
Sbjct: 726 VFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 40/368 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A + E ++ ++++ I + A K C + ++H R G
Sbjct: 135 LISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG 194
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+ Y + A ++FD++ RD V+W L SCY++ R + +F
Sbjct: 195 VMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFR 254
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG KP+ +T +L ACA L L+ G++IH + HG + +C++L+++Y+K
Sbjct: 255 EMG--WSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAK 312
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C S+ A VF MP +DVVSW+ +++ N F M R GV D+ T+ V
Sbjct: 313 CLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAV 372
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ C G +E + +M K MG KP
Sbjct: 373 IGGCMENGRSEEAVEMFRKMQK---------------------------------MGFKP 399
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY---VLLLNLYSSVGDWEKVKE 357
+ ++L AC +++ +G+ + H + + GD LL +Y+ GD +
Sbjct: 400 NEITISSILPACSFSENLRMGKEI--HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRN 457
Query: 358 LREFMNEK 365
+ + M K
Sbjct: 458 VFDMMRRK 465
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 35/263 (13%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
A +LFD IPQ D + LIS + + +A+ ++ +L +E G KPD L +A
Sbjct: 116 RARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSL--QERGIKPDMPVFLAAAKA 173
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA G +++H + G S + + N+LI Y KC + A VF + +DVVSW
Sbjct: 174 CAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSW 233
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVD 251
+++ S G R ++ F M +GV P+ T + +L AC+ H V
Sbjct: 234 TSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVR 293
Query: 252 EGM---MFL----------------DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
GM +F+ RM D ++ + V+ + ++ + L
Sbjct: 294 HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSL 353
Query: 293 ITSM---GVKPDSTIWRTLLGAC 312
M GV+ D W ++G C
Sbjct: 354 FLKMSRDGVRADEATWNAVIGGC 376
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A +M + +E +LF+KM R+ N + + C + G+QI + RD
Sbjct: 473 MIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDH 532
Query: 61 -YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV-AWNVLIS 104
+ D+ + ++D+YS + EA K +P T AW L++
Sbjct: 533 LVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 578
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 301/540 (55%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ E +F KM + F + A+ C +L G QIHA ++R
Sbjct: 248 MISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT 307
Query: 60 GY---------------------------------QLDSQLMTTLMDLYSTFEKSFEACK 86
+ LD T L+D Y A +
Sbjct: 308 EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARR 367
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD + RD VAW +I Y++N +DA+ LF ++ +E G KP++ T +L + L
Sbjct: 368 IFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKE--GPKPNNYTLATMLSVSSSL 425
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAM 205
+L+ G +IH + G S +++ N+LI MY+K GS+ A VF + ++D ++W++M
Sbjct: 426 ASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I LA +G G +A+ F M G+ PD T+ GVLSAC+H GLV++G + + M
Sbjct: 486 IIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHK 545
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P HY C++DL GRAGLL +A+ I +M ++PD W +LL +C++HK+V L E
Sbjct: 546 IIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAA 605
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L+ ++ + SG Y L N+YS+ G WE +R+ M +KG++ G S + +K VH F
Sbjct: 606 ERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIF 665
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
VDD HP+ + IY+M+ +I K++K G+V + S LH+L E K LS+HSEKLAIAF
Sbjct: 666 GVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAF 725
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G++ TP TT+R+ KNLR+C DCH+ K +S + RE+I+RD RFHHF+ G CSC DYW
Sbjct: 726 GLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 63/281 (22%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P++P+ SF ++ +KF G IHAR+++ G L LM LM+ Y+ ++A +
Sbjct: 12 PSDPY-TSF-LQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHR 69
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES------------------- 127
+FDE+P + +WN+++S Y + R +A +F+ + +S
Sbjct: 70 VFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENA 129
Query: 128 ----------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
P T VL +CA + L G K+H ++ +HG S +++ NSL+ M
Sbjct: 130 IGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNM 189
Query: 178 YSKCGS-------------------------------LGMAFEVFKGMPEKDVVSWSAMI 206
Y+K G + +A F+ M E+DVVSW+AMI
Sbjct: 190 YAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMI 249
Query: 207 SGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSH 246
SG +G R+A++ F M + PD T LSAC++
Sbjct: 250 SGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACAN 290
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 192/440 (43%), Gaps = 74/440 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E +F +M +P F + + C L G ++H+ V++ G
Sbjct: 116 MIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHG 175
Query: 61 YQLDSQLMTTLMDLYS------TFEKSFEACKL-------------------------FD 89
+ +L+++Y+ T + F+ KL F+
Sbjct: 176 LSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFE 235
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++ +RD V+WN +IS Y ++ R+AL +F + +S KPD T L ACA+L L
Sbjct: 236 QMIERDVVSWNAMISGYNQHGFDREALDIFSKM-LMDSSSKPDKFTLASALSACANLENL 294
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE-------------------- 189
+ G++IH +I + + + N+LI+MYSK G + +A +
Sbjct: 295 KLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLD 354
Query: 190 -------------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+F + +DVV+W+AMI G NG +DA+E F +M + G P++ T
Sbjct: 355 GYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYT 414
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+LS S +D G ++ G ++ ++ + ++G ++ A + +
Sbjct: 415 LATMLSVSSSLASLDHGRQIHASATRS-GNASSVSVSNALITMYAKSGSINDARWVFNLI 473
Query: 297 GVKPDSTIWRTLLGACRIH----KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
K D+ W +++ A H + +TL ER++E+ I+ + YV +L+ + VG
Sbjct: 474 HWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIK---PDHITYVGVLSACTHVGLV 530
Query: 353 EKVKELREFM-NEKGLQTTP 371
E+ + M N + TP
Sbjct: 531 EQGRSYYNLMQNAHKIIPTP 550
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/457 (39%), Positives = 284/457 (62%), Gaps = 2/457 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+HA+ L+ +L+ + + L+D+Y + +A + F+ +P+++ V+W +++ Y +
Sbjct: 228 GAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQ 287
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N+ DAL LF L+ E G +P++ T + L +CA L AL G + + + G+ +
Sbjct: 288 NELYEDALQLF--LDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHL 345
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+L+ MYSK GS+ A VF MP +DVVSW+ +I+G A +G R+ +E+F +M A
Sbjct: 346 LVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSA 405
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
V P TF GVLSAC+ GLVDE +L+ M K+ GI P HY C+V LL R G LD+
Sbjct: 406 AVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDE 465
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A + I + + D WR+LL +C+++K+ LG RV E +++L+ + G YVLL N+Y+
Sbjct: 466 AERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAK 525
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W+ V ++R+ M E+ ++ +PG S I + VH F ++ HP++++I + L+E+ Q
Sbjct: 526 ANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQ 585
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K GYV LH++ E K L YHSEKLA+AFG++ TP G TI + KNLRIC DC
Sbjct: 586 IKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDC 645
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K++S V +R++++RD +RFH G CSCNDYW
Sbjct: 646 HVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 163/374 (43%), Gaps = 11/374 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S +E L +R N + S A+ S G Q H ++ G
Sbjct: 82 LMSGYASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ +Y +A K+F+ + D A+N +I+ Y+ + +L +
Sbjct: 139 FAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVR 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ E K D V+ + VL CA + G ++H + + + ++L+ MY K
Sbjct: 199 NMTGEAE--KWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGK 256
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C + A F+ +PEK+VVSW+A+++ N DA++ F M+ GV P++ T+
Sbjct: 257 CDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVA 316
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L++C+ + G + K G ++ ++++ ++G ++ A+++ SM ++
Sbjct: 317 LNSCAGLAALRTGNALGACVMKT-GHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLR- 374
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D W ++ H G + L A YV + + S+ V E
Sbjct: 375 DVVSWNLIITGYAHHGLAREGMEAFHSM--LSAAVIPSYVTFVGVLSACAQLGLVDEAFY 432
Query: 361 FMNE--KGLQTTPG 372
++N K + TPG
Sbjct: 433 YLNTMMKEVGITPG 446
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + E+ LF M + + N F + A+ C +L G + A V++ G
Sbjct: 281 VMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTG 340
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LM++YS +A ++F +P RD V+WN++I+ Y + R+ + F
Sbjct: 341 HWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFH 400
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGAL-EFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++ + P VT + VL ACA LG + E ++ + E G ++ +
Sbjct: 401 SM--LSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLC 458
Query: 180 KCGSLGMAFE-VFKGMPEKDVVSWSAMIS 207
+ G L A + DVV+W ++++
Sbjct: 459 RVGRLDEAERFIVNNCIGTDVVAWRSLLN 487
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 126/300 (42%), Gaps = 39/300 (13%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
L G +HAR++ + D L L+ Y+ + A +FD +P R+ V+ N+L+S
Sbjct: 27 LSKGKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y + R +++L L ++ ++ + A A++ + + G + H Y + G+
Sbjct: 86 YASSGRHKESLQLLRVVD-----FGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ + N+++ MY +C + A +VF+ + D ++++MI+G G ++ M
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNM 200
Query: 226 QRAGVFPDDQTFTGVLSACS-----------HCGLVDE--------GMMFLDRMSK---- 262
D ++ VL C+ H + + G +D K
Sbjct: 201 TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHV 260
Query: 263 -----DFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
F +LP N+ + V+ + L + A QL M GV+P+ + L +C
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 147 GALEFGEKIH-RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
G L G+ +H R I+ + + L N+LI+ Y+KCG +G+A VF MP ++ VS + +
Sbjct: 25 GDLSKGKALHARLITAAHF--DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLL 82
Query: 206 ISGLAMNGHGRDAIE 220
+SG A +G +++++
Sbjct: 83 MSGYASSGRHKESLQ 97
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + +P+E +F+KM + + + A+ C L G IH +
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELE 367
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ +L+ +Y ++ A +F ++ R V+WN +I + +N R +AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFS 427
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + KPD T + V+ A A L + IH + + + + +L+ MY+K
Sbjct: 428 QM--QARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAK 485
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ +A +F M E+ V +W+AMI G +G G+ A+E F MQ+ + P+ TF V
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSV 545
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SACSH GLV+ G+ M +++ I P++ HYG +VDLLGRAG L++A+ I M VKP
Sbjct: 546 ISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +LGAC+IHK+V E+V E L EL ++ G +VLL N+Y + WEKV ++R
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +GL+ TPGCS + +K VH F +HP +IY L+++ Q+K AGYV + T+
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPD-TN 724
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ L + K LS HSEKLAI+FG+L T GTTI V KNLR+C DCHN K +S V
Sbjct: 725 LILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTG 784
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 785 REIIVRDMQRFHHFKNGACSCGDYW 809
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 158/292 (54%), Gaps = 3/292 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ ++ S ++ F +MR + + ++ +K C L G +IH +++ G
Sbjct: 106 MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD MT L ++Y+ + EA K+FD +P+RD V+WN +++ Y +N R AL +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV- 224
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
NL EE+ KP +T + VL A + L + G++IH Y G+ S +N+ +L+ MY+K
Sbjct: 225 NLMCEEN-LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAK 283
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F GM E++VVSW++MI N + ++A+ F M GV P D + G
Sbjct: 284 CGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGA 343
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
L AC+ G ++ G F+ ++S + + N+ ++ + + +D A +
Sbjct: 344 LHACADLGDLERG-RFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
>gi|77553572|gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 605
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/450 (41%), Positives = 273/450 (60%), Gaps = 9/450 (2%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC------ 117
D L L+ +++ + ++FD I D AWN L+S Y R R RD C
Sbjct: 157 DRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYAR-LRARDVACATSAAD 215
Query: 118 -LFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ + R S +P+++T + V+ AC LGA+ G H Y + + +L+
Sbjct: 216 AILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALV 275
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+ CG L +A +VF ++D ++AM+ GLA++GHGR A+ M AGV D
Sbjct: 276 EMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGV 335
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T V+ AC+H GLVDEG+ + DRM +FGI P I HYGC++D+L RAG L+ A +LI
Sbjct: 336 TVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHE 395
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M + P++ I+R+L+ AC IH + LGE++I L+ L+ +SG++VL+ N Y+ WE
Sbjct: 396 MLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDA 455
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
K+ R+ M G+ PG S + + GV+HEF+V D +HP EIY M++EI +L G
Sbjct: 456 KKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRR 515
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ +S L ++ E+K + LSYHSE+LAIAF ++A+ PG IR+ KNLR+C DCH AK++
Sbjct: 516 SSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLV 575
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S VY RE+++RDR RFHHFR+G CSC D+W
Sbjct: 576 SRVYGREIVMRDRTRFHHFRDGVCSCGDFW 605
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 3/188 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
+S+ + LF +M I N I C + ++ G+ H ++ ++ +
Sbjct: 211 TSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIV 270
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T L+++Y+ + A ++F RDT +N ++ + R AL L D ++ +
Sbjct: 271 ATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMH--GA 328
Query: 128 GCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G D VT L V+ ACAH G ++ G + R E G ++ +I M S+ G L
Sbjct: 329 GVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNN 388
Query: 187 AFEVFKGM 194
A ++ M
Sbjct: 389 AEKLIHEM 396
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG-------- 208
+++ H L +L+ ++++CG + VF + D+ +W+A++S
Sbjct: 147 KFLGAHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLRARD 206
Query: 209 LAMNGHGRDAI-ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
+A DAI E F M + P++ T V+ AC G V G ++ + +
Sbjct: 207 VACATSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHG-VWAHTYAVKRRLA 265
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
N +V++ G LD A Q+ + + D+ + +L +H H
Sbjct: 266 VNCIVATALVEMYAGCGRLDLAEQVFAAASDR-DTRCYNAMLHGLAVHGH 314
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 297/536 (55%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y + ++ LFE MR + + + C +L G IH V +G
Sbjct: 193 IIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNG 252
Query: 61 YQLDSQLMTTLMDLYST------FEKSFEACK-------------------------LFD 89
Y +DS L T L+++Y+ K ++ +FD
Sbjct: 253 YAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFD 312
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++ +RD V W+ +IS Y + + ++AL LFD + ++ S PD +T L V+ AC+H+GAL
Sbjct: 313 QMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRS--VPDQITMLSVISACSHVGAL 370
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
IH Y+ G+G +++ N+LI MY+KCG+L A EVF+ MP K+V+SWS+MI+
Sbjct: 371 AQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAF 430
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G+ AI+ F M+ + P+ TF GVL AC H GLV+EG M + GI P
Sbjct: 431 AMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPT 490
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HYGC+VDL RA L +A +LI +M P+ IW +L+ AC++H LGE + L+
Sbjct: 491 REHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLL 550
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ G V+L N+Y+ W V +R+ M+ KG+ S I + VH F++ D
Sbjct: 551 ELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMAD 610
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H + +EIY+ LDE+ +LK+ GY + L +L E+K + +HSEKLA+ +G+++
Sbjct: 611 RYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLIS 670
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ IR+ KNLRIC DCH+F K++S VY E+++RDR RFHH G CSC DYW
Sbjct: 671 RRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 195/409 (47%), Gaps = 48/409 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R S SS PE+ +L+ +R + F+ +K K + GL+IH +
Sbjct: 91 LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ D + T L+ +Y++ + +A LFD++ D VAWN++I Y +N DAL LF
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+++ S KPD V VL AC H G L +G IH ++ ++GY +L +LI MY+
Sbjct: 211 EDM--RSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 180 KCGSLGMAFEVFKG-------------------------------MPEKDVVSWSAMISG 208
CG++ +A +++ G M E+D+V WSAMISG
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG---MMFLDRMSKDFG 265
A + ++A++ F M + PD T V+SACSH G + + ++DR FG
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDR--SGFG 386
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+++ ++D+ + G L +A ++ +M K + W +++ A +H + ++
Sbjct: 387 RALSVN--NALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLF 443
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKE----LREFMNEKGLQTT 370
+ E+ + +G V + + + G V+E +NE G+ T
Sbjct: 444 RRMKEVNIEPNG--VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPT 490
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 293/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S E+ F +F +M + + N F+ S ++ C L G QIH V++ G
Sbjct: 323 LISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLG 382
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + LMD+Y+ + ++F + + V+WN +I Y ++ DAL +F
Sbjct: 383 YESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQ 442
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + VT VL+ACA+ +++ +IH I + + + +CNSLI Y+K
Sbjct: 443 EM--RAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAK 500
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +VF+ + + DVVSW+A+ISG A++G DA+E F M ++ P+D TF +
Sbjct: 501 CGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVAL 560
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS C GLV++G+ + M+ D I P++ HY C+V LLGRAG L+ A + I + P
Sbjct: 561 LSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTP 620
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WR LL +C +HK+V LG+ E ++E++ Q+ YVLL N+Y++ G ++V LR+
Sbjct: 621 SPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRK 680
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ G S + +KG VH F V HP + I ML+ +N + GYV +I
Sbjct: 681 SMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINV 740
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EEK L HSE+LA+A+G+ TPPG IR+ KNLR C+DCH KV+S +
Sbjct: 741 VLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQ 800
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF EG CSC DYW
Sbjct: 801 REIVVRDINRFHHFDEGICSCGDYW 825
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V+ Y++ EE LF +++++ N F + +K + + IHA + G
Sbjct: 121 LVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLG 180
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + ++L+D YS A +FD I +D V W ++SCY N DAL F
Sbjct: 181 HDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFS 240
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G KP+ VL+A L + G+ IH + ++ ++ +L+ MY+K
Sbjct: 241 KM--RMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAK 298
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A VF+ +P DV+ WS +IS A + A E F M R+ V P++ + +GV
Sbjct: 299 CGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGV 358
Query: 241 LSACSHCGLVDEG 253
L AC++ +D G
Sbjct: 359 LQACANVAFLDLG 371
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 5/231 (2%)
Query: 16 YLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDG--YQLDSQLMTTLM 72
+L +++ +P + +AC+ ++ C+ G +HARV++ G QLD+ L+
Sbjct: 32 WLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLL 91
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+LY+ A +LFD +P+R+ V++ L+ Y +A LF L RE G + +
Sbjct: 92 NLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQRE--GHEVN 149
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+L+ + A IH + G+ + +SLI YS CG++ A VF
Sbjct: 150 HFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFD 209
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
G+ KD V+W+AM+S + N DA+ +F M+ AG P+ T VL A
Sbjct: 210 GIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/455 (41%), Positives = 275/455 (60%), Gaps = 5/455 (1%)
Query: 54 ARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
+RV R G LD TT++ +A LFD +P+R+ V+WN ++S Y++ R
Sbjct: 153 SRVFRGGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRF 212
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
DAL +FD + G + + AC GAL G ++HR++ + G L
Sbjct: 213 LDALEVFDEMR--ARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLAT 270
Query: 173 SLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+++ MY KCG + A+ VF+ +P K + +W+ MI G A++G G DA++ FG M+R GV
Sbjct: 271 AVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMEREGV 330
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PDD T VL+AC+H G++ EG + + + + +GI P + HYGC+VDL GRAG L++A
Sbjct: 331 APDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAK 390
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
++I M ++PD + L GA +IH V LGE + +IEL Q SG YVLL NL ++ G
Sbjct: 391 KVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAG 450
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
WE V +R M+E+ + G S I ++G V EF + HPR E+Y M ++ ++++
Sbjct: 451 RWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMARDMMREIR 510
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GYV + LH + EEK L YHSEKLAIAFG+L T PG T+R+ KNLR+C DCH
Sbjct: 511 AEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHE 570
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V+ R++++RDR RFHHF++G+CSC DYW
Sbjct: 571 ATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 6/217 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F++MR + + N F + A+ C +L G ++H V + G
Sbjct: 202 MMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSG 261
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
Q+D +L T ++D+Y EA ++F+ +P + WN +I + + R DAL L
Sbjct: 262 IQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKL 321
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAM 177
F + RE G PDDVT + VL ACAH G L G Y+ + +G KM ++ +
Sbjct: 322 FGRMERE--GVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDL 379
Query: 178 YSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
Y + G L A +V + MP E DV A+ ++G
Sbjct: 380 YGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHG 416
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 35/265 (13%)
Query: 130 KPDDVTCLLVLQAC------AHLGALEFGEKIHRYISE---------------------H 162
+PD T +L + A L AL H +
Sbjct: 98 RPDHFTFPQILPSAQPLHLVAQLHALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFR 157
Query: 163 GYGSKMNLCN--SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIE 220
G G +++ + +++ K G A +F GMPE+++VSW+AM+SG DA+E
Sbjct: 158 GGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALE 217
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
F M+ GV + + AC+ G + G + R + GI + VVD+
Sbjct: 218 VFDEMRARGVDGNVFVAATAVVACTGAGALARGRE-VHRWVEQSGIQMDEKLATAVVDMY 276
Query: 281 GRAGLLDQAYQLITSMGVKPDS-TIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGD 338
+ G +++A+++ ++ + T W ++G +H GE ++ ++ + + D
Sbjct: 277 CKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGR---GEDALKLFGRMEREGVAPD 333
Query: 339 YVLLLNLYSSVGDWEKVKELREFMN 363
V L+N+ ++ + E R + N
Sbjct: 334 DVTLVNVLTACAHAGMLSEGRHYFN 358
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 268/444 (60%), Gaps = 4/444 (0%)
Query: 64 DSQLMTTLMDL--YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D+ M +L + Y++ E +F+ + +++ ++WNV+I+ Y+ N +A+ LF
Sbjct: 237 DAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLF-- 294
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
L EE G KPD VT +L AC L AL G ++H+YI + + L N+L+ MY+KC
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKC 354
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF M +DVVSW++M+S +G G DA+ F M +G PD F VL
Sbjct: 355 GCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SACSH GL+D+G + M++ +GI+P I H+ C+VDL GRAG +++AY I M ++P+
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPN 474
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+W LL ACR+H + +G + L +L ++SG YVLL N+Y+ G W+ V +R
Sbjct: 475 ERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYA 534
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M + G++ PG S + L G VH F+ D HP+ IY LD + ++K GY+ + S
Sbjct: 535 MKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESA 594
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNR 481
LH++ E+K L+ HSEKLAI F +L T GT IR+ KNLR+C DCH K++S + +R
Sbjct: 595 LHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSR 654
Query: 482 EVIIRDRLRFHHFREGRCSCNDYW 505
+I+RD RFHHF G CSC DYW
Sbjct: 655 NIIVRDCNRFHHFSNGICSCGDYW 678
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 38/353 (10%)
Query: 51 QIHAR-VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN 109
++H++ V+ + ++D L LM YS ++ A +FD +++ V +NV+I Y+ N
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+AL +F + PD T VL+AC+ L L G ++H I + G + +
Sbjct: 116 NLYVEALSIFQVM--LSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLF 173
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N+L+AMY KCG L A +V MP +DVVSW++M++G A +G DA+E M
Sbjct: 174 IGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLN 233
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMM--FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+ D T + + L + + +RM+K N+ + ++ + + +
Sbjct: 234 LNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKK-----NLISWNVMIAIYVNNSMPN 288
Query: 288 QAYQLITSM---GVKPDSTIWRTLLGAC----------RIHKHVTLGERVIEHLIELKAQ 334
+A L M G+KPD+ +LL AC R+HK++ G L+E
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENA-- 346
Query: 335 ESGDYVLLLNLYSSVGDWEKVKE------LREFMNEKGLQTTPGCSTIGLKGV 381
LL++Y+ G E+ ++ LR+ ++ + + G S G V
Sbjct: 347 -------LLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAV 392
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 45/315 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y ++ E +F+ M + + +K C +L GLQ+H +++ G
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG 167
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +Y EA K+ D++P RD V+WN +++ Y ++ + DA
Sbjct: 168 LDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA----- 222
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L+ C + +L H G+ +L S + Y+
Sbjct: 223 -------------------LEICKEMDSLNLN---------HDAGTMASL--SPVVCYTS 252
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
++ +F+ M +K+++SW+ MI+ N +A+ F M+ G+ PD T +
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 241 LSACSHCGLVDEGMMFLDRMSKDF----GILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L AC D +FL R + + PN+ ++D+ + G L++A + M
Sbjct: 313 LPACG-----DLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 297 GVKPDSTIWRTLLGA 311
++ D W +++ A
Sbjct: 368 RLR-DVVSWTSMMSA 381
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 275/437 (62%), Gaps = 2/437 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
+L+ +Y+ + +A K FD + +++ V++N ++ Y +N ++ +A LF+ + ++G
Sbjct: 63 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI--ADTG 120
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
T +L A +GA+ GE+IH + + GY S +CN+LI+MYS+CG++ AF
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+VF M +++V+SW++MI+G A +G A+E F M G P++ T+ VLSACSH G
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
++ EG + M K+ GI+P + HY C+VDLLGR+GLL +A + I SM + D+ +WRTL
Sbjct: 241 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 300
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
LGACR+H + LG E ++E + + Y+LL NL++S G W+ V ++R+ M E+ L
Sbjct: 301 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 360
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
GCS I ++ VH F V + SHP+ +IYQ LD++ ++K GY+ + LH++ E
Sbjct: 361 KEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEE 420
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
+K L HSEK+A+AFG+++T IR+ KNLR+C DCH K +S RE+++RD
Sbjct: 421 QKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDS 480
Query: 489 LRFHHFREGRCSCNDYW 505
RFHH + G CSCNDYW
Sbjct: 481 NRFHHIKNGVCSCNDYW 497
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 12/247 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ + EE F LF ++ I + F + + ++ G QIH R+L+ G
Sbjct: 96 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 155
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + L+ +YS A ++F+E+ R+ ++W +I+ + ++ AL +F
Sbjct: 156 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 215
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ E+G KP+++T + VL AC+H+G + G+K + EHG +M ++ +
Sbjct: 216 KM--LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 273
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQRAGVFPDDQ 235
+ G L A E MP D + W ++ ++G+ GR A E + PDD
Sbjct: 274 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE-----PDDP 328
Query: 236 TFTGVLS 242
+LS
Sbjct: 329 AAYILLS 335
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 177 MYSKC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAGVFP 232
MY+KC GS+ + +VF+ MPE +V+SW+A+I+ +G ++AIE F M A V
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASV-- 58
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ ++S + G +++ R + D N+ Y +VD + ++A+ L
Sbjct: 59 -NCVGNSLISMYARSGRMEDA-----RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 112
Query: 293 ---ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLY 346
I G+ + + +LL + GE++ L LK + + L+++Y
Sbjct: 113 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICNALISMY 170
Query: 347 SSVGDWEKVKELREFMNEKGL 367
S G+ E ++ M ++ +
Sbjct: 171 SRCGNIEAAFQVFNEMEDRNV 191
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 268/444 (60%), Gaps = 4/444 (0%)
Query: 64 DSQLMTTLMDL--YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D+ M +L + Y++ E +F+ + +++ ++WNV+I+ Y+ N +A+ LF
Sbjct: 237 DAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLF-- 294
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
L EE G KPD VT +L AC L AL G ++H+YI + + L N+L+ MY+KC
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKC 354
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF M +DVVSW++M+S +G G DA+ F M +G PD F VL
Sbjct: 355 GCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
SACSH GL+D+G + M++ +GI+P I H+ C+VDL GRAG +++AY I M ++P+
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPN 474
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+W LL ACR+H + +G + L +L ++SG YVLL N+Y+ G W+ V +R
Sbjct: 475 ERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYA 534
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M + G++ PG S + L G VH F+ D HP+ IY LD + ++K GY+ + S
Sbjct: 535 MKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESA 594
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNR 481
LH++ E+K L+ HSEKLAI F +L T GT IR+ KNLR+C DCH K++S + +R
Sbjct: 595 LHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSR 654
Query: 482 EVIIRDRLRFHHFREGRCSCNDYW 505
+I+RD RFHHF G CSC DYW
Sbjct: 655 NIIVRDCNRFHHFSNGICSCGDYW 678
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 183/400 (45%), Gaps = 44/400 (11%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPF---ACSFAIKCCMKFCSLMGGLQIHAR-VLRDGYQ 62
++S+ GF ++R R+ F AC + ++ + ++H++ V+ + +
Sbjct: 12 LNSNKFRGFVSLTRIRFDRLKVEVFSKEACEVILD---QYPGIKTLNKLHSKIVINEHLR 68
Query: 63 LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
+D L LM YS ++ A +FD +++ V +NV+I Y+ N +AL +F +
Sbjct: 69 IDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVM 128
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
PD T VL+AC+ L L G ++H I + G + + + N+L+AMY KCG
Sbjct: 129 --LSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCG 186
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
L A +V MP +DVVSW++M++G A +G DA+E M + D T +
Sbjct: 187 CLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSP 246
Query: 243 ACSHCGLVDEGMM--FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---G 297
+ L + + +RM+K N+ + ++ + + ++A L M G
Sbjct: 247 VVCYTSLENVQYIHNMFERMTKK-----NLISWNVMIAIYVNNSMPNEAVSLFLQMEECG 301
Query: 298 VKPDSTIWRTLLGAC----------RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+KPD+ +LL AC R+HK++ G L+E LL++Y+
Sbjct: 302 MKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENA---------LLDMYA 352
Query: 348 SVGDWEKVKE------LREFMNEKGLQTTPGCSTIGLKGV 381
G E+ ++ LR+ ++ + + G S G V
Sbjct: 353 KCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAV 392
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 45/315 (14%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y ++ E +F+ M + + +K C +L GLQ+H +++ G
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG 167
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+ +Y EA K+ D++P RD V+WN +++ Y ++ + DA
Sbjct: 168 LDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA----- 222
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L+ C + +L H G+ +L S + Y+
Sbjct: 223 -------------------LEICKEMDSLNLN---------HDAGTMASL--SPVVCYTS 252
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
++ +F+ M +K+++SW+ MI+ N +A+ F M+ G+ PD T +
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 241 LSACSHCGLVDEGMMFLDRMSKDF----GILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L AC D +FL R + + PN+ ++D+ + G L++A + M
Sbjct: 313 LPACG-----DLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 297 GVKPDSTIWRTLLGA 311
++ D W +++ A
Sbjct: 368 RLR-DVVSWTSMMSA 381
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/453 (38%), Positives = 276/453 (60%), Gaps = 2/453 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+HA ++++ ++ + T L+D+Y+ +A F+ + RD W V+I+ Y +
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ AL F + +E G KP++ T L C+ L +LE G+++H + + G+ S M
Sbjct: 595 TNQGEKALNYFRQMQQE--GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDM 652
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ ++L+ MY+KCG + A +F+ + +D ++W+ +I G A NG G A+ +F M
Sbjct: 653 FVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDE 712
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ PD TFTG+LSACSH GLV+EG + M +DFGI P + H C+VD+LGR G D+
Sbjct: 713 GISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDE 772
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
I M + ++ IW T+LGA ++H ++ LGE+ L EL+ +E Y+LL N++++
Sbjct: 773 LEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFAT 832
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
G W+ VK +R M+ KG++ PGCS + G VH FV D SHP+I EI+ LDE++++
Sbjct: 833 EGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRE 892
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
L YV + LHN+G EK L +HSE+LA+ F +++T IR+ KNLRIC DC
Sbjct: 893 LASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDC 952
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
H+ K +S + N+E+++RD RFHHF+ G CSC
Sbjct: 953 HDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 13 EGF-----YLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
EGF YLF++M+ + I N F + +K C +L G Q+HA+ + G LD +
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+ L+DLY+ + A K+F +P+++ V WNVL++ Y + L LF ++ +
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
C ++ T VL+ CA+ L+ G+ IH I + GY + L+ MYSKCG A
Sbjct: 311 KC--NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VFK + + D+V WSA+I+ L G ++I+ F M+ P+ T +LSA ++
Sbjct: 369 IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
G + G + K +G ++ +V + + G + +L SM V D W
Sbjct: 429 GNLQYGQSIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNA 486
Query: 308 LLGA 311
L
Sbjct: 487 YLSG 490
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 4/298 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF MR N + + +L G IHA V + G++ D + L
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y + KL++ + RD ++WN +S L +F ++ E G P
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHM--LEEGFIP 514
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ T + +L +C+ L + +G ++H +I ++ +C +LI MY+KC L A F
Sbjct: 515 NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ +D+ +W+ +I+ A G A+ F MQ+ GV P++ T G LS CS ++
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G L M G + ++ +VD+ + G +++A L ++ ++ D+ W T++
Sbjct: 635 GGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 168/341 (49%), Gaps = 14/341 (4%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
IH +++D DS L +L+++Y+ S A + ++P RD V+W LI +
Sbjct: 134 IHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGF 193
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
D++ LF + E G P++ T L+AC+ AL+ G+++H + G + +
Sbjct: 194 ANDSIYLFQEMQNE--GIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
++L+ +Y+KCG + +A ++F GMPE++ V+W+ +++G A G ++ F +M V
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC-VVDLLGRAGLLDQAY 290
++ T T VL C++ + +G + + K G N GC +VD+ + GL A
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIK-CGYEGN-EFIGCGLVDMYSKCGLAIDAI 369
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--LLNLYSS 348
+ ++ KPD +W L+ C + + + HL+ L Y + LL+ ++
Sbjct: 370 GVFKTIK-KPDIVVWSALI-TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCS----TIGLK-GVVHE 384
G+ + + + + + G +T S T+ +K G VH+
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 121/229 (52%), Gaps = 2/229 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF M + + N F + +K C +L G IH+ +++ GY+ + + L+D+YS
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ +A +F I + D V W+ LI+C + ++ +++ LF + ++ P+ T
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT--LPNQYTI 418
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+L A + G L++G+ IH + ++G+ + + + N+L+ MY K G + ++++ M +
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+D++SW+A +SGL G + F M G P+ TF +L +CS
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ ++ E+ F +M+Q+ + N F + + C SL GG Q+H+ V + G
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ EA LF+ + +RDT+AWN +I Y +N + AL F
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G PD VT +L AC+H G +E G E + + G ++ C ++ +
Sbjct: 708 MMLDE--GISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G F+ + +K +S +A+I
Sbjct: 766 RVGK----FDELEDFIQKMQLSQNALI 788
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ CA +L + IH I + +L SL+ +Y+KC A V MP++D
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW+A+I GL G D+I F MQ G+ P++ T L ACS C +D G
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ K G+L ++ +VDL + G ++ A ++ M + D T W LL V
Sbjct: 238 QAFK-LGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT-WNVLLNGYAQRGDV 295
Query: 319 TLGERVIEHLIELKAQ 334
T ++ ++EL +
Sbjct: 296 TGVLKLFCSMMELDVK 311
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 295/504 (58%), Gaps = 3/504 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P+E L M + R N F + +K S G QIHA ++
Sbjct: 136 LIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD 195
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ + A +FD++ ++ V+WN LI+ + R L +F
Sbjct: 196 WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 255
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T V A A +GALE G+ +H ++ + G + N+++ MY+K
Sbjct: 256 EMQR--NGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAK 313
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + +KDVV+W++M++ A G GR+A+ F M++ GV + TF +
Sbjct: 314 SGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSI 373
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M K++ + P I HY VVDLLGRAGLL+ A I M +KP
Sbjct: 374 LTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 432
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLG+CR+HK+ +G+ +H+ EL ++G VLL N+Y+S G W+ +R+
Sbjct: 433 TAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRK 492
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV +D +HPR EIY+ +EI+ Q++ AGYV
Sbjct: 493 MMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDY 552
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G TIR+ KN+RIC DCH+ + +S V+
Sbjct: 553 VLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFK 612
Query: 481 REVIIRDRLRFHHFREGRCSCNDY 504
RE+++RD RFHHF G CSC DY
Sbjct: 613 REIVVRDTNRFHHFSSGSCSCGDY 636
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 7/296 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
I C ++ SL IHA + + L +L+ LY +A ++FD +P RD
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+W LI+ Y +N +AL L + R KP+ T +L+A + GE+IH
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGR--FKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
++ + + + ++L+ MY++CG + MA VF + K+ VSW+A+I+G A G G
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ F MQR G T++ V SA + G +++G M K G + +
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKS-GERLSAFVGNTI 307
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+D+ ++G + A ++ + K D W ++L A LG + H E++
Sbjct: 308 LDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTA---FAQYGLGREAVTHFEEMR 359
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
RD L D+++ E P L+ ACA +L+ IH +++ + + L N
Sbjct: 49 RDTL---DSVDARELAATPRLYHSLIT--ACARYRSLDDARAIHAHLAGSQFAGSVFLDN 103
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
SLI +Y KCG++ A VF GMP +D+ SW+++I+G A N +A+ M R P
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF +L A G + ++ + +++ ++D+ R G +D A +
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQ-IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
Query: 293 ITSMGVKPDSTIWRTLLG 310
+ K + W L+
Sbjct: 223 FDQLESK-NGVSWNALIA 239
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 285/505 (56%), Gaps = 8/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ +S + ++F +M++ + + + C L G +H ++ G
Sbjct: 124 LISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGG 183
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + + +Y +LFDE+P + + WN +IS Y +N D L LF+
Sbjct: 184 TYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFE 243
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG PD T + VL +CAHLGA + G+++ + +G+ + L N+LI+MY++
Sbjct: 244 QM--KSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYAR 301
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A VF MP K +VSW+AMI M+G G + F M + G+ PD F V
Sbjct: 302 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMV 361
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL D+G+ M +++ + P HY C+VDLLGRAG LD+A + I SM V+P
Sbjct: 362 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEP 421
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IHK+V + E +IE + G YVL+ N+YS + E + +R
Sbjct: 422 DGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRV 481
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ + PG S + KG VH F+ D SH + E+++MLDE+ V E+
Sbjct: 482 MMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETS------VMELAG 535
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ EE + HSE+LAIAFG+L + PGT I V KNLR+C DCH F K++S + +
Sbjct: 536 NMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVD 595
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R ++RD RFH+F++G CSC DYW
Sbjct: 596 RRFVVRDASRFHYFKDGVCSCKDYW 620
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 177/374 (47%), Gaps = 8/374 (2%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R + S E L+ M + + F+ F +K C + G Q+H V+R G
Sbjct: 22 LRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGC 81
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT--VAWNVLISCYIRNQRTRDALCLF 119
+ + ++T L+ +Y +A K+F+E P V +N LIS Y N + DA +F
Sbjct: 82 EAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMF 141
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +E+G D VT L ++ C L G +H + G S++ + NS I MY
Sbjct: 142 RRM--KETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYM 199
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGS+ +F MP K +++W+A+ISG + NG D +E F M+ +GV PD T
Sbjct: 200 KCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVS 259
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLS+C+H G G + + + G PN+ ++ + R G L +A + M VK
Sbjct: 260 VLSSCAHLGAKKIGQEVGELVEAN-GFAPNVFLSNALISMYARCGNLAKARAVFDIMPVK 318
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD-YVLLLNLYSSVGDWEKVKEL 358
+ W ++G +H G + + +I+ + G +V++L+ S G +K EL
Sbjct: 319 SLVS-WTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 377
Query: 359 -REFMNEKGLQTTP 371
R E L+ P
Sbjct: 378 FRAMKREYKLEPGP 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 50/314 (15%)
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
+ +WNV + +++ L+ ++ R SG PD + +L++CA L G+++
Sbjct: 15 STSWNVRLRELAYQSLFTESISLYRSMLR--SGSSPDAFSFPFILKSCASLSLPVSGQQL 72
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV--VSWSAMISGLAMNG 213
H ++ G ++ + +LI+MY KCG + A +VF+ P V ++A+ISG N
Sbjct: 73 HCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANS 132
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACS---------------------------- 245
DA F M+ GV D T G++ C+
Sbjct: 133 KVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLN 192
Query: 246 -------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM-- 296
CG V+ G D M + + + V+ + GL +L M
Sbjct: 193 SFITMYMKCGSVESGRRLFDEMP-----VKGLITWNAVISGYSQNGLAYDVLELFEQMKS 247
Query: 297 -GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGDWE 353
GV PD ++L +C +G+ V E L+E ++ L+++Y+ G+
Sbjct: 248 SGVCPDPFTLVSVLSSCAHLGAKKIGQEVGE-LVEANGFAPNVFLSNALISMYARCGNLA 306
Query: 354 KVKELREFMNEKGL 367
K + + + M K L
Sbjct: 307 KARAVFDIMPVKSL 320
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/510 (38%), Positives = 302/510 (59%), Gaps = 10/510 (1%)
Query: 1 MVRAYSMSSSPEE--GFY---LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
++ AY + P GF+ LF MR + A F + + G + R
Sbjct: 320 IIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCR 379
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
L ++D + L+++Y+ A +F+++P RD ++WN LI+ Y +N +A
Sbjct: 380 WL----EVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEA 435
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ + N+ E P+ T + +L A +H+GAL+ G KIH + ++ + + LI
Sbjct: 436 IDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLI 494
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY KCG L A +F +P++ V W+A+IS L ++GHG A++ F M+ GV D
Sbjct: 495 DMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHI 554
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF +LSACSH GLVDE D M K++ I PN+ HYGC+VDL GRAG L++AY L+++
Sbjct: 555 TFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSN 614
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M ++ D++IW TLL ACRIH + LG + L+E+ ++ G YVLL N+Y++VG WE
Sbjct: 615 MPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGA 674
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
++R ++GL+ TPG S++ + VV F + SHP+ EIY+ L +N ++K GYV
Sbjct: 675 VKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYV 734
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + L ++ +EK L+ HSE+LAI FG+++TPP + IR+ KNLR+C DCHN K +
Sbjct: 735 PDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYI 794
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + RE+I+RD RFHHF++G CSC DYW
Sbjct: 795 SKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 179/351 (50%), Gaps = 10/351 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + + E + ++M+ + + + S + C + ++GG+ +H V++ G
Sbjct: 219 MISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHG 278
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++YS F + +A ++FD + RD V+WN +I+ Y +N AL F
Sbjct: 279 LESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFK 338
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ G +PD +T + + L G +H ++ + + N+L+ MY+
Sbjct: 339 EM--LFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYA 396
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFT 238
K GS+ A VF+ +P +DV+SW+ +I+G A NG +AI+++ M+ + P+ T+
Sbjct: 397 KLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWV 456
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L A SH G + +GM R+ K+ L ++ C++D+ G+ G L+ A L +
Sbjct: 457 SILPAYSHVGALQQGMKIHGRLIKNCLFL-DVFVATCLIDMYGKCGRLEDAMSLFYEIP- 514
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDYVLLLNLYSS 348
+ S W ++ + IH H GE+ ++ +++A D++ ++L S+
Sbjct: 515 QETSVPWNAIISSLGIHGH---GEKALQLFKDMRADGVKADHITFVSLLSA 562
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 139/262 (53%), Gaps = 8/262 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA +L G D L+T L+ LY+T + F I +++ +WN ++S Y+R
Sbjct: 69 QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRG 128
Query: 111 RTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
R RD++ C+ + L+ SG +PD T VL+AC L GEK+H ++ + G+ +
Sbjct: 129 RYRDSMDCVTELLSL--SGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVY 183
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ SLI +YS+ G++ +A +VF MP +DV SW+AMISG NG+ +A+ M+
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V D T + +L C+ V G++ + K G+ ++ ++++ + G L A
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKH-GLESDVFVSNALINMYSKFGRLQDA 302
Query: 290 YQLITSMGVKPDSTIWRTLLGA 311
++ M V+ D W +++ A
Sbjct: 303 QRVFDGMEVR-DLVSWNSIIAA 323
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 5/206 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C+ SL G ++H VL+ G++ D + +L+ LYS F A K+F ++P RD
Sbjct: 157 LKACL---SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDV 213
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
+WN +IS + +N +AL + D + EE K D VT +L CA + G +H
Sbjct: 214 GSWNAMISGFCQNGNVAEALRVLDRMKTEE--VKMDTVTVSSMLPICAQSNDVVGGVLVH 271
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
Y+ +HG S + + N+LI MYSK G L A VF GM +D+VSW+++I+ N
Sbjct: 272 LYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPV 331
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLS 242
A+ F M G+ PD T + S
Sbjct: 332 TALGFFKEMLFVGMRPDLLTVVSLAS 357
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
LV ++C ++ +++H + G + L L+ +Y+ G L ++ FK + K
Sbjct: 56 LVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRK 112
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGA-MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
++ SW++M+S G RD+++ + +GV PD TF VL AC ++ +
Sbjct: 113 NIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCW 172
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ +M G +++ ++ L R G ++ A+++ M V+ D W ++ +
Sbjct: 173 VLKM----GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQNG 227
Query: 317 HVTLGERVIEHL 328
+V RV++ +
Sbjct: 228 NVAEALRVLDRM 239
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 301/538 (55%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR-VLRD 59
++RAY++ + + MR++R+ F S C G Q+HA+ +L
Sbjct: 80 LIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLG 139
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ D + ++D+Y A +FDE+P+RD ++W LI Y R R A LF
Sbjct: 140 GFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLF 199
Query: 120 DNL-----------------------------NREESGCKPDDVTCLLVLQACAHLGALE 150
D L + G + D+VT + V+ ACA LGA +
Sbjct: 200 DGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASK 259
Query: 151 FGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+ I G+G N+ ++LI MYSKCG++ A++VFKGM E++V S+S+MI G
Sbjct: 260 YANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVG 319
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
A++G R AI+ F M GV P+ TF GVL+ACSH GLVD+G M K +G+ P
Sbjct: 320 FAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAP 379
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
Y C+ DLL RAG L++A QL+ +M ++ D +W LLGA +H + + E + L
Sbjct: 380 TAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRL 439
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLK-GVVHEFVV 387
EL+ G+Y+LL N Y+S G W+ V ++R+ + EK L+ PG S + K G++H+FV
Sbjct: 440 FELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVA 499
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
DVSHP+INEI + L+++ ++LK GY ++S + + EK L HSEKLA+AFG+
Sbjct: 500 GDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGL 559
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L+T G+TI++ KNLRIC DCH S V R++++RD RFHHF G CSC+++W
Sbjct: 560 LSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTRFHHFLNGACSCSNFW 617
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 279/461 (60%), Gaps = 5/461 (1%)
Query: 48 GGLQIHARVLRDG--YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
GG++I R++ LD T L++ Y A ++F+ + D VAW +I
Sbjct: 289 GGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVG 348
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y++N DA+ +F + E G +P+ T +L A + + +L G++IH G
Sbjct: 349 YVQNGLNNDAIEVFKTMVSE--GPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEA 406
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGA 224
++ N+L MY+K GS+ A +VF + + +D VSW++MI LA +G G +AIE F
Sbjct: 407 LSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQ 466
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M G+ PD T+ GVLSAC+H GLV++G + D M I P + HY C+VDL GRAG
Sbjct: 467 MLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAG 526
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
LL +AY+ + +M ++PD W +LL +C+++K+V L + E L+ ++ SG Y L N
Sbjct: 527 LLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALAN 586
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+YSS G W+ ++R+ M +G++ G S + ++ H F V+D HP+ +EIY+M+D+
Sbjct: 587 VYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDK 646
Query: 405 INKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
I K++K G+ + S LH+L E K L YHSEKLAIAFG+++TP TT+R+ KNLR+
Sbjct: 647 IWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRV 706
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCHN K +S + +RE+I+RD RFHHF++G CSC DYW
Sbjct: 707 CNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 162/390 (41%), Gaps = 69/390 (17%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E+ +F M + ++ F + + C S G ++H+ V++ G
Sbjct: 78 IIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLG 137
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+++Y+ A +FD + R+T +WN +IS ++ R AL F+
Sbjct: 138 LHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFE 197
Query: 121 NLNREE--------SGC----------------------KPDDVTCLLVLQACAHLGALE 150
L+ + +GC KPD + L ACA+L L
Sbjct: 198 LLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLS 257
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM------------------------ 186
FG++IH YI + + + N+LI+MY+K G + +
Sbjct: 258 FGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNG 317
Query: 187 ---------AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
A ++F + + DVV+W+AMI G NG DAIE F M G P+ T
Sbjct: 318 YVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTL 377
Query: 238 TGVLSACSHCGLVDEG-MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+LSA S ++ G + + + P++ + + + +AG ++ A ++ +
Sbjct: 378 AAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLL 435
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
D+ W +++ A H LGE IE
Sbjct: 436 RQNRDTVSWTSMIMALAQH---GLGEEAIE 462
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 20/225 (8%)
Query: 58 RDGYQLDSQLMTTLMDLYSTFE------------KSFEACKLFDEIPQRDTVAWNVLISC 105
+ G+ LD+ + M + +TF K +A ++FD IP RD+V+W +I
Sbjct: 22 KTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVG 81
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y + R DA+ +F ++ +++ P T VL +CA G+ G+K+H ++ + G
Sbjct: 82 YNQMGRFEDAIKIFVDMVKDK--VLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLH 139
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN-GHGRDAIESFGA 224
+ + + NSL+ MY+K G L MA VF M ++ SW+AMIS L MN G A+ F
Sbjct: 140 ACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS-LHMNCGRVDLALAQFEL 198
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+ + ++ +++ C+ G +E + F + KD + P+
Sbjct: 199 LSERDIV----SWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 22/320 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F+ M + N F + + SL G QIHA +R G
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
L + L +Y+ A K+F+ + Q RDTV+W +I ++ +A+ LF
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELF 464
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMY 178
+ + G KPD +T + VL AC H G +E G + H ++ ++ ++
Sbjct: 465 EQM--LTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLF 522
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-T 236
+ G L A++ + MP E DV++W +++S + + + A + + P++
Sbjct: 523 GRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV--YKNVDLAKVAAERLLLIEPNNSGA 580
Query: 237 FTGVLSACSHCGLVDEG-----MMFLDRMSKDFGI----LPNIHHYGCVVDLLGRA---- 283
++ + + S CG D+ +M + K+ G+ + N H V D L
Sbjct: 581 YSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEI 640
Query: 284 -GLLDQAYQLITSMGVKPDS 302
++D+ ++ I MG PD+
Sbjct: 641 YKMMDKIWKEIKKMGFAPDT 660
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 296/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P E L M + R N F + +K + G QIHA ++
Sbjct: 123 LIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCD 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ K A +FD++ ++ V+WN LIS + R AL +F
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFA 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T + A +GALE G+ +H ++ + + N+++ MY+K
Sbjct: 243 EMQR--NGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAK 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF+ + KD+V+W++M++ A G G++A+ F M+++G++ + TF +
Sbjct: 301 SGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCI 360
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M K++ + P I HY VVDLLGRAGLL+ A I M ++P
Sbjct: 361 LTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LL ACR+HK+ +G+ +H+ +L +SG VLL N+Y+S G W+ +R+
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRK 479
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + + VH FV +D +HPR EIY+M DEI+ +++ GYV ++
Sbjct: 480 MMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDY 539
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G TIR+ KN+RIC DCH+ K +S V+
Sbjct: 540 VLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFE 599
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 600 REIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 10/314 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT +F I C + +L +IH + ++ D+ L +L+ LY EA K
Sbjct: 49 PTPRVYHAF-ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHK 107
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD++ ++D V+W LI+ Y +N +A+ L + + KP+ T +L+A
Sbjct: 108 VFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR--FKPNGFTFASLLKAAGAY 165
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G +IH + + + + ++L+ MY++CG + MA VF + K+ VSW+A+I
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A G G A+ F MQR G T++ + S + G +++G M K
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
L ++D+ ++G + A ++ + + D W ++L A LG+ +
Sbjct: 286 LTAFVG-NTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAF---AQYGLGKEAVS 340
Query: 327 HLIELKAQESGDYV 340
H E++ +SG Y+
Sbjct: 341 HFEEMR--KSGIYL 352
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 292/528 (55%), Gaps = 33/528 (6%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P +G +F +M + NP S + C + L G +IH +R G ++ + +
Sbjct: 160 PRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSA 219
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR------ 124
L+ LY+ EA +FD +P RD V+WN +++ Y +N+ LF ++R
Sbjct: 220 LVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRAD 279
Query: 125 ---------------------------EESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
++ G KP+++T +L AC+ L G++IH
Sbjct: 280 EATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHC 339
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
Y+ H + +L+ MY+KCG L ++ VF M KDVV+W+ MI AM+G+G++
Sbjct: 340 YVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKE 399
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+ F M + V P+ TFTGVLS CSH LV+EG+ + M +D + P+ +HY CVV
Sbjct: 400 ALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV 459
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
D+ RAG L++AY+ I M ++P ++ W LL ACR++K+V L + + L E++ G
Sbjct: 460 DIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPG 519
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
+YV L N+ + W + ++R M E+G+ TPGCS + + VH FVV D S+ ++
Sbjct: 520 NYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDK 579
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIR 457
IY LDE+ +++K+AGY + L ++ EEK +L HSEKLA+AFG+L +TIR
Sbjct: 580 IYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIR 639
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V KNLRIC DCHN K +S V +++RD LRFHHF+ G CSC D W
Sbjct: 640 VFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 40/368 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A + E ++ ++++ I + A K C + ++H R G
Sbjct: 49 LISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG 108
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+ Y + A ++FD++ RD V+W L SCY++ R + +F
Sbjct: 109 VMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFR 168
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ SG KP+ +T +L ACA L L+ G++IH + HG + +C++L+++Y+K
Sbjct: 169 EMGW--SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAK 226
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C S+ A VF MP +DVVSW+ +++ N F M R GV D+ T+ V
Sbjct: 227 CLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAV 286
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ C G +E + +M K MG KP
Sbjct: 287 IGGCMENGRSEEAVEMFRKMQK---------------------------------MGFKP 313
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY---VLLLNLYSSVGDWEKVKE 357
+ ++L AC +++ +G+ + H + + GD LL +Y+ GD +
Sbjct: 314 NEITISSILPACSFSENLRMGKEI--HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRN 371
Query: 358 LREFMNEK 365
+ + M K
Sbjct: 372 VFDMMRRK 379
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD IPQ D + LIS + + +A+ ++ +L +E G KPD L +AC
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSL--QERGIKPDMPVFLAAAKAC 88
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A G +++H + G S + + N+LI Y KC + A VF + +DVVSW+
Sbjct: 89 AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWT 148
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HCGLVDE 252
++ S G R ++ F M +GV P+ T + +L AC+ H V
Sbjct: 149 SLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRH 208
Query: 253 GM---MFL----------------DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
GM +F+ RM D ++ + V+ + ++ + L
Sbjct: 209 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 268
Query: 294 TSM---GVKPDSTIWRTLLGAC 312
M GV+ D W ++G C
Sbjct: 269 LKMSRDGVRADEATWNAVIGGC 290
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A +M + +E +LF+KM R+ N + + C + G+QI + RD
Sbjct: 387 MIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDH 446
Query: 61 -YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV-AWNVLIS 104
+ D+ + ++D+YS + EA K +P T AW L++
Sbjct: 447 LVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 492
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 289/493 (58%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +MR++ N + +K ++ Q+HA + G+ DS ++ L+
Sbjct: 389 ESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLI 448
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D Y A K+F+E + +A+ +I+ + DA+ LF + R+ G +PD
Sbjct: 449 DSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRK--GLEPD 506
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+L ACA L A E G+++H ++ + + + + N+L+ Y+KCGS+ A F
Sbjct: 507 PFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFS 566
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
G+P+K VVSWSAMI GLA +GHG+ A++ F M + P+ T T VL AC+H GLVDE
Sbjct: 567 GLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDE 626
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ M + FGI HY C++DLLGRAG LD A +L+ SM + ++ +W LL A
Sbjct: 627 AKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAAS 686
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R+H+ LG+ E L L+ ++SG +VLL N Y+S G W++V ++R+ M + ++ P
Sbjct: 687 RVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPA 746
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S + LK VH F+V D SHPR +IY L+E+ + AGYV + +LH++ EK
Sbjct: 747 MSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKEL 806
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
LS+HSE+LA+AF +++TP G IRV KNLRIC DCH K +S + +RE+IIRD RFH
Sbjct: 807 LLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFH 866
Query: 493 HFREGRCSCNDYW 505
HF +G CSC DYW
Sbjct: 867 HFSDGACSCGDYW 879
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 16/318 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V AYS ++ P E F MR + + N FA +KC G+Q+HA + G
Sbjct: 74 LVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTG 130
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
D + L+ +Y F EA ++FDE + R+ V+WN ++S +++N R DA+ LF
Sbjct: 131 LSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELF 190
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ SG +P++ V+ AC LE G K+H + GY + N+L+ MYS
Sbjct: 191 GEM--VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYS 248
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + MA VF +P+ DVVSW+A ISG ++GH + A+E M+ +G+ P+ T +
Sbjct: 249 KLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308
Query: 240 VLSACSHCGLVDEGMM-----FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+L AC+ G + F+ + D + +VD+ + GLLD A ++
Sbjct: 309 ILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGV----ALVDMYAKYGLLDDARKVFE 364
Query: 295 SMGVKPDSTIWRTLLGAC 312
+ K D +W L+ C
Sbjct: 365 WIPRK-DLLLWNALISGC 381
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL G IHA +L+ G L L+ YS A ++FDE P V+W+ L++
Sbjct: 19 SLFLGAHIHAHLLKSG--LLHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVT 76
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y N R+AL F + G + ++ +VL+ G G ++H G
Sbjct: 77 AYSNNALPREALAAFRAMRAR--GVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGL 131
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ + N+L+AMY G + A VF + +++ VSW+ M+S N DA+E FG
Sbjct: 132 SGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFG 191
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M +GV P++ F+ V++AC+ ++ G + M G ++ +VD+ +
Sbjct: 192 EMVWSGVRPNEFGFSCVVNACTGSRDLEAGRK-VHAMVVRTGYDKDVFTANALVDMYSKL 250
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
G + A L+ K D W + C +H H + +E L+++K+
Sbjct: 251 GDIHMA-ALVFGKVPKTDVVSWNAFISGCVLHGH---DQHALELLLQMKSS 297
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 177/377 (46%), Gaps = 21/377 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A+ + + LF +M + N F S + C L G ++HA V+R G
Sbjct: 173 MMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTG 232
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D L+D+YS A +F ++P+ D V+WN IS + + + AL L
Sbjct: 233 YDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELL- 291
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG--EKIHRYISEHGYGSKMNLCNSLIAMY 178
L + SG P+ T +L+ACA GA F +IH ++ + S + +L+ MY
Sbjct: 292 -LQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMY 350
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K G L A +VF+ +P KD++ W+A+ISG + G +++ F M++ G + T
Sbjct: 351 AKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLA 410
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL + + + + + +++ G L + H ++D + L A ++
Sbjct: 411 AVLKSTASLEAISDTTQ-VHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH-- 467
Query: 299 KPDSTI-WRTLLGACRIHKHVTLGERVIEHLIEL--KAQESGDYVL--LLNLYSSVGDWE 353
D+ I + +++ A H GE I+ +E+ K E +VL LLN +S+ +E
Sbjct: 468 SSDNIIAFTSMITALSQCDH---GEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 524
Query: 354 KVKEL------REFMNE 364
+ K++ R+FM +
Sbjct: 525 QGKQVHAHLIKRKFMTD 541
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 9/256 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A S E+ LF +M +K + +PF S + C + G Q+HA +++
Sbjct: 478 MITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRK 537
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L+ Y+ +A F +P + V+W+ +I ++ + AL +F
Sbjct: 538 FMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFR 597
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E P+ +T VL AC H G ++ + + E G + +I +
Sbjct: 598 RMVDER--IAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLG 655
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A E+ MP E + W A+++ ++ RD A ++ V +++ T
Sbjct: 656 RAGKLDDAMELVNSMPFEANAAVWGALLAASRVH---RDPELGKLAAEKLFVLEPEKSGT 712
Query: 239 GVLSACSH--CGLVDE 252
VL A ++ G+ DE
Sbjct: 713 HVLLANTYASAGMWDE 728
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P+ ++ LL A +L G IH ++ + G N L++ YSKC G A V
Sbjct: 4 PESISPLLTRYAATQ--SLFLGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRV 59
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F P+ VSWS++++ + N R+A+ +F AM+ GV ++ VL GL
Sbjct: 60 FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLG 119
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ + ++ G+ +I +V + G G +D+A ++ ++ W ++
Sbjct: 120 VQ----VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175
Query: 311 A 311
A
Sbjct: 176 A 176
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/507 (39%), Positives = 298/507 (58%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + E +F +M + N F + + C++ L G QIH +++
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + ++L+D+Y+ + EA ++F+ +P+RD V+ +I+ Y + +AL +F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L+ E G P+ VT +L A + L L+ G++ H ++ L NSLI MYSK
Sbjct: 244 RLHSE--GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTG 239
CG+L A +F MPE+ +SW+AM+ G + +G GR+ +E F M+ V PD T
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 240 VLSACSHCGLVDEGMMFLDRM-SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLS CSH + D G+ D M + ++G P HYGC+VD+LGRAG +D+A++ I M
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 421
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KP + + +LLGACR+H V +GE V LIE++ + +G+YV+L NLY+S G W V +
Sbjct: 422 KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNV 481
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M +K + PG S I + +H F +D +HPR E+ + EI+ ++K AGYV ++
Sbjct: 482 RAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L+++ E+K L HSEKLA+ FG++AT G IRV KNLRICVDCHNFAK+ S V
Sbjct: 542 SCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKV 601
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+ REV +RD+ RFH +G CSC DYW
Sbjct: 602 FEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 170/345 (49%), Gaps = 36/345 (10%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
PE GF+ ++ + + C+ +L G ++HA +++ Y + L T
Sbjct: 48 PEMGFHGYDAL---------------LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTR 92
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ Y + +A K+ DE+P+++ V+W +IS Y + + +AL +F + R + K
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG--K 150
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P++ T VL +C L G++IH I + Y S + + +SL+ MY+K G + A E+
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F+ +PE+DVVS +A+I+G A G +A+E F + G+ P+ T+ +L+A S L+
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270
Query: 251 DEGMM----FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI-- 304
D G L R + +L N ++D+ + G L A +L +M P+ T
Sbjct: 271 DHGKQAHCHVLRRELPFYAVLQN-----SLIDMYSKCGNLSYARRLFDNM---PERTAIS 322
Query: 305 WRTLLGACRIHKHVTLGERVIE--HLIELKAQESGDYVLLLNLYS 347
W +L H LG V+E L+ + + D V LL + S
Sbjct: 323 WNAMLVGYSKH---GLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L AC AL G+++H ++ + Y L L+ Y KC L A +V MPEK+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC---SHCGLVDE--- 252
VVSW+AMIS + GH +A+ F M R+ P++ TF VL++C S GL +
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 253 -------------GMMFLDRMSKD---------FGILPNIHHYGCVVDLLGRA--GLLDQ 288
G LD +K F LP C + G A GL ++
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 289 AYQL---ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN- 344
A ++ + S G+ P+ + +LL A + G++ H++ +E Y +L N
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR---RELPFYAVLQNS 294
Query: 345 ---LYSSVGDWEKVKELREFMNEK 365
+YS G+ + L + M E+
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPER 318
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 296/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + E + ++MR + + + + + C + ++ G IH V++ G
Sbjct: 66 MISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHG 125
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+++Y+ F A K+F + +D V+WN LI+ Y +N +A+ ++
Sbjct: 126 LEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLASEAIEVY- 183
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E P+ T + +L A +H+GAL+ G +IH + ++ S + + LI MY K
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGK 243
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A +F +P K+ V W+AMIS ++G G A+E F M+ V PD TF +
Sbjct: 244 CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSL 303
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV + + M +++GI P++ HYGC+VDL GRAG L+ A+ I M ++P
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D++ W LL ACRIH ++ LG+ E L E+ ++ G YVLL N+Y++VG WE V ++R
Sbjct: 364 DASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRS 423
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
++GL+ PG S+I L V F + +HP+ EIY+ L ++ ++K GYV +
Sbjct: 424 LARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCF 483
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK + L HSE+LAIA+G+++T P T IR+ KNLR+C DCH K +S +
Sbjct: 484 VLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITE 543
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF+ G CSC DYW
Sbjct: 544 REIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 172/305 (56%), Gaps = 10/305 (3%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
L+ G +IH VL+ G++ D + +L+ +YS F +A KLFD++P RD +WN +IS
Sbjct: 10 LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISG 69
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y +N +AL + D + E G K D +T VL CA +G + G+ IH Y+ +HG
Sbjct: 70 YCQNGNAAEALDIADEMRLE--GVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLE 127
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
++ + N+LI MY+K GSLG A +VF G+ KDVVSW+ +I+G A NG +AIE + M
Sbjct: 128 FELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLM 186
Query: 226 QR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
+ + P+ T+ +L A SH G + +GM ++ K+ + ++ C++D+ G+ G
Sbjct: 187 EEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNC-LYSDVFVGTCLIDMYGKCG 245
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLL 343
LD A L + K +S W ++ +H GE+ +E E+KA+ D++ +
Sbjct: 246 KLDDAISLFYQVPRK-NSVPWNAMISCYGVHGD---GEKALELFREMKAERVKPDHITFV 301
Query: 344 NLYSS 348
+L S+
Sbjct: 302 SLLSA 306
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
V++AC G L G+KIH + + G+ + + SL+ MYS+ G +G A ++F MP +D
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
SW+AMISG NG+ +A++ M+ GV D T VL C+ G + G +
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ K G+ + ++++ + G L A Q + + +K D W TL+ +
Sbjct: 120 YVIK-HGLEFELFVSNALINMYAKFGSLGHA-QKVFGLLIK-DVVSWNTLITG---YAQN 173
Query: 319 TLGERVIEHLIELKAQE-----SGDYVLLLNLYSSVG 350
L IE + ++ E G +V +L YS VG
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVG 210
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 282/494 (57%), Gaps = 39/494 (7%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF+KM + + + + + CC+ + G +H V++ G++ + L
Sbjct: 398 EEAILLFKKMHARNMKIDHYTFPSVLNCCI--VGRIDGKSVHCLVIKTGFENYKLVSNAL 455
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ E A +F+++ ++D ++W L++ Y +N ++L F ++ SG P
Sbjct: 456 VDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRI--SGVSP 513
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D +L ACA L LEFG+++H + G S +++ NSL+ MY+KCG L A +F
Sbjct: 514 DQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIF 573
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M +DV++W+A+I G A NG GRD+++ F
Sbjct: 574 VSMHVRDVITWTALIVGYARNGKGRDSLKYF----------------------------- 604
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+M K +GI P HY C++DL GR G LD+A +++ M VKPD+T+W+ LL A
Sbjct: 605 ------QQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAA 658
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H ++ LGER +L EL+ + YV+L N+Y + W+ ++R M KG+ P
Sbjct: 659 CRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEP 718
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS I + +H F+ +D HPR EIY +DEI +++K GYV ++ LH++ E K
Sbjct: 719 GCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKE 778
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
L+YHSEKLA+AFG+LA+PPG IR+ KNLR+C DCH+ K +SGV+ R +I+RD F
Sbjct: 779 AGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCF 838
Query: 492 HHFREGRCSCNDYW 505
HHF+EG CSC DYW
Sbjct: 839 HHFKEGECSCEDYW 852
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 26/320 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y E F LF++MR + + + ++ C + G IH V+++G
Sbjct: 183 LISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNG 242
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
++ + ++ L+D+Y+ EA LF + + + V W +++ Y +N A+
Sbjct: 243 FESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEF 302
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F ++ E G + + T +L AC+ + A FGE++H I +G+G + ++L+ MY
Sbjct: 303 FRYMHTE--GVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMY 360
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG LG A V + M + DVVSW++MI G +G +AI F M + D TF
Sbjct: 361 AKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFP 420
Query: 239 GVLSAC---------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
VL+ C HC ++ G +++ ++ N +VD+ + L+ A
Sbjct: 421 SVLNCCIVGRIDGKSVHCLVIKTGF-------ENYKLVSN-----ALVDMYAKTEDLNCA 468
Query: 290 YQLITSMGVKPDSTIWRTLL 309
Y + M + D W +L+
Sbjct: 469 YAVFEKM-FEKDVISWTSLV 487
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 134/270 (49%), Gaps = 17/270 (6%)
Query: 54 ARVLRDG-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
AR L D Q D T++ Y+ + EA +LF+ R ++ W+ LIS Y R R
Sbjct: 134 ARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQ 193
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+A LF + E G KP T +L+ C+ LG ++ GE IH Y+ ++G+ S + +
Sbjct: 194 AEAFDLFKRMRLE--GQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVA 251
Query: 173 SLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
L+ MY+KC + A +FKG+ + + V W+AM++G A NG AIE F M GV
Sbjct: 252 GLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGV 311
Query: 231 FPDDQTFTGVLSACS----HC-GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+ TF +L+ACS HC G G + + FG N + +VD+ + G
Sbjct: 312 ESNQFTFPSILTACSSVSAHCFGEQVHGCI----VRNGFGC--NAYVQSALVDMYAKCGD 365
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
L A +++ +M D W +++ C H
Sbjct: 366 LGSAKRVLENME-DDDVVSWNSMIVGCVRH 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 31/185 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ + S EE F MR + + F + + C + L G Q+H+ ++ G
Sbjct: 486 LVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLG 545
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+ +Y+ +A +F + RD + W LI Y RN + RD+L F
Sbjct: 546 LRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQ 605
Query: 121 NLNR--------EESGC-----------------------KPDDVTCLLVLQACAHLGAL 149
+ + E C KPD +L AC G L
Sbjct: 606 QMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNL 665
Query: 150 EFGEK 154
E GE+
Sbjct: 666 ELGER 670
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH----------------- 214
N L+ SK G + A E+F M ++D +W+ M+SG A G
Sbjct: 119 NQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSI 178
Query: 215 ------------GR--DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
GR +A + F M+ G P T +L CS GL+ +G M +
Sbjct: 179 TWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYV 238
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV-KPDSTIWRTLL 309
K+ G N++ +VD+ + + +A L + K + +W ++
Sbjct: 239 VKN-GFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMV 287
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/456 (39%), Positives = 266/456 (58%), Gaps = 4/456 (0%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H+ +LR G + L+D Y+ + A +FDE+P+RD V+W L++ R++
Sbjct: 61 LHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRS 120
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
AL ++ ++ +G PD+ L +CA ALE G +H +++
Sbjct: 121 HDSALQVYRDM--VAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVG 178
Query: 172 NSLIAMYSKCGSLGMAFEVFKG--MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
NSL++MY+K GSLG A +VF + D ++W+A+I G A NG GR+++E + M R+G
Sbjct: 179 NSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSG 238
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD TF G+L ACSH GLVD G M + GI P HY C+VDLLGRAG LD+A
Sbjct: 239 CRPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEA 298
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
L+ + D+T+W+ LL ACR H++ L E + L ++ YV+L NLYS
Sbjct: 299 MDLLNRSTTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRA 358
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G W V +R M +G+ PGCS + GV H F V+D HPR E+Y+ ++E+ +++
Sbjct: 359 GRWGDVARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERI 418
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
+ GYVA+ L + G E + L++HSE+LA+AFG+LA P G IRV KNLR+C DCH
Sbjct: 419 RGQGYVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCH 478
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K+++ Y RE+++RD FHH ++G CSC DYW
Sbjct: 479 AAIKMVAQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
VA+N IS R + AL L + G + D+ T L + A L + +H
Sbjct: 7 VAYNAAISRCSRAGLHQRALALLHEM--RARGHRADEYTLPPALNSAALLRLP--ADALH 62
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G + +++ N+L+ Y+K G A VF MP +DVVSW+++++GLA +
Sbjct: 63 SLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHD 122
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
A++ + M AGV PD+ LS+C+ ++ G + + + P + +
Sbjct: 123 SALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRS-VHAAAVRLALDPFLSVGNSL 181
Query: 277 VDLLGRAGLLDQAYQLITSMGV-KPDSTIWRTLL 309
V + + G L +A ++ + V + D W L+
Sbjct: 182 VSMYAKTGSLGEAKKVFDATRVDRCDPITWTALI 215
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/497 (38%), Positives = 293/497 (58%), Gaps = 3/497 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +S ++ P + LF +M + N F S +K L G Q+HA L+ G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
YQ + + L+D+Y+ A FD +P + V+WN LIS + R AL L
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ +P T VL ACA +GALE G+ +H ++ + G + N+L+ MY+K
Sbjct: 280 KMQRK--NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAK 337
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A VF + + DVVSW+ M++G A +G G++ ++ F M R G+ P++ +F V
Sbjct: 338 AGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCV 397
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL+DEG+ + + M K + + P++ HY VDLLGR GLLD+A + I M ++P
Sbjct: 398 LTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEP 456
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGACR+HK++ LG E EL +SG +LL N+Y+S G W V ++R+
Sbjct: 457 TAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK 516
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E G++ P CS + ++ VH FV +D +HPRI EI +EI+ ++K GYV + +
Sbjct: 517 MMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSH 576
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + +E+ L YHSEKLA+AF +L TP G+ IR+ KN+R+C DCH K +S V +
Sbjct: 577 VLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVD 636
Query: 481 REVIIRDRLRFHHFREG 497
RE+I+RD RFH FR+G
Sbjct: 637 REIIVRDTNRFHRFRDG 653
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 160/304 (52%), Gaps = 7/304 (2%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM--TTL 71
G Y + +++ + + S +K C + + G +HA ++ D + LD+ L+ +
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLV-DSHFLDNHLVLQNII 129
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+++Y+ +A ++FDE+P +D V W LI+ + +N R RDAL LF + R G +P
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR--LGFQP 187
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ T +L+A L+ G ++H + ++GY S + + ++L+ MY++CG + A F
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF 247
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
GMP K VSW+A+ISG A G G A+ MQR P T++ VLSAC+ G ++
Sbjct: 248 DGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALE 307
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G M K G+ ++D+ +AG +D A ++ + VKPD W T+L
Sbjct: 308 QGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTG 365
Query: 312 CRIH 315
C H
Sbjct: 366 CAQH 369
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 10/243 (4%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
PD +L+ C LG +E G +H + + H + + L N ++ MY+KCG L A
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
+F MP KD+V+W+A+I+G + N RDA+ F M R G P+ T + +L A
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+D G L +G +++ +VD+ R G +D A M K + + W L+
Sbjct: 205 LDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALI 262
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGD----YVLLLNLYSSVGDWEKVKELREFMNEK 365
H GE + L +++ + Y +L+ +S+G E+ K + M +
Sbjct: 263 SG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS 319
Query: 366 GLQ 368
GL+
Sbjct: 320 GLK 322
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/521 (39%), Positives = 301/521 (57%), Gaps = 22/521 (4%)
Query: 1 MVRAYSMSSS---PEEGFYLFEKMRQKRIP-TNPFACSFAIKCCMKFCSLMGGLQIHARV 56
++RA + S S E L+ M Q+ P + F +K C +L G Q HA +
Sbjct: 93 LIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFALFEGKQAHAHL 152
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
L+ G+Q D + +L+ Y++ A +FD++PQR V+WN +I ++ AL
Sbjct: 153 LKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETAL 212
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMN---LCN 172
+ ++ +PD T V+ ACA L AL G H ++ + G + + N
Sbjct: 213 --QLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNN 270
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF- 231
SL+ MY KCGSL +A ++F+GM + DV SW++MI G AM+G G A+E F M R F
Sbjct: 271 SLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFV 330
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P+ TF GVLSAC+H +V+EG + D M ++ I P + HYGC+VD+L RAGL+D+A +
Sbjct: 331 PNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALE 390
Query: 292 LITSMGVKPDSTIWRTLLGAC-RIHKHVTLGERVIEHLIELK-AQESGDYVLLLNLYSSV 349
L+ SM +KPD IWR+LL +C + + V L E + ++E + A SG YVLL +Y+S
Sbjct: 391 LVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASA 450
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
W V +R+ M G+ PGCS I + GV HEF D SHP+ EIYQ+L+ + +++
Sbjct: 451 SRWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVVEERI 510
Query: 410 KIAGY-----VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
GY A + EL+ K ++L HSE+LAIA G+L PG IR+ KNLR+
Sbjct: 511 DSTGYKPDYSQAPMVDELNT----SKRDSLRLHSERLAIALGLLNLKPGMPIRIFKNLRV 566
Query: 465 CVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
C DCH ++S ++N E+I+RDR+RFHHF++G CSC DYW
Sbjct: 567 CDDCHKVTGLISEIFNVEIIVRDRVRFHHFKDGSCSCMDYW 607
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 13/298 (4%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C M L QIHA LR S L + ++ S + ++ A ++FD++ ++ W
Sbjct: 32 CKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSLHDLNY-AYRVFDQVDNPNSFMW 90
Query: 100 NVLISCYIRNQRT---RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
N+LI ++Q R+A+ L++ + + S PD+ T VL+ACA+L AL G++ H
Sbjct: 91 NILIRACAQSQSVHLKREAILLYNTM-LQRSSPFPDNHTFPFVLKACAYLFALFEGKQAH 149
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
++ + G+ S + + NSLI Y+ CGSL A VF MP++ +VSW+AMI + G
Sbjct: 150 AHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFE 209
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY--- 273
A++ F Q+ PD T V++AC+ + GM + ++ G+ H
Sbjct: 210 TALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVN 269
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
++D+ + G LD A Q+ M K D T W +++ +H L E +I +
Sbjct: 270 NSLLDMYCKCGSLDIATQIFEGMQ-KHDVTSWNSMILGFAMHGKGELALECFERMIRI 326
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 289/536 (53%), Gaps = 37/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-- 58
M+ Y S + F LF +M +++P + F + + C + G +H +++R
Sbjct: 269 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 328
Query: 59 DGYQLDSQLMT--TLMDLYSTFEKSFEACKLFDEIPQRDTVAWN---------------- 100
+ ++ L L+ LYS K A ++FD + +D V+WN
Sbjct: 329 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 388
Query: 101 ---------------VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
V++S Y+ + DAL LF+ + E+ KP D T + AC
Sbjct: 389 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAED--VKPCDYTYAGAIAACGE 446
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGAL+ G ++H ++ + G+ + + N+L+ MY+KCG++ A VF MP D VSW+AM
Sbjct: 447 LGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAM 506
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS L +GHGR+A+E F M G+ PD +F +L+AC+H GLVDEG + + M +DFG
Sbjct: 507 ISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG 566
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P HY ++DLLGR+G + +A LI +M +P +IW +L CR + + G
Sbjct: 567 ISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAA 626
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L + Q G Y+LL N YS+ G W +R+ M ++G++ PGCS I + +H F
Sbjct: 627 DQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVF 686
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+V D HP E+YQ L+ I +++ GYV + LH++ EK L HSEKLA+ F
Sbjct: 687 LVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGF 746
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
G+L PPG T+ V KNLRIC DCH +S RE+++RD RFHHF++G CSC
Sbjct: 747 GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 163/439 (37%), Gaps = 117/439 (26%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLY---STFEKSFEACKLFDEIPQRDT----------- 96
Q+H VL+ G + L+ LY T E S++A K+ DE+P +D
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 243
Query: 97 --------------------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
V WN +IS Y+++ DA LF + E+ D+ T
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEK--VPLDEFTF 301
Query: 137 LLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
VL ACA+ G G+ +H R + + + N+L+ +YSK G + +A +F
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 361
Query: 193 GMPEKDVVSWSA-------------------------------MISGLAMNGHGRDAIES 221
M KDVVSW+ M+SG G DA++
Sbjct: 362 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 421
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF------------------------- 256
F M+ V P D T+ G ++AC G + G
Sbjct: 422 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 481
Query: 257 ---LDRMSKDFGILPNIH--HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTL 308
++ F ++PN+ + ++ LG+ G +A +L M G+ PD + T+
Sbjct: 482 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 541
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGD--YVLLLNLYSSVGDWEKVKELREFMNEKG 366
L AC V G E + G+ Y L++L G ++ E R+ +
Sbjct: 542 LTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSG---RIGEARDLIKTMP 598
Query: 367 LQTTP--------GCSTIG 377
+ TP GC T G
Sbjct: 599 FEPTPSIWEAILSGCRTNG 617
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 43/282 (15%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
T+L+ + + +A FD +P +RDTV N ++S + R A+ +F L
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGE--KIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
S +PDD + ++ A + L ++H + + G + +++ N+LIA+Y KC +
Sbjct: 156 S-LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214
Query: 185 GMAFE---VFKGMPEKDVVSWS-------------------------------AMISGLA 210
+++ V MP+KD ++W+ AMISG
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LDRMSKDFGIL 267
+G DA E F M V D+ TFT VLSAC++ G G + R+ +F
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ +V L + G + A ++ +M +K D W T+L
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTIL 375
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 301/550 (54%), Gaps = 48/550 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y+ ++ +F KM + + N + A+ C L G +IH ++
Sbjct: 183 MVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 242
Query: 61 YQLDSQLMT--TLMDLYST----------------------------------------- 77
+LDS L+ +L+D Y+
Sbjct: 243 -ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAAL 301
Query: 78 --FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVT 135
F++ AC +F E+ RD V WN +IS ++ R+ +AL L +N S + + VT
Sbjct: 302 EFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL--SNVEVNTVT 359
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ L AC+ L AL G++IH++I G + + NSLI MY +CGS+ + +F MP
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D+VSW+ MIS M+G G DA+ F + G+ P+ TFT +LSACSH GL++EG
Sbjct: 420 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK 479
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ M ++ + P + Y C+VDLL RAG ++ + I M +P++ +W +LLGACRIH
Sbjct: 480 YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIH 539
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+ L E +L EL+ Q SG+YVL+ N+YS+ G WE ++R M E+G+ PGCS
Sbjct: 540 CNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSW 599
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +K +H FVV D SHP + +I ++ + +K GYV + L ++ +EK +L
Sbjct: 600 IEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLC 659
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEK+A+AFG+++T GT +R+ KNLR+C DCH+ K +S V R++I+RD RFHHF
Sbjct: 660 GHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFV 719
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 720 DGVCSCGDYW 729
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 176/433 (40%), Gaps = 87/433 (20%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF M + + + F K C + + G ++ +L G++ +S + ++
Sbjct: 93 EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSI 152
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D++ + A + F+EI +D WN+++S Y + AL +F + E G KP
Sbjct: 153 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLE--GVKP 210
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+ +T + AC +L L G +IH Y I S + + NSL+ Y+KC S+ +A
Sbjct: 211 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 270
Query: 191 FKGMPEKDVVSWSAM--ISGLAMNGHGRDAIESFGAMQRA-GVFPDDQT-----FTGVLS 242
F + + D+VSW+AM ++G G G+ A+E F M A VF + T + ++S
Sbjct: 271 FGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIIS 330
Query: 243 ACSHCGLVDEGMMFLDRMSKD---------FGILP------------NIHHY-------- 273
AC+ G + L M+ LP IH +
Sbjct: 331 ACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDT 390
Query: 274 -----GCVVDLLGRAGLLDQA----------------------------------YQLIT 294
++D+ GR G + ++ +Q
Sbjct: 391 CNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFR 450
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD-----YVLLLNLYSSV 349
+MG+KP+ + LL AC H L E ++ +K + + D Y +++L S
Sbjct: 451 TMGLKPNHITFTNLLSAC---SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRA 507
Query: 350 GDWEKVKELREFM 362
G + + E E M
Sbjct: 508 GQFNETLEFIEKM 520
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 6/230 (2%)
Query: 28 TNPFAC----SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE 83
TNP C + ++ C K +L G Q+HA+++ +G + L + L+++Y +
Sbjct: 4 TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 63
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD++ +R+ +W ++ Y + + LF + E G +PD V +AC
Sbjct: 64 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE--GVRPDHFVFPKVFKAC 121
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
+ L G+ ++ Y+ G+ + S++ M+ KCG + +A F+ + KDV W+
Sbjct: 122 SELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWN 181
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
M+SG G + A+ F M GV P+ T +SAC++ L+ G
Sbjct: 182 IMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 231
>gi|125578382|gb|EAZ19528.1| hypothetical protein OsJ_35094 [Oryza sativa Japonica Group]
Length = 591
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/428 (42%), Positives = 265/428 (61%), Gaps = 9/428 (2%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALC-------LFDNLNREES-GCKPDDVTCL 137
++FD I D AWN L+S Y R R RD C + + R S +P+++T +
Sbjct: 165 RVFDGIAHPDLPAWNALLSAYAR-LRARDVACATSAADAILELFVRMLSLAIEPNEITLV 223
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
V+ AC LGA+ G H Y + + +L+ MY+ CG L +A +VF ++
Sbjct: 224 AVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDR 283
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
D ++AM+ GLA++GHGR A+ M AGV D T V+ AC+H GLVDEG+ +
Sbjct: 284 DTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYF 343
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
DRM +FGI P I HYGC++D+L RAG L+ A +LI M + P++ I+R+L+ AC IH
Sbjct: 344 DRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGK 403
Query: 318 VTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIG 377
+ LGE++I L+ L+ +SG++VL+ N Y+ WE K+ R+ M G+ PG S +
Sbjct: 404 LELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDAKKARKEMKSMGIDKNPGSSLVD 463
Query: 378 LKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYH 437
+ GV+HEF+V D +HP EIY M++EI +L G + +S L ++ E+K + LSYH
Sbjct: 464 INGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYH 523
Query: 438 SEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREG 497
SE+LAIAF ++A+ PG IR+ KNLR+C DCH AK++S VY RE+++RDR RFHHFR+G
Sbjct: 524 SERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDG 583
Query: 498 RCSCNDYW 505
CSC D+W
Sbjct: 584 VCSCGDFW 591
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 3/188 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
+S+ + LF +M I N I C + ++ G+ H ++ ++ +
Sbjct: 197 TSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIV 256
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T L+++Y+ + A ++F RDT +N ++ + R AL L D ++ +
Sbjct: 257 ATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMH--GA 314
Query: 128 GCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G D VT L V+ ACAH G ++ G + R E G ++ +I M S+ G L
Sbjct: 315 GVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNN 374
Query: 187 AFEVFKGM 194
A ++ M
Sbjct: 375 AEKLIHEM 382
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 298/506 (58%), Gaps = 11/506 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ E +FE+M +K SF+ + S G L+ V
Sbjct: 186 LIDGYARCGEIELALEMFEEMPEKD--------SFSWTILIDGLSKSGKLEAARDVFDRM 237
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+S +++ Y S A +LFD++P+R V WN +I+ Y RN++ AL LF+
Sbjct: 238 PIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFE 297
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE+ P+ T L + A + + +L G +H YI + G+ + L LI MYSK
Sbjct: 298 VMLRED--ISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSK 355
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A VF+ +P+K + W+++I GL M+G +E F M R G+ P TF GV
Sbjct: 356 CGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGV 415
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH G ++ + M+ D+GI P+I HYGC++D+L RAG L++A I M +K
Sbjct: 416 LNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKA 475
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ IW +LL R H ++ +GE +HLI+L +G YV+L N+Y++ G WEKV+++RE
Sbjct: 476 NKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVRE 535
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +KG++ PGCS+I +G +HEF+V D SHP+ EIY L E+ K+L +AG++ + T
Sbjct: 536 MMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQ 595
Query: 421 ELHNLGAE-EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L L + EK L HSE+LAIAFG+L G+ IR+ KNLRIC DCH K+LS +Y
Sbjct: 596 VLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIY 655
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+IIRD RFHHF+ G CSC D+W
Sbjct: 656 NREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 33/309 (10%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYST--FEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
Q+HA ++ + + L+ LY+ A LFD I + V+WN+LI CYI
Sbjct: 33 QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92
Query: 109 NQRTRDALCLFDNLNREESGCK------PDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
NQR+ DA+ LF CK PD T VL+ CA LGAL+ G++IH + +
Sbjct: 93 NQRSNDAIALF---------CKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKI 143
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G+G + +SL++MYSKCG + + +VF M +KDVVSW+++I G A G A+E F
Sbjct: 144 GFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMF 203
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M F ++T ++ S G ++ DRM + N + +++ +
Sbjct: 204 EEMPEKDSF----SWTILIDGLSKSGKLEAARDVFDRMP-----IRNSVSWNAMINGYMK 254
Query: 283 AGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV 340
AG + A +L M P+ ++ W +++ +K T ++ E + L+ S +Y
Sbjct: 255 AGDSNTAKELFDQM---PERSLVTWNSMITGYERNKQFTKALKLFE--VMLREDISPNYT 309
Query: 341 LLLNLYSSV 349
+L S+
Sbjct: 310 TILGAVSAA 318
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 54/350 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQ----IHARV 56
+++ Y + + LF K+ +P SF + C +K C+ +G LQ IH V
Sbjct: 86 LIKCYIENQRSNDAIALFCKLLCDFVPD-----SFTLPCVLKGCARLGALQEGKQIHGLV 140
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
L+ G+ +D ++++L+ +YS + E C K+FD + +D V+WN LI Y R A
Sbjct: 141 LKIGFGVDKFVLSSLVSMYSKCGE-IELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L +F+ + + D + +++ + G LE + + S N++I
Sbjct: 200 LEMFEEMPEK------DSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS----WNAMI 249
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
Y K G A E+F MPE+ +V+W++MI+G N A++ F M R + P+
Sbjct: 250 NGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYT 309
Query: 236 TFTGVLSACS-----------HCGLVDEGM--------MFLDRMSK---------DFGIL 267
T G +SA S H +V G + ++ SK F +
Sbjct: 310 TILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSI 369
Query: 268 P--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
P + H+ V+ LG GL++Q +L M G+KP + + +L AC
Sbjct: 370 PKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 419
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 279/460 (60%), Gaps = 5/460 (1%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD---EIPQRDTVAWNVLISC 105
G Q+H RV+ + D+ + +LMD+Y + A +FD + + AW+ +++
Sbjct: 277 GRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAG 336
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y++N R +AL F + RE G V ACA+ G +E G ++H ++ + G+
Sbjct: 337 YVQNGREEEALEFFRRMLRE--GVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHR 394
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
L ++++ MYSK GSL A +F+ K+V W+ M+ A +G GR A+E F M
Sbjct: 395 FDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRM 454
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+ + P++ T VLSACSH GLV +G + + M +++GI+PN HY C+VDL GRAGL
Sbjct: 455 KAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGL 514
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
LD+A I + ++ +W+TLL ACR+HKH+ + E L++L+ ++G YVL+ N+
Sbjct: 515 LDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNM 574
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
Y++ W +LR M E+ ++ PG S I LK VVH FV D SHPR EIY L+++
Sbjct: 575 YATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKL 634
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
++LK GY + +H++ E++ +L +HSEKLAIAFG+++TP GT +R+ KNLR+C
Sbjct: 635 MERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVC 694
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH K ++ +RE+++RD RFHHF++G+CSC D+W
Sbjct: 695 EDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 143/344 (41%), Gaps = 47/344 (13%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N F + ++CC + G +IH +LR G D L ++D+Y+ A + F
Sbjct: 125 NAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAF 184
Query: 89 DEIPQRDTVAWNVLI-------------------------------SCYIRNQRTRDALC 117
+ Q+D +WN++I S +R+ T +AL
Sbjct: 185 GAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALG 244
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ R +G + T +V L + + G ++H + + SL+ M
Sbjct: 245 RLQQMVR--AGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDM 302
Query: 178 YSKCGSLGMAFEVF---KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
Y KCG + A +F E +WS M++G NG +A+E F M R GV
Sbjct: 303 YCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQ 362
Query: 235 QTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
T V SAC++ G+V++G F++++ F + +VD+ ++G L+ A +
Sbjct: 363 FILTSVASACANAGMVEQGRQVHGFVEKLGHRF----DAPLASAIVDMYSKSGSLEDACR 418
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+ S K + +W T+L + H G +E +KA++
Sbjct: 419 IFRSAQTK-NVALWTTMLCSYASHGQ---GRMALEIFSRMKAEK 458
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 101/242 (41%), Gaps = 34/242 (14%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD P R AW +IS R R D + F + E P+ VL+ C
Sbjct: 77 AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK------ 197
A LG +E G +IH +I G + LCN+++ MY+KCG G A F M +K
Sbjct: 137 AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196
Query: 198 -------------------------DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
DV SW+ ++SGL +GH +A+ M RAGV
Sbjct: 197 IVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTF 256
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC-VVDLLGRAGLLDQAYQ 291
+ T++ V + D G R+ +L GC ++D+ + G ++ A
Sbjct: 257 SNYTYSMVFALAGLLSSRDLGRQLHGRVV--VAVLEEDAFVGCSLMDMYCKCGEMESALS 314
Query: 292 LI 293
+
Sbjct: 315 IF 316
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + EE F +M ++ +P F + C + G Q+H V + G
Sbjct: 333 MVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLG 392
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D+ L + ++D+YS +AC++F ++ W ++ Y + + R AL +F
Sbjct: 393 HRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFS 452
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ E+ P+++T + VL AC+H G + G + E+G N ++ +Y
Sbjct: 453 RMKAEK--IMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYG 510
Query: 180 KCGSLGMAFE-VFKGMPEKDVVSWSAMISGLAMNGH 214
+ G L A + + + V W ++S ++ H
Sbjct: 511 RAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKH 546
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 287/493 (58%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF MRQ+ + + + + C +L G +IH ++R GY + + + L+
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y A +F + ++ V+W ++ Y +N + +A+ +F ++ R +G +PD
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQR--NGIEPD 370
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
D T V+ +CA+L +LE G + H G S + + N+LI +Y KCGS+ + ++F
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M +D VSW+A++SG A G + I+ F M G+ PD TF VLSACS GLV+
Sbjct: 431 EMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER 490
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + + M KD GI+P HY C++DL GRAG L++A I M PDS W TLL +C
Sbjct: 491 GQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R++ + +G+ E L+EL Q Y+LL ++Y++ G W V +LR M EKG + PG
Sbjct: 551 RLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPG 610
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I K V+ F DD S P ++IY L+++N ++ GYV + +S LH++ EK
Sbjct: 611 FSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMK 670
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L++HSEKLAIAFG+L P G IRV KNLR+C DCHN K +S + RE+++RD +RFH
Sbjct: 671 MLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFH 730
Query: 493 HFREGRCSCNDYW 505
F++G CSC D+W
Sbjct: 731 LFKDGTCSCGDFW 743
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 34/257 (13%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL 87
TNP +F + S +G + V Q +S T++ YS ++
Sbjct: 36 TNP--ETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEI 93
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F +P RD V+WN LIS Y+ +A+ ++++ ++ + +T +L + G
Sbjct: 94 FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD-GVLNLNRITFSTMLLLVSSQG 152
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK--------------- 192
++ G +IH I + G+G+ + + +SL+ MY+K G + +A +VF
Sbjct: 153 CVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMIT 212
Query: 193 ----------------GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
GM E+D +SW+ MI+GL NG +A++ F M++ G+ D T
Sbjct: 213 GLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYT 272
Query: 237 FTGVLSACSHCGLVDEG 253
F VL+AC + EG
Sbjct: 273 FGSVLTACGGLRALKEG 289
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 33/174 (18%)
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF----------------------- 188
+K+H I + + L N+LI YSK G++ A
Sbjct: 24 AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83
Query: 189 --------EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-TFTG 239
E+F MP +D VSW+++ISG G +A++++ +M + GV ++ TF+
Sbjct: 84 SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
+L S G VD G ++ K FG + +VD+ + GL+ A Q+
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVK-FGFGAYVFVGSSLVDMYAKMGLVSVASQVF 196
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 284/494 (57%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F MR++ + + F +CC ++ G Q+HA V+R G D + ++L
Sbjct: 155 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 214
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y E + +P V+ N +I+ +N + AL F + G
Sbjct: 215 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMR--SVGVAA 272
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D VT + + +C+ L AL G++IH + + G + + L+ MYS+CG LG + VF
Sbjct: 273 DVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF 332
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
G D SAMIS +GHG+ AIE F M G P D TF +L ACSH GL +
Sbjct: 333 FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 392
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EGM + M+K +G+ P++ HY CVVDLLGR+G LD+A LI SM + PD IW+TLL A
Sbjct: 393 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C+ K+ + ER+ + +IEL +S YVLL N+ ++ W V E+R+ M + ++ P
Sbjct: 453 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 512
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + LKG +H+F D SHPR EI + L+E+ +++ GY +++ LH++ EEK
Sbjct: 513 GVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKE 572
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+LS+HSEKLAIAF L+ P G IRV KNLR+C DCH K++S V RE+++RD RF
Sbjct: 573 VSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRF 632
Query: 492 HHFREGRCSCNDYW 505
HHF++GRCSC DYW
Sbjct: 633 HHFKDGRCSCRDYW 646
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 134/328 (40%), Gaps = 36/328 (10%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA G D LM Y+ A +LF+ IP+R+ ++WN+L YI+N
Sbjct: 62 QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNG 121
Query: 111 RTRDALCLFDN-----------------------------LNREESGCKPDDVTCLLVLQ 141
A LFD L+ G PD+ V +
Sbjct: 122 DLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFR 181
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
CA L + G ++H Y+ G M + +SL MY +CG L V + +P +VS
Sbjct: 182 CCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 241
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
+ +I+G NG A+E F M+ GV D TF +S+CS + +G ++
Sbjct: 242 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVM 301
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
K G+ + C+V + R G L + ++ D+ + ++ A H H G
Sbjct: 302 KA-GVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHGH---G 356
Query: 322 ERVIEHLIEL--KAQESGDYVLLLNLYS 347
++ IE ++ E D L LY+
Sbjct: 357 QKAIELFKQMMNGGAEPSDVTFLALLYA 384
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 118 LFDNLNREESGCKPDDVTCLL--VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L D L R G D L + +AC L L ++H + + G + N L+
Sbjct: 27 LRDALRRPFRGVLWSDAARLFSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLM 83
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
Y+ G L A E+F+ +P ++V+SW+ + G NG A + F M V
Sbjct: 84 LAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----A 139
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD-----QAY 290
T+ +++ ++ G +E + F M ++ G+ P+ G V AGL D Q +
Sbjct: 140 TWNAMVAGLTNLGFDEESLGFFLDMRRE-GMHPDEFGLGSVFRCC--AGLRDVVTGRQVH 196
Query: 291 QLITSMGVKPDSTIWRTL 308
+ G+ D + +L
Sbjct: 197 AYVVRSGLDRDMCVGSSL 214
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 303/506 (59%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + S LF +++ + I + S + C + +IH+ ++R G
Sbjct: 455 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG 514
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D L ++D+Y A ++F+ I +D V+W +ISCY+ N +AL LF
Sbjct: 515 LS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 573
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E+G +PD ++ + +L A A L AL+ G++IH ++ G+ + +L ++L+ MY++
Sbjct: 574 LM--KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYAR 631
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L + VF + KD+V W++MI+ M+G GR AI+ F M+ + PD F V
Sbjct: 632 CGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAV 691
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL++EG FL+ M ++ + P HY C+VDLLGRA L++AYQ + M V+P
Sbjct: 692 LYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEP 751
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGAC+IH + LGE + L+E+ + G+YVL+ N+YS+ W+ V+ +R
Sbjct: 752 TAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRM 811
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEIT 419
M GL+ PGCS I + VH F+ D SHP+ EIY L +I ++L K GYVA+
Sbjct: 812 RMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTK 871
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LHN EEK L HSE+LAIA+G+L TP G ++R+ KNLR+C DCHNF K++S +
Sbjct: 872 FVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFF 931
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC D W
Sbjct: 932 ERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 186/372 (50%), Gaps = 14/372 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS + E LF +M++ + N + A++ C + G+ IHA VL+
Sbjct: 253 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 312
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y ++ + L+ +Y+ F K EA +F + DT++WN ++S +++N +AL +
Sbjct: 313 YYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYH 372
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G KPD V + ++ A A G G +IH Y ++G S + + NSL+ MY+K
Sbjct: 373 EM--RDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 430
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
S+ +F MP+KDVVSW+ +I+G A NG A+E F +Q G+ D + +
Sbjct: 431 FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSI 490
Query: 241 LSACSHCGL---VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
L ACS L V E ++ R +L N +VD+ G G +D A ++ +
Sbjct: 491 LLACSGLKLISSVKEIHSYIIRKGLSDLVLQN-----GIVDVYGECGNVDYAARMFELIE 545
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE--SGDYVLLLNLYSSVGDWEKV 355
K D W +++ +C +H + + HL++ E S V +L+ +S+ +K
Sbjct: 546 FK-DVVSWTSMI-SCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG 603
Query: 356 KELREFMNEKGL 367
KE+ F+ KG
Sbjct: 604 KEIHGFLIRKGF 615
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 11/306 (3%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFC----SLMGGLQIHARVLRDGYQLDS 65
S E F + + P+ F+ A ++ C +L G Q+HA ++ +S
Sbjct: 55 SVNEAFQSLTDLFANQSPSQ-FSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNS 113
Query: 66 QLMTT-LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
++T L+ +Y +A KLFD +P + WN +I Y+ N +L L+ +
Sbjct: 114 VFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM-- 171
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
SG D T +L+AC L +G ++H + GY S + + NS++ MY+KC L
Sbjct: 172 RVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDL 231
Query: 185 GMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A ++F MPEK DVVSW++MIS + NG +A+ FG MQ+A + P+ TF L A
Sbjct: 232 NGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA 291
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C + +G MF+ N+ ++ + R G + +A + +M D+
Sbjct: 292 CEDSSFIKQG-MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD-DWDTI 349
Query: 304 IWRTLL 309
W ++L
Sbjct: 350 SWNSML 355
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 180/376 (47%), Gaps = 20/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
M+ AY + P L+ +MR IP + AC+F C +K C L+ G ++H
Sbjct: 151 MIGAYVTNGEPLGSLELYREMRVSGIPLD--ACTFP--CILKACGLLKDRRYGAEVHGLA 206
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRNQRTRDA 115
+++GY + +++ +Y+ A +LFD +P++ D V+WN +IS Y N ++ +A
Sbjct: 207 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 266
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L LF + +++ P+ T + LQAC ++ G IH + + Y + + N+LI
Sbjct: 267 LRLFGEM--QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 324
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
AMY++ G +G A +F M + D +SW++M+SG NG +A++ + M+ AG PD
Sbjct: 325 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 384
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+++A + G GM K+ G+ ++ +VD+ + + +
Sbjct: 385 AVISIIAASARSGNTLHGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDK 443
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLY----SSVGD 351
M K D W T++ H R +E E++ + V++++ S +
Sbjct: 444 MPDK-DVVSWTTIIAG---HAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499
Query: 352 WEKVKELREFMNEKGL 367
VKE+ ++ KGL
Sbjct: 500 ISSVKEIHSYIIRKGL 515
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 139 VLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
VL+ C AL G+++H + I+ + + + L L+ MY KCG L A ++F GMP K
Sbjct: 84 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 143
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
+ +W+AMI NG ++E + M+ +G+ D TF +L A CGL+ +
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKA---CGLLKDRRYGA 200
Query: 258 D--RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ ++ G + + +V + + L+ A QL M K D W +++ A
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 256
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 284/494 (57%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F MR++ + + F +CC ++ G Q+HA V+R G D + ++L
Sbjct: 217 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 276
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y E + +P V+ N +I+ +N + AL F + G
Sbjct: 277 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMR--SVGVAA 334
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D VT + + +C+ L AL G++IH + + G + + L+ MYS+CG LG + VF
Sbjct: 335 DVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF 394
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
G D SAMIS +GHG+ AIE F M G P D TF +L ACSH GL +
Sbjct: 395 FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 454
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EGM + M+K +G+ P++ HY CVVDLLGR+G LD+A LI SM + PD IW+TLL A
Sbjct: 455 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C+ K+ + ER+ + +IEL +S YVLL N+ ++ W V E+R+ M + ++ P
Sbjct: 515 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 574
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S + LKG +H+F D SHPR EI + L+E+ +++ GY +++ LH++ EEK
Sbjct: 575 GVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKE 634
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+LS+HSEKLAIAF L+ P G IRV KNLR+C DCH K++S V RE+++RD RF
Sbjct: 635 VSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRF 694
Query: 492 HHFREGRCSCNDYW 505
HHF++GRCSC DYW
Sbjct: 695 HHFKDGRCSCRDYW 708
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 134/328 (40%), Gaps = 36/328 (10%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA G D LM Y+ A +LF+ IP+R+ ++WN+L YI+N
Sbjct: 124 QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNG 183
Query: 111 RTRDALCLFDN-----------------------------LNREESGCKPDDVTCLLVLQ 141
A LFD L+ G PD+ V +
Sbjct: 184 DLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFR 243
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
CA L + G ++H Y+ G M + +SL MY +CG L V + +P +VS
Sbjct: 244 CCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 303
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
+ +I+G NG A+E F M+ GV D TF +S+CS + +G ++
Sbjct: 304 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVM 363
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
K G+ + C+V + R G L + ++ D+ + ++ A H H G
Sbjct: 364 KA-GVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHGH---G 418
Query: 322 ERVIEHLIEL--KAQESGDYVLLLNLYS 347
++ IE ++ E D L LY+
Sbjct: 419 QKAIELFKQMMNGGAEPSDVTFLALLYA 446
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 118 LFDNLNREESGCKPDDVTCLL--VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L D L R G D L + +AC L L ++H + + G + N L+
Sbjct: 89 LRDALRRPFRGVLWSDAARLFSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLM 145
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
Y+ G L A E+F+ +P ++V+SW+ + G NG A + F M V
Sbjct: 146 LAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----A 201
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD-----QAY 290
T+ +++ ++ G +E + F M ++ G+ P+ G V AGL D Q +
Sbjct: 202 TWNAMVAGLTNLGFDEESLGFFLDMRRE-GMHPDEFGLGSVFRCC--AGLRDVVTGRQVH 258
Query: 291 QLITSMGVKPDSTIWRTL 308
+ G+ D + +L
Sbjct: 259 AYVVRSGLDRDMCVGSSL 276
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/540 (36%), Positives = 300/540 (55%), Gaps = 41/540 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
M+ Y +E + +M I + F I+ C L G Q+HA VLR
Sbjct: 257 MISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE 316
Query: 60 --GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI---------- 107
+ D+ L+T LY K EA +F+++P +D V+WN L+S Y+
Sbjct: 317 DFSFHFDNSLVT----LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 108 ---------------------RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
N + L LF + RE G +P D +++CA L
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE--GFEPCDYAFSGAIKSCAVL 430
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GA G++ H + + G+ S ++ N+LI MY+KCG + A +VF+ MP D VSW+A+I
Sbjct: 431 GAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALI 490
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+ L +GHG +A++ + M + G+ PD TF VL+ACSH GLVD+G + + M + I
Sbjct: 491 AALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRI 550
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P HY ++DLL R+G +A +I S+ KP + IW LL CR+H ++ LG +
Sbjct: 551 PPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAAD 610
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
L L + G Y+LL N+Y++ G WE+V +R+ M ++G++ CS I ++ VH F+
Sbjct: 611 KLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFL 670
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE-EKGNALSYHSEKLAIAF 445
VDD SHP +Y+ L ++ K+++ GYV + + LH++ ++ K + L+ HSEK+A+AF
Sbjct: 671 VDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAF 730
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G++ PPGTTIR+ KNLR C DCHNF + LS V R++I+RDR RFHHFR G CSC ++W
Sbjct: 731 GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 186/450 (41%), Gaps = 93/450 (20%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL---------- 50
M+ +S ++ LF KM+ + + F + S++ GL
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDDFT----------YASVLAGLALVVDDEKQC 168
Query: 51 -QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS----FEACKLFDEIPQRDTVAWNVLISC 105
Q HA L+ G + + L+ +YS S A K+FD+IP++D +W +++
Sbjct: 169 VQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTG 228
Query: 106 YIRN---QRTRDALCLFDN------------------LNRE---------ESGCKPDDVT 135
Y++N ++ L D L +E SG + D+ T
Sbjct: 229 YVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFT 288
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
V++ACA+ L+ G+++H Y+ S + NSL+ +Y KCG A +F+ MP
Sbjct: 289 YPSVIRACANARLLQLGKQVHAYVLRREDFS-FHFDNSLVTLYYKCGKFNEARAIFEKMP 347
Query: 196 EKDVVSWSA-------------------------------MISGLAMNGHGRDAIESFGA 224
KD+VSW+A MISGLA NG G + ++ F
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M+R G P D F+G + +C+ G G F ++ K G ++ ++ + + G
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVK-IGFDSSLSAGNALITMYAKCG 466
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
++++A Q+ +M DS W L+ A H H V E + LK D + L
Sbjct: 467 VVEEAQQVFRTMPCL-DSVSWNALIAALGQHGHGVEAVDVYEEM--LKKGIRPDRITFLT 523
Query: 345 LYSSVGDWEKVKELREFMN--EKGLQTTPG 372
+ ++ V + R++ N E + PG
Sbjct: 524 VLTACSHAGLVDQGRKYFNSMETVYRIPPG 553
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 168/419 (40%), Gaps = 88/419 (21%)
Query: 25 RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
R N +A + + ++ SL +H ++ G+Q + ++ L+D+Y + A
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYA 68
Query: 85 CKLFDEIPQ---------------------------------RDTVAWNVLISCYIRNQR 111
+LFDEI + RDTV +N +I+ + N
Sbjct: 69 RQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNND 128
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK----IHRYISEHGYGSK 167
A+ LF + E G KPDD T VL A L + EK H + G G
Sbjct: 129 GYSAINLFCKMKHE--GFKPDDFTYASVL---AGLALVVDDEKQCVQFHAAALKSGAGYV 183
Query: 168 MNLCNSLIAMYSKCGS----LGMAFEVFKGMPEKDVVSWSAMISGLAMNG---------H 214
++ N+L+++YS+C S L A +VF +PEKD SW+ M++G NG
Sbjct: 184 TSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLK 243
Query: 215 GRD-----------------------AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
G D A+E M +G+ D+ T+ V+ AC++ L+
Sbjct: 244 GMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQ 303
Query: 252 EGMMFLDRM--SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
G + +DF + H +V L + G ++A + M K D W LL
Sbjct: 304 LGKQVHAYVLRREDF----SFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALL 358
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
H+ + + + E+K + ++++++ + G E+ +L M +G +
Sbjct: 359 SGYVSSGHIGEAKLIFK---EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 304/506 (60%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + S LF +++ + I + S + C + +IH+ ++R G
Sbjct: 491 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG 550
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D L ++D+Y A ++F+ I +D V+W +ISCY+ N +AL LF
Sbjct: 551 LS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 609
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E+G +PD ++ + +L A A L AL+ G++IH ++ G+ + +L ++L+ MY++
Sbjct: 610 LM--KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYAR 667
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L + VF + KD+V W++MI+ M+G GR AI+ F M+ + PD F V
Sbjct: 668 CGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAV 727
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL++EG FL+ M ++ + P HY C+VDLLGRA L++AYQ + M V+P
Sbjct: 728 LYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEP 787
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGAC+IH + LGE + L+E+ + G+YVL+ N+Y++ W+ V+E+R
Sbjct: 788 TAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRM 847
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEIT 419
M GL+ PGCS I + VH F+ D SHP+ EIY L +I ++L K GYVA+
Sbjct: 848 RMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTK 907
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LHN EEK L HSE+LAIA+G+L TP G ++R+ KNLR+C DCHNF K++S +
Sbjct: 908 FVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFF 967
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC D W
Sbjct: 968 ERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 186/372 (50%), Gaps = 14/372 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS + E LF +M++ + N + A++ C + G+ IHA VL+
Sbjct: 289 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 348
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y ++ + L+ +Y+ F K EA +F + DT++WN ++S +++N +AL +
Sbjct: 349 YYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYH 408
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++G KPD V + ++ A A G G +IH Y ++G S + + NSL+ MY+K
Sbjct: 409 EM--RDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 466
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
S+ +F MP+KDVVSW+ +I+G A NG A+E F +Q G+ D + +
Sbjct: 467 FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSI 526
Query: 241 LSACSHCGL---VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
L ACS L V E ++ R +L N +VD+ G G +D A ++ +
Sbjct: 527 LLACSGLKLISSVKEIHSYIIRKGLSDLVLQN-----GIVDVYGECGNVDYAARMFELIE 581
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE--SGDYVLLLNLYSSVGDWEKV 355
K D W +++ +C +H + + HL++ E S V +L+ +S+ +K
Sbjct: 582 FK-DVVSWTSMI-SCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG 639
Query: 356 KELREFMNEKGL 367
KE+ F+ KG
Sbjct: 640 KEIHGFLIRKGF 651
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 145/306 (47%), Gaps = 11/306 (3%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFC----SLMGGLQIHARVLRDGYQLDS 65
S E F + + P+ F+ A ++ C +L G Q+HA ++ +S
Sbjct: 91 SVNEAFQSLTDLFANQSPSQ-FSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNS 149
Query: 66 QLMTT-LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
++T L+ +Y +A KLFD +P + WN +I Y+ N +L L+ +
Sbjct: 150 VFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM-- 207
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
SG D T +L+AC L G ++H + GY S + + NS++ MY+KC L
Sbjct: 208 RVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDL 267
Query: 185 GMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A ++F MPEK DVVSW++MIS + NG +A+ FG MQ+A + P+ TF L A
Sbjct: 268 NGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA 327
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C + +G MF+ N+ ++ + R G + +A + +M D+
Sbjct: 328 CEDSSFIKQG-MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD-DWDTI 385
Query: 304 IWRTLL 309
W ++L
Sbjct: 386 SWNSML 391
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 180/376 (47%), Gaps = 20/376 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
M+ AY + P L+ +MR IP + AC+F C +K C L+ G ++H
Sbjct: 187 MIGAYVTNGEPLGSLELYREMRVSGIPLD--ACTFP--CILKACGLLKDRRCGAEVHGLA 242
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRNQRTRDA 115
+++GY + +++ +Y+ A +LFD +P++ D V+WN +IS Y N ++ +A
Sbjct: 243 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 302
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L LF + +++ P+ T + LQAC ++ G IH + + Y + + N+LI
Sbjct: 303 LRLFGEM--QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 360
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
AMY++ G +G A +F M + D +SW++M+SG NG +A++ + M+ AG PD
Sbjct: 361 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 420
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+++A + G GM K+ G+ ++ +VD+ + + +
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDK 479
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLY----SSVGD 351
M K D W T++ H R +E E++ + V++++ S +
Sbjct: 480 MPDK-DVVSWTTIIAG---HAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 535
Query: 352 WEKVKELREFMNEKGL 367
VKE+ ++ KGL
Sbjct: 536 ISSVKEIHSYIIRKGL 551
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 139 VLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
VL+ C AL G+++H + I+ + + + L L+ MY KCG L A ++F GMP K
Sbjct: 120 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 179
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----HCGLVDE 252
+ +W+AMI NG ++E + M+ +G+ D TF +L AC CG
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G+ + G + + +V + + L+ A QL M K D W +++ A
Sbjct: 240 GLAIKE------GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 292
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 291/507 (57%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y S E +F+KM + + A+ C L G +H V D
Sbjct: 203 MIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLV--DQ 260
Query: 61 YQLDS--QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+LDS +M +L+ +YS ++ A +F + + V+WN +I Y +N +AL
Sbjct: 261 LKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNA 320
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + KPD T + V+ A A L + IH + + + +L+ MY
Sbjct: 321 FCEM--QSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMY 378
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCG++ A ++F M + V++W+AMI G +G G+ ++E F M++ + P+D TF
Sbjct: 379 AKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFL 438
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
LSACSH GLV+EG+ F + M KD+GI P + HYG +VDLLGRAG L+QA+ I M +
Sbjct: 439 CALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPI 498
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KP T++ +LGAC+IHK+V LGE+ + +L + G +VLL N+Y++ W KV ++
Sbjct: 499 KPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKV 558
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M + GLQ TPGCS + + VH F SHP+ +IY L+ + +++ AGYV +
Sbjct: 559 RTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPD- 617
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
T+ +H++ + K L+ HSEKLAIAFG+L T GT I + KNLR+C DCHN K +S V
Sbjct: 618 TNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLV 677
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH F++G CSC DYW
Sbjct: 678 TGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ Y+ SSS + F +M+ + + ++ +K C L G +IH V+ G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + MT ++++Y+ + +A +FD +P+RD V WN +IS Y +N + AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV- 119
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E G +PD +T + +L A A L G +H Y+ G+ S +N+ +L+ MYSK
Sbjct: 120 -LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ +A +F GM + VVSW++MI G +G A+ F M GV P + T G
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238
Query: 241 LSACSHCGLVDEG 253
L AC+ G ++ G
Sbjct: 239 LHACADLGDLERG 251
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
++ Y ++ AL F + + +P +L+ C L+ G++IH +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDS--VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVIT 58
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
G+ + ++ MY+KC + A+ +F MPE+D+V W+ MISG A NG + A+
Sbjct: 59 SGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALML 118
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
M G PD T +L A + L+ GM
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGM 151
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 304/509 (59%), Gaps = 14/509 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + EE LF++M I + I C S G + A ++R
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISAC----SSRGDPCLAASLVRTL 286
Query: 61 YQLDSQL----MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+Q QL T L+D+Y+ F A KLF+ +P R+ V WN +I+ Y +N ++ A+
Sbjct: 287 HQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 346
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + + PD+VT + V+ AC HLGALE G + R+++E+ ++ N++I
Sbjct: 347 ELFKEMITAKK-LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIF 405
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MYS+CGS+ A VF+ M +DVVS++ +ISG A +GHG +AI M+ G+ PD T
Sbjct: 406 MYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVT 465
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F GVL+ACSH GL++EG + + KD P I HY C+VDLLGR G L+ A + + M
Sbjct: 466 FIGVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGRVGELEDAKRTMERM 520
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++P + ++ +LL A RIHK V LGE L EL+ SG+++LL N+Y+S G W+ V+
Sbjct: 521 PMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVE 580
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+RE M + G++ T G S + G +H+F+V D SH R ++IYQ+L E+ K+++ AGY+A
Sbjct: 581 RIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIA 640
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ + L ++ EEK + HSEKLAI + +L + G IRV KNLR+C DCH K++S
Sbjct: 641 DKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMIS 700
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R +I+RD RFH F +G CSC DYW
Sbjct: 701 KLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 5/250 (2%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T ++ Y+ + A + FD +P+R V+WN ++S Y +N +AL LFD + +G
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM--VNAG 255
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD+ T + V+ AC+ G + R + + + +L+ MY+K G L A
Sbjct: 256 IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSAR 315
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFTGVLSACSHC 247
++F MP ++VV+W++MI+G A NG AIE F M A + PD+ T V+SAC H
Sbjct: 316 KLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 375
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
G ++ G ++ R + I +I + ++ + R G ++ A ++ M + D + T
Sbjct: 376 GALELG-NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNT 433
Query: 308 LLGACRIHKH 317
L+ H H
Sbjct: 434 LISGFAAHGH 443
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 162/400 (40%), Gaps = 85/400 (21%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS + ++E+M+ + + F IK + GG+ HA VL+ G
Sbjct: 71 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS-----AGTGGIGFHAHVLKLG 125
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
+ D+ + ++D+Y+ A K+FDEIP +R WN ++S Y + + A L
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
FD + P+ + +++ Y
Sbjct: 186 FDVM--------PE---------------------------------RNVITWTAMVTGY 204
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K L A F MPE+ VVSW+AM+SG A NG +A+ F M AG+ PD+ T+
Sbjct: 205 AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWV 264
Query: 239 GVLSACSHCG--------------------------LVDEGMMF--LDRMSKDFGILP-- 268
V+SACS G L+D F LD K F +P
Sbjct: 265 TVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGR 324
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQL----ITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
N+ + ++ + G A +L IT+ + PD +++ AC + LG V
Sbjct: 325 NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWV 384
Query: 325 IEHLIE--LKAQESGDYVLLLNLYSSVGDWEKVKELREFM 362
+ L E +K SG ++ +YS G E K + + M
Sbjct: 385 VRFLTENQIKLSISGHNAMIF-MYSRCGSMEDAKRVFQEM 423
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/506 (38%), Positives = 294/506 (58%), Gaps = 10/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV S + + EE +F M + A S+ + S G + + R+
Sbjct: 109 MVSGLSKNGAIEEAEAMFRAMPARN------AVSWNAMVAARASS--GDMGAAENLFRNA 160
Query: 61 YQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D+ L T ++ Y +A + F +P R+ V+WN +++ Y++N R DAL +F
Sbjct: 161 PEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVF 220
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E++ +P+ T VL C++L AL FG ++H++ + G + + SL++MY
Sbjct: 221 KTM-VEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYC 279
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A ++F M KD+V+W+AMISG A +G GR AI+ F M+ GV PD T
Sbjct: 280 KCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLA 339
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+AC H GL D G+ + M + + I P + HY C+VDLL RAGLL++A +I SM +
Sbjct: 340 VLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFE 399
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P + + TLL ACR++K++ E LIE Q +G YV L N+Y+ W+ V +R
Sbjct: 400 PHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVR 459
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+M + + TPG S + +KGV HEF +D HP+++ I+ LD + K +K GY ++
Sbjct: 460 RWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLD 519
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ K L HSEKLAIAFG+++T PG T+R+ KNLRIC DCHN AK++S +
Sbjct: 520 FALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIE 579
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD RFHHFR G CSC DYW
Sbjct: 580 DREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 47/299 (15%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL-LVLQ 141
+A +LFD IP D V++N L+SC+ A D R S DVT ++
Sbjct: 59 DARRLFDSIPHPDAVSYNTLLSCHF-------ACGDIDGAWRVFSTMPVRDVTSWNTMVS 111
Query: 142 ACAHLGALEFGEKIHRYI----------------SEHGYGSKMN------------LCNS 173
+ GA+E E + R + S G+ N L +
Sbjct: 112 GLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTA 171
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFP 232
+++ Y G++ A E F+ MP +++VSW+A+++G N DA+ F M + A V P
Sbjct: 172 MVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQP 231
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ T + VL CS+ + G + + + +I ++ + + G LD A +L
Sbjct: 232 NPSTLSSVLLGCSNLSALGFGRQ-VHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKL 290
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYSS 348
M K D W ++ H G R L E K ++ G D++ LL + ++
Sbjct: 291 FDEMHTK-DIVAWNAMISGYAQHG----GGRKAIKLFE-KMKDEGVVPDWITLLAVLTA 343
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 212/518 (40%), Positives = 294/518 (56%), Gaps = 25/518 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-------IPTNPFACSFAIKCCMKFCSLMGGLQIH 53
M+ YS +S P LF KMR++ + N + C L G+ +H
Sbjct: 125 MISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLH 184
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
+R G+ D + +L+ +Y + A K+FDE+ RD + WN +IS Y +N R
Sbjct: 185 GCCVRFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHAR 244
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
L ++ + + SG D VT L V+ ACA+LGA G ++ R I G+G L N+
Sbjct: 245 CVLEVYSEM--KLSGVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNA 302
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+ MY++CG+L A EVF EK VVSW+A+I G ++GHG A+E F M + V PD
Sbjct: 303 LVNMYARCGNLTRAREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPD 362
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
F VLSACSH GL D G+ + M + +G+ P HY CVVDLLGRAG L++A LI
Sbjct: 363 KTVFVSVLSACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLI 422
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWE 353
SM VKPD +W LLGAC+IHK+ + E +H++EL+ G YVLL N+Y+ + E
Sbjct: 423 KSMKVKPDGAVWGALLGACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLE 482
Query: 354 KVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG 413
V +R M E+ L+ PG S + KG ++ F D+SHP+ +IY+MLDE+ +K
Sbjct: 483 GVSRVRVMMRERKLRKDPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVK--- 539
Query: 414 YVAEITSELHNLGAEEKGNA------LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
E+H + +G + HSEKLAIAF +L T GT I V KNLR+CVD
Sbjct: 540 -------EVHPPNEKCQGRSEELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVD 592
Query: 468 CHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
CH F K++S + NR+ I+RD RFHHFR+G CSC DYW
Sbjct: 593 CHLFIKLVSKIVNRQFIVRDATRFHHFRDGICSCKDYW 630
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 185/409 (45%), Gaps = 51/409 (12%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R S E L+ M + N F F +K C + Q+HA V+R G
Sbjct: 26 LRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHVIRTGS 85
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
Q D ++L++ Y+ A K+FDE+P T+ +N +IS Y N + A+CLF
Sbjct: 86 QPDPYTRSSLINTYAKCSLHHHARKVFDEMPN-PTICYNAMISGYSFNSKPLHAVCLFRK 144
Query: 122 LNREES-----GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+ REE + VT L ++ C+ L G +H G+ + + + NSL+
Sbjct: 145 MRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVANSLVT 204
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCG + +A +VF M +D+++W+AMISG A NGH R +E + M+ +GV D T
Sbjct: 205 MYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSADAVT 264
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKD-FGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
GV+SAC++ G G + + FG P + + +V++ R G L +A ++
Sbjct: 265 LLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRN--ALVNMYARCGNLTRAREVFDR 322
Query: 296 MG----------------------------------VKPDSTIWRTLLGACRIHKHVTLG 321
G V+PD T++ ++L AC H L
Sbjct: 323 SGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSAC---SHAGLT 379
Query: 322 ERVIEHLIELKAQ---ESGD--YVLLLNLYSSVGDWEKVKELREFMNEK 365
+R +E+ E++ + + G Y +++L G E+ L + M K
Sbjct: 380 DRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVK 428
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 16/264 (6%)
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
T AWN + + ++ R+AL L+ ++ R S P+ T +L++CA L ++
Sbjct: 19 TTAWNNQLRQLSKQRQYREALTLYRHMLR--SSFFPNTFTFPFLLKSCAFLSLPLAASQL 76
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H ++ G +SLI Y+KC A +VF MP + ++AMISG + N
Sbjct: 77 HAHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNP-TICYNAMISGYSFNSKP 135
Query: 216 RDAIESFGAMQR-------AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
A+ F M+R V + T ++S CS + G+ L FG +
Sbjct: 136 LHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVC-LHGCCVRFGFVT 194
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
++ +V + + G ++ A ++ M V+ D W ++ + H V+E
Sbjct: 195 DLAVANSLVTMYVKCGEVELARKVFDEMLVR-DLITWNAMISGYAQNGHARC---VLEVY 250
Query: 329 IELK-AQESGDYVLLLNLYSSVGD 351
E+K + S D V LL + S+ +
Sbjct: 251 SEMKLSGVSADAVTLLGVMSACAN 274
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 305/506 (60%), Gaps = 7/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + +++ ++ LF +M ++ + N F +++ K SL+ Q+HA++++
Sbjct: 379 MIGGFVQNNNNKKAVDLFCQMSREGVRPNHF--TYSTVLAGKPSSLLS--QLHAQIIKAY 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + T L+D Y E+ ++F IP +D VAW+ +++ + + + A+ +F
Sbjct: 435 YEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFI 494
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L +E G KP++ T V+ AC+ A +E G++IH + G + + + ++L+ MYS
Sbjct: 495 QLVKE--GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYS 552
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G++ A +VF E+D+VSW++MI+G +G + A+E F MQ G+ DD TF G
Sbjct: 553 KKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIG 612
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+AC+H GLV+EG + + M KD+ I HY C+VDL RAG+ D+A +I M
Sbjct: 613 VLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFP 672
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
TIWRTLL ACR+H+++ LG+ E L+ L+ ++ YVLL N+++ G+WE+ +R
Sbjct: 673 ASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVR 732
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M+E+ ++ GCS I +K + F+ DVSHP + +Y L+E++ +LK GY +
Sbjct: 733 KLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTN 792
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
H++ E K LS HSE+LAIA+G++A PPG I++ KNLRIC DCHN +++S +
Sbjct: 793 YVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIE 852
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF+ G CSC YW
Sbjct: 853 ERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 25/318 (7%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S ++ E +LF+ + + + S A+K C + G Q+H + L+ G+ D
Sbjct: 79 FSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLED 138
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T+L+D+Y E + +FDE+ ++ V+W L+S Y RN + + L + +
Sbjct: 139 VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQM 198
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
E G P+ T VL A A +E G ++H I ++G+ +CN+LI MY K +
Sbjct: 199 E--GVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
G A VF M +D V+W+ MI G A G + + F M+ AGV F L C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 245 S-----------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
S HCG+V G F ++D + + C +D+A++L
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEF----AQDIRTALMVTYSKC--------SSVDEAFKLF 364
Query: 294 TSMGVKPDSTIWRTLLGA 311
+ + W ++G
Sbjct: 365 SMADAAHNVVTWTAMIGG 382
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 123/244 (50%), Gaps = 3/244 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + +E +L +M+ + + N F + + + GG+Q+HA ++++G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + + L+ +Y E +A +FD + RD+V WN++I Y + +F
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G K L+ C+ L F +++H + ++GY ++ +L+ YSK
Sbjct: 296 RMRL--AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 181 CGSLGMAFEVFK-GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
C S+ AF++F +VV+W+AMI G N + + A++ F M R GV P+ T++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413
Query: 240 VLSA 243
VL+
Sbjct: 414 VLAG 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDE P +D +N L+ + RN R+AL LF +L+ SG D +T L+ C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLH--SSGLGVDGLTLSCALKVC 114
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L G ++H + G+ +++ SL+ MY K +F M K+VVSW+
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+++SG A NG + I MQ GV P+ TF VL A + +++ G+ + K+
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G ++ + ++ ++ A + SM V+ DS W ++G
Sbjct: 235 -GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR-DSVTWNIMIGG 280
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 296/507 (58%), Gaps = 5/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL--QIHARVLR 58
M+ YS + P E + LF M + N F + + C + Q+HA ++
Sbjct: 107 MISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIK 166
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
++L + ++L+D+Y+ E EA ++FD +P RD V++ ++S Y R +AL L
Sbjct: 167 KNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNL 226
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F L E C + VT ++L A + L ++++G+++H I M L NSLI MY
Sbjct: 227 FRQLYNEGMQC--NQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMY 284
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCG L + VF MPE+ VVSW+AM+ G +G + ++ F M V PD T
Sbjct: 285 SKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VKPDSVTLL 343
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL SH GLVDEG+ D + K+ L N HYGCV+DLLGR+G L++A LI M
Sbjct: 344 AVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPF 403
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P IW +LLGACR+H +V +GE V + L +++ + +G+YV+L N+Y++ W+ V L
Sbjct: 404 QPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRL 463
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M +K + PG S + L V+H F + HPR +I ++EI +K AG+V ++
Sbjct: 464 RKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDL 523
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ LH++ E+K L HSEKLAI FG+++TP TI+V KNLRICVDCHNFAK +S V
Sbjct: 524 SCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKV 583
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
Y RE+ +RD+ RFH EG C+C DYW
Sbjct: 584 YGREISLRDKNRFHLITEGACTCGDYW 610
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 143/282 (50%), Gaps = 18/282 (6%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
AI C+ +L G Q+HAR++ GY+ L T L+ +Y+ +A + D +P+R+
Sbjct: 41 AITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERN 100
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE-- 153
V+W +IS Y +N+R +A LF + R +GC+P++ T VL +C + +
Sbjct: 101 VVSWTAMISGYSQNERPAEAWDLFIMMLR--AGCEPNEFTLASVLTSCTGSQGIHQHQIK 158
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
++H + + + M + +SL+ MY++ ++ A VF +P +DVVS++ ++SG G
Sbjct: 159 QVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLG 218
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM----MFLDRMSKDFGILPN 269
+A+ F + G+ + TF+ +L+A S +D G + L R F L N
Sbjct: 219 LDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQN 278
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLL 309
++D+ + G L + ++ +M P+ ++ W +L
Sbjct: 279 -----SLIDMYSKCGKLLYSRRVFDNM---PERSVVSWNAML 312
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 290/506 (57%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M YS + E ++ +M + FA S A+K C L G +HA+V++
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + L+ LY+ E E K+FD++P+R+ +WN LIS +++ + +AL +F
Sbjct: 61 EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G VT +L CA + AL G++IH I + + + NSL+ MY K
Sbjct: 121 RMQREGMGFSW--VTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVK 178
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +F GM KD+ SW+ M++G A+NG+ R A++ F M G+ PDD TF +
Sbjct: 179 CGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIAL 238
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CSH GL ++G RM DFG+ P++ HY C+VD+LGRAG +D A ++ +M +K
Sbjct: 239 LSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKT 298
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+IW +LL +CR+H V L E + L EL+ G+YV+L N+Y++ G W+ V +RE
Sbjct: 299 SGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVRE 358
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY-QMLDEINKQLKIAGYVAEIT 419
M + ++ GCS I +K +H FV R ++ Y ++ +++ + ++ GY+
Sbjct: 359 MMQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTD 418
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E K + HSE+LA F ++ T G IR+ KNLR+CVDCH++ K++S V
Sbjct: 419 VVLHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVT 478
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF+EG CSCNDYW
Sbjct: 479 GRVIVLRDTNRFHHFKEGACSCNDYW 504
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/506 (37%), Positives = 298/506 (58%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + E LF +M Q+ + + A++ C + L ++H ++R G
Sbjct: 191 MIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG 250
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT-VAWNVLISCYIRNQRTRDALCLF 119
+ + L+ Y+ +++ A ++F+E+ + T ++WN +I + +N+ DA LF
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLF 310
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +PD T + V+ A A + IH Y H + + +LI MYS
Sbjct: 311 ARMQLEN--VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYS 368
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + +A +F ++ V++W+AMI G +G G+ A+E F M+ G P++ TF
Sbjct: 369 KCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLS 428
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+ACSH GLVDEG + M KD+G+ P + HYG +VDLLGRAG LD+A+ I +M ++
Sbjct: 429 VLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +++ +LGAC++HK+V L E + + EL +E +VLL N+Y++ W+ V +R
Sbjct: 489 PGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVR 548
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M +KGLQ TPG S I LK VH F +H +IY L ++ +++K GYV + T
Sbjct: 549 TAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPD-T 607
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
+H++ + K L+ HSEKLAIA+G++ T PGTTI++ KNLR+C DCHN K++S +
Sbjct: 608 DSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLT 667
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G+CSC DYW
Sbjct: 668 GREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 1/273 (0%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C L G +HA++ G +S T L ++Y + +A ++FD +P RD
Sbjct: 23 LKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDR 82
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
VAWN +++ Y RN A+ + EE G +PD VT + VL ACA AL ++H
Sbjct: 83 VAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVH 142
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G +N+ +++ Y KCG++ A VF MP ++ VSW+AMI G A NG+
Sbjct: 143 AFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNAT 202
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+A+ F M + GV D + L AC G +DE + + + G+ N+ +
Sbjct: 203 EAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVR-VGLSSNVSVTNAL 261
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + D A Q+ +G K W ++
Sbjct: 262 ITTYAKCKRADLAAQVFNELGNKKTRISWNAMI 294
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
T +L+ CA L G +H + G S+ +L MY KC A VF M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ--RAGVFPDDQTFTGVLSACS 245
P +D V+W+A+++G A NG A+E+ MQ G PD T VL AC+
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACA 130
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 300/536 (55%), Gaps = 32/536 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M Y E +F M + + + AI C + +++ G H VLR+G
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI----------------------------- 91
++ + L+D+Y + A ++FD +
Sbjct: 368 FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 92 --PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
P+++ V+WN +IS ++ +A+ +F ++ +E G D VT + + AC HLGAL
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE-GVNADGVTMMSIASACGHLGAL 486
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ + I+ YI ++G + L +L+ M+S+CG A +F + +DV +W+A I +
Sbjct: 487 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM G+ AIE F M G+ PD F G L+ACSH GLV +G M K G+ P
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HYGC+VDLLGRAGLL++A QLI M ++P+ IW +LL ACR+ +V + E +
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
L + +G YVLL N+Y+S G W + ++R M EKGL+ PG S+I ++G HEF D
Sbjct: 667 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 726
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP + I MLDE++++ G+V ++++ L ++ +EK LS HSEKLA+A+G+++
Sbjct: 727 ESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLIS 786
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ GTTIR+ KNLR+C DCH+FAK S VYNRE+I+RD RFH+ R+G+CSC D+W
Sbjct: 787 SNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 185/431 (42%), Gaps = 72/431 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ ++ LF +M R + + N I C K L G +++A +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +++ +++ L+D+Y A +LFDE + N + S Y+R TR+AL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +SG +PD ++ L + +C+ L + +G+ H Y+ +G+ S N+CN+LI MY
Sbjct: 326 NLM--MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 180 KC-------------------------------GSLGMAFEVFKGMPEKDVVSWSAMISG 208
KC G + A+E F+ MPEK++VSW+ +ISG
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 209 LAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +AIE F +MQ + GV D T + SAC H G +D + K+ GI
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQ 502
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSM------------------------------- 296
++ +VD+ R G + A + S+
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD--YVLLLNLYSSVGD 351
G+KPD + L AC V G+ + +++L D Y +++L G
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 352 WEKVKELREFM 362
E+ +L E M
Sbjct: 623 LEEAVQLIEDM 633
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 180/410 (43%), Gaps = 54/410 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ S E LF +M I + + F + C K + G+QIH +++ G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + +L+ Y+ + A K+FDE+ +R+ V+W +I Y R +DA+ LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+E P+ VT + V+ ACA L LE GEK++ +I G + ++L+ MY K
Sbjct: 225 RMVRDEE-VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C ++ +A +F ++ +AM S G R+A+ F M +GV PD +
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 241 LSACSH-----------------------------------CGLVDEGMMFLDRMSKDFG 265
+S+CS C D DRMS
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGER 323
+ N G V + G +D A++ +M P+ I W T++ +L E
Sbjct: 404 VTWNSIVAGYVEN-----GEVDAAWETFETM---PEKNIVSWNTIISGL---VQGSLFEE 452
Query: 324 VIEHLIELKAQE--SGDYVLLLNLYSS---VGDWEKVKELREFMNEKGLQ 368
IE +++QE + D V ++++ S+ +G + K + ++ + G+Q
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQI-HARVLRDGYQLDSQLMTTLM----DLYSTFEKSFE 83
N C+ A +K C + L++ H + + G D +T L+ +L + SF
Sbjct: 27 NQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF- 85
Query: 84 ACKLFDEIPQRDT-VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
A ++F+ T +N LI Y + +A+ LF L SG PD T L A
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF--LRMMNSGISPDKYTFPFGLSA 143
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA A G +IH I + GY + + NSL+ Y++CG L A +VF M E++VVSW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 203 SAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
++MI G A +DA++ F M R V P+ T V+SAC+ ++ G +
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI- 262
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
++ GI N +VD+ + +D A +L G
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P E L M + R + F + +K G Q+HA ++
Sbjct: 134 LITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYN 193
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + + L+D+Y+ ++ A ++FD + ++ V+WN LI+ + R L F
Sbjct: 194 LDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFA 253
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G T V A A +GALE G +H ++ + G + N+++ MY+K
Sbjct: 254 EMQR--NGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAK 311
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + ++D+V+W+ M++ A G G++A+ F +++ G+ + TF V
Sbjct: 312 SGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSV 371
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M KD+ + P I HY VDLLGRAGLL +A + M ++P
Sbjct: 372 LTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEP 430
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLGACR+HK+ +G+ +H+ EL +++G VLL N+Y+S G W+ +R+
Sbjct: 431 TAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRK 490
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV DD +HP+ EIY+M +E+N ++K AGYV
Sbjct: 491 MMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDY 550
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G TIR+ KN+RIC DCH+ + +S V+
Sbjct: 551 VLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFK 610
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 611 REIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 7/296 (2%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
I C + +L G IH+ + R D L+ +L+ +Y +A +FD IP RD
Sbjct: 69 ITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDV 128
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+W LI+ Y +N +AL L ++ R +P T L+A G GE++H
Sbjct: 129 VSWTYLITGYAQNDMPAEALGLLPDMLRAR--FRPSGFTFTSFLKAAGACGGRGIGEQMH 186
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
++ + + ++L+ MY++C + MA VF + K+ VSW+A+I+G A G G
Sbjct: 187 ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGE 246
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+ F MQR G T++ V SA + G +++G M K G +
Sbjct: 247 TTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKS-GQKLTAFVANTI 305
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+ + ++G + A ++ + + D W T+L A LG+ + H E++
Sbjct: 306 LGMYAKSGSMVDARKVFDRVDQR-DLVTWNTMLTA---FAQYGLGKEAVAHFEEIR 357
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 2/172 (1%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
++ ACA L IH ++S L NSLI MY KCG++ A VF G+P +D
Sbjct: 68 IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRD 127
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW+ +I+G A N +A+ M RA P TFT L A CG G +
Sbjct: 128 VVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQ-MH 186
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
++ + + +++ ++D+ R +D A ++ + K + + W L+
Sbjct: 187 ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVS-WNALIA 237
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 300/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + + E L +M+++ P + F S + C C+L +HA ++
Sbjct: 136 MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAA 195
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + T L+D+Y+ +A +F+ +P R V W+ + + Y++N+ AL LF
Sbjct: 196 MDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFR 255
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
E+G K D V+ ACA L A+ G++++ +S+ G+ S + + +SLI MY+K
Sbjct: 256 K--AWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAK 313
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +++VF+ + +++VV W+AMISGL+ + + + F MQ+ G+ P+D TF V
Sbjct: 314 CGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSV 373
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC H GLV +G + D M+K+ + PN+ HY C+VD L RAG + +AY LI+ +
Sbjct: 374 LSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++W +LL +CR H ++ L E + L +++ SG+Y+LL N+Y++ G W++V ++R+
Sbjct: 434 SASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRK 493
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ E ++ G S I +K VH F+V + +HP+I EIY L+E+ +L+ GY E
Sbjct: 494 LLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQH 553
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH +G K L +HSEKLA G+L PP IR+ KNLRIC DCH+F K+ S +
Sbjct: 554 DLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFC 613
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+VI+RD RFHHF+ G CSC D+W
Sbjct: 614 RDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 14/331 (4%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C K L+ G HA++L G + D L+++YS A ++FDE+P R
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+WN +I +N +AL L + RE G + T VL ACA AL + +H
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQRE--GTPFSEFTISSVLCACAAKCALSECQLLH 188
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ + + + +L+ +Y+KCG + A VF+ MP++ VV+WS+M +G N
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
A+ F G+ D + V+ AC+ + EG +SK G NI +
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKS-GFCSNIFVASSL 307
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQE 335
+D+ + G ++++Y++ + K + +W ++ H R +E +I K Q+
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHA------RSLEVMILFEKMQQ 360
Query: 336 SG---DYVLLLNLYSSVGDWEKVKELREFMN 363
G + V +++ S+ G VK+ +++ +
Sbjct: 361 MGLSPNDVTFVSVLSACGHMGLVKKGQKYFD 391
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ CA L G+ H I G + + N LI MYSKCGS+ A +VF MP +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-SHCGLVDEGMM-- 255
+VSW+ MI L NG +A++ MQR G + T + VL AC + C L + ++
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTL 308
F + + D N+ ++D+ + GL+ A + SM PD ++ W ++
Sbjct: 190 FAIKAAMDL----NVFVATALLDVYAKCGLMKDAVCVFESM---PDRSVVTWSSM 237
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 304/542 (56%), Gaps = 39/542 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +E F LFE+M+ + + + C + ++ I+ ++ +
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 61 YQLDSQLMTTLMDLY----------------------------STFEKSF---EACKLFD 89
++D+ L+T L+ +Y S + K+ +A +FD
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
+ +D V W +IS Y + ++AL +F+ + SG KPD VT L V+ AC +LG L
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCC--SGIKPDVVTMLSVISACVNLGTL 363
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ + +HRY +G S + + N+LI MY+KCG L A +VF+ MP ++VVSWS+MI+
Sbjct: 364 DKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAF 423
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G D++ F M++ V P++ TF GVL CSH GLV+EG M+ ++ I P
Sbjct: 424 AMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK 483
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HYGC+VDL GRA LL +A ++I SM + P+ IW +L+ ACR+H + LGE + ++
Sbjct: 484 IEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRIL 543
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
+L+ G VL+ N+Y+ W+ V+ +R M +K + G S I L G HEF++ D
Sbjct: 544 KLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGD 603
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H + NEIY L E+ +LK+AGYV + S L ++ EEK + + +HSEKLA+ FG++
Sbjct: 604 KRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMN 663
Query: 450 TPPGT------TIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
IR+ KNLR+C DCH F K++S VY E+I+RDR RFH +++G CSC D
Sbjct: 664 KEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRD 723
Query: 504 YW 505
YW
Sbjct: 724 YW 725
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 45/351 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-----KRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
++R S S P ++++R RI P +K K +L G+++H
Sbjct: 85 LLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPI-----LKAVSKVSALFEGMELHGF 139
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
+ D + T LMD+Y+ + A +FDE+ QRD V WN +I Y R +A
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
LF+ + ++S PD++ ++ AC G + + I+ ++ E+ +L +L+
Sbjct: 200 FKLFEEM--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALV 257
Query: 176 AMYSKCGSLGMAFEVFKGMP-------------------------------EKDVVSWSA 204
MY+ G + MA E F+ M KD+V W+
Sbjct: 258 TMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTT 317
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
MIS A + H ++A+ F M +G+ PD T V+SAC + G +D+ ++ R +
Sbjct: 318 MISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKA-KWVHRYTHLN 376
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
G+ + ++++ + G LD A + M + + W +++ A +H
Sbjct: 377 GLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMH 426
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 15/281 (5%)
Query: 27 PTNPFACSFA--IKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE 83
P FA S A I + FC + + Q+HA +LR + S+
Sbjct: 6 PRPSFAVSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSY 65
Query: 84 ACKLFDEI-PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
A LF I P +++ +N L+ R+ R + + + G + D ++ +L+A
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRI--RHVGGRFDRISFPPILKA 123
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
+ + AL G ++H + + S + L+ MY+ CG + A VF M ++DVV+W
Sbjct: 124 VSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTW 183
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI G +A + F M+ + V PD+ ++SAC G M +R
Sbjct: 184 NTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT-----GNMRYNRAIY 238
Query: 263 DFGILPNI----HHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
DF I ++ H +V + AG +D A + M V+
Sbjct: 239 DFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVR 279
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 297/511 (58%), Gaps = 26/511 (5%)
Query: 9 SSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S EE F L+ KM ++ + F +K C L G Q+H ++++ G+ D +
Sbjct: 110 SRKEEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYV 169
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
L+ Y + A K+FDE+P+R V+WN +I +R AL LF ++ +
Sbjct: 170 NNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQK--- 226
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH---GYGSKMNLCNSLIAMYSKCGSL 184
+PD T VL ACA LG+L G H ++ + + + NSLI MY KCGSL
Sbjct: 227 SFEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSL 286
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG--VFPDDQTFTGVLS 242
MA +VF+GM + D+ SW+AMI G A +G +A+ F M + G V P+ TF +L
Sbjct: 287 RMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLI 346
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
AC+H G+V++G + D M +++GI P + HYGC++DLL RAG + +A ++ SM +KPD+
Sbjct: 347 ACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDA 406
Query: 303 TIWRTLLGAC-RIHKHVTLGERVIEHLI-------ELKAQESGDYVLLLNLYSSVGDWEK 354
IWR+LL AC + V L E + ++I + SG YVLL +Y+S W
Sbjct: 407 VIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWND 466
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V +R+ M++ G++ PGCS+I + G+ +EF D SHP+ +IYQ L I+ +L+
Sbjct: 467 VGIVRKLMSDHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLR---S 523
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ + T++ K +L HSE+LAIAFG+++ PP T IR+ KNLR+C DCH K+
Sbjct: 524 IVDATND------SSKEYSLRLHSERLAIAFGLISLPPQTPIRIFKNLRVCSDCHEVTKL 577
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S V+N E+I+RDR+RFHHF++G CSC DYW
Sbjct: 578 ISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 608
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 136/275 (49%), Gaps = 14/275 (5%)
Query: 44 CSLMGGL-QIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
CS M L Q+HA LR Y + L ++ L S+F A ++FD I + W
Sbjct: 39 CSDMSQLKQLHAFTLRTTYPDEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMW 98
Query: 100 NVLI-SCYIRNQRTRDALCLFDN-LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
N LI +C R +A L+ L R ES PD T VL+ACA++ L G+++H
Sbjct: 99 NTLIRACAHDVSRKEEAFMLYRKMLERGESA--PDKHTFPFVLKACAYIFGLSEGKQVHC 156
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
I +HG+ + + N LI Y CG L +A +VF MPE+ +VSW++MI L G
Sbjct: 157 QIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDS 216
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM---MFLDRMSKDFGILPNIHHYG 274
A++ F MQ++ PD T VLSAC+ G + G +FL R + D + ++
Sbjct: 217 ALQLFRDMQKS-FEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLR-NCDVDVAMDVLIKN 274
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++++ + G L A Q+ M K D W ++
Sbjct: 275 SLIEMYCKCGSLRMAEQVFQGMR-KHDLASWNAMI 308
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 279/494 (56%), Gaps = 4/494 (0%)
Query: 14 GFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMD 73
+ F MR+ I N F A K S + G Q+HA ++ G D + + D
Sbjct: 92 ALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFD 151
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+YS + EA K+FDE+P+R+ WN +S + R DAL F +E G +P D
Sbjct: 152 MYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKE--GIEPTD 209
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
VL ACA L LE G+ +H + + + ++L+ MY KCGS+ A F
Sbjct: 210 FMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDE 269
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSACSHCGLVD 251
MPE+++V+W+AMI G A G A+ F M V P+ TF VLSACS G V+
Sbjct: 270 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVN 329
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
GM + M +GI P HY CVVDLLGRAG+++QAYQ I M ++P ++W LLGA
Sbjct: 330 VGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGA 389
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
++ LG+ ++L EL +SG++VLL N++++ G WE+ +R+ M + G++
Sbjct: 390 SKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGA 449
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS I VH F D SH R +EI ML ++ +++ AGY+ + + L +L EEK
Sbjct: 450 GCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKA 509
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ YHSEK+A+AFG+++ P G IR+ KNLRIC DCH+ K +SG+ RE+I+RD F
Sbjct: 510 MEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLF 569
Query: 492 HHFREGRCSCNDYW 505
H FR+ +CSC DYW
Sbjct: 570 HRFRDNQCSCRDYW 583
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 131/268 (48%), Gaps = 6/268 (2%)
Query: 44 CSLMGGLQIHARVLRD-GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVL 102
CS +G HA++++ L S + L+++YS ++ A L P R V W L
Sbjct: 21 CSRLG-RAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTAL 79
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
I+ ++N R AL F N+ R+ +P+D T +A L + G+++H +
Sbjct: 80 IAGSVQNGRFTSALFHFSNMRRDS--IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKA 137
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G S + + S MYSK G A ++F MPE+++ +W+A +S + G DA+ +F
Sbjct: 138 GQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAF 197
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
++ G+ P D + VLSAC+ +++ G + ++ ++ NI +VD+ G+
Sbjct: 198 IEARKEGIEPTDFMVSSVLSACAGLSVLEVGKS-VHTLAVKACVVGNIFVGSALVDMYGK 256
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLG 310
G ++ A + M + + W ++G
Sbjct: 257 CGSIEDAERAFDEMPER-NLVTWNAMIG 283
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 268/424 (63%), Gaps = 4/424 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++F E+P +D V+W+ +I + N +A F L R+ G +P++ + VL AC
Sbjct: 222 AREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRK--GMRPNETSLTGVLSAC 279
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSW 202
A GALEFG+ +H +I + G +++ N+L+ YSKCG++ MA VF + M E+++VSW
Sbjct: 280 AQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSW 339
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
++M++ LAM+GHG +AI F M+ +G+ PD+ F +L ACSH GLV++G + D+M
Sbjct: 340 TSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKG 399
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+ I P+I HYGC+VDL GRAG L +AY+ + M + + IWRTLLGAC +H V L E
Sbjct: 400 MYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAE 459
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
+V E L EL S D+VLL N Y+ G W+ +R M E+ + TPG S I + ++
Sbjct: 460 QVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIM 519
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKL 441
+ F+ + E Y+ L EI ++L++ GYV EI LH++ EEK ++S HSEKL
Sbjct: 520 YTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKL 579
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
A+AFG+ G TIR+ KNLRIC DCH K++S +Y E+++RDR RFH F++G CSC
Sbjct: 580 AVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSC 639
Query: 502 NDYW 505
DYW
Sbjct: 640 RDYW 643
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 171/400 (42%), Gaps = 88/400 (22%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R S P++ F +MR+ P + F+ +F +K S+ G+Q+H + L
Sbjct: 76 LIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVH 135
Query: 60 GYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
G LD+ L TTL+ +Y A K+FDE+P+ + +AWN +++
Sbjct: 136 G--LDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT------------- 180
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
AC G ++ G ++ + S N ++A
Sbjct: 181 ------------------------ACCRGGDMKGGRELFDLMPVRNLMS----WNVMLAG 212
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+K G L +A E+F MP KD VSWS MI G A NG+ +A F +QR G+ P++ +
Sbjct: 213 YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSL 272
Query: 238 TGVLSACSHCGLVDEGMM-------------------FLDRMSKDFGIL----------- 267
TGVLSAC+ G ++ G + LD SK +L
Sbjct: 273 TGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMN 332
Query: 268 -PNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGER 323
NI + ++ L G ++A + M G++PD + +LL AC H L E+
Sbjct: 333 ERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYAC---SHAGLVEQ 389
Query: 324 VIEHLIELKAQESGD-----YVLLLNLYSSVGDWEKVKEL 358
E+ ++K + + Y +++LY G +K E
Sbjct: 390 GCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEF 429
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 15/273 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS-TFEKSFE-ACKLFDEIPQRDTVAWNVL 102
SL QIHA VL+ G + D + L+ + + S + AC+LF P D N L
Sbjct: 17 SLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTL 76
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
I + R +D+L F + R S PD + +++A A+L ++ G ++H H
Sbjct: 77 IRGLYESDRPQDSLLKFIEMRR-NSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVH 135
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G + + + +LI+MY +CG +G A +VF MPE + ++W+AM++ G + E F
Sbjct: 136 GLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELF 195
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M + + G A L E MFL+ KD ++ +V
Sbjct: 196 DLMPVRNLMSWNVMLAGYTKA-GELELARE--MFLEMPMKD-----DVSWSTMIVG-FAH 246
Query: 283 AGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
G ++A+ + G++P+ T +L AC
Sbjct: 247 NGYFEEAFSFFRELQRKGMRPNETSLTGVLSAC 279
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 8/180 (4%)
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI--AMYSKCGSLGMAFEVFKG 193
CL +L C L + +IH + + G S + L+ S SL A +F+
Sbjct: 8 CLSLLNICKSLTTFK---QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRY 64
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-TFTGVLSACSHCGLVDE 252
P DV + +I GL + +D++ F M+R P D +F ++ A ++ V
Sbjct: 65 TPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRV 124
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G+ L + G+ ++ ++ + G G + A ++ M +P++ W ++ AC
Sbjct: 125 GIQ-LHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMP-EPNAIAWNAMVTAC 182
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 302/513 (58%), Gaps = 10/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + L+++M K + F + + L+GG Q H ++++ G
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 61 YQLDSQLMTTLMDLYST---FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDAL 116
+ +S + + L+D YS + ++ K+F EI D V WN +IS Y N+ + +A+
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAV 330
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLI 175
F + R G +PDD + + V AC++L + G++IH I + +++++ N+LI
Sbjct: 331 KSFRQMQR--IGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALI 388
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
++Y K G+L A VF MPE + VS++ MI G A +GHG +A+ + M +G+ P++
Sbjct: 389 SLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNI 448
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF +LSAC+HCG VDEG + + M + F I P HY C++DLLGRAG L++A + I +
Sbjct: 449 TFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA 508
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M KP S W LLGACR HK++ L ER + L+ ++ + YV+L N+Y+ G WE++
Sbjct: 509 MPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEM 568
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M K ++ PGCS I +K H FV +D SHP I E+ + L+E+ K++K GYV
Sbjct: 569 ASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Query: 416 AEITSELHNLGAEEKGNA---LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
+ + +G L +HSEKLA+AFG+++T G I V KNLRIC DCHN
Sbjct: 629 MDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAI 688
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V RE+I+RD LRFH F++G+CSC DYW
Sbjct: 689 KFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 177/406 (43%), Gaps = 45/406 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + LF++MR+ + F S I C L+ Q+H + G
Sbjct: 111 LISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIK--QLHCFAVSGG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
+ S + + YS EA +F + RD V+WN +I Y +++ AL L+
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G K D T VL A L L G + H + + G+ ++ + LI YS
Sbjct: 229 KEMIFK--GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS 286
Query: 180 KCG---SLGMAFEVFKGMPEKDVVSWSAMISGLAMN-GHGRDAIESFGAMQRAGVFPDDQ 235
KCG + + +VF+ + D+V W+ MISG +MN H +A++SF MQR G PDD
Sbjct: 287 KCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDC 346
Query: 236 TFTGVLSACSHC----------GLVDEGMMFLDRMSKD-------------------FGI 266
+F V SACS+ GL + + +R+S + F
Sbjct: 347 SFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDR 406
Query: 267 LPNIH--HYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
+P ++ + C++ + G +A YQ + G+ P++ + +L AC V G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG 466
Query: 322 ERVIEHLIE-LKAQ-ESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
++ + E K + E+ Y +++L G E+ + + M K
Sbjct: 467 QKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 16/248 (6%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
++ Y+ K A +LFDE PQ DTV++N LIS Y + T A+ LF + E G
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRM--RELG 135
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ D T ++ AC ++ +++H + G+ S ++ N+ + YSK G L A
Sbjct: 136 FEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 189 EVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VF GM +D VSW++MI + G A+ + M G D T VL+A +
Sbjct: 194 SVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL----GRAGLLD--QAYQLITSMGVKPD 301
+ G F ++ K G N H ++D GR G+ D + +Q I S PD
Sbjct: 254 DHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS----PD 308
Query: 302 STIWRTLL 309
+W T++
Sbjct: 309 LVLWNTMI 316
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N ++ Y+K + +A ++F P+ D VS++ +ISG A A+ F M+ G
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV----VDLLGRAGLLD 287
D T +G+++AC C VD L + F + Y V V + GLL
Sbjct: 138 VDGFTLSGLIAAC--CDRVD-----LIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+A + M D W +++ A HK
Sbjct: 191 EAVSVFYGMDGLRDEVSWNSMIVAYGQHK 219
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 298/507 (58%), Gaps = 8/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + EE LF +M++K + N F S + ++ ++HA+V++
Sbjct: 372 MISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTN 427
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ S + T L+D Y K EA K+F I +D VAW+ +++ Y + T A+ +F
Sbjct: 428 YERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFS 487
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L + G KP++ T +L CA A + G++ H + + S + + ++L+ MY+
Sbjct: 488 ELTK--GGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 545
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + A EVFK EKD+VSW++MISG A +G A++ F M++ V D TF G
Sbjct: 546 KKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIG 605
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
V +AC+H GLV+EG + D M +D I P H C+VDL RAG L++A ++I +M
Sbjct: 606 VFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNL 665
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
STIWRT+L ACR+HK LG E +I + ++S YVLL N+Y+ GDW++ ++R
Sbjct: 666 AGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVR 725
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ MNE+ ++ PG S I +K + F+ D SHP ++IY L++++ +LK GY + +
Sbjct: 726 KLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTS 785
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ E K L+ HSE+LAIAFG++ATP G+ + + KNLR+C DCH K+++ +
Sbjct: 786 YVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIE 845
Query: 480 NREVIIRDRLRFHHF-REGRCSCNDYW 505
RE+++RD RFHHF +G CSC D+W
Sbjct: 846 EREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 36/344 (10%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
+S +E LF ++ + + S +K C + G Q+H + ++ G+ D
Sbjct: 72 FSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 131
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T+L+D Y + +FDE+ +R+ V W LIS Y RN + L LF +
Sbjct: 132 VSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLF--MRM 189
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
++ G +P+ T L A G G ++H + ++G + + NSLI +Y KCG++
Sbjct: 190 QDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 249
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A +F K VV+W++MISG A NG +A+ F +M+ V + +F ++ C
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLC 309
Query: 245 S-----------HCGLVDEGMMF------------------LD--RMSKDFGILPNIHHY 273
+ HC +V G +F LD R+ K+ G L N+ +
Sbjct: 310 ANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSW 369
Query: 274 GCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRI 314
++ + ++A L + M GV+P+ + +L A +
Sbjct: 370 TAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPV 413
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E +F MR + + + + IK C L Q+H V++ G
Sbjct: 270 MISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYG 329
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + T LM YS +A +LF E + V+W +IS +++N +A+ LF
Sbjct: 330 FVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLF 389
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R+ G +P++ T ++L A + E +H + + Y + +L+ Y
Sbjct: 390 SEMKRK--GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYV 443
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G + A +VF G+ KD+V+WSAM++G A G AI+ F + + GV P++ TF+
Sbjct: 444 KLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSS 503
Query: 240 VLSACS 245
+L+ C+
Sbjct: 504 ILNVCA 509
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 20/290 (6%)
Query: 21 MRQKRIPTNPFAC-SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFE 79
MR R P + +F +K C+ + + +G L+ + R+ G S+L
Sbjct: 1 MRFTRTVWRPQSLENFKLKFCI-YANELGNLKPNFRIYCFGAASSSRL------------ 47
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
+ A LFD+ P RD ++ L+ + R+ RT++A LF LN + G + D V
Sbjct: 48 --YYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLF--LNIQHLGMEMDCSIFSSV 103
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L+ A L FG ++H + G+ +++ SL+ Y K + VF M E++V
Sbjct: 104 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNV 163
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
V+W+ +ISG A N + + F MQ G P+ TF L + G+ G+
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 223
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ K+ G+ I +++L + G + +A L VK T W +++
Sbjct: 224 VVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMI 271
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/503 (37%), Positives = 289/503 (57%), Gaps = 3/503 (0%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
YS + P+E L+ +M + FA S A+K C L G +HA+VL+
Sbjct: 152 GYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDP 211
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D + L+ LYS EA ++FD +P R+ V+WN LI+ ++ +A+ F +
Sbjct: 212 DQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIM- 270
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ G VT +L CA + AL G++IH I + + NSL+ MY+KCG+
Sbjct: 271 -QGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGA 329
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ VF GM KD+ SW+ +I+G A+NG +A+ESF M +G PD TF +LS
Sbjct: 330 MDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSG 389
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GL D+G + M D+GI P + HY C+VD+LGRAG + +A +++ +M KP +
Sbjct: 390 CSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGS 449
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IW +LL +CR+H +V L E V + L EL+ +G+YV+L N+Y++ G WE VK +REFM
Sbjct: 450 IWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFME 509
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRIN-EIYQMLDEINKQLKIAGYVAEITSEL 422
++G+ GCS + +K +H FV + R + E ++ + + ++ GYV + L
Sbjct: 510 KRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVL 569
Query: 423 HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNRE 482
H++ E + + HSE+LA F ++ T G IR+ KNLR+CVDCH++ K LS V R
Sbjct: 570 HDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRV 629
Query: 483 VIIRDRLRFHHFREGRCSCNDYW 505
+++RD RFHHF++G CSC DYW
Sbjct: 630 IVLRDTNRFHHFKDGVCSCKDYW 652
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 293/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +Y+ + ++ LF++M + I + FA + A+ SL G +H +R+G
Sbjct: 157 MITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNG 216
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LM++Y EA +FD + ++DT++WN LI Y R+ +A LF+
Sbjct: 217 IEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFN 276
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +P+ VT +L A A L +LE G ++H Y GY + N+L+ MY K
Sbjct: 277 EMLLQ---LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVK 333
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L +A +F + K+++SW+ MI+G M+G GRDAI F M+ +G+ PD +F+ +
Sbjct: 334 CGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAI 393
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL DEG F + M + I P + HY C+VDLL G L +AY+ I +M ++P
Sbjct: 394 LYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEP 453
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS+IW +LL CRIH++V L E+V E + EL+ + +G YVLL N+Y+ WE V++L+
Sbjct: 454 DSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKN 513
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ +GL+ GCS I ++G H F ++ +HP+ I + LD++ ++++ G+ +
Sbjct: 514 KVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKY 573
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L AL HS KLA+AFGVL G IRV KN R+C CH AK +S +
Sbjct: 574 ALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCG 633
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF EGRCSC YW
Sbjct: 634 REIILRDSNRFHHFEEGRCSCRGYW 658
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 47 MGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
M GL +H +++ G+ + L+ Y+ + +A +FDE+PQRD ++WN +I
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
N A+ LF + E G + D T L V+ AC G +H Y G S
Sbjct: 61 ASNGLYDKAVELFVRMWLE--GQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLIS 118
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ +L N+L+ MYS C ++F+ M +K+VVSW+AMI+ GH F M
Sbjct: 119 ETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMG 178
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
G+ PD T L A + + G ++ GI + ++++ + G +
Sbjct: 179 LEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRN-GIEEVLPVANALMEMYVKCGYM 237
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGA 311
++A + I K D+ W TL+G
Sbjct: 238 EEA-RFIFDHVTKKDTISWNTLIGG 261
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 46/293 (15%)
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G +H Y+ ++G+G++ +CN+LI+ Y+K + A VF MP++D++SW+++I G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--SH--------------CGLVDE--- 252
NG A+E F M G D T V+ AC SH GL+ E
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 253 GMMFLDRMS---------KDFGIL--PNIHHYGCVVDLLGRAGLLDQAYQLITSM---GV 298
G LD S K F + N+ + ++ RAG D+ L M G+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV-LLLNLYSSVGDWEKVKE 357
+PD + L A ++ + G+ V + I +E L+ +Y G E+ +
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
+ + + +K TI ++ + +++ NE + + +E+ QL+
Sbjct: 243 IFDHVTKK--------DTISWNTLIGGYSRSNLA----NEAFTLFNEMLLQLR 283
>gi|242062828|ref|XP_002452703.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
gi|241932534|gb|EES05679.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
Length = 622
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 286/497 (57%), Gaps = 4/497 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P L+ M + + + + F +K C + SL G Q+ A + + G Q D + +
Sbjct: 128 PAAALRLYVDMLEAGVGPDSYTFPFVLKACAQLASLQQGRQLQAHIEKLGLQHDEHVQNS 187
Query: 71 LMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+ Y + A FD + +R T +W+ L++ Y + + L F + + G
Sbjct: 188 LISFYGKCGEPAMARLAFDRVEDEERTTASWSALLAAYTKAGLWGECLESFGAMVLD--G 245
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD+ + + + ACAHLGA + G IH + + + SL+ MY+KCGS+ A
Sbjct: 246 WRPDESSMVSAISACAHLGAFDVGRSIHCALLRNTARLNTIMQTSLVDMYAKCGSIEKAA 305
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF M +K+ ++SAM+SGLA++G GR A++ F AM R G PD + GVL+ACS G
Sbjct: 306 AVFDAMDDKNAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAPDAAAYVGVLNACSRAG 365
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
L+++G+ DRM + PN HYGC+VDL+ RAG LD A LI SM P T WR+L
Sbjct: 366 LLEDGLRCFDRMRLEHKFAPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTDTAWRSL 425
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACRIH + L E +E L L A +GDYV++ ++++ +W R + GL
Sbjct: 426 LNACRIHGDLDLAESALEELRSLGAANAGDYVIVADMHARAKNWAAAAAFRTEAVDWGLA 485
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
+PG S + ++G +H FV D+SHPR +IY+ML ++ QL+ GY + + ++G E
Sbjct: 486 QSPGFSAVEVRGELHRFVSQDMSHPRTRDIYEMLHQMEWQLRFDGYRPDTSEVALDVGEE 545
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EK + ++ HS+KLA+AFG+L+TP G +RV NLR+ +CH ++ ++S ++ RE++IRDR
Sbjct: 546 EKRHVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGREIVIRDR 605
Query: 489 LRFHHFREGRCSCNDYW 505
R H FR G C+C DYW
Sbjct: 606 NRLHRFRRGACTCRDYW 622
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 277/442 (62%), Gaps = 8/442 (1%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
++ +D+Y+ A K+F+ IP +D ++WN LI+ Y +N +A+ ++ +
Sbjct: 222 ILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE-- 279
Query: 127 SGCK---PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
CK P+ T + +L A AH+GAL+ G KIH + + + + LI +Y KCG
Sbjct: 280 --CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGR 337
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A +F +P++ V+W+A+IS ++GH ++ FG M GV PD TF +LSA
Sbjct: 338 LVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 397
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH G V+EG R+ +++GI P++ HYGC+VDLLGRAG L+ AY I M ++PD++
Sbjct: 398 CSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDAS 456
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IW LLGACRIH ++ LG+ + L E+ ++ G YVLL N+Y++VG WE V ++R
Sbjct: 457 IWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLAR 516
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
E+GL+ TPG STI + V F + SHP+ EIY+ L + ++K GY+ + + L
Sbjct: 517 ERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQ 576
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ +EK + L+ HSE+LAIAFG+++TPP + IR+ KNLR+C DCHN K +S + RE+
Sbjct: 577 DVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREI 636
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFHHF++G CSC DYW
Sbjct: 637 VVRDSNRFHHFKDGICSCGDYW 658
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 155/339 (45%), Gaps = 38/339 (11%)
Query: 35 FAIKCCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
+ +K C +L+ G +IH + G+Q + + +L+ +YS F + A LFD++P
Sbjct: 119 YTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPF 178
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
RD +WN +IS I+N AL + D + E G K + VT + +L
Sbjct: 179 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLE--GIKMNFVTVVSILPV----------- 225
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+ MY+K G L A +VF+ +P KDV+SW+ +I+G A NG
Sbjct: 226 --------------------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNG 265
Query: 214 HGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
+AIE + M+ + P+ T+ +L A +H G + +GM R+ K + ++
Sbjct: 266 LASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT-NLHLDVFV 324
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI-EHLIEL 331
C++D+ G+ G L A L + + S W ++ IH H ++ E L E
Sbjct: 325 ATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG 383
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
+ +V LL+ S G E+ K M E G++ +
Sbjct: 384 VKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 422
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+HA ++ G + T L++LY+ + S C FD+IPQ+D AWN +IS Y+ N
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCT-FDQIPQKDVYAWNSMISAYVHNG 96
Query: 111 RTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+A+ C + L E +PD T VL+AC G L G KIH + + G+ +
Sbjct: 97 HFHEAIGCFYQLLLVSE--IRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 151
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ SLI MYS+ G G+A +F MP +D+ SW+AMISGL NG+ A++ M+ G
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ F V+S ILP VD+ + GLLD A
Sbjct: 212 I---KMNFVTVVS-----------------------ILP------VFVDMYAKLGLLDSA 239
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA--QESGDYVLLLNLYS 347
+++ + VK D W TL+ + + V + + E K G +V +L Y+
Sbjct: 240 HKVFEIIPVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 298
Query: 348 SVG 350
VG
Sbjct: 299 HVG 301
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ Y+ + E +++ M + K I N + +L G++IH RV++
Sbjct: 257 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT 316
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
LD + T L+D+Y + +A LF ++PQ +V WN +ISC+ + L LF
Sbjct: 317 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLF 376
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G KPD VT + +L AC+H G +E G+ R + E+G + ++ +
Sbjct: 377 GEMLDE--GVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLG 434
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ G L MA++ K MP + D W A++ ++G+
Sbjct: 435 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 120/287 (41%), Gaps = 20/287 (6%)
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
F + +H + G + + L+ +Y+ G + ++ F +P+KDV +W++MIS
Sbjct: 34 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93
Query: 211 MNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
NGH +AI F + + PD TF VL AC LVD + + G N
Sbjct: 94 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG--TLVDGRKIHC--WAFKLGFQWN 149
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL- 328
+ ++ + R G A L M + D W ++ + + V++ +
Sbjct: 150 VFVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVLDEMR 208
Query: 329 ---IELKAQESGDYV-LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
I++ + + +++Y+ +G + ++ E + P I ++
Sbjct: 209 LEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEII--------PVKDVISWNTLITG 260
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
+ + ++ I E+Y+M++E + + G I ++GA ++G
Sbjct: 261 YAQNGLASEAI-EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 306
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 300/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + + E L +M+++ P + F S + C C+L +HA ++
Sbjct: 136 MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAA 195
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + T L+D+Y+ +A +F+ +P R V W+ + + Y++N+ AL LF
Sbjct: 196 MDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFR 255
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
E+G K D V+ ACA L A+ G++++ +S+ G+ S + + +SLI MY+K
Sbjct: 256 K--AWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAK 313
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +++VF+ + +++VV W+AMISGL+ + + + F MQ+ G+ P+D TF V
Sbjct: 314 CGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSV 373
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSAC H GLV +G + D M+K+ + PN+ HY C+VD L RAG + +AY LI+ +
Sbjct: 374 LSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++W +LL +CR H ++ L E + L +++ SG+Y+LL N+Y++ G W++V ++R+
Sbjct: 434 SASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRK 493
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ E ++ G S I +K VH F+V + +HP+I EIY L+E+ +L+ GY E
Sbjct: 494 LLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQH 553
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH +G K L +HSEKLA G+L PP IR+ KNLRIC DCH+F K+ S +
Sbjct: 554 DLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFC 613
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+VI+RD RFHHF+ G CSC D+W
Sbjct: 614 RDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 4/279 (1%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+K C K L+ G HA++L G + D L+++YS A ++FDE+P R
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+WN +I +N +AL L + RE G + T VL ACA AL + +H
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQRE--GTPFSEFTISSVLCACAAKCALSECQLLH 188
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ + + + +L+ +Y+KCG + A VF+ MP++ VV+WS+M +G N
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
A+ F G+ D + V+ AC+ + EG +SK G NI +
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKS-GFCSNIFVASSL 307
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+D+ + G ++++Y++ + K + +W ++ H
Sbjct: 308 IDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRH 345
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ CA L G+ H I G + + N LI MYSKCGS+ A +VF MP +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-SHCGLVDEGMM-- 255
+VSW+ MI L NG +A++ MQR G + T + VL AC + C L + ++
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTL 308
F + + D N+ ++D+ + GL+ A + SM PD ++ W ++
Sbjct: 190 FAIKAAMDL----NVFVATALLDVYAKCGLMKDAVCVFESM---PDRSVVTWSSM 237
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 287/506 (56%), Gaps = 34/506 (6%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS----------TF 78
+P ++ C L + HARV+ G+ L+ +L+ Y+ F
Sbjct: 69 DPTVLHRVLERCRVSTDLKTATKTHARVVVLGFATYPSLVASLISTYAQCHRPHIALHVF 128
Query: 79 EKSFE-------------------ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + A K+F ++ RD V WN +I Y+RN R DAL +F
Sbjct: 129 SRILDLFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIF 188
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +PD T V+ ACA LGAL + +H + E L +LI MY+
Sbjct: 189 RRM--LSAKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVELNYILSAALIDMYA 246
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + ++ +VF+ + V W+AMISGLA++G DA F M+ V PD TF G
Sbjct: 247 KCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIG 306
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L+ACSHCGLV+EG + M F I P + HYG +VDLLGRAGL+++AY +I M ++
Sbjct: 307 ILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRME 366
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IWR LL ACRIH+ LGE I ++ L ESGD+VLL N+Y S+ +W+ + +R
Sbjct: 367 PDIVIWRALLSACRIHRKKELGEVAIANISRL---ESGDFVLLSNMYCSLNNWDGAERVR 423
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M +G++ + G S + L +H+F SHP + IY++L+ + ++ K+ G+
Sbjct: 424 RMMKTRGVRKSRGKSWVELGDGIHQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGFTPLTD 483
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ EEK L +HSEKLA+A+ VL T PGT IR++KNLRIC+DCHN+ K++S +
Sbjct: 484 LVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHNWIKIVSKIL 543
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
NR++I+RDR+RFH F G CSC DYW
Sbjct: 544 NRKIIVRDRIRFHQFEGGVCSCKDYW 569
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ +F +M ++ + F + + C + +L +H ++ +L+ L L+
Sbjct: 183 DALSIFRRMLSAKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVELNYILSAALI 242
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ + + ++F+E+ + WN +IS + DA +F + E PD
Sbjct: 243 DMYAKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEH--VLPD 300
Query: 133 DVTCLLVLQACAHLGALE-----FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+T + +L AC+H G +E FG +R++ + ++ +++ + + G + A
Sbjct: 301 SITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQ----PQLEHYGTMVDLLGRAGLMEEA 356
Query: 188 FEVFKGMP-EKDVVSWSAMISG 208
+ V K M E D+V W A++S
Sbjct: 357 YAVIKEMRMEPDIVIWRALLSA 378
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/495 (39%), Positives = 289/495 (58%), Gaps = 24/495 (4%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+EG F +M ++++ N I C +L G HA +LR+G+ + L+T L
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTAL 333
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF-DNLNREESGCK 130
+D+Y + A LF+ + ++D W+VLIS Y LF + LN + K
Sbjct: 334 IDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNND---VK 390
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P++VT + +L CA GAL+ G+ H YI+ HG + L +LI MY+KCG + +A +
Sbjct: 391 PNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSL 450
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F ++D+ W+ M++G +M+G G++A+E F M+ GV P+D TF + ACSH GL+
Sbjct: 451 FNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLM 510
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ HYGC+VDLLGRAG LD+A+ +I +M ++P++ IW LL
Sbjct: 511 E--------------------HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLA 550
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC++HK++ LGE ++EL Q G VL N+Y+S W V +RE M+ G++
Sbjct: 551 ACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKE 610
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
PG S I + G VH F D + + ++Y+M+ E+ +L+ +GY + L N+ EEK
Sbjct: 611 PGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEK 670
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+ALSYHSEKLA AFG+++T PGT IR+ KNLRIC DCH K+LS +Y R +I+RDR R
Sbjct: 671 ESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNR 730
Query: 491 FHHFREGRCSCNDYW 505
FHHF EG CSC YW
Sbjct: 731 FHHFSEGYCSCMGYW 745
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 178/377 (47%), Gaps = 16/377 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ +Y+ + P+ F + MR + F +K C + S G ++H ++
Sbjct: 58 LISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKN 117
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ D + LM++Y A +FD++P+RD V+W ++ CY+R++ +AL L
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM--NLCNSLIAM 177
+ + G K V + ++ +L ++ G +H YI + KM ++ +LI M
Sbjct: 178 REM--QFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDM 235
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y K G L A +F + ++ VVSW+ MI+G + + ++F M +FP++ T
Sbjct: 236 YCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKD-FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+++ C G +D G F + ++ FG+ ++ ++D+ G+ G + A L +
Sbjct: 296 LSLITECGFVGTLDLGKWFHAYLLRNGFGM--SLALVTALIDMYGKCGQVGYARALFNGV 353
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE----SGDYVLLLNLYSSVGDW 352
K D IW L+ A + HV+ ++V +E+ + + V LL+L + G
Sbjct: 354 K-KKDVKIWSVLISA---YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGAL 409
Query: 353 EKVKELREFMNEKGLQT 369
+ K ++N GL+
Sbjct: 410 DLGKWTHAYINRHGLEV 426
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
+N+LIS Y N + + + ++ R D+ +L+ACA + + G ++H +
Sbjct: 55 YNLLISSYTNNHLPQASFNCYLHM-RSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
++G+ S + +CN+L+ MY KCG L A VF MPE+DVVSW+ M+ + +A
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 219 IESFGAMQRAGV 230
+ MQ GV
Sbjct: 174 LRLVREMQFVGV 185
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 289/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ + + +E F +M+ + + + + + C ++ G QIHA ++R
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q + + L+D+Y + A +FD + Q++ V+W ++ Y + R +A+ +F
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF- 359
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L+ + SG PD T + ACA++ +LE G + H G + + NSL+ +Y K
Sbjct: 360 -LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + + +F M +D VSW+AM+S A G + I+ F M + G+ PD T TGV
Sbjct: 419 CGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SACS GLV++G + M+ ++GI+P+I HY C++DL R+G L++A + I M P
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 538
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL ACR ++ +G+ E LIEL Y LL ++Y+S G W+ V +LR
Sbjct: 539 DAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M EK ++ PG S I KG +H F DD S P +++IY L+E+N ++ GY + +
Sbjct: 599 GMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSF 658
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H++ K L+YHSE+LAIAFG++ P G IRV KNLR+CVDCHN K +S V
Sbjct: 659 VHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTG 718
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD +RFH F++G CSC D+W
Sbjct: 719 REILVRDAVRFHRFKDGTCSCGDFW 743
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 42/315 (13%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G QIH +V++ G++ + + L+ +Y+ +A K+F + R+TV +N L+ +
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 109 NQRTRDALCLFDNLNRE------------ESGCKPDDVTCLL----------------VL 140
DAL LF + ++ ++G + + C VL
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
AC LGA+ G++IH I + + + ++LI MY KC L A VF M +K+VV
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW+AM+ G G +A++ F MQR+G+ PD T +SAC++ ++EG F +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK- 396
Query: 261 SKDFGILPNIHHYGCV----VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC---- 312
I + HY V V L G+ G +D + +L M V+ D+ W ++ A
Sbjct: 397 ----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFG 451
Query: 313 RIHKHVTLGERVIEH 327
R + + L +++++H
Sbjct: 452 RAVETIQLFDKMVQH 466
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 64/264 (24%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR----------------- 94
IH ++R ++ L ++ Y+ + S A ++FD IPQ
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 95 --------------DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
D V WNVLI Y + A+ ++ + R+ S VT + +L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS-ANLTRVTLMTML 146
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK-------------------- 180
+ + G + G++IH + + G+ S + + + L+ MY+
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 181 -----------CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
CG + A ++F+GM EKD VSW+AMI GLA NG ++AIE F M+ G
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 230 VFPDDQTFTGVLSACSHCGLVDEG 253
+ D F VL AC G ++EG
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEG 289
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 122/263 (46%), Gaps = 7/263 (2%)
Query: 30 PFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFD 89
P+ +F + +LM RV Q + L+ YS E F+
Sbjct: 37 PYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFE 96
Query: 90 EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++P RD V WNVLI Y + A+ ++ + R+ S VT + +L+ + G +
Sbjct: 97 KLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS-ANLTRVTLMTMLKLSSSNGHV 155
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
G++IH + + G+ S + + + L+ MY+ G + A +VF G+ +++ V +++++ GL
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
G DA++ F M++ D ++ ++ + GL E + M K G+ +
Sbjct: 216 LACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMD 269
Query: 270 IHHYGCVVDLLGRAGLLDQAYQL 292
+ +G V+ G G +++ Q+
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQI 292
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 290/506 (57%), Gaps = 10/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV S + + EE +F M + A S+ CS G + + R+
Sbjct: 114 MVSGLSKNGASEEAAAMFRIMPVRN------AVSWNAMVAALACS--GDMGAAEDLFRNA 165
Query: 61 YQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D+ L T ++ Y +A + F +P R+ V+WN +++ Y++N R DAL +F
Sbjct: 166 PEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVF 225
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E+S +P+ T VL C++L AL FG ++H++ + + + SL++MY
Sbjct: 226 KTM-VEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYC 284
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG L A +VF M KD+V+W+AMISG A +G G AI+ F M+ GV PD T
Sbjct: 285 KCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLA 344
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+AC H GL D G+ + M + + I P I HY C+VDLL RAGLL++A +I SM +
Sbjct: 345 VLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFE 404
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P + + TLL ACR++K++ E LIE Q +G YV L N+Y+ W V +R
Sbjct: 405 PHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVR 464
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+M + + TPG S + +KGV HEF +D HP++ I+ LD + +K GYV ++
Sbjct: 465 RWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLD 524
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ K L HSEKLAIAFG+++T PG T+R+ KNLRIC DCHN AK++S +
Sbjct: 525 FALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIE 584
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD RFHHFR G CSC DYW
Sbjct: 585 DREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL-LVLQ 141
+A +LFD IP DTV++N L+SC+ A D R S DVT ++
Sbjct: 64 DARRLFDSIPHPDTVSYNTLLSCHF-------ACGDIDGARRVFSTMPVKDVTSWNTMVS 116
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK-DVV 200
+ GA E + R + S N+++A + G +G A ++F+ PEK D +
Sbjct: 117 GLSKNGASEEAAAMFRIMPVRNAVS----WNAMVAALACSGDMGAAEDLFRNAPEKTDAI 172
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
W+AM+SG G+ + A+E FGAM + ++ V++ D+ + M
Sbjct: 173 LWTAMVSGYMDTGNVQKAMEFFGAMPVRNLV----SWNAVVAGYVKNSRADDALRVFKTM 228
Query: 261 SKDFGILPNIHHYGCVV---DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+D + PN V+ L G Q +Q + + + T+ +LL
Sbjct: 229 VEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLL 280
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 204/550 (37%), Positives = 300/550 (54%), Gaps = 45/550 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC---------------MKFC- 44
MV YS ++ LFEK+R+++I N S I M+ C
Sbjct: 303 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCG 362
Query: 45 -------------------SLMGGLQIHARVLRDGYQLDSQ-------LMTTLMDLYSTF 78
+L+ G + H ++ LD ++ L+D+YS
Sbjct: 363 SEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC 422
Query: 79 EKSFEACKLFDEIPQRD--TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ A +FD IP +D V W VLI ++ +AL LF + + ++ P+ T
Sbjct: 423 KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 482
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKM-NLCNSLIAMYSKCGSLGMAFEVFKGMP 195
L ACA LGAL FG +IH Y+ + + S M + N LI MYSK G + A VF M
Sbjct: 483 SCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH 542
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+++ VSW+++++G M+G G +A++ F MQ+ G+ PD TF VL ACSH G+VD+G+
Sbjct: 543 QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGIN 602
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + M+KDFG++P HY C+VDLL RAG LD+A +LI M +KP +W LL ACR++
Sbjct: 603 YFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVY 662
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+V LGE L+EL++ G Y LL N+Y++ W+ V +R M G++ PGCS
Sbjct: 663 ANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSW 722
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
+ + F D SHP +IY +L ++ +++K GYV + LH++ EEKG+ LS
Sbjct: 723 VQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLS 782
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLA+A+G+L T PG IR+ KNLR C DCH+ +S + E+I+RD RFHHF+
Sbjct: 783 EHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFK 842
Query: 496 EGRCSCNDYW 505
G CSC YW
Sbjct: 843 NGSCSCRGYW 852
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 140/262 (53%), Gaps = 5/262 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ L+ +M++ + + F +K C + S G +HA V G++ + + L
Sbjct: 108 EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGL 167
Query: 72 MDLYSTFEKSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
+ +Y A ++FDE+ +R D V+WN +++ Y++ + A+ +F+ + E+ G
Sbjct: 168 VSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMT-EDLG 226
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD V+ + VL ACA +GA G+++H Y G + + N+++ MY+KCG + A
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 286
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+VF+ M KDVVSW+AM++G + G DA+ F ++ + + T++ V++ + G
Sbjct: 287 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
Query: 249 LVDEGMMFLDRMSKDFGILPNI 270
L E + +M + G PN+
Sbjct: 347 LGFEALDVFRQM-RLCGSEPNV 367
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 174 LIAMYSKCGSLGMAFEVFKGM--PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+I+MY S A V + + V W+ +I G D ++ + MQR G
Sbjct: 64 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 123
Query: 232 PDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
PD TF VL AC CG ++F G N+ +V + GR G
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFAS------GFEWNVFVGNGLVSMYGRCGAW 177
Query: 287 DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
+ A Q+ M GV D W +++ A ++ E + E D V L+
Sbjct: 178 ENARQVFDEMRERGVG-DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP-DAVSLV 235
Query: 344 NLY---SSVGDWEKVKELREFMNEKGL 367
N+ +SVG W + K++ + GL
Sbjct: 236 NVLPACASVGAWSRGKQVHGYALRSGL 262
>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 291/507 (57%), Gaps = 19/507 (3%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P F LF +MR + + + + + L Q+HA R G ++ +
Sbjct: 141 PVASFALFRRMRAAAVGFD----AVTLLALVPATPLSVVPQVHALAARVGLATETSVANC 196
Query: 71 LMDLYS---TFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
LM Y+ F + A ++FDE+P RD V+WN ++S + +N DAL L+ +
Sbjct: 197 LMSTYARGGAFGAAL-ARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALELYRRMRSP 255
Query: 126 E-SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMYSKCG 182
E SG +PD VT + VL + AHLGA G + Y+ + G+ + + LCN+LI +++CG
Sbjct: 256 EGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQRIPGFHTNVQLCNALINFHARCG 315
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
SL A ++F MP K +VSW+A+I+G M+G+G A+ F M G+ PD+ + S
Sbjct: 316 SLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLFERMVSEGIRPDNVAMVALFS 375
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
ACSH GL DEG + M + + P + HY C+VDLLGRAG L++A +LI+SM + D
Sbjct: 376 ACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMPMPADG 435
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFM 362
+W LLGAC+IHK+V +GE +IEL+ + G YVL+ N+Y+ G + V +R M
Sbjct: 436 AVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTGQLDCVARVRAMM 495
Query: 363 NEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSEL 422
E+GL+ PGCS + KG VH F+ DD SHP+ IY+++ + +K + E SE+
Sbjct: 496 RERGLKKEPGCSYVEHKGRVHLFMADDHSHPQARRIYELVIRLELMVKEKSGMRE--SEV 553
Query: 423 HNL-GAEEKGNA---LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
G EK A + HSEKLA+AFG+L T G+ I V KNLR+C DCH+F KV+S
Sbjct: 554 AAAKGRMEKAAAQPLVGIHSEKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLKVVSAT 613
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
NR ++RD RFH F G CSC DYW
Sbjct: 614 TNRAFLVRDASRFHRFDGGVCSCKDYW 640
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 292/506 (57%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +YS + E + F +M+ F + + SL G Q+H + L
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+D+Y+ E EA +F +PQR TV+W LIS Y++ L LF
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ S + D T VL+A A +L G+++H +I G + + L+ MY+K
Sbjct: 442 KM--RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +VF+ MP+++ VSW+A+IS A NG G AI +F M +G+ PD + GV
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSHCG V++G + MS +GI P HY C++DLLGR G +A +L+ M +P
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +W ++L ACRIHK+ +L ER E L + K +++ YV + N+Y++ G+WEKV++++
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E+G++ P S + + +H F +D +HP +EI + ++E+ +++ GY + +
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S + ++ + K +L YHSE+LA+AF +++TP G I V KNLR C DCH K++S +
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHF EG CSC DYW
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 8/313 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y E +LF KMRQ + F S +K + G Q+HA + G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + ++D YS ++ E LFDE+P+ D V++NV+IS Y + + +L F
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G + +L A+L +L+ G ++H S +++ NSL+ MY+K
Sbjct: 341 EM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C A +FK +P++ VSW+A+ISG G ++ F M+ + + D TF V
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATV 458
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L A + + G + + G L N+ +VD+ + G + A Q+ M P
Sbjct: 459 LKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM---P 514
Query: 301 D--STIWRTLLGA 311
D + W L+ A
Sbjct: 515 DRNAVSWNALISA 527
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD +P R V W +L+ Y RN +A LF + R S PD VT +L C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 144 AHLGALEFGEKIHRYISEHGYGSK--MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
++H + + G+ + + + N L+ Y + L +A +F+ +PEKD V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
++ +I+G +G ++I F M+++G P D TF+GVL A
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 10/311 (3%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLRDGYQ 62
Y+ +S +E F LF +M + T P +F + C Q+HA ++ G+
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 63 LDSQLMTT--LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L + L+ Y + AC LF+EIP++D+V +N LI+ Y ++ +++ LF
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLF- 238
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +SG +P D T VL+A L G+++H G+ ++ N ++ YSK
Sbjct: 239 -LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
+ +F MPE D VS++ +IS + ++ F MQ G + F +
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG-CVVDLLGRAGLLDQAYQLITSMGVK 299
LS ++ + G +I H G +VD+ + + ++A + S+ +
Sbjct: 358 LSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 300 PDSTIWRTLLG 310
+ W L+
Sbjct: 416 T-TVSWTALIS 425
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 29/301 (9%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-- 229
N++I+ + K G + A ++F MP++ VV+W+ ++ A N H +A + F M R+
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 230 VFPDDQTFTGVLSACSHC---GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
PD TFT +L C+ V + F ++ F P + ++ L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG--FDTNPFLTVSNVLLKSYCEVRRL 200
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG----DYVLL 342
D A L + K DS + TL+ K E + HL LK ++SG D+
Sbjct: 201 DLACVLFEEIPEK-DSVTFNTLITG--YEKDGLYTESI--HLF-LKMRQSGHQPSDFTFS 254
Query: 343 LNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS-HPRINEIYQM 401
L + VG L +F + L + V ++D S H R+ E +
Sbjct: 255 GVLKAVVG-------LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 402 LDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKN 461
DE+ +L Y I+S A++ +L + E + F P T + +A N
Sbjct: 308 FDEM-PELDFVSYNVVISSYSQ---ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 462 L 462
L
Sbjct: 364 L 364
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/460 (39%), Positives = 279/460 (60%), Gaps = 5/460 (1%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRD-TVAWNVLISC 105
G Q+H RVL + D+ + ++LMD+Y A +FD RD AW+ +++
Sbjct: 263 GRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAG 322
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
Y++N R +AL LF + RE G D T V ACA++G +E G ++H + + Y
Sbjct: 323 YVQNGREEEALDLFRRMLRE--GVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYK 380
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
L ++++ MY+KCG+L A +F K++ W++M+ A +G GR AIE F M
Sbjct: 381 LDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERM 440
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
+ P++ T GVLSACSH GLV EG ++ +M +++GI+P+I HY C+VDL GR+GL
Sbjct: 441 TAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGL 500
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNL 345
LD+A I + ++ +W+TLL ACR+H+H + E L++L+ ++G YV+L N+
Sbjct: 501 LDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNI 560
Query: 346 YSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEI 405
Y++ W ELR M E+ ++ PG S I LK VH FV D SHP+ EIY L+++
Sbjct: 561 YATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKL 620
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
++LK GY + +H++ E++ AL +HSEKLAIAFG+++TP GT +R+ KNLR+C
Sbjct: 621 VERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVC 680
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH K +S RE+++RD RFHHF++ CSC D+W
Sbjct: 681 EDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 34/323 (10%)
Query: 19 EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTF 78
E + + N F + ++CC + G ++H +LR+G LD L ++D+Y+
Sbjct: 101 EMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKC 160
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
+ A ++F + +RD V+WN+ I I++ ++ LFD ++ ++ L+
Sbjct: 161 GQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLM 220
Query: 139 ----VLQACAHLGAL-------------------------EFGEKIHRYISEHGYGSKMN 169
A +HL + + G ++H +
Sbjct: 221 RSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAF 280
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMP--EKDV-VSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ +SL+ MY KCG L A VF +D+ +WS M++G NG +A++ F M
Sbjct: 281 VRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRML 340
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
R GV D T T V +AC++ G+V++G + K + L + +VD+ + G L
Sbjct: 341 REGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKL-DAPLASAIVDMYAKCGNL 399
Query: 287 DQAYQLITSMGVKPDSTIWRTLL 309
+ A + K + +W ++L
Sbjct: 400 EDARSIFDRACTK-NIAVWTSML 421
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 17/253 (6%)
Query: 48 GGLQIHARVLRDGYQLDSQLMT------TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNV 101
L + R R G L+++L T +++ + + +A +FDE P R W +
Sbjct: 23 AALLLRGRAARGG-SLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTL 81
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
IS R R D + F + E P+ V++ CA +G +E G+++H ++
Sbjct: 82 TISGCARRGRYADGMRAFAEM-LAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLR 140
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
+G + LCN+++ MY+KCG A VF M E+D VSW+ I +G +
Sbjct: 141 NGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSG------DI 194
Query: 222 FGAMQRAGVFP--DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
G+MQ P D ++ ++S G + + L RM++ G++ N + Y L
Sbjct: 195 LGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQA-GVVFNHYTYSTAFVL 253
Query: 280 LGRAGLLDQAYQL 292
G L D QL
Sbjct: 254 AGMLLLPDLGRQL 266
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + EE LF +M ++ + + F + C + G Q+H V +
Sbjct: 319 MVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+LD+ L + ++D+Y+ +A +FD ++ W ++ Y + + R A+ LF+
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFE 438
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ E+ P+++T + VL AC+H+G + GE + + E+G + N ++ +Y
Sbjct: 439 RMTAEK--MTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYG 496
Query: 180 KCGSLGMAFE-VFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ G L A + + + + W ++S ++ H A
Sbjct: 497 RSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYA 536
>gi|414879943|tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 291/508 (57%), Gaps = 17/508 (3%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
S P F LF +MR + + + + + L Q+HA + G ++ +
Sbjct: 555 SLPVACFALFRRMRAIAVRFD----AVTLLALVPAAPLSVVPQVHALAAQVGLATETSVA 610
Query: 69 TTLMDLYS---TFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
LM Y+ F + A ++FDE+P RD V+WN ++S + +N DAL L+ +
Sbjct: 611 NCLMSTYARGGAFGAAL-ARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALDLYRRMR 669
Query: 124 REE-SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GYGSKMNLCNSLIAMYSK 180
E SG +PD VT + VL + AHLGA G Y+ + G+ + + LCN+LI +++
Sbjct: 670 SPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDAEHYVVQRLPGFRTNVQLCNALINFHAR 729
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A ++F MP K +VSW+A+I+G M+G+G A+ F M G+ PD+ GV
Sbjct: 730 CGSLPRAQQLFDEMPAKSIVSWTALITGHGMHGNGGVAVSLFERMVSEGIHPDNVAMVGV 789
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL DEG M+ M + + P + HY C+VDLLGRAG L++A +LI+SM +
Sbjct: 790 LSACSHAGLYDEGRMYFSTMESVYKLRPTLEHYTCIVDLLGRAGRLEEARELISSMPMPA 849
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IHK+V +GE ++EL+ + G YVL+ N+Y+ G + V +R
Sbjct: 850 DGAVWGALLGACKIHKNVEIGEEAFARVVELEPRNVGYYVLMSNIYTDTGQLDCVARVRA 909
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++GL+ PGCS + G VH F+ DD SHP+ IY+++ + +K V E
Sbjct: 910 VMRKRGLKKEPGCSYVEHNGRVHLFMADDHSHPQARRIYELVTRLELMVKEKSGVRESVV 969
Query: 421 ELHNLGAEEKGNA---LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+ G EK A + +HSEKLA+AFG+L T G+ I V KNLR+C DCH+F K +S
Sbjct: 970 AVPK-GRMEKEAAQPLVGFHSEKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLKAVSA 1028
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
NR ++RD RFH F G CSC DYW
Sbjct: 1029 TTNRSFLVRDASRFHRFDGGVCSCKDYW 1056
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 288/492 (58%), Gaps = 7/492 (1%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
+ +M + + + + IK C +L G +H + G+ LD+ + L+ YS
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
A ++FD +P++ VAWN L+S + +N DA+ +F + ESG +PD T +
Sbjct: 155 CGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQM--RESGFEPDSATFV 212
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
+L ACA GA+ G +H+YI G + L +LI +YS+CG +G A EVF M E
Sbjct: 213 SLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+V +W+AMIS +G+G+ A++ F M+ G P++ TF VLSAC+H GLV++G
Sbjct: 273 NVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSV 332
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST---IWRTLLGACR 313
RM++ + ++P + H+ C+VD+LGRAG LD+AY+ I + ++T +W +LGAC+
Sbjct: 333 YKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACK 392
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+H++ LG + + LI L+ + G +V+L N+Y+ G ++V +R+ M L+ G
Sbjct: 393 MHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGY 452
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S I ++ + F + D SH EIY+ L+ + + K GY +H + EEK A
Sbjct: 453 SIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFA 512
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L YHSEKLA+AFG+L T + I V KNLRIC DCH+ K +S V NR++I+RD+LRFHH
Sbjct: 513 LRYHSEKLAVAFGLLKTVD-SAITVVKNLRICEDCHSAFKYISIVSNRQIIVRDKLRFHH 571
Query: 494 FREGRCSCNDYW 505
F+ G CSC DYW
Sbjct: 572 FQNGSCSCLDYW 583
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V + + E+ +F +MR+ + + C + ++ G +H ++ +G
Sbjct: 179 LVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEG 238
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ +L T L++LYS +A ++FD++ + + AW +IS Y + + A+ LF+
Sbjct: 239 LDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFN 298
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY---GSKMNLCNSLIAM 177
+ ++ G P++VT + VL ACAH G +E G +++ ++E G + ++C ++ M
Sbjct: 299 KM-EDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVC--IVDM 355
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVS----WSAMISGLAMN 212
+ G L A+ + + + W+AM+ M+
Sbjct: 356 LGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMH 394
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 104/272 (38%), Gaps = 53/272 (19%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+++H ++ YG +L LI + ++ +F +P D ++++I +
Sbjct: 26 QQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC---------------------------- 244
+ + M + V P + TFT V+ +C
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQ 145
Query: 245 -------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM- 296
S CG ++ DRM + ++ + +V + GL + A ++ M
Sbjct: 146 AALVTFYSKCGDMEAARQVFDRMPE-----KSVVAWNSLVSGFEQNGLAEDAIRVFYQMR 200
Query: 297 --GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY-----VLLLNLYSSV 349
G +PDS + +LL AC ++LG V ++++ E D L+NLYS
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIV----SEGLDVNVKLGTALINLYSRC 256
Query: 350 GDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
GD K +E+ + M E + T S G G
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/509 (37%), Positives = 298/509 (58%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + P F KM+ + + +H ++R G
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447
Query: 61 YQLDSQLM-TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ ++ ++ ++D+Y+ A K+F+ I +D ++WN LI+ Y +N +A+ ++
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY 507
Query: 120 DNLNREESGCK---PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
+ CK P+ T + +L A AH+GAL+ G +IH + + + + LI
Sbjct: 508 KMMEE----CKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLID 563
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+Y KCG L A +F +P++ V+W+A+IS ++GH ++ FG M GV PD T
Sbjct: 564 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 623
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F +LSACSH G V+EG R+ +++GI P++ HYGC+VDLLGRAG L+ AY I M
Sbjct: 624 FVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDM 682
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
++PD++IW LLGACRIH ++ LG+ + L E+ ++ G YVLL N+Y++VG WE V
Sbjct: 683 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 742
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R E+GL+ TPG STI + V F + SHP+ EIY+ L + ++K GY+
Sbjct: 743 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIP 802
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ + L ++ +EK + L+ HSE+LAIAFG+++TPP + IR+ KNLR+C DCHN K +S
Sbjct: 803 DYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFIS 862
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ RE+++RD RFHHF++G CSC DYW
Sbjct: 863 RITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 174/373 (46%), Gaps = 7/373 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + + + ++MR + I N + C + + + IH V++ G
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++Y+ F +A K F ++ D V+WN +I+ Y +N A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF- 405
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYS 179
+ + +G +PD +T + + A + +H +I G+ + + N+++ MY+
Sbjct: 406 -VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYA 464
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFT 238
K G L A +VF+ + KDV+SW+ +I+G A NG +AIE + M+ + P+ T+
Sbjct: 465 KLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 524
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L A +H G + +GM R+ K + ++ C++D+ G+ G L A L +
Sbjct: 525 SILPAYAHVGALQQGMRIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP- 582
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVI-EHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ S W ++ IH H ++ E L E + +V LL+ S G E+ K
Sbjct: 583 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 358 LREFMNEKGLQTT 370
M E G++ +
Sbjct: 643 CFRLMQEYGIKPS 655
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 35 FAIKCCMKFC-SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
+ +K C +L+ G +IH + G+Q + + +L+ +YS F + A LFD++P
Sbjct: 219 YTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPF 278
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
RD +WN +IS I+N AL + D + E G K + VT + +L C LG +
Sbjct: 279 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLE--GIKMNFVTVVSILPVCPQLGDISTAM 336
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
IH Y+ +HG + + N+LI MY+K G+L A + F+ M DVVSW+++I+ N
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
A F MQ G PD T + S + + + ++ ++
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
VVD+ + GLLD A+++ + VK D W TL+ + + V + + E K
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIILVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515
Query: 334 --QESGDYVLLLNLYSSVG 350
G +V +L Y+ VG
Sbjct: 516 IIPNQGTWVSILPAYAHVG 534
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 22/371 (5%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTF-EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+HA ++ G + T L++LY+ + S C FD+IPQ+D WN +IS Y+ N
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCT-FDQIPQKDVYTWNSMISAYVHNG 196
Query: 111 RTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+A+ C + L E +PD T VL+AC G L G +IH + + G+ +
Sbjct: 197 HFHEAIGCFYQLLLVSE--IRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVF 251
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ SLI MYS+ G G+A +F MP +D+ SW+AMISGL NG+ A++ M+ G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ + T +L C G + M+ + K G+ ++ ++++ + G L+ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKH-GLEFDLFVSNALINMYAKFGNLEDA 370
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLY 346
+ M + D W +++ A + + V H +K Q +G D + L++L
Sbjct: 371 RKAFQQMFIT-DVVSWNSIIAAYEQND-----DPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 347 SSVG---DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
S V D + + + F+ +G + + + + D +H ++ EI + D
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH-KVFEIILVKD 483
Query: 404 EINKQLKIAGY 414
I+ I GY
Sbjct: 484 VISWNTLITGY 494
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 38/247 (15%)
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
F + +H + G + + L+ +Y+ G + ++ F +P+KDV +W++MIS
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 211 MNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACS--------HCGLVDEGMMF----- 256
NGH +AI F + + PD TF VL AC HC G +
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVA 253
Query: 257 --LDRMSKDFGI----------LP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVK 299
L M FG +P ++ + ++ L + G QA ++ M G+K
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313
Query: 300 PDSTIWRTLLGACR----IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ ++L C I + + VI+H +E S L+N+Y+ G+ E
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSN---ALINMYAKFGNLEDA 370
Query: 356 KELREFM 362
++ + M
Sbjct: 371 RKAFQQM 377
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 296/551 (53%), Gaps = 47/551 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIK--------------C------- 39
MV YS E+ LFEKM++++I + S AI C
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 40 --------------CMKFCSLMGGLQIHARVLR-------DGYQLDSQLMTTLMDLYSTF 78
C +LM G +IH ++ +G+ ++ ++ L+D+Y+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 79 EKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+K A +FD + +RD V W V+I Y ++ AL L + E+ +P+ T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 137 LLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
L ACA L AL G++IH Y + + + N LI MY+KCGS+ A VF M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
K+ V+W+++++G M+G+G +A+ F M+R G D T VL ACSH G++D+GM
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ +RM FG+ P HY C+VDLLGRAG L+ A +LI M ++P +W L CRIH
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
V LGE E + EL + G Y LL NLY++ G W+ V +R M KG++ PGCS
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720
Query: 376 I-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
+ G+KG F V D +HP EIYQ+L + +++K GYV E LH++ EEK + L
Sbjct: 721 VEGIKGTT-TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLL 779
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
HSEKLA+A+G+L TP G IR+ KNLR+C DCH +S + + ++I+RD RFHHF
Sbjct: 780 FEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHF 839
Query: 495 REGRCSCNDYW 505
+ G CSC YW
Sbjct: 840 KNGSCSCKGYW 850
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 172/386 (44%), Gaps = 13/386 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R+Y + + YLF M + + F K C + S+ G HA L G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+ +YS +A K+FDE+ D V+WN +I Y + + + AL +F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E GC+PD++T + VL CA LG G+++H + M + N L+ MY+K
Sbjct: 218 RMT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A VF M KDVVSW+AM++G + G DA+ F MQ + D T++
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL-------- 292
+S + GL E + +M GI PN V+ G L ++
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 293 --ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
+ G ++ + L+ K V + + L K ++ + +++ YS G
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL-SPKERDVVTWTVMIGGYSQHG 454
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTI 376
D K EL M E+ QT P TI
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTI 480
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD--VVSWSAMISGLAMNGHGRDAIESFGAM 225
+NL + LI+ Y G L A + + P D V W+++I NG + FG M
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
PD+ TF V AC V G +S G + N+ +V + R
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGES-AHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 286 LDQAYQLITSMGVKPDSTIWRTLL 309
L A ++ M V D W +++
Sbjct: 178 LSDARKVFDEMSVW-DVVSWNSII 200
>gi|357119982|ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Brachypodium distachyon]
Length = 555
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 282/502 (56%), Gaps = 38/502 (7%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF-------- 88
++ C+K+ + +QIH+R+ + G + ++ L+ LY ++ EA +LF
Sbjct: 59 LRACLKYSDIYAAMQIHSRLTKVGLLRNQHIIAPLLRLYIDYDCMTEARELFWLMLEWST 118
Query: 89 -------------------------DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
+P +D V+WN +I+ +R+ +DA+ LF L
Sbjct: 119 DPFHGNLMLTGFLKGGQLDKAYQIFKRMPVKDVVSWNSMIAGAVRSSHLKDAMILFSRL- 177
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
SG PD + VL ACA GAL +G +HR ++E G L ++L+ MY+KCG
Sbjct: 178 -VNSGLVPDGFSFSSVLSACARAGALFYGVWVHRLMAELGVEKNNILISALVDMYAKCGR 236
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ ++ E+F + V W+ MI LA +G G+D + F M+ AGV PD TF +L+A
Sbjct: 237 IDVSVEIFNTVKRNHVPMWNTMIGSLAAHGLGQDVVVLFHRMEHAGVVPDGVTFVALLTA 296
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSHCG+V+E + + M+ + I P + HYG +VD L RAGLLD+AY L+ SM VKPD+
Sbjct: 297 CSHCGMVEEARQYFEAMTTKYYITPKVEHYGAMVDTLSRAGLLDEAYNLVRSMVVKPDAV 356
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IWR LL ACR H LGE IE ++ Q SGDY LL N+YSS+ W + + +
Sbjct: 357 IWRALLSACRRHHQTKLGEITIEQMV---CQGSGDYTLLSNIYSSINRWVDSENVWKERK 413
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+K ++ G S + L G HEF D SHP ++IY++L ++K+ K GY +
Sbjct: 414 KKKVRKNKGLSWVELGGSTHEFKAGDRSHPDTDDIYRVLHGLSKKAKAEGYSPSTELVMK 473
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ EE+ L++HSEKLA+A+ VL T PGT I V+KNL+ C DCH + K++S V R +
Sbjct: 474 DVSHEEREENLTFHSEKLAVAYSVLKTGPGTEIMVSKNLQTCGDCHEWIKIISKVLCRVI 533
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
I+RDR RFH F G CSC DYW
Sbjct: 534 IMRDRARFHRFESGCCSCKDYW 555
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ SS ++ LF ++ + + F+ S + C + +L G+ +H + G
Sbjct: 157 MIAGAVRSSHLKDAMILFSRLVNSGLVPDGFSFSSVLSACARAGALFYGVWVHRLMAELG 216
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ L++ L+D+Y+ + + ++F+ + + WN +I + +D + LF
Sbjct: 217 VEKNNILISALVDMYAKCGRIDVSVEIFNTVKRNHVPMWNTMIGSLAAHGLGQDVVVLFH 276
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYS 179
+ E +G PD VT + +L AC+H G +E + ++ Y K+ +++ S
Sbjct: 277 RM--EHAGVVPDGVTFVALLTACSHCGMVEEARQYFEAMTTKYYITPKVEHYGAMVDTLS 334
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+ + + M K D V W A++S
Sbjct: 335 RAGLLDEAYNLVRSMVVKPDAVIWRALLSA 364
>gi|356509555|ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 542
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 196/503 (38%), Positives = 301/503 (59%), Gaps = 8/503 (1%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
+S++P F + P F F +KCC G Q+HA + + G+ D
Sbjct: 44 LSTNPSTTTLSFAPSPKPPTPPYNFTFPFLLKCCAPSKLPPLGKQLHALLTKLGFAPDLY 103
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ L+ +YS F A LFD +P RD V+W +IS + + +A+ LF+ + +
Sbjct: 104 IQNVLVHMYSEFGDLVLARSLFDRMPHRDVVSWTSMISGLVNHDLPVEAISLFERM--LQ 161
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG--SKMNLCNSLIAMYSKCGSL 184
G + ++ T + VL+A A GAL G K+H + E G SK N+ +L+ MY+K G +
Sbjct: 162 CGVEVNEATVISVLRARADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKSGCI 221
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
+VF + ++DV W+AMISGLA +G +DAI+ F M+ +GV PD++T T VL+AC
Sbjct: 222 --VRKVFDDVVDRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTTVLTAC 279
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
+ GL+ EG M + + +G+ P+I H+GC+VDLL RAG L +A + +M ++PD+ +
Sbjct: 280 RNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDAVL 339
Query: 305 WRTLLGACRIHKHVTLGERVIEHL--IELKAQESGDYVLLLNLYSSVGDWEKVKELREFM 362
WRTL+ AC++H ER+++HL +++A +SG Y+L N+Y+S G W E+RE M
Sbjct: 340 WRTLIWACKVHGDDDRAERLMKHLEIQDMRADDSGSYILTSNVYASTGKWCNKAEVRELM 399
Query: 363 NEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSEL 422
N+KGL G S I + G VHEFV+ D +HP EI+ L E+ +++ GY ++ L
Sbjct: 400 NKKGLVKPLGSSRIEIDGGVHEFVMGDYNHPEAEEIFVELAEVMDKIRKEGYDPRVSEVL 459
Query: 423 HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNRE 482
+ EEK L +HSEKLA+A+G++ G+TI + KNLR C DCH F K++S + R+
Sbjct: 460 LEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIWIVKNLRSCEDCHEFMKLISKICKRD 519
Query: 483 VIIRDRLRFHHFREGRCSCNDYW 505
+++RDR+RFHHF+ G CSC DYW
Sbjct: 520 IVVRDRIRFHHFKNGECSCKDYW 542
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 292/507 (57%), Gaps = 6/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + S EE F MR++ + + + +CC ++ G Q+HA V+R G
Sbjct: 37 MVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG 96
Query: 61 YQLDSQLMTTLMDLY--STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D + ++L +Y F + EA +P + V+ N IS +N AL
Sbjct: 97 LDRDMCVGSSLAHMYMRCGFLRDGEAA--LRALPSLNIVSCNTTISGRTQNGDAEGALEF 154
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + +G + + VT + + +C+ L AL G++IH + G + + SL+ MY
Sbjct: 155 FCLMR--GAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMY 212
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CG LG + V D+V SAMIS +GHG+ A+ F M AG P++ TF
Sbjct: 213 SRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFL 272
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L ACSH GL DEGM + M+K +G+ P++ HY C+VDLLGR+G L++A LI SM V
Sbjct: 273 TLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPV 332
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW+TLL AC+ K + ER+ E +IEL +S YVLL N+ ++ WE V ++
Sbjct: 333 QPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKV 392
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M E+ ++ PG S + LKG +H+F D SH R EI + L+E+ +++ GY ++
Sbjct: 393 RETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDM 452
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ H++ EEK +L++HSEKLAIAF L+ P G IRV KNLR+C DCH K++S V
Sbjct: 453 SMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKV 512
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G+CSC DYW
Sbjct: 513 IGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A KLFDE+P R+ WN +++ + ++L F + RE G +PD+ + + C
Sbjct: 19 ARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE--GMQPDEYGLGSLFRCC 76
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L + G ++H Y+ G M + +SL MY +CG L + +P ++VS +
Sbjct: 77 AGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCN 136
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
ISG NG A+E F M+ AGV + TF +++CS + +G
Sbjct: 137 TTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG 186
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N LI Y K G L A ++F MP ++V +W+AM++GL +G +++ F AM+R G+
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 232 PDDQTFTGVLSACSHCGLVD 251
PD+ + C+ GL D
Sbjct: 64 PDEYGLGSLFRCCA--GLRD 81
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 287/500 (57%), Gaps = 7/500 (1%)
Query: 6 SMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
S +E MR+ + N + S + C L +HA ++ G D
Sbjct: 147 SADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDV 203
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ ++L+D Y ++FDE+ RD V WN +I+ + ++ A+ LF + +
Sbjct: 204 FVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELF--MRMK 261
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
++G + T VL+AC + LE G ++H ++ + Y + L N+L+ MY KCGSL
Sbjct: 262 DAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLE 319
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +F MP++DV+SWS M+SGLA NG +A+ F M+ GV P+ T GVL ACS
Sbjct: 320 DADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACS 379
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLV++G + M + FGI P H+ C+VDLLGRAG LD+A + I M ++PDS IW
Sbjct: 380 HAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIW 439
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
RTLLGACR+HK+ +L +++L+ + G VLL N Y+ + W ++ + M ++
Sbjct: 440 RTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDR 499
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
G++ PG S I L+ VH F+ D+SHP + I Q L+ + ++K GYV + L +L
Sbjct: 500 GMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDL 559
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
E+K + L YHSEK+AI FG + G IR+ KNLRIC DCH FAK++S R ++I
Sbjct: 560 PTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVI 619
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RD +RFHHF++G CSC DYW
Sbjct: 620 RDPVRFHHFQDGACSCGDYW 639
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 8/244 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S LF +M+ +N + ++ C L G Q+HA VL+
Sbjct: 240 IIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK-- 297
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D L L+D+Y +A LF +PQRD ++W+ ++S +N ++ +AL +FD
Sbjct: 298 YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFD 357
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ + G P+ VT + VL AC+H G +E G R + G + N ++ +
Sbjct: 358 LMKSQ--GVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A E GM E D V W ++ M H ++ ++ A + + PDDQ
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRM--HKNASLAAYAAREILKLEPDDQGAR 473
Query: 239 GVLS 242
+LS
Sbjct: 474 VLLS 477
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 133/291 (45%), Gaps = 21/291 (7%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ-----LMTTLMDLYSTFEKSF 82
+P + + +K C++ + G IH V G + +L +Y+ F
Sbjct: 62 ADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLD 121
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIR-NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQ 141
+A ++FD +P R+ V W +++ + R ++AL + R+ G P+ T VL
Sbjct: 122 DALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD--GVAPNAYTFSSVLG 179
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
AC G L +H + G S + + +SLI Y K G L VF M +D+V
Sbjct: 180 ACTTPGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVV 236
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---LD 258
W+++I+G A +G G AIE F M+ AG + T T VL AC+ +++ G +
Sbjct: 237 WNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVL 296
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ +D IL N ++D+ + G L+ A L M + D W T++
Sbjct: 297 KYDRDL-ILHN-----ALLDMYCKCGSLEDADALFHRMPQR-DVISWSTMV 340
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-----GSKMNLCNSLIAMYSKCGSL 184
+ D V+ +++ C G + G IHR++ HG + + NSL +MY+K G L
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLA-MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
A +F GMP ++VV+W+ +++ LA +G ++A+ AM+R GV P+ TF+ VL A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C+ G+ + + + G+ ++ ++D + G LD ++ M V D
Sbjct: 181 CTTPGM----LTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM-VTRDLV 235
Query: 304 IWRTLLG 310
+W +++
Sbjct: 236 VWNSIIA 242
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 292/507 (57%), Gaps = 6/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + S EE F MR++ + + + +CC ++ G Q+HA V+R G
Sbjct: 145 MVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG 204
Query: 61 YQLDSQLMTTLMDLYST--FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
D + ++L +Y F + EA +P + V+ N IS +N AL
Sbjct: 205 LDRDMCVGSSLAHMYMRCGFLRDGEAA--LRALPSLNIVSCNTTISGRTQNGDAEGALEF 262
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + +G + + VT + + +C+ L AL G++IH + G + + SL+ MY
Sbjct: 263 FCLMR--GAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMY 320
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CG LG + V D+V SAMIS +GHG+ A+ F M AG P++ TF
Sbjct: 321 SRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFL 380
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L ACSH GL DEGM + M+K +G+ P++ HY C+VDLLGR+G L++A LI SM V
Sbjct: 381 TLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPV 440
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD IW+TLL AC+ K + ER+ E +IEL +S YVLL N+ ++ WE V ++
Sbjct: 441 QPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKV 500
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M E+ ++ PG S + LKG +H+F D SH R EI + L+E+ +++ GY ++
Sbjct: 501 RETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDM 560
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ H++ EEK +L++HSEKLAIAF L+ P G IRV KNLR+C DCH K++S V
Sbjct: 561 SMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKV 620
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G+CSC DYW
Sbjct: 621 IGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA G D L+ Y+ A LF+ IP+R+ ++WN+LI Y++N
Sbjct: 63 QLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNG 122
Query: 111 RTRDALCLFDN--------------------LNRE---------ESGCKPDDVTCLLVLQ 141
A LFD LN E G +PD+ + +
Sbjct: 123 DLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFR 182
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
CA L + G ++H Y+ G M + +SL MY +CG L + +P ++VS
Sbjct: 183 CCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVS 242
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+ ISG NG A+E F M+ AGV + TF +++CS + +G
Sbjct: 243 CNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG 294
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N L+ Y+ G A +F+ +P+++V+SW+ +I G NG A + F M V
Sbjct: 81 NHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNV- 139
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD---- 287
T+ +++ ++ GL +E + F M ++ G+ P+ + G + AGL D
Sbjct: 140 ---ATWNAMVAGLTNSGLNEESLGFFFAMRRE-GMQPDEYGLGSLFRCC--AGLRDVVSG 193
Query: 288 -QAYQLITSMGVKPDSTIWRTL 308
Q + + G+ D + +L
Sbjct: 194 RQVHAYVVRSGLDRDMCVGSSL 215
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 190/467 (40%), Positives = 285/467 (61%), Gaps = 8/467 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + SS P L + + P + ++ C + SL G +IHA ++G
Sbjct: 92 VLRIAASSSRPSLALALHAR---RLAPPDTHTYPPLLQACARLLSLRHGERIHAEAAKNG 148
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
+ +L+ LY A ++FDEIP +R+ V+WN +++ + N R + L +
Sbjct: 149 LATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSMLNGFAANGRPNEVLTI 208
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + PD T + VL A A +GAL G ++H Y+++ G ++ N+LI +Y
Sbjct: 209 FREM--LDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLY 266
Query: 179 SKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+KCG + A VF+ M + VVSW+++I GLA+NG G++A+E FG M+R + P + T
Sbjct: 267 AKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITM 326
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
GVL ACSHCGLVD+G M+ +RM +++ I P I H GC+VDLLGRAG + +AY I +M
Sbjct: 327 VGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMP 386
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
++P++ +WRTLLGAC +HK + LGE L+EL SGDYVLL NLY++VG W V
Sbjct: 387 LEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHV 446
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
LR+ M + G++ PG S + L+ V+EFV+ D SHP +IYQML E+ L+ GY+
Sbjct: 447 LRKTMVKDGVRKNPGRSLVELRNSVYEFVMGDRSHPESEQIYQMLAEVADSLRREGYIPR 506
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRI 464
++ L ++ EEK AL+YHSE+LAIAF +L + PGT IR+ KNLR+
Sbjct: 507 TSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGTPIRIVKNLRL 553
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 14/284 (4%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQ-----LDSQLMTTLMDLYSTFEKSFEACKL 87
C ++ + SL Q+HAR LR G L L+ L L + + + L
Sbjct: 19 CVALLRLHLAAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLR-YAVAVL 77
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
+P D + N ++ + R AL L PD T +LQACA L
Sbjct: 78 TRVLPDPDPFSLNTVLRIAASSSRPSLALAL-----HARRLAPPDTHTYPPLLQACARLL 132
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAM 205
+L GE+IH +++G + + + NSL+ +Y CG A VF +P E+++VSW++M
Sbjct: 133 SLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSM 192
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
++G A NG + + F M PD T VL+A + G + G ++K G
Sbjct: 193 LNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTK-VG 251
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++ N H ++DL + G ++ A ++ MG + W +L+
Sbjct: 252 LVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLI 295
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 295/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + P+E L M + R N F + +K S G QIHA ++
Sbjct: 12 LIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD 71
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ + A +FD++ ++ V+WN LI+ + R L +F
Sbjct: 72 WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 131
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T V A A +GALE G+ +H ++ + G + N+++ MY+K
Sbjct: 132 EMQR--NGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAK 189
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + +KD+V+W++M++ A G GR+A+ F M++ GV + TF +
Sbjct: 190 SGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSI 249
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + D M K+ + P I HY VVDLLGRAGLL+ A I M +KP
Sbjct: 250 LTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 308
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LLG+CR+HK+ +G+ +H+ EL ++G VLL N+Y+S G W+ +R+
Sbjct: 309 TAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRK 368
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV +D +HPR EIY+ +EI+ Q++ AGYV
Sbjct: 369 MMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDY 428
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +E+ L YHSEK+A+AF ++ P G TIR+ KN+RIC DCH+ + +S V+
Sbjct: 429 VLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFE 488
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 489 REIVVRDTNRFHHFSSGSCSCGDYW 513
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 263/393 (66%), Gaps = 2/393 (0%)
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
+ L LF + ++S K ++VT + ++ ACA LGAL G H Y+ +H +
Sbjct: 132 KSVLTLF--IEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGT 189
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
+LI MYSKCG L +A ++F +P +D + ++AMI G A++G+G A++ F M G+ P
Sbjct: 190 ALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAP 249
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
DD T + +CSH GLV+EG + M + +G+ P + HYGC+VDLLGRAG L +A +
Sbjct: 250 DDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEER 309
Query: 293 ITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDW 352
+ +M +KP++ IWR+LLGA R+H ++ +GE V++HLI+L+ + SG+YVLL N+Y+S+ W
Sbjct: 310 VLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRW 369
Query: 353 EKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+ VK +R+ M + G+ PG S + + G +HEF++ D +HPR EIY L+E++++L
Sbjct: 370 DDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEY 429
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
G+ L ++ EEK +ALSYHSE+LAIAF ++A+ IR+ KNLR+C DCH +
Sbjct: 430 GHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSS 489
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++S +Y RE+I+RDR RFHHF+EG CSC+DYW
Sbjct: 490 KLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 522
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +M++ I N I C + +L G H VL+ +L+ + T L+D+YS
Sbjct: 137 LFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYS 196
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
AC+LFD++P RDT+ +N +I + + AL LF + E G PDDVT
Sbjct: 197 KCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLE--GLAPDDVTL 254
Query: 137 LLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
++ + +C+H+G +E G + + E +G K+ L+ + + G L A E MP
Sbjct: 255 VVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMP 314
Query: 196 EK-DVVSWSAMISGLAMNG 213
K + V W +++ ++G
Sbjct: 315 MKPNAVIWRSLLGAARVHG 333
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 290/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ + E +F +MR + I + + + C +L G QIHA ++R
Sbjct: 243 MVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + + + L+D+YS A +F + ++ ++W LI Y +N + +A+ +F
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G PDD T V+ +CA+L +LE G + H G + + N+L+ +Y K
Sbjct: 363 EMQRD--GIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGK 420
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M D VSW+A++SG A G ++ I+ F M GV PD TF GV
Sbjct: 421 CGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGV 480
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS G V++G + M KD GI+P HY C++DL R+G L +A + I M + P
Sbjct: 481 LSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHP 540
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL ACR+ + +G+ E+L+E+ Q YVLL +++++ G W +V +LR
Sbjct: 541 DAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRR 600
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ ++ PGCS I K VH F DD SHP IY+ L+ +N ++ GY +++S
Sbjct: 601 GMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSS 660
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ +K + +S+HSEKLAIAFG++ P IR+ KNLR+CVDCHN K +S +
Sbjct: 661 VLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITG 720
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD +RFH F +G CSC D+W
Sbjct: 721 RDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 77/385 (20%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q H ++LR G+ ++ + + L+D+Y+ +A + FDE+ ++ V +N +I+ +R
Sbjct: 159 GKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLR 218
Query: 109 NQRTRDALCLFDNLNREES-----------------------------GCKPDDVTCLLV 139
+ +A LF+ + +S G D T +
Sbjct: 219 CKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSI 278
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L AC L ALE G++IH YI Y + + ++L+ MYSKC S+ +A VF+ M K++
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
+SW+A+I G NG +A+ F MQR G+ PDD T V+S+C++ ++EG F
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQF--- 395
Query: 260 MSKDFGILPNIHHY----GCVVDLLGRAGLLDQAYQLITSM------------------- 296
++ + HY +V L G+ G ++ A++L M
Sbjct: 396 --HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453
Query: 297 ---------------GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD--Y 339
GVKPD + +L AC V G + + D Y
Sbjct: 454 RAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513
Query: 340 VLLLNLYSSVGDWEKVKELREFMNE 364
+++LYS G K+KE EF+ +
Sbjct: 514 TCMIDLYSRSG---KLKEAEEFIKQ 535
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LF + QRD V++N +I+ + A+ ++ L + +S +P +T ++ A + L
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK-------------------------- 180
G G++ H I G+G+ + + L+ MY+K
Sbjct: 154 GDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213
Query: 181 -----CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
C + A +F+ M ++D ++W+ M++G NG +A+E F M+ G+ D
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273
Query: 236 TFTGVLSACSHCGLVDEG 253
TF +L+AC +++G
Sbjct: 274 TFGSILTACGALSALEQG 291
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 293/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ ++ S E+ +F +MR+ + N F S ++ SL IH L+ G
Sbjct: 219 MISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAG 278
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + LM Y+ ++ +LF+ + R+ V+WN +I Y++ AL LF
Sbjct: 279 LSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFS 338
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ R + + +VT +L+ACA L ALE G ++H ++ YG + + N+LI MY+K
Sbjct: 339 NMLRYQ--VQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAK 396
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F + +D VSW+A+I G +M+G G +AI+ F M+ PD+ TF GV
Sbjct: 397 CGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGV 456
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS+ G +DEG + M +D+GI P + HY C+V L+GR+G LDQA + I + +P
Sbjct: 457 LSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEP 516
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IWR LLGAC IH V LG + ++EL+ ++ +VLL N+Y+ W V +R+
Sbjct: 517 SVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRK 576
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG++ PG S I +G VH F V D SH + I ML+ +N + + AGY ++ +
Sbjct: 577 HMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNA 636
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +EK L HSE+LA+AFG++ P G IR+ KNLRICVDCH+ K++S +
Sbjct: 637 VLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVG 696
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF G CSC DYW
Sbjct: 697 RDIIVRDMNRFHHFENGSCSCADYW 721
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 9/322 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S+ E F LF ++ + NPF + +K + G +H VL+ G
Sbjct: 17 LIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVG 76
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y ++ + T L+D YS A ++FDEI +D V+W +I+ Y N +AL F
Sbjct: 77 YGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFS 136
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G KP++ T VL+AC L + G+ +H + + Y + + L+ +Y++
Sbjct: 137 QM--RVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTR 194
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG A+ F MP+ DV+ WS MIS A +G A+E F M+RA V P+ TF+ V
Sbjct: 195 CGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSV 254
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L A + +D K G+ ++ ++ + G ++Q+ +L ++ +
Sbjct: 255 LQASADIESLDLSKTIHGHALKA-GLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRN 313
Query: 301 DSTIWRTLLGACRIHKHVTLGE 322
D + W T+ I +V LG+
Sbjct: 314 DVS-WNTI-----IVSYVQLGD 329
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 40/315 (12%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FDE+P+R+TV++ LI Y ++ + +A LF L+ E P T VL+ +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTT--VLKLLVSM 59
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
E G +H + + GYGS + +LI YS G + MA EVF + KD+VSW+ MI
Sbjct: 60 EWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-----------SHCGL------ 249
+ A N +A+E F M+ AG P++ TF GVL AC HC +
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 250 ----VDEGMMFL-------DRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM 296
V G++ L D + FG +P ++ + ++ ++G ++A ++ M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239
Query: 297 G---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVG 350
V P+ + ++L A + + L + + H LKA S D + L+ Y+ G
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGH--ALKAGLSTDVFVSNALMACYAKCG 297
Query: 351 DWEKVKELREFMNEK 365
E+ EL E ++++
Sbjct: 298 CIEQSMELFEALSDR 312
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/507 (39%), Positives = 292/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ RA + P + ++ +P + FA + K C +L G+ +HA + G
Sbjct: 79 LTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGVHAHAVLLG 138
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ LYS K A KLFD I R VAWN +IS Y +N A+ ++
Sbjct: 139 FGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIEVYR 198
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G PD T + L ACA GAL+ G ++ R I + L +L+ MY++
Sbjct: 199 EM--RVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYAR 256
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E F + E++VV+W++MI+G M+GHG +A++ F M++ G P+D TF V
Sbjct: 257 CGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAV 316
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI-TSMGVK 299
LSAC+H GLV +G M +G++P HY +VD+ GRAGLLD A Q I S+ +
Sbjct: 317 LSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIHDSIPGE 376
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +W +LGAC++HK+ +LG V E LI L+ + VLL N+Y+ G V+++R
Sbjct: 377 PGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVR 436
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M ++ L+ G S I + GV H F + + SHP+ EIYQ L+++ ++ AGY+ E
Sbjct: 437 NTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKLIHRITDAGYMPETD 496
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT-IRVAKNLRICVDCHNFAKVLSGV 478
S LH L EE+ AL YH EKLA+AFG++ T T IR+ KNLRIC DCH K +S V
Sbjct: 497 SVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRICGDCHLAIKYMSAV 556
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+I+RD RFHHF+ G+CSC +YW
Sbjct: 557 ENREIIVRDMHRFHHFKAGKCSCQEYW 583
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 286/505 (56%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + E +F +MR + + + + + C +L G QIHA + R
Sbjct: 248 MVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTC 307
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + + L+D+YS A +F + ++ ++W +I Y +N +A+ +F
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G KPDD T V+ +CA+L +LE G + H G + + N+L+ +Y K
Sbjct: 368 EMQRD--GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGK 425
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M D VSW+A++ G A G ++ I+ F M GV PD TF GV
Sbjct: 426 CGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGV 485
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS GLVD+G + M +D I+P HY C++DL R+G L QA + I M P
Sbjct: 486 LSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCP 545
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL ACR+ + +G+ E+L++L Q YVLL ++++S G+W V +LR
Sbjct: 546 DAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRR 605
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ ++ PGCS I K VH F DD SHP IY+ L +N ++ GY +++S
Sbjct: 606 GMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSS 665
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EK + LS+HSEKLAIAFG++ PP IR+ KNLR+CVDCHN K +S +
Sbjct: 666 VLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITG 725
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD +RFH F G CSC D+W
Sbjct: 726 RDILVRDAVRFHKFSNGICSCGDFW 750
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 174/390 (44%), Gaps = 87/390 (22%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDE------------------ 90
G Q+H ++LR G+ + + L+D+Y+ +A ++FDE
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223
Query: 91 -------------IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
I +RD++ W +++ +N +AL +F + E G D T
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAE--GVGIDQYTFG 281
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
+L AC L ALE G++IH YI+ Y + + ++L+ MYSKC S+ +A VF+ M K
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK 341
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF- 256
+++SW+AMI G NG G +A+ F MQR G+ PDD T V+S+C++ ++EG F
Sbjct: 342 NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401
Query: 257 -LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM------------------- 296
L +S G+ P + +V L G+ G ++ A++L M
Sbjct: 402 CLALVS---GLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFG 458
Query: 297 ---------------GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD--- 338
GVKPD + +L AC V G + Q+ D
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSM-----QQDHDIVP 513
Query: 339 ----YVLLLNLYSSVGDWEKVKELREFMNE 364
Y +++LYS G W +K+ EF+ +
Sbjct: 514 LDDHYTCMIDLYSRSG-W--LKQAEEFIKQ 540
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 36/239 (15%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS---FEACKLFDEIPQRDTVAWNVLISC 105
GL HAR + D + + + T L S ++ + +LF +PQRD V++N L++
Sbjct: 60 GLLPHARRVFDA--MPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAG 117
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ R A + L R+E+G +P +T V+ + LG G ++H I G+G
Sbjct: 118 FSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFG 177
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGM------------------------------- 194
+ + L+ MY+K G +G A VF M
Sbjct: 178 AYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAI 237
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
E+D ++W+ M++GL NG +A++ F M+ GV D TF +L+AC ++EG
Sbjct: 238 EERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEG 296
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 293/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E LFE+M + I + + AI C +L G QIHA+ G
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ LY+ + EA F++I ++ ++WN L+S ++ +AL +F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R E+ + + T + A A L ++ G++IH + + GY S+ + NSLI++Y+K
Sbjct: 655 RMLRTEA--EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAK 712
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A+ F M E++V+SW+AMI+G + +G G +A+ F M+ G+ P+ TF GV
Sbjct: 713 SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGV 772
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV EG+ + + M K ++P HY CVVDLLGRAG LD+A + I M +
Sbjct: 773 LSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPA 832
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ IWRTLL AC IHK++ +GER HL+EL+ ++S YVL+ N+Y+ W R+
Sbjct: 833 DAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRK 892
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++G++ PG S I +K VH F D HP N+IY+ + +N++ GYV + S
Sbjct: 893 LMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFS 952
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+ +K HSEKLAIAFG+L+ IRV KNLR+C DCHN+ K +S + N
Sbjct: 953 LLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISN 1012
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF G CSC D+W
Sbjct: 1013 RSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 4/293 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF KM++ + + + + C +L G+Q+H+ ++ G D L +L+DLYS
Sbjct: 349 LFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYS 408
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A K F + V WNV++ Y + D+ +F + E G P+ T
Sbjct: 409 KCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQME--GMIPNQFTY 466
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+L+ C LGAL GE+IH ++ + G+ + +C+ LI MY+K G L +A + + +PE
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
DVVSW+AMI+G + +A++ F M+ G+ D+ F +SAC+ + +G
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ- 585
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ S G ++ ++ L R G + +AY +G K + + W +L+
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLV 637
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 133/228 (58%), Gaps = 2/228 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + + F +F +M+ + + N F ++ C +L G QIH V++ G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QL+ + + L+D+Y+ + + A ++ +P+ D V+W +I+ Y+++ +AL LF+
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G + D++ + ACA + AL G++IH G+G+ +++ N+LI++Y++
Sbjct: 554 EM--EYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYAR 611
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
CG + A+ F+ + +K+ +SW++++SGLA +G+ +A++ F M R
Sbjct: 612 CGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRT 659
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 41/389 (10%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
M + L M ++ + +N + ++ C+ SL +++H R+ + G+ +
Sbjct: 35 MEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPL 94
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L+ +L+D Y A K+FDE R +WN +I ++ + CLF + E
Sbjct: 95 LIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAE- 153
Query: 127 SGCKPDDVTCLLVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
G P+ T VL+AC A + +++H +G+ S + N LI +YSK G +
Sbjct: 154 -GITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +VF + KD+V+W AMISGL+ NG +AI F M + +FP + VLSA +
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 246 -----------HCGLVD----------EGMMFLDRMSKDFGILPNIH---------HYGC 275
HC ++ G++ L S+ I Y
Sbjct: 273 KIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332
Query: 276 VVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
++ L + G D+A +L T M +KPD +LL AC + G ++ H I K
Sbjct: 333 LISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI--K 390
Query: 333 AQESGDYVL---LLNLYSSVGDWEKVKEL 358
A S D +L LL+LYS D E +
Sbjct: 391 AGMSADIILEGSLLDLYSKCADVETAHKF 419
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 17/318 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGG-------LQIH 53
M+ + S + F LF +M + I N + + +K C+ GG Q+H
Sbjct: 130 MIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV------GGDIAFNYVKQVH 183
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
+R G+ + L+DLYS A K+F+ I +D V W +IS +N
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+A+ LF +++ E P ++ VL A + E GE++H + + G+ S+ +CN
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSS--VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNG 301
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+A+YS+ L A +F M +D VS++++ISGL G A+E F MQR + PD
Sbjct: 302 LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
T +LSAC+ G + +GM K G+ +I G ++DL + ++ A++
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 294 TSMGVKPDSTIWRTLLGA 311
+ + + +W +L A
Sbjct: 421 LTTETE-NIVLWNVMLVA 437
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/460 (39%), Positives = 283/460 (61%), Gaps = 8/460 (1%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
GLQ+HA++L+ G D + + L+D++ A K+FD + R+ V W L++ Y++
Sbjct: 246 GLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQ 305
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N + L L ++RE G ++ T ++L A A + AL G+ +H + + G +++
Sbjct: 306 NGEFEETLNLLSCMDRE--GTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRV 363
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+LI MYSKCG + +++VF M +D+++W+AMI G + +G G+ A+ F M A
Sbjct: 364 IVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSA 423
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G P+ TF GVLSAC+H LV+EG +L+++ K F + P + HY CVV +L RAG+L++
Sbjct: 424 GECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEE 483
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A + + VK D WR LL AC IH++ LG ++ E ++++ ++ G Y LL N+Y+
Sbjct: 484 AENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAK 543
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY---QMLDEI 405
W+ V +R+ M E+ ++ PG S I ++ VH F D +HP +IY Q+L E+
Sbjct: 544 ARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEM 603
Query: 406 NKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRIC 465
KQL GYV I + LH++ E+K + L+YHSEKLAIA+G++ P IRV KNLRIC
Sbjct: 604 IKQL---GYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRIC 660
Query: 466 VDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
DCH K++S V NR +I+RD RFHHFR+G C+C D+W
Sbjct: 661 EDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 122/249 (48%), Gaps = 9/249 (3%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+ +L++LY K A LFDE+ R V++NVL+ Y+ + + + LF N+ S
Sbjct: 58 LNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNM--VSS 115
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+P++ VL ACAH G + G + H ++ + G + +SL+ MYSKC + +A
Sbjct: 116 LYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLA 175
Query: 188 FEVFKGM-----PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
+V + + D ++++++ L +G +A+E G M GV D T+ V+
Sbjct: 176 LQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMG 235
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
C + G+ ++ K G+ ++ +VD+ G+ G + A ++ + + +
Sbjct: 236 LCGQIRDLGLGLQVHAQLLKG-GLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR-NV 293
Query: 303 TIWRTLLGA 311
+W +L+ A
Sbjct: 294 VVWTSLMTA 302
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 162/377 (42%), Gaps = 15/377 (3%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
Y S E LF+ M N + + + C + G+Q H + + G
Sbjct: 95 GYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVF 154
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDE-----IPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ ++L+ +YS A ++ + D +N +++ + + R +A+ +
Sbjct: 155 HHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEV 214
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ E G D VT + V+ C + L G ++H + + G + + + L+ M+
Sbjct: 215 LGRMVDE--GVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMF 272
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCG + A +VF G+ ++VV W+++++ NG + + M R G ++ TF
Sbjct: 273 GKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFA 332
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L+A + + G + R+ K GI + ++++ + G +D +Y + M
Sbjct: 333 VLLNAFAGMAALRHGDLLHARVEK-LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRN 391
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ D W ++ C +H LG++ + + L A E ++V + + S+ V E
Sbjct: 392 R-DIITWNAMI--CGYSQH-GLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNE 447
Query: 358 LREFMNE--KGLQTTPG 372
++N+ K + PG
Sbjct: 448 GFYYLNQLMKHFKVEPG 464
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 144 AHLGALEFGEKIHRYI------SEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMP 195
A+ L FG+ IH + S H + N+ NSLI +Y KC L +A +F M
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+ VVS++ ++ G +G + ++ F M + P++ FT VLSAC+H G V EGM
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 256 FLDRMSKDFGILPNIHHY--GCVVDLLGRAGLLDQAYQLITS 295
+ K FG++ HH+ +V + + +D A Q++ S
Sbjct: 143 CHGFLFK-FGLV--FHHFVKSSLVHMYSKCFHVDLALQVLES 181
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 292/490 (59%), Gaps = 5/490 (1%)
Query: 18 FEKMRQK--RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY 75
F +MR + R P N + C +L G +H V++ G ++++ +L+++Y
Sbjct: 228 FCRMRTESGRQP-NEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMY 286
Query: 76 STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVT 135
A +LF+E+P R V+WN ++ + N + LF+ + R +G PD T
Sbjct: 287 GKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR--AGINPDQAT 344
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ +L+AC G E IH YI G+ + + + +L+ +Y+K G L + ++F+ +
Sbjct: 345 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 404
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D ++W+AM++G A++ GR+AI+ F M + GV D TFT +LSACSH GLV+EG
Sbjct: 405 DRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 464
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + MS+ + + P + HY C+VDLLGR+G L+ AY+LI SM ++P S +W LLGACR++
Sbjct: 465 YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVY 524
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+V LG+ V E L+ L + +Y++L N+YS+ G W ++R M E+ L PGCS
Sbjct: 525 GNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSF 584
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +H FVV D HPR +EI+ L+E+ +++ AG + LH++ E K + ++
Sbjct: 585 IEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMIN 644
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLAIAFG+L T G + + KNLRIC DCH+ AK S + R +IIRD RFHHF
Sbjct: 645 KHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFA 704
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 705 DGLCSCRDYW 714
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 19/337 (5%)
Query: 35 FAIKCC--MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
FAI C + +CS IHARV++ D + L+ +Y +A +LFDE+P
Sbjct: 147 FAISSCTSVSYCS-----AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMP 201
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
RD V+WN L+S L F + R ESG +P++VT L V+ ACA +GAL+ G
Sbjct: 202 NRDLVSWNSLMSGLSGRGYLGACLNAFCRM-RTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+ +H + + G K + NSLI MY K G L A ++F+ MP + +VSW++M+ N
Sbjct: 261 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 320
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G+ ++ F M+RAG+ PD T +L AC+ GL + + + G +I
Sbjct: 321 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR-CGFNADIII 379
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+++L + G L+ + + + + D+ W +L +H G I+ L +L
Sbjct: 380 ATALLNLYAKLGRLNASEDIFEEIKDR-DTIAWTAMLAGYAVH---ACGREAIK-LFDLM 434
Query: 333 AQESGD-----YVLLLNLYSSVGDWEKVKELREFMNE 364
+E + + LL+ S G E+ K+ E M+E
Sbjct: 435 VKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 471
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/457 (39%), Positives = 280/457 (61%), Gaps = 2/457 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+H + L+ +L+ + + L+D+Y + EA ++F+ +P+++ V+W +++ Y +
Sbjct: 233 GSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQ 292
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N+ DAL LF L+ E G +P++ T + L +CA L L+ G + + G+ +
Sbjct: 293 NELFEDALQLF--LDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLL 350
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+CN+L+ MYSK GS+ A VF MP +DVVSW+++I G A +G R+A+E+F M A
Sbjct: 351 PVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFA 410
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
P TF GVLSAC+ GLVDEG +L+ M K+ G+ P HY C+V LL R G LD+
Sbjct: 411 EEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDE 470
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A + I S + D WR+LL +C+++++ LG RV E + +LK ++ G YVLL N+Y+
Sbjct: 471 AERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAK 530
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W+ V ++R M E G++ PG S I + VH F +D HP + +I + L E+ +
Sbjct: 531 ANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDK 590
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K+ GYV I LH++ E+K L YHSEKLA+AFG++ TP G IR+ KN+RIC DC
Sbjct: 591 IKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDC 650
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K++S R +++RD +RFH +G CSC+DYW
Sbjct: 651 HVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 156/358 (43%), Gaps = 16/358 (4%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+R N + S A+ S G Q H ++ G + + ++ +Y
Sbjct: 104 LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAH 163
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
EA K+FD + + A+N +I+ ++ + + + ++ R + D V+ + VL
Sbjct: 164 MDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG--QWDHVSYVAVL 221
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
CA + G ++H + + + ++L+ MY KC A VF+ +PEK++V
Sbjct: 222 GHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIV 281
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF--LD 258
SW+A+++ N DA++ F M+ GV P++ T+ L++C+ + G
Sbjct: 282 SWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACT 341
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ +G+LP + ++++ ++G ++ A ++ SM + D W +++ H
Sbjct: 342 MKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSIIIGYAHHGRA 397
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE----LREFMNEKGLQTTPG 372
+ L A+E YV + + S+ V E L M E G++ PG
Sbjct: 398 REAMEAFHDM--LFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK--PG 451
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 39/297 (13%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G +HARV+R + D L+ LY + A ++FD +P R+ V+ N+L+S Y
Sbjct: 35 GKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ R RDAL L L + G ++ + A AH+ + + G + H Y + G
Sbjct: 94 SGRHRDALAL---LRVADFGL--NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+C++++ MY +C + A +VF + +V ++++MI+G G + +M R
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMM----------------------------FLDRM 260
D ++ VL C+ V G F
Sbjct: 209 VGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEA 268
Query: 261 SKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
++ F +LP NI + ++ + L + A QL M GV+P+ + L +C
Sbjct: 269 NRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + E+ LF M + + N F + A+ C +L G + A ++ G
Sbjct: 286 IMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTG 345
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF- 119
+ + LM++YS +A ++F +P RD V+WN +I Y + R R+A+ F
Sbjct: 346 HWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFH 405
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMY 178
D L EE P VT + VL ACA LG ++ G ++ + E G ++ +
Sbjct: 406 DMLFAEEV---PSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLL 462
Query: 179 SKCGSLGMAFEVFK-GMPEKDVVSWSAMIS 207
+ G L A + DVV+W +++S
Sbjct: 463 CRVGRLDEAERFIESNCIGTDVVAWRSLLS 492
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 46/259 (17%)
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G L G+ +H + + N+LIA+Y KCG LG+A +VF MP ++ VS + ++
Sbjct: 30 GELSLGKAVHARVVRAARFDVVQY-NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 207 SGLAMNGHGRDA-----IESFGAMQ---------------------------RAGVFPDD 234
SG A +G RDA + FG + +AG+
Sbjct: 89 SGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+ VL C +DE + D +S N+ + +++ G +D + ++
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSS-----FNVFAFNSMINGFLDRGQMDGSTSIVR 203
Query: 295 SMGV---KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDYV--LLLNLYSS 348
SM + D + +LG C K V LG +V H LK + E YV L+++Y
Sbjct: 204 SMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQV--HTQALKRRLELNVYVGSALVDMYGK 261
Query: 349 VGDWEKVKELREFMNEKGL 367
+ + E + EK +
Sbjct: 262 CDFPHEANRVFEVLPEKNI 280
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/485 (40%), Positives = 280/485 (57%), Gaps = 2/485 (0%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+R+K + N + S + C L G Q+H V++ G + +M +LMD+Y
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF 397
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
E KLF + RD V WNVL+ +++N + +A F + RE G PD+ + VL
Sbjct: 398 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE--GILPDEASFSTVL 455
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+ A L AL G IH I + GY M + SLI MY+KCGSL A++VF+G+ + +V+
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 515
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW+AMIS ++G IE F M G+ P TF VLSACSH G V+EG+ + M
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
K + P HY C+VDLLGRAG LD+A + I SM +KP ++W LLGACR + ++ +
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635
Query: 321 GERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKG 380
G E L E++ G+YVLL N+ + G E+ E+R M G++ PGCS I +K
Sbjct: 636 GREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKN 695
Query: 381 VVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEK 440
+ F D SH +EIY+ML+++ K +K GYVAE ++L E+ L YHSEK
Sbjct: 696 MTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEK 755
Query: 441 LAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCS 500
LA+AFG+L P + IR+ KNLR C CH K+ S +++RE+I+RD RFH F +G CS
Sbjct: 756 LALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCS 815
Query: 501 CNDYW 505
C DYW
Sbjct: 816 CGDYW 820
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 176/344 (51%), Gaps = 6/344 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ LF +MR N F S + ++ G Q+H+ + + G+ + + T L+
Sbjct: 228 QALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALV 287
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ A ++FD++P+R+ V+WN +I + N A+ +F ++ RE++ P+
Sbjct: 288 DMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT-VIPN 346
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+V+ VL ACA++G L FG ++H + ++G + NSL+ MY KC ++F+
Sbjct: 347 EVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQ 406
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+ ++DVV+W+ ++ G N +A F M+R G+ PD+ +F+ VL + + + +
Sbjct: 407 CVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQ 466
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI-WRTLLGA 311
G D++ K G + N+ G ++ + + G L AYQ+ G++ + I W ++ A
Sbjct: 467 GTAIHDQIIK-LGYVKNMCILGSLITMYAKCGSLVDAYQVFE--GIEDHNVISWTAMISA 523
Query: 312 CRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVGDWEK 354
++H + EH++ + S +V +L+ S G E+
Sbjct: 524 YQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 567
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVL 102
SL QIH +++ + Y L L++LY+ +A LF + V W L
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
I+ AL LF+ + SG P+ T +L A A + G+++H I +H
Sbjct: 217 ITHLSHFNMHLQALSLFNQM--RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKH 274
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G+ + + + +L+ MY+KC + A VF MPE+++VSW++MI G N A+ F
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 334
Query: 223 -GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
++ V P++ + + VLSAC++ G ++ G + K +G++P + ++D+
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK-YGLVPLTYVMNSLMDMYF 393
Query: 282 RAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ D+ +L +G + D W L+
Sbjct: 394 KCRFFDEGVKLFQCVGDR-DVVTWNVLV 420
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V + + EE F MR++ I + + S + +L G IH ++++ G
Sbjct: 419 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 478
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + ++ +L+ +Y+ +A ++F+ I + ++W +IS Y + + LF+
Sbjct: 479 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFE 538
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-------EKIHRYISEHGYGSKMNLCNS 173
++ E G +P VT + VL AC+H G +E G +KIH + G + C
Sbjct: 539 HMLSE--GIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH----DMNPGPEHYAC-- 590
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGH---GRDAIESFGAMQ 226
++ + + G L A + MP K S W A++ G+ GR+A E M+
Sbjct: 591 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME 647
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-- 196
+L +L+ +IH I + Y S L N+LI +Y+KCG L A +F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
K +V+W+++I+ L+ A+ F M+ +G +P+ TF+ +LSA + +V G
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQ- 266
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLL 309
L + G NI +VD+ + + A ++ M P+ + W +++
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM---PERNLVSWNSMI 318
>gi|218186365|gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indica Group]
Length = 960
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/450 (40%), Positives = 273/450 (60%), Gaps = 9/450 (2%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC------ 117
D L L+ +++ + ++FD I D AWN L+S Y R RD C
Sbjct: 512 DRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYAR-LCARDVACATSAAD 570
Query: 118 -LFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ + R S +P+++T + V+ AC LGA+ G H Y + + +L+
Sbjct: 571 AILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALV 630
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+ CG L +A +VF + ++D ++AM+ GLA++GHGR A+ M AGV D
Sbjct: 631 EMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGV 690
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T V+ AC+H GLVDEG+ + DRM +FGI P I HYGC++D+L RAG L+ A +LI
Sbjct: 691 TVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGQLNNAEKLIHE 750
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M + P++ I+R+L+ AC IH + LGE++I L+ L+ +SG++VL+ N Y+ WE
Sbjct: 751 MLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDA 810
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
K+ R+ M G+ PG S + + GV+HEF+V D +HP EIY M++EI +L G
Sbjct: 811 KKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRR 870
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ +S L ++ E+K + LSYHSE+LAIAF ++A+ PG IR+ KNLR+C DCH AK++
Sbjct: 871 SSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLV 930
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S VY RE+++RDR RFHHFR+G CSC D+W
Sbjct: 931 SRVYGREIVMRDRTRFHHFRDGVCSCGDFW 960
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 3/188 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
+S+ + LF +M I N I C + ++ G+ H ++ ++ +
Sbjct: 566 TSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIV 625
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T L+++Y+ + A ++F + RDT +N ++ + R AL L D ++ +
Sbjct: 626 ATALVEMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRAALSLLDRMH--GA 683
Query: 128 GCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
G D VT L V+ ACAH G ++ G + R E G ++ +I M S+ G L
Sbjct: 684 GVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGQLNN 743
Query: 187 AFEVFKGM 194
A ++ M
Sbjct: 744 AEKLIHEM 751
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG-------- 208
+++ H L +L+ ++++CG + VF + D+ +W+A++S
Sbjct: 502 KFLGAHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLCARD 561
Query: 209 LAMNGHGRDAI-ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
+A DAI E F M + P++ T V+ AC G V G ++ + +
Sbjct: 562 VACATSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHG-VWAHTYAVKRRLA 620
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
N +V++ G LD A Q+ ++ + D+ + +L +H H
Sbjct: 621 VNCIVATALVEMYAGCGRLDLAEQVFAAVSDR-DTRCYNAMLHGLAVHGH 669
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/469 (38%), Positives = 285/469 (60%), Gaps = 2/469 (0%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
+ C +L G +H V++ G ++++ +L+++Y A +LF+E+P R
Sbjct: 228 VSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSL 287
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+WN ++ + N + LF+ + R +G PD T + +L+AC G E IH
Sbjct: 288 VSWNSMVVIHNHNGYAEKGMDLFNLMKR--AGINPDQATMVALLRACTDTGLGRQAESIH 345
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
YI G+ + + + +L+ +Y+K G L + ++F+ + ++D ++W+AM++G A++ GR
Sbjct: 346 AYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGR 405
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
+AI+ F M + GV D TFT +LSACSH GLV+EG + + MS+ + + P + HY C+
Sbjct: 406 EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCM 465
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
VDLLGR+G L+ AY+LI SM ++P S +W LLGACR++ +V LG+ V E L+ L +
Sbjct: 466 VDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDH 525
Query: 337 GDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRIN 396
+Y++L N+YS+ G W ++R M E+ L PGCS I +H FVV D HPR +
Sbjct: 526 RNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSD 585
Query: 397 EIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTI 456
EI+ L+E+ ++++ AG + LH++ E K + ++ HSEKLAIAFG+L T G +
Sbjct: 586 EIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPL 645
Query: 457 RVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ KNLRIC DCH+ AK S + R +IIRD RFHHF +G CSC DYW
Sbjct: 646 IITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 19/337 (5%)
Query: 35 FAIKCC--MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
FAI C + +CS IHARV++ D + L+ +Y +A +LFDE+P
Sbjct: 127 FAISSCTSVSYCS-----AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMP 181
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+D V+WN L+S L F + R ESG +P++VT L V+ ACA +GAL+ G
Sbjct: 182 NKDLVSWNSLMSGLSGRGYLGACLNAFCRM-RTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+ +H + + G K + NSLI MY K G L A ++F+ MP + +VSW++M+ N
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 300
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G+ ++ F M+RAG+ PD T +L AC+ GL + + + G +I
Sbjct: 301 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR-CGFNADIII 359
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+++L + G L+ + + + + D W +L +H G I+ L +L
Sbjct: 360 ATALLNLYAKLGRLNASEDIFEEIKDR-DRIAWTAMLAGYAVH---ACGREAIK-LFDLM 414
Query: 333 AQESGD-----YVLLLNLYSSVGDWEKVKELREFMNE 364
+E + + LL+ S G E+ K+ E M+E
Sbjct: 415 VKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 451
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 292/515 (56%), Gaps = 39/515 (7%)
Query: 24 KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY-------- 75
K +P + C ++ C + + H R++R GY +S + +L+ Y
Sbjct: 6 KILPDHQLFCDL-LEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNL 64
Query: 76 ----------------------STFEKSFE---ACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+F + E A K+F ++P RD V WN +I Y+RN
Sbjct: 65 AYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNG 124
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+ +AL F + S +PD T V+ ACA LGAL + +H + + L
Sbjct: 125 KFEEALRSFQAM--LSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFIL 182
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
++LI MYSKCG + A EVF+ + DV W+++I+GLA++G DA+ F M+ V
Sbjct: 183 SSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENV 242
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD TF G+L ACSHCGLV EG + D M + I P + HYG +VDLLGRAGLLD+AY
Sbjct: 243 LPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAY 302
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
+IT+M ++PD +WR LL ACR H++ LGE + + + +SGDYVLL N+Y S
Sbjct: 303 AMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVAN---ISGPKSGDYVLLSNIYCSQN 359
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
W+ +E+RE M E+G++ G S + VVH F D SHP +Y++L+ + ++ K
Sbjct: 360 RWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTK 419
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
+ G+V + ++ EEK L +HSEKLA+A+G+L T PGT IR+ KNLRIC DCHN
Sbjct: 420 LEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHN 479
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ K++SG+ +R +IIRDR+RFH F G CSC DYW
Sbjct: 480 WIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + EE F+ M + + F + I C + +L +H +++
Sbjct: 116 MIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKR 175
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ L + L+D+YS + A ++F+ + + D WN LI+ + DA+ +F
Sbjct: 176 IEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFS 235
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL--CNSLIAMY 178
+ E PD +T L +L+AC+H G ++ G K + E+ Y K L +++ +
Sbjct: 236 KM--EAENVLPDSLTFLGILKACSHCGLVKEGRKYFD-LMENYYSIKPQLEHYGAMVDLL 292
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A+ + MP E DV+ W ++S
Sbjct: 293 GRAGLLDEAYAMITAMPMEPDVIVWRILLSA 323
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 291/536 (54%), Gaps = 42/536 (7%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG-GLQIHARVLRDGYQLDSQ 66
S ++G LF KM+ + ++ + + G + H VLR+G+ D
Sbjct: 602 SEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVY 661
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ T+L+D+Y A +FD + R+ AWN L+S Y DAL L + + +E
Sbjct: 662 VGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE- 720
Query: 127 SGCKPD-------------------------------------DVTCLLVLQACAHLGAL 149
G KPD +TCLL +ACA L L
Sbjct: 721 -GIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLL--RACASLSLL 777
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ G++IH +G+ + + +LI MYSK SL A +VF+ + K + SW+ MI G
Sbjct: 778 QKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGF 837
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
A+ G G++AI F MQ+ GV PD TFT +LSAC + GL+ EG + D M D+ I+P
Sbjct: 838 AIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPR 897
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ HY C+VDLLGRAG LD+A+ LI +M +KPD+TIW LLG+CRIHK++ E ++L
Sbjct: 898 LEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLF 957
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
+L+ S +Y+L++NLYS WE + LRE M G++ S I + VH F D+
Sbjct: 958 KLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDE 1017
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
HP +IY L ++ ++K GYV ++ N+ EK L H+EKLAI +G++
Sbjct: 1018 KPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIK 1077
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G IRV KN RIC DCH+ AK +S V RE+ +RD +RFHHFREG+CSCND+W
Sbjct: 1078 MKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 143/277 (51%), Gaps = 4/277 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
+F+++ K + + S A+K C + + G++IH +++ G+ LD L LM+ Y
Sbjct: 510 VFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYG 569
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A ++F E+P + + WN I +++++ + + LF + + S K + T
Sbjct: 570 RCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM--QFSFLKAETATI 627
Query: 137 LLVLQAC-AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ VLQA + LG L G++ H Y+ +G+ + + SLI MY K SL A VF M
Sbjct: 628 VRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 687
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+++ +W++++SG + G DA+ M++ G+ PD T+ G++S + G E +
Sbjct: 688 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALA 747
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
F +M ++ G++PN C++ LL + ++
Sbjct: 748 FFAQMQQE-GVMPNSASITCLLRACASLSLLQKGKEI 783
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+M +E F +M+Q+ + N + + ++ C L G +IH +R+G
Sbjct: 732 MISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 791
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+D+YS A K+F I + +WN +I + ++A+ +F+
Sbjct: 792 FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFN 851
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ ++ G PD +T +L AC + G + G K I+++ ++ ++ +
Sbjct: 852 EM--QKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 909
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMI 206
+ G L A+++ MP K D W A++
Sbjct: 910 RAGYLDEAWDLIHTMPLKPDATIWGALL 937
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/457 (39%), Positives = 280/457 (61%), Gaps = 2/457 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+H + L+ +L+ + + L+D+Y + EA ++F+ +P+++ V+W +++ Y +
Sbjct: 202 GSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQ 261
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N+ DAL LF L+ E G +P++ T + L +CA L L+ G + + G+ +
Sbjct: 262 NELFEDALQLF--LDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLL 319
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+CN+L+ MYSK GS+ A VF MP +DVVSW+++I G A +G R+A+E+F M A
Sbjct: 320 PVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFA 379
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
P TF GVLSAC+ GLVDEG +L+ M K+ G+ P HY C+V LL R G LD+
Sbjct: 380 EEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDE 439
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
A + I S + D WR+LL +C+++++ LG RV E + +LK ++ G YVLL N+Y+
Sbjct: 440 AERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAK 499
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
W+ V ++R M E G++ PG S I + VH F +D HP + +I + L E+ +
Sbjct: 500 ANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDK 559
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K+ GYV I LH++ E+K L YHSEKLA+AFG++ TP G IR+ KN+RIC DC
Sbjct: 560 IKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDC 619
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
H K++S R +++RD +RFH +G CSC+DYW
Sbjct: 620 HVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + E+ LF M + + N F + A+ C +L G + A ++ G
Sbjct: 255 IMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTG 314
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF- 119
+ + LM++YS +A ++F +P RD V+WN +I Y + R R+A+ F
Sbjct: 315 HWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFH 374
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMY 178
D L EE P VT + VL ACA LG ++ G ++ + E G ++ +
Sbjct: 375 DMLFAEEV---PSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLL 431
Query: 179 SKCGSLGMAFEVFKG-MPEKDVVSWSAMIS 207
+ G L A + DVV+W +++S
Sbjct: 432 CRVGRLDEAERFIESNCIGTDVVAWRSLLS 461
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 14/240 (5%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL CA + G ++H + + + ++L+ MY KC A VF+ +PEK+
Sbjct: 189 VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKN 248
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF-- 256
+VSW+A+++ N DA++ F M+ GV P++ T+ L++C+ + G
Sbjct: 249 IVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGA 308
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
+ +G+LP + ++++ ++G ++ A ++ SM + D W +++ H
Sbjct: 309 CTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSIIIGYAHHG 364
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE----LREFMNEKGLQTTPG 372
+ L A+E YV + + S+ V E L M E G++ PG
Sbjct: 365 RAREAMEAFHDM--LFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK--PG 420
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G L G+ +H + + N+LIA+Y KCG LG+A +VF MP ++ VS + ++
Sbjct: 30 GELSLGKAVHARVVRAARFDVVQY-NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFP-DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
SG A +G RDA+ A+ R F ++ + ++A +H D G R +
Sbjct: 89 SGYASSGRHRDAL----ALLRVADFGLNEYVLSSAVAATAHVRSYDMG-----RQCHGYA 139
Query: 266 ILPNI--HHYGC--VVDLLGRAGLLDQAYQLITSMGVK---PDSTIWRTLLGACRIHKHV 318
I + H Y C V+ + + +D+A + G K S + +LG C K V
Sbjct: 140 IKAGLAEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEV 199
Query: 319 TLGERVIEHLIELKAQ-ESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGL 367
LG +V H LK + E YV L+++Y + + E + EK +
Sbjct: 200 VLGSQV--HTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNI 249
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 116/273 (42%), Gaps = 22/273 (8%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G +HARV+R + D L+ LY + A ++FD +P R+ V+ N+L+S Y
Sbjct: 35 GKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ R RDAL L L + G ++ + A AH+ + + G + H Y + G
Sbjct: 94 SGRHRDALAL---LRVADFGL--NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+C++++ MY +C + A + K EK S +I + GH E Q
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVL--GHCASTKEVVLGSQ-- 204
Query: 229 GVFPDDQTFTGVLSACSHCG--LVD--EGMMFLDRMSKDFGILP--NIHHYGCVVDLLGR 282
Q L + G LVD F ++ F +LP NI + ++ +
Sbjct: 205 ---VHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQ 261
Query: 283 AGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
L + A QL M GV+P+ + L +C
Sbjct: 262 NELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 294
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/482 (39%), Positives = 272/482 (56%), Gaps = 17/482 (3%)
Query: 26 IP-TNPFACSFAIKCCMK-FCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE 83
IP ++PF + CC++ FC ++ G L + T L +YS +
Sbjct: 312 IPVSSPFG-HLHLACCIQGFC------------VKSGTILQPSVSTALTTIYSRLNEIDL 358
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDE ++ AWN +IS Y ++ T A+ LF + E P+ VT +L AC
Sbjct: 359 ARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTE--FTPNPVTITSILSAC 416
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LGAL FG+ +H+ I + + +LI MY+KCG++ A ++F EK+ V+W+
Sbjct: 417 AQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWN 476
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
MI G ++G+G +A++ F M G P TF VL ACSH GLV EG M
Sbjct: 477 TMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNK 536
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ I P HY C+VD+LGRAG L++A + I M V+P +W TLLGAC IHK L
Sbjct: 537 YRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARV 596
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
E L EL G YVLL N+YS ++ K +RE + ++ L TPGC+ I + G H
Sbjct: 597 ASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPH 656
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
FV D SH + IY L+E+ +++ GY +E + LH++ EEK + HSEKLAI
Sbjct: 657 VFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAI 716
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
AFG++ T PGT IR+ KNLR+C+DCH K +S + R +++RD RFHHF++G CSC D
Sbjct: 717 AFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGD 776
Query: 504 YW 505
YW
Sbjct: 777 YW 778
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G+ I L+ G+ D ++T L+ ++S E A LF I + D V++N LIS +
Sbjct: 223 GMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSC 282
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N T A+ F L SG + T + ++ + G L I + + G +
Sbjct: 283 NGETECAVKYFREL--LVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQP 340
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
++ +L +YS+ + +A ++F EK V +W+AMISG A +G AI F M
Sbjct: 341 SVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTT 400
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
P+ T T +LSAC+ G + G + ++ K + NI+ ++D+ + G + +
Sbjct: 401 EFTPNPVTITSILSACAQLGALSFGKS-VHQLIKSKNLEQNIYVSTALIDMYAKCGNISE 459
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
A QL + + ++ W T++ +H + ++ ++ L Q S
Sbjct: 460 ASQLF-DLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPS 506
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 176/419 (42%), Gaps = 30/419 (7%)
Query: 42 KFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNV 101
K C+ + HA+++R+GYQ D +T L + A LF +P+ D +NV
Sbjct: 17 KACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNV 76
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
LI + + ++ + +L + + PD+ T + A G +H +
Sbjct: 77 LIKGFSFSPDA-SSISFYTHLLKNTT-LSPDNFTYAFAISASPDDN---LGMCLHAHAVV 131
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
G+ S + + ++L+ +Y K + A +VF MP++D V W+ MI+GL N D+++
Sbjct: 132 DGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQV 191
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
F M GV D T VL A + V GM + ++ G + + ++ +
Sbjct: 192 FKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMG-IQCLALKLGFHFDDYVLTGLISVFS 250
Query: 282 RAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI-EHLIELKAQESGDYV 340
+ +D A +L+ M KPD + L+ + + E L+ + S V
Sbjct: 251 KCEDVDTA-RLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMV 309
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEI-- 398
L+ + S G ++ F + G P ST L + + R+NEI
Sbjct: 310 GLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVST-ALTTI----------YSRLNEIDL 358
Query: 399 -YQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTI 456
Q+ DE +++ +A + A I+ + G E A+S E + F TP TI
Sbjct: 359 ARQLFDESSEK-TVAAWNAMISGYAQS-GLTEM--AISLFQEMMTTEF----TPNPVTI 409
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S E LF++M NP + + C + +L G +H +
Sbjct: 377 MISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKN 436
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + T L+D+Y+ EA +LFD +++TV WN +I Y + +AL LF+
Sbjct: 437 LEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFN 496
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI-HRYISEHGYGSKMNLCNSLIAMYS 179
+ G +P VT L VL AC+H G + G++I H ++++ ++ +
Sbjct: 497 EM--LHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILG 554
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G L A E + MP E W ++
Sbjct: 555 RAGQLEKALEFIRKMPVEPGPAVWGTLL 582
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 299/526 (56%), Gaps = 35/526 (6%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+G LF +M I N S + C + L G ++H +LR+ + + + + L+
Sbjct: 161 QGILLFREMGLNGIRANSLTVSSILPACADYIKL--GREVHGFILRNEMEGNVYVSSALV 218
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE------- 125
++Y++ +A +FD + RD V+WNV+++ Y N+ L LF + +E
Sbjct: 219 NMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQA 278
Query: 126 --------------------------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+SG KP+ +T + L C +L +L G++IH Y+
Sbjct: 279 SWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYV 338
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
H + + + +L+ +Y+KCG L ++ VF MP KDVV+W+ MI +M+G G +++
Sbjct: 339 FRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESL 398
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M +GV P+ TF GVLS CSH L DEG++ + MS + I P+ HY C+VD+
Sbjct: 399 ILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDV 458
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
L RAG L++AY I M ++P + W LLGACR++K+V LG L E++ +G+Y
Sbjct: 459 LSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNY 518
Query: 340 VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY 399
VLL N+ + W + E+R+ M +KGL TPG S + +K V+ FV D S+ + + IY
Sbjct: 519 VLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIY 578
Query: 400 QMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVA 459
+ LDEI++++++ GY L N+ E++ L HSE+LA+AFG+L + TT+RV
Sbjct: 579 RFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVF 638
Query: 460 KNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KNLRIC DCHN K+++ + ++I+RD LRFHHFR+G C+CND+W
Sbjct: 639 KNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ P++ ++ + + + + F K C L+ +IH ++ G
Sbjct: 48 LISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFG 107
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L L+D++ + A +FD++ +D V+W + CY+ R + LF
Sbjct: 108 FNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFR 167
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G + + +T +L ACA ++ G ++H +I + + + ++L+ MY+
Sbjct: 168 EMGL--NGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYAS 223
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
L A VF M +D+VSW+ M++ +N + F M++ G+ + ++
Sbjct: 224 SLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAA 283
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPN 269
+S C G + + L +M +D GI PN
Sbjct: 284 ISGCMQNGQHELALGILCKM-QDSGIKPN 311
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 12/241 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD+IP+ D W +LIS + ++ + A+ ++ L +PD L V +AC
Sbjct: 30 ALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTL--LSRNVRPDKFVLLSVAKAC 87
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A G L +KIH + G+ + L N+LI M+ KC + A VF M KDVVSW+
Sbjct: 88 AASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWT 147
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS---HCGLVDEGMMFLDRM 260
+M G R I F M G+ + T + +L AC+ G G + + M
Sbjct: 148 SMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLGREVHGFILRNEM 207
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
N++ +V++ + L QA + SM D W +L A ++K
Sbjct: 208 EG------NVYVSSALVNMYASSLGLKQARLVFDSM-YHRDIVSWNVMLTAYFLNKEYER 260
Query: 321 G 321
G
Sbjct: 261 G 261
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
LI G L A +F +PE D+ +W+ +ISG +G + AI+ + + V PD
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 234 DQTFTGVLSACSHCG-LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
V AC+ G LV + D + FG ++ ++D+ G+ ++ A +
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQ--FGFNKDLVLGNALIDMFGKCKFVNGARCV 134
Query: 293 ITSMGVKPDSTIWRTLL------GACR 313
M VK D W ++ G CR
Sbjct: 135 FDDMVVK-DVVSWTSMTYCYVNCGMCR 160
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/507 (39%), Positives = 296/507 (58%), Gaps = 12/507 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
MV S S + EE +F M + + N FA CS G + R+
Sbjct: 117 MVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFA-------CS--GDMSTAEEWFRN 167
Query: 60 GYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+ D+ L T ++ Y +A K F+ +P R+ V+WN +++ Y++N DAL L
Sbjct: 168 APEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRL 227
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + RE + +P+ T VL C++L AL FG++IH++ + + + SL++MY
Sbjct: 228 FRTMVRE-ANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMY 286
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCG L A +F M +DVV+W+AMISG A +G G++AI F M+ GV P+ TF
Sbjct: 287 CKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFV 346
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL+AC H GL D G+ + M + +GI P + HY C+VDLL RAG L++A I SM
Sbjct: 347 VVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPF 406
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + + TLL ACR++K++ E LIE Q +G YV L N+Y+ W+ V +
Sbjct: 407 EPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRV 466
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R +M + + TPG S I +KGV+HEF +D HP++ I++ L ++ +++K GYV ++
Sbjct: 467 RRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDL 526
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ K L HSEKLAIAFG+++T G T+R+ KNLR+C DCHN AKV+S +
Sbjct: 527 DFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHNAAKVISMI 586
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD RFHHFR G CSC+DYW
Sbjct: 587 EDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL-------------NREESGC 129
+A LFD IP D V++N L+ C+ + A LF ++ +SG
Sbjct: 67 DARHLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGA 126
Query: 130 KPDDVTCLLVLQ--------------ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ L + AC+ G + E+ R E L +++
Sbjct: 127 VEEAKVVFLAMPVRNSVSWNAMVSGFACS--GDMSTAEEWFRNAPEK---EDAVLWTAMV 181
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDD 234
+ Y G++ A + F+ MP +++VSW+A+++G N H DA+ F M R A V P+
Sbjct: 182 SGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNA 241
Query: 235 QTFTGVLSACSH 246
T + VL CS+
Sbjct: 242 STLSSVLLGCSN 253
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 23/249 (9%)
Query: 88 FDEIPQRDTVAWNVLISCYIRNQ-RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
F P++ T +N L++ Y R R DA LFD + PD V+ +L
Sbjct: 40 FVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIP------TPDVVSYNTLLLCHFAS 93
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G + ++ + S N++++ SK G++ A VF MP ++ VSW+AM+
Sbjct: 94 GDADGARRLFASMPVRDVAS----WNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMV 149
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A +G A E F + A D +T ++S G V + + + + M
Sbjct: 150 SGFACSGDMSTAEEWF---RNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMP----- 201
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIHKHVTLGE 322
+ N+ + VV + D A +L +M V+P+++ ++L C + G+
Sbjct: 202 VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGK 261
Query: 323 RVIEHLIEL 331
++ + ++L
Sbjct: 262 QIHQWCMKL 270
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 293/490 (59%), Gaps = 5/490 (1%)
Query: 18 FEKMRQK--RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLY 75
F +MR + R P N + C +L G +H V++ G ++++ +L+++Y
Sbjct: 151 FCRMRTESGRQP-NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMY 209
Query: 76 STFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVT 135
A +LF+E+P R V+WN ++ + N + LF+ + R +G PD T
Sbjct: 210 GKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR--AGINPDQAT 267
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ +L+AC G E IH YI G+ + + + +L+ +Y+K G L + ++F+ +
Sbjct: 268 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 327
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D ++W+AM++G A++ GR+AI+ F M + GV D TFT +LSACSH GLV+EG
Sbjct: 328 DRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 387
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + MS+ + + P + HY C+VDLLGR+G L+ AY+LI SM ++P S +W LLGACR++
Sbjct: 388 YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVY 447
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+V LG+ V E L+ L + +Y++L N+YS+ G W ++R M E+ L PGCS
Sbjct: 448 GNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSF 507
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +H FVV D HPR +EI+ L+E+ ++++ AG + LH++ E K + ++
Sbjct: 508 IEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMIN 567
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLAIAFG+L T G + + KNLRIC DCH+ AK S + R +IIRD RFHHF
Sbjct: 568 KHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFA 627
Query: 496 EGRCSCNDYW 505
+G CSC DYW
Sbjct: 628 DGLCSCRDYW 637
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 19/337 (5%)
Query: 35 FAIKCC--MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
FAI C + +CS IHARV++ D + L+ +Y +A +LFDE+P
Sbjct: 70 FAISSCTSVSYCS-----AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMP 124
Query: 93 QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+D V+WN L+S L F + R ESG +P++VT L V+ ACA +GAL+ G
Sbjct: 125 NKDLVSWNSLMSGLSGRGYLGACLNAFCRM-RTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+ +H + + G K + NSLI MY K G L A ++F+ MP + +VSW++M+ N
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHH 272
G+ ++ F M+RAG+ PD T +L AC+ GL + + + G +I
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR-CGFNADIII 302
Query: 273 YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
+++L + G L+ + + + + D W +L +H G I+ L +L
Sbjct: 303 ATALLNLYAKLGRLNASEDIFEEIKDR-DRIAWTAMLAGYAVH---ACGREAIK-LFDLM 357
Query: 333 AQESGD-----YVLLLNLYSSVGDWEKVKELREFMNE 364
+E + + LL+ S G E+ K+ E M+E
Sbjct: 358 VKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 394
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/485 (40%), Positives = 280/485 (57%), Gaps = 2/485 (0%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+R+K + N + S + C L G Q+H V++ G + +M +LMD+Y
Sbjct: 103 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRF 162
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
E KLF + RD V WNVL+ +++N + +A F + RE G PD+ + VL
Sbjct: 163 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE--GILPDEASFSTVL 220
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
+ A L AL G IH I + GY M + SLI MY+KCGSL A++VF+G+ + +V+
Sbjct: 221 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 280
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW+AMIS ++G IE F M G+ P TF VLSACSH G V+EG+ + M
Sbjct: 281 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 340
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
K + P HY C+VDLLGRAG LD+A + I SM +KP ++W LLGACR + ++ +
Sbjct: 341 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 400
Query: 321 GERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKG 380
G E L E++ G+YVLL N+ + G E+ E+R M G++ PGCS I +K
Sbjct: 401 GREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKN 460
Query: 381 VVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEK 440
+ F D SH +EIY+ML+++ K +K GYVAE ++L E+ L YHSEK
Sbjct: 461 MTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEK 520
Query: 441 LAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCS 500
LA+AFG+L P + IR+ KNLR C CH K+ S +++RE+I+RD RFH F +G CS
Sbjct: 521 LALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCS 580
Query: 501 CNDYW 505
C DYW
Sbjct: 581 CGDYW 585
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 169/328 (51%), Gaps = 6/328 (1%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N F S + ++ G Q+H+ + + G+ + + T L+D+Y+ A ++F
Sbjct: 9 NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 68
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D++P+R+ V+WN +I + N A+ +F ++ RE++ P++V+ VL ACA++G
Sbjct: 69 DQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT-VIPNEVSVSSVLSACANMGG 127
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L FG ++H + + G + NSL+ MY KC ++F+ + ++DVV+W+ ++ G
Sbjct: 128 LNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 187
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
N +A F M+R G+ PD+ +F+ VL + + + +G D++ K G +
Sbjct: 188 FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK-LGYVK 246
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI-WRTLLGACRIHKHVTLGERVIEH 327
N+ G ++ + + G L AYQ+ G++ + I W ++ A ++H + EH
Sbjct: 247 NMCILGSLITMYAKCGSLVDAYQVFE--GIEDHNVISWTAMISAYQLHGCANQVIELFEH 304
Query: 328 LIELKAQESG-DYVLLLNLYSSVGDWEK 354
++ + S +V +L+ S G E+
Sbjct: 305 MLSEGIEPSHVTFVCVLSACSHTGRVEE 332
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
SG P+ T +L A A + G+++H I +HG+ + + + +L+ MY+KC +
Sbjct: 4 SGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 63
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF-GAMQRAGVFPDDQTFTGVLSACS 245
A VF MPE+++VSW++MI G N A+ F ++ V P++ + + VLSAC+
Sbjct: 64 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+ G ++ G + K FG++P + ++D+ + D+ +L +G + D W
Sbjct: 124 NMGGLNFGRQVHGVVVK-FGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR-DVVTW 181
Query: 306 RTLL 309
L+
Sbjct: 182 NVLV 185
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V + + EE F MR++ I + + S + +L G IH ++++ G
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 243
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + ++ +L+ +Y+ +A ++F+ I + ++W +IS Y + + LF+
Sbjct: 244 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFE 303
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-------EKIHRYISEHGYGSKMNLCNS 173
++ E G +P VT + VL AC+H G +E G +KIH + G + C
Sbjct: 304 HMLSE--GIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH----DMNPGPEHYAC-- 355
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGH---GRDAIESFGAMQ 226
++ + + G L A + MP K S W A++ G+ GR+A E M+
Sbjct: 356 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME 412
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 288/509 (56%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT---NPFACSFAIKCCMKFCSLMGGLQIHARVL 57
MV Y PEE L+ M +R+P N F S A+ + G +IH ++
Sbjct: 188 MVTGYVKKDQPEEALVLYSLM--QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R G D L ++LMD+Y EA +FD+I ++D V+W +I Y ++ R R+
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 118 LFDNLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF L C +P++ T VL ACA L E G+++H Y++ G+ +SL+
Sbjct: 306 LFSEL---VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCG++ A V G P+ D+VSW+++I G A NG +A++ F + ++G PD T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VLSAC+H GLV++G+ F +++ + HY C+VDLL R+G +Q +I+ M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+KP +W ++LG C + ++ L E + L +++ + YV + N+Y++ G WE+
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R+ M E G+ PG S +K H F+ D SHP N+I + L E+ K++K GYV
Sbjct: 543 KMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ LH++ E+K L YHSEKLA+AF +L+T GT I+V KNLR CVDCH K +S
Sbjct: 603 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFIS 662
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R++ +RD RFH F G+CSC DYW
Sbjct: 663 NITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 36/357 (10%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS 81
R K+ P + + C+ I+ C + +L G ++H + G+ + L+ +Y+
Sbjct: 79 RAKKPPASTY-CNL-IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSL 136
Query: 82 FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES-------------- 127
+A K+FDE+P RD +WNV+++ Y +A LFD + ++S
Sbjct: 137 VDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKD 196
Query: 128 ----------------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
+P+ T + + A A + + G++IH +I G S L
Sbjct: 197 QPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLW 256
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+SL+ MY KCG + A +F + EKDVVSW++MI + R+ F + +
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P++ TF GVL+AC+ + G M++ G P +VD+ + G ++ A
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
++ KPD W +L+G C + + + L LK+ D+V +N+ S+
Sbjct: 376 VVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLL--LKSGTKPDHVTFVNVLSA 429
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/550 (36%), Positives = 297/550 (54%), Gaps = 45/550 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAI----------------------- 37
MV YS ++ LFEK+R+++I N S I
Sbjct: 322 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCG 381
Query: 38 ------------KCCMKFCSLMGGLQIHARVLRDGYQLDSQ-------LMTTLMDLYSTF 78
C +L+ G + H ++ LD ++ L+D+YS
Sbjct: 382 SEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC 441
Query: 79 EKSFEACKLFDEIPQRD--TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ A +FD IP +D V W VLI ++ +AL LF + + ++ P+ T
Sbjct: 442 KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 501
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKM-NLCNSLIAMYSKCGSLGMAFEVFKGMP 195
L ACA LGAL FG +IH Y+ + + S M + N LI MYSK G + A VF M
Sbjct: 502 SCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH 561
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+++ VSW+++++G M+G G +A++ F MQ+ + PD TF VL ACSH G+VD+G+
Sbjct: 562 QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGIN 621
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ + M+KDFG++P HY C+VDLL RAG LD+A +LI M +KP +W LL ACR++
Sbjct: 622 YFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVY 681
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+V LGE L+EL++ G Y LL N+Y++ W+ V +R M G++ PGCS
Sbjct: 682 ANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSW 741
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
+ + F D SHP +IY +L ++ +++K GYV + LH++ EEKG+ LS
Sbjct: 742 VQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLS 801
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLA+A+G+L T PG IR+ KNLR C DCH+ +S + E+I+RD RFHHF+
Sbjct: 802 EHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFK 861
Query: 496 EGRCSCNDYW 505
G CSC YW
Sbjct: 862 NGSCSCRGYW 871
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 135/252 (53%), Gaps = 4/252 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ L+ +M++ + + F +K C + S G +HA V G++ + + L
Sbjct: 127 EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGL 186
Query: 72 MDLYSTFEKSFEACKLFDEIPQR---DTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
+ +Y A ++FDE+ +R D V+WN +++ Y++ + A+ +F+ + E+ G
Sbjct: 187 VSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMT-EDLG 245
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD V+ + VL ACA +GA G+++H Y G + + N+++ MY+KCG + A
Sbjct: 246 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 305
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
+VF+ M KDVVSW+AM++G + G DA+ F ++ + + T++ V++ + G
Sbjct: 306 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 365
Query: 249 LVDEGMMFLDRM 260
L E + +M
Sbjct: 366 LGFEALDVFRQM 377
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 174 LIAMYSKCGSLGMAFEVFKGM--PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+I+MY S A V + + V W+ +I G D ++ + MQR G
Sbjct: 83 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142
Query: 232 PDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
PD TF VL AC CG ++F G N+ +V + GR G
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFAS------GFEWNVFVGNGLVSMYGRCGAW 196
Query: 287 DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
+ A Q+ M GV D W +++ A ++ E + E D V L+
Sbjct: 197 ENARQVFDEMRERGVG-DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP-DAVSLV 254
Query: 344 NLY---SSVGDWEKVKELREFMNEKGL 367
N+ +SVG W + K++ + GL
Sbjct: 255 NVLPACASVGAWSRGKQVHGYALRSGL 281
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 301/505 (59%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E +F +MR + + F S + C C + ++H ++
Sbjct: 135 MIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTS 194
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + T L+DLY+ +A ++F+ + + +V W+ +++ Y++++ +AL L+
Sbjct: 195 LDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYR 254
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
R + + T V+ AC++L AL G+++H I + G+GS + + +S + MY+K
Sbjct: 255 RAQR--MSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAK 312
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL ++ +F + EK++ W+ +ISG A + ++ + F MQ+ G+ P++ TF+ +
Sbjct: 313 CGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 372
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS C H GLV+EG F M +G+ PN+ HY C+VD+LGRAGLL +AY+LI S+ +P
Sbjct: 373 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEP 432
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++IW +LL +CR+ K++ L E + L EL+ + +G++VLL N+Y++ WE++ + R+
Sbjct: 433 TASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 492
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ + ++ G S I +K VH F V + SHPRI EI MLD + +L+ GY +
Sbjct: 493 LLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEH 552
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
ELH++ +K L HSEKLA+ FG++ P G+T+R+ KNLRICVDCH F K S
Sbjct: 553 ELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATR 612
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF +G CSC ++W
Sbjct: 613 RFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 22/375 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C + ++M H + +R Q D L L++ YS A ++FD + +R
Sbjct: 70 LQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSL 129
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC-AHLGALEFGEKI 155
V+WN +I Y RN+ +AL +F + E G K + T VL AC A+ ALE +K+
Sbjct: 130 VSWNTMIGLYTRNRMESEALDIFWEMRNE--GFKFSEFTISSVLSACGANCDALE-CKKL 186
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + + +L+ +Y+KCG + A +VF+ M +K V+WS+M++G + +
Sbjct: 187 HCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNY 246
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
+A+ + QR + + T + V+ ACS+ + EG + K G N+
Sbjct: 247 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKS-GFGSNVFVASS 305
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
VD+ + G L ++Y + + + K + +W T++ KH E +I L E K Q+
Sbjct: 306 AVDMYAKCGSLRESYIIFSEVQEK-NIELWNTIISG--FAKHARPKEVMI--LFE-KMQQ 359
Query: 336 SG---DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV-- 390
G + V +L S G V+E R F K ++TT G S VVH + D+
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFF--KLMRTTYGLSP----NVVHYSCMVDILG 413
Query: 391 SHPRINEIYQMLDEI 405
++E Y+++ I
Sbjct: 414 RAGLLSEAYELIKSI 428
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 91 IPQRDTVAW--NVLISCYIRNQRTRDA-----LCLFDNLNREE--SGCKPDDVTCLL--- 138
+P ++ + + N LI C I +R+ + + +F + +EE G D+ +
Sbjct: 6 LPSKNILGFTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASD 65
Query: 139 ---VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+LQ CA GA+ + H + L N LI YSKCG + +A +VF GM
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC-SHCGLVDEGM 254
E+ +VSW+ MI N +A++ F M+ G + T + VLSAC ++C ++
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ M + N++ ++DL + G+++ A Q+ SM K S W +++
Sbjct: 186 LHCLSMKTSLDL--NLYVGTALLDLYAKCGMINDAVQVFESMQDK-SSVTWSSMVA 238
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 283/457 (61%), Gaps = 2/457 (0%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G +H ++ G +L+ +++ +++Y F A KLF +P+++ V+WN +++ + +
Sbjct: 172 GWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQ 231
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
N +A+ F+ + +G PD+ T L +LQAC L E IH I G +
Sbjct: 232 NGIPNEAVNYFNMM--RVNGLFPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENI 289
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ +L+ +YSK G L ++ +VF + + D V+ +AM++G AM+GHG++AIE F R
Sbjct: 290 TIATTLLNLYSKLGRLNVSHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVRE 349
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
G+ PD TFT +LSACSH GLV +G + MS + + P + HY C+VDLLGR G+L+
Sbjct: 350 GMKPDHVTFTHLLSACSHSGLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLND 409
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
AY+LI SM ++P+S +W LLGACR+++++ LG+ E+LI L + +Y++L N+YS+
Sbjct: 410 AYRLIKSMPLEPNSGVWGALLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSA 469
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
G W ++R M K GCS I +H FVVDD SHP ++I++ L+EI ++
Sbjct: 470 AGLWSDASKVRALMKTKVFIRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRK 529
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+K G+V+E S LH++ E K + ++ HSEK+A+AFG+L + + + KNLRIC+DC
Sbjct: 530 IKEVGFVSETESILHDVDEEVKTDMINKHSEKIALAFGLLVSNADMPLVIIKNLRICLDC 589
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
HN AK +S + R +IIRD RFHHF +G CSC DYW
Sbjct: 590 HNTAKFVSLIEKRTIIIRDSKRFHHFSDGLCSCADYW 626
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 52 IHARVL-----RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY 106
IHARV+ RDG+ + QL++ +++ ST + A KLFDE+P +D+++WN L+S +
Sbjct: 73 IHARVIKSLDYRDGF-IGDQLVSCYLNMGSTPD----AQKLFDEMPHKDSISWNSLVSGF 127
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
R + L +F + R E + +++T L V+ ACA A + G +H + G
Sbjct: 128 SRIGDLGNCLRVFYTM-RYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMEL 186
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
++ + N+ I MY K G + AF++F +PE+++VSW++M++ NG +A+ F M+
Sbjct: 187 EVKVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMR 246
Query: 227 RAGVFPDDQTFTGVLSACSHCGL-----VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
G+FPD+ T +L AC L G++F G+ NI +++L
Sbjct: 247 VNGLFPDEATILSLLQACEKLPLGRLVEAIHGVIF------TCGLNENITIATTLLNLYS 300
Query: 282 RAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ G L+ ++++ + KPD +L +H H G+ IE
Sbjct: 301 KLGRLNVSHKVFAEIS-KPDKVALTAMLAGYAMHGH---GKEAIE 341
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 285/505 (56%), Gaps = 8/505 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ +S + Y+F +M++ + + + C L G +H + ++ G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + + +Y +LFDE+P + + WN +IS Y +N D L L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG PD T + VL +CAHLGA + G ++ + + +G+ + + N+ I+MY++
Sbjct: 247 QM--KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L A VF MP K +VSW+AMI M+G G + F M + G+ PD F V
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GL D+G+ M +++ + P HY C+VDLLGRAG LD+A + I SM V+P
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEP 424
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D +W LLGAC+IHK+V + E +IE + G YVL+ N+YS + E + +R
Sbjct: 425 DGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E+ + PG S + KG VH F+ D SH + E+++MLDE+ V E+
Sbjct: 485 MMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETS------VMELAG 538
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ EE + HSE+LAIAFG+L + PGT I V KNLR+C DCH F K +S + +
Sbjct: 539 NMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVD 598
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R+ ++RD RFH+F++G CSC DYW
Sbjct: 599 RQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 180/374 (48%), Gaps = 8/374 (2%)
Query: 2 VRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
+R + S E L+ M + + F+ F +K C + G Q+H V + G
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD--TVAWNVLISCYIRNQRTRDALCLF 119
+ + ++T L+ +Y +A K+F+E PQ +V +N LIS Y N + DA +F
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +E+G D VT L ++ C L G +H + G S++ + NS I MY
Sbjct: 145 RRM--KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGS+ +F MP K +++W+A+ISG + NG D +E + M+ +GV PD T
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLS+C+H G G + ++ + G +PN+ + + R G L +A + M VK
Sbjct: 263 VLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD-YVLLLNLYSSVGDWEKVKEL 358
+ W ++G +H +G + + +I+ + G +V++L+ S G +K EL
Sbjct: 322 SLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 359 -REFMNEKGLQTTP 371
R E L+ P
Sbjct: 381 FRAMKREYKLEPGP 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 144/345 (41%), Gaps = 63/345 (18%)
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
+ WNV + +++ L+ ++ R SG PD + +L++CA L G+++
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLR--SGSSPDAFSFPFILKSCASLSLPVSGQQL 75
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS--WSAMISGLAMNG 213
H ++++ G ++ + +LI+MY KCG + A +VF+ P+ +S ++A+ISG N
Sbjct: 76 HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACS---------------------------- 245
DA F M+ GV D T G++ C+
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 246 -------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL---LDQAYQLITS 295
CG V+ G D M + + + V+ + GL + + Y+ + S
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMP-----VKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV-------LLLNLYSS 348
GV PD ++L +C LG + I H + K ES +V +++Y+
Sbjct: 251 SGVCPDPFTLVSVLSSC-----AHLGAKKIGHEVG-KLVESNGFVPNVFVSNASISMYAR 304
Query: 349 VGDWEKVKELREFMNEKGLQTTP---GCSTIGLKGVVHEFVVDDV 390
G+ K + + + M K L + GC + G + + DD+
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 292/507 (57%), Gaps = 7/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFA--IKCCMKFCSLMGGLQIHARVLR 58
M+ + E LF +MR++ P A +F + + +L ++H+ +
Sbjct: 407 MIGGVAQQKCGREALSLFLQMRREGF--FPDATTFVNILSANVGEEALEWVKEVHSYAID 464
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G +D ++ L+ +Y+ + A ++FD++ +R+ W V+IS ++ +A L
Sbjct: 465 AGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSL 523
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + RE G PD T + +L ACA GALE+ +++H + G S + + N+L+ MY
Sbjct: 524 FLQMLRE--GIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMY 581
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+KCGS+ A VF M E+DV SW+ MI GLA +G G DA++ F M+ G P+ +F
Sbjct: 582 AKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFV 641
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VLSACSH GLVDEG +++D+GI P + HY C+VDLLGRAG L++A I +M +
Sbjct: 642 AVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPI 701
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P W LLGAC + ++ + E + ++LK + + YVLL N+Y++ G+WE+ +
Sbjct: 702 EPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLV 761
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M +G++ PG S I + +H FVV D SHP EIY L ++ K+LK GYV +
Sbjct: 762 RSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDT 821
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
L N E K AL HSEKLAI +G++ TP IRV KNLR+C DCH K +S V
Sbjct: 822 RLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKV 881
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE++ RD RFHHF++G CSC DYW
Sbjct: 882 TGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 186/378 (49%), Gaps = 23/378 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E+ ++ +MR++ N +K C SL G +IHA +++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q D ++ T L+++Y +A +FD++ +R+ ++W V+I R ++A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G P+ T + +L A A GALE+ +++H + G + + N+L+ MY+K
Sbjct: 121 QMQRE--GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A VF GM E+D+ SW+ MI GLA +G G++A F M+R G P+ T+ +
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 241 L--SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
L SA + G + E + + + + G + ++ ++ + + G +D A + M
Sbjct: 239 LNASAITSTGAL-EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM-C 296
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEH---LIELKAQESG------DYVLLLNLYSSV 349
D W ++G L + H I LK Q+ G Y+ LLN + S
Sbjct: 297 DRDVISWNAMIGG--------LAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVST 348
Query: 350 GDWEKVKELREFMNEKGL 367
G WE VKE+ + E GL
Sbjct: 349 GAWEWVKEVHKHAVEVGL 366
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 184/362 (50%), Gaps = 13/362 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E F+ F +M+++ N + + +L ++H+ + G LD ++ L
Sbjct: 113 QEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNAL 172
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ +A +FD + +RD +W V+I ++ R ++A LF L E GC P
Sbjct: 173 VHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLF--LQMERGGCLP 230
Query: 132 DDVTCLLVLQACA--HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+ T L +L A A GALE+ +++H++ + G+ S + + N+LI MY+KCGS+ A
Sbjct: 231 NLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARL 290
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF GM ++DV+SW+AMI GLA NG G +A F MQ+ G PD T+ +L+ G
Sbjct: 291 VFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGA 350
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
E + + + + + G++ ++ V + R G +D A + + V+ + T W ++
Sbjct: 351 W-EWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMI 408
Query: 310 GACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSS-VGD--WEKVKELREFMNEK 365
G K G + ++++ + D +N+ S+ VG+ E VKE+ + +
Sbjct: 409 GGVAQQK---CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDA 465
Query: 366 GL 367
GL
Sbjct: 466 GL 467
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 294/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ +F KM R + + F + + C L G QIH+ ++
Sbjct: 249 MISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTT 308
Query: 60 GYQLDSQLMTTLMDLYS---------------------------------TFEKSFEACK 86
G+ + ++ L+ +YS EA
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKN 368
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD + RD VAW +I Y ++ +A+ LF ++ EE +P+ T +L + L
Sbjct: 369 IFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQ--RPNSYTLAAMLSVASSL 426
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAM 205
+L G++IH + G +++ N+LI MY+K GS+ A F + E+D VSW++M
Sbjct: 427 ASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSM 486
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I LA +GH +A+E F M G+ PD T+ GV SAC+H GLV++G + D M
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDK 546
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P + HY C+VDL GRAGLL +A + I M ++PD W +LL ACR++K++ LG+
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAA 606
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L+ L+ + SG Y L NLYS+ G WE+ ++R+ M + ++ G S I +K VH F
Sbjct: 607 ERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAF 666
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
V+D HP+ NEIY + +I ++K GYV + S LH+L E K L +HSEKLAIAF
Sbjct: 667 GVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAF 726
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+++TP TT+R+ KNLR+C DCH K +S + RE+I+RD RFHHF++G CSC DYW
Sbjct: 727 GLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 61/256 (23%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H RV++ G LM LM++YS + A KLFDE+P R +WN ++S Y +
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 112 TRDALCLFDNLNREES-----------------------------GCKPDDVTCLLVLQA 142
+ FD L + +S G +P T VL +
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC--------------------- 181
A LE G+K+H +I + G +++ NSL+ MY+KC
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215
Query: 182 ----------GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
G + +A F+ M E+D+V+W++MISG G+ A++ F M R +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSML 275
Query: 232 -PDDQTFTGVLSACSH 246
PD T VLSAC++
Sbjct: 276 SPDRFTLASVLSACAN 291
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 292/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y E LFE+M + I + + AI C +L G QIHA+ G
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+ LY+ + EA F++I ++ ++WN L+S ++ +AL +F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R E+ + + T + A A L ++ G++IH + + GY S+ + NSLI++Y+K
Sbjct: 655 RMLRTEA--EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAK 712
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A+ F M E++V+SW+AMI+G + +G G +A+ F M+ G+ P+ TF GV
Sbjct: 713 SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGV 772
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV EG+ + + M K ++P HY CVVDLLGRAG LD+A + I M +
Sbjct: 773 LSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPA 832
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ IWRTLL AC IHK++ +GER HL+EL+ ++S YVL+ N+Y+ W R+
Sbjct: 833 DAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRK 892
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G++ PG S I +K VH F D HP N+IY+ + +N++ GYV + S
Sbjct: 893 LMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFS 952
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L+ +K HSEKLAIAFG+L+ IRV KNLR+C DCHN+ K +S + N
Sbjct: 953 LLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISN 1012
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF G CSC D+W
Sbjct: 1013 RSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 4/293 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF KM++ + + + + C +L G+Q+H+ ++ G D L +L+DLYS
Sbjct: 349 LFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYS 408
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
A K F + V WNV++ Y + D+ +F + E G P+ T
Sbjct: 409 KCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQME--GMIPNQFTY 466
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+L+ C LGAL GE+IH ++ + G+ + +C+ LI MY+K G L +A + + +PE
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
DVVSW+AMI+G + +A++ F M+ G+ D+ F +SAC+ + +G
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ- 585
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ S G ++ ++ L R G + +AY +G K + + W +L+
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLV 637
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 133/228 (58%), Gaps = 2/228 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + + F +F +M+ + + N F ++ C +L G QIH V++ G
Sbjct: 434 MLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+QL+ + + L+D+Y+ + + A ++ +P+ D V+W +I+ Y+++ +AL LF+
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G + D++ + ACA + AL G++IH G+G+ +++ N+LI++Y++
Sbjct: 554 EM--EYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYAR 611
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
CG + A+ F+ + +K+ +SW++++SGLA +G+ +A++ F M R
Sbjct: 612 CGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRT 659
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 41/389 (10%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
M + L M ++ + +N + ++ C+ SL +++H R+ + G+ +
Sbjct: 35 MEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPL 94
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L+ +L+D Y A K+FDE R +WN +I ++ + CLF + E
Sbjct: 95 LIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAE- 153
Query: 127 SGCKPDDVTCLLVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
G P+ T VL+AC A + +++H +G+ S + N LI +YSK G +
Sbjct: 154 -GITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +VF + KD+V+W AMISGL+ NG +AI F M + +FP + VLSA +
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 246 -----------HCGLVD----------EGMMFLDRMSKDFGILPNIH---------HYGC 275
HC ++ G++ L S+ I Y
Sbjct: 273 KIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332
Query: 276 VVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELK 332
++ L + G D+A +L T M +KPD +LL AC + G ++ H I K
Sbjct: 333 LISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI--K 390
Query: 333 AQESGDYVL---LLNLYSSVGDWEKVKEL 358
A S D +L LL+LYS D E +
Sbjct: 391 AGMSADIILEGSLLDLYSKCADVETAHKF 419
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 17/318 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGG-------LQIH 53
M+ + S + F LF +M + I N + + +K C+ GG Q+H
Sbjct: 130 MIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV------GGDIAFNYVKQVH 183
Query: 54 ARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTR 113
+R G+ + L+DLYS A K+F+ I +D V W +IS +N
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 114 DALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS 173
+A+ LF +++ E P ++ VL A + E GE++H + + G+ S+ +CN
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSS--VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNG 301
Query: 174 LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
L+A+YS+ L A +F M +D VS++++ISGL G A+E F MQR + PD
Sbjct: 302 LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
T +LSAC+ G + +GM K G+ +I G ++DL + ++ A++
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 294 TSMGVKPDSTIWRTLLGA 311
+ + +W +L A
Sbjct: 421 LXTETE-NIVLWNVMLVA 437
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/528 (36%), Positives = 281/528 (53%), Gaps = 33/528 (6%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P++G +F +M + + + C L G IH +R G D +
Sbjct: 425 PQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNA 484
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE---- 126
L+ LY+ EA +FD IP R+ +WN +++ Y N+ L +F +NR+E
Sbjct: 485 LLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKAD 544
Query: 127 --------SGC---------------------KPDDVTCLLVLQACAHLGALEFGEKIHR 157
GC KPD+ T +L+AC+ L G++IH
Sbjct: 545 EITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHC 604
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
Y+ H + N+L+ MY+KCG L ++ VF MP KDV SW+ MI M+G+G++
Sbjct: 605 YVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKE 664
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+ F M + V PD TFT VLSACSH LV+EG+ + MS+D + P HY CVV
Sbjct: 665 ALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVV 724
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
D+ RAG L++AY I M ++P + W+ L CR++K+V L + + L E+ S
Sbjct: 725 DIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSA 784
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
+YV L N+ + W + ++R+ M E+G+ TPGCS + VH FV D S+ ++
Sbjct: 785 NYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDK 844
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIR 457
IY LDE+ ++K AGY + LH++ EEK +L HSEKLA+AFG+L +TIR
Sbjct: 845 IYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIR 904
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V KNLRIC DCHN K +S V +++RD LRFHHF+ G CSC D+W
Sbjct: 905 VFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 178/417 (42%), Gaps = 78/417 (18%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P++G +F +M + +P A S + C + L G IH ++ G D + T
Sbjct: 324 PQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTA 383
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L++LY+ EA +FD +P R+ V WN L SCY+ + L +F + +G K
Sbjct: 384 LVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREM--VLNGVK 441
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD VT L +L AC+ L L+ G+ IH + HG + +CN+L+++Y+KC + A V
Sbjct: 442 PDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVV 501
Query: 191 FKGMPEKDV-----------------------------------VSWSAMISGLAMNGHG 215
F +P ++V ++WS +I G N
Sbjct: 502 FDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRI 561
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACS-----------HC---------------GL 249
+A+E F MQ G PD+ T +L ACS HC L
Sbjct: 562 EEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNAL 621
Query: 250 VDE----GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDS 302
VD G + L R D + ++ + ++ G G +A L M VKPDS
Sbjct: 622 VDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDS 681
Query: 303 TIWRTLLGACRIHKHVTLGERVI-----EHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+ +L AC V G ++ +HL+E +A+ Y ++++YS G E+
Sbjct: 682 ATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH---YTCVVDIYSRAGCLEE 735
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P++G +F KM ++ NP S + C L G +IH V+R G D + +
Sbjct: 122 PQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSA 181
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
++ Y+ EA +FD +P RD V WN L SCY+ + L +F + + G K
Sbjct: 182 FVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLD--GVK 239
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD VT +L AC+ L L+ G+ IH + +HG + + N+L+ +Y C + A V
Sbjct: 240 PDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAV 299
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
F MP ++V++W+++ S G + + F M GV PD + +L ACS
Sbjct: 300 FDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 153/375 (40%), Gaps = 42/375 (11%)
Query: 11 PEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMT 69
P E ++ R + I P P + A K C + Q H R G D +
Sbjct: 21 PNEAIKIYTSSRARGIKPDKPVFMAVA-KACAASRDALKVKQFHDDATRCGVMSDVSIGN 79
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
+ Y + A ++FD++ RD V WN L +CY+ + L +F + +
Sbjct: 80 AFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P +T +L C+ L L+ G++IH ++ HG + + ++ + Y+KC + A
Sbjct: 140 NP--LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC-- 247
VF MP +DVV+W+++ S G + + F M GV PD T + +LSACS
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 248 --------------GLVD------------EGMMFLDRMSKDFGILP--NIHHYGCVVDL 279
G+V+ E + + F ++P N+ + +
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317
Query: 280 LGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
G + + M GVKPD ++L AC K + G+ + H +K
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTI--HGFAVKHGMV 375
Query: 337 GDYVL---LLNLYSS 348
D + L+NLY++
Sbjct: 376 EDVFVCTALVNLYAN 390
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 8 SSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
+S EE +F KM+ P S C + C MG +IH V R D
Sbjct: 558 NSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGK-EIHCYVFRHWKDWDLA 616
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L+D+Y+ + +FD +P +D +WN +I + ++AL LF+ +
Sbjct: 617 RTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKM--LL 674
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLG 185
S KPD T VL AC+H +E G +I +S +H + ++ +YS+ G L
Sbjct: 675 SMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLE 734
Query: 186 MAFEVFKGMP-EKDVVSWSAMISG 208
A+ + MP E ++W A ++G
Sbjct: 735 EAYGFIQRMPMEPTAIAWKAFLAG 758
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 259/420 (61%), Gaps = 3/420 (0%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F + ++ V+WNV+IS Y++N ++ L+ + + E +PD +TC VL+AC
Sbjct: 257 EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCE--VEPDAITCASVLRACGD 314
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L AL G +IH Y+ M L NSLI MY++CG L A VF M +DV SW+++
Sbjct: 315 LSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSL 374
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
IS M G G +A+ F MQ +G PD F +LSACSH GL++EG + +M+ D+
Sbjct: 375 ISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYK 434
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P I H+ C+VDLLGR+G +D+AY +I M +KP+ +W LL +CR++ ++ +G
Sbjct: 435 ITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAA 494
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L++L +ESG YVLL N+Y+ G W +V +R M + ++ PG S + L VH F
Sbjct: 495 DKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTF 554
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+ D HP+ EIY+ L + ++K GYV + S LH++ E+K L+ HSEKLAI F
Sbjct: 555 LAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVF 614
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L T + IR+ KNLR+C DCH AK++S + RE++IRD RFHHF++G CSC DYW
Sbjct: 615 AILNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 161/337 (47%), Gaps = 14/337 (4%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+H++V + + L LM Y+ + A +FD IP+R+ + +NV+I Y+ N
Sbjct: 53 NVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNH 112
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
DAL +F ++ G PD T VL+AC+ L G ++H + + G + +
Sbjct: 113 LYDDALLVFRDM--VSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFV 170
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N LIA+Y KCG L A V M KDVVSW++M++G A N DA++ M
Sbjct: 171 GNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQ 230
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD T +L A ++ E +++++ M + ++ + ++ + + + ++
Sbjct: 231 KPDACTMASLLPAVTNTS--SENVLYVEEMFMNLE-KKSLVSWNVMISVYMKNSMPGKSV 287
Query: 291 QLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLN 344
L MG V+PD+ ++L AC + LG R+ E++ K + +L L++
Sbjct: 288 DLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKL--CPNMLLENSLID 345
Query: 345 LYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
+Y+ G E K + + M + + + T S G+ G
Sbjct: 346 MYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTG 382
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y +S P + L+ +M + + + C+ ++ C +L+ G +IH V R
Sbjct: 273 MISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKK 332
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L +L+D+Y+ +A ++FD + RD +W LIS Y + +A+ LF
Sbjct: 333 LCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFT 392
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
+ + SG PD + + +L AC+H G L G+ + ++ ++ + L+ +
Sbjct: 393 EM--QNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLG 450
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G + A+ + K MP K + W A++S
Sbjct: 451 RSGRVDEAYNIIKQMPMKPNERVWGALLSS 480
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 132/317 (41%), Gaps = 49/317 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + ++ +F M + + +K C +L GLQ+H V + G
Sbjct: 104 MIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVG 163
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + L+ LY EA + DE+ +D V+WN +++ Y +N + DAL
Sbjct: 164 LDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDAL---- 219
Query: 121 NLNREESGC--KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
++ RE G KPD T +L A + SE+ +Y
Sbjct: 220 DICREMDGVRQKPDACTMASLLPAVTNTS------------SEN-------------VLY 254
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ E+F + +K +VSW+ MIS N +++ + M + V PD T
Sbjct: 255 VE--------EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCA 306
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDF----GILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
VL AC D + L R ++ + PN+ ++D+ R G L+ A ++
Sbjct: 307 SVLRACG-----DLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFD 361
Query: 295 SMGVKPDSTIWRTLLGA 311
M + D W +L+ A
Sbjct: 362 RMKFR-DVASWTSLISA 377
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+ +H + + +L L+ Y+ G G+A VF +PE++V+ ++ MI N
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDRMSKDFGIL 267
DA+ F M G PD T+ VL ACS GL G +F G+
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVF------KVGLD 165
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
N+ ++ L G+ G L +A ++ M K D W +++
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSK-DVVSWNSMVA 207
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 294/495 (59%), Gaps = 3/495 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ + + S + F LF+ M Q +P + + A++ C L G Q+HA + +
Sbjct: 195 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 254
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D +L+ +Y+ +A LFDE+ +DTV+++ L+S Y++N R +A +F
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 314
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +PD T + ++ AC+HL AL+ G H + G S+ ++CN+LI MY+
Sbjct: 315 KKM--QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 372
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + ++ +VF MP +D+VSW+ MI+G ++G G++A F M G PD TF
Sbjct: 373 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 432
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LSACSH GLV EG + M +G+ P + HY C+VDLL R G LD+AY+ I SM ++
Sbjct: 433 LLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 492
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D +W LLGACR++K++ LG++V + EL + +G++VLL N+YS+ G +++ E+R
Sbjct: 493 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVR 552
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+G + +PGCS I + G +H FV D SHP+ EIY+ LD I +K GY + +
Sbjct: 553 IIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 612
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L +L EEK AL HSEKLAIA+G+L+ TI V KNLR+C DCH K +S V
Sbjct: 613 FVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVK 672
Query: 480 NREVIIRDRLRFHHF 494
R +I+RD RFHHF
Sbjct: 673 RRAIIVRDANRFHHF 687
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 13/300 (4%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M + R+ N + FA+K C G IH + G Q D + T L+D+Y
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
+A +F +P RD VAWN +++ Y + A+ ++ + +P+ T + +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 141 QACAHLGALEFGEKIHRYI------SEHGYGSKMN----LCNSLIAMYSKCGSLGMAFEV 190
A GAL G +H Y SK+ L +L+ MY+KCGSL A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQTFTGVLSACSHCGL 249
F MP ++ V+WSA+I G + A F AM G+ F + L AC+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ G ++K G+ ++ ++ + +AGL+DQA L M VK D+ + L+
Sbjct: 241 LRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALV 298
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P++ T L+AC+ L G IHR+ G + + + +L+ MY KC L A +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVLSACSHCG 248
F MP +D+V+W+AM++G A +G A+ +MQ + P+ T +L + G
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 249 LVDEGM----------MFLDRMSKDF---GILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+ +G + +R SK G+L ++D+ + G L A ++ +
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGT----ALLDMYAKCGSLLYARRVFDA 183
Query: 296 MGVKPDSTIWRTLLG 310
M + + T W L+G
Sbjct: 184 MPARNEVT-WSALIG 197
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 274/442 (61%), Gaps = 1/442 (0%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
++ L T ++ Y +A + F+ +P R V+WN +++ Y++N R DAL +F +
Sbjct: 177 NAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMV 236
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
R+ + +P++ T VL C++L AL FG ++H++ ++ ++ SL++MY KCG
Sbjct: 237 RD-ADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGD 295
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A ++F M +DV++W+AMISG A +G GR+AIE F M+ GV P+ TF VL+A
Sbjct: 296 LDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTA 355
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C H G+ D GM +RM + +GI + HY C+VDLL RAG L++A LI SM +P +
Sbjct: 356 CIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPS 415
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+ TLL A R++K++ E LIE Q +G YV L N+Y+ W V +R +M
Sbjct: 416 AYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMK 475
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+ + TPG S + + GV+H F +D HP+++ I++ L ++ +++K GYV ++ LH
Sbjct: 476 DNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALH 535
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
++ K L HSEKLAIAFG+L+T PG T+R+ KNLR+C DCH AK++S + +RE+
Sbjct: 536 DVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIEDREI 595
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
I+RD RFHHFR G CSC DYW
Sbjct: 596 ILRDTTRFHHFRSGHCSCGDYW 617
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 92 PQRDTVA-WNVLISCYIRNQRT--------RDALCLFDNLNREESGCKPDDVTCLLVLQA 142
PQR T A +N L++ Y R R DA LFD + R PD V+ +L
Sbjct: 38 PQRKTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPR------PDAVSYNTLLSC 91
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
H A + + + + N++++ S+ G++G A VF MP ++ +SW
Sbjct: 92 --HFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISW 149
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT---FTGVLSACSHCGLVDEGMMFLDR 259
+AM+S A G A E F PD + +T ++S G V++ M F +
Sbjct: 150 NAMVSCFAHAGDMCAAEECFEDA------PDKENAVLWTAMVSGYMDSGHVEKAMQFFEA 203
Query: 260 MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM----GVKPDSTIWRTLLGACRIH 315
M + ++ + VV + + A + +M V+P+ + ++L C
Sbjct: 204 MP-----VRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNL 258
Query: 316 KHVTLGERVIEHLIELK-AQESGDYVLLLNLYSSVGD 351
+ G +V + +L ++ L+++Y GD
Sbjct: 259 SALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGD 295
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 294/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLR 58
M+ EE LF +M + P + ++ I C +L G+QIHA V +
Sbjct: 156 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 215
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY D+ + L+ Y+ ++ ++ ++F + V W L++ Y N + DAL +
Sbjct: 216 LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 275
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + RE G P+ + L +C L AL++G +IH + G + + + NSLI MY
Sbjct: 276 FGEMMRE--GVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMY 333
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+CG+L +FK + +K++VSW+++I G A +G G A+ F M R+ V PD+ TFT
Sbjct: 334 YRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFT 393
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G+ +G S++ + HY C+VD+LGR+G L++A +LI +M V
Sbjct: 394 GLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPV 453
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
K +S +W LL AC +H + + ER + +I+L+ S YVLL NLY+S W V +
Sbjct: 454 KANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRI 513
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M ++G+ PG S I +KG +EF+ D SHP + IYQ L+ + +LK GYV +
Sbjct: 514 RREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQ 573
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E+K LSYHSE+LAI FG+++T G+TI V KNLR+C DCH+ K+++ +
Sbjct: 574 RFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKI 633
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF +GRCSC DYW
Sbjct: 634 VRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 54 ARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
AR + D D L T ++ Y+ + A +LF E+P +D V+WN +I
Sbjct: 14 ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADL 73
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
A LFD + V+ ++ G +E E + + + N
Sbjct: 74 TMARKLFDEMPERSV------VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAA----WN 123
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG--V 230
S+I Y G + +F+ MP ++V+SW++MI GL +G +A+ F M G V
Sbjct: 124 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 183
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM 254
P T+ V++AC++ + +G+
Sbjct: 184 KPTSSTYCCVITACANASALYQGV 207
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 18/231 (7%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +FD++ D + ++I+ Y RN R AL LF + + D V+ +++
Sbjct: 13 EARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK------DVVSWNSMIKG 66
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C L K+ + E S + N + G + +A +F MP +D+ +W
Sbjct: 67 CFDCADLTMARKLFDEMPERSVVSWTTMINGFLQF----GKIEVAEGLFYKMPFRDIAAW 122
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM-MFLDRMS 261
++MI G NG D + F M V ++T ++ G +E + +F M
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVI----SWTSMIGGLDQHGRSEEALGLFRQMMG 178
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLL 309
+ P Y CV+ A L Q Q+ + +G D+ I L+
Sbjct: 179 CGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALI 229
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 283/495 (57%), Gaps = 7/495 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+EGF LF +M + + A A+ C S ++ V+ +G D + +
Sbjct: 93 KEGFSLFRQMLSEGSRPSRGAILNAMACVR---SHEEADDVYRVVVENGLDFDQSVQSAA 149
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+++ + A KLFD I +D V W I Y++ +AL L + + G P
Sbjct: 150 AGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQ--GIFP 207
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
D +T L V++AC+ L + + +H I+ Y + + +LI +Y KCGSL A +V
Sbjct: 208 DAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKV 267
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F GM E+++++WSAMISG M+G GR+A+ F M +A V PD TF +LSACSH GLV
Sbjct: 268 FDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLV 326
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
EG + M++DFG+ P HY C+VD+LGRAG LD+A I M V+P++ +W LLG
Sbjct: 327 AEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLG 386
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACRIH +V L E V L +L +G YV+L N+Y+ G ++ +R M +G++
Sbjct: 387 ACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKI 446
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
G S I +K ++ FV D SHP+ + IY L+ + +++ GY +I LH++ E K
Sbjct: 447 AGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETK 506
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+ L HSEKLAI FG+L PG+ IR+ KNLR+C DCH K +S V RE+++RD R
Sbjct: 507 ESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHR 566
Query: 491 FHHFREGRCSCNDYW 505
FHHF+ G CSC DYW
Sbjct: 567 FHHFKNGACSCRDYW 581
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 11/348 (3%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
I + F F IK C G++IH V++ GYQ + +L+ +Y +K +
Sbjct: 6 IQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++FDE+P ++ V+W+ +I +++ R ++ LF + E G +P +L A A
Sbjct: 66 QVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSE--GSRPSRGA---ILNAMAC 120
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ + E + ++R + E+G ++ ++ M+++CG + +A ++F G+ KD+V+W+
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I +A+ M G+FPD T GV+ ACS + ++ F
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFF 240
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
+ ++DL + G L A ++ M + T W ++ +H G +
Sbjct: 241 YNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIIT-WSAMISGYGMHG---WGREAL 296
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE--KGLQTTP 371
++KA D++ +++ S+ V E E N + TP
Sbjct: 297 NLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTP 344
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 62/289 (21%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G +PD+ T +++AC+ L EFG +IH+ + + GY S++ + NSLI MY KC ++
Sbjct: 5 GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP--------------- 232
+VF MP+K+ VSWSA+I + ++ F M G P
Sbjct: 65 RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSH 124
Query: 233 -----------------DDQTFTGVLSACSHCGLVDEGMMFLDR-MSKDFGILPNIHHYG 274
D + + CG V+ D MSKD + +
Sbjct: 125 EEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKD------LVTWA 178
Query: 275 CVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI-- 329
++ +A + +A L+ M G+ PD+ TLLG R TL + H++
Sbjct: 179 TTIEAYVKADMPLEALGLLKQMMLQGIFPDAI---TLLGVIRACS--TLASFQLAHIVHG 233
Query: 330 ---------ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
+L A E+ L++LY G +++ + M E+ + T
Sbjct: 234 IITTGFFYNQLLAVETA----LIDLYVKCGSLTYARKVFDGMQERNIIT 278
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 282/489 (57%), Gaps = 2/489 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF + + N + C L G IH ++ G L+ +++ +L++LY
Sbjct: 127 LFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYG 186
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
AC LF+ + + V+WN +++ ++ + F + R +G D T
Sbjct: 187 KCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRR--AGINSDQATV 244
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ +L AC +LG + E +H YI G + + +L+ +Y+K G+L + +VF GM
Sbjct: 245 VSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMIN 304
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
D V+W+AM+S AM+G GR+AIE F M R GV PD TFT +LSACSH GLV+EG +
Sbjct: 305 PDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNY 364
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
M + +G+ + HY C+VDLLGR+G L+ AY+LI SM ++P+S +W L+GACR+
Sbjct: 365 FKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRG 424
Query: 317 HVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI 376
++ LG+ V E L L +S +Y+ L N+YS+ G W ++R M E+ L PGCS I
Sbjct: 425 NIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYI 484
Query: 377 GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY 436
+H FV+ D SHP +IY L+E+ ++ + G+ ++ LH++ E K + ++
Sbjct: 485 EHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINK 544
Query: 437 HSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFRE 496
HSEKLAIAFG+L T G + + KN+RIC DCH FAK++S + R +IIRD RFHHF
Sbjct: 545 HSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTN 604
Query: 497 GRCSCNDYW 505
G CSC DYW
Sbjct: 605 GLCSCGDYW 613
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 9/312 (2%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H RV++ + L+ Y + +A +LFDE+P +D V+WN LIS + R
Sbjct: 60 LHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRAD 119
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
L L + R E G KP++VT + V+ ACA +G L+ G+ IH + G ++ +
Sbjct: 120 LGICLGLLFRM-RFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVV 178
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
NSLI +Y KCG L A +F+GM + +VSW++M++ G I F M+RAG+
Sbjct: 179 NSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGIN 238
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
D T +L AC + G V + + + G+ N+ ++DL + G L + +
Sbjct: 239 SDQATVVSLLLACENLG-VRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCK 297
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES--GDYVLLLNLYSSV 349
+ M + PD+ W +L + +H G IEH EL +E D+V +L S+
Sbjct: 298 VFGGM-INPDAVAWTAMLSSYAMHGR---GREAIEHF-ELMVREGVVPDHVTFTHLLSAC 352
Query: 350 GDWEKVKELREF 361
V+E + +
Sbjct: 353 SHSGLVEEGKNY 364
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 294/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLR 58
M+ EE LF +M + P + ++ I C +L G+QIHA V +
Sbjct: 172 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 231
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
GY D+ + L+ Y+ ++ ++ ++F + V W L++ Y N + DAL +
Sbjct: 232 LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 291
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + RE G P+ + L +C L AL++G +IH + G + + + NSLI MY
Sbjct: 292 FGEMMRE--GVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMY 349
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+CG+L +FK + +K++VSW+++I G A +G G A+ F M R+ V PD+ TFT
Sbjct: 350 YRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFT 409
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
G+LSACSH G+ +G S++ + HY C+VD+LGR+G L++A +LI +M V
Sbjct: 410 GLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPV 469
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
K +S +W LL AC +H + + ER + +I+L+ S YVLL NLY+S W V +
Sbjct: 470 KANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRI 529
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M ++G+ PG S I +KG +EF+ D SHP + IYQ L+ + +LK GYV +
Sbjct: 530 RREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQ 589
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E+K LSYHSE+LAI FG+++T G+TI V KNLR+C DCH+ K+++ +
Sbjct: 590 RFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKI 649
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R++I+RD RFHHF +GRCSC DYW
Sbjct: 650 VRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 54 ARVLRDGYQL-DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRT 112
AR + D D L T ++ Y+ + A +LF E+P +D V+WN +I
Sbjct: 30 ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADL 89
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
A LFD + V+ ++ G +E E + + + N
Sbjct: 90 TMARKLFDEMPERSV------VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAA----WN 139
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG--V 230
S+I Y G + +F+ MP ++V+SW++MI GL +G +A+ F M G V
Sbjct: 140 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 199
Query: 231 FPDDQTFTGVLSACSHCGLVDEGM 254
P T+ V++AC++ + +G+
Sbjct: 200 KPTSSTYCCVITACANASALYQGV 223
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 18/231 (7%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA +FD++ D + ++I+ Y RN R AL LF + + D V+ +++
Sbjct: 29 EARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK------DVVSWNSMIKG 82
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C L K+ + E S + N + G + +A +F MP +D+ +W
Sbjct: 83 CFDCADLTMARKLFDEMPERSVVSWTTMINGFLQF----GKIEVAEGLFYKMPFRDIAAW 138
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM-MFLDRMS 261
++MI G NG D + F M V ++T ++ G +E + +F M
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVI----SWTSMIGGLDQHGRSEEALGLFRQMMG 194
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWRTLL 309
+ P Y CV+ A L Q Q+ + +G D+ I L+
Sbjct: 195 CGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALI 245
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 291/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + PEE L M + R N F + +K G QIHA ++
Sbjct: 123 LIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCD 182
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + + L+D+Y+ A +FD++ ++ V+WN LIS + R AL F
Sbjct: 183 WHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFA 242
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R +G + T V + A LGALE G+ +H ++ + N+L+ MY+K
Sbjct: 243 EMLR--NGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAK 300
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A +VF + +KD+V+W+ M++ A G G++A+ F M+++G++ + TF +
Sbjct: 301 SGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCI 360
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GLV EG + + M K++ + P I H+ VV LLGRAGLL+ A I M ++P
Sbjct: 361 LTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEP 419
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ +W LL ACR+HK+ +G+ +H+ EL +SG VLL N+Y+S G W+ +R
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRR 479
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ P CS + ++ VH FV +D +HPR EIY+M +I+K+++ GYV ++
Sbjct: 480 IMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDY 539
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L + +E+ L YHSEKLA+AF ++ P G TIR+ KN+RIC DCH+ K +S V+
Sbjct: 540 VLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFG 599
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 600 REIVVRDTNRFHHFSNGSCSCADYW 624
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 149/314 (47%), Gaps = 10/314 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
PT +F I C + +L ++HA + + D+ L +L+ LY EA K
Sbjct: 49 PTPRVYHTF-ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARK 107
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FDE+ ++D V+W LI+ Y +N +A+ L + + KP+ T +L+A
Sbjct: 108 VFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGR--FKPNGFTFASLLKAAGAH 165
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G +IH + + + + ++L+ MY++CG + MA VF + K+ VSW+A+I
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
SG A G G A+ +F M R G T++ V S+ + G +++G M K
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQK 285
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ ++D+ ++G + A ++ + K D W T+L A LG+ +
Sbjct: 286 MTAFAG-NTLLDMYAKSGSMIDARKVFDRVDDK-DLVTWNTMLTA---FAQYGLGKEAVS 340
Query: 327 HLIELKAQESGDYV 340
H E++ +SG Y+
Sbjct: 341 HFEEMR--KSGIYL 352
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/540 (36%), Positives = 306/540 (56%), Gaps = 47/540 (8%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
+ P EGF+ F++MR++ + + A C + L G Q +++ G L ++
Sbjct: 101 TKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVC 160
Query: 69 TTLMDLY------------------------ST-------FEKSFEACKLFDEIPQRDTV 97
+M++Y ST +E +FDE+P+R+ V
Sbjct: 161 NAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEV 220
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLN-REESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
W ++I+ Y+ N +R+ L D + R G + VT +L ACA G + G +H
Sbjct: 221 GWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGL--NFVTLSSILSACAQSGDVLMGRWVH 278
Query: 157 RYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
Y + G G +M++ +L+ MY+KCG + MAF+VFK +P+++VV+W+AM+ GLAM+G
Sbjct: 279 VY-ALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGR 337
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
G+ ++ F M PDD TF VLSACSH GLVD+G + + ++G P I HY
Sbjct: 338 GKFVLDIFPKMIEEAK-PDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYA 396
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
C+VD+LGRAG L++A LI M + P+ + +LLG+C H + LGER+++ LI++
Sbjct: 397 CMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGH 456
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPR 394
+ +VLL N+Y G +K LR+ + KG++ PG S+I + G +H+F D SHP
Sbjct: 457 NTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPL 516
Query: 395 INEIYQMLDEINKQLKIAGYVAEITSEL---------HNLGAEEKGNALSYHSEKLAIAF 445
EIY L+ + ++L++AGYV T+++ + EEK AL HSEKLA+ F
Sbjct: 517 TKEIYHALNNMIQRLRLAGYVPNTTNQVFPGSDGREGSSEEMEEKEQALFLHSEKLAVCF 576
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G ++T PG + + KNLRIC DCH+ K++S +YNRE++IRDR RFH F+ G CSC+DYW
Sbjct: 577 GHISTKPGAPLYIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 41/352 (11%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQ---LMTTLMDLYSTFEKSFEACKLFDEIPQ 93
++ C + SL G ++HA +L G S L+ L LY++ + A LF +IP+
Sbjct: 22 LRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPR 81
Query: 94 --RDTVAWNVLISCYIRN-QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+D W L++ +++ + + F + +E G DDV + V C + L
Sbjct: 82 SHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKE--GVVLDDVAMISVFVLCTRVEDLG 139
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG------------------SLGMAFE--- 189
G + + + G G + +CN+++ MY KCG S E
Sbjct: 140 MGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVV 199
Query: 190 ----------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTFT 238
VF MPE++ V W+ MI+G NG R+ M R + + T +
Sbjct: 200 KWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLS 259
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+LSAC+ G V G K G +I +VD+ + G +D A+++ +
Sbjct: 260 SILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLP- 318
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
K + W +LG +H + +IE + ++ +L+ S G
Sbjct: 319 KRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEAKPDDLTFMAVLSACSHSG 370
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + EGF L ++M + R+ N S + C + ++ G +H L+
Sbjct: 225 MIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKG 284
Query: 60 -GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G ++ + T L+D+Y+ A K+F +P+R+ VAWN ++ + R + L +
Sbjct: 285 MGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDI 344
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAM 177
F + E KPDD+T + VL AC+H G ++ G R + SE+G K+ ++ +
Sbjct: 345 FPKMIEE---AKPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDI 401
Query: 178 YSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGR 216
+ G L A + K MP +VV S + S N HG+
Sbjct: 402 LGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGS---CNAHGK 439
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMN---LCNSLIAMYSKCGSLGMAFEVFKGMP 195
+L++CA +L G+K+H I G S L N+L +Y+ CG A +F +P
Sbjct: 21 LLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIP 80
Query: 196 E--KDVVSWSAMISGLAMNG-HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC---GL 249
KDV W+ +++ L +G + F M++ GV DD V C+ G+
Sbjct: 81 RSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGM 140
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ L +M G + ++++ + GL+++ ++ M + + W TLL
Sbjct: 141 GRQAQGCLVKMGLGLG----VKVCNAIMNMYVKCGLVEEVRRVFCEMNER-NVVSWSTLL 195
Query: 310 GACRIHKHVTLGERVIEHLIE 330
+ V G V + + E
Sbjct: 196 EGVVKWEGVENGRVVFDEMPE 216
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 195/535 (36%), Positives = 299/535 (55%), Gaps = 32/535 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M Y E +F M + + + AI C + +++ G H VLR+G
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEI----------------------------- 91
++ + L+D+Y + A ++FD +
Sbjct: 368 FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 92 --PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
P+++ V+WN +IS ++ +A+ +F ++ +E G D VT + + AC HLGAL
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE-GVNADGVTMMSIASACGHLGAL 486
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ + I+ YI ++G + L +L+ M+S+CG A +F + +DV +W+A I +
Sbjct: 487 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM G+ AIE F M G+ PD F G L+ACSH GLV +G M K G+ P
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HYGC+VDLLGRAGLL++A QLI M ++P+ IW +LL ACR+ +V + E +
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
L + +G YVLL N+Y+S G W + ++R M EKGL+ PG S+I ++G HEF D
Sbjct: 667 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 726
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP + I MLDE++++ G+V ++++ L ++ +EK LS HSEKLA+A+G+++
Sbjct: 727 ESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLIS 786
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
+ GTTIR+ KNLR+C DCH+FAK S VYNRE+I+RD RFH+ R+G+CSC D+
Sbjct: 787 SNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 185/431 (42%), Gaps = 72/431 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ ++ LF +M R + + N I C K L G +++A +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +++ +++ L+D+Y A +LFDE + N + S Y+R TR+AL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + +SG +PD ++ L + +C+ L + +G+ H Y+ +G+ S N+CN+LI MY
Sbjct: 326 NLM--MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 180 KC-------------------------------GSLGMAFEVFKGMPEKDVVSWSAMISG 208
KC G + A+E F+ MPEK++VSW+ +ISG
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 209 LAMNGHGRDAIESFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
L +AIE F +MQ + GV D T + SAC H G +D + K+ GI
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQ 502
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSM------------------------------- 296
++ +VD+ R G + A + S+
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD--YVLLLNLYSSVGD 351
G+KPD + L AC V G+ + +++L D Y +++L G
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 352 WEKVKELREFM 362
E+ +L E M
Sbjct: 623 LEEAVQLIEDM 633
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 180/410 (43%), Gaps = 54/410 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ S E LF +M I + + F + C K + G+QIH +++ G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + +L+ Y+ + A K+FDE+ +R+ V+W +I Y R +DA+ LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+E P+ VT + V+ ACA L LE GEK++ +I G + ++L+ MY K
Sbjct: 225 RMVRDEE-VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C ++ +A +F ++ +AM S G R+A+ F M +GV PD +
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 241 LSACSH-----------------------------------CGLVDEGMMFLDRMSKDFG 265
+S+CS C D DRMS
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGER 323
+ N G V + G +D A++ +M P+ I W T++ +L E
Sbjct: 404 VTWNSIVAGYVEN-----GEVDAAWETFETM---PEKNIVSWNTIISGL---VQGSLFEE 452
Query: 324 VIEHLIELKAQE--SGDYVLLLNLYSS---VGDWEKVKELREFMNEKGLQ 368
IE +++QE + D V ++++ S+ +G + K + ++ + G+Q
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 129/277 (46%), Gaps = 11/277 (3%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQI-HARVLRDGYQLDSQLMTTLM----DLYSTFEKSFE 83
N C+ A +K C + L++ H + + G D +T L+ +L + SF
Sbjct: 27 NQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF- 85
Query: 84 ACKLFDEIPQRDT-VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
A ++F+ T +N LI Y + +A+ LF L SG PD T L A
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF--LRMMNSGISPDKYTFPFGLSA 143
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
CA A G +IH I + GY + + NSL+ Y++CG L A +VF M E++VVSW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 203 SAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
++MI G A +DA++ F M R V P+ T V+SAC+ ++ G +
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI- 262
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
++ GI N +VD+ + +D A +L G
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA 299
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 297/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + P + + +M + I + F+ + C + L G +IH VLR+G
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++S + +L+ LY K F F+ + +++V WN ++S Y +N+ +AL LF
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G +PD++ +L AC+ L AL G+++H + ++ + SL+ MY+K
Sbjct: 608 QMLSD--GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAK 665
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G LG + +F + K+V SW+ MI+G ++G G A+E F M+R+ PD TF GV
Sbjct: 666 SGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGV 725
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GLV EG+ +L +M + + P + HY CV+D+LGRAG L++A I M +P
Sbjct: 726 LQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEP 785
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ IW +LL + + + +GE+ E L+ L+A ++ Y+LL NLY++ G W+ V+ +R+
Sbjct: 786 DAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQ 845
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + LQ GCS I L+G V+ F+ + S+P +EI +M + + KQ+ GY + +
Sbjct: 846 KMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSC 905
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH L EK L HSEK+AI FG L T GTT+R++KNLRIC DCHN AK +S
Sbjct: 906 VLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAK 965
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE++IRD RFHHF++G CSC DYW
Sbjct: 966 REIVIRDNKRFHHFKKGICSCGDYW 990
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 131/250 (52%), Gaps = 5/250 (2%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T L+ +YS E+ +FD + ++ WN L+S Y+RN+ +A+ F L
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLEL- 200
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ +PD+ T +++AC + G+ +H + G + + N++IA+Y KCG
Sbjct: 201 ISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGF 260
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVL 241
L A E+F MPE++++SW+++I G + NG +A +F ++ + G+ PD T +L
Sbjct: 261 LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
CS G VD GM+ + M+ G++ + ++D+ + G L +A L + K
Sbjct: 321 PVCSGEGNVDVGMV-IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 379
Query: 302 STIWRTLLGA 311
+ W +++GA
Sbjct: 380 VS-WNSMIGA 388
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 145/338 (42%), Gaps = 38/338 (11%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G+ IH ++ G + + L+D+YS EA LF +I + V+WN +I Y R
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ L + EE + ++VT L +L AC L +H Y H + K
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+ IA Y+KCGSL A VF GM K V SW+A+I G A NG A++ + M R
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIH----HYGCVVDLLG 281
G+ PDD + +L AC GL+ G F+ R + + ++ C G
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 282 RA-----------------------GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIH 315
R L ++A L M G++PD ++LGAC
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631
Query: 316 KHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVG 350
+ LG+ V H LK D + L+++Y+ G
Sbjct: 632 SALGLGKEV--HCFALKNSLMEDNFVACSLMDMYAKSG 667
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
+V Y + +E + F E + + F IK C C + G +H ++
Sbjct: 180 LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +D + ++ LY EA +LFD++P+++ ++WN LI + N +A F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+L G PD T + +L C+ G ++ G IH + G ++ +CN+LI MYS
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
KCG L A +F+ + K VVSW++MI + G E+F +++
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF---VFETFDLLRK 404
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 282/512 (55%), Gaps = 12/512 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV A++ + + L E M + I N + L G +H R+ G
Sbjct: 129 MVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCG 188
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++Y+ +AC +F+ + R +AW L++ Y N RDAL +F
Sbjct: 189 FLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVF- 247
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC--NSLIAMY 178
L G +P +VT + V+ CA + G ++H I S+ N+C N+LI MY
Sbjct: 248 -LLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDAR---SEANVCVGNALINMY 303
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-----GVFPD 233
KC S A +VF M KD+++W++MI+ NG+G A+E + MQ + G+ D
Sbjct: 304 GKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHD 363
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
D TF GVL ACSH GLV + M D+G P GC++DLLGRAG LD+A + I
Sbjct: 364 DITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFI 423
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWE 353
SM PD TIW LLGAC H V R + ++ L+ +SG YV L NLY+ W+
Sbjct: 424 NSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWD 483
Query: 354 KVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG 413
+ +R+ M+++G+ G S+I + GV+HEF+ D SHPR EIY+ L I ++ G
Sbjct: 484 DMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERG 543
Query: 414 YVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
YV +I + LHN E K +HSE+LAIAFG++++P GT +R+ KNLR+C DCH+ K
Sbjct: 544 YVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATK 603
Query: 474 VLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++S R++I+RD RFH FR G CSC DYW
Sbjct: 604 IISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
++ ++ C ++ G +IH ++ G++ L L+++Y A +F P+
Sbjct: 61 AWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPR 120
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
R+ +W ++++ + N DAL L + ++ E G P+ +T + +L A A L L+ G
Sbjct: 121 RNVFSWTIMVAAFAHNGHYMDALNLLEIMDLE--GISPNSITFIELLGAVAALSWLDRGR 178
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
+HR I+ G+ + + + N LI MY+KC SL A VF+ + + V++W+A+++ A+NG
Sbjct: 179 ALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNG 238
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC---GLVDEGMMFLDRMSKDFGILPNI 270
RDA++ F M GV P + TF V+ C+ G+ E +D S+ N+
Sbjct: 239 FFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARSE-----ANV 293
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
++++ G+ D+A ++ +M K D W +++
Sbjct: 294 CVGNALINMYGKCASPDEARKVFDAMQRK-DIITWNSMIA 332
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 113 RDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCN 172
RDA+ L E+ P L+ C A+ G++IH +I G+ S LCN
Sbjct: 42 RDAVQLL-----EDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCN 96
Query: 173 SLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFP 232
L+ MY KCGSL A VF P ++V SW+ M++ A NGH DA+ M G+ P
Sbjct: 97 LLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISP 156
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF +L A + +D G R++ G L +I C++++ + L A +
Sbjct: 157 NSITFIELLGAVAALSWLDRGRALHRRIAC-CGFLADIFVANCLINMYAKCRSLADACSV 215
Query: 293 ITSMGVKPDSTIWRTLLGA 311
S+ + W L+ A
Sbjct: 216 FESLTSR-SVIAWTALVAA 233
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 297/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ + P + + +M + I + F+ + C + L G +IH VLR+G
Sbjct: 488 VIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++S + +L+ LY K F F+ + +++V WN ++S Y +N+ +AL LF
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G +PD++ +L AC+ L AL G+++H + ++ + SL+ MY+K
Sbjct: 608 QMLSD--GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAK 665
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G LG + +F + K+V SW+ MI+G ++G G A+E F M+R+ PD TF GV
Sbjct: 666 SGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGV 725
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GLV EG+ +L +M + + P + HY CV+D+LGRAG L++A I M +P
Sbjct: 726 LQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEP 785
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ IW +LL + + + +GE+ E L+ L+A ++ Y+LL NLY++ G W+ V+ +R+
Sbjct: 786 DAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQ 845
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + LQ GCS I L+G V+ F+ + S+P +EI +M + + KQ+ GY + +
Sbjct: 846 KMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSC 905
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH L EK L HSEK+AI FG L T GTT+R++KNLRIC DCHN AK +S
Sbjct: 906 VLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAK 965
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE++IRD RFHHF++G CSC DYW
Sbjct: 966 REIVIRDNKRFHHFKKGICSCGDYW 990
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 131/250 (52%), Gaps = 5/250 (2%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T L+ +YS E+ +FD + ++ WN L+S Y+RN+ +A+ F L
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLEL- 200
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ +PD+ T +++AC + G+ +H + G + + N++IA+Y KCG
Sbjct: 201 ISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGF 260
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA--GVFPDDQTFTGVL 241
L A E+F MPE++++SW+++I G + NG +A +F ++ + G+ PD T +L
Sbjct: 261 LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
CS G VD GM+ + M+ G++ + ++D+ + G L +A L + K
Sbjct: 321 PVCSGEGNVDVGMV-IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 379
Query: 302 STIWRTLLGA 311
+ W +++GA
Sbjct: 380 VS-WNSMIGA 388
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 145/338 (42%), Gaps = 38/338 (11%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G+ IH ++ G + + L+D+YS EA LF +I + V+WN +I Y R
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ L + EE + ++VT L +L AC L +H Y H + K
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ N+ IA Y+KCGSL A VF GM K V SW+A+I G A NG A++ + M R
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIH----HYGCVVDLLG 281
G+ PDD + +L AC GL+ G F+ R + + ++ C G
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 282 RA-----------------------GLLDQAYQLITSM---GVKPDSTIWRTLLGACRIH 315
R L ++A L M G++PD ++LGAC
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631
Query: 316 KHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVG 350
+ LG+ V H LK D + L+++Y+ G
Sbjct: 632 SALGLGKEV--HCFALKNSLMEDNFVACSLMDMYAKSG 667
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 1 MVRAYSMSSSPEEGFYLF-EKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
+V Y + +E + F E + + F IK C C + G +H ++
Sbjct: 180 LVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKM 239
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +D + ++ LY EA +LFD++P+++ ++WN LI + N +A F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+L G PD T + +L C+ G ++ G IH + G ++ +CN+LI MYS
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
KCG L A +F+ + K VVSW++MI + G E+F +++
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF---VFETFDLLRK 404
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 198/540 (36%), Positives = 302/540 (55%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y++ +E ++ MR++ I F S +K C L G Q HA+ R
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR------------ 108
+ T++D+Y E A K+FDE+P+RD ++W LI+ Y R
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 109 -------------------NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
N + ++AL FD + E+SG + D+VT + ACA LGA
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM--EKSGIRADEVTVAGYISACAQLGAS 297
Query: 150 EFGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
++ ++ + + GY ++ ++LI MYSKCG++ A VF M K+V ++S+MI
Sbjct: 298 KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMIL 357
Query: 208 GLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
GLA +G ++A+ F M + + P+ TF G L ACSH GLVD+G D M + FG+
Sbjct: 358 GLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGV 417
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P HY C+VDLLGR G L +A +LI +M V+P +W LLGACRIH + + E E
Sbjct: 418 QPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAE 477
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS-TIGLKGVVHEF 385
HL EL+ G+Y+LL N+Y+S GDW V +R+ + EKGL+ TP S + G +H+F
Sbjct: 478 HLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKF 537
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+++HP N+I L+E+ ++L + GY +++S +++ K L H+EKLA+AF
Sbjct: 538 FPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAF 597
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L T +TI + KNLR+C+DCH F ++ S V + +I+RD +RFHHFR G CSC D+W
Sbjct: 598 SLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE--ACKLFDEIPQRDTVAWNVLISCYIR 108
QIH VLR G ++T L+ + + A ++ + + R+ W +I Y
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ +A+ ++ + +EE P T +L+AC + L G + H +
Sbjct: 127 EGKFDEAIAMYGCMRKEE--ITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS--------------------------- 201
+ N++I MY KC S+ A +VF MPE+DV+S
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 202 ----WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
W+AM++G A N ++A+E F M+++G+ D+ T G +SAC+ G +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG----ASKYA 300
Query: 258 DR---MSKDFGILPNIHHY--GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
DR +++ G P+ H ++D+ + G +++A + SM K T +LG
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 295/499 (59%), Gaps = 4/499 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ + Y + P E L++KMR + + F F +K + L G+ +HA VL++G
Sbjct: 80 LFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + T L+ +Y F + A LF+ + +D VAWN I+ ++ + AL F+
Sbjct: 140 FECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFN 199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + D T + +L AC LG+L+ GE+I+ + + + N+ + M+ K
Sbjct: 200 KMCAD--AVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLK 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS A +F M +++VVSWS MI G AMNG +A+ F MQ G+ P+ TF GV
Sbjct: 258 CGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGV 317
Query: 241 LSACSHCGLVDEGMMFLDRMSK--DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
LSACSH GLV+EG + M + D + P HY C+VDLLGR+GLL++AY+ I M V
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRV 377
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+PD+ IW LLGAC +H+ + LG++V + L+E +VLL N+Y++ G W+ V ++
Sbjct: 378 EPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M + G + S++ G +H F D+SHP+ IY+ LDEI K+++ GYV +
Sbjct: 438 RSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDT 497
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
S H++ EEK ++LS+HSEKLAIAFG++ G IRV KNLR C DCH F+K +S +
Sbjct: 498 GSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRL 557
Query: 479 YNREVIIRDRLRFHHFREG 497
+RE+I+RD+ RFHHFR G
Sbjct: 558 TSREIIMRDKNRFHHFRNG 576
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+IHA V+R G+ + L+T L++ A ++FDE+P+ WN L Y+RNQ
Sbjct: 29 KIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQ 88
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
+++ L+ + + G +PD+ T V++A + LG L G +H ++ ++G+ +
Sbjct: 89 LPFESVLLYKKM--RDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIV 146
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
L+ MY K G L A +F+ M KD+V+W+A I+ G+ A+E F M V
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAV 206
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T +LSAC G +D G DR K+ I NI +D+ + G + A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLDIGEEIYDRARKE-EIECNIIVENARLDMHLKCGSTEAAR 265
Query: 291 QLITSMGVKPDSTIWRTLL 309
L M + + W T++
Sbjct: 266 VLFDDMKQR-NVVSWSTMI 283
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+KIH + G+ K +L L+ G + A +VF MP+ + W+ + G N
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRN 87
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD----FGILP 268
+++ + M+ GV PD+ T+ V+ A S G++ G+ + K+ GI+
Sbjct: 88 QLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVA 147
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+V + + G L A L SM VK D W + C
Sbjct: 148 T-----ELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFIAVC 185
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 184/467 (39%), Positives = 287/467 (61%), Gaps = 3/467 (0%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C + L GLQIHA++L+ G D + +TL+D Y + A K FD + R+ VAW
Sbjct: 239 CAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAW 298
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
+++ Y++N + L LF + E++ +P++ T ++L ACA L AL +G+ +H I
Sbjct: 299 TAVLTAYLQNGHFEETLNLFTKMELEDT--RPNEFTFAVLLNACASLVALAYGDLLHGRI 356
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
G+ + + + N+LI MYSK G++ ++ VF M +DV++W+AMI G + +G G+ A+
Sbjct: 357 VMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQAL 416
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M AG P+ TF GVLSAC H LV EG + D++ K F + P + HY C+V L
Sbjct: 417 LVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVAL 476
Query: 280 LGRAGLLDQAYQLI-TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
LGRAGLLD+A + T+ VK D WRTLL AC IH++ LG+++ E +I++ + G
Sbjct: 477 LGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGT 536
Query: 339 YVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEI 398
Y LL N+++ W+ V ++R+ M E+ ++ PG S + ++ H FV + +HP +I
Sbjct: 537 YTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQI 596
Query: 399 YQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRV 458
++ + ++ +K GY ++ LH++ E+K LS+HSEKLA+A+G++ PP IR+
Sbjct: 597 FEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRI 656
Query: 459 AKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KNLR+C DCH K++S NR +I+RD RFHHFREG C+CND+W
Sbjct: 657 IKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 174/371 (46%), Gaps = 27/371 (7%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N + + + CC + G Q H +L+ G L + L+ +YS A ++
Sbjct: 127 NEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQIL 186
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP-DDVTCLLVLQACAHLG 147
D +P D ++N ++S + + +A + L R C D VT + VL CA +
Sbjct: 187 DTVPGDDVFSYNSILSALVESGCRGEAAQV---LKRMVDECVIWDSVTYVSVLGLCAQIR 243
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
L+ G +IH + + G + + ++LI Y KCG + A + F G+ +++VV+W+A+++
Sbjct: 244 DLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLT 303
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS----KD 263
NGH + + F M+ P++ TF +L+AC+ + G + R+ K+
Sbjct: 304 AYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKN 363
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
I+ N ++++ ++G +D +Y + ++M + D W ++ + H LG++
Sbjct: 364 HLIVGN-----ALINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMICG---YSHHGLGKQ 414
Query: 324 VIEHLIE-LKAQESGDYVLLLNLYSSVGDWEKVKE--------LREFMNEKGLQ-TTPGC 373
+ + + A E +YV + + S+ V+E +++F E GL+ T
Sbjct: 415 ALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMV 474
Query: 374 STIGLKGVVHE 384
+ +G G++ E
Sbjct: 475 ALLGRAGLLDE 485
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 10/263 (3%)
Query: 30 PFACSFA-IKCCMKFC----SLMGGLQIHAR-VLRDGYQLDSQL--MTTLMDLYSTFEKS 81
P CS + +KF SL G IHA+ V+R+ DS + + +L++LYS +S
Sbjct: 18 PHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQS 77
Query: 82 FEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQ 141
A KLFD + QR+ V+W+ L+ Y+ + L LF NL +S P++ +VL
Sbjct: 78 KCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSA-YPNEYIFTIVLS 136
Query: 142 ACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS 201
CA G ++ G++ H Y+ + G + N+LI MYS+C + A ++ +P DV S
Sbjct: 137 CCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFS 196
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
+++++S L +G +A + M V D T+ VL C+ + G+ ++
Sbjct: 197 YNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLL 256
Query: 262 KDFGILPNIHHYGCVVDLLGRAG 284
K G++ ++ ++D G+ G
Sbjct: 257 KT-GLVFDVFVSSTLIDTYGKCG 278
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + EE LF KM + N F + + C +L G +H R++ G
Sbjct: 301 VLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSG 360
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + L+++YS + +F + RD + WN +I Y + + AL +F
Sbjct: 361 FKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQ 420
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALE-----FGEKIHRYISEHGYGSKMNLCNSLI 175
++ +G P+ VT + VL AC HL ++ F + + ++ E G + ++
Sbjct: 421 DM--MSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPG----LEHYTCMV 474
Query: 176 AMYSKCGSLGMAFEVFKGMPEK--DVVSWSAMISG 208
A+ + G L A K + DVV+W +++
Sbjct: 475 ALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNA 509
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 292/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A+ S E +L M+ + + + A+ C +L G IH+ ++ G
Sbjct: 375 IIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESG 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDALCLF 119
+ D L ++D+Y + + + +A ++F + RD V+WN +I+ Y R + +AL LF
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLF 494
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G PD ++ + L ACA +L G+ +H I E G S M + N+++ MY+
Sbjct: 495 QQM--QLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYA 552
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K GSL +A ++F MP DV+SW+ MIS A +GH + F M G P+D TF
Sbjct: 553 KSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVS 612
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDF-GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
V+SACSH GLV +G+ + DF I P HY C+VDL+ RAG LD A + I + +
Sbjct: 613 VVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPL 672
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KPD I T+LGA ++HK V + EHL+EL S YV+L NLY VG ++ ++
Sbjct: 673 KPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKI 732
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M EK ++ P S+I +K VHEF D ++ R EI + L+ ++ ++ AGY +
Sbjct: 733 RRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDT 792
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
T LH++G E+K LSYHSEKLAIAFG+++T PGT++R+ KNLR+C DCH K +S +
Sbjct: 793 TLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKI 852
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 853 TGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 11/315 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSL----MGGLQIHARV 56
M+ AY+ E+ +F M + + + C K L + L + R
Sbjct: 172 MITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER- 230
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ DS T L++ Y + +A + F + + + +I+ Y + +R +AL
Sbjct: 231 -EHDHLHDSSFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEAL 288
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + E G K D + C+ VL AC+ LE G IH ++ E + +N N+LI
Sbjct: 289 ELFKVMLLE--GVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALIN 346
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGSL A EVF+ M +DV+SW+ +I+ + +A+ MQ GV D +
Sbjct: 347 MYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKIS 406
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F L C+ + +G M + + GI ++ ++D+ G D A ++ +M
Sbjct: 407 FVNALPLCAASEALAKGRMIHSWIVES-GIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 297 GVKPDSTIWRTLLGA 311
+ D W ++ A
Sbjct: 466 KAR-DQVSWNAMITA 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL G ++HAR+ + + L+ +Y +A FD +P +D + W LI
Sbjct: 13 SLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIR 72
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC-AHLGALEFGEKIHRYISEHG 163
+ + + AL LF ++ E G P + + VL AC A LE G +IH +
Sbjct: 73 AHGQIGDSEQALHLFRSMQLE--GVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTA 130
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
S + +L+ MY KC S+ A +VF G+ K VV W+AMI+ A H AI+ F
Sbjct: 131 MESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFY 190
Query: 224 AMQRAGVFPDDQTFTGVLSACS 245
AM GV + TF GVL ACS
Sbjct: 191 AMLLEGVKAERITFIGVLDACS 212
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L A +L+ G+++H I + + + L+ MY CGSL A F MP +D
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-HCGLVDE----- 252
++W+ +I G A+ F +MQ GV P ++ F VL ACS L++E
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123
Query: 253 GMMFLDRMSKDFGILPN-IHHYG------------------------CVVDLLGRAGLLD 287
G++ M D + +H YG ++ + +
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183
Query: 288 QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV---IEHLIELKAQESGDYVL 341
QA Q+ +M GVK + + +L AC K + + + V +E +S
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243
Query: 342 LLNLYSSVGDWEK 354
L+N Y S GD E+
Sbjct: 244 LVNFYGSCGDLEQ 256
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 195/513 (38%), Positives = 300/513 (58%), Gaps = 10/513 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + L+++M K + F + + L+GG Q H ++++ G
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 61 YQLDSQLMTTLMDLYSTF---EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDAL 116
+ +S + + L+D YS + +++ K+F EI D V WN +IS Y N+ + +A+
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAV 330
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLI 175
F + R G +PDD + + V AC++L + ++IH I H +++++ N+LI
Sbjct: 331 KSFRQMQR--IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALI 388
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
++Y K G+L A VF MPE + VS++ MI G A +GHG +A+ + M +G+ P+
Sbjct: 389 SLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKI 448
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF VLSAC+HCG VDEG + + M + F I P HY C++DLLGRAG L++A + I +
Sbjct: 449 TFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA 508
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M KP S W LLGACR HK++ L ER L+ ++ + YV+L N+Y+ WE++
Sbjct: 509 MPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEM 568
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M K ++ PGCS I +K H FV +D SHP I E+ + L+E+ K++K GYV
Sbjct: 569 ASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Query: 416 AEITSELHNLGAEEKGNA---LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
+ + +G+ L +HSEKLA+AFG+++T G + V KNLRIC DCHN
Sbjct: 629 MDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAI 688
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V RE+I+RD LRFH F++G+CSC DYW
Sbjct: 689 KFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
++ Y+ K A +LFDEIPQ DTV++N LIS Y + T A+ LF + + G
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK--LG 135
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+ D T ++ AC ++ +++H + G+ S ++ N+ + YSK G L A
Sbjct: 136 FEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 189 EVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
VF GM E +D VSW++MI + G A+ + M G D T VL+A +
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY--QLITSMGVKPDSTIW 305
+ G F ++ K G N H ++D + G D Y + + + PD +W
Sbjct: 254 DHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 306 RTLLGACRIHKHVT 319
T++ +++ ++
Sbjct: 313 NTMISGYSMNEELS 326
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 79/206 (38%), Gaps = 54/206 (26%)
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG-------------------------- 185
G+ +H + S L N + +YSKCG L
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 186 -----MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA------MQRAGVFPDD 234
+A ++F +P+ D VS++ +ISG A DA E+F A M++ G D
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYA------DARETFAAMVLFKRMRKLGFEVDG 140
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV----VDLLGRAGLLDQAY 290
T +G+++AC C VD L + F + Y V V + GLL +A
Sbjct: 141 FTLSGLIAAC--CDRVD-----LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHK 316
+ M D W +++ A HK
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHK 219
>gi|357131197|ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Brachypodium distachyon]
Length = 648
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 291/524 (55%), Gaps = 49/524 (9%)
Query: 30 PFACSFAIKCCMKFCSLMGGLQIHA----------RVLRDGYQLDSQLMTTLMD------ 73
P A + C F SL+ G +HA R+ G + D+ + TL+
Sbjct: 126 PLASTPPATLCTAFNSLISGCALHALPAACFALFRRMRVAGVRFDAVTLLTLVPAAPPSV 185
Query: 74 ----------------------LYSTFEKSFEAC--KLFDEIP--QRDTVAWNVLISCYI 107
L S + + A ++FDE+P RD V+WN ++S +
Sbjct: 186 VPQLHALAARAGLAAETSVANCLISVYARRGAALARQVFDEMPAASRDLVSWNAVLSAHS 245
Query: 108 RNQRTRDALCLFDNLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH--GY 164
+N DAL L+ + + G +PD VT + VL +CAHLGA G + RY+ G+
Sbjct: 246 QNGLAVDALDLYSRMRGCDGHGVEPDAVTLVSVLSSCAHLGARSVGLGVERYMRGKLPGF 305
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ + LCN+LI Y++CG L A ++F MP K +VSW+A+I+G M+GHG AI F
Sbjct: 306 RTNVQLCNALINFYARCGCLPQAQQLFNEMPRKSIVSWTALITGYGMHGHGEVAINLFQT 365
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M G+ PD+ G+LSACSH G+ DEG + M + + P + HY C+VDLLGRAG
Sbjct: 366 MVSEGIRPDNVAMVGLLSACSHAGMYDEGRKYFSAMESAYQLRPTLEHYTCMVDLLGRAG 425
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
L +A +LI+SM + D +W LLGAC+IHK+V +GE EH+IE++ G YVL+ N
Sbjct: 426 RLKEARELISSMPMPADGAVWGALLGACKIHKNVEIGEEAFEHVIEVEPTNVGYYVLMAN 485
Query: 345 LYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE 404
+Y+ G + V +R M E+GL+ PGCS + KG VH F+ DD SHP+ IY+++ +
Sbjct: 486 IYTDTGQLDCVVRVRAMMRERGLKKEPGCSYVEHKGRVHLFMADDHSHPQAKRIYELVLK 545
Query: 405 INKQL--KIAGYVAEITSELHNLGAEEKGNAL-SYHSEKLAIAFGVLATPPGTTIRVAKN 461
+ + + K G V + +E+ L +HSEKLA+AFG+L T G+ I V KN
Sbjct: 546 LEQMVKEKTDGTVGIQGGRMIEGHSEKTAVPLIGFHSEKLAVAFGMLNT-VGSEIAVIKN 604
Query: 462 LRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
LR+C +CH+F K +S + NR ++RD RFH F +G CSC DYW
Sbjct: 605 LRVCGNCHSFLKTVSAIANRVFLVRDASRFHRFEDGACSCKDYW 648
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 286/505 (56%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + +P+E +F+KM + + + A+ C L G IH + G
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ +L+ +Y ++ A +F ++ R V+WN +I + +N R DAL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ KPD T + V+ A A L + IH + + + +L+ MY+K
Sbjct: 428 QMRSRT--VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ +A +F M E+ V +W+AMI G +G G+ A+E F MQ+ + P+ TF V
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SACSH GLV+ G+ M +++ I ++ HYG +VDLLGRAG L++A+ I M VKP
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +LGAC+IHK+V E+ E L EL + G +VLL N+Y + WEKV ++R
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +GL+ TPGCS + +K VH F +HP +IY L+++ +K AGYV + T+
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD-TN 724
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ + + K LS HSEKLAI+FG+L T GTTI V KNLR+C DCHN K +S V
Sbjct: 725 LVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTG 784
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF+ G CSC DYW
Sbjct: 785 REIVVRDMQRFHHFKNGACSCGDYW 809
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 158/292 (54%), Gaps = 3/292 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M++ ++ S ++ F +MR + + ++ +K C L G +IH +++ G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD MT L ++Y+ + EA K+FD +P+RD V+WN +++ Y +N R AL +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E KP +T + VL A + L + G++IH Y G+ S +N+ +L+ MY+K
Sbjct: 226 SMCEE--NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A ++F GM E++VVSW++MI N + ++A+ F M GV P D + G
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
L AC+ G ++ G F+ ++S + G+ N+ ++ + + +D A +
Sbjct: 344 LHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 291/510 (57%), Gaps = 6/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + EE LF +M + +P S + C + + G +H V++
Sbjct: 346 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV-LPACARSEAFAGKEAVHGYVVK 404
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + LMD+Y+ K+ A ++F + D V+WN LI+ + DA L
Sbjct: 405 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 464
Query: 119 FDNLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ + EE G P+ +T + +L CA L A G++IH Y H + + + ++L+ M
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQT 236
Y+KCG L ++ VF +P ++ ++W+ +I M+G G +A F M +G P++ T
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 584
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F L+ACSH G+VD G+ M +D G+ P CVVD+LGRAG LD+AY ++TSM
Sbjct: 585 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 644
Query: 297 GV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ + W T+LGACR+H++V LGE E L+EL+ +E+ YVLL N+YS+ G W +
Sbjct: 645 ETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 704
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
E+R M +G+ PGCS I + G +H F+ + +HP E++ ++ + ++ GY
Sbjct: 705 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYT 764
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + LH++ +K L HSEKLAIAFG+L PG TIRVAKNLR+C DCH AK L
Sbjct: 765 PDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFL 824
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + RE+++RD RFHHFR G+CSC DYW
Sbjct: 825 SKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 14/280 (5%)
Query: 49 GLQIHARVLRDGYQLDSQ--LMTTLMDLYSTFEKSFEACKLF-DEIPQR-DTVAWNVLIS 104
G + HA L++G Q L+ +Y+ +A +LF P R D V WN ++S
Sbjct: 185 GREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVS 244
Query: 105 CYIRNQRTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEH 162
+++ +A+ L+D + G +PD VT L AC+ L L+ G ++H Y I +
Sbjct: 245 VLVQSGMFDEAVQTLYDMV---ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 301
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIE 220
+ + ++L+ MY+ +G A +VF +P+ K + W+AMI G A G +A+
Sbjct: 302 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 361
Query: 221 SFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M+ AG P + T VL AC+ G + G+ N ++D+
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDM 420
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
R G D A + I +M PD W TL+ C + HV
Sbjct: 421 YARLGKTDVARR-IFAMVDLPDVVSWNTLITGCVVQGHVA 459
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDG--YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
AIK IHA LR G ++ + L+ Y+ + A ++F I
Sbjct: 63 AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 122
Query: 94 --RDTVAWNVLISCYIRNQRTRDALCLFDNLNREES-------GCKP-DDVTCLLVLQAC 143
D V++N LIS ALCLF + + G P T + VL+A
Sbjct: 123 SAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAV 172
Query: 144 AHL----GALEFGEKIHRYISEHG--YGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-MPE 196
+HL A+ G + H + ++G +G + N+L++MY++ G + A +F G P
Sbjct: 173 SHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 232
Query: 197 K-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+ DVV+W+ M+S L +G +A+++ M GV PD TF L ACS L+D G
Sbjct: 233 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 292
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+ KD + N +VD+ + +A Q+ + PDS
Sbjct: 293 MHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV---PDS 336
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 265/443 (59%), Gaps = 7/443 (1%)
Query: 64 DSQLMTTLMDLYS--TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D+ M +L+ S T E +F ++ ++ V+WNV+I Y++N +A+ L+
Sbjct: 241 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSG 300
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ E G +PD V+ VL AC AL G+KIH YI + L N+LI MY+KC
Sbjct: 301 M--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 358
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF+ M +DVVSW+AMIS +G G DA+ F MQ +G+ PD F L
Sbjct: 359 GCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTL 418
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+ACSH GL++EG M+ + I P + H C+VDLLGRAG + +AY+ I M ++P+
Sbjct: 419 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPN 478
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+W LLGACR+H + +G + L +L ++SG YVLL N+Y+ G WE+V +R
Sbjct: 479 ERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 538
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M KGL+ PG S + + ++H F+V D SHP+ EIY+ LD + K++K GYV + S
Sbjct: 539 MKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESA 598
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATP---PGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E+K L+ HSEKLAI F ++ T IR+ KNLRIC DCH AK++S +
Sbjct: 599 LHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQI 658
Query: 479 YNREVIIRDRLRFHHFREGRCSC 501
+RE+IIRD RFH FR G CSC
Sbjct: 659 TSREIIIRDTNRFHVFRFGVCSC 681
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 170/337 (50%), Gaps = 16/337 (4%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H+R++ + + +S L LM Y++ + A K+FDEIP+R+ + NV+I Y+ N
Sbjct: 62 VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121
Query: 112 TRDALCLFDNLNREESGC--KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
R+ + +F + C KPD T VL+AC+ G + G+KIH ++ G S +
Sbjct: 122 YREGIQVFGTM----CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLF 177
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N L++MY KCG L A V M +DVVSW+++++G A N DA+E M+
Sbjct: 178 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVK 237
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ D T +L A S+ E +M++ M G ++ + ++ + + + +A
Sbjct: 238 ISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEA 294
Query: 290 YQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLN 344
+L + M G +PD+ ++L AC ++LG++ I IE K + L++
Sbjct: 295 VELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALID 353
Query: 345 LYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
+Y+ G ++ +++ E M + + + T S G G
Sbjct: 354 MYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSG 390
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 41/313 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R+Y + EG +F M + + + +K C +++ G +IH + G
Sbjct: 112 MIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVG 171
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+ +Y EA + DE+ +RD V+WN L++ Y +NQR DA
Sbjct: 172 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDA----- 226
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L+ C + +++ H G+ SL+ S
Sbjct: 227 -------------------LEVCREMESVKIS---------HDAGT----MASLLPAVSN 254
Query: 181 CGSLGMAF--EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ + + ++F M +K +VSW+ MI N +A+E + M+ G PD + T
Sbjct: 255 TTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSIT 314
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL AC + G + + ++PN+ ++D+ + G LD+A + +M
Sbjct: 315 SVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLDRARDVFENMKS 373
Query: 299 KPDSTIWRTLLGA 311
+ D W ++ A
Sbjct: 374 R-DVVSWTAMISA 385
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y ++ P E L+ M + + + + C +L G +IH + R
Sbjct: 281 MIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 340
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L+D+Y+ A +F+ + RD V+W +IS Y + R DA+ LF
Sbjct: 341 LIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 400
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ ++SG PD + + L AC+H G LE G + +++H ++ ++ +
Sbjct: 401 KM--QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 458
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G + A++ + MP E + W A++
Sbjct: 459 RAGKVKEAYKFIQEMPMEPNERVWGALL 486
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/440 (40%), Positives = 260/440 (59%), Gaps = 2/440 (0%)
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
+ L+D Y+ + A LFDE+P+RD V W L++ R+ AL ++ ++
Sbjct: 78 HVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMV-- 135
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
SG +PD+ L +CA LE G+ +H G +++ NSL++MY+K GSL
Sbjct: 136 ASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLR 195
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +VF + V+W+A+I G A NG G ++++ + M +G PD TF G+L ACS
Sbjct: 196 EARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACS 255
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
H GLVD G M D GI P HY C+VD+LGRAG LD+A +L+ +K D+T+W
Sbjct: 256 HAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVW 315
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
+ LLGACR H++ L ER E + L ++ Y++L NLYS W V +R M +
Sbjct: 316 KALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTLMKSR 375
Query: 366 GLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL 425
G+ PGCS + GV H F V+D HPR +EIY+ ++E+ ++++ G+VA+ L +
Sbjct: 376 GIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVADTDWALQDE 435
Query: 426 GAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVII 485
E + L++HSE+LA+AFG+LA P G +RV KNLR+C DCH K+++ VY RE+I+
Sbjct: 436 APEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVAKVYGREIIL 495
Query: 486 RDRLRFHHFREGRCSCNDYW 505
RD FHH R+G CSC DYW
Sbjct: 496 RDSNCFHHMRDGVCSCGDYW 515
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 8 SSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQL 67
S S + ++ M + + + + A+ C +L G +HA +R G + +
Sbjct: 121 SGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSV 180
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+L+ +Y+ EA K+FD R V W LI Y +N R ++L ++ + S
Sbjct: 181 GNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMV--HS 238
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGM 186
GC+PD VT + +L AC+H G ++ G + + ++HG + ++ + + G L
Sbjct: 239 GCRPDYVTFIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDE 298
Query: 187 AFEVFKGMPEK-DVVSWSAMI 206
A E+ K D W A++
Sbjct: 299 AMELLDQSTMKLDATVWKALL 319
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
VA+N IS R + AL LF + R G D+ T +L + A L + +H
Sbjct: 7 VAYNAAISRCSRAGLHQRALALFHEM-RAARGLPADEYTFPPILNSAALLRVPAAADALH 65
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
+ G + +++ N+L+ Y+K G A +F MP +DVV+W+++++GLA +G
Sbjct: 66 ALLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHD 125
Query: 217 DAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCV 276
A+ + M +GV PD+ LS+C+ ++ G + + G+ P + +
Sbjct: 126 AALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQS-VHATAVRLGLEPFLSVGNSL 184
Query: 277 VDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V + + G L +A ++ + ++ T W L+
Sbjct: 185 VSMYAKTGSLREARKVFDATRLRCPVT-WTALI 216
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/445 (41%), Positives = 266/445 (59%), Gaps = 9/445 (2%)
Query: 64 DSQLMTTLMDLYS--TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
D+ M +L+ S T E +F ++ ++ V+WNV+I Y++N +A+ L+
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC 181
+ E G +PD V+ VL AC AL G+KIH YI + L N+LI MY+KC
Sbjct: 300 M--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
G L A +VF+ M +DVVSW+AMIS +G G DA+ F +Q +G+ PD F L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+ACSH GL++EG M+ + I P + H C+VDLLGRAG + +AY+ I M ++P+
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREF 361
+W LLGACR+H +G + L +L ++SG YVLL N+Y+ G WE+V +R
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 362 MNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSE 421
M KGL+ PG S + + ++H F+V D SHP+ +EIY+ LD + K++K GYV + S
Sbjct: 538 MKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESA 597
Query: 422 LHNLGAEEKGNALSYHSEKLAIAFGVLATP-----PGTTIRVAKNLRICVDCHNFAKVLS 476
LH++ E+K L+ HSEKLAI F ++ T TIR+ KNLRIC DCH AK++S
Sbjct: 598 LHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLIS 657
Query: 477 GVYNREVIIRDRLRFHHFREGRCSC 501
+ +RE+IIRD RFH FR G CSC
Sbjct: 658 QITSREIIIRDTNRFHVFRFGVCSC 682
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 168/337 (49%), Gaps = 16/337 (4%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H+R++ + + +S L LM Y++ + A K+FDEIP+R+ + NV+I Y+ N
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 112 TRDALCLFDNLNREESGC--KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ + +F + GC +PD T VL+AC+ G + G KIH ++ G S +
Sbjct: 121 YGEGVKVFGTM----CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N L++MY KCG L A V M +DVVSW++++ G A N DA+E M+
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ D T +L A S+ E +M++ M G ++ + ++ + + + +A
Sbjct: 237 ISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEA 293
Query: 290 YQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLN 344
+L + M G +PD+ ++L AC ++LG++ I IE K + L++
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK-IHGYIERKKLIPNLLLENALID 352
Query: 345 LYSSVGDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
+Y+ G EK +++ E M + + + T S G G
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y ++ P E L+ +M + + + + C +L G +IH + R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L L+D+Y+ +A +F+ + RD V+W +IS Y + R DA+ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
L ++SG PD + + L AC+H G LE G + +++H ++ ++ +
Sbjct: 400 KL--QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMI 206
+ G + A+ + M E + W A++
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 127/317 (40%), Gaps = 49/317 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
M+R+Y + EG +F M N + C +K CS G G +IH
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTM----CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ G + L+ +Y EA + DE+ +RD V+WN L+ Y +NQR DA
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA- 225
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
L+ C + +++ H G+ SL+
Sbjct: 226 -----------------------LEVCREMESVKIS---------HDAGT----MASLLP 249
Query: 177 MYSKCGSLGMAF--EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
S + + + ++F M +K +VSW+ MI N +A+E + M+ G PD
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
+ T VL AC + G + + ++PN+ ++D+ + G L++A +
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 295 SMGVKPDSTIWRTLLGA 311
+M + D W ++ A
Sbjct: 369 NMKSR-DVVSWTAMISA 384
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 299/540 (55%), Gaps = 36/540 (6%)
Query: 1 MVRAYSMSS-SPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M++A+S+S S +F + Q + N ++ FA C + G Q+ ++
Sbjct: 84 MIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVK 143
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + ++ L+ +Y + E+ K+F RD +WN LI+ Y+ + A L
Sbjct: 144 VGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKEL 203
Query: 119 FDNLNREES-----------------------------GCKPDDVTCLLVLQACAHLGAL 149
FD + + G KP++ T + L AC++L AL
Sbjct: 204 FDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVAL 263
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSWSAMISG 208
+ G+ IH YI + L S+I MY+KCG + A VF + ++ V W+AMI G
Sbjct: 264 DQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGG 323
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
AM+G +AI F M+ + P+ TF +L+ACSH +V+EG ++ M D+ I P
Sbjct: 324 FAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITP 383
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
I HYGC+VDLL R+GLL +A +I+SM + PD IW LL ACRI+K + G R+ +
Sbjct: 384 EIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRII 443
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE--KGLQTTPGCSTIGLKGVVHEFV 386
+ G +VLL N+YS+ G W + + LRE NE + + PGCS+I LKG H+F+
Sbjct: 444 KGMDPNHIGCHVLLSNIYSTSGRWNEARILRE-KNEISRDRKKIPGCSSIELKGTFHQFL 502
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAF 445
V D SHP+ EIY LDE+ +LK AGYV E+ LH++ EE K ALS HSEKLAIAF
Sbjct: 503 VGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETALSVHSEKLAIAF 562
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G++ T GT IR+ KNLR+C DCH K +S VYNR +I+RDR R+HHF +G CSC DYW
Sbjct: 563 GLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 144/327 (44%), Gaps = 36/327 (11%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY-IRN 109
Q HA+++ L+ L + S+ A KLFD+IPQ D +N +I + +
Sbjct: 34 QTHAQLITTALISHPVSANKLLKLAACASLSY-AHKLFDQIPQPDLFIYNTMIKAHSLSP 92
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
++L +F +L ++ G P+ + + AC + ++ GE++ + + G + +
Sbjct: 93 HSCHNSLIVFRSLT-QDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVF 151
Query: 170 LCNSLIAMYSKCGSLG-------------------------------MAFEVFKGMPEKD 198
+ N+LI MY K G +G +A E+F GM E+D
Sbjct: 152 VVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERD 211
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSWS +I+G G +A++ F M + G P++ T L+ACS+ +D+G
Sbjct: 212 VVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHA 271
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
+ K I N ++D+ + G ++ A ++ VK +W ++G +H
Sbjct: 272 YIGKG-EIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMP 330
Query: 319 TLGERVIEHL-IELKAQESGDYVLLLN 344
V E + +E + ++ LLN
Sbjct: 331 NEAINVFEQMKVEKISPNKVTFIALLN 357
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 291/510 (57%), Gaps = 6/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + EE LF +M + +P S + C + + G +H V++
Sbjct: 348 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV-LPACARSEAFAGKEAVHGYVVK 406
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + LMD+Y+ K+ A ++F + D V+WN LI+ + DA L
Sbjct: 407 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 466
Query: 119 FDNLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ + EE G P+ +T + +L CA L A G++IH Y H + + + ++L+ M
Sbjct: 467 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 526
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQT 236
Y+KCG L ++ VF +P ++ ++W+ +I M+G G +A F M +G P++ T
Sbjct: 527 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 586
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F L+ACSH G+VD G+ M +D G+ P CVVD+LGRAG LD+AY ++TSM
Sbjct: 587 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 646
Query: 297 GV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ + W T+LGACR+H++V LGE E L+EL+ +E+ YVLL N+YS+ G W +
Sbjct: 647 ETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 706
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
E+R M +G+ PGCS I + G +H F+ + +HP E++ ++ + ++ GY
Sbjct: 707 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYT 766
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + LH++ +K L HSEKLAIAFG+L PG TIRVAKNLR+C DCH AK L
Sbjct: 767 PDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFL 826
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + RE+++RD RFHHFR G+CSC DYW
Sbjct: 827 SKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 14/280 (5%)
Query: 49 GLQIHARVLRDGYQLDSQ--LMTTLMDLYSTFEKSFEACKLF-DEIPQR-DTVAWNVLIS 104
G + HA L++G Q L+ +Y+ +A +LF P R D V WN ++S
Sbjct: 187 GREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVS 246
Query: 105 CYIRNQRTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEH 162
+++ +A+ L+D + G +PD VT L AC+ L L+ G ++H Y I +
Sbjct: 247 VLVQSGMFDEAVQTLYDMV---ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 303
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIE 220
+ + ++L+ MY+ +G A +VF +P+ K + W+AMI G A G +A+
Sbjct: 304 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 363
Query: 221 SFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M+ AG P + T VL AC+ G + G+ N ++D+
Sbjct: 364 LFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDM 422
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
R G D A ++ + + PD W TL+ C + HV
Sbjct: 423 YARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVA 461
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDG--YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
AIK IHA LR G ++ + L+ Y+ + A ++F I
Sbjct: 65 AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 124
Query: 94 --RDTVAWNVLISCYIRNQRTRDALCLFDNLNREES-------GCKP-DDVTCLLVLQAC 143
D V++N LIS ALCLF + + G P T + VL+A
Sbjct: 125 SAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAV 174
Query: 144 AHL----GALEFGEKIHRYISEHG--YGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-MPE 196
+HL A+ G + H + ++G +G + N+L++MY++ G + A +F G P
Sbjct: 175 SHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 234
Query: 197 K-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+ DVV+W+ M+S L +G +A+++ M GV PD TF L ACS L+D G
Sbjct: 235 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 294
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+ KD + N +VD+ + +A Q+ + PDS
Sbjct: 295 MHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV---PDS 338
>gi|115440727|ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza sativa Japonica Group]
Length = 646
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/464 (40%), Positives = 275/464 (59%), Gaps = 10/464 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE--ACKLFDEIPQ--RDTVAWNVLISCY 106
Q+HA R G ++ + L+ +Y+ A ++F+E+P+ RD V+WN +IS +
Sbjct: 184 QLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMPRASRDLVSWNAVISAH 243
Query: 107 IRNQRTRDALCLFDNLNREESG-CKPDDVTCLLVLQACAHLGALEFGEKIHRYISE--HG 163
+N +A+ L+ + E G +PD VT + VL +CAH GA G + RY+ + G
Sbjct: 244 AQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGARRVGLDVERYVRDTIPG 303
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ + LCN+LI +++CGSL A E+F MPE+ VVSW+ +I G M+G G A++ F
Sbjct: 304 FRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVVSWTTLIIGYGMHGQGDIAVDLFE 363
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M PD G+LSACSH G+ DEG + M +D+ + P + HY C+VDLLGRA
Sbjct: 364 TMVSEATAPDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRA 423
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
G LD+A +LI SM + D +W LLGAC+IHK+V +GE E ++ L+ G YVL+
Sbjct: 424 GRLDEARELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMA 483
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y+ G + V ++R M +GL+ PGCS + KG VH F+ DD SHP+ IY+++
Sbjct: 484 NIYADAGQLDGVAKVRAAMRRRGLRKEPGCSYVEHKGKVHLFMADDHSHPQARRIYELVV 543
Query: 404 EINKQL--KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKN 461
E+ + + K G V E +E A + +HSEKLA+AFG+L T G+ I V KN
Sbjct: 544 ELERMVKEKTGGDVVEERAEKAVAEAAAV-PLVGFHSEKLAVAFGLLNTEAGSEIVVIKN 602
Query: 462 LRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
LR+C DCH+F K +S + NR ++RD RFH F G CSC DYW
Sbjct: 603 LRVCGDCHSFLKTISELTNRAFLVRDASRFHRFENGACSCRDYW 646
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 161/351 (45%), Gaps = 29/351 (8%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EA 84
P + A A+ C K G QIHA + G S L S A
Sbjct: 54 PPHALALPAAVISCAKLHLASGVAQIHALAAKRGLLPSSDAYLLSALLSSYSRLRLLPLA 113
Query: 85 CKLFDEIPQRDT------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
+L DE+P T A+N LIS + LF + R +G + D VT LL
Sbjct: 114 RQLLDELPLASTPPATARTAFNSLISGCALHGVPAGCFSLFRRM-RVAAGVRFDAVT-LL 171
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG--MAFEVFKGMPE 196
L A LG + ++H + G + ++ N L+++Y++ G G +A +VF+ MP
Sbjct: 172 ALVPVAPLGIV---PQLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMPR 228
Query: 197 --KDVVSWSAMISGLAMNGHGRDAIESFGAM---QRAGVFPDDQTFTGVLSACSHCGLVD 251
+D+VSW+A+IS A NG +A+E + M + GV PD T GVLS+C+H G
Sbjct: 229 ASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGARR 288
Query: 252 EGMMFLDRMSKDF--GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRT 307
G + ++R +D G N+ +++ R G L QA +L M P+ ++ W T
Sbjct: 289 VG-LDVERYVRDTIPGFRDNLPLCNALINFHARCGSLAQAQELFDEM---PERSVVSWTT 344
Query: 308 LLGACRIHKHVTLGERVIEHLI-ELKAQESGDYVLLLNLYSSVGDWEKVKE 357
L+ +H + + E ++ E A +S V LL+ S G +++ ++
Sbjct: 345 LIIGYGMHGQGDIAVDLFETMVSEATAPDSVAMVGLLSACSHAGMYDEGRK 395
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/457 (39%), Positives = 280/457 (61%), Gaps = 4/457 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
++HA+V++ Y+ S + T L+D Y K EA K+F I +D VAW+ +++ Y +
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMN 169
T A+ +F L + G KP++ T +L CA A + G++ H + + S +
Sbjct: 78 ETEAAIKMFGELTK--GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 135
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++L+ MY+K G++ A EVFK EKD+VSW++MISG A +G A++ F M++
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 195
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
V D TF GV +AC+H GLV+EG + D M +D I P H C+VDL RAG L++A
Sbjct: 196 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 255
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
++I +M STIWRT+L ACR+HK LG E +I +K ++S YVLL N+Y+
Sbjct: 256 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 315
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
GDW++ ++R+ MNE+ ++ PG S I +K + F+ D SHP ++IY L++++ +L
Sbjct: 316 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 375
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
K GY + + L ++ E K L+ HSE+LAIAFG++ATP G+ + + KNLR+C DCH
Sbjct: 376 KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCH 435
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHF-REGRCSCNDYW 505
K+++ + RE+++RD RFHHF +G CSC D+W
Sbjct: 436 LVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 291/510 (57%), Gaps = 6/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + EE LF +M + +P S + C + + G +H V++
Sbjct: 346 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV-LPACARSEAFAGKEAVHGYVVK 404
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + LMD+Y+ K+ A ++F + D V+WN LI+ + DA L
Sbjct: 405 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 464
Query: 119 FDNLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ + EE G P+ +T + +L CA L A G++IH Y H + + + ++L+ M
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQT 236
Y+KCG L ++ VF +P ++ ++W+ +I M+G G +A F M +G P++ T
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 584
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F L+ACSH G+VD G+ M +D G+ P CVVD+LGRAG LD+AY ++TSM
Sbjct: 585 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 644
Query: 297 GV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ + W T+LGACR+H++V LGE E L+EL+ +E+ YVLL N+YS+ G W +
Sbjct: 645 EAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 704
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
E+R M +G+ PGCS I + G +H F+ + +HP E++ ++ + ++ GY
Sbjct: 705 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYT 764
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + LH++ +K L HSEKLAIAFG+L PG TIRVAKNLR+C DCH AK L
Sbjct: 765 PDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFL 824
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + RE+++RD RFHHFR G+CSC DYW
Sbjct: 825 SKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 14/280 (5%)
Query: 49 GLQIHARVLRDGYQLDSQ--LMTTLMDLYSTFEKSFEACKLF-DEIPQR-DTVAWNVLIS 104
G + HA L++G Q L+ +Y+ +A +LF P R D V WN ++S
Sbjct: 185 GREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVS 244
Query: 105 CYIRNQRTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEH 162
+++ +A+ L+D + G +PD VT L AC+ L L+ G ++H Y I +
Sbjct: 245 VLVQSGMFDEAVQTLYDMV---ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 301
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIE 220
+ + ++L+ MY+ +G A +VF +P+ K + W+AMI G A G +A+
Sbjct: 302 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 361
Query: 221 SFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M+ AG P + T VL AC+ G + G+ N ++D+
Sbjct: 362 LFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDM 420
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
R G D A + I +M PD W TL+ C + HV
Sbjct: 421 YARLGKTDVARR-IFAMVDLPDVVSWNTLITGCVVQGHVA 459
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDG--YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
AIK IHA LR G ++ + L+ Y+ + A ++F I
Sbjct: 63 AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 122
Query: 94 --RDTVAWNVLISCYIRNQRTRDALCLFDNLNREES-------GCKP-DDVTCLLVLQAC 143
D V++N LIS ALCLF + + G P T + VL+A
Sbjct: 123 SAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAV 172
Query: 144 AHL----GALEFGEKIHRYISEHG--YGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-MPE 196
+HL A+ G + H + ++G +G + N+L++MY++ G + A +F G P
Sbjct: 173 SHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 232
Query: 197 K-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
+ DVV+W+ M+S L +G +A+++ M GV PD TF L ACS L+D G
Sbjct: 233 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 292
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+ KD + N +VD+ + +A Q+ + PDS
Sbjct: 293 MHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV---PDS 336
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 287/495 (57%), Gaps = 4/495 (0%)
Query: 13 EGFYLFEKMRQK--RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E LF +MR++ + N + +K ++ Q+HA + G DS ++
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING 449
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+D Y + A K+F E D ++ +++ + DA+ LF + R+ G +
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRK--GLE 507
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD +L AC L A E G+++H ++ + + S + N+L+ Y+KCGS+ A
Sbjct: 508 PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMA 567
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F G+PE+ +VSWSAMI GLA +GHG+ A++ F M GV P+ T T VLSAC+H GLV
Sbjct: 568 FSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLV 627
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+ + + M + FGI HY C++D+LGRAG L+ A +L+ +M + ++ +W LLG
Sbjct: 628 DDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG 687
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
A R+H+ LG E L L+ ++SG +VLL N Y+S G W+++ ++R+ M + ++
Sbjct: 688 ASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKE 747
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
P S + +K VH F+V D SHP +IY L E+ + AGYV + +LH++ EK
Sbjct: 748 PAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEK 807
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
LS+HSE+LA+AF +++TP G IRV KNLRIC DCH K +S + +RE+IIRD R
Sbjct: 808 ELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINR 867
Query: 491 FHHFREGRCSCNDYW 505
FHHF G CSC DYW
Sbjct: 868 FHHFTNGTCSCGDYW 882
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 15/318 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC--MKFCSLMGGLQIHARVLR 58
+V AYS + P + F MR + +P N FA +KC ++F G Q+HA +
Sbjct: 74 LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF-----GAQVHALAVA 128
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI----PQRDTVAWNVLISCYIRNQRTRD 114
D + L+ +Y F EA ++FDE +R+ V+WN +IS Y++N ++ D
Sbjct: 129 TRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGD 188
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
A+ +F + SG +P++ V+ AC LE G ++H + GY + N+L
Sbjct: 189 AIGVFREM--VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANAL 246
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ MYSK G + MA VF+ MP DVVSW+A ISG +GH A+E M+ +G+ P+
Sbjct: 247 VDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNV 306
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
T + VL AC+ G + G M K G +VD+ + G LD A ++
Sbjct: 307 FTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFD 365
Query: 295 SMGVKPDSTIWRTLLGAC 312
M + D +W L+ C
Sbjct: 366 FMP-RRDLILWNALISGC 382
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 9/312 (2%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L +M+ + N F S +K C + G QIH +++ D + L+D+Y+
Sbjct: 293 LLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYA 352
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A K+FD +P+RD + WN LIS + R + L LF + +E + T
Sbjct: 353 KHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 412
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
VL++ A A+ ++H + G S ++ N LI Y KCG L A +VFK
Sbjct: 413 ASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRS 472
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
D++S + M++ L+ HG DAI+ F M R G+ PD + +L+AC+ ++G
Sbjct: 473 DDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQV 532
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRI 314
+ K ++ +V + G ++ A + + P+ I W ++G
Sbjct: 533 HAHLIKR-QFTSDVFAGNALVYAYAKCGSIEDADMAFSGL---PERGIVSWSAMIGGLAQ 588
Query: 315 HKHVTLGERVIE 326
H H G+R ++
Sbjct: 589 HGH---GKRALD 597
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 16/294 (5%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL G +H+ +L+ G L + L+ LYS A +FDEIP V+W+ L++
Sbjct: 19 SLFAGAHLHSHLLKSG--LLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVT 76
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y N RDAL F + C L V+ CA + FG ++H
Sbjct: 77 AYSNNGMPRDALLAFRAMRGRGVPCNE---FALPVVLKCA--PDVRFGAQVHALAVATRL 131
Query: 165 GSKMNLCNSLIAMYSKCGSLGMA---FEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIE 220
+ + N+L+A+Y G + A F+ + G+ E++ VSW+ MIS N DAI
Sbjct: 132 VHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIG 191
Query: 221 SFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLL 280
F M +G P++ F+ V++AC+ ++ G + + G ++ +VD+
Sbjct: 192 VFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT-GYEKDVFTANALVDMY 250
Query: 281 GRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
+ G ++ A + M D W + C H H R +E L+++K+
Sbjct: 251 SKLGDIEMAATVFEKMPA-ADVVSWNAFISGCVTHGH---DHRALELLLQMKSS 300
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 10/270 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A S E+ LF +M +K + + F S + C + G Q+HA +++
Sbjct: 481 MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ 540
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D L+ Y+ +A F +P+R V+W+ +I ++ + AL LF
Sbjct: 541 FTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFH 600
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G P+ +T VL AC H G ++ +K + E G +I +
Sbjct: 601 RMLDE--GVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILG 658
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A E+ MP + + W A++ ++ RD A ++ +++ T
Sbjct: 659 RAGKLEDAMELVNNMPFQANAAVWGALLGASRVH---RDPELGRMAAEKLFTLEPEKSGT 715
Query: 239 GVLSACSH--CGLVDEGMMFLDRMSKDFGI 266
VL A ++ G+ DE M + ++ KD +
Sbjct: 716 HVLLANTYASAGMWDE-MAKVRKLMKDSNV 744
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 284/488 (58%), Gaps = 30/488 (6%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G + I ++ + + D+ T L+D S K A KLFD++P R+ V+WN +I+ Y+
Sbjct: 192 GEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYM 251
Query: 108 RNQRTRDALCLFDN-----------------LNRE------------ESGCKPDDVTCLL 138
++ AL LF LN + + G +P T +
Sbjct: 252 KSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVS 311
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL A + L L G IH Y+ ++G+ L SLI MY+KCG + A VF+ + +K
Sbjct: 312 VLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKK 371
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V W+A+I GL ++G A+ F M + G+ P+ F GVL+AC+H GLVD+G + D
Sbjct: 372 VGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFD 431
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M ++ I P + HYGC+VD+L RAG L++A I +M + P+ IW +LLG R H +
Sbjct: 432 MMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKI 491
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
+GE + +IE+ + G Y+LL N+Y++ G WEKV +RE M ++G + PGCS++
Sbjct: 492 DIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEH 551
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNL-GAEEKGNALSYH 437
KG +HEF+V D+SHP+ EIY + E+ ++LK G+V + T L + G +EK L H
Sbjct: 552 KGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENH 611
Query: 438 SEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREG 497
SE+LAIAFG++ PG IR+ KNLR+C DCH+ K+LS +Y+RE+I+RD RFHHF+ G
Sbjct: 612 SERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNG 671
Query: 498 RCSCNDYW 505
CSC DYW
Sbjct: 672 SCSCMDYW 679
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 157/331 (47%), Gaps = 16/331 (4%)
Query: 41 MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS--TFEKSFEACKLFDEIPQRDTVA 98
M C+ Q+HA L+ + + L+ LYS A +FD I +R +
Sbjct: 21 MGLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIH 80
Query: 99 WNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY 158
WN +I CY+ NQ + D + LF L E PD+ T V++ CA LG ++ G++IH
Sbjct: 81 WNTIIKCYVENQFSHDGIVLFHELVHEYL---PDNFTLPCVIKGCARLGVVQEGKQIHGL 137
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ G+GS + + SL+ MYSKCG + A +VF GM +KDVV W+++I G A G A
Sbjct: 138 ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIA 197
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
++ F M F ++T ++ S CG V+ D+M N+ + +++
Sbjct: 198 LQLFEEMPERDAF----SWTVLVDGLSKCGKVESARKLFDQMP-----CRNLVSWNAMIN 248
Query: 279 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES-G 337
++G D A +L M + D W ++ ++ ++ +++L ++ S
Sbjct: 249 GYMKSGDFDSALELFYQMPIW-DLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHA 307
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
V +L+ S + K + + +M + G +
Sbjct: 308 TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFE 338
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 174/401 (43%), Gaps = 54/401 (13%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
+++ Y + +G LF ++ + +P N F + C +K C+ +G G QIH
Sbjct: 84 IIKCYVENQFSHDGIVLFHELVHEYLPDN-----FTLPCVIKGCARLGVVQEGKQIHGLA 138
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
L+ G+ D + +L+++YS + A K+FD + +D V WN LI Y R AL
Sbjct: 139 LKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIAL 198
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF+ + D + +++ + G +E K+ + S N++I
Sbjct: 199 QLFEEMPER------DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS----WNAMIN 248
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
Y K G A E+F MP D+V+W+ MI+G +NG DA++ F M + G P T
Sbjct: 249 GYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHAT 308
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDF----GIL------------------------- 267
VLSA S ++ +G M K+ GIL
Sbjct: 309 LVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ 368
Query: 268 -PNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGER 323
+ H+ ++ LG G+ + A L M G+KP++ I+ +L AC V G +
Sbjct: 369 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428
Query: 324 VIEHLI-ELKAQESGD-YVLLLNLYSSVGDWEKVKELREFM 362
+ ++ E K + + + Y L+++ G E+ K E M
Sbjct: 429 YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENM 469
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 270/457 (59%), Gaps = 7/457 (1%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+HA V++ G ++ + T L LY F A + FD +P++ +WN +IS Y +N
Sbjct: 344 LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGL 403
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
T A+ LF + + +P+ +T L ACA LGAL G+ +H+ I+ + +
Sbjct: 404 TEMAVALFQQM--QALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVM 461
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+LI MY KCGS+ A +F M K+VVSW+ MISG ++G G +A++ + M A +
Sbjct: 462 TALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLH 521
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P TF VL ACSH GLV EG M+ D+GI P I H C+VDLLGRAG L +A++
Sbjct: 522 PTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFE 581
Query: 292 LITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
LI+ V P IW LLGAC +HK L + + L EL+ + +G YVLL NLY+S
Sbjct: 582 LISEFPKSAVGPG--IWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTS 639
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
+ + +R+ + L TPGC+ I + H F+ D +HP+ + IY L+++ +
Sbjct: 640 KKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAK 699
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+ AGY + + L+++ EEK + + HSEKLAIAFG+L T PGT IR+ KNLR+C+DC
Sbjct: 700 MIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDC 759
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
HN K++S V R +++RD RFHHFR+G CSC DYW
Sbjct: 760 HNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 167/385 (43%), Gaps = 53/385 (13%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQ-----------IHARVLRDGYQLDSQLMTTLMDLYST 77
+ F+ +FA CS GG+ +HA + G+ D+ + + L LY T
Sbjct: 112 DSFSFAFAATSLASSCS-RGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
+ +A K+FD +P DTV WN L++ +AL F + S +PD T
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLA----GLSGSEALEAFVRMAGAGS-VRPDSTTLA 225
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
VL A A + G +H + + G ++ LI++Y+KCG + A +F M
Sbjct: 226 SVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGP 285
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV-----------LSACSH 246
D+V+++A+ISG ++NG ++E F + G+ P T + L+ C H
Sbjct: 286 DLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLH 345
Query: 247 CGLVDEGMMF-----------------LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLD 287
+V G+ +D + F +P + + ++ + GL +
Sbjct: 346 AHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTE 405
Query: 288 QA---YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL--L 342
A +Q + ++ V+P+ + L AC ++LG + + +I + E YV+ L
Sbjct: 406 MAVALFQQMQALNVRPNPLTISSALSACAQLGALSLG-KWVHKIIANEKLELNVYVMTAL 464
Query: 343 LNLYSSVGDWEKVKELREFMNEKGL 367
+++Y G + + + + M+ K +
Sbjct: 465 IDMYVKCGSIAEARCIFDSMDNKNV 489
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LF++M+ + NP S A+ C + +L G +H + +
Sbjct: 394 MISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEK 453
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+L+ +MT L+D+Y EA +FD + ++ V+WNV+IS Y + + +AL L+
Sbjct: 454 LELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYK 513
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
++ ++ P T L VL AC+H G ++ G + R + S++G + C ++ +
Sbjct: 514 DM--MDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLG 571
Query: 180 KCGSLGMAFEVFKGMPEKDVVS--WSAMI 206
+ G L AFE+ P+ V W A++
Sbjct: 572 RAGQLKEAFELISEFPKSAVGPGIWGALL 600
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+HA + G ++T L+ LY+ A LFD + D V +N LIS Y N
Sbjct: 243 VHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGM 302
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
++ LF L G +P T + ++ + G +H ++ + G + +
Sbjct: 303 VGSSVELFKEL--VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVS 360
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+L +Y + + A F MPEK + SW+AMISG A NG A+ F MQ V
Sbjct: 361 TALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVR 420
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P+ T + LSAC+ G + G ++ ++ + + N++ ++D+ + G + +A
Sbjct: 421 PNPLTISSALSACAQLGALSLG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARC 479
Query: 292 LITSMGVKPDSTIWRTLLGACRIH 315
+ SM K + W ++ +H
Sbjct: 480 IFDSMDNK-NVVSWNVMISGYGLH 502
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 258/442 (58%), Gaps = 4/442 (0%)
Query: 66 QLMTTLMDLYSTFE--KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
+ L+D Y+ + A +FDE+P+RD V W L++ R A+ + +
Sbjct: 81 HVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGM- 139
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
SG +PD+ L +CA AL+ G +H G ++ NSL++MY+K G+
Sbjct: 140 -VASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGA 198
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A VF MP + ++W+A+I G A NG GR ++E + M R+G PD TF G+L A
Sbjct: 199 LRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFA 258
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GLVD G M +GI P HY C+VDLLGRAG LD+A L+ + D+T
Sbjct: 259 CSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDAT 318
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
+W++LLGACR+H++ L ER E + L ++ YV+L NLYS W V +R M
Sbjct: 319 VWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGDVARIRALMK 378
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH 423
+G+ PGCS +G+ G+ H F V+D HPR EIY+ ++E+ +++++ GYV + L
Sbjct: 379 ARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVEEMTERIRVEGYVPDTDWALQ 438
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
+ E + L+YHSE+LA+AFG+LA P IRV KNLR+C DCH K+++ VY RE+
Sbjct: 439 DEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKVYGREI 498
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
I+RD FHH ++G CSC DYW
Sbjct: 499 ILRDANCFHHMKDGECSCGDYW 520
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
+ M + + FA A+ C +L G +HA +R G + + +L+ +Y+
Sbjct: 136 YHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSLVSMYAK 195
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
+A +FD +P R T+ W LI Y +N R R +L ++ ++ R SGC+PD VT +
Sbjct: 196 TGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVR--SGCRPDYVTFI 253
Query: 138 LVLQACAHLGALEFGEKIHR-YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMP 195
+L AC+H G ++ G R + +G + ++ + + G L A ++ +
Sbjct: 254 GLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSST 313
Query: 196 EKDVVSWSAMI 206
E D W +++
Sbjct: 314 ELDATVWKSLL 324
>gi|125528180|gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indica Group]
Length = 646
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/464 (40%), Positives = 276/464 (59%), Gaps = 10/464 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFE--ACKLFDEIPQ--RDTVAWNVLISCY 106
Q+HA R G ++ + L+ +Y+ A ++F+E+P+ RD V+WN +IS +
Sbjct: 184 QLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMPRASRDLVSWNAVISAH 243
Query: 107 IRNQRTRDALCLFDNLNREESG-CKPDDVTCLLVLQACAHLGALEFGEKIHRYISE--HG 163
+N +A+ L+ + E G +PD VT + VL +CAH GA G + +Y+ + G
Sbjct: 244 AQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGARRVGLDVEQYVRDTIPG 303
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
+ + LCN+LI +++CGSL A E+F MPE+ VVSW+A+I G M+G G A++ F
Sbjct: 304 FRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVVSWTALIIGYGMHGQGDIAVDLFE 363
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M PD G+LSACSH G+ DEG + M +D+ + P + HY C+VDLLGRA
Sbjct: 364 TMVSEATAPDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRA 423
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
G LD+A +LI SM + D +W LLGAC+IHK+V +GE E ++ L+ G YVL+
Sbjct: 424 GRLDEARELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMA 483
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y+ G + V ++R M +GL+ PGCS + KG VH F+ DD SHP+ IY+++
Sbjct: 484 NIYADAGQLDGVAKVRAAMRRRGLRKEPGCSYVEHKGKVHLFMADDHSHPQARRIYELVV 543
Query: 404 EINKQL--KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKN 461
E+ + + K G V E +E A + +HSEKLA+AFG+L T G+ I V KN
Sbjct: 544 ELERMVKEKTGGDVVEERAEKAVAEAAAV-PLVGFHSEKLAVAFGLLNTEAGSEIVVIKN 602
Query: 462 LRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
LR+C DCH+F K +S + NR ++RD RFH F G CSC DYW
Sbjct: 603 LRVCGDCHSFLKTISELTNRAFLVRDASRFHRFENGACSCRDYW 646
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 160/351 (45%), Gaps = 29/351 (8%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EA 84
P + A A+ C K G QIHA + G S L S A
Sbjct: 54 PPHALALPAAVISCAKLHLASGVAQIHALAAKRGLLPSSDAYLLSALLSSYSRLRLLPLA 113
Query: 85 CKLFDEIPQRDT------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
+L DE+P T A+N LIS + LF + R +G + D VT LL
Sbjct: 114 RQLLDELPLASTPPATARTAFNSLISGCALHGVPAGCFSLFRRM-RVAAGVRFDAVT-LL 171
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG--MAFEVFKGMPE 196
L A LG + ++H + G + ++ N L+++Y++ G G +A +VF+ MP
Sbjct: 172 ALVPVAPLGIV---PQLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMPR 228
Query: 197 --KDVVSWSAMISGLAMNGHGRDAIESFGAM---QRAGVFPDDQTFTGVLSACSHCGLVD 251
+D+VSW+A+IS A NG +A+E + M + GV PD T GVLS+C+H G
Sbjct: 229 ASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGARR 288
Query: 252 EGMMFLDRMSKDF--GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRT 307
G + +++ +D G N+ +++ R G L QA +L M P+ ++ W
Sbjct: 289 VG-LDVEQYVRDTIPGFRDNLPLCNALINFHARCGSLAQAQELFDEM---PERSVVSWTA 344
Query: 308 LLGACRIHKHVTLGERVIEHLI-ELKAQESGDYVLLLNLYSSVGDWEKVKE 357
L+ +H + + E ++ E A +S V LL+ S G +++ ++
Sbjct: 345 LIIGYGMHGQGDIAVDLFETMVSEATAPDSVAMVGLLSACSHAGMYDEGRK 395
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 297/540 (55%), Gaps = 41/540 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
M+ Y +E + +M I + F I+ C L G Q+HA VLR
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Query: 60 --GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI---------- 107
+ D+ L++ LY K EA +F+++P +D V+WN L+S Y+
Sbjct: 317 DFSFHFDNSLVS----LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 108 ---------------------RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
N + L LF + RE G +P D +++CA L
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE--GFEPCDYAFSGAIKSCAVL 430
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
GA G++ H + + G+ S ++ N+LI MY+KCG + A +VF+ MP D VSW+A+I
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+ L +GHG +A++ + M + G+ PD T VL+ACSH GLVD+G + D M + I
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P HY ++DLL R+G A +I S+ KP + IW LL CR+H ++ LG +
Sbjct: 551 PPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAAD 610
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
L L + G Y+LL N++++ G WE+V +R+ M ++G++ CS I ++ VH F+
Sbjct: 611 KLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFL 670
Query: 387 VDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE-EKGNALSYHSEKLAIAF 445
VDD SHP +Y L ++ K+++ GYV + + LH++ ++ K + L+ HSEK+A+AF
Sbjct: 671 VDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAF 730
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G++ PPGTTIR+ KNLR C DCHNF + LS V R++I+RDR RFHHFR G CSC ++W
Sbjct: 731 GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 184/450 (40%), Gaps = 93/450 (20%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL---------- 50
M+ +S ++ LF KM+ + + F F S++ GL
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFT----------FASVLAGLALVADDEKQC 168
Query: 51 -QIHARVLRDGYQLDSQLMTTLMDLYSTFEKS----FEACKLFDEIPQRDTVAWNVLISC 105
Q HA L+ G + + L+ +YS S A K+FDEI ++D +W +++
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 106 YIRNQRTRDALCLFDNLNRE------------------------------ESGCKPDDVT 135
Y++N L + ++ SG + D+ T
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
V++ACA G L+ G+++H Y+ S + NSL+++Y KCG A +F+ MP
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 196 EKDVVSWSA-------------------------------MISGLAMNGHGRDAIESFGA 224
KD+VSW+A MISGLA NG G + ++ F
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
M+R G P D F+G + +C+ G G + ++ K G ++ ++ + + G
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCG 466
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
++++A Q+ +M DS W L+ A H H V E + LK D + LL
Sbjct: 467 VVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEM--LKKGIRPDRITLLT 523
Query: 345 LYSSVGDWEKVKELREFMN--EKGLQTTPG 372
+ ++ V + R++ + E + PG
Sbjct: 524 VLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 167/416 (40%), Gaps = 82/416 (19%)
Query: 25 RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEA 84
R N +A + + ++ SL +H ++ G+Q + ++ L+D+Y + A
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYA 68
Query: 85 CKLFDEIPQ---------------------------------RDTVAWNVLISCYIRNQR 111
+LFDEI + RDTV +N +I+ + N
Sbjct: 69 RQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNND 128
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNL 170
A+ LF + E G KPD+ T VL A + E + H + G G ++
Sbjct: 129 GYSAINLFCKMKHE--GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV 186
Query: 171 CNSLIAMYSKCGS----LGMAFEVFKGMPEKDVVSWSAMISGLAMNGH------------ 214
N+L+++YSKC S L A +VF + EKD SW+ M++G NG+
Sbjct: 187 SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMD 246
Query: 215 --------------------GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
++A+E M +G+ D+ T+ V+ AC+ GL+ G
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 255 MFLDRM--SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
+ +DF + H +V L + G D+A + M K D W LL
Sbjct: 307 QVHAYVLRREDF----SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGY 361
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
H+ + + + E+K + ++++++ + G E+ +L M +G +
Sbjct: 362 VSSGHIGEAKLIFK---EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 42/244 (17%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
++++ Y G + +A VF+ P +D V ++AMI+G + N G AI F M+ G
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 230 VFPDDQTFTGVLSACS------------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
PD+ TF VL+ + H + G ++ +S L +++ C
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN---ALVSVYS-KCA- 198
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL---IELKAQ 334
LL A ++ + ++ D W T++ + + LGE ++E + ++L A
Sbjct: 199 ---SSPSLLHSARKVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA- 253
Query: 335 ESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ----TTP----GCSTIGLKGV---VH 383
Y +++ Y + G +++ E+ M G++ T P C+T GL + VH
Sbjct: 254 ----YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 384 EFVV 387
+V+
Sbjct: 310 AYVL 313
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/461 (40%), Positives = 276/461 (59%), Gaps = 6/461 (1%)
Query: 1 MVRAYSMSS-SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++R Y+ SS E + +M ++ + + + +K C + G Q H ++
Sbjct: 93 LLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKT 152
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD-TVAWNVLISCYIRNQRTRDALCL 118
G ++ TL+++Y+ + A +F +P D V++N +I+ +R+ R +AL L
Sbjct: 153 GAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVL 212
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + G KP VT VL ACA LGALE G IH Y+ + G S + + +LI MY
Sbjct: 213 FREM--QAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMY 270
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCGSL A +VF+GM +D +WS MI A + +GR+AI F M++ G+ PD TF
Sbjct: 271 GKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFL 330
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVL ACSH G+V EG+ + D M +++GI+P I HYGCV DLL R+G L++AY+ I + +
Sbjct: 331 GVLYACSHSGMVSEGLQYFDSM-REYGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPI 389
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + +WRTLL AC H V LG+RV E ++EL DYV+ NL ++ G WE++ +
Sbjct: 390 QPTAILWRTLLSACGSHGAVDLGKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNRV 449
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ MNEKG+ PGCS+I + VHEF D HP+ + +M+D++ +QLK+ GYV
Sbjct: 450 RKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDGRHPQSQDARRMVDQVIEQLKLVGYVPNT 509
Query: 419 TSELH-NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRV 458
+ H +G EEK +L YHSEKLAI+FG+L T PGTT+RV
Sbjct: 510 SQVFHVEMGEEEKATSLRYHSEKLAISFGLLNTSPGTTLRV 550
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 289/490 (58%), Gaps = 7/490 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +MR+ + N F S + + L+ QIHA++++ YQ + T L+ YS
Sbjct: 391 LFSRMREDNVKPNEFTYSTVLTASIPI--LLP--QIHAQIIKTNYQHAPSVGTALLASYS 446
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+ EA +F I +D VAW+ ++SCY + A +F ++ + G KP++ T
Sbjct: 447 KLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQ--GMKPNEFTI 504
Query: 137 LLVLQACAHLGA-LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+ ACA A ++ G + H ++ Y + + ++L+ MY++ GS+ A VF+
Sbjct: 505 SSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQT 564
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++D+VSW++MISG A +G+ ++A+++F M+ G+ D TF V+ C+H GLV EG
Sbjct: 565 DRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQ 624
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ D M D I P + HY C+VDL RAG LD+ LI M + +WRTLLGACR+H
Sbjct: 625 YFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVH 684
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
K+V LG+ + L+ L+ +S YVLL N+Y++ G W++ E+R+ M+ K ++ GCS
Sbjct: 685 KNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSW 744
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +K VH F+ D SHP +IY L + +LK GY + LH++ E+K L
Sbjct: 745 IQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLV 804
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSE+LA+AFG++ATPP T +++ KNLR+C DCH K++S + +RE+I+RD RFHHF
Sbjct: 805 MHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFN 864
Query: 496 EGRCSCNDYW 505
G CSC D+W
Sbjct: 865 AGACSCGDFW 874
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 32 ACSFAIKCCMKFCSLMGGLQIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDE 90
A S +K C + G Q+H ++ G+ + + + T L+D+Y + +F+
Sbjct: 101 AVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEG 160
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+P+R+ V W L++ Y++ + D + LF + E G P+ T VL A A GA++
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAE--GVWPNPFTFTSVLSAVASQGAVD 218
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G ++H + G S + +CNSLI MYSKCG + A VF+ M +D+VSW+ +++GL
Sbjct: 219 LGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLL 278
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+N H +A++ F + + T++ V+ C++ + L R +
Sbjct: 279 LNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANL-----KQLALARQLHSCVLKHGF 333
Query: 271 HHYG----CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
H G ++D + G LD A+ + M + W ++G C + + L +
Sbjct: 334 HSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFS 393
Query: 327 HLIE 330
+ E
Sbjct: 394 RMRE 397
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 120/228 (52%), Gaps = 3/228 (1%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +MR + + NPF + + ++ G ++HA+ ++ G + + +L+++YS
Sbjct: 188 LFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYS 247
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
EA +F ++ RD V+WN L++ + N+ +AL LF + S K T
Sbjct: 248 KCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFH--DSRASMAKLSQSTY 305
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP- 195
V++ CA+L L ++H + +HG+ S N+ +++ YSKCG L AF +F MP
Sbjct: 306 STVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPG 365
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
++VVSW+AMI G N A F M+ V P++ T++ VL+A
Sbjct: 366 SQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA 413
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 4/197 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMK-FCSLMGGLQIHARVLRD 59
M+ YS + + +F KM + + N F S AI C + G Q HA ++
Sbjct: 472 MLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKY 531
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
YQ + + L+ +Y+ A +F+ RD V+WN +IS Y ++ +++AL F
Sbjct: 532 RYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTF 591
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMY 178
+ E G + D T L V+ C H G ++ G++ + +H M + ++ +Y
Sbjct: 592 RQM--ETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLY 649
Query: 179 SKCGSLGMAFEVFKGMP 195
S+ G L + +GMP
Sbjct: 650 SRAGKLDETMNLIEGMP 666
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 279/507 (55%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV AY+ + P E LF +M + N + C L G +H RV G
Sbjct: 148 MVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQG 207
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + T L++LY + A + F +I +++ VAW+ + + Y RN R RDA+ +
Sbjct: 208 IQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLH 267
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG--SKMNLCNSLIAMY 178
++ E G P+ T + VL ACA + AL+ G +IH I G G S + + +L+ MY
Sbjct: 268 RMDLE--GLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMY 325
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCG+L +A +F + D+V W+++I+ A +G A+E F M+ G+ P TFT
Sbjct: 326 SKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFT 385
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL ACSH G++D+G D GI P H+GC+VDLLGRAG + + L+ M
Sbjct: 386 SVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPF 445
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P W LGACR ++++ E+L +L ++ YVLL N+Y+ G W V +
Sbjct: 446 EPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARM 505
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G S I +K VHEF+ D+ HPRI EI+ L + K +K AGYV +
Sbjct: 506 RQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDT 565
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E K + YHSEKLA+AF +L TP G+ IRV KNLR+C DCH +K +S +
Sbjct: 566 EMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKL 625
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+++RD RFH F+ G CSC DYW
Sbjct: 626 VNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 8/329 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A++ + + + F M + I S + C + G I +L G
Sbjct: 47 MLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTG 106
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +S + T L+ LY +A +F + RD VAW+ +++ Y RN R+AL LF
Sbjct: 107 IEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFR 166
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + G P+ VT + L ACA LG L G +H+ + G S + + +L+ +Y K
Sbjct: 167 QMDLD--GVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGK 224
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E F + EK+VV+WSA+ + A N RDAI M G+ P+ TF V
Sbjct: 225 CGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSV 284
Query: 241 LSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
L AC+ + +G +R+ G+ +++ +V++ + G L A + +
Sbjct: 285 LDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-H 343
Query: 300 PDSTIWRTLLGACRIH----KHVTLGERV 324
D +W +L+ H K + L ER+
Sbjct: 344 LDLVLWNSLIATNAQHGQTEKALELFERM 372
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 40/329 (12%)
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + L L+DLY+ ++ +A +F I ++ +W ++++ + N+ F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G P +V + L AC + G I I G + + +L+++Y
Sbjct: 65 RGMLLQ--GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G A VF M +DVV+WSAM++ A NGH R+A+ F M GV P+ T
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM--- 296
L AC+ G + G + R+ GI + +V+L G+ G ++ A + +
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEK 241
Query: 297 -------------------------------GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
G+ P+ST + ++L AC + G R+
Sbjct: 242 NVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIH 301
Query: 326 EHLIELKAQ-ESGDYVL--LLNLYSSVGD 351
E + L ES YVL L+N+YS G+
Sbjct: 302 ERIHVLGGGLESDVYVLTALVNMYSKCGN 330
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 159 ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDA 218
+ E G+ LCN LI +Y+KC A VF G+ K+V SW+ M++ A N
Sbjct: 1 MEELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRC 60
Query: 219 IESFGAMQRAGVFPDDQTFTGVLSACS 245
F M G+ P + + LSAC+
Sbjct: 61 WLFFRGMLLQGINPGEVGISIFLSACT 87
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 278/498 (55%), Gaps = 7/498 (1%)
Query: 13 EGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E LF +M Q + N F S A K C G Q+ + + G +S + ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ ++ ++ +A + F+ + +++ V++N + RN A L + E G
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
T +L A++G++ GE+IH + + G +CN+LI+MYSKCGS+ A VF
Sbjct: 475 --FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M ++V+SW++MI+G A +G +E+F M GV P++ T+ +LSACSH GLV
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG + M +D I P + HY C+VDLL RAGLL A++ I +M + D +WRT LGA
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+H + LG+ ++EL E Y+ L N+Y+ G WE+ E+R M E+ L
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
GCS I + +H+F V D +HP ++IY LD + ++K GYV + LH L E
Sbjct: 713 GCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDE 772
Query: 432 NA----LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
L HSEK+A+AFG+++T +RV KNLR+C DCHN K +S V RE+++RD
Sbjct: 773 AEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRD 832
Query: 488 RLRFHHFREGRCSCNDYW 505
RFHHF++G+CSCNDYW
Sbjct: 833 LNRFHHFKDGKCSCNDYW 850
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACK 86
P + S +K C++ G +HAR++ + DS L +L+ LYS S +A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 87 LFDEIP---QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
+F+ + +RD V+W+ +++CY N R DA+ +F + E G P+D V++AC
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF--VEFLELGLVPNDYCYTAVIRAC 176
Query: 144 AHLGALEFGEKIHRYISEHG-YGSKMNLCNSLIAMYSKC-GSLGMAFEVFKGMPEKDVVS 201
++ + G ++ + G + S + + SLI M+ K S A++VF M E +VV+
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
W+ MI+ G R+AI F M +G D T + V SAC+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 153/327 (46%), Gaps = 20/327 (6%)
Query: 61 YQLDSQLMTTLMDLYSTFEKSFE-ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
++ D + +L+D++ E SFE A K+FD++ + + V W ++I+ ++ R+A+ F
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L+ SG + D T V ACA L L G+++H + G + SL+ MY+
Sbjct: 258 --LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYA 313
Query: 180 KC---GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAG-VFPDD 234
KC GS+ +VF M + V+SW+A+I+G N + +AI F M G V P+
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF+ AC + G L + K G+ N V+ + ++ ++ A +
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG----DYVLLLNLYSSVG 350
S+ K + L G CR E+ + L E+ +E G + LL+ ++VG
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNF----EQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 351 DWEKVKELREFMNEKGLQ-TTPGCSTI 376
K +++ + + GL P C+ +
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 31/283 (10%)
Query: 113 RDALCLFDNLNREESGCKP-DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
R A+ D + R+ G +P D VT +L++C G+ +H + E L
Sbjct: 43 RGAVSALDLMARD--GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLY 100
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMP---EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
NSLI++YSK G A +VF+ M ++DVVSWSAM++ NG DAI+ F
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY------GC-VVDLLG 281
G+ P+D +T V+ ACS+ V G + L G L H+ GC ++D+
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTL-------GFLMKTGHFESDVCVGCSLIDMFV 213
Query: 282 RA-GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE--LKAQESGD 338
+ + AY++ M + + W ++ C + I ++ L ES D
Sbjct: 214 KGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFES-D 268
Query: 339 YVLLLNLYSSVGDWEKV---KELREFMNEKGLQTTPGCSTIGL 378
L +++S+ + E + K+L + GL CS + +
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDM 311
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ F L ++ ++ + + F + + S+ G QIH++V++ G + + L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +YS A ++F+ + R+ ++W +I+ + ++ L F+ + E G KP
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE--GVKP 573
Query: 132 DDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
++VT + +L AC+H+G + G + + +H KM ++ + + G L AFE
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 191 FKGMP-EKDVVSWSAMI 206
MP + DV+ W +
Sbjct: 634 INTMPFQADVLVWRTFL 650
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 294/536 (54%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ + +E LF +MR N F + K C+ + G +H L+
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+LD + L+DLY+ +A + F+EIP++D + W+ +I+ Y ++ ++++A+ +F
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMF- 329
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ P+ T VLQACA + L G +IH ++ + G S + + N+L+ +Y+K
Sbjct: 330 -FQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK 388
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM--------------- 225
CG + + E+F P ++ V+W+ +I G G G A+ F M
Sbjct: 389 CGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSA 448
Query: 226 ----------------QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
V PD TF GVLSAC++ GL+D+G + M +D GI P
Sbjct: 449 LRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 508
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
I HY C+V LLGR G LD+A +LI + +P +WR LLGAC IH + LG + ++
Sbjct: 509 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVL 568
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
E++ Q+ +VLL N+Y++ W+ V +R+ M KG++ PG S I +G VH F V D
Sbjct: 569 EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 628
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
SHP + I ML+ ++ + K AGY+ L ++ EEK L HSE+LA++FG++
Sbjct: 629 TSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIR 688
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
TP G+ IR+ KNLRICVDCH K +S V RE+++RD RFHHF+EG CSC DYW
Sbjct: 689 TPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 171/341 (50%), Gaps = 14/341 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y+ S E LF ++ ++ NPF + +K + G IHA + + G
Sbjct: 110 LIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLG 169
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ ++ + T L+D YS + A ++FD I +D V+W +++C+ N ++AL LF
Sbjct: 170 HESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFS 229
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G KP++ T V +AC L A + G+ +H + Y + + +L+ +Y+K
Sbjct: 230 QMRM--VGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTK 287
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A F+ +P+KDV+ WS MI+ A + ++A+E F M++A V P+ TF V
Sbjct: 288 SGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ ++ G + K G+ ++ ++D+ + G ++ + +L +
Sbjct: 348 LQACATMEGLNLGNQIHCHVIK-IGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN 406
Query: 301 DSTIWRTLLGACRIHKHVTLGE-----RVIEHLIELKAQES 336
D T W T+ I HV LG+ R+ +++E + Q +
Sbjct: 407 DVT-WNTV-----IVGHVQLGDGEKALRLFLNMLEYRVQAT 441
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 38/365 (10%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
N A + A++ C++ G +H +L+ G LD L+++Y + +A KLF
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
DE+P+R+T+++ LI Y + R +A+ LF L+RE P T +L L G
Sbjct: 97 DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGE 156
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L +G IH I + G+ S + +LI YS CG + +A EVF G+ KD+VSW+ M++
Sbjct: 157 LGWG--IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTC 214
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC------------SHCGLVDE---- 252
A N ++A++ F M+ G P++ TF V AC C L
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELD 274
Query: 253 ---GMMFLDRMSKD---------FGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSMG- 297
G+ LD +K F +P ++ + ++ ++ +A ++ M
Sbjct: 275 LYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ 334
Query: 298 --VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYV--LLLNLYSSVGDWE 353
V P+ + ++L AC + + LG ++ H+I++ S +V L+++Y+ G E
Sbjct: 335 ALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKI-GLHSDVFVSNALMDVYAKCGRME 393
Query: 354 KVKEL 358
EL
Sbjct: 394 NSMEL 398
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 291/510 (57%), Gaps = 6/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR--IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y+ + EE LF +M + +P S + C + + G +H V++
Sbjct: 194 MICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV-LPACARSEAFAGKEAVHGYVVK 252
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + + LMD+Y+ K+ A ++F + D V+WN LI+ + DA L
Sbjct: 253 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 312
Query: 119 FDNLNR-EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ + EE G P+ +T + +L CA L A G++IH Y H + + + ++L+ M
Sbjct: 313 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 372
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQT 236
Y+KCG L ++ VF +P ++ ++W+ +I M+G G +A F M +G P++ T
Sbjct: 373 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVT 432
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F L+ACSH G+VD G+ M +D G+ P CVVD+LGRAG LD+AY ++TSM
Sbjct: 433 FMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSM 492
Query: 297 GV-KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
+ + W T+LGACR+H++V LGE E L+EL+ +E+ YVLL N+YS+ G W +
Sbjct: 493 EAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRA 552
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
E+R M +G+ PGCS I + G +H F+ + +HP E++ ++ + ++ GY
Sbjct: 553 AEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYT 612
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ + LH++ +K L HSEKLAIAFG+L PG TIRVAKNLR+C DCH AK L
Sbjct: 613 PDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFL 672
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + RE+++RD RFHHFR G+CSC DYW
Sbjct: 673 SKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 14/280 (5%)
Query: 49 GLQIHARVLRDGYQLDSQ--LMTTLMDLYSTFEKSFEACKLF-DEIPQR-DTVAWNVLIS 104
G + HA L++G Q L+ +Y+ +A +LF P R D V WN ++S
Sbjct: 33 GREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVS 92
Query: 105 CYIRNQRTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEH 162
+++ +A+ L+D + G +PD VT L AC+ L L+ G ++H Y I +
Sbjct: 93 VLVQSGMFDEAVQTLYDMV---ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD 149
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIE 220
+ + ++L+ MY+ +G A +VF +P+ K + W+AMI G A G +A+
Sbjct: 150 ELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALR 209
Query: 221 SFGAMQ-RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
F M+ AG P + T VL AC+ G + G+ N ++D+
Sbjct: 210 LFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDM 268
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVT 319
R G D A ++ + + PD W TL+ C + HV
Sbjct: 269 YARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVA 307
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 135 TCLLVLQACAHL----GALEFGEKIHRYISEHG--YGSKMNLCNSLIAMYSKCGSLGMAF 188
T + VL+A +HL A+ G + H + ++G +G + N+L++MY++ G + A
Sbjct: 12 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 71
Query: 189 EVFKG-MPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
+F G P + DVV+W+ M+S L +G +A+++ M GV PD TF L ACS
Sbjct: 72 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 131
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
L+D G + KD + N +VD+ + +A Q+ + PDS
Sbjct: 132 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV---PDS 184
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 293/508 (57%), Gaps = 10/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ + + EE F F KM + +PT + C L G +H L D
Sbjct: 318 MIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACA-NLGDLERGWFVHK--LLD 374
Query: 60 GYQLDSQL--MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
+LDS + M +L+ +YS ++ A +F+ + ++ V WN +I Y +N ++AL
Sbjct: 375 KLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALN 433
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + + G K D T + V+ A A + IH + + + +L+ M
Sbjct: 434 LFCMM--QSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDM 491
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y+KCG++ A ++F M E+ V++W+AMI G +G G++ ++ F MQ+ V P+D TF
Sbjct: 492 YAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITF 551
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
V+SACSH G V+EG++ M +D+ + P + HY +VDLLGRAG LD A+ I M
Sbjct: 552 LSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMP 611
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+KP ++ +LGAC+IHK+V LGE+ + L +L E G +VLL N+Y+S W+KV +
Sbjct: 612 IKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAK 671
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R M +KGL TPGCS + L+ +H F +HP +IY L+ + ++K AGYV +
Sbjct: 672 VRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPD 731
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
S +H++ + K LS HSE+LAIAFG+L T PGTT+ + KNLR+C DCH+ K +S
Sbjct: 732 PDS-IHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISL 790
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
V RE+I+RD RFHHF+ G CSC DYW
Sbjct: 791 VTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 162/311 (52%), Gaps = 9/311 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR--QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M++ Y+ +SS + F +M + R+ +AC ++ C + L G +IH ++
Sbjct: 116 MLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYAC--LLQLCGENLDLKKGREIHGLIIT 173
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+G++ + +MT +M LY+ + A K+F+ + +D V+W L++ Y +N + AL L
Sbjct: 174 NGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQL 233
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
L +E+G KPD VT + +L A A + AL G IH Y G+ S +N+ N+L+ MY
Sbjct: 234 V--LQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMY 291
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCGS +A VFKGM K VVSW+ MI G A NG +A +F M G P T
Sbjct: 292 FKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMM 351
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVL AC++ G ++ G F+ ++ + N+ ++ + + +D A + ++
Sbjct: 352 GVLLACANLGDLERG-WFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-- 408
Query: 299 KPDSTIWRTLL 309
+ + W ++
Sbjct: 409 EKTNVTWNAMI 419
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+ IPT ++ ++ C+ L QI ++++G+ + T ++ L+ F
Sbjct: 35 QSNSIPTRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGS 94
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
+ EA ++F+ + + V +++++ Y +N DALC F + +E D CL L
Sbjct: 95 NSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACL--L 152
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
Q C L+ G +IH I +G+ S + + +++++Y+KC + A+++F+ M KD+V
Sbjct: 153 QLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLV 212
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
SW+ +++G A NGH + A++ MQ AG PD T +L A +
Sbjct: 213 SWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVA 257
>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/456 (41%), Positives = 282/456 (61%), Gaps = 35/456 (7%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN-Q 110
+H V++ G++ + + +++++ S F + +A K+F+++ +RD +W L+ Y ++ +
Sbjct: 382 VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGE 441
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R +L F N+ ++ P++ + VL ACAHLGAL+ G IH YI + G N+
Sbjct: 442 MDRASLTFFCNMLCDDR-VNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNI 500
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+LI MY+KCG + A VF G+ ++DV+S+++MISGL+ +G G+DA+
Sbjct: 501 STALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDAL----------- 549
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
G L M +GI P I HYGC +DLLGRAG L++A
Sbjct: 550 ---------------------RGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERAL 588
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSV 349
+++ +M ++PD IWR LL A RIH +V LGE++I H+ +LK+ + +G VLL NLY+S+
Sbjct: 589 EVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASL 648
Query: 350 GDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL 409
G WE+V E+R+ M ++ +++PGCS I + G+VHEF V D HP+I EI L+EI K+L
Sbjct: 649 GRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRL 708
Query: 410 KIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 469
GY A +L EEK A+++HSEKLAIAFG+++T PGT IR+ KNLR C DCH
Sbjct: 709 SQIGYSANTMQVSFDLNEEEKEQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCH 768
Query: 470 NFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ K +S VY RE+++RDR RFH F EG CSC D+W
Sbjct: 769 SALKTISQVYGREIVVRDRSRFHTFIEGDCSCKDFW 804
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 182/320 (56%), Gaps = 10/320 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT--NPFACSFAIKCCMKFCSLMG-GLQIHARVL 57
M++AYS + S +E YLF +M PT + + +F C + +L G G +H V+
Sbjct: 125 MIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVV 184
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY-IRNQRTRDAL 116
+DGY+ D + +L+++YS F + +A ++FDE+PQRD + W ++ Y +R + +AL
Sbjct: 185 KDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEAL 244
Query: 117 -CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
C D L +E KP++ + +L ACAHLGAL+ G+ IH YI ++ N+ +LI
Sbjct: 245 QCFNDMLCHDE--VKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALI 302
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+KCG + A VF G+ ++D+++W++MISGL+M+G G + + +F M G PDD
Sbjct: 303 DMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDI 362
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T GVL+ CSH GLV+E + + M G N++ V+++ ++ A ++
Sbjct: 363 TLLGVLNGCSHSGLVEEEI--VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQ 420
Query: 296 MGVKPDSTIWRTLLGACRIH 315
M + D W +LLG H
Sbjct: 421 MSER-DVFSWTSLLGGYAKH 439
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE-KDVVSWSAMISGLAM 211
++IH + HG +L LI Y C +L A VF P + W+ MI +
Sbjct: 72 KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSK 131
Query: 212 NGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSACS 245
++++ F M G D TFT V +ACS
Sbjct: 132 TPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACS 167
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 281/448 (62%), Gaps = 11/448 (2%)
Query: 43 FCSLMGGLQIHAR--VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWN 100
+CSL GL AR + G LD T++ Y A ++F +P+R+ V+W+
Sbjct: 123 YCSL--GLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWS 180
Query: 101 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS 160
++ +R +AL +FD + REE +PD V + VL+ACAHLGA+E G +HRY+
Sbjct: 181 AMVDACVRAGEFGEALWVFDRMMREE--FRPDVVVLVSVLKACAHLGAVERGRWVHRYLE 238
Query: 161 EHGYGSK---MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+G + + L +L+ MY KCG + A++VF G+ +DVV W+AMI GLAMNG+G
Sbjct: 239 TGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGER 298
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+E F M + G P++ TF VL AC+H G VDEG M +D+GI P HYGC+
Sbjct: 299 ALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM-QDYGIKPQREHYGCLA 357
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
DLLGRAG +++A L+ M ++P ++ W L+ +C++H + +GERV + LIEL+ + G
Sbjct: 358 DLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGG 417
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
YV+L NLY+ G WE+ + +R+ M ++G + G S I L G+VHEF+ D HP +
Sbjct: 418 RYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRK 477
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVLATPPGTTI 456
IY +L++I ++L++ GYV + + + ++ EE KG ALSYHSE+LA+AFG+L P G I
Sbjct: 478 IYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPI 537
Query: 457 RVAKNLRICVDCHNFAKVLSGVYNREVI 484
R+ KNLR+C DCH +K++S +Y RE+I
Sbjct: 538 RIVKNLRVCRDCHVHSKLVSKLYEREII 565
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 290/508 (57%), Gaps = 5/508 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLR 58
++ YS + F + +M + P +F I C+ S G IH V++
Sbjct: 103 LISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK 162
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G + +++ ++ Y +CKLF+++ ++ V+WN +I +++N L
Sbjct: 163 FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAY 222
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F N++R G +PD T L VL++C +G + + IH I G+ + +L+ +Y
Sbjct: 223 F-NMSRR-VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLY 280
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SK G L + VF + D ++W+AM++ A +G GRDAI+ F M G+ PD TFT
Sbjct: 281 SKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFT 340
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
+L+ACSH GLV+EG + + MSK + I P + HY C+VDLLGR+GLL AY LI M +
Sbjct: 341 HLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPM 400
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P S +W LLGACR++K LG + E L EL+ ++ +YV+L N+YS+ G W+ +
Sbjct: 401 EPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRI 460
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAE 417
R M +KGL GCS I +H+FVV D SHP +I + L EI K++K GY ++
Sbjct: 461 RNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSK 520
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
LH++G + K ++ HSEK+A+AFG+L P I + KNLRIC DCH AK +S
Sbjct: 521 TEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISL 580
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R +IIRD RFHHF +G CSC+DYW
Sbjct: 581 IEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 159/345 (46%), Gaps = 34/345 (9%)
Query: 36 AIKCC--MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
A+K C ++ C L+ + + R G+ D L+ Y A KLFDE+P+
Sbjct: 40 AVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ-----LVGCYLRLGHDVCAEKLFDEMPE 94
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNR---EESGCKPDDVTCLLVLQACAHLGALE 150
RD V+WN LIS Y + R C F+ L+R E G +P++VT L ++ AC + G+ E
Sbjct: 95 RDLVSWNSLISGY--SGRGYLGKC-FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G IH + + G ++ + N+ I Y K G L + ++F+ + K++VSW+ MI
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD-----EGMMFLDRMSKDFG 265
NG + F +R G PD TF VL +C G+V G++ S +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I ++DL + G L+ + + + PDS W +L A H G I
Sbjct: 272 ITT------ALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWTAMLAAYATH---GFGRDAI 321
Query: 326 EHLIELKAQE--SGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
+H EL S D+V LLN S G E+ K E M+++
Sbjct: 322 KHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/453 (41%), Positives = 277/453 (61%), Gaps = 4/453 (0%)
Query: 55 RVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
+V + + D T+++ Y+ A ++F P +D VAW +++ Y +N
Sbjct: 198 KVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVK 257
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL +FD + E G D+V+ + ACA LGAL + G+G+ + + + L
Sbjct: 258 ALEVFDRM--AELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGL 315
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPD 233
+ MY+KCG + A +VF GM EK+V ++S+MI+GLA +G +AI F M RA V P+
Sbjct: 316 VDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPN 375
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
TF GVL+ACSH G+V EG + +M +GI+P+ HY C+VDLLGRAGL+D+A L+
Sbjct: 376 HVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLV 435
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWE 353
SM V P +W LLGACRIH + + V EHL +L+ + G+YVLL N+ +S G WE
Sbjct: 436 RSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWE 495
Query: 354 KVKELREFMNEKGLQTTPGCSTI-GLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA 412
+V ++R M ++ L+ P S G G+VH+F D +HPR +EI + L E+ +LK+
Sbjct: 496 EVSKVRILMRKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKLE 555
Query: 413 GYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFA 472
GYV ++S ++++ EEK L HSEKLA++FG+L G TIR+ KNLRIC DCH F
Sbjct: 556 GYVPILSSIVYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCHLFM 615
Query: 473 KVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+++S V + E+I+RD +RFHHF+ G CSC +W
Sbjct: 616 QLVSRVESVEIIVRDNMRFHHFKNGECSCGGFW 648
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 32/156 (20%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVS------------------------------ 201
NSLI Y CG +G A +VF M EKDV+S
Sbjct: 181 NSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMV 240
Query: 202 -WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
W+AM++G A N A+E F M G+ D+ + TG +SAC+ G + ++ +
Sbjct: 241 AWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRA-AWVQEI 299
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
++ G N+ +VD+ + GL+D+A ++ M
Sbjct: 300 AERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGM 335
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y+ ++ P + +F++M + + + + + AI C + +L + R G
Sbjct: 245 MVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTG 304
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + L+D+Y+ EA K+F + +++ ++ +I+ + R +A+ LF
Sbjct: 305 FGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFK 364
Query: 121 NL-NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMY 178
+ NR + +P+ VT + VL AC+H G + G + + +G + ++ +
Sbjct: 365 EMVNR--ANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLL 422
Query: 179 SKCGSLGMAFEVFKGM---PEKDVVSWSAMISGLAMNG 213
+ G + A ++ + M P V W A++ ++G
Sbjct: 423 GRAGLVDEALDLVRSMSVTPHGGV--WGALLGACRIHG 458
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 292/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A+ S E +L M+ + + + A+ C +L G IH+ ++ G
Sbjct: 375 IIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESG 434
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDALCLF 119
+ D L ++D+Y + + + +A ++F + RD V+WN +I+ Y R + +AL LF
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLF 494
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G PD ++ + L ACA +L G+ +H I E G S M + N+++ MY+
Sbjct: 495 QQM--QLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYA 552
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
K G+L +A ++F MP DV+SW+ MIS A +GH + F M G P+D TF
Sbjct: 553 KSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVS 612
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDF-GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
V+SACSH GLV +G+ + DF I P HY C+VDL+ RAG LD A + I + +
Sbjct: 613 VVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPL 672
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
KPD I T+LGA ++HK V + EHL+EL S YV+L NLY VG ++ ++
Sbjct: 673 KPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKI 732
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R M EK ++ P S+I +K VHEF D ++ R EI + L+ ++ ++ AGY +
Sbjct: 733 RRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDT 792
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
T LH++G E+K LSYHSEKLAIAFG+++T PGT++R+ KNLR+C DCH K +S +
Sbjct: 793 TLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKI 852
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF G CSC DYW
Sbjct: 853 TGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 11/315 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSL----MGGLQIHARV 56
M+ AY+ E+ +F M + + + C K L + L + R
Sbjct: 172 MITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER- 230
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
+ DS T L++ Y + +A + F + + + +I+ Y + +R +AL
Sbjct: 231 -EHDHLHDSSFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEAL 288
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + E G K D + C+ VL AC+ LE G IH ++ E + +N N+LI
Sbjct: 289 ELFKVMLLE--GVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALIN 346
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY KCGSL A EVF+ M +DV+SW+ +I+ + +A+ MQ GV D +
Sbjct: 347 MYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKIS 406
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F L C+ + +G M + + GI ++ ++D+ G D A ++ +M
Sbjct: 407 FVNALPLCATSEALAKGRMIHSWIVES-GIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 297 GVKPDSTIWRTLLGA 311
V+ D W ++ A
Sbjct: 466 KVR-DQVSWNAMITA 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
SL G ++HAR+ + + L+ +Y +A FD +P +D + W LI
Sbjct: 13 SLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIR 72
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC-AHLGALEFGEKIHRYISEHG 163
+ + + AL LF ++ E G P + + VL AC A LE G +IH +
Sbjct: 73 AHGQIGDSEQALHLFRSMQLE--GVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTA 130
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
S + +L+ MY KC S+ A +VF G+ K VV W+AMI+ A H AI+ F
Sbjct: 131 MESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFY 190
Query: 224 AMQRAGVFPDDQTFTGVLSACS 245
AM GV + TF GVL ACS
Sbjct: 191 AMLLEGVKAERITFIGVLDACS 212
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L A +L+ G+++H I + + + L+ MY CGSL A F MP +D
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-HCGLVDE----- 252
++W+ +I G A+ F +MQ GV P ++ F VL ACS L++E
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123
Query: 253 GMMFLDRMSKDFGILPN-IHHYG------------------------CVVDLLGRAGLLD 287
G++ M D + +H YG ++ + +
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183
Query: 288 QAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERV---IEHLIELKAQESGDYVL 341
QA Q+ +M GVK + + +L AC K + + + V +E +S
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243
Query: 342 LLNLYSSVGDWEK 354
L+N Y S GD E+
Sbjct: 244 LVNFYGSCGDLEQ 256
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/510 (38%), Positives = 299/510 (58%), Gaps = 6/510 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
M+ Y + E LF +M R + + F+ S AI+ C L G +IH + R
Sbjct: 103 MMTNYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRR 162
Query: 59 DGYQL--DSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDA 115
+G +L D + T L+++YS EA K+FD I D+V WN +I+ Y ++ R + A
Sbjct: 163 EGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQA 222
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
L L+ +++ + + P T + V+ CA L AL+ G IH + + + + + N+L+
Sbjct: 223 LDLYRSMH-DTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALV 281
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY KCG L A +VF M KD +SW+ +IS A +GH A+ + M GV P +
Sbjct: 282 HMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEV 341
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF G+LSACSH GLV +G+ + RM D I P++ H+GC++DLLGR G L +A ++ S
Sbjct: 342 TFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKS 401
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M ++ ++ W +LLGAC+ H + G R + +++ SG YVLL N+Y++ G W+ V
Sbjct: 402 MPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDV 461
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+++R+ M +G++ +PG S I + VVHEFV D SHP+ EIY L ++ +++K GYV
Sbjct: 462 EKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYV 521
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ +S H+L EEK + L HSEKLAI +G + P + +R+ KNLR+C+DCH K +
Sbjct: 522 PDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFM 581
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S + R++++RD RFH F G CSC DYW
Sbjct: 582 SRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 8/320 (2%)
Query: 4 AYSMSSSPEEGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGY 61
A+S + E F +M Q +R F+ A M ++ G +IH G
Sbjct: 3 AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62
Query: 62 QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDN 121
+ + T ++ +Y + +A F+E+ +++V WN +++ Y + R R+AL LF
Sbjct: 63 LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFRE 122
Query: 122 LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC--NSLIAMYS 179
+ +PD + + ++AC++L LE G +IH + G ++ +L+ MYS
Sbjct: 123 MCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYS 182
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQ-RAGVFPDDQTF 237
KCG L A +VF + + D V W+AMI+ A +G G+ A++ + +M + P TF
Sbjct: 183 KCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 242
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
V+ C+ + +G R+ + N+ +V + G+ G LD+A + SM
Sbjct: 243 VTVIDVCAELSALKQGRAIHARV-RATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 301
Query: 298 VKPDSTIWRTLLGACRIHKH 317
+K D W T++ + H H
Sbjct: 302 LK-DEISWNTIISSYAYHGH 320
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL--SACSHCGLVDEGMMFLDRMSKD 263
++ + NG +A+ F M ++G PD TF+ +L A +D+G + R ++
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGRE-IHRYARI 59
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G+LPN+ V+ + G+ G LD A + K +S W ++ ++
Sbjct: 60 SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWK-NSVTWNAMMTNYKLDGRDREALE 118
Query: 324 VIEHLIELKAQESGD---YVLLLNLYSSVGDWEKVKELREFMNEKG 366
+ + E D + + + S++ D E+ +E+ E + +G
Sbjct: 119 LFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREG 164
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/508 (37%), Positives = 300/508 (59%), Gaps = 8/508 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + EE LF +M + + ++ ++ C +L+ G Q+HA V++ G
Sbjct: 172 MVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCG 231
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN---QRTRDALC 117
++ + + +L +Y + ++ + +P VAWN L+S + + D C
Sbjct: 232 FECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYC 291
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ + +G +PD +T + V+ +C+ L L G++IH + G S++++ +SL++M
Sbjct: 292 MM-----KMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSM 346
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YS+CG L + + F E+DVV WS+MI+ +G G +AI+ F M++ + ++ TF
Sbjct: 347 YSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITF 406
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+L ACSHCGL D+G+ D M K +G+ + HY C+VDLLGR+G L++A +I SM
Sbjct: 407 LSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMP 466
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
VK D+ IW+TLL AC+IHK+ + RV + ++ + Q+S YVLL N+YSS W+ V E
Sbjct: 467 VKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSE 526
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R M +K ++ PG S + +K VH+F + D HP+ EI Q L+E+ ++K GYV +
Sbjct: 527 VRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPD 586
Query: 418 ITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSG 477
+S LH++ EEK L +HSEKLAIAF ++ TP G IRV KNLR+C DCH K +S
Sbjct: 587 TSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISE 646
Query: 478 VYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ E+I+RD RFHHF+ G CSC DYW
Sbjct: 647 IKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 158/352 (44%), Gaps = 39/352 (11%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK----- 80
I P S ++ C+ S+ G Q+H+ + G D + L++LYS F +
Sbjct: 65 IWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAV 124
Query: 81 -------------------------SFEACK-LFDEIPQRDTVAWNVLISCYIRNQRTRD 114
+ E+ K LFDE+P R+ WN +++ + + +
Sbjct: 125 ALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEE 184
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL LF +N E PD+ + VL+ CAHLGAL G+++H Y+ + G+ + + SL
Sbjct: 185 ALLLFSRMN--ELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSL 242
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
MY K GS+ V MP+ +V+W+ ++SG A G+ ++ + M+ AG PD
Sbjct: 243 AHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDK 302
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF V+S+CS ++ +G K G + +V + R G L + +
Sbjct: 303 ITFVSVISSCSELAILCQGKQIHAEAVKA-GASSEVSVVSSLVSMYSRCGCLQDSIKTFL 361
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNL 345
+ D +W +++ A H GE I+ E++ + G+ + L+L
Sbjct: 362 ECKER-DVVLWSSMIAAYGFHGQ---GEEAIKLFNEMEQENLPGNEITFLSL 409
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 284/492 (57%), Gaps = 7/492 (1%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
+ +M + + + + IK C +L G +H + G+ LD+ + L+ YS
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
A ++FD +P++ VAWN L+S + +N +A+ +F + ESG +PD T +
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM--RESGFEPDSATFV 212
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
+L ACA GA+ G +H+YI G + L +LI +YS+CG +G A EVF M E
Sbjct: 213 SLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+V +W+AMIS +G+G+ A+E F M+ G P++ TF VLSAC+H GLV+EG
Sbjct: 273 NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST---IWRTLLGACR 313
RM+K + ++P + H+ C+VD+LGRAG LD+AY+ I + +T +W +LGAC+
Sbjct: 333 YKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACK 392
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+H++ LG + + LI L+ G +V+L N+Y+ G ++V +R+ M L+ G
Sbjct: 393 MHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGY 452
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S I ++ + F + D SH EIY+ L+ + + K GY +H + EEK A
Sbjct: 453 SVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFA 512
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L YHSEKLA+AFG+L T I + KNLRIC DCH+ K +S V NR++ +RD+LRFHH
Sbjct: 513 LRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHH 571
Query: 494 FREGRCSCNDYW 505
F+ G CSC DYW
Sbjct: 572 FQNGSCSCLDYW 583
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 9/277 (3%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
Q+HA ++ GY L+T L+ L + LF +P D +N +I
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS---TS 83
Query: 111 RTRDAL-CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ R L C+ S P + T V+++CA L AL G+ +H + G+G
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ +L+ YSKCG + A +VF MPEK +V+W++++SG NG +AI+ F M+ +G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD TF +LSAC+ G V G + + G+ N+ +++L R G + +A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDVGKA 262
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
++ M + + W ++ A H + G++ +E
Sbjct: 263 REVFDKMK-ETNVAAWTAMISAYGTHGY---GQQAVE 295
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V + + +E +F +MR+ + + C + ++ G +H ++ +G
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ +L T L++LYS +A ++FD++ + + AW +IS Y + + A+ LF+
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY----GSKMNLCNSLIA 176
+ ++ G P++VT + VL ACAH G +E G +++ +++ Y G + ++C ++
Sbjct: 299 KM-EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVC--MVD 354
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVS----WSAMISGLAMN 212
M + G L A++ + + W+AM+ M+
Sbjct: 355 MLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 53/272 (19%)
Query: 153 EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
+++H ++ GYG +L LI + ++ +F +P D ++++I +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 213 GHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC---------------------------- 244
+ + M + V P + TFT V+ +C
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 245 -------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM- 296
S CG ++ DRM + +I + +V + GL D+A Q+ M
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEK-----SIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 297 --GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY-----VLLLNLYSSV 349
G +PDS + +LL AC V+LG V +++I E D L+NLYS
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII----SEGLDLNVKLGTALINLYSRC 256
Query: 350 GDWEKVKELREFMNEKGLQT-TPGCSTIGLKG 380
GD K +E+ + M E + T S G G
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 271/474 (57%), Gaps = 9/474 (1%)
Query: 41 MKFCSLMGGLQIHARVLRDGYQLDSQ------LMTTLMDLYSTFEKSFEACKLFDEIPQR 94
+ + +++ G + V+R DS T ++ Y+ ++F +P+R
Sbjct: 179 VAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPER 238
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNRE---ESGCKPDDVTCLLVLQACAHLGALEF 151
D ++W +++ + N ++ LFD + R G P+ VT + +L AC+ LGAL
Sbjct: 239 DLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAE 298
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
G KIH ++E G+ + + + N+L+ Y +CG+LG A VF GM +DV+SWS+MIS A
Sbjct: 299 GRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQ 358
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
G +A+E + M G PDD F VL ACS+ G+V+ F + D + P +
Sbjct: 359 RGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLE 418
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HY C+VD+LGRAG L A L+ M P ++ T+L AC+++ V GE E + EL
Sbjct: 419 HYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFEL 478
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
+ S Y+ L N+YS+ + +R+ M E+G++ PGCS I + VHEF+ D
Sbjct: 479 DPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKM 538
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
HP+ +EIY + + +Q+K AGY + L ++ +EK N L YHSEKLAIAFG+++TP
Sbjct: 539 HPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTP 598
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
PG +R+ KNLR+C DCH KV+S V RE+++RD RFHHF+ G CSCNDYW
Sbjct: 599 PGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 27/264 (10%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T L+ ++ EA LFD + +RD +AW ++++ DA FD +
Sbjct: 58 TALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPER--- 114
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
D V +L A A G +E + + E S SL++ Y + G + A
Sbjct: 115 ---DLVAWTAMLAANAERGQMENARETFDQMPERNLFS----WTSLLSAYGRSGDVKAAG 167
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF MPE ++V+W+AM++G +++G A +F +M + +T +LSA + G
Sbjct: 168 RVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLI----AWTAMLSAYAFNG 223
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM--------GVKP 300
+ RM + ++ + +V L LL+++ +L M G+ P
Sbjct: 224 HLRYTREIFQRMPER-----DLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTP 278
Query: 301 DSTIWRTLLGACRIHKHVTLGERV 324
+ + TLL AC + G ++
Sbjct: 279 NRVTFITLLDACSFLGALAEGRKI 302
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 19/251 (7%)
Query: 47 MGGLQIHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
+ G A+ L D Q D T ++ + +TF +A FD++P+RD VAW +++
Sbjct: 66 LSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAA 125
Query: 106 YIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
+ +A FD + + + +L A G ++ ++ + E
Sbjct: 126 NAERGQMENARETFDQMPER------NLFSWTSLLSAYGRSGDVKAAGRVFDSMPEW--- 176
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+ +++ YS G + A F MPE+D+++W+AM+S A NGH R E F M
Sbjct: 177 -NLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRM 235
Query: 226 QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK----DFGILPNIHHYGCVVDLLG 281
+ ++ +++A L++E DRM + G+ PN + ++D
Sbjct: 236 PERDLI----SWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACS 291
Query: 282 RAGLLDQAYQL 292
G L + ++
Sbjct: 292 FLGALAEGRKI 302
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FD I RD+ +W +++S Y R+ +A +FD + R G + +L A
Sbjct: 11 ARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG------SWTALLSAF 64
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A G E + + + E + + +++A +S F+ MPE+D+V+W+
Sbjct: 65 ALSGHHEEAKTLFDTMQERDLIA-WTIMLTVLATFSNIEDAKYHFD---QMPERDLVAWT 120
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AM++ A G +A E+F M +F ++T +LSA G V D M +
Sbjct: 121 AMLAANAERGQMENARETFDQMPERNLF----SWTSLLSAYGRSGDVKAAGRVFDSMPE- 175
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
N+ + ++ +G + +A + SM + D W +L A + H+
Sbjct: 176 ----WNLVAWTAMLTGYSLSGDVVRAKRAFDSMPER-DLIAWTAMLSAYAFNGHLRYTRE 230
Query: 324 VIEHLIE 330
+ + + E
Sbjct: 231 IFQRMPE 237
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-----KRIPTNPFACSFAIKCCMKFCSLMGGLQIHAR 55
MV A + EE LF++M + K + N + C +L G +IHA
Sbjct: 246 MVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAA 305
Query: 56 VLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
V G+ D + L++ Y +A +FD + +RD ++W+ +IS + + R +A
Sbjct: 306 VAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEA 365
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF-GEKIHRYISEHGYGSKMNLCNSL 174
+ L+ + E G PDD+ + VL AC++ G +E G+ + + + +
Sbjct: 366 MELYHRMLSE--GTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACM 423
Query: 175 IAMYSKCGSLGMAFEVFKGMP 195
+ + + G L A ++ + MP
Sbjct: 424 VDVLGRAGKLRDAEDLLRLMP 444
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
LG +E +I I++ S ++++Y++ G L A VF MP + SW+A
Sbjct: 4 RLGCVERARQIFDAIADRDSFS----WGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTA 59
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
++S A++GH +A F MQ + +T +L+ + +++ D+M +
Sbjct: 60 LLSAFALSGHHEEAKTLFDTMQERDLI----AWTIMLTVLATFSNIEDAKYHFDQMPER- 114
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGE 322
++ + ++ G ++ A + M P+ + W +LL A V
Sbjct: 115 ----DLVAWTAMLAANAERGQMENARETFDQM---PERNLFSWTSLLSAYGRSGDVKAAG 167
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
RV + + E + +L YS GD + K + M E+ L
Sbjct: 168 RVFDSMPEWNLVA---WTAMLTGYSLSGDVVRAKRAFDSMPERDL 209
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 188/494 (38%), Positives = 287/494 (58%), Gaps = 5/494 (1%)
Query: 15 FYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
F + +M + + P +F I C+ + G+ IH V++ G + +++ LM
Sbjct: 26 FEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALM 85
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+LY +CKLF+++ ++ V+WN +I +++N + L F N++R G KPD
Sbjct: 86 NLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF-NMSRW-VGLKPD 143
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T L VL+ C +G + + IH I G+ + + +L+ +Y+K G L + VF
Sbjct: 144 QATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFL 203
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+ D ++W+AM++ A +G+GRDAI+ F M G+ PD TFT +L+ACSH GLV+E
Sbjct: 204 EITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEE 263
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G + + MSK + I P + HY C+VDL+GR+GLL AY LI M ++P S +W LLGAC
Sbjct: 264 GRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 323
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
R++K LG + + L EL+ ++ +Y++L N+YS+ G W+ +R M +KGL G
Sbjct: 324 RVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASG 383
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKG 431
S I +H+FVV D SHP +I + L EI K++K G+ + LH++ + K
Sbjct: 384 YSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKE 443
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
++ HSEK+A+AFG+L P I + KNLRIC DCH AK +S + R +IIRD RF
Sbjct: 444 EMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRF 503
Query: 492 HHFREGRCSCNDYW 505
HHF EG CSC DYW
Sbjct: 504 HHFLEGSCSCRDYW 517
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 19/245 (7%)
Query: 91 IPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+P+RD VAWN LIS Y + + R E G +P++VT L ++ AC H G E
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G IH + + G ++ + N+L+ +Y K G L + ++F+ + K++VSW+ MI
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF------ 264
NG + + F + G+ PD TF VL C G+V R+S+
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVV--------RLSQGIHGLIMF 172
Query: 265 -GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G N ++DL + G L+ + + + PDS W +L A H + G
Sbjct: 173 CGFNANTCITTALLDLYAKLGRLEDSSTVFLEI-TSPDSMAWTAMLAAYATHGY---GRD 228
Query: 324 VIEHL 328
I+H
Sbjct: 229 AIKHF 233
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 288/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV ++ + + F +MR + I + + + C +L G QIHA ++R
Sbjct: 243 MVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTH 302
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + + + L+D+YS A F + ++ ++W LI Y +N + +A+ +F
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G PDD T V+ +CA+L +LE G + H G + + N+L+ +Y K
Sbjct: 363 EMQRD--GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGK 420
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M D VSW+A+++G A G ++ I+ F M V PD TF GV
Sbjct: 421 CGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGV 480
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS G V++G + M KD GI+P HY C++DL R+G L +A + I M + P
Sbjct: 481 LSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHP 540
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL ACR+ + +G+ E+L+E+ Q YVLL +++++ G+W +V +LR
Sbjct: 541 DAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRR 600
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ ++ PGCS I K VH F DD SHP IY+ L+ +N ++ GY +++S
Sbjct: 601 GMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSS 660
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ +K + +S+HSEKLAIAFG++ P IR+ KNLR+CVDCHN K++S +
Sbjct: 661 VLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITG 720
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD +RFH F G CSC D+W
Sbjct: 721 RDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 39/294 (13%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q H ++LR G+ +++ + + L+ +Y+ +A ++FDE+ ++ V +N +I+ +R
Sbjct: 159 GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLR 218
Query: 109 NQRTRDALCLFDNLNREE-----------------------------SGCKPDDVTCLLV 139
+ +A LF+ + + G D T +
Sbjct: 219 CKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSI 278
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
L AC L ALE G++IH YI Y + + ++L+ MYSKC S+ A F+ M K++
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNI 338
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDR 259
+SW+A+I G NG +A+ F MQR G+ PDD T V+S+C++ ++EG F
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF--- 395
Query: 260 MSKDFGILPNIHHY----GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++ + HY +V L G+ G ++ A++L M + D W L+
Sbjct: 396 --HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-LFHDQVSWTALV 446
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
LF + QRDTV++N +I+ + A+ L+ L R S +P +T ++ A + L
Sbjct: 94 LFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASAL 153
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
G G + H I G+G + + L+ MY+K G +G A VF M K+VV ++ MI
Sbjct: 154 GDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMI 213
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
+GL +A F M D T+T +++ + GL + + F RM GI
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDR----DCITWTTMVTGFTQNGLESQALNFFRRMRFQ-GI 268
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ + +G ++ G L+Q Q+
Sbjct: 269 AIDQYTFGSILTACGALSALEQGKQI 294
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 283/494 (57%), Gaps = 7/494 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE M + + N + S + C L +HA ++ G D + ++L
Sbjct: 164 EEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSL 220
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D Y ++FDE+ RD V WN +I+ + ++ A+ LF + +++G
Sbjct: 221 IDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELF--MRMKDAGFSA 278
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ T VL+AC + LE G ++H ++ + Y + L N+L+ MY KCGSL A +F
Sbjct: 279 NQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALF 336
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
MP++DV+SWS MISGLA NG +A+ F M+ GV P+ T GVL ACSH GLV+
Sbjct: 337 HRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVE 396
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G + M K FGI P H+ C+VDLLGRAG LD+A + I M ++PD+ IWRTLLGA
Sbjct: 397 DGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGA 456
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CR+HK L +++L+ + G VLL N Y+ + W ++ + M ++G++ P
Sbjct: 457 CRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEP 516
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S I L+ VH F+ D+SHP + I Q L+ + ++ GYV + L +L E+K
Sbjct: 517 GRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKE 576
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ L YHSEK+AIAFG + G IR+ KNLRIC DCH FAK++S R +IIRD +RF
Sbjct: 577 DLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRF 636
Query: 492 HHFREGRCSCNDYW 505
HHF++G CSC DYW
Sbjct: 637 HHFQDGACSCGDYW 650
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 8/244 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S LF +M+ N + ++ C L G Q+HA VL+
Sbjct: 251 IIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK-- 308
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ D L L+D+Y +A LF +PQRD ++W+ +IS +N ++ +AL +FD
Sbjct: 309 YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFD 368
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G P+ +T + VL AC+H G +E G R + + G + N ++ +
Sbjct: 369 LMKSE--GVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLG 426
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A E + M E D V W ++ M+ G + ++ A + + PDDQ
Sbjct: 427 RAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGN--LAAYAAREILKLEPDDQGAR 484
Query: 239 GVLS 242
+LS
Sbjct: 485 VLLS 488
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 26/295 (8%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ---------LMTTLMDLYSTF 78
+P + + +K C++ + G IH V G QL + +L+ +Y+ F
Sbjct: 70 ADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHG-QLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIR-NQRTRDALCLFDNLNREESGCKPDDVTCL 137
+A +LFD +P+R+ V W +++ + R +AL + R+ G P+ T
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRD--GVAPNAYTFS 186
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
VL AC G L +H + G S + + +SLI Y K G L VF M +
Sbjct: 187 SVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTR 243
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF- 256
D+V W+++I+G A +G G AIE F M+ AG + T T VL AC+ +++ G
Sbjct: 244 DLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVH 303
Query: 257 --LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + +D IL N ++D+ + G L+ A L M + D W T++
Sbjct: 304 AHVLKYERDL-ILHN-----ALLDMYCKCGSLEDAEALFHRMPQR-DVISWSTMI 351
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY--------GSKMNLCNSLIAMYSKC 181
+ D V+ +++ C G G IHR++ HG G + + NSL++MY+K
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 182 GSLGMAFEVFKGMPEKDVVSWSAMISGLA-MNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G L A +F MPE++VV+W+ +++ LA +G +A+ AM R GV P+ TF+ V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC G+ + L + G+ ++ ++D + G LD ++ M V
Sbjct: 189 LGACGTPGV----LAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEM-VTR 243
Query: 301 DSTIWRTLLGA 311
D +W +++
Sbjct: 244 DLVVWNSIIAG 254
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/457 (40%), Positives = 270/457 (59%), Gaps = 7/457 (1%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H VL+ G+ +S + T + L+ A K FD +P++ +WN +IS Y +N
Sbjct: 335 LHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGL 394
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
T A+ LF+ + + +P+ +T L ACA LGAL G+ +HR I+E + +
Sbjct: 395 TEMAVALFEQMVK--LNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+LI MY+KCGS+ A +F M K+VVSW+AMI+G ++G G +A++ + M A +
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P TF VL ACSH GLV+EG M+ D+ I P I H C+VDLLGRAG L +A++
Sbjct: 513 PTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFE 572
Query: 292 LITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
LI+ V P +W LLGAC +HK L + + L EL + SG YVLL NL++S
Sbjct: 573 LISEFPKSAVGPG--VWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTS 630
Query: 349 VGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
+ + +R+ + L TPG + I + H F+ D +HP+ IY L+++ +
Sbjct: 631 KKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAK 690
Query: 409 LKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDC 468
+ AGY E + L+++ EEK + + HSEKLAIAFG+L+T PGT IR+ KNLR+C+DC
Sbjct: 691 MIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDC 750
Query: 469 HNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
HN K +S V R +++RD RFHHFR+G CSC DYW
Sbjct: 751 HNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 148/339 (43%), Gaps = 41/339 (12%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D+ + + L LY + A K+FD +P DTV WN L++ +A+ F +
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLA----GLSGSEAVESFARMV 203
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ S +PD T VL A A + + G +H + + G ++ LI++YSKCG
Sbjct: 204 CDGS-VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG---- 239
+ A +F M + D+V+++A+ISG ++NG ++ F + G++P+ T
Sbjct: 263 VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322
Query: 240 -------VLSACSHCGLVDEGMMF-----------------LDRMSKDFGILP--NIHHY 273
+L+ C H ++ G ++ K F +P + +
Sbjct: 323 HSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESW 382
Query: 274 GCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
++ + GL + A L M V+P+ + L AC ++LG + + +I
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLG-KWLHRIIT 441
Query: 331 LKAQESGDYVL--LLNLYSSVGDWEKVKELREFMNEKGL 367
+ E YV+ L+++Y+ G + + + M+ K +
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 5/209 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E LFE+M + + NP S + C + +L G +H + +
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +MT L+D+Y+ EA ++F+ + ++ V+WN +I+ Y + + +AL L+
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYK 504
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYS 179
++ ++ P T L VL AC+H G +E G K+ R ++ ++ + C ++ +
Sbjct: 505 DM--LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562
Query: 180 KCGSLGMAFEVFKGMPEKDVVS--WSAMI 206
+ G L AFE+ P+ V W A++
Sbjct: 563 RAGQLKEAFELISEFPKSAVGPGVWGALL 591
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/507 (39%), Positives = 299/507 (58%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ RA + P E + ++ +P + FA + A K C +L G+ +HA + G
Sbjct: 80 LARAAAHRGLPGEAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLLG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ LYS + A KLFD I R VAWN +IS Y +N A+ ++
Sbjct: 140 FGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYR 199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + PD T + L ACA GAL+ G ++ R I + L ++L+ MY++
Sbjct: 200 EM--QVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYAR 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + F + E++VV+W++MI+G M+GHGR+AI+ F M+R G P+D TF V
Sbjct: 258 CGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPNDVTFVAV 317
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI-TSMGVK 299
L+AC+H GLV+EG D M + +G++P HY +VD+ GRAGLLD A Q I S+ +
Sbjct: 318 LAACAHAGLVNEGRNAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFICDSIPEE 377
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +W +LGAC++HK+ LG V E LI L+ + VLL N+Y+ G V+++R
Sbjct: 378 PGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVR 437
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M ++ L+ G S I L G H F + + SH + EIY+ L+E+ ++ AGYV E
Sbjct: 438 NVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYRYLEELIHRISDAGYVPETD 497
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT-IRVAKNLRICVDCHNFAKVLSGV 478
S LH L EE+ AL YHSEKLA+A+G++ + T IRV KNLRIC DCH K +S V
Sbjct: 498 SVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTAPIRVIKNLRICGDCHLAIKFMSSV 557
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD+ RFHHF++G+CSC +YW
Sbjct: 558 ESREIIVRDKHRFHHFKDGKCSCLEYW 584
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 294/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +Y+ + +E F LF K++ R F + + +L G QIH + + G
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+S++ L+D+Y+ EA K+FD I + TV W +IS Y++ + + + +F
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ R +G D T +L+ACA+L ++ G ++H + G+ S + ++L+ Y+K
Sbjct: 433 DMRR--TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAK 490
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + F MPE++ VSW+A+IS A NG+ + SF M ++G PD +F V
Sbjct: 491 CGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSV 550
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSHCG V+E + + M++ + + P HY +VD+L R G D+A +L+T M +P
Sbjct: 551 LSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEP 610
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYVLLLNLYSSVGDWEKVKELR 359
+W ++L +CRIHK+ L ++ + L ++ +++ Y+ + N+Y+ G W+ V +++
Sbjct: 611 SEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVK 670
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M ++G++ P S + +K H F +D SHP + +I + ++ ++K+++ GY + T
Sbjct: 671 KAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ K +L YHSE+ AIAF ++ TP G+ I V KNLR C DCH KV+S +
Sbjct: 731 CALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIV 790
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 791 EREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
F K +A +LFD + +R V+W +LI Y+++ ++++A L+ ++ R G +PD VT +
Sbjct: 87 FGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRR--GGIEPDYVTLV 144
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
+L L +IH ++ + GY + +CNSL+ Y K L +A ++FK M K
Sbjct: 145 TLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
D V+++++++G + G +AIE F + +G+ P D TF +LSA GL D
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDD 256
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 35/362 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y S+ +E F L+ MR+ I + + + + +QIH V++ G
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + +L+D Y + A +LF + +DTV +N L++ Y +A+ LF
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF- 229
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L SG KP D T +L A L +FG+++H ++ + + + + N+L+ YSK
Sbjct: 230 -LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
+ ++F MPE D +S++ +I+ A NG +++ + F +Q F +
Sbjct: 289 HDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 241 LSACS-----------HCGLVDEGMMFLDRMSKDF--------------GILPNIH---- 271
LS + HC + G F R+ I NI
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 272 -HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ ++ + G ++ + + M GV D + ++L AC ++LG ++
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 328 LI 329
LI
Sbjct: 469 LI 470
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 294/507 (57%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ RA + P + + +P + FA + K C ++ G+ IHA + G
Sbjct: 76 LTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIHAHAVLLG 135
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T+L+ LYS + A KLFD I + VAWN +IS Y +N A+ ++
Sbjct: 136 LGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYR 195
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + +G PD T + L ACA GAL+ G ++ + I + L +L+ MY++
Sbjct: 196 EM--QMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYAR 253
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E F + E++VV+W++MI+G M+GHG +A++ F M++ G P+D TF V
Sbjct: 254 CGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAV 313
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI-TSMGVK 299
LSAC+H GLV EG M +G++P + HY +VD+ GRAGLLD A + I S+ +
Sbjct: 314 LSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPGE 373
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +W +LGAC++HK LG V E LI L+ + VLL NLY+ G V+++R
Sbjct: 374 PGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKMNHVEKVR 433
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M ++ L+ G S I + GV H F + + SHP+ +EIYQ L+++ +++ GYV +
Sbjct: 434 DTMIKRRLKKPIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKLIEKITDVGYVPKTD 493
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT-IRVAKNLRICVDCHNFAKVLSGV 478
S LH L EE+ AL YH EKLA+AFG++ T TT IR+ KNLRIC DCH K +S V
Sbjct: 494 SVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTTPIRIIKNLRICEDCHLAIKYMSAV 553
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+I+RD RFHHF+ G+CSC +YW
Sbjct: 554 ENREIIVRDMHRFHHFKAGKCSCQEYW 580
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 290/499 (58%), Gaps = 8/499 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M ++ + + F + + L+GG Q H +++ G+ +S + + L+
Sbjct: 226 EAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLI 285
Query: 73 DLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCY-IRNQRTRDALCLFDNLNREESGCK 130
DLYS S C K+F+EI D V WN +IS + + + D L F + R +G +
Sbjct: 286 DLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQR--NGFR 343
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
PDD + + V AC++L + G+++H I +++++ N+L+AMYSKCG++ A
Sbjct: 344 PDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARR 403
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF MPE + VS ++MI+G A +G +++ F M + P+ TF VLSAC H G
Sbjct: 404 VFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGK 463
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V+EG + + M + F I P HY C++DLLGRAG L +A ++I +M P S W TLL
Sbjct: 464 VEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
GACR H +V L + + L+ + YV+L N+Y+S WE+ ++ M E+G++
Sbjct: 524 GACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKK 583
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSEL---HNLG 426
PGCS I + VH FV +D SHP I EI+ + ++ K++K AGYV +I L +
Sbjct: 584 KPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVE 643
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
+E+ L YHSEKLA+AFG+++T G I V KNLRIC DCHN K++S + RE+ +R
Sbjct: 644 PDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVR 703
Query: 487 DRLRFHHFREGRCSCNDYW 505
D RFH F+EG CSC DYW
Sbjct: 704 DTHRFHCFKEGHCSCRDYW 722
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 9/251 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ LFE++R+ R+ + F S I C L+ Q+H V+ G
Sbjct: 112 LIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLV--RQLHCFVVVCG 169
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ---RDTVAWNVLISCYIRNQRTRDALC 117
+ + + ++ YS EA ++F E+ + RD V+WN +I +++ +A+
Sbjct: 170 HDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVG 229
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + R G K D T VL A + L G + H + + G+ ++ + LI +
Sbjct: 230 LFREMVRR--GLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDL 287
Query: 178 YSKC-GSLGMAFEVFKGMPEKDVVSWSAMISGLAM-NGHGRDAIESFGAMQRAGVFPDDQ 235
YSKC GS+ +VF+ + D+V W+ MISG ++ D + F MQR G PDD
Sbjct: 288 YSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDC 347
Query: 236 TFTGVLSACSH 246
+F V SACS+
Sbjct: 348 SFVCVTSACSN 358
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 10/255 (3%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
TL++ Y+ A ++FDEIPQ D V++N LI+ Y L LF+ + G
Sbjct: 79 NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
D T V+ AC L ++H ++ G+ ++ N+++A YS+ G L A
Sbjct: 139 L--DGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEAR 194
Query: 189 EVFKGMPE---KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
VF+ M E +D VSW+AMI + G +A+ F M R G+ D T VL+A +
Sbjct: 195 RVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFT 254
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-AGLLDQAYQLITSMGVKPDSTI 304
+ G F M K G N H ++DL + AG + + ++ + PD +
Sbjct: 255 CVKDLVGGRQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI-TAPDLVL 312
Query: 305 WRTLLGACRIHKHVT 319
W T++ +++ ++
Sbjct: 313 WNTMISGFSLYEDLS 327
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 184/502 (36%), Positives = 289/502 (57%), Gaps = 4/502 (0%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
++ SS E + +++++ I + ++ C S+ Q+H +R+G LD
Sbjct: 443 FAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LD 501
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
L L+D+Y + + LF + ++D V+W +I+C N R A+ LF +
Sbjct: 502 LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEM-- 559
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
+++ +PD V + +L A A L +L G+++H ++ + + + +SL+ MYS CGS+
Sbjct: 560 QKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSM 619
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF+ KDVV W+AMI+ M+GHG+ AI+ F M + G+ PD +F +L AC
Sbjct: 620 NYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYAC 679
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
SH LV+EG +LD M + + P HY CVVD+LGR+G ++AY+ I +M + P S +
Sbjct: 680 SHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAV 739
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
W LLGACR+H++ L L+EL+ G+Y+L+ N+++ +G W KE R M E
Sbjct: 740 WCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAE 799
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI-AGYVAEITSELH 423
+GL+ P CS I + +H F D H I+ L EI + L+ GYV + LH
Sbjct: 800 RGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLH 859
Query: 424 NLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREV 483
+ EEK + L HSE++AIAFG+++T PG IR+AKNLR+C DCH F K++S ++ R++
Sbjct: 860 DTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDI 919
Query: 484 IIRDRLRFHHFREGRCSCNDYW 505
++RD RFHHF G CSC D+W
Sbjct: 920 VVRDANRFHHFSGGSCSCEDFW 941
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 30/312 (9%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF M+ P N + ++ C + L G ++HA +L+ G +L+ Q L+
Sbjct: 250 EALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALL 308
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+Y+ + + A ++F +I ++D ++WN ++SCY++N +A+ F + + G +PD
Sbjct: 309 VMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEM--LQHGFQPD 366
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ + A HL L G + H Y + + + + N+L+ MY KCGS+ + +VF+
Sbjct: 367 HACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFE 426
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M +D +SW+ +++ A + +A+E +Q+ G+ D +L C CGL
Sbjct: 427 SMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC--CGL--- 481
Query: 253 GMMFLDRMSKDFGILPNIHHYGC------------VVDLLGRAGLLDQAYQLITSMGVKP 300
K +L +H Y ++D+ G G D + L + K
Sbjct: 482 ---------KSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVE-KK 531
Query: 301 DSTIWRTLLGAC 312
D W +++ C
Sbjct: 532 DIVSWTSMINCC 543
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 13/320 (4%)
Query: 49 GLQIHARVLRDGY---QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC 105
G Q+HA + G D L T L+ +Y + +A +LF+ +P R +WN L+
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 106 YIRNQRTRDALCLFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y+ + +A+ ++ + + G PD T VL+AC G G ++H + G
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVVSWSAMISGLAMNGHGRDAIESF 222
+ N+LI MY+KCG L A VF+ + + +DV SW++++SG NG +A+ F
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
MQ AG + T VL C+ GL+ G + K G NI +V + +
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLK-CGSELNIQCNALLV-MYAK 313
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVL 341
G +D A ++ + K D W ++L +C + + I+ E L+ D+
Sbjct: 314 YGRVDSALRVFGQIAEK-DYISWNSML-SCYVQN--SFYAEAIDFFGEMLQHGFQPDHAC 369
Query: 342 LLNLYSSVGDWEKVKELREF 361
+++L S++G ++ REF
Sbjct: 370 VVSLSSALGHLSRLNNGREF 389
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 281/487 (57%), Gaps = 2/487 (0%)
Query: 20 KMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQ-LDSQLMTTLMDLYSTF 78
K R +PF+ +K + GL + R + D L+S TT++ Y+
Sbjct: 126 KQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARS 185
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
+ FEA +LF + P R+ AW LIS +++ DA LF + R E D +
Sbjct: 186 GRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEM-RHEGISVTDPLVLSS 244
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
V+ ACA+L E G+++H + GY S + + N+LI MY+KC L A +F M KD
Sbjct: 245 VVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKD 304
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
VVSW+++I G A +G +A+ + M AGV P++ TF G++ ACSH GLV +G
Sbjct: 305 VVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFR 364
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M +D GI P++ HY C++DL R+G LD+A LI +M V PD W LL +C+ H +
Sbjct: 365 TMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNT 424
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
+ R+ +HL+ LK ++ Y+LL N+Y+ G WE V ++R+ M + PG S I L
Sbjct: 425 QMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDL 484
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
H F + SHP +EI ++ E++++++ GY + +S LH++ +EK L +HS
Sbjct: 485 GKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHS 544
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
E+LA+A+G+L PGT IR+ KNLR+C DCH K++S + NRE+ +RD R+HHF++G
Sbjct: 545 ERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGN 604
Query: 499 CSCNDYW 505
CSCND+W
Sbjct: 605 CSCNDFW 611
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 71/381 (18%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
++HA++++ G + TL++ Y +A +LFD +P+RD VAW L++ +
Sbjct: 24 KLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSN 83
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF--GEKIHRYISEHGYGSKM 168
R AL + +L +G PD +++ACA+LG L G+++H +
Sbjct: 84 RPHRALSISRSL--LSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141
Query: 169 NLCNSLIAMYSKCG-------------SLGM------------------AFEVFKGMPEK 197
+ +SLI MY+K G SL AF +F+ P +
Sbjct: 142 VVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYR 201
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQTFTGVLSACSHCGLVDEGMM- 255
++ +W+A+ISGL +G+G DA F M+ G+ D + V+ AC++ L + G
Sbjct: 202 NLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQM 261
Query: 256 ------------------FLDRMSK--DFGILPNIHHYGCVVDLL---------GRAGLL 286
+D +K D I C D++ + G
Sbjct: 262 HGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQA 321
Query: 287 DQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG--DYVL 341
++A L M GVKP+ + L+ AC V+ G + ++E Y
Sbjct: 322 EEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTC 381
Query: 342 LLNLYSSVGDWEKVKELREFM 362
LL+L+S G ++ + L M
Sbjct: 382 LLDLFSRSGHLDEAENLIRTM 402
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
+K+H I + G + N+L+ Y KCG + A ++F +P +D V+W+++++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL--VDEGM-----MFLDRMSKD 263
++ A+ ++ G PD F ++ AC++ G+ V +G FL S D
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ ++ +D+ + GL D + S+ +S W T++
Sbjct: 141 DVVKSSL------IDMYAKFGLPDYGRAVFDSIS-SLNSISWTTMI 179
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 301/538 (55%), Gaps = 34/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG--GLQIHARVLR 58
++ A ++S+ P + F + + + + + F S IK C S+ G Q+HAR L
Sbjct: 80 VLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLL 139
Query: 59 DGYQLDSQLMTTLMDLYSTFE-------------------------------KSFEACKL 87
+ D + ++L+D+Y+ FE + EA +L
Sbjct: 140 SPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALEL 199
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
F E P ++ AW LIS +++ DAL LF + RE D + V+ ACA+
Sbjct: 200 FRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIA-DPLVLSSVVGACANSA 258
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
E G+++H + GY S + + N+L+ MY+KC + A +F M KDVVSW+++I
Sbjct: 259 VRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIV 318
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
G A +G +A+ + M AGV P++ TF G++ ACSH GLV +G M +DFGI
Sbjct: 319 GTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIR 378
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
P++ HY C++DL R+G LD+A LI +M VKPD W LL AC+ H + + R+ +H
Sbjct: 379 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADH 438
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L++LK ++ Y+LL N+Y+ G WE V +R+ M K ++ PG S + L F
Sbjct: 439 LLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHA 498
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
+ S P +EI ++ +++ +++ GYV + +S L ++ +EK L +HSE+LA+A+G+
Sbjct: 499 GEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGL 558
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
L PGTTIR+ KNLR+C DCH K++S + +RE+ +RD R+HHF++G+CSCND+W
Sbjct: 559 LKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 171/390 (43%), Gaps = 73/390 (18%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW-NVLISCYIRN 109
++HA++++ G TL+D Y +A KLFD +PQ+D VAW VL +C + N
Sbjct: 29 KLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSN 88
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA--LEFGEKIH-RY-------- 158
+ +L G +PD +++ACA+LG+ ++ G+++H R+
Sbjct: 89 LPHK---AFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 159 ---------------ISEHG---YGSKMNLCN----SLIAMYSKCGSLGMAFEVFKGMPE 196
+ ++G + S L + ++I+ Y++ G A E+F+ P
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPF 205
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV-FPDDQTFTGVLSACS---------- 245
K++ +W+A+ISGL +G+ DA+ F M+R GV D + V+ AC+
Sbjct: 206 KNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQ 265
Query: 246 -HCGLVDEGM--------MFLDRMSKDFGILP-----------NIHHYGCVVDLLGRAGL 285
HC ++ G +D +K ++ ++ + ++ + GL
Sbjct: 266 VHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGL 325
Query: 286 LDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG--DYV 340
++A L M GVKP+ + L+ AC V+ G + + ++E Y
Sbjct: 326 AEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYT 385
Query: 341 LLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
LL+L+S G ++ + L M K + T
Sbjct: 386 CLLDLFSRSGHLDEAENLIRTMPVKPDEPT 415
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAM 211
+K+H I + G +LI Y KCG L A ++F +P++D V+W+ ++S +
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 212 NGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
+ A + G+ PD F+ ++ AC++ G V
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSV 125
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 294/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ +Y+ + +E F LF K++ R F + + +L G QIH + + G
Sbjct: 313 VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+S++ L+D+Y+ EA K+FD I + TV W +IS Y++ + + + +F
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ R +G D T +L+ACA+L ++ G ++H + G+ S + ++L+ Y+K
Sbjct: 433 DMRR--TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAK 490
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + F MPE++ VSW+A+IS A NG+ + SF M ++G PD +F V
Sbjct: 491 CGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSV 550
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSHCG V+E + + M++ + + P HY +VD+L R G D+A +L+T M +P
Sbjct: 551 LSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEP 610
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELK-AQESGDYVLLLNLYSSVGDWEKVKELR 359
+W ++L +CRIHK+ L ++ + L ++ +++ Y+ + N+Y+ G W+ V +++
Sbjct: 611 SEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVK 670
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M ++G++ P S + +K H F +D SHP + +I + ++ ++K+++ GY + T
Sbjct: 671 KAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ K +L YHSE+ AIAF ++ TP G+ I V KNLR C DCH KV+S +
Sbjct: 731 CALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIV 790
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF++G CSC DYW
Sbjct: 791 EREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
F K +A +LFD + +R V+W +LI Y+++ ++++A L+ ++ R G +PD VT +
Sbjct: 87 FGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRR--GGIEPDYVTLV 144
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK 197
+L L +IH ++ + GY + +CNSL+ Y K L +A ++FK M K
Sbjct: 145 TLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
D V+++++++G + G +AIE F + +G+ P D TF +LSA GL D
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDD 256
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 35/362 (9%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y S+ +E F L+ MR+ I + + + + +QIH V++ G
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + +L+D Y + A +LF + +DTV +N L++ Y +A+ LF
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF- 229
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L SG KP D T +L A L +FG+++H ++ + + + + N+L+ YSK
Sbjct: 230 -LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
+ ++F MPE D +S++ +I+ A NG +++ + F +Q F +
Sbjct: 289 HDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 241 LSACS-----------HCGLVDEGMMFLDRMSKDF--------------GILPNIH---- 271
LS + HC + G F R+ I NI
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 272 -HYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
+ ++ + G ++ + + M GV D + ++L AC ++LG ++
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 328 LI 329
LI
Sbjct: 469 LI 470
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 295/505 (58%), Gaps = 23/505 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS + P++ + LF M + I +K Q+HA ++
Sbjct: 107 MISGYSQNERPDQAWELFIMMLRAGI--------HQVK------------QVHAFAVKTN 146
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++L + ++L+D+Y+ E EA ++FD +P RD V++ ++S Y + +AL LF
Sbjct: 147 FELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFR 206
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E C + VT +L A + L ++++G+++H I M L NSLI MYSK
Sbjct: 207 LLYNEGMQC--NQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSK 264
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L + VF MPE+ VVSW+AM+ G +G + ++ F +M V PD T V
Sbjct: 265 CGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAV 323
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS SH GLVDEG+ D + K+ L N HYGCV+DLLGR+G L +A LI M +P
Sbjct: 324 LSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQP 383
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
IW +LLGACR+H +V +GE V + L++++ + +G+YV+L N+Y++ G W+ V +R+
Sbjct: 384 TRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRK 443
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +K + PG S + L V+H F + HPR +I + EI +K AG+V +++
Sbjct: 444 LMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSC 503
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K L HSEKLAI FG+++TP TI+V KNLRICVDCHNFAK +S VY
Sbjct: 504 VLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYG 563
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD+ RFH EG C+C DYW
Sbjct: 564 REISLRDKNRFHLITEGACTCGDYW 588
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 163/364 (44%), Gaps = 62/364 (17%)
Query: 36 AIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
AI C++ +L G Q+HAR++ GY+ L T L+ +Y+ +A + D +P+R+
Sbjct: 41 AITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERN 100
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V+W +IS Y +N+R A LF +++L+A H +++
Sbjct: 101 VVSWTAMISGYSQNERPDQAWELF-----------------IMMLRAGIHQ-----VKQV 138
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + + M + +SL+ MY+K ++ A VF +P +DVVS++A++SG G
Sbjct: 139 HAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLD 198
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM----MFLDRMSKDFGILPN-- 269
+A++ F + G+ + TFT +L+A S +D G + L R F L N
Sbjct: 199 EEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSL 258
Query: 270 IHHYGCVVDLL------------------------GRAGLLDQAYQLITSM--GVKPDST 303
I Y LL GR GL + QL SM VKPDS
Sbjct: 259 IDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSV 318
Query: 304 IWRTLLGACRIHKH---VTLGERVIEHLIELKAQ--ESGDYVLLLNLYSSVGDWEKVKEL 358
TLL + H V G + +H+++ ++ + Y +++L G +K L
Sbjct: 319 ---TLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNL 375
Query: 359 REFM 362
E M
Sbjct: 376 IEKM 379
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C AL G ++H + GY + L L+ MY++CG+L A V GMPE++VVSW
Sbjct: 45 CVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSW 104
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMISG + N A E F M RAG+ Q + + G LD +K
Sbjct: 105 TAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMF-VGSSLLDMYAK 163
Query: 263 D---------FGILP--NIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTL 308
F +LP ++ Y ++ + GL ++A ++L+ + G++ + + L
Sbjct: 164 SENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTAL 223
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
L A + G++V H + L+ + L L+++YS G + + + M E+
Sbjct: 224 LNALSGLSSMDYGKQV--HGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPER 281
Query: 366 GLQT-TPGCSTIGLKGVVHEFV 386
+ + G G+ HE V
Sbjct: 282 SVVSWNAMLMGYGRHGLAHEVV 303
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 300/540 (55%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y++ +E ++ MR++ I F S +K C L G Q HA+ R
Sbjct: 121 VIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLR 180
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR------------ 108
+ T++D+Y A K+FDE+P+RD ++W LI+ Y R
Sbjct: 181 GFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFE 240
Query: 109 -------------------NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
N + ++AL FD + E+SG + D+VT + ACA LGA
Sbjct: 241 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM--EKSGIRADEVTVAGYISACAQLGAS 298
Query: 150 EFGEKIHRYISEHGYGSKMNLC--NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
++ ++ + + GY ++ ++LI MYSKCG++ A VF M K+V S+S+MI
Sbjct: 299 KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMIL 358
Query: 208 GLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
GLA +G ++A++ F M + + P+ TF G L+ACSH GLVD+G M + FG+
Sbjct: 359 GLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGV 418
Query: 267 LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
P HY C+VDLLGRAG L +A +LI +M V+P +W LLGACRIH + + E E
Sbjct: 419 EPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAE 478
Query: 327 HLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS-TIGLKGVVHEF 385
HL EL+ G+Y+LL N+YSS GDW V +R+ + EKGL+ TP S + G +H+F
Sbjct: 479 HLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKF 538
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
+++HP +I L+E+ ++L GY +++S +++ K L H+EKLA+AF
Sbjct: 539 FPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAF 598
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+L T TI++ KNLR+C DCH F ++ S V R +I+RD +RFHHFR G CSC D+W
Sbjct: 599 SLLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHFRSGACSCGDFW 658
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 44/287 (15%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC--KLFDEIPQRDTVAWNVLISCYIR 108
QIH VLR G ++T L+ + + ++ + + R+ W +I Y
Sbjct: 68 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTI 127
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ +A+ ++ + +EE P T +L+AC +G L G + H +
Sbjct: 128 EGKFDEAIAMYGCMRKEE--ITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFV 185
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVS--------------------------- 201
+ N++I MY KCGS+ A +VF MPE+DV+S
Sbjct: 186 YVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTK 245
Query: 202 ----WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
W+AM++G A N ++A+E F M+++G+ D+ T G +SAC+ G +
Sbjct: 246 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG----ASKYA 301
Query: 258 DR---MSKDFGILPNIHHY--GCVVDLLGRAGLLDQAYQLITSMGVK 299
DR +++ G P+ H ++D+ + G +++A + SM K
Sbjct: 302 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNK 348
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 271/429 (63%), Gaps = 12/429 (2%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FDE+P+R+ VAW ++I+ Y+ + T+++ L + + + + VT +L AC+
Sbjct: 206 VFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLE-MELNYVTLCSILTACSQS 264
Query: 147 GALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
G L G +H Y + + + +++ MY+KCG + +AF+ FK MP+++VVSW+AM
Sbjct: 265 GDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAM 324
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
+SGLAM+G GR A++ F M + PDD TFT VLSACSH GLVD+G + + +G
Sbjct: 325 LSGLAMHGLGRAALDIFPQMFKEAK-PDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYG 383
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P + HY C+VDLLGRAG L++A L+ M ++P+ + +LLG+C IH + LGE ++
Sbjct: 384 ITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLL 443
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
+ L++L Q + ++LL N+Y+ G + LR+ + ++G++ PG S+I + G VH+F
Sbjct: 444 QELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQF 503
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHN---------LGAEEKGNALSY 436
D SHPR E+Y MLDE+ +L++AGY + + EEK AL
Sbjct: 504 SAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQEEKEQALFS 563
Query: 437 HSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFRE 496
HSEKLAI FG+++T PG + + KNLRIC DCH+ K++S +YNRE++IRDR RFH F+E
Sbjct: 564 HSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKE 623
Query: 497 GRCSCNDYW 505
G CSC DYW
Sbjct: 624 GSCSCCDYW 632
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 35 FAIKCCMKFCSLMGGLQIHARVLRDGYQ--LDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
F ++ C + SL G ++HA ++ G ++ L L+ Y++ +++A K+FDEIP
Sbjct: 18 FLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIP 77
Query: 93 Q--RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALE 150
+DTV W L+ C++R+ + +AL +F + R G KPD+VT + + CA LG +
Sbjct: 78 HSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRR--CGVKPDEVTLVCLFGGCARLGDVV 135
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G + H + + G G CN+++ MY+K G +G A VF M + VVSW+ ++ G+
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
+ R+ F M ++ +T +++ GL E + M D
Sbjct: 196 RSEGVRNGRVVFDEMPER----NEVAWTIMIAGYLDSGLTQESFALVREMIFDL 245
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y S +E F L +M + N + C + LM G +HA L+
Sbjct: 221 MIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKT 280
Query: 60 G-YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
+L+ + T ++D+Y+ + A K F ++PQR+ V+WN ++S + R AL +
Sbjct: 281 KEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDI 340
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
F + +E KPDDVT VL AC+H G ++ G
Sbjct: 341 FPQMFKE---AKPDDVTFTSVLSACSHSGLVDQG 371
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 290/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S EE +F +MR+ + N F + ++ C L G QIH V++ G
Sbjct: 318 MIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVG 377
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + LMD+Y+ + + +LF E P V+WN +I Y++ AL LF
Sbjct: 378 LDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFK 437
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E + +VT VL+ACA + ALE G +IH + Y + N+LI MY+K
Sbjct: 438 DM--LECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAK 495
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ A VF + E D VSW+AMISG +++G +A+++F +M PD TF G+
Sbjct: 496 CGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGI 555
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS+ GL+D G + M +++ I P HY C+V LLGR+G LD+A +L+ + +P
Sbjct: 556 LSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEP 615
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WR LL AC IH V LG + ++E++ ++ +VLL N+Y++ W V +R
Sbjct: 616 SVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRT 675
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M KG++ PG S I +G VH F V D SHP I ML+ +N + + GYV + +S
Sbjct: 676 SMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSS 735
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L ++ +K L HSE+LA+A+G++ TP + +R+ KNLRIC DCH K++S +
Sbjct: 736 VLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQ 795
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++IIRD RFHHF EG CSC DYW
Sbjct: 796 RDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 8/311 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ YS E LF +++ + NPF S +K + G +HA V + G
Sbjct: 116 LIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLG 175
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D+ + T L+D YS + A ++FD I +D V+W +++CY+ N+ ++L LF
Sbjct: 176 FDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFS 235
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G KP++ T VL+AC L G+ +H + Y ++ + LI +Y K
Sbjct: 236 RMRI--VGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK 293
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A +VF+ MP+ DV+ WS MI+ A + +AIE F M+R V P+ T +
Sbjct: 294 SGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASL 353
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ + G + K G+ N+ ++D+ + G ++ + QL + P
Sbjct: 354 LQACASLVDLQLGNQIHCHVVK-VGLDMNVFVSNALMDMYAKCGRMENSLQLFSE---SP 409
Query: 301 DST--IWRTLL 309
+ T W T++
Sbjct: 410 NCTDVSWNTVI 420
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 173/418 (41%), Gaps = 71/418 (16%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
SSPE Y++ + Q C++ G +H +++ G LD
Sbjct: 38 SSPEFNTYIYGSLLQS---------------CIRNGDCATGKYLHCEIIKKGNCLDLFAN 82
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L++ Y ++ +A KLFDE+P R+TV++ LI Y + R +A+ LF L E
Sbjct: 83 NILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHE 142
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
P + +L L A L F +H + + G+ S + +LI YS CG A
Sbjct: 143 LNPFVFSTVLKLLVSAEWAKLGFS--VHACVYKLGFDSDAFVGTALIDCYSVCGYAECAR 200
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS--- 245
+VF + KD+VSW+ M++ N ++++ F M+ G P++ TF VL AC
Sbjct: 201 QVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLE 260
Query: 246 --------------------------------HCGLVDEGMMFLDRMSKDFGILPNIHHY 273
G VD+ + + M KD ++P +
Sbjct: 261 VFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKD-DVIP----W 315
Query: 274 GCVVDLLGRAGLLDQAYQLITSMG---VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
++ ++ ++A ++ M V P+ +LL AC + LG ++ H+++
Sbjct: 316 SFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK 375
Query: 331 LKAQESGDYV--LLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFV 386
+ + +V L+++Y+ G E +L +P C+ + V+ +V
Sbjct: 376 V-GLDMNVFVSNALMDMYAKCGRMENSLQL--------FSESPNCTDVSWNTVIVGYV 424
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/472 (40%), Positives = 269/472 (56%), Gaps = 3/472 (0%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ 93
S C +L G Q+H L+ G + +L D+Y + KLF
Sbjct: 88 SSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGA 147
Query: 94 RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
RD V WN++I Y+ N DA F + R+ G PD+ + VL +CA+L AL G
Sbjct: 148 RDVVTWNIMIMAYVYNHNYEDACNSFWMMRRK--GSIPDEASYSSVLHSCANLAALYQGT 205
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG 213
IH I G+ + + +SLI MY+KCGSL AF++F+ +++VV W+A+I+ +G
Sbjct: 206 LIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHG 265
Query: 214 HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHY 273
H +E F M R G+ PD TF VLSACSH G V+EG + + M K GI P HY
Sbjct: 266 HANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHY 325
Query: 274 GCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA 333
C+VDLL RAG LD+A + I M +KPD+++W LL ACR H ++ +G+ V L +L+
Sbjct: 326 ACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEP 385
Query: 334 QESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
G+YVLL N+ + G + E+R M G++ PGCS I +K + F V D SH
Sbjct: 386 DNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHE 445
Query: 394 RINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPG 453
+ EIY+ML+++ + +K GYVAE + N E K +L YHSEK+A+AFG+L+ P G
Sbjct: 446 KTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAG 504
Query: 454 TTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
IR+ KNLR C DCH K S ++ RE+I+RD RFHHF G CSC DYW
Sbjct: 505 APIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 156/337 (46%), Gaps = 33/337 (9%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
MR+ + N + S + C + + G Q+H+ V + G+ + +++ L+D+Y+
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
A K+F+E+P L +NL D+V+ V
Sbjct: 61 MLMAEKVFEEMPT-----------------------LLLENLT------ALDEVSFSSVF 91
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
ACA+ G LEFG+++H + G + + + NSL MY KCG ++F +DVV
Sbjct: 92 SACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVV 151
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
+W+ MI N + DA SF M+R G PD+ +++ VL +C++ + +G + +++
Sbjct: 152 TWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQI 211
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
+ G + N+ ++ + + G L A+Q+ + + W ++ AC+ H H
Sbjct: 212 IRS-GFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR-NVVCWTAIIAACQQHGHANW 269
Query: 321 GERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
+ E + L+ DY+ +++ S+ +V+E
Sbjct: 270 VVELFEQM--LREGIKPDYITFVSVLSACSHTGRVEE 304
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + + E+ F MR+K + + S + C +L G IH +++R G
Sbjct: 156 MIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSG 215
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + ++ ++L+ +Y+ +A ++F+E R+ V W +I+ ++ + LF+
Sbjct: 216 FVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFE 275
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ RE G KPD +T + VL AC+H G +E G + I HG ++ + S
Sbjct: 276 QMLRE--GIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 333
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A + MP K D W A++S
Sbjct: 334 RAGELDRAKRFIELMPIKPDASVWGALLSA 363
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 288/505 (57%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + E +F +MR + + + + + C +L G QIHA + R
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + + L+D+YS A +F + R+ ++W +I Y +N + +A+ F
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KPDD T V+ +CA+L +LE G + H G + + N+L+ +Y K
Sbjct: 369 EMQMD--GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M D VSW+A+++G A G ++ I+ F M G+ PD TF GV
Sbjct: 427 CGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGV 486
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS GLV++G + D M KD GI+P HY C++DL R+G +A + I M P
Sbjct: 487 LSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSP 546
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL +CR+ ++ +G+ E+L+E Q YVLL +++++ G W +V LR
Sbjct: 547 DAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRR 606
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ ++ PGCS I K VH F DD SHP + IY+ L+ +N ++ GY +++S
Sbjct: 607 GMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSS 666
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ +K + +S+HSEKLAIAFG++ P IR+ KNLR+CVDCHN K +S +
Sbjct: 667 VLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITG 726
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD +RFH F +G CSC D+W
Sbjct: 727 RDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 36/341 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ +S + SP L+ + R++ + S I G +H +VLR
Sbjct: 116 LITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRL 175
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + + + L+D+Y+ +A ++F E+ + V +N LI+ +R + DA LF
Sbjct: 176 GFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLF 235
Query: 120 DNLNREES-----------------------------GCKPDDVTCLLVLQACAHLGALE 150
+ +S G D T +L AC L ALE
Sbjct: 236 QLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALE 295
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G++IH YI+ Y + + ++L+ MYSKC S+ +A VF+ M ++++SW+AMI G
Sbjct: 296 EGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF--LDRMSKDFGILP 268
N +A+ +F MQ G+ PDD T V+S+C++ ++EG F L +S G++
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS---GLMR 412
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
I +V L G+ G ++ A++L M D W L+
Sbjct: 413 YITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 452
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+LF +P+RD V++N LI+ + ++ L+ L REES +P +T ++ +
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREES-VRPTRITLSAMIMVASA 158
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV----- 200
L G +H + G+G+ + + L+ MY+K G + A VF+ M K VV
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 201 --------------------------SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+W+ M++GL NG +A++ F M+ GV D
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278
Query: 235 QTFTGVLSACSHCGLVDEG 253
TF +L+AC ++EG
Sbjct: 279 YTFGSILTACGALAALEEG 297
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 178/436 (40%), Positives = 263/436 (60%), Gaps = 3/436 (0%)
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
++ Y+ + A FD P+R++ +WN +I+ Y +N + AL LF +N E C
Sbjct: 1 MIAAYARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRC- 59
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
D VT + + ACA L AL G +H + G + + + +++ MY+KCG+L A V
Sbjct: 60 -DMVTFVAAIDACAGLSALVAGRSLHSIAAAAGLVAHVEISTAIVNMYAKCGNLDDATIV 118
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F + K+++SWS MI+ NGH A+++F AM G+FPD TF +LSACSH GL
Sbjct: 119 FSSIRNKNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFPDAVTFKSILSACSHAGLF 178
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+ G D + DFGI P + H+ C+VDLLGR+G L +A +L+ +M PD W TLL
Sbjct: 179 EHGFFHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLA 238
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
ACR+HK V G+R E L+EL ++ G YVLL N++++ GD + ++R+ M +G++
Sbjct: 239 ACRVHKSVERGKRAAEVLLELTSEIPGYYVLLSNIHAAAGDHAEKAKVRDLMEARGVRKK 298
Query: 371 PGCSTIGLKGVVHEFVV-DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PG STI + HEF + HP+ +I + L ++ +K GYV + T L + +E
Sbjct: 299 PGWSTIEINDRFHEFTAGEKFQHPKKQQILEELKRLSVLMKEDGYVPDTTEVLRLVNEDE 358
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K + L +HSEKLAIA G+++TPPGTT+RV KNLR+C DCH+ K +S + R++I+RD
Sbjct: 359 KESLLFFHSEKLAIACGLISTPPGTTLRVVKNLRVCSDCHSATKFISKITGRKIIVRDLN 418
Query: 490 RFHHFREGRCSCNDYW 505
RFHH G CSC DYW
Sbjct: 419 RFHHTENGVCSCGDYW 434
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 283/506 (55%), Gaps = 42/506 (8%)
Query: 37 IKCCMKFCSLMG----GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
+ C ++ C Q HA++++ GY L+T+L+ Y+ + A +L DE+P
Sbjct: 62 LNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMP 121
Query: 93 ---------------------------------QRDTVAWNVLISCYIRNQRTRDALCLF 119
+RD V WN +I +RN+R +AL F
Sbjct: 122 YWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFF 181
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ S +PD T V+ CA LG+ E +H + E L ++LI +YS
Sbjct: 182 REM--LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYS 239
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A +VF + DV W++MI+GLA++G DAI F M+ V PD TF G
Sbjct: 240 KCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIG 299
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L+ACSHCGLV++G + D M + + I P + HYG +VDLLGRAGL+++AY +I +M ++
Sbjct: 300 ILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPME 359
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IWR LL ACR K+ LGE I + L SGDY+LL N+Y S+ W+ + +R
Sbjct: 360 PDIVIWRALLSACRNFKNPELGEVAIAKISHLN---SGDYILLSNMYCSLEKWDSAERVR 416
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
E M G++ G S + L GV+H+F D SHP IY++L+ + ++ K+ G++
Sbjct: 417 EMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATD 476
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ EE+ L+ HSEKLA+A+ +L T PGT IRV+KNLR C DCH + K+LS +
Sbjct: 477 LVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLL 536
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+R +I+RDR+RFH F G CSC DYW
Sbjct: 537 SRVIIVRDRIRFHQFEGGLCSCRDYW 562
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F +M + + F + I C + S +H ++ QL+ L + L
Sbjct: 175 EEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSAL 234
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+DLYS + A K+F+ I D WN +I+ + DA+ +F + E P
Sbjct: 235 IDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEME--SVSP 292
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
D +T + +L AC+H G +E G + + H ++ +++ + + G + A+ +
Sbjct: 293 DSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAM 352
Query: 191 FKGMP-EKDVVSWSAMISG 208
K MP E D+V W A++S
Sbjct: 353 IKAMPMEPDIVIWRALLSA 371
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 283/506 (55%), Gaps = 42/506 (8%)
Query: 37 IKCCMKFCSLMG----GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP 92
+ C ++ C Q HA++++ GY L+T+L+ Y+ + A +L DE+P
Sbjct: 23 LNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMP 82
Query: 93 ---------------------------------QRDTVAWNVLISCYIRNQRTRDALCLF 119
+RD V WN +I +RN+R +AL F
Sbjct: 83 YWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFF 142
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ S +PD T V+ CA LG+ E +H + E L ++LI +YS
Sbjct: 143 REM--LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYS 200
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A +VF + DV W++MI+GLA++G DAI F M+ V PD TF G
Sbjct: 201 KCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIG 260
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L+ACSHCGLV++G + D M + + I P + HYG +VDLLGRAGL+++AY +I +M ++
Sbjct: 261 ILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPME 320
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
PD IWR LL ACR K+ LGE I + L SGDY+LL N+Y S+ W+ + +R
Sbjct: 321 PDIVIWRALLSACRNFKNPELGEVAIAKISHLN---SGDYILLSNMYCSLEKWDSAERVR 377
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
E M G++ G S + L GV+H+F D SHP IY++L+ + ++ K+ G++
Sbjct: 378 EMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATD 437
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
L ++ EE+ L+ HSEKLA+A+ +L T PGT IRV+KNLR C DCH + K+LS +
Sbjct: 438 LVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLL 497
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+R +I+RDR+RFH F G CSC DYW
Sbjct: 498 SRVIIVRDRIRFHQFEGGLCSCRDYW 523
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE F +M + + F + I C + S +H ++ QL+ L + L
Sbjct: 136 EEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSAL 195
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+DLYS + A K+F+ I D WN +I+ + DA+ +F + E P
Sbjct: 196 IDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEME--SVSP 253
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
D +T + +L AC+H G +E G + + H ++ +++ + + G + A+ +
Sbjct: 254 DSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAM 313
Query: 191 FKGMP-EKDVVSWSAMISG 208
K MP E D+V W A++S
Sbjct: 314 IKAMPMEPDIVIWRALLSA 332
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 292/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + + LF +M + + + F + + C ++ G Q+HA +LR
Sbjct: 161 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 220
Query: 60 GYQLDSQLMTTLMDLYST----------FEKSFE-----------------------ACK 86
+SQ+ L+ Y+ ++S E A +
Sbjct: 221 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 280
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F + RD VAW +I Y +N R +A+ LF ++ G +P+ T VL CA L
Sbjct: 281 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI--TCGPEPNSYTLAAVLSVCASL 338
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAM 205
L++G++IH ++ N++I MY++ GS A +F + K+ ++W++M
Sbjct: 339 ACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSM 398
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I LA +G G +A+ F M RAGV PD T+ GVLSACSH G V+EG + D++ +
Sbjct: 399 IVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQ 458
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P + HY C+VDLL RAGL +A + I M V+PD+ W +LL ACR+HK+ L E
Sbjct: 459 IAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAA 518
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L+ + SG Y + N+YS+ G W + + EK ++ G S ++ +H F
Sbjct: 519 EKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF 578
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
DDV HP+ + +Y M + +++K AG+V ++ S LH++ E K LS HSEKLAIAF
Sbjct: 579 GADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAF 638
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+++TP TT+RV KNLR+C DCH K +S V +RE+I+RD RFHHFR+G CSC DYW
Sbjct: 639 GLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 129/315 (40%), Gaps = 68/315 (21%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
+A +F E+P+RD V+W V++ R R +A+ L+ G P T VL +
Sbjct: 10 DARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL--LDMTADGFTPTQFTLTNVLSS 67
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS------------------- 183
CA A G K+H ++ + G GS + + NS++ MY KCG
Sbjct: 68 CAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSW 127
Query: 184 ------------LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGV 230
+ +A +F+ MP++ +VSW+AMI+G NG A++ F M + +
Sbjct: 128 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 187
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD+ T T VLSAC++ G V R G AY
Sbjct: 188 APDEFTITSVLSACANLGNV-------------------------------RIGKQVHAY 216
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
L T M +S + L+ V R+++ +E + LL Y +G
Sbjct: 217 ILRTEMAY--NSQVTNALISTYAKSGSVENARRIMDQSMETDLNVIS-FTALLEGYVKIG 273
Query: 351 DWEKVKELREFMNEK 365
D E +E+ MN +
Sbjct: 274 DMESAREMFGVMNNR 288
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
M++K G L A VF MPE+D VSW+ M+ GL G +AI++ M G P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 237 FTGVLSAC--SHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
T VLS+C + G V + F+ ++ G+ + V+++ G+ G + A +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKL----GLGSCVPVANSVLNMYGKCGDSETATTVF 116
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
M V+ S+ W ++ + L E + E +
Sbjct: 117 ERMPVRSVSS-WNAMVSLNTHLGRMDLAESLFESM 150
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 284/522 (54%), Gaps = 29/522 (5%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E + ++M QK + I C + L G HA V R+G + + ++
Sbjct: 307 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 366
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL---------- 122
D+Y K ACK+FD + + V WN LI+ +R+ AL +F +
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
Query: 123 -------------------NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHG 163
+ G K D VT + + AC +LGAL+ + I+ YI ++
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 164 YGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
M L +L+ M+S+CG A VF+ M ++DV +W+A I A+ G+ + AIE F
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRA 283
M + V DD F +L+A SH G VD+G M K G+ P I HYGC+VDLLGRA
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 606
Query: 284 GLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLL 343
GLL++A+ L+ SM +KP+ IW + L ACR HK+V E + +L ++ G +VLL
Sbjct: 607 GLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLS 666
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLD 403
N+Y+S G W V +R M EKG Q G S+I + G++ EF D SH +I ML
Sbjct: 667 NIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQ 726
Query: 404 EINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLR 463
EIN ++ GYV + T+ L ++ +EK + LS HSEKLA+A+G++ T G IRV KNLR
Sbjct: 727 EINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLR 786
Query: 464 ICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+C DCH+FAK++S +Y RE+ +RD R+H F+EG CSC D+W
Sbjct: 787 MCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 44/385 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM--RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR 58
++R Y+ S +E +++ M +P N F F + C K + G+Q+H V++
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDN-FTFPFLLSACSKIMAFSEGVQVHGVVVK 150
Query: 59 DGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G D + +L+ Y+ K K+FDE+ +R+ V+W LI+ Y ++A+CL
Sbjct: 151 MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCL 210
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F E G +P+ VT + + ACA L LE G+K+ ++E G S + N+L+ MY
Sbjct: 211 F--FEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMY 268
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
KCG + E+F +K++V ++ ++S +G + + M + G PD T
Sbjct: 269 MKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTML 328
Query: 239 GVLSAC-----------SHCGLVDEGMMFLDRMS-----------------KDFGILPN- 269
++AC SH + G+ LD +S K F + N
Sbjct: 329 STIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK 388
Query: 270 -IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI--WRTLLGACRIHKHVTLGERVIE 326
+ + ++ L R G L+ A ++ M P+S + W T++GA ++ E I+
Sbjct: 389 TVVTWNSLIAGLVRDGELELALRIFGEM---PESNLVSWNTMIGAMV---QASMFEEAID 442
Query: 327 HLIELKAQE-SGDYVLLLNLYSSVG 350
L E++ Q GD V ++ + S+ G
Sbjct: 443 LLREMQNQGIKGDRVTMVGIASACG 467
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 175/393 (44%), Gaps = 42/393 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS+ + +E LF +M + + NP AI C K L G ++ + G
Sbjct: 194 LINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELG 253
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ ++ L+D+Y + ++FDE ++ V +N ++S Y+++ + L + D
Sbjct: 254 VKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLD 313
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G +PD VT L + ACA LG L G+ H Y+ +G N+ N++I MY K
Sbjct: 314 EM--LQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMK 371
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG----------------- 223
CG A +VF M K VV+W+++I+GL +G A+ FG
Sbjct: 372 CGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAM 431
Query: 224 --------------AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
MQ G+ D T G+ SAC + G +D + K+ I +
Sbjct: 432 VQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN-DIHID 490
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
+ +VD+ R G A ++ +M K D + W A R+ + IE
Sbjct: 491 MQLGTALVDMFSRCGDPLNAMRVFENME-KRDVSAWT---AAIRVKAVEGNAKGAIELFD 546
Query: 330 ELKAQE--SGDYVL--LLNLYSSVGDWEKVKEL 358
E+ Q+ + D+V LL +S G ++ ++L
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQL 579
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 5/236 (2%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF--DEIPQRDTVAWNVLISCYIR 108
Q+H +L+ G ++L+ + + T E A F DE + N LI Y
Sbjct: 40 QLHCNMLKKGVFNINKLIAACVQM-GTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAA 98
Query: 109 NQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKM 168
+ ++A+ ++ ++ G PD+ T +L AC+ + A G ++H + + G +
Sbjct: 99 SGLCKEAIFIYLHM-IIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDL 157
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA 228
+ NSLI Y+ CG + + +VF M E++VVSW+++I+G ++ ++A+ F M
Sbjct: 158 FVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEV 217
Query: 229 GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
GV P+ T +SAC+ ++ G + M+ + G+ N ++D+ + G
Sbjct: 218 GVEPNPVTMVCAISACAKLKDLELGKKVCNLMT-ELGVKSNTLVVNALLDMYMKCG 272
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 6/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A +S EE L +M+ + I + C +L I+ + ++
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+D QL T L+D++S A ++F+ + +RD AW I + A+ LFD
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ +++ K DD + +L A +H G ++ G ++ + + HG ++ ++ +
Sbjct: 547 EMLKQD--VKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLG 604
Query: 180 KCGSLGMAFEVFKGMPEK--DVVSWSAMISG 208
+ G L AF++ K MP K DV+ W + ++
Sbjct: 605 RAGLLEEAFDLMKSMPIKPNDVI-WGSFLAA 634
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 292/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + + LF +M + + + F + + C ++ G Q+HA +LR
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 326
Query: 60 GYQLDSQLMTTLMDLYST----------FEKSFE-----------------------ACK 86
+SQ+ L+ Y+ ++S E A +
Sbjct: 327 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F + RD VAW +I Y +N R +A+ LF ++ G +P+ T VL CA L
Sbjct: 387 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM--ITCGPEPNSYTLAAVLSVCASL 444
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAM 205
L++G++IH ++ N++I MY++ GS A +F + K+ ++W++M
Sbjct: 445 ACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSM 504
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I LA +G G +A+ F M RAGV PD T+ GVLSACSH G V+EG + D++ +
Sbjct: 505 IVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQ 564
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P + HY C+VDLL RAGL +A + I M V+PD+ W +LL ACR+HK+ L E
Sbjct: 565 IAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAA 624
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L+ + SG Y + N+YS+ G W + + EK ++ G S ++ +H F
Sbjct: 625 EKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF 684
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
DDV HP+ + +Y M + +++K AG+V ++ S LH++ E K LS HSEKLAIAF
Sbjct: 685 GADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAF 744
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+++TP TT+RV KNLR+C DCH K +S V +RE+I+RD RFHHFR+G CSC DYW
Sbjct: 745 GLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 146/353 (41%), Gaps = 72/353 (20%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS---FEACKLFDEIPQRDTVAWNVLIS 104
GGL+ AR L D L + + T L S F KS +A +F E+P+RD V+W V++
Sbjct: 79 GGLR-DARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
R R +A+ L+ G P T VL +CA A G K+H ++ + G
Sbjct: 138 GLNRAGRFGEAIKTL--LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGL 195
Query: 165 GSKMNLCNSLIAMYSKCGS-------------------------------LGMAFEVFKG 193
GS + + NS++ MY KCG + +A +F+
Sbjct: 196 GSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFES 255
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDE 252
MP++ +VSW+AMI+G NG A++ F M + + PD+ T T VLSAC++ G V
Sbjct: 256 MPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNV-- 313
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
R G AY L T M +S + L+
Sbjct: 314 -----------------------------RIGKQVHAYILRTEMAY--NSQVTNALISTY 342
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
V R+++ +E + LL Y +GD E +E+ MN +
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVI-SFTALLEGYVKIGDMESAREMFGVMNNR 394
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 295/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ Y+ + + F +M + + F + + C L G Q+H+ +LR
Sbjct: 266 IIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRT 325
Query: 60 GYQLDSQLM---------------------------------TTLMDLYSTFEKSFEACK 86
G SQ+M T L++ Y + +A +
Sbjct: 326 GMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQARE 385
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD + RD +AW +I Y +N + +A+ LF ++ R SG +P+ T VL ACA L
Sbjct: 386 VFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIR--SGPEPNSHTLAAVLSACASL 443
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAM 205
L +G++IH +++ N++I +Y++ GS+ +A VF + K+ V+W++M
Sbjct: 444 AYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSM 503
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I LA +G G AI F M R GV PD T+ GV SAC+H G +D+G + ++M + G
Sbjct: 504 IVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHG 563
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I+P + HY C+VDLL RAGLL +A++ I M V PD+ +W +LL ACR+ K+ L E
Sbjct: 564 IVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAA 623
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L+ + SG Y L N+YS+ G W + + +K ++ G S ++ VH F
Sbjct: 624 EKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVF 683
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
DDV HP+ + I + E+ +++K AG+V ++ S LH++ E K LS HSEKLAIAF
Sbjct: 684 GADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAF 743
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+++TP TT+R+ KNLR+C DCH K +S V +RE+I+RD RFHHFR+G CSC DYW
Sbjct: 744 GLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 10/300 (3%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
+L+ +Y+ + +A +F ++P+RD V+W V++ R R DA+ F ++ E G
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE--G 158
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
P VL +CA A G K+H ++ + G S + + NS++ MY KCG A
Sbjct: 159 LAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETAR 218
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
VF+ M + SW+AM+S G A+ F M+ + ++ +++ + G
Sbjct: 219 AVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIV----SWNAIIAGYNQNG 274
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIW 305
L D + F RM + P+ V+ +L Q+ I G+ S I
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334
Query: 306 RTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
L+ V R+++ + + + LL Y +GD ++ +E+ + MN +
Sbjct: 335 NALISTYAKSGSVETARRIMDKAV-VADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 291/497 (58%), Gaps = 3/497 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS P + F +M + N F S IK G Q+H ++ G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + + L+DLY+ + +A +FD + R+ V+WN LI+ + R T AL LF
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G +P + + AC+ G LE G+ +H Y+ + G N+L+ MY+K
Sbjct: 252 GMLRD--GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A ++F + ++DVVSW+++++ A +G G++A+ F M+R G+ P++ +F V
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACSH GL+DEG + + M KD GI+P HY VVDLLGRAG L++A + I M ++P
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ IW+ LL ACR+HK+ LG EH+ EL + G +V+L N+Y+S G W +R+
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M E G++ P CS + ++ +H FV +D HP+ EI + +E+ ++K GYV + +
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 548
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+ ++ +E+ L YHSEK+A+AF +L TPPG+TI + KN+R+C DCH K+ S V
Sbjct: 549 VIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVG 608
Query: 481 REVIIRDRLRFHHFREG 497
RE+I+RD RFHHF++
Sbjct: 609 REIIVRDTNRFHHFKDA 625
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
IP + + +K C F L+ G +HA +L+ ++ D + TL+++Y+ EA
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
K+F+++PQRD V W LIS Y ++ R DAL F+ + R G P++ T V++A A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR--FGYSPNEFTLSSVIKAAAA 173
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
G ++H + + G+ S +++ ++L+ +Y++ G + A VF + ++ VSW+A+
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I+G A A+E F M R G P ++ + ACS G +++G M K
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
L ++D+ ++G + A ++ + K D W +LL A H
Sbjct: 294 KLVAFAG-NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|387169524|gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
Length = 511
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 263/422 (62%), Gaps = 4/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+ ++ + WN++I Y+RN + +AL N+ S KP+ + L AC
Sbjct: 94 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKTLKNM-LSFSDIKPNKFSFASSLAAC 152
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG L + +H + + G L ++L+ +Y+KCG + + EVF + DV W+
Sbjct: 153 ARLGDLHHAKWVHSLMIDAGIELNAILSSALVDVYAKCGDIETSREVFYSVKRNDVSIWN 212
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI+G A +G +AI F M+ V PD TF G+L+ACSHCGL+ +G ++ D MS+
Sbjct: 213 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTACSHCGLLGKGKVYFDIMSQR 272
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
F I P + HYG +VDLLGRAG + +AY+LI SM ++PD IWR+LL + R +K+ LGE
Sbjct: 273 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 332
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
I++L + K SGDYVLL N+YS+ WE +++RE M ++G++ G S + GV+H
Sbjct: 333 AIQNLSKAK---SGDYVLLSNIYSTTKKWESAQKVRELMTKEGIRKAKGKSWVEYGGVIH 389
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
F D SH I IY++L+ + ++ K G+V++ L ++ EEK L+YHSEKLA+
Sbjct: 390 RFKAGDTSHIEIKAIYKVLEGLIQKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 449
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+ +L + PGT IR+ KN+R+C DCHN+ K +S + NR +I+RDR+RFH F +G CSC D
Sbjct: 450 AYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCKD 509
Query: 504 YW 505
YW
Sbjct: 510 YW 511
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 5/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + EE + M I N F+ + ++ C + L +H+ ++
Sbjct: 112 MIGGYVRNVQYEEALKTLKNMLSFSDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDA 171
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +L++ L + L+D+Y+ + ++F + + D WN +I+ + + +A+ +F
Sbjct: 172 GIELNAILSSALVDVYAKCGDIETSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 231
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMY 178
+ E PD +T L +L AC+H G L G+ +S+ K+ +++ +
Sbjct: 232 SEMEAEH--VSPDSITFLGLLTACSHCGLLGKGKVYFDIMSQRFSIQPKLEHYGAMVDLL 289
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + A+E+ + MP E DVV W +++S
Sbjct: 290 GRAGRVKEAYELIESMPIEPDVVIWRSLLSS 320
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 279/507 (55%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV AY+ + P E LF +M + N + C L G +H RV G
Sbjct: 133 MVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQG 192
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q + T L++LY + A + F +I +++ VAW+ + + Y RN R RDA+ +
Sbjct: 193 IQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLH 252
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG--SKMNLCNSLIAMY 178
++ E G P+ T + VL ACA + AL+ G +IH G G S + + +L+ MY
Sbjct: 253 RMDLE--GLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMY 310
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
SKCG+L +A ++F + D+V W+++I+ A +G A+E F M+ G+ P TFT
Sbjct: 311 SKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFT 370
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL ACSH G++D+G D GI P H+GC+VDLLGRAG + + L+ M
Sbjct: 371 SVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPF 430
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P W LGACR ++++ E+L +L ++ YVLL N+Y+ G W V +
Sbjct: 431 EPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARM 490
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
R+ M G S I +K VHEF+ D+ HPRI EI+ L + K +K AGYV +
Sbjct: 491 RQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDT 550
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E K + YHSEKLA+AF +L TP G+ IRV KNLR+C DCH +K +S +
Sbjct: 551 EMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKL 610
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
NRE+++RD RFH F+ G CSC DYW
Sbjct: 611 VNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 8/329 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY + + + F M + I S + C + G I +L G
Sbjct: 32 LIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTG 91
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +S + T L+ +Y +A +F + RD VAW+ +++ Y RN R+AL LF
Sbjct: 92 IEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFR 151
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + G P+ VT + L ACA LG L G +H+ + G S + + +L+ +Y K
Sbjct: 152 QMDLD--GVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGK 209
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A E F + EK+VV+WSA+ + A N RDAI M G+ P+ TF V
Sbjct: 210 CGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSV 269
Query: 241 LSACSHCGLVDEGMMFLDRMSK-DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
L AC+ + +G +R G+ +++ +V++ + G L A + +
Sbjct: 270 LDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIA-H 328
Query: 300 PDSTIWRTLLGACRIH----KHVTLGERV 324
D +W +L+ H K + L ER+
Sbjct: 329 LDLVLWNSLIATNAQHGQTEKALELFERM 357
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 134/318 (42%), Gaps = 40/318 (12%)
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
++ YS K FDE+P D V+WN LI+ YI N+ F + + G
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQ--GIN 58
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P +V + L AC + G I I G + + +L++MY K G A V
Sbjct: 59 PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASV 118
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F M +DVV+WSAM++ A NGH R+A+ F M GV P+ T L AC+ G +
Sbjct: 119 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 178
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM-------------- 296
G + R+ GI + +V+L G+ G ++ A + +
Sbjct: 179 RSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAA 237
Query: 297 --------------------GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-E 335
G+ P+ST + ++L AC + G R+ E L E
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297
Query: 336 SGDYVL--LLNLYSSVGD 351
S YVL L+N+YS G+
Sbjct: 298 SDVYVLTALVNMYSKCGN 315
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 285/528 (53%), Gaps = 33/528 (6%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P G +F +M + N S + C + L G IH +R G + + +
Sbjct: 214 PRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSA 273
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR------ 124
L+ LY+ +A +FD +P RD V+WN +++ Y N+ L LF ++
Sbjct: 274 LVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEAD 333
Query: 125 ---------------------------EESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
+ G KP+ +T L AC+ L +L G+++H
Sbjct: 334 EATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHC 393
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
Y+ H + +L+ MY+KCG L ++ VF + KDVV+W+ MI AM+G+GR+
Sbjct: 394 YVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGRE 453
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
+ F +M ++G+ P+ TFTGVLS CSH LV+EG+ + M +D + P+ +HY C+V
Sbjct: 454 VLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMV 513
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
D+ RAG L +AY+ I M ++P ++ W LLGACR++K+V L + L E++ G
Sbjct: 514 DVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPG 573
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
+YV L N+ + W + E R M E+G+ TPGCS + + VH FVV D ++ ++
Sbjct: 574 NYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDK 633
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIR 457
IY LDE+ +++K AGY + L ++ EEK +L HSEKLA+AFG+L ++IR
Sbjct: 634 IYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIR 693
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V KNLRIC DCHN K +S V +I+RD LRFHHFR G CSC D W
Sbjct: 694 VFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 130/270 (48%), Gaps = 5/270 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI-PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ A++ P E L+ +R + I P N + A K C ++H +R
Sbjct: 103 LISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA-KACGASGDASRVKEVHDDAIRC 161
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G D+ L L+ Y + A ++FD++ +D V+W + SCY+ R L +F
Sbjct: 162 GMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVF 221
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +G KP+ VT +L AC+ L L+ G IH + HG + +C++L+++Y+
Sbjct: 222 CEMGW--NGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYA 279
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+C S+ A VF MP +DVVSW+ +++ N + F M GV D+ T+
Sbjct: 280 RCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNA 339
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
V+ C G ++ + L +M ++ G PN
Sbjct: 340 VIGGCMENGQTEKAVEMLRKM-QNLGFKPN 368
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFD IPQ D + LIS + +A+ L+ +L G KP + L V +AC
Sbjct: 85 AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASL--RARGIKPHNSVFLTVAKAC 142
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
G +++H G S L N+LI Y KC + A VF + KDVVSW+
Sbjct: 143 GASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWT 202
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+M S G R + F M GV P+ T + +L ACS + G + +
Sbjct: 203 SMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRA-IHGFAVR 261
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
G++ N+ +V L R + QA +L+ + D W +L A
Sbjct: 262 HGMIENVFVCSALVSLYARCLSVKQA-RLVFDLMPHRDVVSWNGVLTA 308
>gi|297728815|ref|NP_001176771.1| Os12g0128300 [Oryza sativa Japonica Group]
gi|255670010|dbj|BAH95499.1| Os12g0128300 [Oryza sativa Japonica Group]
Length = 587
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/450 (40%), Positives = 269/450 (59%), Gaps = 27/450 (6%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC------ 117
D L L+ +++ + ++FD I D AWN L+S Y R R RD C
Sbjct: 157 DRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYAR-LRARDVACATSAAD 215
Query: 118 -LFDNLNREES-GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ + R S +P+++T + V+ AC LGA+ G +L+
Sbjct: 216 AILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHG------------------VWALV 257
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
MY+ CG L +A +VF ++D ++AM+ GLA++GHGR A+ M AGV D
Sbjct: 258 EMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGV 317
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
T V+ AC+H GLVDEG+ + DRM +FGI P I HYGC++D+L RAG L+ A +LI
Sbjct: 318 TVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHE 377
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M + P++ I+R+L+ AC IH + LGE++I L+ L+ +SG++VL+ N Y+ WE
Sbjct: 378 MLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDA 437
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
K+ R+ M G+ PG S + + GV+HEF+V D +HP EIY M++EI +L G
Sbjct: 438 KKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRR 497
Query: 416 AEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVL 475
+ +S L ++ E+K + LSYHSE+LAIAF ++A+ PG IR+ KNLR+C DCH AK++
Sbjct: 498 SSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLV 557
Query: 476 SGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
S VY RE+++RDR RFHHFR+G CSC D+W
Sbjct: 558 SRVYGREIVMRDRTRFHHFRDGVCSCGDFW 587
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG-------- 208
+++ H L +L+ ++++CG + VF + D+ +W+A++S
Sbjct: 147 KFLGAHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLRARD 206
Query: 209 LAMNGHGRDAI-ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
+A DAI E F M + P++ T V+ AC G V G+ L M
Sbjct: 207 VACATSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWALVEM------- 259
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
+ GC G LD A Q+ + + D+ + +L +H H
Sbjct: 260 ----YAGC--------GRLDLAEQVFAAASDR-DTRCYNAMLHGLAVHGH 296
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 291/534 (54%), Gaps = 71/534 (13%)
Query: 41 MKFCSLMGGLQ----IHARVLRDGYQLDSQLMTTLMDLYS---------TFEKSFEACK- 86
+K C+LM L+ +H ++R G D LM++YS T++K F+ K
Sbjct: 113 LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKT 172
Query: 87 -------------------LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
+F+ +P+RD V+WN +IS +N DAL + + +
Sbjct: 173 SDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNAD- 231
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+PD T VL A L G++IH Y +GY + + + +SLI MY+KC + +
Sbjct: 232 -LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDS 290
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA------------------- 228
VF +P+ D +SW+++I+G NG + ++ F M A
Sbjct: 291 CRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHL 350
Query: 229 -----------------GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
GV P+ F VL+ACSH GLVDE + + M++D+ I+P +
Sbjct: 351 TTLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLE 410
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 331
HY V DLLGR G L++AY+ I+ M ++P ++W TLL ACR+HK++ L E+V + L +
Sbjct: 411 HYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTV 470
Query: 332 KAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVS 391
Q G YVLL N+YS+ G W+ ++LR M +KG++ P CS I +K VH FV D S
Sbjct: 471 DPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKS 530
Query: 392 HPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATP 451
HP + I + L + +Q++ GYV + T LH++ E+K L HSE+LAI FG+++TP
Sbjct: 531 HPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTP 590
Query: 452 PGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
GTTIRV KNLR+CVDCH K +S + RE+++RD RFHHF++G+CSC D+W
Sbjct: 591 AGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 190/461 (41%), Gaps = 93/461 (20%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRN 109
Q+HA++LR S L++T++ +YS ++ +F+ +P T+AW +I CY +
Sbjct: 26 QLHAQILRTSLPSPS-LLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+L F + SG PD VL++C + L FGE +H I G G +
Sbjct: 85 GLFLHSLSFF--IQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142
Query: 170 LCNSLIAMYSKCGS-----------------------------LGMAFEVFKGMPEKDVV 200
CN+L+ MYSK S LG +VF+ MP++D+V
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH-------------- 246
SW+ +ISG A NG DA+ M A + PD T + VL +
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262
Query: 247 ---------------------CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGL 285
C VD+ + + GI N GCV + G+
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV-----QNGM 317
Query: 286 LDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
D+ + M +KP+ + +++ AC + LG+++ ++I ++ + +YV
Sbjct: 318 FDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKP-NYVAF 376
Query: 343 LNLYSSVGDWEKVKELREFMNE--KGLQTTPG----CSTIGLKGVV------HEFVVDDV 390
+ + ++ V E ++ N + + PG + L G V +EF+ D
Sbjct: 377 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 436
Query: 391 SHPRINEIYQMLD--EINKQLKIAGYVAE--ITSELHNLGA 427
P + +L ++K +++A V++ T + N+GA
Sbjct: 437 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGA 477
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 140/297 (47%), Gaps = 25/297 (8%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ + +M + + F S + ++ +L+ G +IH +R+GY D + ++L
Sbjct: 218 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 277
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+D+Y+ + ++C++F +PQ D ++WN +I+ ++N + L F + + KP
Sbjct: 278 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM--LIAKIKP 335
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM---AF 188
+ V+ ++ ACAHL L G+++H YI G K N + +A+ + C G+ A+
Sbjct: 336 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRME-GVKPNYV-AFMAVLTACSHAGLVDEAW 393
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-------PDDQTFTGVL 241
+ F M + +I GL D + G ++ A F P ++ +L
Sbjct: 394 KYFNSMTQD-----YRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLL 448
Query: 242 SACSHCGLVDEGMMFLDRMSKD-FGILP-NIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+AC V + + +++SK F + P NI Y + ++ AG A +L +M
Sbjct: 449 AACR----VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAM 501
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 296/505 (58%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + P + ++ +MR+ + + ++ C G +H +LR
Sbjct: 175 MVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHA 234
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Q+D + T+L+D+Y+ +A ++F+ +P R+ V+W+ LIS + +AL LF
Sbjct: 235 MQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFR 294
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + SG P+ + L AC+ LG L+ G+ IH +I +M + ++I MYSK
Sbjct: 295 MM--QVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRM-VGTAVIDMYSK 351
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL A +F + +D++SW+ MI+ +G GRDA+ F M+R V PD TF +
Sbjct: 352 CGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASL 411
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSA SH GLV+EG + + M ++GI P H C+VDLL R+GL+++A L+ S+ KP
Sbjct: 412 LSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKP 471
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+I LL C + + LGE E ++EL+ + G L+ NLY++ +W KV+E+R+
Sbjct: 472 TISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRK 531
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + G + PGCS+I ++G +H FV++D SHP+ +I QM+ +++ +++ GY+ +
Sbjct: 532 LMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEF 591
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
H+L K LS HSE+LA AFG+L T PGT + V KNLR+C DCH+ K +S + +
Sbjct: 592 VYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIAD 651
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHF++G CSC DYW
Sbjct: 652 REIVVRDAKRFHHFKDGACSCGDYW 676
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 46/449 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A+S +SP E +F + P + + A+ C + L G + R G
Sbjct: 75 LLAAHSRGASPHEALRVFRALPPAARP-DSTTFTLALSACARLGDLATGEVVTDRASGAG 133
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D + +++++LY+ +A K+FD + +RD V W+ +++ ++ + A+ ++
Sbjct: 134 YGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYM 193
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R+ G + D+V + V+QACA G G +H Y+ H + + SL+ MY+K
Sbjct: 194 RMRRD--GLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAK 251
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G A VF+ MP ++ VSWSA+IS LA G+ +A+ F MQ +G+ P+ G
Sbjct: 252 NGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGA 311
Query: 241 LSACSHCGLVDEG---------MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
L ACS GL+ G + LDRM V+D+ + G L A Q
Sbjct: 312 LLACSDLGLLKLGKSIHGFILRTLELDRMVGT-----------AVIDMYSKCGSLSSA-Q 359
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVG 350
++ V D W ++ C H G + E+K E D+ +L S++
Sbjct: 360 MLFDKVVSRDLISWNVMIACCGAHGR---GRDALSLFQEMKRNEVRPDHATFASLLSALS 416
Query: 351 DWEKVKELREF----MNEKGLQTTPG-------CSTIGLKGVVHE---FVVDDVSHPRIN 396
V+E + + +NE G++ PG + G+V E V S P I+
Sbjct: 417 HSGLVEEGKFWFNCMVNEYGIE--PGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTIS 474
Query: 397 EIYQMLDEI--NKQLKIAGYVAEITSELH 423
+ +L N +L++ AE EL
Sbjct: 475 ILVALLSGCLNNNKLELGESTAEKILELQ 503
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
AWN L++ + R +AL +F L +PD T L L ACA LG L GE +
Sbjct: 71 AWNALLAAHSRGASPHEALRVFRAL---PPAARPDSTTFTLALSACARLGDLATGEVVTD 127
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
S GYG+ + +C+S++ +Y+KCG++ A +VF M ++D V+WS M++G G
Sbjct: 128 RASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQ 187
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYG 274
AIE + M+R G+ D+ GV+ AC+ G G +L R + ++ +
Sbjct: 188 AIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVIST---- 243
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+VD+ + GL DQA ++ M + D + W L+
Sbjct: 244 SLVDMYAKNGLFDQARRVFELMPHRNDVS-WSALI 277
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 302/506 (59%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ A + ++ E L +M+++ P N F S + C C+++ +Q+HA ++
Sbjct: 115 VIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAA 174
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + T L+ +Y+ +A ++F+ +P+++ V W+ +++ Y++N +AL +F
Sbjct: 175 IDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFR 234
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N + G D + ACA L L G+++H + G+GS + + +SLI MY+K
Sbjct: 235 NA--QLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAK 292
Query: 181 CGSLGMAFEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
CG + A+ VF+G+ E + +V W+AMISG A + +A+ F MQ+ G FPDD T+
Sbjct: 293 CGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVC 352
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL+ACSH GL +EG + D M + + P++ HY C++D+LGRAGL+ +AY LI M
Sbjct: 353 VLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFN 412
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
S++W +LL +C+I+ ++ E ++L E++ +G+++LL N+Y++ W++V R
Sbjct: 413 ATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARAR 472
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ + E ++ G S I +K +H F V + +HP+I++IY LD + +LK Y + +
Sbjct: 473 KLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTS 532
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
++LH++ K L +HSEKLAI FG++ P IR+ KNLRIC DCH F K++S
Sbjct: 533 NDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKST 592
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD RFHHF++G CSC ++W
Sbjct: 593 SREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 189/413 (45%), Gaps = 24/413 (5%)
Query: 35 FAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR 94
+ ++ C K S MGG HA+++R G ++D L+++YS A K F+E+P +
Sbjct: 48 YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK 107
Query: 95 DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEK 154
V+WN +I +N R+AL L + RE G ++ T VL CA A+ +
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQRE--GTPFNEFTISSVLCNCAFKCAILECMQ 165
Query: 155 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 214
+H + + S + +L+ +Y+KC S+ A ++F+ MPEK+ V+WS+M++G NG
Sbjct: 166 LHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGF 225
Query: 215 GRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG 274
+A+ F Q G D + +SAC+ + EG + +S G NI+
Sbjct: 226 HEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQ-VHAISHKSGFGSNIYVSS 284
Query: 275 CVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
++D+ + G + +AY + + +W ++ +H E +I L E K Q
Sbjct: 285 SLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISG--FARHARAPEAMI--LFE-KMQ 339
Query: 335 ESG------DYVLLLNLYSSVGDWEKVKELREFM------NEKGLQTTPGCSTIGLKGVV 382
+ G YV +LN S +G E+ ++ + M + L + +G G+V
Sbjct: 340 QRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV 399
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV--AEITSE-LHNLGAEEKGN 432
H+ D + N M + KI G + AEI ++ L + GN
Sbjct: 400 HK-AYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGN 451
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 290/493 (58%), Gaps = 7/493 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI---PTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
+V Y+ PE L+ +M+++ N F S A+ G ++H V+
Sbjct: 132 LVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVV 191
Query: 58 RDGYQL---DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
R G D+ L + L D+Y+ + +A ++FD +P RD V+W ++ Y R +
Sbjct: 192 RRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGE 251
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
LF ++ R G +P++ T VL+ACA FG ++H +++ G G ++L
Sbjct: 252 GFRLFLHMLRTR-GVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESAL 310
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ MYSKCG +G A VF+ M + D+VSW+A+ISG A NG +A+ F R+G+ PD
Sbjct: 311 LRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDH 370
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
TF GVLSAC+H GLVD+G+ + + + I HY CV+DLL R+G ++A ++I
Sbjct: 371 VTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIG 430
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEK 354
+M VKP+ +W +LLG CRIHK+V L R E L E++ + YV L N+Y+SVG +++
Sbjct: 431 NMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDE 490
Query: 355 VKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGY 414
V+++R M KG+ P S I + VH F+V D SHP+ +EIY +L ++ ++ GY
Sbjct: 491 VEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGY 550
Query: 415 VAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
VA+I LH++ E+K + YHSE+LA+AFG++A+P G+ I+V KNLRIC DCH K+
Sbjct: 551 VADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKL 610
Query: 475 LSGVYNREVIIRD 487
+S + R++I+RD
Sbjct: 611 ISQIVQRDIIVRD 623
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 150/360 (41%), Gaps = 54/360 (15%)
Query: 50 LQIHARVLRDGYQLDSQLMT-------TLMDLYSTFEKSFEACK-LFDEIPQRDTVAWNV 101
L H L D L S + TL+ S + + + LFD +PQRD AW+
Sbjct: 72 LSSHPATLPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSA 131
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPD-DVTCLLVLQACAHLGALEFGEKIHRYIS 160
L+S Y R+ + AL L+ + E D + T L A A G ++H ++
Sbjct: 132 LVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVV 191
Query: 161 EHGY---GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
G G L ++L MY+KCG + A VF MP +D VSW+AM+ G G +
Sbjct: 192 RRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGE 251
Query: 218 AIESFGAMQRA-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK-------------- 262
F M R GV P++ T+ GVL AC+ + G RM+K
Sbjct: 252 GFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALL 311
Query: 263 -------DFG---------ILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDST 303
D G P++ + V+ + G ++A + + G+KPD
Sbjct: 312 RMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHV 371
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQ-----ESGDYVLLLNLYSSVGDWEKVKEL 358
+ +L AC H L ++ +E +K Q + Y +++L S G +E+ +++
Sbjct: 372 TFVGVLSAC---AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKM 428
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 292/540 (54%), Gaps = 37/540 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y+ + + LF +M + + + F + + C ++ G Q+HA +LR
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 326
Query: 60 GYQLDSQLMTTLMDLYST----------FEKSFE-----------------------ACK 86
+SQ+ L+ Y+ ++S E A +
Sbjct: 327 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+F + RD VAW +I Y +N R +A+ LF ++ G +P+ T VL CA L
Sbjct: 387 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM--ITCGPEPNSYTLAAVLSVCASL 444
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAM 205
L++G++IH ++ N++I MY++ GS A +F + K+ ++W++M
Sbjct: 445 ACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSM 504
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
I LA +G G +A+ F M RAGV PD T+ GVLSACSH G V+EG + D++ +
Sbjct: 505 IVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQ 564
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVI 325
I P + HY C+VDLL RAGL +A + I M V+PD+ W +LL ACR+HK+ L E
Sbjct: 565 IAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAA 624
Query: 326 EHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEF 385
E L+ + SG Y + N+YS+ G W + + EK ++ G S ++ +H F
Sbjct: 625 EKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF 684
Query: 386 VVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAF 445
DDV HP+ + +Y M + +++K AG+V ++ S LH++ E K LS HSEKLAIAF
Sbjct: 685 GADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAF 744
Query: 446 GVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
G+++TP TT+RV KNLR+C DCH K +S V +RE+I+RD RFHHFR+G CSC DYW
Sbjct: 745 GLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 145/353 (41%), Gaps = 72/353 (20%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKS---FEACKLFDEIPQRDTVAWNVLIS 104
GGL+ AR L D L + + T L S F KS +A +F E+P+RD V+W V++
Sbjct: 79 GGLR-DARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
R R +A+ L+ G P T VL +CA A G K+H ++ + G
Sbjct: 138 GLNRAGRFGEAIKTL--LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGL 195
Query: 165 GSKMNLCNSLIAMYSKCGS-------------------------------LGMAFEVFKG 193
GS + + NS++ MY KCG + +A +F+
Sbjct: 196 GSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFES 255
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDE 252
MP + +VSW+AMI+G NG A++ F M + + PD+ T T VLSAC++ G V
Sbjct: 256 MPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNV-- 313
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
R G AY L T M +S + L+
Sbjct: 314 -----------------------------RIGKQVHAYILRTEMAY--NSQVTNALISTY 342
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
V R+++ +E + LL Y +GD E +E+ MN +
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVI-SFTALLEGYVKIGDMESAREMFGVMNNR 394
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/509 (38%), Positives = 285/509 (55%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS++ E LF+++ N I F + +HA V++
Sbjct: 284 LISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKAR 343
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D+ + T L LY A +FD + ++ +WN +IS Y +N T A+ LF
Sbjct: 344 LDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQ 403
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E +P+ +T L ACAHLGAL G+ +HR IS+ + + +LI MY+K
Sbjct: 404 LM--QELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAK 461
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M K+VVSW+AMISG ++G G +A++ + M A + P TF V
Sbjct: 462 CGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSV 521
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ ACSH GLVDEG M+ ++ I P I H C+VDLLGRAG L++A +LI+ P
Sbjct: 522 IYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEF---P 578
Query: 301 DSTI----WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
S I W LLGAC +HK+ L + + L EL ++ +G YVLL NLY+S + +
Sbjct: 579 QSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAA 638
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R+ + L TPGC+ I + H F+ D HP+ IY L+ + ++ AGY
Sbjct: 639 VVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQP 698
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ L+++ EEK + + HSEKLAIAFG+L+T PGT IR+ KNLR+C+DCHN K +S
Sbjct: 699 VTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFIS 758
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V R +++RD RFHHFR+G CSC DYW
Sbjct: 759 KVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 152/351 (43%), Gaps = 41/351 (11%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H + GY D+ + + L LY + +A K+FD +P DT+ WN L++ +
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAG-LPGSE 194
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
+A + R +PD T L+A A + G +H Y + G ++
Sbjct: 195 ALEAFVRMVDAGR----VRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVV 250
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
L+++YSKCG + A +F M D+V+++A+ISG ++NG ++E F + +G
Sbjct: 251 TGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWR 310
Query: 232 PDDQTFTGV-----------LSACSHC----------GLVDEGMMFL---------DRMS 261
P+ T V L+ C H LV + L R
Sbjct: 311 PNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSI 370
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQA---YQLITSMGVKPDSTIWRTLLGACRIHKHV 318
D + + + ++ + GL + A +QL+ + V+P+ + L AC +
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430
Query: 319 TLGERVIEHLIELKAQESGDYVL--LLNLYSSVGDWEKVKELREFMNEKGL 367
+LG + + +I + E YV+ L+++Y+ G + + + + M+ K +
Sbjct: 431 SLG-KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 116/288 (40%), Gaps = 62/288 (21%)
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
GY + + ++L +Y K A +VF +P D + W+ +++GL G +A+E+F
Sbjct: 144 GYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP----GSEALEAF 199
Query: 223 GAMQRAG-VFPDDQTF-----------------------------------TGVLSACSH 246
M AG V PD T TG++S S
Sbjct: 200 VRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSK 259
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDST 303
CG +D DRM P++ Y ++ G+++ + +L +T+ G +P+S+
Sbjct: 260 CGDMDSAQFLFDRMDN-----PDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSS 314
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELRE 360
++ H L + H +KA+ D ++ L LY + D E + + +
Sbjct: 315 TLVAVIPVYSPFGHELLARCL--HAFVVKARLDADALVSTALTTLYCRLNDMESARSIFD 372
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQ 408
M EK +++ + + + E V ++Q++ E+N Q
Sbjct: 373 AMLEKTMESWNAMISGYAQNGLTEMAV---------ALFQLMQELNVQ 411
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 293/503 (58%), Gaps = 10/503 (1%)
Query: 6 SMSSSP---EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQ 62
+++++P +E +MR+ + N + S + C L +HA +++ G
Sbjct: 147 ALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLD 203
Query: 63 LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
D + ++L+D Y +FDE+ D V WN +I+ + ++ A+ LF +
Sbjct: 204 SDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELF--M 261
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
+ESG + T VL+AC + LE G ++H ++ + Y + L N+L+ MY KCG
Sbjct: 262 RMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCG 319
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
L A +F M ++DV+SWS MISGLA NG +A++ F M+ G P++ T GVL
Sbjct: 320 CLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLF 379
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
ACSH GLV++G + M K FGI P H C+VDLLGRAG LD+A + I M +PDS
Sbjct: 380 ACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDS 439
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFM 362
IWRTLLGACR+HK+ TL +++L+ ++ G +LL N+Y+ + W ++ + M
Sbjct: 440 VIWRTLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTM 499
Query: 363 NEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSEL 422
++G++ PG S I L +VH F+ ++SHP + I Q L+ + ++ K GYV + L
Sbjct: 500 RDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVL 559
Query: 423 HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNRE 482
+LG E+K + L YHSEKLAIAFG + + G +R+ KNLRIC DCH FAK++S +
Sbjct: 560 QDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKA 619
Query: 483 VIIRDRLRFHHFREGRCSCNDYW 505
+IIRD +RFHHF+ G CSC DYW
Sbjct: 620 IIIRDPVRFHHFQHGVCSCGDYW 642
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S LF +M++ N + ++ C L G Q+HA VL+
Sbjct: 243 IIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK-- 300
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y D L L+D+Y +A LF + RD ++W+ +IS +N R+ +AL +FD
Sbjct: 301 YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFD 360
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
+ E G P+++T + VL AC+H G +E G R + + G + CN ++ +
Sbjct: 361 LMKAE--GPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLG 418
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+ G L A + M E D V W ++ M H + S+ A + + P+DQ
Sbjct: 419 RAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRM--HKNATLASYAATEILKLEPEDQGAR 476
Query: 239 GVLS 242
+LS
Sbjct: 477 ILLS 480
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARV------LRDGYQLDSQLMTTLMDLYSTFE 79
+ +P + IK C++ ++ G IH V + +L+ +Y+ F
Sbjct: 62 VRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFG 121
Query: 80 KSFEACKLFDEIPQRDTVAWNVLISCYIRNQ-RTRDALCLFDNLNREESGCKPDDVTCLL 138
+A +LF +PQR+ V+W +++ R ++AL + R+ G + T
Sbjct: 122 MLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRD--GVAANSYTFSS 179
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
VL AC G L +H I + G S + + +SLI Y K G L VF M D
Sbjct: 180 VLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCD 236
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+V W+++I+G A +G G A+E F M+ +G + T T VL AC+ +++ G
Sbjct: 237 LVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVG 291
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS------EHGYGSKM 168
AL L ++ +G + D V+ +++ C G + G IHR++S +
Sbjct: 50 ALALLPDI--AAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSL 107
Query: 169 NLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA-MNGHGRDAIESFGAMQR 227
+ NSL++MY+K G L A E+F GMP+++VVSW+ +++ LA G ++A+ M+R
Sbjct: 108 FVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRR 167
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
GV + TF+ VL AC G++ M D + G+ ++ ++D + G LD
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVL--AAMHADIIK--VGLDSDVFVRSSLIDAYMKLGDLD 223
Query: 288 QAYQLITSMGVKPDSTIWRTLLGA 311
+ M V D +W +++
Sbjct: 224 SGRGVFDEM-VTCDLVVWNSIIAG 246
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 289/506 (57%), Gaps = 6/506 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y S +E LF M + N F S +K C G Q+H + ++ G
Sbjct: 320 LISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLG 379
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+++Y+ A K F+ + +++ +++N N + D+ F+
Sbjct: 380 LSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA---NAKALDSDESFN 436
Query: 121 N-LNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + G P CLL AC +G + GE+IH I + G+G+ + + N+LI+MYS
Sbjct: 437 HEVEHTGVGASPFTYACLLSGAAC--IGTIVKGEQIHALIVKSGFGTNLCINNALISMYS 494
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG+ A +VF M ++V++W+++ISG A +G A+E F M GV P++ T+
Sbjct: 495 KCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIA 554
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VLSACSH GL+DE + M + I P + HY C+VDLLGR+GLL +A + I SM
Sbjct: 555 VLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFD 614
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D+ +WRT LG+CR+H++ LGE + ++E + + Y+LL NLY+S G W+ V LR
Sbjct: 615 ADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALR 674
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M +K L G S I + VH+F V D SHP+ +IY LDE+ ++K GY+
Sbjct: 675 KSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTD 734
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LH++ E+K L HSEK+A+A+ +++TP IRV KNLR+C DCH K +S V
Sbjct: 735 FVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVT 794
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHH ++G+CSCNDYW
Sbjct: 795 GREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 163/352 (46%), Gaps = 9/352 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS ++ LF ++ + F + + C++ G Q+H+ V+R G
Sbjct: 219 MITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSG 278
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D + TL+D+Y+ + K+F+ + + ++W LIS Y+++++ ++A+ LF
Sbjct: 279 LASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFC 338
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
N+ P+ T VL+ACA L G+++H + G + + NSLI MY++
Sbjct: 339 NM--LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYAR 396
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG-AMQRAGVFPDDQTFTG 239
G++ A + F + EK+++S++ N D+ ESF ++ GV T+
Sbjct: 397 SGTMECARKAFNILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVGASPFTYAC 453
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LS + G + +G + K G N+ ++ + + G + A Q+ MG +
Sbjct: 454 LLSGAACIGTIVKGEQIHALIVKS-GFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR 512
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG-DYVLLLNLYSSVG 350
+ W +++ H T + ++E+ + + Y+ +L+ S VG
Sbjct: 513 -NVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 6 SMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDS 65
SM S F + + I N + + ++ C GL I A +L+ GY DS
Sbjct: 121 SMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGY-FDS 179
Query: 66 QLMT--TLMDLYSTFEKSFEACKL-FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
+ L+D+++ ++ ++ FD++ ++ V W ++I+ Y + DA+ LF L
Sbjct: 180 HVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRL 239
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
E PD T +L AC L G+++H ++ G S + + +L+ MY+K
Sbjct: 240 LVSEY--TPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSA 297
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
++ + ++F M +V+SW+A+ISG + ++AI+ F M V P+ TF+ VL
Sbjct: 298 AVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLK 357
Query: 243 ACS 245
AC+
Sbjct: 358 ACA 360
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 137/290 (47%), Gaps = 12/290 (4%)
Query: 18 FEKMRQK-----RIPTNPF-ACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
FE +R+ T+P S +K C++ +L G +H +++ G LDS L+ +L
Sbjct: 21 FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80
Query: 72 MDLYSTFEKSFEACKLFDEI--PQRDTVAWNVLISCYIRNQ-RTRDALCLFDNLNREESG 128
+ LYS A +F + +RD V+W+ +ISC+ N +R L L +
Sbjct: 81 ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYSKCG-SLGM 186
P++ +L++C++ G I ++ + GY S + + +LI M++K G +
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQS 200
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF M K++V+W+ MI+ + G DA++ F + + PD T T +LSAC
Sbjct: 201 ARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVE 260
Query: 247 CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
G + + G+ ++ +VD+ ++ ++ + ++ +M
Sbjct: 261 LEFFSLGKQLHSWVIRS-GLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 50/232 (21%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM--P 195
L+L+AC G LE G+ +H + + G L NSLI +YSKCG A +F+ M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAM---QRAGVFPDDQTFTGVLSACSH------ 246
++D+VSWSA+IS A N A+ +F M R ++P++ FT +L +CS+
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 247 ---------------------CGLVD----------EGMMFLDRMSKDFGILPNIHHYGC 275
C L+D M D+M N+ +
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH-----KNLVTWTL 218
Query: 276 VVDLLGRAGLLDQAYQLITSMGVK---PDSTIWRTLLGACRIHKHVTLGERV 324
++ + GLLD A L + V PD +LL AC + +LG+++
Sbjct: 219 MITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQL 270
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 295/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ S + LF +M ++ + F S I C ++ Q+H L+
Sbjct: 129 MIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLA 188
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+S + T ++D+Y+ +AC +F+++P+R V W+ L + Y++N +AL LF
Sbjct: 189 LDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFR 248
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
RE G + + T +L ACA L G ++H I + G+ + SL+ +Y++
Sbjct: 249 CAQRE--GVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYAR 306
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A+ +F M K+VV W+AMI+ + + H +A+ F MQ+ G+FP++ T+ V
Sbjct: 307 CGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSV 366
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS CSH GLV++G + + D + PN+ HY C+VD+LGR+G D+A++L+ M +P
Sbjct: 367 LSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEP 426
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+++W +LLG+CR + ++ L E L +L+ G++VLL N+Y++ G+WE V R+
Sbjct: 427 TASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARK 486
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
++ + G + G S I KG VH FVV + HPRI +IY L+EI +++ I
Sbjct: 487 YLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIEC 546
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
+LH++ AE+K L +HSEKLA++FG+++ P I + KNLRIC DCH+F K+ + +
Sbjct: 547 DLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITE 606
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R VI+RD RFHHF++G CSC D+W
Sbjct: 607 RLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 7/299 (2%)
Query: 22 RQKRIPTNPF---ACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTF 78
R RI N A S ++ C K SL+ G H + G D+ L++LY+
Sbjct: 46 RLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKC 105
Query: 79 EKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLL 138
++ A +FD + R V+WN +I+ Y + AL LF ++RE G + T
Sbjct: 106 GRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHRE--GTHMSEFTLSS 163
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+ ACA A+ +++H + S + +++ +Y+KC + A VF+ MPE+
Sbjct: 164 TICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERT 223
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+V+WS++ +G NG +A+ F QR GV + T + +LSAC+ L EG+ L
Sbjct: 224 LVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQ-LH 282
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
+ G N +VD+ R G +++AY L M K + IW ++ + H H
Sbjct: 283 AVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHK-NVVIWNAMIASFSRHAH 340
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/507 (37%), Positives = 286/507 (56%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLR-D 59
M YS + E L+ M + FA S A+K C + + G IHA++++ D
Sbjct: 146 MAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHD 205
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + L+ LY E K+F+E+PQR+ V+WN LI+ + R + L F
Sbjct: 206 VGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAF 265
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ RE G +T +L CA + AL G++IH I + + + L NSL+ MY+
Sbjct: 266 RVMQREGMGFSW--ITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYA 323
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG +G +VF M KD+ SW+ M++G ++NG +A+ F M R G+ P+ TF
Sbjct: 324 KCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVA 383
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+LS CSH GL EG + +DFG+ P++ HY C+VD+LGR+G D+A + ++ ++
Sbjct: 384 LLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMR 443
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +IW +LL +CR++ +V L E V E L E++ G+YV+L N+Y++ G WE VK +R
Sbjct: 444 PSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVR 503
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQML-DEINKQLKIAGYVAEI 418
E M G++ GCS I +K +H FV S R + Y+ + +E++ +K GYV
Sbjct: 504 EMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNT 563
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
LH++ E K + HSE+LA F ++ T G IR+ KNLR+CVDCH++ K +S V
Sbjct: 564 GVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKV 623
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF G CSC DYW
Sbjct: 624 TRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 112 TRDALCLFDNLN---REESGCKPDDV-------TCLLVLQACAHLGALEFGEKIHRYI-- 159
T +LC + NL+ R KP + + L L AC +LE G K+H ++
Sbjct: 39 TLKSLCKWGNLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLHLLR 98
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK----GMPEKDVVSWSAMISGLAMNGHG 215
S++ L LI +YS CG + A VF+ PE+ V W AM G + NG
Sbjct: 99 SQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPV--WVAMAIGYSRNGFS 156
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+A+ + M V P + F+ L ACS
Sbjct: 157 HEALLLYRDMLSCCVKPGNFAFSMALKACS 186
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 297/506 (58%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y+ + +E LF++++ F + + +L G QIH++ +
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD 430
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+D+Y+ + EA ++F ++ + +V W +IS Y++ D L LF
Sbjct: 431 AISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFV 490
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R + G D T +++ACA L +L G+++H +I GY S + ++L+ MY+K
Sbjct: 491 EMQRAKIGA--DAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAK 548
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A ++F+ MP ++ VSW+A+IS A NG G + F M R+G+ PD + +
Sbjct: 549 CGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSI 608
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSHCGLV+EG+ + D M++ + ++P HY +D+L R G D+A +L+ M +P
Sbjct: 609 LCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEP 668
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKA-QESGDYVLLLNLYSSVGDWEKVKELR 359
D +W ++L +C IHK+ L ++ L +K +++ YV + N+Y++ G+W+ V +++
Sbjct: 669 DEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVK 728
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M E+G++ P S + +K H F +D +HP++ EI + LDE+ +++ GY + +
Sbjct: 729 KAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSS 788
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LHN+ E K +L YHSE++AIAF +++TP G+ I V KNLR C DCH KV+S +
Sbjct: 789 CALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIV 848
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHFR+G C+C DYW
Sbjct: 849 RREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 147/311 (47%), Gaps = 4/311 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ YS E LF KM++ F + + ++ + G Q+H V++
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCN 329
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+D YS ++ EA KLF E+P+ D +++NVL++CY N R +++L LF
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFK 389
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L + +G + +L A L+ G +IH S++ + NSL+ MY+K
Sbjct: 390 EL--QFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAK 447
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG G A +F + + V W+AMIS G D ++ F MQRA + D T+ +
Sbjct: 448 CGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+ AC+ + G + G + N+ +VD+ + G + A Q+ M V+
Sbjct: 508 VRACASLASLTLGKQLHSHIIGS-GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR- 565
Query: 301 DSTIWRTLLGA 311
+S W L+ A
Sbjct: 566 NSVSWNALISA 576
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM 68
++P+ ++ + + N + +F +K ++ L G AR L D +
Sbjct: 80 TAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNG-----ARKLFDEMPHKNIFS 134
Query: 69 TTLMDL-YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
T M + Y EA LFD + QR V W +LI Y +N + R+A LF + R
Sbjct: 135 TNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRH-- 192
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G PD V+ +L ++ ++H ++ + GY S + + NSL+ Y K SLG+A
Sbjct: 193 GIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLA 252
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
F++F +PE+D V+++A+++G + G R+AI F MQ G P + TF +L+A
Sbjct: 253 FQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 154/311 (49%), Gaps = 4/311 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ ++ E F LF +M + I + + + + +F S+ Q+H+ V++ G
Sbjct: 169 LIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLG 228
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y + +L+D Y A +LF++IP+RD+V +N L++ Y + R+A+ LF
Sbjct: 229 YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLF- 287
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+E G +P + T +L A L +EFG+++H ++ + + + + N+L+ YSK
Sbjct: 288 -FKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSK 346
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
+ A ++F MPE D +S++ +++ A NG ++++E F +Q G + F +
Sbjct: 347 HDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATL 406
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS + +D G + I I +VD+ + G +A ++ + + ++
Sbjct: 407 LSIAAISLNLDIGRQIHSQTIVTDAI-SEILVGNSLVDMYAKCGEFGEANRIFSDLAIQ- 464
Query: 301 DSTIWRTLLGA 311
S W ++ +
Sbjct: 465 SSVPWTAMISS 475
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N++I Y K G+L A +F M ++ V+W+ +I G A N R+A F M R G+
Sbjct: 136 NTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID 195
Query: 232 PDDQTFTGVLSACSHCGLVDE 252
PD + +LS + V+E
Sbjct: 196 PDHVSLATLLSGFTEFDSVNE 216
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 302/521 (57%), Gaps = 36/521 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS ++ E F+ M I + + C K L G +H V G
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 61 YQLDSQLMTTLMDLYST------FEKSFEA-----------------CK---------LF 88
L+ L+D+Y+ ++ F+A CK LF
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
DE+ RD + +N +++ YI + + R+AL LF ++ R + + D+ T + +L ACA LGA
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD--LRVDNFTVVNLLTACASLGA 387
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L+ G +H I + + + L +L+ MY KCG + A VF+ M ++DV +W+AMI+G
Sbjct: 388 LQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAG 447
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
LA NG G+ A+E F M+ G P+ ++ VL+ACSH L++EG ++ D M + I P
Sbjct: 448 LAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHP 507
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
I HYGC++DLLGR+GLLD+A L+ +M ++P++ IW ++L ACR+HKH+ L + EHL
Sbjct: 508 QIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHL 567
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L+ E G YV L N+Y WE ++R M E+ ++ T G S+I + G VH+FVV
Sbjct: 568 LKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVS 627
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELH-NLGAEEKGNALSYHSEKLAIAFGV 447
D SHPRI EI ML+EI+ +LK GY + +TS++ ++ EEK AL HSEKLAIAFG+
Sbjct: 628 DKSHPRILEIIAMLEEISHRLKSLGY-SPLTSQITVDVDEEEKEQALLAHSEKLAIAFGL 686
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
+ P + + KNLR+C DCH+ K++S ++NRE+I+RDR
Sbjct: 687 INLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDR 727
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 74/391 (18%)
Query: 9 SSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCM---KFCSLMGGLQIHARVLRDGYQLDS 65
S P F LF +MR+ + + F F KC + SL+ +HA LR +
Sbjct: 82 SDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAA 141
Query: 66 QLMT-TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS-------------------- 104
++ +L+ +Y + +A + FDEI +D VAW +LIS
Sbjct: 142 PFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPV 201
Query: 105 -----------CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGE 153
Y R R R+A+ F + G PD+VT + VL ACA L LE G
Sbjct: 202 RDVISWTSLIAAYSRANRAREAVGCFKTM--LSHGIAPDEVTVIAVLSACAKLKDLELGR 259
Query: 154 KIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG-------------------- 193
+H + E G + NL +LI MY+KCG G A +VF
Sbjct: 260 SLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKH 319
Query: 194 ------------MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVL 241
M +D++++++M++G +G R+A+ F +M+R + D+ T +L
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379
Query: 242 SACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPD 301
+AC+ G + +G + + + +I+ ++D+ + G +D+A + MG K D
Sbjct: 380 TACASLGALQQGRALHACIEQRL-VEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRD 437
Query: 302 STIWRTLLGACRIHKHVTLGERVIEHLIELK 332
W ++ + +G+ +EH +++
Sbjct: 438 VHTWTAMIAGLAFNG---MGKAALEHFYQMR 465
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 288/505 (57%), Gaps = 3/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ +Y+ + ++ L ++M I + FA + + SL G +H +R+G
Sbjct: 583 MITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNG 642
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + LM++Y EA +FD + +D ++WN LI Y RN ++ LF
Sbjct: 643 MEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFS 702
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ + KP+ VT +L A A + +LE G +IH Y G+ N+L+ MY K
Sbjct: 703 DMLLQ---FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVK 759
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG+L +A +F + +K+++SW+ MI+G M+G G+DA+ F M+ +GV PD +F+ +
Sbjct: 760 CGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAI 819
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC H GL EG F + M K++ I P + HY C+VDLL G L +A++ I SM ++P
Sbjct: 820 LYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEP 879
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
DS+IW +LL CRIH+ V L E+V + + +L+ + +G YVLL N+Y+ WE VK+L+
Sbjct: 880 DSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKN 939
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ +GL+ GCS I ++G VH F+ D+ +HP N I + LD + ++++ G+ +
Sbjct: 940 KIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKY 999
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
L AL HS KLA+ FGVL P G IRV KN ++C CH AK +S + N
Sbjct: 1000 SLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCN 1059
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF GRCSC ++
Sbjct: 1060 REIILRDSSRFHHFEGGRCSCRGHF 1084
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 200/479 (41%), Gaps = 75/479 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + +EG LF +M+ + + A S +KC S+ G IH + + G
Sbjct: 169 LMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLG 228
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ L+ LYS +A ++FD + RD ++WN IS Y N A+ LF
Sbjct: 229 LGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFS 288
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY---------GSKMNLC 171
+ E G + VT L VL ACA LG G+ +H Y + G G L
Sbjct: 289 KMWSE--GTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALG 346
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+ L+ MY KCG +G A VF MP K +V W+ ++ G A +++ F M G+
Sbjct: 347 SKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGI 406
Query: 231 FPDDQTFTGVLS-----ACSHCGLV------------------------------DEGMM 255
PD+ + +L +C+ GLV D ++
Sbjct: 407 TPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVL 466
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGAC 312
DRM I N GC + GL +A +L M G + DST ++L AC
Sbjct: 467 VFDRMPHQDTISWNSVISGCTSN-----GLNSEAIELFVRMWMQGHELDSTTLLSVLPAC 521
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQT 369
H RV+ H +K G+ L LL++YS+ DW ++ M +K + +
Sbjct: 522 -ARSHYWFVGRVV-HGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS 579
Query: 370 TPGCST----IGL----KGVVHEFVVDDVSHPRINEIYQML-----DEINKQLK-IAGY 414
T GL G++ E V+D + P + + +L DE KQ K + GY
Sbjct: 580 WTAMITSYTRAGLFDKVAGLLQEMVLDGIK-PDVFAVTSVLHGFAGDESLKQGKSVHGY 637
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 14/235 (5%)
Query: 87 LFDEIPQR--DTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
+FDE+P R D W L+S Y + ++ + LF + + G PD VL+ A
Sbjct: 152 VFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQM--QCCGVSPDAHAVSCVLKCIA 209
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
LG++ GE IH + + G G + N+LIA+YS+CG + A +VF M +D +SW++
Sbjct: 210 SLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNS 269
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
ISG NG A++ F M G T VL AC+ G G + + S
Sbjct: 270 TISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKV-VHGYSMKS 328
Query: 265 GILPNIHHYGCVVD---------LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
G+L ++ +D + + G + A ++ +M K + +W ++G
Sbjct: 329 GLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMG 383
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMN--LCNSLIAMYSKCGSLGMAFEVFKGMPE 196
V+Q C +LE + H + G G + L L+ Y KCG LG A VF MP
Sbjct: 100 VVQLCGEERSLEAARRAHALVRA-GTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPP 158
Query: 197 K--DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
+ DV W++++S A G ++ + F MQ GV PD + VL + G + EG
Sbjct: 159 RVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGE 218
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + K G+ ++ L R G ++ A Q+ SM + D+ W + +
Sbjct: 219 VIHGLLEK-LGLGEACAVANALIALYSRCGCMEDAMQVFDSMHAR-DAISWNSTI 271
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 280/481 (58%), Gaps = 4/481 (0%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
+P AC+F C L G Q H V++ G+++D ++ +++D Y + +A
Sbjct: 217 LPNVVSACAF-FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKAR 275
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+FD + R++V+W +++ Y +N +A + L SG +P D L CA
Sbjct: 276 AVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY--LGARRSGEEPTDFMVSSALTTCAG 333
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L L G +H + + + ++L+ MY KCG + A ++F P++++V+W+AM
Sbjct: 334 LLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAM 393
Query: 206 ISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
I G A G ++A+ F M R+G P+ T V+++CS GL +G + M + F
Sbjct: 394 IGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERF 453
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
GI P HY CVVDLLGRAG+ +QAY++I M ++P ++W LLGAC++H LG
Sbjct: 454 GIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIA 513
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
E L EL Q+SG++VLL N+++S G W + ++R+ M G++ PGCS + K VVH
Sbjct: 514 AEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHV 573
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F D H NEI +L ++ KQ++ AGY+ + L++L EEK + + HSEKLA+A
Sbjct: 574 FRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALA 633
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG++ PPG IR+ KNLRICVDCH K +SG+ RE+I+RD RFHHF++ +CSC DY
Sbjct: 634 FGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDY 693
Query: 505 W 505
W
Sbjct: 694 W 694
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 17/325 (5%)
Query: 49 GLQIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G QIH+ +R GY +D + +D+Y + A LF E+P R+ VAWN +++ +
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ R + + + L E+G P+ V+ ACA L GE+ H ++ + G+
Sbjct: 197 LDGRPLETIEAYFGL--REAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMD 254
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+++ NS++ Y KC G A VF GM ++ VSW +M++ A NG +A ++ +R
Sbjct: 255 VSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARR 314
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+G P D + L+ C+ GL+ + L ++ I NI +VD+ G+ G +
Sbjct: 315 SGEEPTDFMVSSALTTCA--GLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCV 372
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER---VIEHLIELKAQESGDYVLLL 343
+ A Q+ + + W ++G + H+ + V + +I + + +Y+ L+
Sbjct: 373 EDAEQIFYETPQR-NLVTWNAMIGG---YAHIGDAQNALLVFDDMIR-SGETAPNYITLV 427
Query: 344 NLYSSVGDWEKVK---ELREFMNEK 365
N+ +S K EL E M E+
Sbjct: 428 NVITSCSRGGLTKDGYELFETMRER 452
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV AY+ + + EE F + R+ F S A+ C L G +HA +R
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+D+Y +A ++F E PQR+ V WN +I Y ++AL +FD
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
++ R P+ +T + V+ +C+ G + G ++ + E G + ++ +
Sbjct: 412 DMIRSGE-TAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 470
Query: 180 KCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGH---GRDAIESF 222
+ G A+EV +GMP + +S W A++ M+G GR A E
Sbjct: 471 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKL 517
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+C L+ +YSK A P VVS++A ISG A +G A+ +F M R G
Sbjct: 53 ICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLG 112
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC-VVDLLGRAGLLDQ 288
+ P+D TF A + + ++ FG LP C +D+ + G L
Sbjct: 113 LRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKL 172
Query: 289 AYQLITSM 296
A L M
Sbjct: 173 ARHLFGEM 180
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 293/538 (54%), Gaps = 35/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT-----NPFA----CSFAIKCC----------- 40
++ Y+ SPE +F +M+QK + T FA C A++
Sbjct: 152 LITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPN 211
Query: 41 -MKFCSLMGGL----------QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF--EACKL 87
+ F SL+ G +IH + G + + L+++Y E A +
Sbjct: 212 RVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVI 271
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
E+ ++ AWNVLI+ Y + R+R+AL + L E D VT + VL AC
Sbjct: 272 LQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLE--AIPVDKVTFISVLNACTSST 329
Query: 148 ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMIS 207
+L G+ IH E G S + + N+L MYSKCGS+ A +F MP + VSW+ M+
Sbjct: 330 SLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQ 389
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGIL 267
A +G + ++ M++ GV + TF VLS+CSH GL+ EG + + D GI
Sbjct: 390 AYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 449
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEH 327
HYGC+VDLLGRAG L +A + I+ M +P+ W +LLGACR+HK + G+
Sbjct: 450 VKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARK 509
Query: 328 LIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVV 387
L+EL S V+L N+YS GDW+ +LR M + ++ PG S+I +K VHEF V
Sbjct: 510 LLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRV 569
Query: 388 DDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGV 447
D SHPR EIY ++E+ ++ AGYV + LH++ E+K + L+YHSEKLAIAFG+
Sbjct: 570 RDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGL 629
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++TP +++ + KNLR+C DCH K +S + RE+++RD RFHHFR+G CSC DYW
Sbjct: 630 ISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 157/317 (49%), Gaps = 6/317 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS+S E F++F++M+ + + + C+ +L G + +
Sbjct: 82 MISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETS 141
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++LD + T L+ +Y+ A ++F + Q++ + W+ +I+ + + +AL F
Sbjct: 142 FELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFR 201
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G P+ VT + +L LE +IH I+EHG + N+L+ +Y +
Sbjct: 202 MMQQE--GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGR 259
Query: 181 C--GSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
C G L +A + + M E+ + +W+ +I+G ++G R+A+E++ +Q + D TF
Sbjct: 260 CETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFI 319
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL+AC+ + EG M + + + G+ ++ + ++ + G ++ A ++ SM +
Sbjct: 320 SVLNACTSSTSLAEGKM-IHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI 378
Query: 299 KPDSTIWRTLLGACRIH 315
+ + W +L A H
Sbjct: 379 R-SAVSWNGMLQAYAQH 394
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 139/273 (50%), Gaps = 6/273 (2%)
Query: 45 SLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLIS 104
+L G IH+ V + LD + T L++ Y+ +A K+FD +P R WN +IS
Sbjct: 25 ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 84
Query: 105 CYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGY 164
Y ++R+ +A +F + E C D VT L +L AC + L+ G+ + ISE +
Sbjct: 85 AYSISERSGEAFFIFQRMQHEGERC--DRVTFLSILDACVNPENLQHGKHVRESISETSF 142
Query: 165 GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGA 224
+ + +LI MY++C S A +VF M +K++++WSA+I+ A +GH +A+ F
Sbjct: 143 ELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRM 202
Query: 225 MQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-- 282
MQ+ G+ P+ TF +L+ + ++E + + + + G+ +V++ GR
Sbjct: 203 MQQEGILPNRVTFISLLNGFTTPSGLEE-LSRIHLLITEHGLDDTTTMSNALVNVYGRCE 261
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
G LD A ++ M + T W L+ +H
Sbjct: 262 TGELDVAEVILQEMD-EQQITAWNVLINGYTLH 293
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 13/253 (5%)
Query: 128 GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
G K + +T L VL + AL G+ IH + E + + + +L+ Y+KCGSL A
Sbjct: 5 GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64
Query: 188 FEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
+VF GMP + V +W++MIS +++ +A F MQ G D TF +L AC +
Sbjct: 65 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
+ G + +S+ L ++ ++ + R + A Q+ M K + W
Sbjct: 125 ENLQHGKHVRESISETSFEL-DLFVGTALITMYARCRSPENAAQVFGRMKQK-NLITWSA 182
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWEKVKELREF 361
++ A H H R + Q+ G ++ LLN +++ E++ +
Sbjct: 183 IITAFADHGHCGEALRYFRMM-----QQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 237
Query: 362 MNEKGLQTTPGCS 374
+ E GL T S
Sbjct: 238 ITEHGLDDTTTMS 250
>gi|387169573|gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
Length = 598
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 260/422 (61%), Gaps = 4/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+ ++ + WN++I Y+RN + +AL N+ S KP+ + L AC
Sbjct: 181 AKKVLRRASDQNVITWNLMIGGYVRNVQYEEALKTLKNM-LSFSDIKPNKFSFASALAAC 239
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG L + +H + + G L ++L+ +Y+KCG + + EVF + DV W+
Sbjct: 240 ARLGDLHHAKWVHSLMIDAGIELNTILSSALVDVYAKCGDIETSREVFYSVKWNDVSIWN 299
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI+G A +G +AI F M+ V PD TF G+L+ACSHCGL++EG F MS+
Sbjct: 300 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGILTACSHCGLLEEGKEFFGLMSQR 359
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
F I P + HYG +VDLLGRAG + +AY LI SM ++PD IWR+LL + R +K+ LGE
Sbjct: 360 FSIQPKLEHYGAMVDLLGRAGQVKEAYDLIESMPIEPDVVIWRSLLSSARTYKNPELGEI 419
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
I++L + K SGDYVLL N+YSS WE +++RE M ++G++ G S + GV+H
Sbjct: 420 AIQNLSKAK---SGDYVLLSNIYSSTKKWENAQKVRELMTKEGIRKAKGKSWVEFGGVIH 476
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
F D SH IY++L+ + ++ K G+V++ L ++ EEK L+YHSEKLA+
Sbjct: 477 RFKAGDTSHIDTKAIYKVLEGLIQKAKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 536
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+ +L + PG+ IR+ KN+R+C DCHN+ K +S + NR +I+RDR+RFH F +G CSC D
Sbjct: 537 AYVILKSSPGSEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCKD 596
Query: 504 YW 505
YW
Sbjct: 597 YW 598
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + EE + M I N F+ + A+ C + L +H+ ++
Sbjct: 199 MIGGYVRNVQYEEALKTLKNMLSFSDIKPNKFSFASALAACARLGDLHHAKWVHSLMIDA 258
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +L++ L + L+D+Y+ + ++F + D WN +I+ + + +A+ +F
Sbjct: 259 GIELNTILSSALVDVYAKCGDIETSREVFYSVKWNDVSIWNAMITGFATHGLATEAIRVF 318
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMY 178
+ E PD +T L +L AC+H G LE G++ +S+ K+ +++ +
Sbjct: 319 SEMEAEH--VSPDSITFLGILTACSHCGLLEEGKEFFGLMSQRFSIQPKLEHYGAMVDLL 376
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + A+++ + MP E DVV W +++S
Sbjct: 377 GRAGQVKEAYDLIESMPIEPDVVIWRSLLSS 407
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGV 230
N +I K G G+A +V + +++V++W+ MI G N +A+++ M + +
Sbjct: 166 NIIIESLMKTGEYGLAKKVLRRASDQNVITWNLMIGGYVRNVQYEEALKTLKNMLSFSDI 225
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P+ +F L+AC+ G + ++ + D GI N +VD+ + G ++ +
Sbjct: 226 KPNKFSFASALAACARLGDLHHA-KWVHSLMIDAGIELNTILSSALVDVYAKCGDIETSR 284
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL-IELKAQESGDYVLLLNLYSSV 349
++ S+ D +IW ++ H T RV + E + +S ++ +L S
Sbjct: 285 EVFYSVKWN-DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGILTACSHC 343
Query: 350 GDWEKVKELREFMNEK 365
G E+ KE M+++
Sbjct: 344 GLLEEGKEFFGLMSQR 359
>gi|357137130|ref|XP_003570154.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Brachypodium distachyon]
Length = 622
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/512 (36%), Positives = 289/512 (56%), Gaps = 10/512 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R + P L+ M ++ + + + F +K C + + G Q+H V + G
Sbjct: 114 LMRGHVAHDDPAAALRLYAAMLEQGVEPDRYTFPFVLKACARLAASGQGRQLHGHVAKLG 173
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISC---YIRNQRTRDAL 116
+ Q D + +L+ Y + A + F+++ ++ + Y R D L
Sbjct: 174 FSQHDEHVGNSLISFYGRCGEPELARRAFEQMEAEESTTAASWSALLAAYTRAGLWADCL 233
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
F + R +G +P++ + + L ACAHLGA + G IH + + + SL+
Sbjct: 234 DSFGAMAR--AGGRPEESSMVSALSACAHLGAYDVGRSIHCALLRNTVALNTFMETSLVD 291
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCG + A VF M K+ ++SAM+SGLA++G G A++ F AM R G PD+
Sbjct: 292 MYAKCGCIDKASAVFDAMDGKNEWTYSAMVSGLALHGDGLKALQVFDAMAREGHKPDEAV 351
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
+ G+L+ACS GL++EG+ DRM + + PN HYGC+VDL+ RAG LD A LI SM
Sbjct: 352 YVGILNACSRSGLLEEGLRCFDRMRLEHKVAPNAQHYGCMVDLMARAGRLDDARALIGSM 411
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
P WR+LL ACRIH +V L ER ++ L + A +GDYV+L ++++ +W+
Sbjct: 412 PTGPTDAAWRSLLNACRIHGNVELAERALQGLSGIGAVNAGDYVILADMHARTKNWDAAA 471
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
LR +GL PG S + + G H F D SHPR EIY+ML ++ QL+ GY
Sbjct: 472 ALRTEAANRGLAQAPGFSAVEVHGRAHRFASQDRSHPRTAEIYEMLHQMEWQLRFEGYEP 531
Query: 417 EITSEL---HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
+ TSE+ + G EEK A++ HS+KLA+AFG+L+TP GT +RV NLR+ +CH ++
Sbjct: 532 D-TSEVALTRDAGEEEKRRAVAAHSQKLAMAFGLLSTPEGTPVRVVTNLRMSKECHAYSA 590
Query: 474 VLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++S ++ REV++RDR RFH FR G CSC +YW
Sbjct: 591 LISEIFGREVVVRDRNRFHRFRRGACSCRNYW 622
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
A+ S G + A +F + E + ++ ++ G + A+ + AM GV PD
Sbjct: 85 ALGSWPGGMEYAAAIFAALDEPEAFDYNTLMRGHVAHDDPAAALRLYAAMLEQGVEPDRY 144
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYG-CVVDLLGRAGLLDQAYQLIT 294
TF VL AC+ +G ++K G + H G ++ GR G + A +
Sbjct: 145 TFPFVLKACARLAASGQGRQLHGHVAK-LGFSQHDEHVGNSLISFYGRCGEPELARRAFE 203
Query: 295 SMGVKPDST 303
M + +T
Sbjct: 204 QMEAEESTT 212
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 280/481 (58%), Gaps = 4/481 (0%)
Query: 26 IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
+P AC+F C L G Q H V++ G+++D ++ +++D Y + +A
Sbjct: 110 LPNVVSACAF-FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKAR 168
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+FD + R++V+W +++ Y +N +A + L SG +P D L CA
Sbjct: 169 AVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY--LGARRSGEEPTDFMVSSALTTCAG 226
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
L L G +H + + + ++L+ MY KCG + A ++F P++++V+W+AM
Sbjct: 227 LLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAM 286
Query: 206 ISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
I G A G ++A+ F M R+G P+ T V+++CS GL +G + M + F
Sbjct: 287 IGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERF 346
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
GI P HY CVVDLLGRAG+ +QAY++I M ++P ++W LLGAC++H LG
Sbjct: 347 GIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIA 406
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHE 384
E L EL Q+SG++VLL N+++S G W + ++R+ M G++ PGCS + K VVH
Sbjct: 407 AEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHV 466
Query: 385 FVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIA 444
F D H NEI +L ++ KQ++ AGY+ + L++L EEK + + HSEKLA+A
Sbjct: 467 FRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALA 526
Query: 445 FGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDY 504
FG++ PPG IR+ KNLRICVDCH K +SG+ RE+I+RD RFHHF++ +CSC DY
Sbjct: 527 FGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDY 586
Query: 505 W 505
W
Sbjct: 587 W 587
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 17/325 (5%)
Query: 49 GLQIHARVLRDGY-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G QIH+ +R GY +D + +D+Y + A LF E+P R+ VAWN +++ +
Sbjct: 30 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 89
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+ R + + + L E+G P+ V+ ACA L GE+ H ++ + G+
Sbjct: 90 LDGRPLETIEAYFGL--REAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMD 147
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+++ NS++ Y KC G A VF GM ++ VSW +M++ A NG +A ++ +R
Sbjct: 148 VSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARR 207
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGM-MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+G P D + L+ C+ GL+ + L ++ I NI +VD+ G+ G +
Sbjct: 208 SGEEPTDFMVSSALTTCA--GLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCV 265
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER---VIEHLIELKAQESGDYVLLL 343
+ A Q+ + + W ++G + H+ + V + +I + + +Y+ L+
Sbjct: 266 EDAEQIFYETPQR-NLVTWNAMIGG---YAHIGDAQNALLVFDDMIR-SGETAPNYITLV 320
Query: 344 NLYSSVGDWEKVK---ELREFMNEK 365
N+ +S K EL E M E+
Sbjct: 321 NVITSCSRGGLTKDGYELFETMRER 345
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV AY+ + + EE F + R+ F S A+ C L G +HA +R
Sbjct: 185 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 244
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+D+Y +A ++F E PQR+ V WN +I Y ++AL +FD
Sbjct: 245 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 304
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
++ R P+ +T + V+ +C+ G + G ++ + E G + ++ +
Sbjct: 305 DMIRSGE-TAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 363
Query: 180 KCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGH---GRDAIESF 222
+ G A+EV +GMP + +S W A++ M+G GR A E
Sbjct: 364 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKL 410
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 303/542 (55%), Gaps = 39/542 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ---KRIPTNPFACSFAIKC------------CMKFCS 45
++R ++ P E F +F +R+ + +P PFA S K
Sbjct: 114 LLRFAHLTQPPLETFRVFSGLRRAHGRDLPFLPFAFSPLAKSAAAARSLPAAAGAHAVSL 173
Query: 46 LMGGLQIHA--------------------RVLRDGYQLDSQLMTTLMDLYSTFEKSFEAC 85
L+GG H +VL + D T+++ YS A
Sbjct: 174 LLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEMVVKDVISWTSIVAAYSRSRDMGSAE 233
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F P +D VAW +++ Y +N AL F+ + +G D+V+ + ACA
Sbjct: 234 EVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQM--AGAGMPIDEVSLTGAISACAQ 291
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
LGA+ I G G + + + L+ MY+KCG + A VF+GM EK+V ++S+M
Sbjct: 292 LGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSM 351
Query: 206 ISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDF 264
I GLA +G DAI F M +RA V P+ TF GVL+ACSH G+V EG + +M +
Sbjct: 352 IVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRY 411
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERV 324
GILP+ HY C+VDLLGRAGL+ +A L+ SM V+P +W LLGACRIH + + +
Sbjct: 412 GILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKVA 471
Query: 325 IEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTI-GLKGVVH 383
+HL +L+ + G+YVLL N +S G+W++V ++R+ M +GL+ P S+ G G+VH
Sbjct: 472 AQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRIRGLKKDPAVSSFEGRDGLVH 531
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
+F D +HP ++EI + L E+ +LK+AGYV ++S ++N+ EEK L HSEKLA+
Sbjct: 532 QFFAGDNTHPWMHEIKKTLLELRARLKLAGYVPVLSSVVYNVSDEEKERLLMGHSEKLAL 591
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
+FG+L ++IR+ KNLRIC DCH F +++S V E+I+RD +RFHHFR+G CSC
Sbjct: 592 SFGLLTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEIIVRDNMRFHHFRDGECSCGG 651
Query: 504 YW 505
+W
Sbjct: 652 FW 653
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 286/505 (56%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ S E+ F +F +M + + N F+ S ++ C L G QIH ++ G
Sbjct: 321 LISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLG 380
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + LMD+Y+ + ++F + + V+WN +I Y ++ DAL +F
Sbjct: 381 YESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFH 440
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + VT VL+ACA+ +++ +IH I + + + +CNSLI Y+K
Sbjct: 441 EM--RAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAK 498
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +VF+ + E DVVSW+++IS A++G +A+E F M ++ + +D TF +
Sbjct: 499 CGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSL 558
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS C GLV++G+ + M D I P++ HY C+V LLGRAG L A + I + P
Sbjct: 559 LSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTP 618
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+WR LL +C +HK+V LG E +++++ + YVLL N+Y++ G ++V R+
Sbjct: 619 SPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRK 678
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M G++ G S + +KG VH F V HP + I ML+ +N + GYV +I
Sbjct: 679 SMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINV 738
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ EEK L HSE+LA+A+G+ TPPG IR+ KNLR C+DCH KV+S +
Sbjct: 739 VLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQ 798
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFHHF EG CSC DYW
Sbjct: 799 REIIVRDINRFHHFEEGICSCGDYW 823
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+++ Y++ EE LF +++++ N F + +K + + IHA + G
Sbjct: 119 LMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLG 178
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ + T L+D YS A +FD I +D V W ++SCY N AL F
Sbjct: 179 HDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFS 238
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +G KP+ L+A L + G+ IH + Y ++ ++ +L+ MY+K
Sbjct: 239 KMRM--TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAK 296
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A +F+ +P DV+ WS +IS A + A E F M R+ V P++ + +GV
Sbjct: 297 CGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGV 356
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC++ ++ G + ++ G + ++D+ + ++ + ++ +S+
Sbjct: 357 LQACANIAFLELGEQ-IHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ-DA 414
Query: 301 DSTIWRTLL-GACR 313
+ W T++ G C+
Sbjct: 415 NEVSWNTIIVGYCQ 428
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 11/300 (3%)
Query: 16 YLFEKMRQKRIPT-NPFACSFAIKCCMKFCSLMGGLQIHARVLRDG--YQLDSQLMTTLM 72
+L +++ +P + +AC+ ++ C+ G +HARV++ G QLD+ L+
Sbjct: 30 WLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLL 89
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+ Y+ A +LFD +P+R+ V++ L+ Y +AL LF L RE G + +
Sbjct: 90 NFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQRE--GHEVN 147
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+L+ + A IH + G+ + +LI YS CG++ A VF
Sbjct: 148 HFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFD 207
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA--CSHCGLV 250
G+ KD V+W+AM+S + N A+ +F M+ G P+ T L A C L+
Sbjct: 208 GIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALL 267
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+G+ + + P H G ++D+ + G ++ A+ I M D +W L+
Sbjct: 268 GKGIHGCS-VKTLYDTEP--HVGGALLDMYAKCGDIEDAHA-IFEMIPHDDVILWSFLIS 323
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
RN +AL D+ + K D C LQ C G G +H + + G ++
Sbjct: 20 RNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQ 79
Query: 168 MNL--CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
++ N L+ Y+K G L A +F GMPE++ VS+ ++ G A+ G +A+E F +
Sbjct: 80 LDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRL 139
Query: 226 QRAG 229
QR G
Sbjct: 140 QREG 143
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/505 (35%), Positives = 296/505 (58%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + E +F +MR + + F S + C C + ++H ++
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
L+ + T L+DLY+ +A ++F+ + + +V W+ +++ Y++N+ +AL L+
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
R + + T V+ AC++L AL G+++H I + G+GS + + +S + MY+K
Sbjct: 253 RAQR--MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGSL ++ +F + EK++ W+ +ISG A + ++ + F MQ+ G+ P++ TF+ +
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS C H GLV+EG F M +G+ PN+ HY C+VD+LGRAGLL +AY+LI S+ P
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++IW +LL +CR++K++ L E E L EL+ + +G++VLL N+Y++ WE++ + R+
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ + ++ G S I +K VH F V + HPRI EI LD + + + GY +
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEH 550
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
ELH++ +K L HSEKLA+ FG++ P + +R+ KNLRICVDCH F K S
Sbjct: 551 ELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATR 610
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFHHF +G CSC D+W
Sbjct: 611 RFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 180/375 (48%), Gaps = 22/375 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C + ++M H +++R + D L+ L++ YS A ++FD + +R
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC-AHLGALEFGEKI 155
V+WN +I Y RN+ +AL +F + E G K + T VL AC + ALE +K+
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNE--GFKFSEFTISSVLSACGVNCDALE-CKKL 184
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + + +L+ +Y+KCG + A +VF+ M +K V+WS+M++G N +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
+A+ + QR + + T + V+ ACS+ + EG + K G N+
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASS 303
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
VD+ + G L ++Y + + + K + +W T++ KH E +I L E K Q+
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISG--FAKHARPKEVMI--LFE-KMQQ 357
Query: 336 SG---DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV-- 390
G + V +L S G V+E R F K ++TT G S VVH + D+
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFF--KLMRTTYGLSP----NVVHYSCMVDILG 411
Query: 391 SHPRINEIYQMLDEI 405
++E Y+++ I
Sbjct: 412 RAGLLSEAYELIKSI 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+LQ CA GA+ + H I + L N LI YSKCG + +A +VF GM E+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-HCGLVDEGMMFL 257
+VSW+ MI N +A++ F M+ G + T + VLSAC +C ++ L
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE--CKKL 184
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
+S I N++ ++DL + G++ A Q+ SM K S W +++
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVA 236
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 292/499 (58%), Gaps = 8/499 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M ++ + + F + + L+GG+Q H +++ G+ +S + + L+
Sbjct: 226 EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLI 285
Query: 73 DLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCYIRNQR-TRDALCLFDNLNREESGCK 130
DLYS C K+F+EI D V WN +IS + + + + D + F + + +G
Sbjct: 286 DLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREM--QHNGFH 343
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
PDD + + V AC++L + G+++H I +++++ N+L+AMYSKCG++ A
Sbjct: 344 PDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARR 403
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF MPE ++VS ++MI+G A +G +++ F M + + P+ TF VLSAC H G
Sbjct: 404 VFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGK 463
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
V+EG + + M + F I P HY C++DLLGRAG L +A ++I +M P S W TLL
Sbjct: 464 VEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
GACR H +V L + ++L+ + YV+L N+Y+S WE+ ++ M E+G++
Sbjct: 524 GACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKK 583
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSEL---HNLG 426
PGCS I + VH FV +D SHP I EI+ + EI +++K AGYV +I L +
Sbjct: 584 KPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVE 643
Query: 427 AEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIR 486
+EK L YHSEKLA+AFG+++T I V KNLRIC DCHN K++S + RE+ +R
Sbjct: 644 PDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVR 703
Query: 487 DRLRFHHFREGRCSCNDYW 505
D RFH F+EG CSC DYW
Sbjct: 704 DTHRFHCFKEGHCSCGDYW 722
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 10/245 (4%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
TL++ Y+ A ++FDEIPQ D V++N LI+ Y R AL LF + G
Sbjct: 79 NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
D T V+ AC L ++H ++ GY ++ N+++A YS+ G L A
Sbjct: 139 L--DGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEAR 194
Query: 189 EVFKGMPE---KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
VF+ M E +D VSW+AMI + G +A+E F M R G+ D T VL+A +
Sbjct: 195 RVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFT 254
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR-AGLLDQAYQLITSMGVKPDSTI 304
+ GM F M K G N H ++DL + AG + + ++ + PD +
Sbjct: 255 CVKDLVGGMQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA-PDLVL 312
Query: 305 WRTLL 309
W T++
Sbjct: 313 WNTMI 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSF--AIKCCMKFCSLMGGLQIHARVLRDGYQLDS-QLM 68
E+G + F +M+ +P CSF C S G Q+HA ++ + +
Sbjct: 328 EDGIWCFREMQHNGF--HPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVN 385
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+ +YS +A ++FD +P+ + V+ N +I+ Y ++ ++L LF+ + +++
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIA 445
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYSKCGSLGMA 187
P+ +T + VL AC H G +E G+K + E + + +I + + G L A
Sbjct: 446 --PNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEA 503
Query: 188 FEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIES 221
+ + MP + W+ ++ +G+ A+++
Sbjct: 504 ERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N+LI Y+K + +A +VF +P+ D+VS++ +I+ A G R A+ F ++
Sbjct: 79 NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138
Query: 232 PDDQTFTGVLSAC-SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D T +GV+ AC GLV + F+ D N V+ R G L++A
Sbjct: 139 LDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVN----NAVLACYSRKGFLNEAR 194
Query: 291 QLITSMGV--KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSS 348
++ MG D W ++ AC H+ G +E E+ + G V + + S
Sbjct: 195 RVFREMGEGGGRDEVSWNAMIVACGQHRE---GLEAVELFREMVRR--GLKVDMFTMASV 249
Query: 349 VGDWEKVKELREFMNEKGLQTTPG 372
+ + VK+L M G+ G
Sbjct: 250 LTAFTCVKDLVGGMQFHGMMIKSG 273
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/498 (38%), Positives = 286/498 (57%), Gaps = 7/498 (1%)
Query: 11 PEEGFYLFEKMRQKR-IPTNPFACSFAIKCC-MKFCSLMGGLQIHARVLRDGYQLDSQLM 68
P E F + +R+ +P C+F C F SL G Q H V+ G+ +D +
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSL--GEQFHGFVVTCGFDMDVSVS 253
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
++D Y + +A +FD + R++V+W +I Y ++ DAL ++ + +G
Sbjct: 254 NAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVY--MGARNTG 311
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+P D VL CA L L FG +H + + + ++L+ MY KCG + A
Sbjct: 312 EEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAE 371
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG-VFPDDQTFTGVLSACSHC 247
+VF MPE+++V+W+AMI G A G ++A+ F AM R+G P+ T V++ACS
Sbjct: 372 QVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRG 431
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GL +G D M + FG+ P HY CVVDLLGRAG+ ++AY++I M ++P ++W
Sbjct: 432 GLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGA 491
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LLGAC++H LG E L EL Q+SG++VLL N+ +S G W + ++R+ M G+
Sbjct: 492 LLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGI 551
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ PGCS I K VVH F D H R +EI +L ++ KQ++ +GY+ + L+++
Sbjct: 552 KKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEE 611
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
EEK + HSEKLA+AFG++ PP IR+ KNLRICVDCH K +SG+ RE+I+RD
Sbjct: 612 EEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRD 671
Query: 488 RLRFHHFREGRCSCNDYW 505
RFH+F++ CSC DYW
Sbjct: 672 NNRFHYFKQFECSCKDYW 689
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ + E+ ++ R F S + C L G +HA +R
Sbjct: 287 MIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSC 346
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+D+Y +A ++F ++P+R+ V WN +I Y ++AL +FD
Sbjct: 347 IDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFD 406
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMYS 179
+ R G P+ +T + V+ AC+ G + G ++ + E G + ++ +
Sbjct: 407 AMIR-SGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLG 465
Query: 180 KCGSLGMAFEVFKGMPEKDVVS-WSAMISGLAMNGH---GRDAIE 220
+ G A+E+ + MP + +S W A++ M+G GR A E
Sbjct: 466 RAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASE 510
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 22/278 (7%)
Query: 49 GLQIHARVLRD-GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G HAR LR L + L++LYS + A P V++ IS
Sbjct: 28 GRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAA 87
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA--CAHLGALEFGEKIHRYISEHGY- 164
++ R AL F + R G +P+D T +A CA G +IH GY
Sbjct: 88 QHARPLAALSAFAAMLR--VGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYL 145
Query: 165 -GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFG 223
G C ++ MY K G LG+A +F+ MP ++V++W+A+++ ++G + +++
Sbjct: 146 PGDPFVSCAAM-DMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYF 204
Query: 224 AMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP------NIHHYGCVV 277
++ AG P+ + +AC+ G MFL + G + ++ +V
Sbjct: 205 GLREAGGMPNVVSVCAFFNACA-------GAMFLSLGEQFHGFVVTCGFDMDVSVSNAMV 257
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
D G+ +A + M V+ +S W +++ A H
Sbjct: 258 DFYGKCRCAGKARAVFDGMRVR-NSVSWCSMIVAYAQH 294
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 275/466 (59%), Gaps = 2/466 (0%)
Query: 40 CMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAW 99
C + +L+ G IH +R + L T L+D+Y + A +F+++ +++ V+W
Sbjct: 321 CSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSW 380
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N +++ Y++N++ ++AL +F ++ E KPD +T VL A A L + G++IH YI
Sbjct: 381 NTMVAAYVQNEQYKEALKMFQHILNEP--LKPDAITIASVLPAVAELASRSEGKQIHSYI 438
Query: 160 SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAI 219
+ G GS + N+++ MY+KCG L A E F GM KDVVSW+ MI A++G GR +I
Sbjct: 439 MKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSI 498
Query: 220 ESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDL 279
+ F M+ G P+ TF +L+ACS GL+DEG F + M ++GI P I HYGC++DL
Sbjct: 499 QFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDL 558
Query: 280 LGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDY 339
LGR G LD+A I M + P + IW +LL A R H V L E H++ LK +G Y
Sbjct: 559 LGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCY 618
Query: 340 VLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIY 399
VLL N+Y+ G WE V ++ M E+GL T GCS + + G F+ D SH N IY
Sbjct: 619 VLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIY 678
Query: 400 QMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVA 459
+LD + K++ Y+ +T A+++GN+ YHS KLAI FG+++T G + V
Sbjct: 679 DVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVR 738
Query: 460 KNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
KN RIC DCH AK +S V RE+++ D FHHFR+G CSC DYW
Sbjct: 739 KNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 153/333 (45%), Gaps = 27/333 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R Y+ + +E + +M + I ++ F F IK C + +LM G ++H ++++ G
Sbjct: 95 IIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIG 154
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ LD + L+D+Y A K+FDE+P RD V+WN ++S Y + +L F
Sbjct: 155 FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFK 214
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ R G K D + L AC+ L G +IH + + + SLI MY K
Sbjct: 215 EMLR--LGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGK 272
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A VF + K++V+W+AMI G+ + V PD T +
Sbjct: 273 CGKVDYAERVFNRIYSKNIVAWNAMIGGM---------------QEDDKVIPDVITMINL 317
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGI----LPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
L +CS G + EG + F I LP + +VD+ G+ G L A + M
Sbjct: 318 LPSCSQSGALLEG-----KSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQM 372
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
K + W T++ A ++ ++ +H++
Sbjct: 373 NEK-NMVSWNTMVAAYVQNEQYKEALKMFQHIL 404
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 147/334 (44%), Gaps = 22/334 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV Y + F++M + + F A+ C L G++IH +V+R
Sbjct: 196 MVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSE 255
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+LD + T+L+D+Y K A ++F+ I ++ VAWN +I
Sbjct: 256 LELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM-------------- 301
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+E+ PD +T + +L +C+ GAL G+ IH + + + L +L+ MY K
Sbjct: 302 ---QEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGK 358
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L +A VF M EK++VSW+ M++ N ++A++ F + + PD T V
Sbjct: 359 CGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASV 418
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L A + EG + K G+ N +V + + G L A + M K
Sbjct: 419 LPAVAELASRSEGKQIHSYIMK-LGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCK- 476
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ 334
D W T++ A IH G I+ E++ +
Sbjct: 477 DVVSWNTMIMAYAIH---GFGRTSIQFFSEMRGK 507
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 14/233 (6%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +F+++ DT WNV+I Y N ++A+ + + E G + D+ T V++AC
Sbjct: 77 ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECE--GIRSDNFTFPFVIKAC 134
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
L AL G+K+H + + G+ + +CN LI MY K G + +A +VF MP +D+VSW+
Sbjct: 135 GELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWN 194
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS--HC---GLVDEGMMFLD 258
+M+SG ++G G ++ F M R G D L ACS HC G+ +
Sbjct: 195 SMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRS 254
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+ D + ++ +D+ G+ G +D A ++ + K + W ++G
Sbjct: 255 ELELDIMVQTSL------IDMYGKCGKVDYAERVFNRIYSK-NIVAWNAMIGG 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV AY + +E +F+ + + + + + + + S G QIH+ +++ G
Sbjct: 383 MVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLG 442
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ + ++ +Y+ A + FD + +D V+WN +I Y + R ++ F
Sbjct: 443 LGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFS 502
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+ + G KP+ T + +L AC+ G ++ G
Sbjct: 503 EMRGK--GFKPNGSTFVSLLTACSISGLIDEG 532
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 280/493 (56%), Gaps = 2/493 (0%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
EG + M + + + A C L GL +H ++L + D+ + + ++
Sbjct: 217 EGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAII 276
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
++Y KS A +FD + R+ V W +++ +N +AL LF + E+ K +
Sbjct: 277 NMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM--EQENVKSN 334
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
+ T ++L ACA L A G +H + + G+ + + N+LI MY+K G + A +VF
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFS 394
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M +D+++W+AMI G + +G G+ A+ F M A P+ TFTGVLSAC H GLV E
Sbjct: 395 DMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE 454
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G +L + K FG+ P + HY C+V LL + G L++A + + VK D WRTLL AC
Sbjct: 455 GFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC 514
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
+H++ LG V E ++E+ + G Y LL N+Y+ W+ V ++R+ M +K ++ PG
Sbjct: 515 HVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPG 574
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
S I + V H F +D HP + YQ + E+ +K GY +I + LH++ E+K
Sbjct: 575 VSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEY 634
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
LSYHSEKLAIA+G+L P +I V KNLRIC DCH+ +++S V NR +++RD RFH
Sbjct: 635 YLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFH 694
Query: 493 HFREGRCSCNDYW 505
HFR+GRCSC DYW
Sbjct: 695 HFRDGRCSCLDYW 707
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 168/361 (46%), Gaps = 14/361 (3%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
L + + + + N + + AI C + G Q H +L+ G+ + + L+ +YS
Sbjct: 120 LKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYS 179
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A +++E+P D VA+N ++S + N R+ L + ++ E K D VT
Sbjct: 180 KCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSE--SVKWDKVTF 237
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
+ CA L L G +H + + +++I MY KCG MA VF G+
Sbjct: 238 VNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQS 297
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
++VV W+A+++ NG +A+ F M++ V ++ T+ +L+AC+ G +
Sbjct: 298 RNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSL- 356
Query: 257 LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHK 316
L S+ G ++ ++++ ++G ++ A ++ + M + D W ++ C
Sbjct: 357 LHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM-MHRDIITWNAMI--CGFSH 413
Query: 317 HVTLGERVIEHLIE-LKAQESGDYVLLLNLYSSVGDWEKVKE----LREFMNEKGLQTTP 371
H LG++ + + L A+E +YV + S+ G V+E L M + G+Q P
Sbjct: 414 H-GLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQ--P 470
Query: 372 G 372
G
Sbjct: 471 G 471
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 47/384 (12%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM--TTLMDLYSTFEKSFEA 84
P++P +K +L G IH+ ++ ++ ++ +L++ Y+ + A
Sbjct: 26 PSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIA 85
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
LFD +P+R+ V+W+ L++ Y+ N + + L ++ E P++ + + +C
Sbjct: 86 HNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDM-ISEGNVSPNEYILAIAISSCC 144
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
G +E G + H + + G+ + N+L++MYSKC + A V+ +P D+V++++
Sbjct: 145 DRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNS 204
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-----HCGLVDEGMMFLDR 259
++S L NG+ R+ +E +M V D TF S C+ GL G M
Sbjct: 205 ILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSD 264
Query: 260 MSKDFGILPN-IHHYG-CVVDLLGRA-----------------------GLLDQAYQLIT 294
+ D + I+ YG C L+ R G ++A L +
Sbjct: 265 VECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFS 324
Query: 295 SM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG--DYVL----LLNL 345
M VK + + LL AC L R L+ +++SG +V+ L+N+
Sbjct: 325 KMEQENVKSNEFTYAVLLNAC-----AGLSARRNGSLLHGHSEKSGFKHHVMVGNALINM 379
Query: 346 YSSVGDWEKVKELREFMNEKGLQT 369
Y+ GD E K++ M + + T
Sbjct: 380 YAKSGDIEAAKKVFSDMMHRDIIT 403
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EE LF KM Q+ + +N F + + C + G +H + G++ + L
Sbjct: 317 EEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNAL 376
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF-DNLNREESGCK 130
+++Y+ A K+F ++ RD + WN +I + + + AL +F D L EE
Sbjct: 377 INMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEE---H 433
Query: 131 PDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P+ VT VL AC HLG ++ G +H + + G + ++++ SK G L A
Sbjct: 434 PNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARN 493
Query: 190 VFKGMPEK-DVVSWSAMISG 208
+ P K DVV+W +++
Sbjct: 494 FMRTAPVKWDVVAWRTLLNA 513
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 280/492 (56%), Gaps = 37/492 (7%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT------------ 96
G Q+H V++ G +LD+ ++T L+D+Y ++ E ++F E D
Sbjct: 172 GKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSR 231
Query: 97 -----------------------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
V+W +++C ++N R +A+ LF + + G +P+
Sbjct: 232 NAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTM--QSIGVEPNS 289
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
VT VL A A++ AL G H + G+ + + ++L+ MY+KCG A +F
Sbjct: 290 VTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDA 349
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
MP ++VVSW+AMI G AM+G +A++ F +MQ+ PD TFT VL ACS GL +EG
Sbjct: 350 MPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEG 409
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
+ + M + GI P + HY C+V LLGR+G LD+AY LI M +PDS IW +LLG+CR
Sbjct: 410 RRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCR 469
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
++ +V L E E L +L+ +G+YVLL N+Y+S W+ V +R+ M GL+ GC
Sbjct: 470 VYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGC 529
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S I +K VH + D SHP + I + L+++ ++ G+ LH++ +EK N
Sbjct: 530 SWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNI 589
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
L+ HSEKLA+A G+++T PGT +RV KNLRIC DCH K +S RE+ +RD RFHH
Sbjct: 590 LAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHH 649
Query: 494 FREGRCSCNDYW 505
F++G+CSC DYW
Sbjct: 650 FKDGKCSCGDYW 661
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF M+ + N + +LM G H LR G+ D + + L+
Sbjct: 272 EAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALV 331
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ K+ A +FD +P R+ V+WN +I Y + +A+ LF ++ + + KPD
Sbjct: 332 DMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQ--KPD 389
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISE----HGYGSKMNLCNSLIAMYSKCGSLGMAF 188
VT VL AC+ G E G RY +E HG +M ++ + + G L A+
Sbjct: 390 LVTFTCVLGACSQAGLTEEGR---RYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAY 446
Query: 189 EVFKGMP-EKDVVSWSAMISGLAMNGH 214
++ MP E D W +++ + G+
Sbjct: 447 DLINEMPFEPDSCIWGSLLGSCRVYGN 473
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 7/182 (3%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD L++C A +H G + +SL+ Y + G+ G A V
Sbjct: 18 PDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F MPEK+VV WSA+I+G + G A M+ AGV P+ T+ G++S + G
Sbjct: 75 FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLG---RAGLLDQAYQLITSMGVKPDSTIWRT 307
+ + L RM + G P+ C + +G + Q + + G + D+ +
Sbjct: 135 LDAVTALVRMHSE-GFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTA 193
Query: 308 LL 309
L+
Sbjct: 194 LI 195
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 284/495 (57%), Gaps = 3/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EEG LF +M + + S+ G QIH ++ G +LD + ++L
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSL 132
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y K + + +P R+ VAWN LI +N L L+ + + SGC+P
Sbjct: 133 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM--KISGCRP 190
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ +T + VL +C+ L G++IH + G S + + +SLI+MYSKCG LG A + F
Sbjct: 191 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLV 250
++D V WS+MIS +G G +AI+ F +M ++ + ++ F +L ACSH GL
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLK 310
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ D M + +G P + HY CVVDLLGRAG LDQA +I SM +KPD IW+TLL
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLS 370
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC IHK+ + ++V + ++E+ +S YVLL N+++S W V E+R+ M +K ++
Sbjct: 371 ACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
G S KG VH+F + D S + EIY L E+ ++K+ GY + S LH++ EEK
Sbjct: 431 AGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 490
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+ L HSEKLA+AF ++ P G IR+ KNLR+C DCH K +S + NRE+ +RD R
Sbjct: 491 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSR 550
Query: 491 FHHFREGRCSCNDYW 505
FHHF G+CSC DYW
Sbjct: 551 FHHFINGKCSCGDYW 565
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 127/284 (44%), Gaps = 6/284 (2%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FDE+P R WN +I+ I+ + + L LF ++ G PD+ T V
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHG--LGFSPDEYTLGSVFSGS 101
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L ++ G++IH Y ++G + + +SL MY + G L V + MP +++V+W+
Sbjct: 102 AGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWN 161
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+I G A NG + + M+ +G P+ TF VLS+CS + +G K
Sbjct: 162 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK- 220
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G + ++ + + G L A + + D +W +++ A H +
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIK 279
Query: 324 VIEHLIELKAQESGDYVLLLNLY--SSVGDWEKVKELREFMNEK 365
+ + E E + L LY S G +K EL + M EK
Sbjct: 280 LFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
PE YL++ M+ N + C G QIHA ++ G ++++
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 232
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +YS +A K F E D V W+ +IS Y + + +A+ LF+++ E++ +
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSM-AEQTEME 291
Query: 131 PDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
++V L +L AC+H G + G E + ++G+ + ++ + + G L A
Sbjct: 292 VNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 351
Query: 190 VFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESF 222
+ K MP K D V W ++S ++ + A + F
Sbjct: 352 IIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVF 385
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N LI Y + G L A +VF MP++ + +W+AMI+GL + + + F M G
Sbjct: 29 NILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFS 88
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ T V S + V G K +G+ ++ + + R G L
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYAIK-YGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 292 LITSMGVKPDSTIWRTLL 309
+I SM V+ + W TL+
Sbjct: 148 VIRSMPVR-NLVAWNTLI 164
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 295/511 (57%), Gaps = 8/511 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY + L+ M + + F + + L GGLQ HA+ ++ G
Sbjct: 212 MIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTG 271
Query: 61 YQLDSQLMTTLMDLYSTFEKSF-EACKLFDEIPQRDTVAWNVLISCYIRNQR-TRDALCL 118
+ + + + L+D+Y+ E+ K+F+EI D V WN +IS Y +N+ + +AL
Sbjct: 272 FNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALEC 331
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAM 177
F + R +G PDD + + + AC++L + G++ H + S ++++ N+L+ M
Sbjct: 332 FRQMQR--AGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTM 389
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YSKCG+L A ++F+ MP+ + V+ +++I+G A +G G +++ F M A + P T
Sbjct: 390 YSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITL 449
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
+LSAC+H G V+EG + + M FGI P HY C++DLLGRAG L +A +LI +M
Sbjct: 450 VSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMP 509
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
P S W LLGACR + ++ L E+ ++L+ + Y++L ++YS+ WE+
Sbjct: 510 FSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAAR 569
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ M ++G++ PGCS I L VH FV +D SHPRI EI+ LDE+ ++K AGYV +
Sbjct: 570 IRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPD 629
Query: 418 ITSEL---HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+ G +EK L++HSEKLA+AFG+L T G + V KNLRIC DCHN K
Sbjct: 630 VRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKF 689
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S + R++ +RD RFH F +GRCSC DYW
Sbjct: 690 MSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 13/368 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGL-QIHARVLRD 59
++ AY+ LF +MR+ + + F S I C C+ +G + Q+H+
Sbjct: 111 LINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITAC---CNHVGLIRQLHSLAFSS 167
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ--RDTVAWNVLISCYIRNQRTRDALC 117
G+ + +L+ YS EA +F+ + + RD V+WN +I Y +++R AL
Sbjct: 168 GFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALA 227
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
L+ ++ G + D T VL + + L G + H + G+ ++ + LI M
Sbjct: 228 LYRDMVHR--GFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDM 285
Query: 178 YSKCGS-LGMAFEVFKGMPEKDVVSWSAMISGLAMNGH-GRDAIESFGAMQRAGVFPDDQ 235
Y+KCG+ + + +VF+ + D+V W+ MISG + N +A+E F MQRAG +PDD
Sbjct: 286 YAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDC 345
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
+F +SACS+ +G F K I +V + + G L A +L
Sbjct: 346 SFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQR 405
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKV 355
M T+ + G + H T + E + L A + + L+++ S+ +V
Sbjct: 406 MPQHNTVTLNSIIAGYAQ-HGIGTESLNLFEQM--LAASIAPTSITLVSILSACAHTGRV 462
Query: 356 KELREFMN 363
+E +++ N
Sbjct: 463 EEGKKYFN 470
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 9/240 (3%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A LFD+IPQ D V++N LI+ Y T AL LF + E G D T V+ AC
Sbjct: 93 AHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEM--REMGLVMDGFTFSGVITAC 150
Query: 144 A-HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE--KDVV 200
H+G + ++H G+ S +++ NSL+ YSK G L A VF GM E +D V
Sbjct: 151 CNHVGLI---RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEV 207
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW++MI + G A+ + M G D T VL+ S + G+ F +
Sbjct: 208 SWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKA 267
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
K G N H ++D+ + G + + D +W T++ +K +++
Sbjct: 268 IKT-GFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSV 326
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N+LIA Y+K + +A +F +P+ D+VS++ +I+ A G A+ FG M+ G+
Sbjct: 78 NALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137
Query: 232 PDDQTFTGVLSA-CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
D TF+GV++A C+H GL+ + L ++ G + ++ + G+L++A
Sbjct: 138 MDGFTFSGVITACCNHVGLIRQ----LHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAE 193
Query: 291 QLITSMGVK-PDSTIWRTLLGACRIHK 316
+ MG + D W +++ A HK
Sbjct: 194 MVFNGMGEEVRDEVSWNSMIVAYGQHK 220
>gi|9758246|dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 262/422 (62%), Gaps = 4/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+ ++ + WN++I Y+RN + +AL N+ + KP+ + L AC
Sbjct: 94 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM-LSFTDIKPNKFSFASSLAAC 152
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG L + +H + + G L ++L+ +Y+KCG +G + EVF + DV W+
Sbjct: 153 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 212
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI+G A +G +AI F M+ V PD TF G+L+ CSHCGL++EG + MS+
Sbjct: 213 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 272
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
F I P + HYG +VDLLGRAG + +AY+LI SM ++PD IWR+LL + R +K+ LGE
Sbjct: 273 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 332
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
I++L + K SGDYVLL N+YSS WE +++RE M+++G++ G S + G++H
Sbjct: 333 AIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIH 389
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
F D SH IY++L+ + ++ K G+V++ L ++ EEK L+YHSEKLA+
Sbjct: 390 RFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 449
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+ +L + PGT IR+ KN+R+C DCHN+ K +S + NR +I+RDR+RFH F +G CSC D
Sbjct: 450 AYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRD 509
Query: 504 YW 505
YW
Sbjct: 510 YW 511
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + EE + M I N F+ + ++ C + L +H+ ++
Sbjct: 112 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 171
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +L++ L + L+D+Y+ + ++F + + D WN +I+ + + +A+ +F
Sbjct: 172 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 231
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMY 178
+ E PD +T L +L C+H G LE G++ +S K+ +++ +
Sbjct: 232 SEMEAEH--VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLL 289
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMIS 207
+ G + A+E+ + MP E DVV W +++S
Sbjct: 290 GRAGRVKEAYELIESMPIEPDVVIWRSLLS 319
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGV 230
N +I K G G+A +V + +++V++W+ MI G N +A+++ M +
Sbjct: 79 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 138
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P+ +F L+AC+ G + ++ + D GI N +VD+ + G + +
Sbjct: 139 KPNKFSFASSLAACARLGDLHHA-KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 197
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL-IELKAQESGDYVLLLNLYSSV 349
++ S+ + D +IW ++ H T RV + E + +S ++ LL S
Sbjct: 198 EVFYSVK-RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 256
Query: 350 GDWEKVKELREFMNEK 365
G E+ KE M+ +
Sbjct: 257 GLLEEGKEYFGLMSRR 272
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 202/507 (39%), Positives = 297/507 (58%), Gaps = 4/507 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+ RA + P E + ++ +P + FA + A K C +L G+ +HA + G
Sbjct: 80 LARAAAHRGLPGEAIAFYGRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLLG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + T L+ LYS + A KLFD I R VAWN +IS Y +N A+ ++
Sbjct: 140 FGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYR 199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + PD T + L ACA GAL+ G ++ R I + L ++L+ MY++
Sbjct: 200 EMQVAQ--VVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYAR 257
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + A + F + E++VV+W++MI+G M+GHG +AI+ F M+ G P+D TF V
Sbjct: 258 CGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPNDVTFVAV 317
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT-SMGVK 299
L+AC+H GLV+EG D M + +G++P HY +VD+ GRAGLLD A Q I S+ +
Sbjct: 318 LAACAHAGLVNEGRSAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIRDSIPGE 377
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
P +W +LGAC++HK+ LG V E LI L+ + VLL N+Y+ G V+++R
Sbjct: 378 PGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVR 437
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
M ++ L+ G S I L G H F + + SH + EIYQ L+E+ ++ AGYV E
Sbjct: 438 NVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYQYLEELIHRISDAGYVPETD 497
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT-IRVAKNLRICVDCHNFAKVLSGV 478
S LH L EE+ AL YHSEKLA+A+G++ + TT IRV KNLRIC DCH K +S V
Sbjct: 498 SVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTTPIRVIKNLRICGDCHLAIKFMSSV 557
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
+RE+I+RD+ RFHHF++G+CSC +YW
Sbjct: 558 ESREIIVRDKHRFHHFKDGKCSCLEYW 584
>gi|413938369|gb|AFW72920.1| hypothetical protein ZEAMMB73_491813 [Zea mays]
Length = 625
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 285/497 (57%), Gaps = 4/497 (0%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
P L+ + + + + F +K C + +L G Q+ A +++ G+Q D + +
Sbjct: 131 PAAALRLYIDGLEAGVSPDSYTFPFVLKACAQLAALQEGRQLQAHIVKLGFQHDEHVQNS 190
Query: 71 LMDLYSTFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
L+ Y A FD E +R TV+W+ L++ Y + + L F ++ + G
Sbjct: 191 LISFYGKCGAPAMARLAFDRVEAEERTTVSWSALLAAYTKAGLWGECLASFGSMMLD--G 248
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
+PD+ + + L ACAHLG+ + G +H + + + SL+ MY+KCGS+ A
Sbjct: 249 WRPDESSMVSALSACAHLGSFDAGRSVHCALLRNTARLNTIMLTSLLDMYAKCGSIEKAA 308
Query: 189 EVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCG 248
F M +K ++SAM+SGLA++G GR A++ F AM R G PD + GVL+ACS G
Sbjct: 309 AAFDAMDDKSAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAPDAAAYVGVLNACSRAG 368
Query: 249 LVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
L+++G+ DRM + + PN HYGC+VDL+ RAG LD A LI +M P T WR+L
Sbjct: 369 LLEDGLRCFDRMRLEHKVAPNALHYGCMVDLMARAGRLDDARALIGTMPTGPTDTAWRSL 428
Query: 309 LGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
L ACRIH + L ++ L L A +GDYV++ ++++ +W LR + GL
Sbjct: 429 LNACRIHGDLDLAWHALQELRRLGAANAGDYVIVADMHARAKNWTAAAALRTEAVDSGLA 488
Query: 369 TTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAE 428
+ G S + ++G +H FV D++HPR +IY+ML ++ QL+ GY + + + G E
Sbjct: 489 QSLGFSAVEVRGELHRFVSQDMAHPRTRDIYEMLHQMEWQLRFDGYKPDTSEVALDAGEE 548
Query: 429 EKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDR 488
EKG ++ HS+KLA+AFG+L+TP G +RV NLR+ +CH ++ ++S ++ R+++IRDR
Sbjct: 549 EKGRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGRDIVIRDR 608
Query: 489 LRFHHFREGRCSCNDYW 505
R H FR G CSC DYW
Sbjct: 609 NRLHRFRCGTCSCRDYW 625
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 11/274 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIR----NQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
A +F+ + + + +N L+ ++ ++ AL L+ ++ E+G PD T V
Sbjct: 99 AASIFESLVEPEAFDYNTLMRGHVSGGGGDRDPAAALRLY--IDGLEAGVSPDSYTFPFV 156
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM--PEK 197
L+ACA L AL+ G ++ +I + G+ ++ NSLI+ Y KCG+ MA F + E+
Sbjct: 157 LKACAQLAALQEGRQLQAHIVKLGFQHDEHVQNSLISFYGKCGAPAMARLAFDRVEAEER 216
Query: 198 DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFL 257
VSWSA+++ G + + SFG+M G PD+ + LSAC+H G D G
Sbjct: 217 TTVSWSALLAAYTKAGLWGECLASFGSMMLDGWRPDESSMVSALSACAHLGSFDAGRSVH 276
Query: 258 DRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
+ ++ L I ++D+ + G +++A +M K + + +L +H
Sbjct: 277 CALLRNTARLNTI-MLTSLLDMYAKCGSIEKAAAAFDAMDDK-SAWAYSAMLSGLALHGD 334
Query: 318 VTLGERVIEHLI-ELKAQESGDYVLLLNLYSSVG 350
+V + ++ E A ++ YV +LN S G
Sbjct: 335 GRKALQVFDAMVREGHAPDAAAYVGVLNACSRAG 368
>gi|145359106|ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990
gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 262/422 (62%), Gaps = 4/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+ ++ + WN++I Y+RN + +AL N+ + KP+ + L AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM-LSFTDIKPNKFSFASSLAAC 175
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG L + +H + + G L ++L+ +Y+KCG +G + EVF + DV W+
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI+G A +G +AI F M+ V PD TF G+L+ CSHCGL++EG + MS+
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
F I P + HYG +VDLLGRAG + +AY+LI SM ++PD IWR+LL + R +K+ LGE
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
I++L + K SGDYVLL N+YSS WE +++RE M+++G++ G S + G++H
Sbjct: 356 AIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIH 412
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
F D SH IY++L+ + ++ K G+V++ L ++ EEK L+YHSEKLA+
Sbjct: 413 RFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 472
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+ +L + PGT IR+ KN+R+C DCHN+ K +S + NR +I+RDR+RFH F +G CSC D
Sbjct: 473 AYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRD 532
Query: 504 YW 505
YW
Sbjct: 533 YW 534
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + EE + M I N F+ + ++ C + L +H+ ++
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +L++ L + L+D+Y+ + ++F + + D WN +I+ + + +A+ +F
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMY 178
+ E PD +T L +L C+H G LE G++ +S K+ +++ +
Sbjct: 255 SEMEAEH--VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLL 312
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMIS 207
+ G + A+E+ + MP E DVV W +++S
Sbjct: 313 GRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGV 230
N +I K G G+A +V + +++V++W+ MI G N +A+++ M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P+ +F L+AC+ G + ++ + D GI N +VD+ + G + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHA-KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL-IELKAQESGDYVLLLNLYSSV 349
++ S+ + D +IW ++ H T RV + E + +S ++ LL S
Sbjct: 221 EVFYSVK-RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 350 GDWEKVKELREFMNEK 365
G E+ KE M+ +
Sbjct: 280 GLLEEGKEYFGLMSRR 295
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/455 (40%), Positives = 267/455 (58%), Gaps = 5/455 (1%)
Query: 54 ARVL---RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
ARVL G LD TT++ +A ++FD +P R+ V+WN +IS Y++
Sbjct: 150 ARVLFRTSGGGALDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKAD 209
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R DAL +FD + G + + L AC GAL G +I+R++ + G L
Sbjct: 210 RFLDALEVFDEMR--ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKL 267
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+++ MY KCG + A+ VF +P + + +W+ MI G A++G DA+E F M+ AGV
Sbjct: 268 ATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGV 327
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PDD T VL+AC+H G V EG +L+ + GI P HYGC+VDL GRAG LD+A
Sbjct: 328 APDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAK 387
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
++I M + PD + LLGAC+IH V LGE + +I+L SG YVLL NL + G
Sbjct: 388 KVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAG 447
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
W++V ++R M+E+ + G S I + G EF ++ HP+ EIY M ++ +++
Sbjct: 448 RWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIR 507
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GYV + LH++ E+K AL HSEKLAIAFG+L P T+R+ KNLR+C DCH
Sbjct: 508 AEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHE 567
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V+ RE+++RDR RFHHF++G CSC DYW
Sbjct: 568 ATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F++MR + N F + A+ C +L G +I+ V + G
Sbjct: 201 MISGYVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSG 260
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D++L T ++D+Y EA ++FD +P R WN +I + + R DAL LF
Sbjct: 261 IEVDAKLATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFH 320
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +G PDDVT L VL ACAH G + G + ++ +S HG K ++ ++
Sbjct: 321 QM--EAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFG 378
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G L A +V MP + D+ A++ ++G
Sbjct: 379 RAGQLDEAKKVIDEMPMDPDLAVLGALLGACKIHG 413
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 297/538 (55%), Gaps = 33/538 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +E LF++M+ I + F+ S + C+ G ++H ++R+
Sbjct: 551 MIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT 610
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L L+D+Y+ A K++D+ ++D + NV++S ++ + R DA LFD
Sbjct: 611 MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFD 670
Query: 121 NLNRE-----------------------------ESGCKPDDVTCLLVLQACAHLGALEF 151
+ + ES + D +T + ++ C+ L ALE
Sbjct: 671 QMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEH 730
Query: 152 GEKIHRYISEHGY-GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G+++H I + G+ + L +L+ MYSKCG++ A VF M K++VSW+AMISG +
Sbjct: 731 GDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYS 790
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNI 270
+G ++A+ + M + G++P++ TF +LSACSH GLV+EG+ M +D+ I
Sbjct: 791 KHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKA 850
Query: 271 HHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
HY C+VDLLGRAG L+ A + + M ++P+ + W LLGACR+HK + +G + L E
Sbjct: 851 EHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFE 910
Query: 331 LKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDV 390
L Q G YV++ N+Y++ G W++V+++R+ M KG++ PG S I + + F
Sbjct: 911 LDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSK 970
Query: 391 SHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSY---HSEKLAIAFGV 447
+HP+ EIY L + Q K GY+ + + L N+ ++ Y HSE+LA++ G+
Sbjct: 971 THPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGL 1030
Query: 448 LATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++ P +TIRV KNLRIC DCH K +S + R +I RD RFHHF G+CSC DYW
Sbjct: 1031 ISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 47/390 (12%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y S EE + +F++M + + + F + A++ C S GG Q+H++++ G
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACG 306
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++ D+ + L+D+Y+ + K+FDE+ +R+ V WN +IS + DAL LF
Sbjct: 307 FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF- 365
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L +ESG K + +L A A L + G ++H ++ + S + L ++L+ MYSK
Sbjct: 366 -LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSK 424
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTFTG 239
CG + A +VF+ + E++ VS++A+++G G +A+E + MQ G+ PD TFT
Sbjct: 425 CGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTT 484
Query: 240 VLSAC-----------------------------------SHCGLVDEGMMFLDRMSKDF 264
+L+ C S CG ++ +RM++
Sbjct: 485 LLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE-- 542
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLG 321
N + + +++ + G +A +L M G+KPD ++L +C G
Sbjct: 543 ---RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 599
Query: 322 ERVIEHLIELKAQESGDY-VLLLNLYSSVG 350
+ ++ +E G V+L+++Y+ G
Sbjct: 600 RELHNFIVRNTMEEEGILQVVLVDMYAKCG 629
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 151/303 (49%), Gaps = 11/303 (3%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ LF +M++ +N F + + G ++H ++R+ D L + L+
Sbjct: 360 DALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALV 419
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+YS EA ++F + +R+ V++N L++ Y++ + +AL L+ ++ + E G +PD
Sbjct: 420 DMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDM-QSEDGIQPD 478
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T +L CA+ G +IH ++ + + L+ MYS+CG L A E+F
Sbjct: 479 QFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFN 538
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M E++ SW++MI G NG ++A+ F MQ G+ PD + + +LS+C +
Sbjct: 539 RMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK 598
Query: 253 GM---MFLDRMS-KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTL 308
G F+ R + ++ GIL + +VD+ + G +D A++ + +K D + +
Sbjct: 599 GRELHNFIVRNTMEEEGILQVV-----LVDMYAKCGSMDYAWK-VYDQTIKKDVILNNVM 652
Query: 309 LGA 311
+ A
Sbjct: 653 VSA 655
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 178/403 (44%), Gaps = 43/403 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AY+ E L+ +MR ++ F IK C+ + G Q+ + V++ G
Sbjct: 146 MILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAG 205
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D Y+ F +A DEI V WN +I+ Y++ +A +FD
Sbjct: 206 LNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFD 265
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G PD+ T L+ C L + + G+++H + G+ + N+LI MY+K
Sbjct: 266 RMLK--IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAK 323
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C +VF M E++ V+W+++IS A GH DA+ F MQ +G + +
Sbjct: 324 CDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSI 383
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---- 296
L A + + +G + ++ + +I +VD+ + G++++A+Q+ S+
Sbjct: 384 LMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERN 442
Query: 297 -------------------------------GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
G++PD + TLL C ++ G ++
Sbjct: 443 EVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIH 502
Query: 326 EHLIELKAQESGDYVL---LLNLYSSVGDWEKVKELREFMNEK 365
HLI +A + + ++ L+++YS G KE+ M E+
Sbjct: 503 AHLI--RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 543
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 5/220 (2%)
Query: 28 TNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST---FEKSFEA 84
NP S I+ C+ S G IH +++ +GY D+ LMT ++ LY+ + A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 85 CKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACA 144
KLF+E+P+R+ AWN +I Y R + L L+ + SG D T V++AC
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRM--RGSGNFSDKFTFPSVIKACI 186
Query: 145 HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSA 204
+ + ++ + + G + + +L+ Y++ G + A + VV+W+A
Sbjct: 187 AMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNA 246
Query: 205 MISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
+I+G +A F M + GV PD+ TF L C
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC 286
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG---MAFEVFKGMP 195
++Q C + + G+ IH + +GY L ++ +Y++ G L A ++F+ MP
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD-EGM 254
E+++ +W+ MI A + + +G M+ +G F D TF V+ AC + D G+
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC--IAMEDMGGV 194
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
L G+ N+ G +VD R G +D A
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDA 229
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 272/443 (61%), Gaps = 20/443 (4%)
Query: 50 LQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVL------- 102
L ++A +LR G+ + +L+ ++ L +P +A V
Sbjct: 58 LPLYAHLLRAGHHPTPHTLPSLL----------KSLALSPAVPGARGLALGVHAHAVKLG 107
Query: 103 ISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
++ ++ R+AL LF + + G PDD + VL ACA LG LE G+ +H Y+ +
Sbjct: 108 LAGFLLAGDGREALGLFARM--QADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKAN 165
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
+ L +L+ MY+KCG + +A EVFK M EK+V++W+ MI GLAM+G G +A+E F
Sbjct: 166 NIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELF 225
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
M+R GV PDD F G L AC+H GLVD+G D M + +GI P I HYGC+VDLL R
Sbjct: 226 SQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLAR 285
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLL 342
GLL++A +++ M +KPD+ IW L+ CR HK+V L E V++H IEL+ +SG YVLL
Sbjct: 286 NGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLL 345
Query: 343 LNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQML 402
N+Y++ G +E+R M EKG+ TPGCST+ +KGV+H+F+V D+SHP I EI
Sbjct: 346 GNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKW 405
Query: 403 DEINKQLKI-AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKN 461
DEI+ ++++ GYV + L ++ EEK NALS HSEK+AIAF ++ T IR+ KN
Sbjct: 406 DEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKN 465
Query: 462 LRICVDCHNFAKVLSGVYNREVI 484
LR+C DCH+ K++S V++ V+
Sbjct: 466 LRVCHDCHHVTKLISKVFDLTVV 488
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
+ ++ E LF +M+ + + + C + L G +H + + ++
Sbjct: 110 GFLLAGDGREALGLFARMQADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKANNIRI 169
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
L T L+D+Y+ + A ++F + +++ +AW +I + R +AL LF +
Sbjct: 170 TVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQME 229
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
R G KPDD+ + L AC H G ++ G E + ++G K+ ++ + ++ G
Sbjct: 230 R--LGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNG 287
Query: 183 SLGMAFEVFKGMPEK-DVVSWSAMISG 208
L A E+ + MP K D + W A+++G
Sbjct: 288 LLNEAREMVEKMPMKPDALIWGALMAG 314
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 292/494 (59%), Gaps = 2/494 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+EG + K + N +++ L LQ+H+R++R G+ + + L
Sbjct: 219 KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGAL 278
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+++Y K A ++FD+ ++ ++ Y +++ +AL LF ++ +E P
Sbjct: 279 INMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE--VPP 336
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
++ T ++L + A L L+ G+ +H + + GY + + + N+L+ MY+K GS+ A + F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
GM +D+V+W+ MISG + +G GR+A+E+F M G P+ TF GVL ACSH G V+
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G+ + +++ K F + P+I HY C+V LL +AG+ A + + ++ D WRTLL A
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
C + ++ LG++V E+ IE +SG YVLL N+++ +WE V ++R MN +G++ P
Sbjct: 517 CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEP 576
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S IG++ H F+ +D HP I IY + E+ ++K GY ++ H++ E++
Sbjct: 577 GVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQRE 636
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ LSYHSEKLA+A+G++ TP + + V KN+RIC DCH+ K++S + R ++IRD RF
Sbjct: 637 DNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRF 696
Query: 492 HHFREGRCSCNDYW 505
HHF +G+CSC DYW
Sbjct: 697 HHFLDGQCSCCDYW 710
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY S EE LF KM K +P N + + + + L G +H VL+ G
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + L+++Y+ +A K F + RD V WN +IS + R+AL FD
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +G P+ +T + VLQAC+H+G +E G ++ + + + ++ + S
Sbjct: 429 RMIF--TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
K G A + + P E DVV+W +++
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 8/327 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M++ Y S E LF+ M N F + K C + G Q H L+
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + TL+ +YS + EA ++ D++P D ++ +S Y+ ++ L +
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
E+ +++T L L+ ++L L ++H + G+ +++ C +LI MY
Sbjct: 226 RKTANEDFVW--NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYG 283
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A VF +++ + ++ + +A+ F M V P++ TF
Sbjct: 284 KCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAI 343
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L++ + L+ +G + + K G ++ +V++ ++G ++ A + + M +
Sbjct: 344 LLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIE 326
D W T++ C H LG +E
Sbjct: 403 -DIVTWNTMISGC---SHHGLGREALE 425
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 15/271 (5%)
Query: 22 RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL--------RDGYQLDSQLMTTLMD 73
+ K+ P + +K C L G IHA ++ D YQ++S L++
Sbjct: 23 KSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINS-----LIN 77
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
LY ++ A KLFD +P+R+ V+W ++ Y + + L LF ++ +P++
Sbjct: 78 LYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES-RPNE 136
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
+V ++C++ G +E G++ H ++G S + N+L+ MYS C G A V
Sbjct: 137 FVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
+P D+ +S+ +SG G ++ ++ ++ T+ L S+ ++
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
+ RM + FG + G ++++ G+ G
Sbjct: 257 LQVHSRMVR-FGFNAEVEACGALINMYGKCG 286
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 285/505 (56%), Gaps = 5/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV A + + +E LF +M+ + + + F + + C+ +L G IHA V G
Sbjct: 609 MVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIG 668
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++YS EA F+ + RD V+WN++ + Y + ++A+ LF
Sbjct: 669 LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFR 728
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ E G KPD +T L + G+ H +E G S +++ L+ +Y+K
Sbjct: 729 QMQLE--GVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAK 786
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A +F+G + VV +A+I LA +G +A++ F MQ+ GV PD T +
Sbjct: 787 CGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC H G+V+EG M + FGI P + HY C VDLLGRAG L+ A Q+I M +
Sbjct: 847 ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W +LLG C++ LGER + ++EL S +V+L N+Y + G W+ R+
Sbjct: 907 NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ ++ PG S + VHEFV D SHP+ +EIY +LD++ ++ AGY A+
Sbjct: 967 KMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGL 1026
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++ + E K AL YHSE++AIAFG++ATPP TT+++ KNLR+C DCH K +S V
Sbjct: 1027 DVED---ELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMG 1083
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD LRFHHF G CSC D W
Sbjct: 1084 REIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 143/327 (43%), Gaps = 18/327 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ A + + F LF M + N + + C L G IHA +
Sbjct: 97 LISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWEL 156
Query: 60 GYQLDSQLMT----TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-TRD 114
G + S T ++++Y+ +A +F IP++D V+W + Y + +R D
Sbjct: 157 GLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPD 216
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL +F + + P+ +T + L AC +L G +H + E G N+L
Sbjct: 217 ALRIFREMLLQP--LAPNVITFITALGACT---SLRDGTWLHSLLHEASLGFDPLASNAL 271
Query: 175 IAMYSKCGSLGMAFEVFKGMP---EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
I MY KCG A+ VFK M E D+VSW+AMIS G DA+ F ++ G+
Sbjct: 272 INMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMR 331
Query: 232 PDDQTFTGVLSACSHCGLVDEGMM--FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
P+ T +L+A + G VD G F R+ + G L ++ ++ + + G A
Sbjct: 332 PNSVTLITILNALAASG-VDFGAARGFHGRIWES-GYLRDVVIGNAIISMYAKCGFFSAA 389
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHK 316
+ + + K D W T+LGA K
Sbjct: 390 WAVFRRIRWKCDVISWNTMLGASEDRK 416
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 21/310 (6%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ +F +M + + N A+ C SL G +H+ + D L+
Sbjct: 216 DALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEASLGFDPLASNALI 272
Query: 73 DLYST---FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
++Y +E ++ K + D V+WN +IS + R DA+ +F L E G
Sbjct: 273 NMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLE--GM 330
Query: 130 KPDDVTCLLVLQACAHLGALEFGEK--IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+P+ VT + +L A A G ++FG H I E GY + + N++I+MY+KCG A
Sbjct: 331 RPNSVTLITILNALAASG-VDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAA 389
Query: 188 FEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
+ VF+ + K DV+SW+ M+ + +F M AG+ P+ +F +L+ACS+
Sbjct: 390 WAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449
Query: 247 CGLVDEGM----MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+D G + L R +D+ + ++ +V + G+ G + +A + M + S
Sbjct: 450 SEALDFGRKIHSLILTR-RRDY-VESSVATM--LVSMYGKCGSISEAELVFKEMPLPSRS 505
Query: 303 TI-WRTLLGA 311
+ W +LGA
Sbjct: 506 LVTWNVMLGA 515
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 26/289 (8%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C+ L G H + G + L L+++Y EA +F ++ +R+
Sbjct: 32 LQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNV 91
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+W LIS + A LF + E S P+ T + +L ACA+ L G IH
Sbjct: 92 VSWTALISANAQCGAFARAFALFRTMLLESSAA-PNSYTLVAMLNACANSRDLAIGRSIH 150
Query: 157 RYISEHGY----GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
I E G + + N++I MY+KCGSL A VF +PEKDVVSW+AM A
Sbjct: 151 AMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQE 210
Query: 213 GHGR-DAIESFGAMQRAGVFPDDQTFTGVLSACSHC-------GLVDEGMMFLDRMSKDF 264
DA+ F M + P+ TF L AC+ L+ E + D ++ +
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASN- 269
Query: 265 GILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP--DSTIWRTLLGA 311
++++ G+ G + AY + +M + D W ++ A
Sbjct: 270 ----------ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA 308
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL-RDGYQLDSQLMTTLMDLYS 76
F M I N + + C +L G +IH+ +L R ++S + T L+ +Y
Sbjct: 425 FHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYG 484
Query: 77 TFEKSFEACKLFDE--IPQRDTVAWNVLISCYIRNQRTRDAL-CLFDNLNREESGCKPDD 133
EA +F E +P R V WNV++ Y +N R+++A L + L + G PD
Sbjct: 485 KCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML---QGGVLPDA 541
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
++ VL +C + + + I E GY S L +LI+M+ +C L A VF
Sbjct: 542 LSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LETALISMHGRCRELEQARSVFNE 597
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--------- 244
M DVVSW+AM+S A N ++ F MQ GV PD T L C
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLG 657
Query: 245 --------------------------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
S+CG E + F + M + NI
Sbjct: 658 KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA---- 713
Query: 279 LLGRAGLLDQAYQLITSM---GVKPDSTIWRTLL 309
+AGL +A L M GVKPD + T L
Sbjct: 714 -YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTL 746
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 114/281 (40%), Gaps = 51/281 (18%)
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
LC R + + T LL Q+C L G+ H I+ G + L N LI
Sbjct: 10 LCSLSGAVRVDRAADLQEYTALL--QSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLI 67
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDD 234
MY +CGSL A +F M E++VVSW+A+IS A G A F M + P+
Sbjct: 68 NMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNS 127
Query: 235 QTFTGVLSACSHC-----GLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
T +L+AC++ G M++ L+R S ++ N ++++ + G L
Sbjct: 128 YTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGN-----AMINMYAKCGSL 182
Query: 287 DQAYQLITSMGVKPDSTIWRTLLG-----------ACRIHKHV---TLGERVIEHLIELK 332
+ A + ++ K D W + G A RI + + L VI + L
Sbjct: 183 EDAIAVFLAIPEK-DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALG 241
Query: 333 AQES---GDYV-----------------LLLNLYSSVGDWE 353
A S G ++ L+N+Y GDWE
Sbjct: 242 ACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWE 282
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/455 (40%), Positives = 269/455 (59%), Gaps = 3/455 (0%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
++H+ G +D ++ L+ YS A ++FD++ +R+ W ++I ++
Sbjct: 646 EVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHG 704
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
DA F + RE G PD T + +L ACA GALE+ +++H + G S + +
Sbjct: 705 CGHDAFSHFLQMLRE--GIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRV 762
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N+L+ MY+KCGS+ A VF M E+DV SW+ MI GLA +G G +A++ F M+ G
Sbjct: 763 GNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGF 822
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
P+ ++ VL+ACSH GLVDEG M++D+GI P + HY C+VDLLGRAGLL++A
Sbjct: 823 KPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAE 882
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
I +M ++PD W LLGAC + ++ + E + ++LK + + YVLL N+Y++ G
Sbjct: 883 LFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATG 942
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
WE+ +R M KG++ PG S I + +H FVV D SHP EIY L+++ ++LK
Sbjct: 943 KWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLK 1002
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GYV + L N E K AL HSEKLAI +G++ T IRV KNLR+C DCH
Sbjct: 1003 AKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHT 1062
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S + RE++ RD RFHHF++G CSC DYW
Sbjct: 1063 ATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 184/372 (49%), Gaps = 11/372 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ E+ +++KMRQ+ N +K C +L G +IHA +++ G
Sbjct: 190 MIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSG 249
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+Q D ++ T L+++Y +A +FD++ +R+ ++W V+I R ++A LF
Sbjct: 250 FQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFL 309
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ RE G P+ T + +L A A GALE+ +++H + G + + N+L+ MY+K
Sbjct: 310 QMQRE--GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 367
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ A VF GM E+D+ SW+ MI GLA +G G++A F MQR G P+ T+ +
Sbjct: 368 SGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSI 427
Query: 241 LSACSHCGLVD-EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
L+A + E + + + +++ G + ++ ++ + + G +D A + M
Sbjct: 428 LNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM-CD 486
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKV 355
D W ++G G ++++ + +S Y+ LLN + S E V
Sbjct: 487 RDVISWNAMMGGL---AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWV 543
Query: 356 KELREFMNEKGL 367
E+ + E GL
Sbjct: 544 NEVHKHAVETGL 555
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 17/364 (4%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
+E F+LF +M+++ N + + +L ++H+ + G LD ++ L
Sbjct: 302 QEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNAL 361
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ +A +FD + +RD +W V+I ++ R ++A LF L + +GC P
Sbjct: 362 VHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLF--LQMQRNGCLP 419
Query: 132 DDVTCLLVLQACA--HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
+ T L +L A A ALE+ + +H++ E G+ S + + N+LI MY+KCGS+ A
Sbjct: 420 NLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARL 479
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF GM ++DV+SW+AM+ GLA NG G +A F MQ+ G+ PD T+ +L+
Sbjct: 480 VFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDA 539
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ E + + + + + G++ + + + R G +D A L + V+ +T W ++
Sbjct: 540 L-EWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTT-WNAMI 597
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESG---DYVLLLNLYSSVGDWEK---VKELREFMN 363
G + G + +++ Q G D +N+ S+ D E VKE+
Sbjct: 598 GGAAQQR---CGREALSLFLQM--QREGFIPDATTFINILSANVDEEALEWVKEVHSHAT 652
Query: 364 EKGL 367
+ GL
Sbjct: 653 DAGL 656
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 156/293 (53%), Gaps = 4/293 (1%)
Query: 23 QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF 82
Q+ I + F+ ++ C+K ++ Q+H +++ G + + + L+ +Y +
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
A ++FD++ +++ W +I Y DA+ ++D + R+E G +P+++T L +L+A
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKM-RQECG-QPNEITYLSILKA 228
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C L++G+KIH +I + G+ S + + +L+ MY KCGS+ A +F M E++V+SW
Sbjct: 229 CCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISW 288
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ MI GLA G G++A F MQR G P+ T+ +L+A + G + E + + +
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL-EWVKEVHSHAV 347
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ G+ ++ +V + ++G +D A + M + D W ++G H
Sbjct: 348 NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM-TERDIFSWTVMIGGLAQH 399
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
R + G D + + +LQ C + +++H I + G + + N L+ +Y +CG
Sbjct: 109 RVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGR 168
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
L A +VF + +K++ W+ MI G A GH DA+ + M++ P++ T+ +L A
Sbjct: 169 LQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKA 228
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
C + G + + G ++ +V++ + G ++ A QLI V+ +
Sbjct: 229 CCCPVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDA-QLIFDKMVERNVI 286
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVKELR 359
W ++G H G+ ++++ + S YV +LN +S G E VKE+
Sbjct: 287 SWTVMIGGL---AHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVH 343
Query: 360 EFMNEKGL 367
GL
Sbjct: 344 SHAVNAGL 351
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 10/246 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + F F +M ++ I + + C +L ++H + G
Sbjct: 696 MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAG 755
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D ++ L+ +Y+ +A +FD++ +RD +W V+I ++ R +AL F
Sbjct: 756 LVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFV 815
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS---EHGYGSKMNLCNSLIAM 177
+ E G KP+ + + VL AC+H G ++ G + +++S ++G M ++ +
Sbjct: 816 KMKSE--GFKPNGYSYVAVLTACSHAGLVDEGRR--QFLSMTQDYGIEPTMEHYTCMVDL 871
Query: 178 YSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+ G L A MP E D W A++ A +G + F A +R + P +
Sbjct: 872 LGRAGLLEEAELFILNMPIEPDDAPWGALLG--ACVTYGNLEMAEFAAKERLKLKPKSAS 929
Query: 237 FTGVLS 242
+LS
Sbjct: 930 TYVLLS 935
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 286/509 (56%), Gaps = 9/509 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPT---NPFACSFAIKCCMKFCSLMGGLQIHARVL 57
MV Y PEE L+ M +R+P N F S A+ + G +IH ++
Sbjct: 190 MVTGYVKKDQPEEALVLYSLM--QRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIV 247
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
R G D L ++LMD+Y EA +FD+I +D V+W +I Y ++ R R+
Sbjct: 248 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFS 307
Query: 118 LFDNLNREESGC-KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF L C +P++ T VL ACA L E G ++H Y++ G+ +SLI
Sbjct: 308 LFSELI---GSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLID 364
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY+KCG++ A V G P+ D+VS +++I G A NG +A++ F + ++G PD T
Sbjct: 365 MYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVT 424
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F VLSAC+H GLV++G+ F +++ + HY C+VDLL R+G +Q +++ M
Sbjct: 425 FVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEM 484
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
+KP +W ++LG C + ++ L E + L +++ + YV + N+Y++ G WE+
Sbjct: 485 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 544
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
++R+ M E G+ PG S +K H F+ D SHP N+I + L E+ K++K GYV
Sbjct: 545 KMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVP 604
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
+ LH++ E+K L YHSEKLA+AF +L+T GT I+V KNLR CVDCH+ K +S
Sbjct: 605 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFIS 664
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ R++ IRD RFH F G+CSC DYW
Sbjct: 665 KITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 49/339 (14%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA LFDE+P+RD+ +W +++ Y++ + +AL L+ + R + KP+ T + A
Sbjct: 171 EARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS-KPNIFTVSSAVAA 229
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
A + + G++IH +I G S L +SL+ MY KCG + A +F + +KDVVSW
Sbjct: 230 AAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSW 289
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
++MI + R+ F + + P++ TF+GVL+AC+ + G M++
Sbjct: 290 TSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTR 349
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQA--------------------------------- 289
G P ++D+ + G ++ A
Sbjct: 350 -VGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALK 408
Query: 290 -YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE-----SGDYVLLL 343
+ L+ G KPD + +L AC H L E+ +E + + S Y L+
Sbjct: 409 YFDLLLKSGTKPDHVTFVNVLSAC---THAGLVEKGLEFFYSITEKHDLTHTSDHYTCLV 465
Query: 344 NLYSSVGDWEKVKELREFMNEKGLQ-----TTPGCSTIG 377
+L + G +E++K + M K + GCST G
Sbjct: 466 DLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYG 504
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
KP T ++Q C+ ALE G+K+H +I G+ + + N ++ MY+KCGSL A +
Sbjct: 84 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARK 143
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF MPE+DV SW+ M++G A G +A F M D ++T +++
Sbjct: 144 VFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPER----DSYSWTAMVTGYVKKDQ 199
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWR 306
+E ++ M + PNI V + + ++ I G+ D +W
Sbjct: 200 PEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWS 259
Query: 307 TLL 309
+L+
Sbjct: 260 SLM 262
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 288/506 (56%), Gaps = 4/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + E LF K++ K + +P ++ C S +IH V +
Sbjct: 421 IIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD 480
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
D L ++++Y A + F+ I +D V+W +I+C + N +AL LF
Sbjct: 481 LA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFY 539
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+L +++ +PD + + L A A+L +L+ G++IH ++ G+ + + +SL+ MY+
Sbjct: 540 SL--KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYAC 597
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG++ + ++F + ++D++ W++MI+ M+G G +AI F M V PD TF +
Sbjct: 598 CGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLAL 657
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL+ EG F + M + + P HY C+VDLL R+ L++AYQ + SM +KP
Sbjct: 658 LYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKP 717
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
S +W LLGAC IH + LGE + L++ + SG Y L+ N++++ G W V+E+R
Sbjct: 718 SSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRL 777
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEIT 419
M GL+ PGCS I + +H F+ D SHP+ ++IY L + K L K GY+A+
Sbjct: 778 RMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTK 837
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
HN+ EEK L HSE+LA+ +G+L TP GT+IR+ KNLRIC DCH F K+ S V
Sbjct: 838 FVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVS 897
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
R +++RD RFHHF G CSC D+W
Sbjct: 898 QRALVVRDANRFHHFERGLCSCGDFW 923
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 28/367 (7%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M++ + +N + A++ + G+ IH L+ + D + L+
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALI 290
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
+Y+ + +A ++F + RD V+WN L+S ++N+ RDAL F ++ + S KPD
Sbjct: 291 AMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDM--QNSAQKPD 348
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKC---GSLGMAFE 189
V+ L ++ A G L G+++H Y +G S M + N+LI MY+KC +G AFE
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
M EKD++SW+ +I+G A N +AI F +Q G+ D VL ACS
Sbjct: 409 C---MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS---- 461
Query: 250 VDEGMMFLDRMSKDFGI-----LPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
G+ + + + G L +I +V++ G G D A + S+ K D
Sbjct: 462 ---GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSK-DIVS 517
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQ----ESGDYVLLLNLYSSVGDWEKVKELRE 360
W +++ C H L +E LK +S + L+ +++ +K KE+
Sbjct: 518 WTSMITCC---VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 361 FMNEKGL 367
F+ KG
Sbjct: 575 FLIRKGF 581
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 12/322 (3%)
Query: 32 ACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI 91
A S + C+ +L G Q+HAR+L+ L + L T L+ +Y +A K+FDE+
Sbjct: 48 AHSLLLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEM 105
Query: 92 PQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEF 151
+R WN ++ ++ + + +A+ L+ + G D T VL+AC LG
Sbjct: 106 TERTIFTWNAMMGAFVSSGKYLEAIELYKEM--RVLGVAIDACTFPSVLKACGALGESRL 163
Query: 152 GEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG--MPEKDVVSWSAMISGL 209
G +IH + G+G + +CN+LIAMY KCG LG A +F G M ++D VSW+++IS
Sbjct: 164 GAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
G +A+ F MQ GV + TF L V GM K +
Sbjct: 224 VTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKS-NHFAD 282
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
++ ++ + + G ++ A ++ SM + D W TLL ++ L + +
Sbjct: 283 VYVANALIAMYAKCGRMEDAERVFASMLCR-DYVSWNTLLSGLVQNE---LYRDALNYFR 338
Query: 330 ELK-AQESGDYVLLLNLYSSVG 350
+++ + + D V +LNL ++ G
Sbjct: 339 DMQNSAQKPDQVSVLNLIAASG 360
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMG----GLQIHARV 56
M+ A+ S E L+++MR + + AC+F +K C +G G +IH
Sbjct: 116 MMGAFVSSGKYLEAIELYKEMRVLGVAID--ACTFP--SVLKACGALGESRLGAEIHGVA 171
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEI--PQRDTVAWNVLISCYIRNQRTRD 114
++ G+ + L+ +Y A LFD I + DTV+WN +IS ++ + +
Sbjct: 172 VKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLE 231
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL LF + +E G + T + LQ ++ G IH + + + + + N+L
Sbjct: 232 ALSLFRRM--QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
IAMY+KCG + A VF M +D VSW+ ++SGL N RDA+ F MQ + PD
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349
Query: 235 QTFTGVLSACSHCG 248
+ +++A G
Sbjct: 350 VSVLNLIAASGRSG 363
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 138 LVLQACAHLGALEFGEKIH-RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L+L C + AL G+++H R + H L L+ MY KCGSL A +VF M E
Sbjct: 51 LLLDLCVAVKALPQGQQLHARLLKSH---LSAFLATKLLHMYEKCGSLKDAVKVFDEMTE 107
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF 256
+ + +W+AM+ +G +AIE + M+ GV D TF VL AC G G
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 257 LDRMSK----DFGILPN--IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
K +F + N I YG DL G L D M K D+ W +++
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI------MMEKEDTVSWNSIIS 221
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
A HVT G+ + + + QE G + N Y+ V + V++
Sbjct: 222 A-----HVTEGKCLEALSLFRRMQEVG---VASNTYTFVAALQGVED 260
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 278/468 (59%), Gaps = 2/468 (0%)
Query: 38 KCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTV 97
+ C + G Q+HA++L+ D + ++++D+Y FD + R+ V
Sbjct: 232 RLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVV 291
Query: 98 AWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHR 157
+W +I+ Y +N+ +AL LF + E P++ T ++ + A L AL G+++H
Sbjct: 292 SWTSIIAAYFQNEFFEEALNLFSKM--EIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHA 349
Query: 158 YISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
+ G + + N+LI MY K G + A VF M ++++W+A+I+G + +G G++
Sbjct: 350 RAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKE 409
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+ F M G P+ TF GV+ AC+H LVDEG + + + K F I+P + HY C+V
Sbjct: 410 ALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIV 469
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG 337
LL R+G LD+A + S + D WRTLL AC +HKH G ++ E+L++L+ ++ G
Sbjct: 470 GLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVG 529
Query: 338 DYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINE 397
Y+LL N+++ V W+ V E+R+ M E+ ++ PG S + ++ V H F +D+ HP N
Sbjct: 530 TYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANL 589
Query: 398 IYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIR 457
IY+ + ++ +++ GYV +I + LH++ E+K + LSYHSEKLA+A+G++ TP G I
Sbjct: 590 IYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIT 649
Query: 458 VAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V KNLR+C DCH K++S V NR +++RD RFHHF+ G CSC DYW
Sbjct: 650 VIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 166/376 (44%), Gaps = 12/376 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ Y + +P E F LF+KM K I N + + AI C + G Q H L+
Sbjct: 94 LMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGKQCHGYALKS 152
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + + L+ LYS A ++ +P D +N++++ +++ +A+ +
Sbjct: 153 GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVL 212
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G + ++ T + + + CA L + G+++H + + + + +S+I MY
Sbjct: 213 KLIISE--GIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYG 270
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG++ F + ++VVSW+++I+ N +A+ F M+ + P++ T
Sbjct: 271 KCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAV 330
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+ ++ + + G R K G+ N+ ++ + ++G + A + ++M
Sbjct: 331 LFNSAAGLSALCLGDQLHARAEKS-GLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTC- 388
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQ-ESGDYVLLLNLYSSVGDWEKVKEL 358
+ W ++ H H LG+ + ++ A E +YV + + + + V E
Sbjct: 389 CNIITWNAIITG---HSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEG 445
Query: 359 REFMNE--KGLQTTPG 372
+ N K + PG
Sbjct: 446 FYYFNHLMKQFRIVPG 461
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 122/243 (50%), Gaps = 6/243 (2%)
Query: 45 SLMGGLQIHARVLRDGYQL-DSQL--MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNV 101
+L G IHA + + DS++ + +L++LY ++ A KLFD +P+R+ V+W+
Sbjct: 34 NLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSA 93
Query: 102 LISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE 161
L++ Y++N + LF + +++ P++ + +C +E G++ H Y +
Sbjct: 94 LMAGYMQNGNPLEVFELFKKMVVKDN-IFPNEYVIATAISSCDSQMYVE-GKQCHGYALK 151
Query: 162 HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIES 221
G + N+LI +YSKC +G A ++ +P D+ ++ +++GL + H +A++
Sbjct: 152 SGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDV 211
Query: 222 FGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
+ G+ ++ T+ + C+ + G +M K I +++ ++D+ G
Sbjct: 212 LKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKS-DIDCDVYIGSSIIDMYG 270
Query: 282 RAG 284
+ G
Sbjct: 271 KCG 273
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 41/252 (16%)
Query: 139 VLQACAHLGALEFGEKIHRY--ISEHGY-GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+L+ A L+FG IH + I+ H Y SK+N NSLI +Y KC + +A ++F MP
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACS--------- 245
++VVSWSA+++G NG+ + E F M + +FP++ +S+C
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGKQ 144
Query: 246 -HCGLVDEGMMF----------LDRMSKDFG-------ILP--NIHHYGCVVDLLGRAGL 285
H + G+ F L D G +P +I Y VV+ L +
Sbjct: 145 CHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTH 204
Query: 286 LDQAY---QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVL- 341
+ +A +LI S G++ ++ + T+ C K +TLG++V H LK+ D +
Sbjct: 205 MAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQV--HAQMLKSDIDCDVYIG 262
Query: 342 --LLNLYSSVGD 351
++++Y G+
Sbjct: 263 SSIIDMYGKCGN 274
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 288/507 (56%), Gaps = 9/507 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV A + + +E +LF +M+ + + + F + + C+ +L G IHA V G
Sbjct: 609 MVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIG 668
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + L+++YS EA F+ + RD V+WN++ + Y + ++A+ LF
Sbjct: 669 LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFR 728
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
++ E G KPD +T L + G+ H +E G S +++ L+ +Y+K
Sbjct: 729 HMQLE--GVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAK 786
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG L A +F+G + VV +A+I LA +G +A++ F MQ+ GV PD T +
Sbjct: 787 CGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
+SAC H G+V+EG M + FGI P + HY C VDLLGRAG L+ A Q+I M +
Sbjct: 847 ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
++ +W +LLG C++ LGER + ++EL S +V+L N+Y + G W+ R+
Sbjct: 907 NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+ ++ ++ PG S + + VHEFV D SHP+ +EIY +LD++ ++ AGY A+
Sbjct: 967 KLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEAD--- 1023
Query: 421 ELHNLGAEE--KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
L AE+ K AL YHSE++AIAFG++ATPP TT+++ KNLR+C DCH K +S +
Sbjct: 1024 --KGLDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMI 1081
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD LRFHHF G CSC D W
Sbjct: 1082 MGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 18/327 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ A + S + F LF M + N + + C L G IHA +
Sbjct: 97 LISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWEL 156
Query: 60 GYQLDSQLMT----TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR-TRD 114
G + +S T ++++Y+ +A +F IP++D V+W + Y + +R D
Sbjct: 157 GLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPD 216
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL +F + + P+ +T + L AC +L G +H + E G G N+L
Sbjct: 217 ALRIFREMLLQP--LAPNVITFITALGACT---SLRDGTWLHSLLHEAGLGFDPLAGNAL 271
Query: 175 IAMYSKCGSLGMAFEVFKGMP---EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
I MY KCG A+ VFK M E D+VSW+AMIS G DA+ F ++ G+
Sbjct: 272 INMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMR 331
Query: 232 PDDQTFTGVLSACSHCGLVDEGMM--FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
P+ T +L+A + G VD G F R+ + G L ++ ++ + + G A
Sbjct: 332 PNSVTLITILNALAASG-VDFGAARKFHGRIWES-GYLRDVVVGNAIISMYAKCGFFSAA 389
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHK 316
+ + + K D W T+LGA K
Sbjct: 390 WTVFRRIRWKCDVISWNTMLGASEDRK 416
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 21/310 (6%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
+ +F +M + + N A+ C SL G +H+ + G D L+
Sbjct: 216 DALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALI 272
Query: 73 DLYST---FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
++Y +E ++ K + D V+WN +IS + R DA+ +F L E G
Sbjct: 273 NMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLE--GM 330
Query: 130 KPDDVTCLLVLQACAHLGALEFG--EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+P+ VT + +L A A G ++FG K H I E GY + + N++I+MY+KCG A
Sbjct: 331 RPNSVTLITILNALAASG-VDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAA 389
Query: 188 FEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
+ VF+ + K DV+SW+ M+ + +F M AG+ P+ +F +L+ACS+
Sbjct: 390 WTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449
Query: 247 CGLVDEGM----MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
+D G + L R +D+ + ++ +V + G+ G + +A + M + S
Sbjct: 450 SEALDFGRKIHSLILTR-RRDY-VESSVATM--LVSMYGKCGSIAEAELVFKEMPLPSRS 505
Query: 303 TI-WRTLLGA 311
+ W +LGA
Sbjct: 506 LVTWNVMLGA 515
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 12/282 (4%)
Query: 37 IKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT 96
++ C+ L G + H + G + L L+++Y EA +F ++ +R+
Sbjct: 32 LQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNV 91
Query: 97 VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH 156
V+W LIS ++ A LF + E S P+ T + +L ACA+ L G IH
Sbjct: 92 VSWTALISANAQSGAFARAFALFRTMLLESSAA-PNSYTLVAMLNACANSRDLAIGRSIH 150
Query: 157 RYISEHGYGSKMNLC----NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMN 212
I E G + N++I MY+KCGS A VF +PEKDVVSW+AM A
Sbjct: 151 AMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQE 210
Query: 213 GHG-RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIH 271
DA+ F M + P+ TF L AC+ + +G +L + + G+ +
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG-TWLHSLLHEAGLGFDPL 266
Query: 272 HYGCVVDLLGRAGLLDQAYQLITSMGVKP--DSTIWRTLLGA 311
++++ G+ G + AY + +M + D W ++ A
Sbjct: 267 AGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL-RDGYQLDSQLMTTLMDLYS 76
F M I N + + C +L G +IH+ +L R ++S + T L+ +Y
Sbjct: 425 FHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYG 484
Query: 77 TFEKSFEACKLFDE--IPQRDTVAWNVLISCYIRNQRTRDAL-CLFDNLNREESGCKPDD 133
EA +F E +P R V WNV++ Y +N R+++A L + L + G PD
Sbjct: 485 KCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML---QGGVLPDA 541
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
++ VL +C + + + I E GY S L +LI+M+ +C L A VF
Sbjct: 542 LSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LETALISMHGRCRELEQARSVFDE 597
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC--------- 244
M DVVSW+AM+S A N ++ F MQ GV PD T L C
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG 657
Query: 245 --------------------------SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVD 278
S+CG E + F + M + NI
Sbjct: 658 KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA---- 713
Query: 279 LLGRAGLLDQAYQLITSM---GVKPDSTIWRTLL 309
+AGL +A L M GVKPD + T L
Sbjct: 714 -YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTL 746
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 115/281 (40%), Gaps = 51/281 (18%)
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
LC R + + T LL Q+C L G++ H I+ G + L N LI
Sbjct: 10 LCSLSGAVRVDRAADLQEYTALL--QSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLI 67
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDD 234
MY +CGSL A +F M E++VVSW+A+IS A +G A F M + P+
Sbjct: 68 NMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNS 127
Query: 235 QTFTGVLSACSHC-----GLVDEGMMF---LDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
T +L+AC++ G M++ L+R S ++ N ++++ + G
Sbjct: 128 YTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGN-----AMINMYAKCGSP 182
Query: 287 DQAYQLITSMGVKPDSTIWRTLLG-----------ACRIHKHV---TLGERVIEHLIELK 332
+ A + ++ K D W + G A RI + + L VI + L
Sbjct: 183 EDAIAVFLTIPEK-DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALG 241
Query: 333 AQES---GDYV-----------------LLLNLYSSVGDWE 353
A S G ++ L+N+Y GDWE
Sbjct: 242 ACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWE 282
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/455 (40%), Positives = 267/455 (58%), Gaps = 5/455 (1%)
Query: 54 ARVL---RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
ARVL G LD TT++ +A ++FD +P R+ V+WN +IS Y++
Sbjct: 150 ARVLFRTSGGGALDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKAD 209
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNL 170
R DAL +FD + G + + L AC GAL G +I+R++ + G L
Sbjct: 210 RFLDALEVFDEMR--ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKL 267
Query: 171 CNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
+++ MY KCG + A+ VF +P + + +W+ MI G A++G DA+E F M+ AGV
Sbjct: 268 ATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGV 327
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PDD T VL+AC+H G V EG +L+ + GI P HYGC+VDL GRAG LD+A
Sbjct: 328 APDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAK 387
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
++I M + PD + LLGAC+IH V LGE + +I+L SG YVLL NL + G
Sbjct: 388 KVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAG 447
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
W++V ++R M+E+ + G S I + G EF ++ HP+ EIY M ++ +++
Sbjct: 448 RWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIR 507
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
GYV + LH++ E+K AL HSEKLAIAFG+L P T+R+ KNLR+C DCH
Sbjct: 508 AEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHE 567
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S V+ RE+++RDR RFHHF++G CSC DYW
Sbjct: 568 ATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + + +F++MR + N F + A+ C +L G +I+ V + G
Sbjct: 201 MISGYVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSG 260
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++D++L T ++D+Y EA +FD +P R WN +I + + R DAL LF
Sbjct: 261 IEVDAKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFH 320
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEK-IHRYISEHGYGSKMNLCNSLIAMYS 179
+ E +G PDDVT L VL ACAH G + G + ++ +S HG K ++ ++
Sbjct: 321 QM--EAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFG 378
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G L A +V MP + D+ A++ ++G
Sbjct: 379 RAGQLDEAKKVIDEMPMDPDLAVLGALLGACKIHG 413
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/496 (37%), Positives = 284/496 (57%), Gaps = 9/496 (1%)
Query: 13 EGFYLFEKMRQ--KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
E LF+ M + + + PF C I C + G+Q+H +++ G+ + + +
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTC--VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSAS 265
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ Y+ ++ ++ K+FDE W L+S Y N++ DAL +F + R +
Sbjct: 266 LITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR--NSIL 323
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
P+ T L +C+ LG L++G+++H + G + + NSL+ MYS G++ A V
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 191 FKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
F + +K +VSW+++I G A +G G+ A FG M R PD+ TFTG+LSACSHCG +
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 251 DEGMMFLDRMSKDFG-ILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
++G MS I I HY C+VD+LGR G L +A +LI M VKP+ +W LL
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Query: 310 GACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQT 369
ACR+H V GE+ + L ++ S YVLL N+Y+S G W V +LR M + G+
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMK 563
Query: 370 TPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE 429
PG S + ++G HEF D P + IY+ L+ + ++LK GY + S LH++ E+
Sbjct: 564 KPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQ 621
Query: 430 KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRL 489
K L YHSE+LAIAFG++ T G+ + V KNLR+C DCH K++SGV RE+++RD +
Sbjct: 622 KEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPI 681
Query: 490 RFHHFREGRCSCNDYW 505
RFHHF+ G CSC DYW
Sbjct: 682 RFHHFKNGTCSCGDYW 697
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 149/309 (48%), Gaps = 12/309 (3%)
Query: 61 YQL---DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
YQ+ D+ +++ Y F K +A KLF ++P ++ ++W +I +N+R+ +AL
Sbjct: 152 YQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALD 211
Query: 118 LFDNLNR--EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
LF N+ R +S +P TC V+ ACA+ A G ++H I + G+ + + SLI
Sbjct: 212 LFKNMLRCCIKSTSRP--FTC--VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI 267
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ 235
Y+ C +G + +VF + V W+A++SG ++N DA+ F M R + P+
Sbjct: 268 TFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
Query: 236 TFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
TF L++CS G +D G + ++ G+ + +V + +G ++ A +
Sbjct: 328 TFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 296 MGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL-KAQESGDYVLLLNLYSSVGDWEK 354
+ K W +++ C H + +I L K + + LL+ S G EK
Sbjct: 387 I-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 355 VKELREFMN 363
++L +M+
Sbjct: 446 GRKLFYYMS 454
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L T ++ Y+ + +A LFDE+P RD V+WN +IS + A+ LFD +
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
V+ ++ C G ++ E++ + + NS++ Y + G +
Sbjct: 128 V------VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA----WNSMVHGYLQFGKVDD 177
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS- 245
A ++FK MP K+V+SW+ MI GL N +A++ F M R + + FT V++AC+
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 246 ----HCGLVDEGMM 255
H G+ G++
Sbjct: 238 APAFHMGIQVHGLI 251
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C HL + E R + ++L +I Y++ L A +F MP +DVVSW
Sbjct: 43 CNHLLSRRIDEA--REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
++MISG G A++ F M V ++T +++ C G VD+ +M
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVV----SWTAMVNGCFRSGKVDQAERLFYQMP- 155
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
+ + + +V + G +D A +L M K + W T++
Sbjct: 156 ----VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK-NVISWTTMI 197
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 277/492 (56%), Gaps = 37/492 (7%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDT------------ 96
G Q+H V++ G +LD+ + T L+D+Y ++ E ++FDE D
Sbjct: 175 GEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSR 234
Query: 97 -----------------------VAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
V+W +++C ++N R +A+ LF + E G +P+
Sbjct: 235 NAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE--GIEPNS 292
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
VT VL A A++ AL G H + G+ + + ++L+ MY+KCG + A +F+
Sbjct: 293 VTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEA 352
Query: 194 MPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
MP ++VVSW+AMI G AM+G +A+ F +MQ + PD TFT VL ACS G +EG
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEG 412
Query: 254 MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACR 313
+ + M GI P + HY C+V LLGRAG LD AY +I M +PD IW +LLG+CR
Sbjct: 413 RSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCR 472
Query: 314 IHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGC 373
+H +V L E E+L +L+ + +G+YVLL N+Y+S W+ V LR+ M GL+ GC
Sbjct: 473 VHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGC 532
Query: 374 STIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNA 433
S I +K VH + D SHP + I + L + +++ G+ LH++ +EK +
Sbjct: 533 SWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDI 592
Query: 434 LSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHH 493
LS HSEKLA+A G+++T GT ++V KNLRIC DCH K +S RE+ +RD RFHH
Sbjct: 593 LSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHH 652
Query: 494 FREGRCSCNDYW 505
F++G+CSC DYW
Sbjct: 653 FKDGKCSCADYW 664
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 4/204 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E LF +M+ + I N + +LM G H LR G+ D + + L+
Sbjct: 275 EAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALV 334
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ + +A +F+ +P R+ V+WN +I Y + +A+ LF ++ + S KPD
Sbjct: 335 DMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSM--QSSKEKPD 392
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
VT VL AC+ G E G + +HG +M ++ + + G L A+++
Sbjct: 393 LVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDII 452
Query: 192 KGMP-EKDVVSWSAMISGLAMNGH 214
MP E D W +++ ++G+
Sbjct: 453 NQMPFEPDGCIWGSLLGSCRVHGN 476
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 152/418 (36%), Gaps = 87/418 (20%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+R P +P A+K C +L +HA G D+ + ++L+ Y F
Sbjct: 14 LRHVSFPPDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGA 70
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYI--------------------------------- 107
+ +A + D +P R V W+ LI+ +
Sbjct: 71 TADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSG 130
Query: 108 --RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYG 165
R+ R RDA+ ++ E G PD L A +G + GE++H Y+ + G
Sbjct: 131 LNRSGRARDAVLALVRMHGE--GFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCR 188
Query: 166 SKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNG------------ 213
+ +LI MY KCG VF DV S +A+++GL+ N
Sbjct: 189 LDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREF 248
Query: 214 ---------------------HGRD--AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLV 250
+GRD A++ F MQ G+ P+ T VL A ++ +
Sbjct: 249 VGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAAL 308
Query: 251 DEGMMFLDRMSKDFGILPNIHH----YGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWR 306
G R + F + HH +VD+ + G + A + +M + + W
Sbjct: 309 MHG-----RSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWN 362
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
++G +H R+ + ++E D V + + +E R + NE
Sbjct: 363 AMIGGYAMHGEAENAVRLFRSM--QSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNE 418
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 278/505 (55%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A++ + +E + KM+ + + N + + + C L G +H ++L +G
Sbjct: 292 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 351
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y++ T L+DLY+++ EA LFD+I RD W VLI Y + L L+
Sbjct: 352 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYR 411
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + + V+ ACA LGA + H I G S L SL+ MYS+
Sbjct: 412 EM-KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSR 470
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G+L A +VF M +D ++W+ +I+G A +G A+ + M+ G P + TF V
Sbjct: 471 WGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVV 530
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL ++G + D+ + PNI HY C++DLL RAG L A +LI +M V+P
Sbjct: 531 LYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEP 590
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ W +LLGA RIHK V + +L + YVLL N+++ G+ + +R
Sbjct: 591 NDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRN 650
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ G S I + +HEF V D SHPR EI+ L ++ ++K AGYV E
Sbjct: 651 TMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEE 710
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++G +EK L HSEKLAIAFG++AT PGTT+R+ LRIC DCH+ K +S +
Sbjct: 711 VLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIAR 770
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G+CSC DYW
Sbjct: 771 REIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 11/320 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL-RD 59
M+ AY+ + L+++M + NP + + C +L G IH+R+
Sbjct: 95 MLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G +LD L +L+ +Y+ +A +LF+ + R +WN +I+ Y ++ +A+ L+
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
++++ E P T VL AC++LG L+ G KIH IS G ++L N+L+ MY+
Sbjct: 212 EDMDVE-----PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA 266
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
+C L A ++F+ +P +DVVSWSAMI+ A +AIE + MQ GV P+ TF
Sbjct: 267 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 326
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
VL AC+ G + G D++ + G + + +VDL G LD+A L + +
Sbjct: 327 VLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR 385
Query: 300 PDSTIWRTLLGACRIHKHVT 319
D +W L+G H T
Sbjct: 386 -DEGLWTVLIGGYSKQGHRT 404
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 148/311 (47%), Gaps = 53/311 (17%)
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FD I +++ +W +++ Y +N R AL L+ ++ +P+ V VL ACA +
Sbjct: 81 FDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD-----LQPNPVVYTTVLGACASIK 135
Query: 148 ALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
ALE G+ IH IS G + L NSL+ MY+KCGSL A +F+ M + V SW+AMI
Sbjct: 136 ALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMI 195
Query: 207 SGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF---------- 256
+ A +GH +AI + M V P +TFT VLSACS+ GL+D+G
Sbjct: 196 AAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTE 252
Query: 257 ------------------LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITSM 296
LD +K F LP ++ + ++ L D+A + + M
Sbjct: 253 LDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKM 312
Query: 297 ---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN------LYS 347
GV+P+ + ++L AC + G V + ++ +G + L+N LY+
Sbjct: 313 QLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQIL-----GNGYKITLVNGTALVDLYT 367
Query: 348 SVGDWEKVKEL 358
S G ++ + L
Sbjct: 368 SYGSLDEARSL 378
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
LE +IH IS + + L N ++ Y KCGS+ A F + K+ SW +M++
Sbjct: 40 LESVRQIHDRIS-GAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTA 98
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
A NGH R A++ + +R + P+ +T VL AC+ ++EG R+S G+
Sbjct: 99 YAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKL 155
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
++ ++ + + G L+ A +L M + S+ W ++ A H R+ E +
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSS-WNAMIAAYAQSGHFEEAIRLYEDM 214
Query: 329 -IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
+E + + +L+ S++G ++ +++ ++ +G +
Sbjct: 215 DVEPSVRT---FTSVLSACSNLGLLDQGRKIHALISSRGTE 252
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 278/505 (55%), Gaps = 1/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ A++ + +E + KM+ + + N + + + C L G +H ++L +G
Sbjct: 293 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 352
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y++ T L+DLY+++ EA LFD+I RD W VLI Y + L L+
Sbjct: 353 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYR 412
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + + + V+ ACA LGA + H I G S L SL+ MYS+
Sbjct: 413 EM-KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSR 471
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G+L A +VF M +D ++W+ +I+G A +G A+ + M+ G P + TF V
Sbjct: 472 WGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVV 531
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L ACSH GL ++G + D+ + PNI HY C++DLL RAG L A +LI +M V+P
Sbjct: 532 LYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEP 591
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
+ W +LLGA RIHK V + +L + YVLL N+++ G+ + +R
Sbjct: 592 NDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRN 651
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M +G++ G S I + +HEF V D SHPR EI+ L ++ ++K AGYV E
Sbjct: 652 TMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEE 711
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++G +EK L HSEKLAIAFG++AT PGTT+R+ LRIC DCH+ K +S +
Sbjct: 712 VLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIAR 771
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+I+RD RFH FR+G+CSC DYW
Sbjct: 772 REIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 164/321 (51%), Gaps = 12/321 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVL-RD 59
M+ AY+ + L+++M + NP + + C +L G IH+R+
Sbjct: 95 MLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTK 151
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVA-WNVLISCYIRNQRTRDALCL 118
G +LD L +L+ +Y+ +A +LF+ + R +V+ WN +I+ Y ++ +A+ L
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRL 211
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+++++ E P T VL AC++LG L+ G KIH IS G ++L N+L+ MY
Sbjct: 212 YEDMDVE-----PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 266
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
++C L A ++F+ +P +DVVSWSAMI+ A +AIE + MQ GV P+ TF
Sbjct: 267 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 326
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
VL AC+ G + G D++ + G + + +VDL G LD+A L +
Sbjct: 327 SVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQIEN 385
Query: 299 KPDSTIWRTLLGACRIHKHVT 319
+ D +W L+G H T
Sbjct: 386 R-DEGLWTVLIGGYSKQGHRT 405
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 54/312 (17%)
Query: 88 FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 147
FD I +++ +W +++ Y +N R AL L+ ++ +P+ V VL ACA +
Sbjct: 81 FDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD-----LQPNPVVYTTVLGACASIE 135
Query: 148 ALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAM 205
ALE G+ IH IS G + L NSL+ MY+KCGSL A +F+ M + V SW+AM
Sbjct: 136 ALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAM 195
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF--------- 256
I+ A +GH +AI + M V P +TFT VLSACS+ GL+D+G
Sbjct: 196 IAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT 252
Query: 257 -------------------LDRMSKDFGILP--NIHHYGCVVDLLGRAGLLDQAYQLITS 295
LD +K F LP ++ + ++ L D+A + +
Sbjct: 253 ELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSK 312
Query: 296 M---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN------LY 346
M GV+P+ + ++L AC + G V + ++ +G + L+N LY
Sbjct: 313 MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQIL-----GNGYKITLVNGTALVDLY 367
Query: 347 SSVGDWEKVKEL 358
+S G ++ + L
Sbjct: 368 TSYGSLDEARSL 379
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
LE +IH IS + + L N ++ Y KCGS+ A F + K+ SW +M++
Sbjct: 40 LESVRQIHDRIS-GAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTA 98
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
A NGH R A++ + +R + P+ +T VL AC+ ++EG R+S G+
Sbjct: 99 YAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKL 155
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
++ ++ + + G L+ A +L M + + W ++ A H R+ E +
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
Query: 329 -IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ 368
+E + + +L+ S++G ++ +++ ++ +G +
Sbjct: 216 DVEPSVRT---FTSVLSACSNLGLLDQGRKIHALISSRGTE 253
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 192/458 (41%), Positives = 271/458 (59%), Gaps = 6/458 (1%)
Query: 51 QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRN 109
QIHA +L+ + D+ + L+ Y + ++F + +R D V+WN +IS YI N
Sbjct: 327 QIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHN 386
Query: 110 QRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN 169
+ A+ L + + G + D T VL ACA + LE G ++H S +
Sbjct: 387 ELLCKAMDLVWLM--MQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVV 444
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ ++L+ MYSKCG + A F MP +++ SW++MISG A +GHG +A+ F M+ +G
Sbjct: 445 IGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSG 504
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
PD TF GVLSACSH GLVDEG + M++ +G++P + HY C+VDLLGRAG LD+
Sbjct: 505 QLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKI 564
Query: 290 YQLITSMGVKPDSTIWRTLLGAC--RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
I M +KP+ IWRT+LGAC + LG R E L + Q + +YVLL N+Y+
Sbjct: 565 ENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYA 624
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
S G WE + R M E ++ GCS + +K VH FV D SHP IY L E++K
Sbjct: 625 SGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDK 684
Query: 408 QLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
+++ AGYV +I L++L E K LSYHSEKLA+AF VL G IR+ KNLR+C D
Sbjct: 685 KIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGD 743
Query: 468 CHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
CH+ K +S V +R +++RD RFHHF +G+CSC DYW
Sbjct: 744 CHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 7/300 (2%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
H VL+ G+ D L TL+++Y A KLFDE+P R+ V W LIS Y +N
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAH-LGALEFGEKIHRYISEHGYG-SKMN 169
DA + + E G P+ ++AC + G ++H Y G +K+
Sbjct: 82 PEDACGVLKEMIFE--GFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVA 139
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAG 229
+ N LI MY+KCG + A VF M +KD VSW++MI+GL N DA++S+ +M++ G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199
Query: 230 VFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQA 289
+ P + LS+C+ G + G K G+ ++ ++ L L +
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIK-LGLDMDVSVSNTLLALYAETSRLAEC 258
Query: 290 YQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSV 349
++ + M ++ D W T++GA ++ E + L ++A S + V +NL ++V
Sbjct: 259 QKVFSWM-LERDQVSWNTVIGAL-ADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATV 316
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 170/398 (42%), Gaps = 45/398 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + E+ + MR+ + + FA A+ C ++ G Q H ++ G
Sbjct: 175 MITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLG 234
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRN-QRTRDALCLF 119
+D + TL+ LY+ + E K+F + +RD V+WN +I + +A+ +F
Sbjct: 235 LDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVF 294
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ R +G P+ VT + +L + L + +IH I ++ + N+L+A Y
Sbjct: 295 LEMMR--AGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYG 352
Query: 180 KCGSLGMAFEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
K G + E+F M E +D VSW++MISG N A++ M + G D TF
Sbjct: 353 KSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFA 412
Query: 239 GVLSACSHCGLVDEGM-----------------------MF-----LDRMSKDFGILP-- 268
VLSAC+ ++ GM M+ +D S+ F ++P
Sbjct: 413 TVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVI 325
N++ + ++ R G D A +L T M G PD + +L AC H+ L +
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSAC---SHIGLVDEGF 529
Query: 326 EHLIELK-----AQESGDYVLLLNLYSSVGDWEKVKEL 358
E+ + Y +++L G+ +K++
Sbjct: 530 EYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENF 567
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLM---GGLQIHARVL 57
++ Y+ + PE+ + ++M + N FA AI+ C + S++ G Q+H +
Sbjct: 72 LISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQE--SMLWRRKGRQVHGYAI 129
Query: 58 RDGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
R G D+++ L+++Y+ A +F + +D+V+WN +I+ +N+ DA
Sbjct: 130 RTGLN-DAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDA 188
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLI 175
+ ++++ + +G P + + L +CA LG + G++ H + G +++ N+L+
Sbjct: 189 VKSYNSMRK--TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLL 246
Query: 176 AMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG-RDAIESFGAMQRAGVFPDD 234
A+Y++ L +VF M E+D VSW+ +I LA +G +AIE F M RAG P+
Sbjct: 247 ALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNR 306
Query: 235 QTFTGVLSACSHCGLVDEG----MMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
TF +L+ S + L KD + N ++ G++G ++
Sbjct: 307 VTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIEN-----ALLACYGKSGEMENCE 361
Query: 291 QLITSMGVKPDSTIWRTLL 309
++ + M + D W +++
Sbjct: 362 EIFSRMSERRDEVSWNSMI 380
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M Q+ + F + + C +L G+++HA +R + D + + L+D+YS +
Sbjct: 399 MMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGR 458
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
A + F+ +P R+ +WN +IS Y R+ +AL LF + + SG PD +T + VL
Sbjct: 459 IDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM--KLSGQLPDHITFVGVL 516
Query: 141 QACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK-D 198
AC+H+G ++ G + + ++E +G ++ + ++ + + G L MP K +
Sbjct: 517 SACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPN 576
Query: 199 VVSWSAMISGLAMNGHGR 216
++ W ++ G G+GR
Sbjct: 577 ILIWRTVL-GACCRGNGR 593
>gi|296085287|emb|CBI29019.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 180/424 (42%), Positives = 256/424 (60%), Gaps = 40/424 (9%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA LF E+P RD V+WN +++CY + + +AL LFD +
Sbjct: 24 EAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM-------------------- 63
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
G + +L+ MY+KCG + +A +VF M KDV++W
Sbjct: 64 -------------------QAVGVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 104
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+ +I+G+A+ GH ++A + F M+ AGV P+D TF +LSACSH G+VDEG LD MS
Sbjct: 105 NTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSS 164
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
+GI P + HYGCV+DLL RAGLL++A +LI +M ++P+ LL CRIH + LGE
Sbjct: 165 SYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLEGCRIHGNFELGE 224
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVV 382
V + LI L+ SG Y+LL N+Y++ W+ +++R M G+ PG S I LKG+V
Sbjct: 225 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 284
Query: 383 HEFVVDDVSHPRINEIYQMLDEINKQLKIA-GYVAEITSELHNLGAEEKGNALSYHSEKL 441
H FV D SHP N+IY+ L+EI+ +LK A GY A+ + L ++ E+K +AL+ HSEKL
Sbjct: 285 HRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNGLLDMEEEDKEHALAVHSEKL 344
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
AIA+G+L IR+ KNLR+C DCH+ K++S VY E+I+RDR RFHHF +G CSC
Sbjct: 345 AIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGGEIIVRDRNRFHHFEDGECSC 404
Query: 502 NDYW 505
D+W
Sbjct: 405 LDFW 408
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ + + EE F LF +M P ++ C C G A L D
Sbjct: 12 MLSGFVKCGNVEEAFGLFSEM-----PCRDVVSWNSMLACYAQC----GKPNEALALFDQ 62
Query: 61 YQ---LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
Q ++S + T L+D+Y+ K A ++F+ + +D +AWN +I+ ++A
Sbjct: 63 MQAVGVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQ 122
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIA 176
LF + +E+G +P+D+T + +L AC+H G ++ G+K+ + S +G K+ +I
Sbjct: 123 LFKEM--KEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVID 180
Query: 177 MYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH 214
+ ++ G L A E+ MP E + + A++ G ++G+
Sbjct: 181 LLARAGLLEEAMELIGTMPMEPNPCALGALLEGCRIHGN 219
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/515 (37%), Positives = 290/515 (56%), Gaps = 22/515 (4%)
Query: 7 MSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ 66
M +P+ LF+ + + + A + A+ C + Q+H+ + G +
Sbjct: 55 MRLNPQLALRLFDHLLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRR 114
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ L+ Y+ +A K+FD + D VAWN L+ Y F +
Sbjct: 115 VCNGLIHAYAVCGSLLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFFVGMQAR- 173
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI--------------SEHGYGSKMNLCN 172
D V+ ++ C G E + R + G + L +
Sbjct: 174 -----DTVSWNTIIAWCVENGEYEEAIAVFREMLASMECLPDRVTLFPGKGIEVEERLSS 228
Query: 173 SLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+LI MYSKC + A VF+ + + +V +W+AM++G NG A+E F M+ G+
Sbjct: 229 ALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALELFARMEITGLV 288
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P+ TF VL+ACSH G V+EGM +RM+K +GI P+I HYGC+VDL RAGL D+A +
Sbjct: 289 PNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEK 348
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
+I M +KPD+ +W+ L+GAC+ H++ LG + LIE + YVLL N+Y+ G+
Sbjct: 349 MIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPNDHAGYVLLSNIYALDGN 408
Query: 352 WEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI 411
W V ++R+ M ++G+Q PG S+I + GV+HEF+ D SH +IY+ML E+ +QLK+
Sbjct: 409 WTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYEMLSEMCQQLKV 468
Query: 412 AGYVAEITSELHNLGAEE-KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
AGYV + + L ++ E+ K ++L+ HSEKLAIAFG+++T PGT IR+AKNLR+C DCHN
Sbjct: 469 AGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKNLRVCGDCHN 528
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K+LS +Y R +I+RD RFHHFREG CSC D+W
Sbjct: 529 AVKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 291/544 (53%), Gaps = 45/544 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ Y+ + + + F +M + + F + + C + G Q+HA +LR
Sbjct: 265 VIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRS 324
Query: 60 GYQLDSQLMTTLMDLYS-----------------------TFEKSFE----------ACK 86
Q+ L+ +Y+ +F E A +
Sbjct: 325 RMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHARE 384
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHL 146
+FD + RD VAW +I Y +N +A+ LF + R SG +P+ T VL CA L
Sbjct: 385 MFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIR--SGPEPNSYTVAAVLSVCASL 442
Query: 147 GALEFGEKIH----RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP-EKDVVS 201
LE+G++IH R + E ++ NS++ MY++ GSL A VF + K+ V+
Sbjct: 443 ACLEYGKQIHCKAIRSLQEQSS----SVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT 498
Query: 202 WSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMS 261
W++MI LA +G G DA+ F M R GV PD TF GVLSAC+H G VDEG + ++
Sbjct: 499 WTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQ 558
Query: 262 KDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLG 321
GI+P + HY C+VDLL RAGL +A + I M V+PD+ W +LL ACR+HK+ L
Sbjct: 559 DKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLA 618
Query: 322 ERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGV 381
E E L+ + SG Y L N+YS+ G W ++ + +K ++ G S +
Sbjct: 619 ELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNR 678
Query: 382 VHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKL 441
VH F DDV HP+ + +Y+ ++ +K AG+V ++ S LH++ E K LS HSEKL
Sbjct: 679 VHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKL 738
Query: 442 AIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSC 501
AIAFG+++TP TT+R+ KNLR+C DCH K +S V +RE+I+RD RFHHF++G CSC
Sbjct: 739 AIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSC 798
Query: 502 NDYW 505
DYW
Sbjct: 799 KDYW 802
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 121/289 (41%), Gaps = 68/289 (23%)
Query: 33 CSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSF-----EACKL 87
C+ ++ C + G IHAR ++ G + L L+ Y+ EA +L
Sbjct: 26 CARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRL 85
Query: 88 FDEIP--QRDTVAWNVLISCYIRNQRTRDALCLFDN---------------LNRE----- 125
FDEIP QR+ WN L+S Y ++ R DA +F LNR
Sbjct: 86 FDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGE 145
Query: 126 ---------ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
G P T VL +CA A G K+H ++ + G S + + NS++
Sbjct: 146 AIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLN 205
Query: 177 MYSKCGS-------------------------------LGMAFEVFKGMPEKDVVSWSAM 205
MY KCG + +A +F+ MP++ +VSW+A+
Sbjct: 206 MYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAV 265
Query: 206 ISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLVDEG 253
I+G NG A+ F M + + PD+ T T VLSAC++ G+V G
Sbjct: 266 IAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIG 314
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 38/169 (22%)
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSL 174
AL L R D C +LQ C G IH + G + LCN+L
Sbjct: 5 ALGLHAGAPRTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNL 64
Query: 175 --------------------------------------IAMYSKCGSLGMAFEVFKGMPE 196
+++Y+K G L A VF MPE
Sbjct: 65 LSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPE 124
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
+D VSW+ M+ GL G +AI+ F M G+ P T T VLS+C+
Sbjct: 125 RDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCA 173
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 285/470 (60%), Gaps = 6/470 (1%)
Query: 40 CMKFCSLMGGL----QIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRD 95
C++ CS + L QIH+R++R G+ + + ++++Y K A ++FD ++
Sbjct: 243 CLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQN 302
Query: 96 TVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKI 155
V ++ Y +++ +AL LF ++ +E P++ T + L + A L L+ G+ +
Sbjct: 303 IVLNTTIMDAYFQDKSFEEALNLFSKMDTKE--VPPNEYTFAISLNSIAELSLLKHGDLL 360
Query: 156 HRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG 215
H + + GY + + + N+L+ MY+K GS+ A + F GM +D+V+W+ MI G + +G G
Sbjct: 361 HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLG 420
Query: 216 RDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
R+ +E+F M AG P+ TF GVL ACSH G V++G+ + +++ K F + P++ HY C
Sbjct: 421 REGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTC 480
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQE 335
+V LL +AG+ A + + ++ D WR LL AC + ++ LG++V E+ I +
Sbjct: 481 IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPND 540
Query: 336 SGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRI 395
SG YVLL N+++ +WE V E+R MN++G++ PG S IG++ H F+ ++ HP I
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEI 600
Query: 396 NEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTT 455
IY + E+ +++ GY ++ H++ E++ + LSYHSEKLA+A+G++ TP +
Sbjct: 601 TLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSP 660
Query: 456 IRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ V KN+RIC DCH+ K++S + R ++IRD RFHHFR+G+CSC DYW
Sbjct: 661 LYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 15/256 (5%)
Query: 37 IKCCMKFCSLMGGLQIHARVL--------RDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
+K C L G IH ++ +D YQ++S L++LY ++ A K+F
Sbjct: 38 LKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINS-----LINLYVKCGETVRARKVF 92
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D +P+R+ V+W ++ Y + + L LF ++ + +P++ +V ++C+ G
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDES-RPNEFVATVVFKSCSSSGR 151
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
+E G++ H + G S + N+L+ MYS C G A V +P D+ +S+ +SG
Sbjct: 152 IEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
G ++ E M + + D+ T+ L CS+ ++ RM + G
Sbjct: 212 YLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVR-LGFNS 270
Query: 269 NIHHYGCVVDLLGRAG 284
+ G ++++ G+ G
Sbjct: 271 EVEASGAIINMYGKCG 286
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 136/310 (43%), Gaps = 5/310 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMR-QKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M++ Y S E LF+ M N F + K C + G Q H L+
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKS 165
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + TL+ +YS + EA ++ D++P D ++ +S Y+ ++ +
Sbjct: 166 GLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVL 225
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ +E+ D++T L L+ C++L L +IH + G+ S++ ++I MY
Sbjct: 226 RRMAKED--LVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYG 283
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG + A VF +++V + ++ + +A+ F M V P++ TF
Sbjct: 284 KCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAI 343
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
L++ + L+ G + + K G ++ +V++ ++G ++ A + + M +
Sbjct: 344 SLNSIAELSLLKHGDLLHGLVLKS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 300 PDSTIWRTLL 309
D W T++
Sbjct: 403 -DIVTWNTMI 411
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
AY S EE LF KM K +P N + + ++ + L G +H VL+ GY+
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRN 371
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
+ L+++Y+ +A K F + RD V WN +I + + R+ L FD +
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRM- 430
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
+G P+ +T + VLQAC+H+G +E G ++ + + + ++ + SK G
Sbjct: 431 -MIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAG 489
Query: 183 SLGMAFEVFKGMP-EKDVVSWSAMISG 208
A + + P E DVV+W A+++
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRALLNA 516
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 139 VLQACAHLGALEFGEKIHRYI---SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
+L+ CA+ L GE IH ++ ++ + NSLI +Y KCG A +VF MP
Sbjct: 37 LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF-----PDDQTFTGVLSACSHCGLV 250
E++VVSW AM+ G +G + ++ F +M VF P++ T V +CS G +
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSM----VFSDESRPNEFVATVVFKSCSSSGRI 152
Query: 251 DEGMMF 256
+EG F
Sbjct: 153 EEGKQF 158
>gi|125595828|gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japonica Group]
Length = 602
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/427 (42%), Positives = 260/427 (60%), Gaps = 8/427 (1%)
Query: 86 KLFDEIPQ--RDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG-CKPDDVTCLLVLQA 142
++F+E+P+ RD V+WN +IS + +N +A+ L+ + E G +PD VT + VL +
Sbjct: 177 QVFEEMPRASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSS 236
Query: 143 CAHLGALEFGEKIHRYISE--HGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
CAH GA G + RY+ + G+ + LCN+LI +++CGSL A E+F MPE+ VV
Sbjct: 237 CAHTGARRVGLDVERYVRDTIPGFRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVV 296
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
SW+ +I G M+G G A++ F M PD G+LSACSH G+ DEG + M
Sbjct: 297 SWTTLIIGYGMHGQGDIAVDLFETMVSEATAPDSVAMVGLLSACSHAGMYDEGRKYFSTM 356
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTL 320
+D+ + P + HY C+VDLLGRAG LD+A +LI SM + D +W LLGAC+IHK+V +
Sbjct: 357 ERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVWGALLGACKIHKNVEM 416
Query: 321 GERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKG 380
GE E ++ L+ G YVL+ N+Y+ G + V ++R M +GL+ PGCS + KG
Sbjct: 417 GEEAFERVVSLEPANVGYYVLMANIYADAGQLDGVAKVRAAMRRRGLRKEPGCSYVEHKG 476
Query: 381 VVHEFVVDDVSHPRINEIYQMLDEINKQL--KIAGYVAEITSELHNLGAEEKGNALSYHS 438
VH F+ DD SHP+ IY+++ E+ + + K G V E +E A + +HS
Sbjct: 477 KVHLFMADDHSHPQARRIYELVVELERMVKEKTGGDVVEERAEKAVAEAAAV-PLVGFHS 535
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLA+AFG+L T G+ I V KNLR+C DCH+F K +S + NR ++RD RFH F G
Sbjct: 536 EKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLKTISELTNRAFLVRDASRFHRFENGA 595
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 596 CSCRDYW 602
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR---IPTNPFACSFAIKCCMKFCSLMGGLQIHARVL 57
++ A++ + E L+ +MR + + + C + GL + R +
Sbjct: 195 VISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGARRVGLDVE-RYV 253
Query: 58 RD---GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRD 114
RD G++ + L L++ ++ +A +LFDE+P+R V+W LI Y + +
Sbjct: 254 RDTIPGFRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVVSWTTLIIGYGMHGQGDI 313
Query: 115 ALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNS 173
A+ LF+ + E + PD V + +L AC+H G + G K + ++ K+
Sbjct: 314 AVDLFETMVSEATA--PDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTC 371
Query: 174 LIAMYSKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGH---GRDAIESFGAMQRAG 229
++ + + G L A E+ MP D W A++ ++ + G +A E +++ A
Sbjct: 372 MVDLLGRAGRLDEARELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPAN 431
Query: 230 V 230
V
Sbjct: 432 V 432
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/495 (39%), Positives = 283/495 (57%), Gaps = 13/495 (2%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E L+ +++ + + F S ++ C L G QIH +V++ +Q D + + L+
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF-DNLNREESGCKP 131
DLY + + F P+ D V W ++S ++N+ AL LF ++L +G KP
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG---AGLKP 418
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T V+ ACA L GE+I + ++ G+ + NS + MY++ G + A F
Sbjct: 419 DLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRF 478
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ M DVVSWSA+IS A +G RDA+ F M A V P++ TF GVL+ACSH GLVD
Sbjct: 479 QEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVD 538
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG+ + + M+KD+G+ P I H CVVDLLGRAG L A I++ D IWR+LL +
Sbjct: 539 EGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLAS 598
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIH+ + G+ V ++EL+ S YV+L N+Y G+ + R+ M ++G++ P
Sbjct: 599 CRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEP 658
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEITSELHNLGAEEK 430
G S I LK VH FV D SHP + IY L+E+ ++ K+A EI+ NL
Sbjct: 659 GLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDTEISKREQNL----- 713
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
++ HSEKLA+A G++ P IRV KNLR+C DCH+ K++S NRE+I+RD +R
Sbjct: 714 ---MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIR 770
Query: 491 FHHFREGRCSCNDYW 505
FHHFR+G CSC DYW
Sbjct: 771 FHHFRDGSCSCADYW 785
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 13/273 (4%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L TL+ Y A +L DE+P+R+ V++N+LI Y R +L R
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR-- 102
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+G D + L AC+ G L G +H G S + + NSL++MYSKCG +G
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF E+D VSW++++SG G + + F M+R G+ + V+ CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 247 CGLVDEGMMFLDRMSK----DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
G +G M + G+ ++ ++D+ + G L +A L S+ +P+
Sbjct: 223 RG---DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNV 278
Query: 303 TIWRTLL-GACRIHKHVTLGERVIEHLIELKAQ 334
++ T++ G CR +G+ V + L ++
Sbjct: 279 VMFNTMIAGFCR--TETVIGKEVASEALTLYSE 309
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 12/320 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS + R+ + + F+ + A+ C + L G +HA + DG
Sbjct: 80 LIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+ +YS + EA ++FD +RD V+WN L+S Y+R + + +F
Sbjct: 140 LSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFA 199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHL--GALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ R G + V++ C+ G ++ E +H + + G S + L +++I MY
Sbjct: 200 MMRR--GGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMY 257
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH------GRDAIESFGAMQRAGVFP 232
+K G+L A +F+ + E +VV ++ MI+G +A+ + +Q G+ P
Sbjct: 258 AKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQP 317
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF+ VL AC+ G ++ G ++ K + + ++DL +G ++ ++
Sbjct: 318 TEFTFSSVLRACNLAGYLEFGKQIHGQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRC 376
Query: 293 ITSMGVKPDSTIWRTLLGAC 312
S K D W ++ C
Sbjct: 377 FRS-SPKHDIVTWTAMVSGC 395
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ LF + + + F S + C G QI + G+ + + +
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSC 461
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ A + F E+ D V+W+ +ISC+ ++ RDAL FD + ++ P
Sbjct: 462 VHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM--VDAKVVP 519
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+++T L VL AC+H G ++ G + + ++ ++G + C ++ + + G L A E
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADA-EA 578
Query: 191 F--KGMPEKDVVSWSAMIS 207
F + D V W ++++
Sbjct: 579 FISNSIFHADPVIWRSLLA 597
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/493 (37%), Positives = 286/493 (58%), Gaps = 5/493 (1%)
Query: 15 FYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQ--LMTTLM 72
F LF +MR+ +PF I+ C + G H ++ + +DS L T+L+
Sbjct: 199 FELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNF-IDSNFFLQTSLV 257
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y A KLF+EI RD V W+ +I+ + RN R +++ +F + + P+
Sbjct: 258 DMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLAD--SVTPN 315
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
VT ++ AC+ LG+L+ G +H Y+ +G + S I MY+KCG + A+ VF
Sbjct: 316 SVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFC 375
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
+PEK+V SWS MI+G M+G +A+ F M+ P+ TF VLSACSH G ++E
Sbjct: 376 QIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEE 435
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G MS+D+GI P HY C+VDLLGRAG +D+A I +M +P ++ W LLGAC
Sbjct: 436 GWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGAC 495
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
RIH+ L E V + L+ L++ +SG YV+L N+Y+ VG WE VK+ R M EKG+ G
Sbjct: 496 RIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVG 555
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGN 432
++I ++ ++ F +D + +I + + + ++++ GYV ++ LH++ E K
Sbjct: 556 FTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQE 615
Query: 433 ALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFH 492
L HSEKLAI FG+L + G IR+ KN+R+C DCH +K +S + R++I+RD RFH
Sbjct: 616 VLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFH 675
Query: 493 HFREGRCSCNDYW 505
H ++G CSC DYW
Sbjct: 676 HVQDGVCSCGDYW 688
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 13/315 (4%)
Query: 8 SSSPEEGFY----LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
S S + FY LF++M ++ + F FA+K C G H+ ++ +
Sbjct: 87 SHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEG 146
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D + LM++Y+ EA K+F+E+P +++V W V+I ++ LF +
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRY-ISEHGYGSKMNLCNSLIAMYSKCG 182
R SG + D ++QAC ++ A + G+ H I ++ S L SL+ MY KCG
Sbjct: 207 R--SGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCG 264
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
L A ++F+ + +DVV WSA+I+G A NG ++I F M V P+ TF ++
Sbjct: 265 FLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVL 324
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
ACS G + +G M ++ G+ ++ +Y +D+ + G + AY++ + P+
Sbjct: 325 ACSSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQI---PEK 380
Query: 303 TI--WRTLLGACRIH 315
+ W T++ +H
Sbjct: 381 NVFSWSTMINGFGMH 395
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 279/494 (56%), Gaps = 5/494 (1%)
Query: 13 EGFYLFEKMRQK-RIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E +F KM + ++ AC A+ C C+ G+QIH +++ GY + + +L
Sbjct: 223 EALVVFHKMLASFKATSSTLAC--ALTACANICTPFIGVQIHGLIVKTGYCFNEYISASL 280
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ Y+ + A +F++ R+ V W L++ Y N R DAL +F + R P
Sbjct: 281 ISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMS--VLP 338
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ + L +C L A++ G ++H + G S + + NSL+ MY+KCG + VF
Sbjct: 339 NQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVF 398
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
M K+VVSW+++I G A +G GR A+ F M R V PD+ T G+LSAC H G++
Sbjct: 399 TRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLT 458
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
+G F K+FGI HY +VDLLGR G L++A LI M K + +W LL +
Sbjct: 459 KGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSS 518
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
H +V + ER + +++L+ S Y LL NLY+S G W +V ++R+ M ++G+ P
Sbjct: 519 SINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQP 578
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKG 431
G S I +KG+ H F+ D SHP +IYQ L+ + +LK GYV + H++ E+K
Sbjct: 579 GSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKE 638
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
LSYHSE+LAI FG+++T G+TI V KNLRIC DCHN K+ S V RE+++RD RF
Sbjct: 639 EMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRF 698
Query: 492 HHFREGRCSCNDYW 505
HHF G CSC DYW
Sbjct: 699 HHFHNGTCSCGDYW 712
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 13/244 (5%)
Query: 66 QLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE 125
L T ++ Y+ + +A KLF E+P +D ++WN ++ ++ A +FD ++
Sbjct: 82 NLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSER 141
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLG 185
+ V+ ++ G +E E + R + + NS++ + G +
Sbjct: 142 ------NVVSWTTIINGLLEFGRVEVAECLFRVMPT----KDVTAWNSMVHGFFSNGRVE 191
Query: 186 MAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A E+F+ MP ++V+SW+++I GL NG +A+ F M A T L+AC+
Sbjct: 192 DAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML-ASFKATSSTLACALTACA 250
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIW 305
+ G+ + K G N + ++ L+D A + V + +W
Sbjct: 251 NICTPFIGVQIHGLIVKT-GYCFNEYISASLISFYANCKLIDNASSIFND-NVSRNVVVW 308
Query: 306 RTLL 309
LL
Sbjct: 309 TALL 312
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 42/246 (17%)
Query: 46 LMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF--DEIPQRDTVAWNVLI 103
++G + ++L +QL ++ T L S C LF ++ T N L+
Sbjct: 5 IVGAKLLTTKILPFSFQLSVSIVRTTSSLISYI------C-LFGTKKLSILTTPPSNYLL 57
Query: 104 SCYIRNQRTRDALCLFDNLN------------------REESGCK-------PDDVTCLL 138
S ++RN R +A LF+ ++ R E K D ++
Sbjct: 58 SFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNS 117
Query: 139 VLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
+L+ C G L + +SE S + N L+ G + +A +F+ MP KD
Sbjct: 118 MLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEF----GRVEVAECLFRVMPTKD 173
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
V +W++M+ G NG DAIE F M V ++T V+ H G E ++
Sbjct: 174 VTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVI----SWTSVIGGLDHNGRSFEALVVFH 229
Query: 259 RMSKDF 264
+M F
Sbjct: 230 KMLASF 235
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 278/490 (56%), Gaps = 33/490 (6%)
Query: 49 GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIR 108
G Q+H ++ G + D+ ++T L+D+Y ++ E ++FDE D + N LI+ R
Sbjct: 176 GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSR 235
Query: 109 NQRTRDALCLFDNL---------------------------------NREESGCKPDDVT 135
N + +AL LF + G +P+ VT
Sbjct: 236 NAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVT 295
Query: 136 CLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMP 195
VL A A++ AL G H + G+ + + ++L+ MY+KCG + A +F M
Sbjct: 296 IPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMV 355
Query: 196 EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMM 255
++VVSW+AMI G AM G +A+ F +M + PD TFT +L+AC+ GL +EG
Sbjct: 356 SRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRH 415
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
+ M ++G+ P + HY C+V LLGRAG LD+AY LI+ M +PD+ IW +LLG+CR+H
Sbjct: 416 YFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVH 475
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCST 375
+V L E E L L+ + +G+YVLL N+Y+S W++V +RE M + GL+ GCS
Sbjct: 476 GNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSW 535
Query: 376 IGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALS 435
I +K VH + D SHP + I + ++++N Q++ G+V LH++ +EK + L+
Sbjct: 536 IEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILA 595
Query: 436 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFR 495
HSEKLA+A G+++T PGTT+RV KNLRIC DCH K +S RE+ +RD RFHHF
Sbjct: 596 VHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFS 655
Query: 496 EGRCSCNDYW 505
G+CSC D+W
Sbjct: 656 GGKCSCGDFW 665
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E F +M+ + N + +LM G H LR G+ D + + L+
Sbjct: 276 EAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALV 335
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
D+Y+ + +A +FD + R+ V+WN +I Y +A+ +F ++ + + KPD
Sbjct: 336 DMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQ--KPD 393
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
VT +L AC G E G + + +E+G +M ++ + + G L A+++
Sbjct: 394 MVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLI 453
Query: 192 KGMP-EKDVVSWSAMISGLAMNGH 214
MP E D W +++ ++G+
Sbjct: 454 SDMPFEPDAYIWGSLLGSCRVHGN 477
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 43/304 (14%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
+R P +P A K C +L +HA G D + ++L+ Y
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 81 SFEACKLFDEIP--QRDTVAWNVLISCYI------------------------------- 107
+ A LFD +P QR V W+ L++ +
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127
Query: 108 -----RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH 162
R+ R RDA+ ++ E +PD L A +G + G+++H Y +
Sbjct: 128 VSGLNRSGRARDAVVALATMH-GEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKA 186
Query: 163 GYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESF 222
G + + +LI MY KCG VF DV S +A+I+GL+ N +A+ F
Sbjct: 187 GCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLF 246
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
GV + ++T +++ C G E + F M G PN CV+
Sbjct: 247 KEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQ-GTEPNSVTIPCVLPAFAN 305
Query: 283 AGLL 286
L
Sbjct: 306 VAAL 309
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 9/185 (4%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
PD ++C L +H G + +SL+ Y + G+ G A +
Sbjct: 18 PDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARAL 74
Query: 191 FKGM--PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR-AGVFPDDQTFTGVLSACSHC 247
F GM P++ VV WSA+++ A G A M+R GV P+ T+ G++S +
Sbjct: 75 FDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRS 134
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTI 304
G + ++ L M + + P+ C + +G GL+ QL G + D+ +
Sbjct: 135 GRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACV 194
Query: 305 WRTLL 309
L+
Sbjct: 195 VTALI 199
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 255/404 (63%), Gaps = 2/404 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A ++FDE+P RD ++W+ L+ Y++ + AL +F N+ E G +P+ + L A
Sbjct: 232 AREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM--VEQGVRPNQAAVVTALSAA 289
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG LE G+ +H + G MN+ +L+ MY+KCG + +A EVF GM +DV +W+
Sbjct: 290 ARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWN 349
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI GLA +G GRDA+E F G+ P + TF GVL+ CS GLV EG + + +
Sbjct: 350 AMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEK 409
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
+ I P + HYGC+VDLLGRAGL+ +A +LI M + PD +W T+L +C+ H V LG
Sbjct: 410 YRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVS 469
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
V LIEL SG YVLL +Y+ W++V+E+R+ M+ +G + G S + G VH
Sbjct: 470 VGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVH 529
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
+F+V D H +IY LD INK+L AGYV +++S LH++G EEK +A+ HSE+LAI
Sbjct: 530 KFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSERLAI 589
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
A+G + G+ IR+ KNLR+C DCH F+K+++ V+ RE+I+RD
Sbjct: 590 AYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRD 633
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
+V Y E +F M ++ + N A A+ + L G +H V R G
Sbjct: 250 LVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSG 309
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + L+D+Y+ A ++FD + +RD AWN +I + RDA+ LF+
Sbjct: 310 MPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFE 369
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISE-HGYGSKMNLCNSLIAMYS 179
E G P +VT + VL C+ G + G + + I E + +M ++ +
Sbjct: 370 RFISE--GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLG 427
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNG 213
+ G + A E+ +GM D V W ++S +G
Sbjct: 428 RAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHG 462
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N ++A Y + G + +A EVF MP +D +SWS ++ G A+ F M GV
Sbjct: 217 NEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVR 276
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P+ LSA + GL++ G F+ + + G+ ++ +VD+ + G + A +
Sbjct: 277 PNQAAVVTALSAAARLGLLEHG-KFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVARE 335
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIE 326
+ M + D W ++ C + H LG +E
Sbjct: 336 VFDGMR-RRDVFAWNAMI--CGLAAH-GLGRDAVE 366
>gi|195609728|gb|ACG26694.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 551
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 268/451 (59%), Gaps = 12/451 (2%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
+ +L+ Y++ + A +F +P R V+WN + N AL LF + R+
Sbjct: 101 VANSLVHFYASCGRPGAALAVFRRVPDRSLVSWNTAVDALAGNGDHLAALDLFREMQRDR 160
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYISEHGYGSKMN----LCNSLIAMY 178
PD T VL ACA GAL G H R + G+ S ++ + NSL+ +Y
Sbjct: 161 PDLAPDAYTVQSVLGACAATGALSLGLYAHALLLRELGGAGHASPVSRDVLINNSLVDLY 220
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA-GVFPDDQTF 237
KCG++ +A +VF M E+D+ SW+AM+ LA +G +D+++ F M R G+ P+ TF
Sbjct: 221 GKCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMTRVEGLVPNAITF 280
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VLSAC+H GLVDEG + M D GI P I HYGC+VD+L RAG +++A ++ M
Sbjct: 281 VAVLSACNHGGLVDEGRRYFAAMVSDHGIRPRIEHYGCMVDILARAGFIEEALDVVAGMN 340
Query: 298 VKPDSTIWRTLLGAC-RIHKHVTLGERVIEHLIELKAQE-SGDYVLLLNLYSSVGDWEKV 355
+PDS IWR+LL AC + + + L E + + +++ SG YVLL +Y+S W V
Sbjct: 341 CRPDSIIWRSLLDACCKRNAGLELSEAMAKLALDVPDDAVSGVYVLLSRVYASAQRWNDV 400
Query: 356 KELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYV 415
+R+ M+++G + PG S+I + G VH+FV D SHP+ EIY LDEI ++L AGY
Sbjct: 401 GMIRQLMSQEGFKKEPGFSSIEMDGSVHQFVAGDTSHPQSEEIYVKLDEIQQRLTSAGYK 460
Query: 416 AEITSELHNLGAEE-KGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 474
+++ + KG L HSE+LAI+FG+L PG IR+ KNLR+C DCH +K+
Sbjct: 461 PDLSEAPMVADIDRTKGATLRLHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKL 520
Query: 475 LSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S +YN E+I+RDR+RFHHF++G CSC DYW
Sbjct: 521 ISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 551
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 288/515 (55%), Gaps = 44/515 (8%)
Query: 29 NPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLM-------------------- 68
+ F + + C L G Q+H+ +LR G SQ+M
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538
Query: 69 -------------TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDA 115
T L++ Y + +A ++FD + RD +AW +I Y +N + +A
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598
Query: 116 LCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIH----RYISEHGYGSKMNLC 171
+ LF ++ G +P+ T VL ACA L L++G++IH R + E +++
Sbjct: 599 MELFRSMIL--IGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQ----SVSVS 652
Query: 172 NSLIAMYSKCGSLGMAFEVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGV 230
N++I +Y++ GS+ +A VF + K+ ++W++MI +A +G G A+ F M R GV
Sbjct: 653 NAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGV 712
Query: 231 FPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAY 290
PD T+ GVLSAC+H G VD+G + ++M + GI+P + HY C+VDL RAGLL +A+
Sbjct: 713 KPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAH 772
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVG 350
+ I M V PD+ +W +LL ACR+ K+ L E L+ + SG Y L N+YS+ G
Sbjct: 773 EFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACG 832
Query: 351 DWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLK 410
W + + +KG++ G S ++G VH F DDV HP+ + IY+ E+ +++K
Sbjct: 833 RWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIK 892
Query: 411 IAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 470
AG+V ++ S LH++ E K LS HSEKLAIAFG+++TP TT+R+ KNLR+C DCH
Sbjct: 893 KAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHT 952
Query: 471 FAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K +S +RE+I+RD RFHHFR+G CSC DYW
Sbjct: 953 AIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 10/299 (3%)
Query: 70 TLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGC 129
+L+ LY+ + +A +F E+P RD V+W ++I R+ R DA+ F ++ E G
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSE--GF 343
Query: 130 KPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
P T VL +CA + A G K+H ++ + G S + + NS++ MY KCG A
Sbjct: 344 APSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARA 403
Query: 190 VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGL 249
VF+ M + V SW+ M+S G A+ F M + ++ +++ + GL
Sbjct: 404 VFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIV----SWNTIIAGYNQNGL 459
Query: 250 VDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL---ITSMGVKPDSTIWR 306
+ F RM + P+ V+ +L Q+ I G+ S I
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 307 TLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEK 365
L+ V R+++ + + + LL Y +GD ++ +E+ + MN +
Sbjct: 520 ALISTYAKSGSVETARRIMDQAV-VADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 122/270 (45%), Gaps = 9/270 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y + +E LF M N + + C L G QIH + +R
Sbjct: 585 MIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL 644
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRNQRTRDALCLF 119
+ + ++ +Y+ A ++FD+I R +T+ W +I ++ A+ LF
Sbjct: 645 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLF 704
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMY 178
+ + R G KPD +T + VL ACAH G ++ G++ + + +EHG +M+ ++ ++
Sbjct: 705 EEMVR--VGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLH 762
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQ-T 236
++ G L A E + MP D V W ++++ + + + A + + P +
Sbjct: 763 ARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNAD--LAELAAGKLLSIDPHNSGA 820
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGI 266
++ + + S CG ++ ++ KD G+
Sbjct: 821 YSALANVYSACGRWNDAARIW-KLRKDKGV 849
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
NSL+++Y+K G L A VF MP++D VSW+ MI GL +G DA+++F M G
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 232 PDDQTFTGVLSACS---HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
P T T VLS+C+ CG+ + F+ ++ G+ + V+ + G+ G +
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKL----GLSSCVPVANSVLYMYGKCGDAET 400
Query: 289 AYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
A + M V+ S+ W ++ + L + E+++E
Sbjct: 401 ARAVFERMQVRSVSS-WNVMVSLYTHQGRMELAVSMFENMVE 441
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/417 (43%), Positives = 259/417 (62%), Gaps = 2/417 (0%)
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGA 148
D ++ V WN +IS Y+ N R D L LF + E G +P+ L C+ L A
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM--LEEGIRPNSSGLSSALLGCSELSA 299
Query: 149 LEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISG 208
L+ G +IH+ +S+ + + SLI+MY KCG LG A+++F+ M +KDVV+W+AMISG
Sbjct: 300 LQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILP 268
A +G+ A+ F M + PD TF VL AC+H GLV+ GM + + M +D+ + P
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL 328
HY C+VDLLGRAG L++A +LI SM +P + ++ TLLGACR+HK+V L E E L
Sbjct: 420 QPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKL 479
Query: 329 IELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVD 388
++L +Q + YV L N+Y+S WE V +R+ M E + PG S I ++ VH F
Sbjct: 480 LQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSS 539
Query: 389 DVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVL 448
D HP ++ I++ L E+ K++K+AGY E+ LHN+ E+K L +HSEKLA+AFG +
Sbjct: 540 DRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCI 599
Query: 449 ATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
P G+ I+V KNLRIC DCH K +S + RE+I+RD RFHHF++G CSC DYW
Sbjct: 600 KLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 134/333 (40%), Gaps = 53/333 (15%)
Query: 16 YLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQI-HARVLRDGYQLDSQLMTTLMDL 74
YL + Q +I F + I C++ + G L++ H ++ +S L+ D
Sbjct: 51 YLTKPSDQDQI----FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDP 106
Query: 75 YSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
+ EA +LFDEIP+ DT ++N+++SCY+RN A FD + + D
Sbjct: 107 ----SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK------DAA 156
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
+ ++ A G +E ++ + E S N++I+ Y +CG L A FK
Sbjct: 157 SWNTMITGYARRGEMEKARELFYSMMEKNEVS----WNAMISGYIECGDLEKASHFFKVA 212
Query: 195 P--------------------------------EKDVVSWSAMISGLAMNGHGRDAIESF 222
P K++V+W+AMISG N D ++ F
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 223 GAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGR 282
AM G+ P+ + L CS + G +SK + ++ ++ + +
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCK 331
Query: 283 AGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
G L A++L M K D W ++ H
Sbjct: 332 CGELGDAWKLFEVMK-KKDVVAWNAMISGYAQH 363
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 295/536 (55%), Gaps = 33/536 (6%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS ++ + L+E+M+ + + C +L G IH + +G
Sbjct: 188 MIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNG 247
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP---------------------------- 92
+++ S + T+L+++Y+ A +++D++P
Sbjct: 248 FRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFD 307
Query: 93 ---QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGAL 149
++D V W+ +IS Y + + +AL LF+ + R PD +T L V+ ACA++GAL
Sbjct: 308 RMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRR--IVPDQITMLSVISACANVGAL 365
Query: 150 EFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGL 209
+ IH Y ++G+G + + N+LI MY+KCG+L A EVF+ MP K+V+SWS+MI+
Sbjct: 366 VQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAF 425
Query: 210 AMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPN 269
AM+G AI F M+ + P+ TF GVL ACSH GLV+EG F M + I P
Sbjct: 426 AMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQ 485
Query: 270 IHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLI 329
HYGC+VDL RA L +A +LI +M P+ IW +L+ AC+ H + LGE L+
Sbjct: 486 REHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLL 545
Query: 330 ELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDD 389
EL+ G V+L N+Y+ W+ V +R+ M KG+ CS I + VH F++ D
Sbjct: 546 ELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMAD 605
Query: 390 VSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLA 449
H + +EIY+ LD + QLK+ GY + L +L EEK + +HSEKLA+ +G++
Sbjct: 606 RYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIG 665
Query: 450 TPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+ IR+ KNLRIC DCH+F K++S V+ E+++RDR RFHHF G CSC DYW
Sbjct: 666 ERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 180/367 (49%), Gaps = 42/367 (11%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++R +S +PE L+ +R+ P + F+ +K K +L GL+IH + G
Sbjct: 86 LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFG 145
Query: 61 Y-QLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ D + + L+ +Y+ + +A LFD++ RD V WN++I Y +N L L+
Sbjct: 146 FFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLY 205
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ + + SG +PD + VL ACAH G L +G+ IH++I ++G+ ++ SL+ MY+
Sbjct: 206 EEM--KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 180 KCGSLGMAFEVFKGMP-------------------------------EKDVVSWSAMISG 208
CG++ +A EV+ +P EKD+V WSAMISG
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 209 LAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD-FGIL 267
A + +A++ F MQR + PD T V+SAC++ G + + K+ FG
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 268 PNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH----KHVTLGER 323
I++ ++D+ + G L +A ++ +M K + W +++ A +H + L R
Sbjct: 384 LPINN--ALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDADSAIALFHR 440
Query: 324 VIEHLIE 330
+ E IE
Sbjct: 441 MKEQNIE 447
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/454 (40%), Positives = 270/454 (59%), Gaps = 8/454 (1%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+H V++ G++ + TLMD Y+ F + K+FD + + D WN +I+ Y +N
Sbjct: 110 VHGLVIKRGFERCVGVGNTLMDAYAKFGE-MGVAKVFDGMNESDHYFWNSVIAEYAQNGL 168
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
+ +A +F ++ K + V+ GAL+ G+ IH + + + +
Sbjct: 169 SAEAFSVFGDM------VKSGNFRYNAVIMDXGLSGALQLGKCIHHQVIKMDLEDSVFVG 222
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
S++ +Y KC + MA + F M K+V SW+AM++G M+G ++A+E F M R+GV
Sbjct: 223 TSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIRSGVK 282
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P+ TF VL+ACSH G++ EG + +RM +F + P I HY C+VDLLGRAG L Y
Sbjct: 283 PNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCMVDLLGRAGYL-XCYG 341
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
LI M KPD IW +LLGACRIHK+V LGE L EL G YVLL N+Y+ G
Sbjct: 342 LIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCGYYVLLSNIYADAGR 401
Query: 352 WEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKI 411
W++V+ +R M +GL PG S + LKG +H +V D HP+ +IY+ LD+ N +L+
Sbjct: 402 WDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHEKIYEYLDKXNVKLQE 461
Query: 412 AGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNF 471
GY+ LH++ EEKG L HSEKLA+AFG++ + PG+ I + KNLRIC DC+
Sbjct: 462 LGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSIIHIIKNLRICGDCNVV 521
Query: 472 AKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
K++ V NRE+++RD RFHHF+EG CSC DYW
Sbjct: 522 IKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 37/262 (14%)
Query: 87 LFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP-------DDVTCLLV 139
LFDEIP R V+W +I+ ++N R RDA+ +F L EESG D V V
Sbjct: 35 LFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGCV 94
Query: 140 LQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
+ A + LG E +H + + G+ + + N+L+ Y+K G +G+A +VF GM E D
Sbjct: 95 VSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNESDH 153
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD-----DQTFTGVLS--ACSHCGLVD- 251
W+++I+ A NG +A FG M ++G F D +G L C H ++
Sbjct: 154 YFWNSVIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLSGALQLGKCIHHQVIKM 213
Query: 252 --EGMMF----------------LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
E +F + R + D + N+ + +V G G +A ++
Sbjct: 214 DLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIF 273
Query: 294 TSM---GVKPDSTIWRTLLGAC 312
M GVKP+ + ++L AC
Sbjct: 274 YKMIRSGVKPNYITFVSVLAAC 295
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQ----IHARV 56
++ Y+ + E F +F M + + +F + L G LQ IH +V
Sbjct: 159 VIAEYAQNGLSAEAFSVFGDMVK--------SGNFRYNAVIMDXGLSGALQLGKCIHHQV 210
Query: 57 LRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
++ + + T+++D+Y E+ A K FD + ++ +W +++ Y + R ++A+
Sbjct: 211 IKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAM 270
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFG 152
+F + R SG KP+ +T + VL AC+H G L+ G
Sbjct: 271 EIFYKMIR--SGVKPNYITFVSVLAACSHAGMLKEG 304
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 290/506 (57%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + F LF +++ F + + G QIHA+ +
Sbjct: 322 IISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT 381
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+D+Y+ K EA +F + R V W +IS Y++ + L LF+
Sbjct: 382 ADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFN 441
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ D T +L+A A + +L G+++H +I + G+ S + ++L+ +Y+K
Sbjct: 442 KM--RQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAK 499
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A + F+ MP++++VSW+AMIS A NG ++SF M +G+ PD +F GV
Sbjct: 500 CGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 559
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV+EG+ + M++ + + P HY VVD+L R+G ++A +L+ M + P
Sbjct: 560 LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDP 619
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKA-QESGDYVLLLNLYSSVGDWEKVKELR 359
D +W ++L ACRIHK+ L R + L ++ +++ YV + N+Y++ G WE V ++
Sbjct: 620 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 679
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M ++G++ P S + +K H F +D HP+I EI + +D + K ++ GY + +
Sbjct: 680 KAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTS 739
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LHN + K +L YHSE+LAIAF +++TP G+ I V KNLR C+DCH KV+S +
Sbjct: 740 CALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIV 799
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHFR+G CSC D+W
Sbjct: 800 GREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 8/313 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ YS E+ LF +M+ + F + + + ++ G QIH+ V++
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 280
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + + L+D YS + +A KLFDE+P++D V++NV+IS Y + + + A LF
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L K +L + ++ E G +IH S++ + NSL+ MY+K
Sbjct: 341 ELQFTAFDRKQFPFATMLSI--ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 398
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG A +F + + V W+AMIS G + ++ F M++A V D TF +
Sbjct: 399 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 458
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L A + + G + K G + N+ ++D+ + G + A Q M P
Sbjct: 459 LRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM---P 514
Query: 301 DSTI--WRTLLGA 311
D I W ++ A
Sbjct: 515 DRNIVSWNAMISA 527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 19/378 (5%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGG--LQIHARVLR 58
++ YS + +E F LF +M +R T P +F MG Q+ ++++
Sbjct: 120 LIGGYSQLNQFKEAFELFVQM--QRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIK 177
Query: 59 DGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
GY DS+L+ TL+D Y + AC+LF E+P+ D+V++N +I+ Y ++ A+
Sbjct: 178 LGY--DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAV 235
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
LF + + SG KP + T VL A L + G++IH ++ + + + + N+L+
Sbjct: 236 NLF--VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLD 293
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
YSK S+ A ++F MPE+D VS++ +ISG A +G + A + F +Q
Sbjct: 294 FYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP 353
Query: 237 FTGVLSACSHCGLVDEGMMFLDR---MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
F +LS S+ + G + + D IL +VD+ + G ++A +
Sbjct: 354 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG----NSLVDMYAKCGKFEEAEMIF 409
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA-QESGDYVLLLNLYSSVGDW 352
T++ + + W ++ A G ++ + + + + LL +S+
Sbjct: 410 TNLTHR-SAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 468
Query: 353 EKVKELREFMNEKGLQTT 370
K+L F+ + G +
Sbjct: 469 SLGKQLHSFIIKSGFMSN 486
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA KLFD + +R V W +LI Y + + ++A LF + R G +PD VT + +L
Sbjct: 101 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQR--CGTEPDYVTFVTLLSG 158
Query: 143 CAHLGALEFGEKIHRY---ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
C E G +I + I + GY S++ + N+L+ Y K L +A ++FK MPE D
Sbjct: 159 C---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDS 215
Query: 200 VSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
VS++AMI+G + +G A+ F MQ +G+ P + TF VL C++ GL D
Sbjct: 216 VSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDD 265
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 47/227 (20%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N +I+ Y K G+LG A ++F GM E+ V+W+ +I G + ++A E F MQR G
Sbjct: 87 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD TF +LS C N H G + Q
Sbjct: 147 PDYVTFVTLLSGC------------------------NGHEMG---------NQITQVQT 173
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGD 351
I +G + TL+ + + L ++ + + E+ +S Y ++ YS G
Sbjct: 174 QIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI---DSVSYNAMITGYSKDGL 230
Query: 352 WEKVKELREFMNEKGLQTTPG------CSTIGLKGVV-----HEFVV 387
EK L M GL+ T C+ IGL +V H FV+
Sbjct: 231 DEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVI 277
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 266/438 (60%), Gaps = 3/438 (0%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+L+D Y A +FD + RD VAW +I Y +N DAL LF + RE G
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIRE--G 407
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAF 188
KP++ T VL + L +L+ G+++H S +++ N+LI MYS+ GS+ A
Sbjct: 408 PKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDAR 467
Query: 189 EVFKGM-PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHC 247
++F + +D ++W++MI LA +G G +AIE F M R + PD T+ GVLSAC+H
Sbjct: 468 KIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV 527
Query: 248 GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRT 307
GLV++G + + M I P HY C++DLLGRAGLL++AY I +M ++PD W +
Sbjct: 528 GLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGS 587
Query: 308 LLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGL 367
LL +CR+HK+V L + E L+ + SG Y+ L N S+ G WE ++R+ M +K +
Sbjct: 588 LLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAV 647
Query: 368 QTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGA 427
+ G S + +K VH F V+D HP+ + IY M+ +I K++K G++ + S LH+L
Sbjct: 648 KKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQ 707
Query: 428 EEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRD 487
E K L +HSEKLAIAF ++ TP TT+R+ KNLR+C DCH+ + +S + RE+I+RD
Sbjct: 708 EVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRD 767
Query: 488 RLRFHHFREGRCSCNDYW 505
RFHHF++G CSC DYW
Sbjct: 768 ATRFHHFKDGSCSCQDYW 785
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 27 PTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEAC 85
P++ AC ++ +K G IHAR+++ G + L L L++LY S +A
Sbjct: 9 PSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAH 68
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES------------------ 127
+LFDE+P + T +WN ++S + + A +FD + + +S
Sbjct: 69 RLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKS 128
Query: 128 -----------GCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIA 176
G P T VL +CA AL+ G+K+H ++ + G + + NSL+
Sbjct: 129 AVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLN 188
Query: 177 MYSKCG-------------------------------SLGMAFEVFKGMPEKDVVSWSAM 205
MY+KCG +A +F M + D+VSW+++
Sbjct: 189 MYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSI 248
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVF-PDDQTFTGVLSACSH 246
I+G G+ A+E+F M ++ PD T VLSAC++
Sbjct: 249 ITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACAN 290
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 175/428 (40%), Gaps = 70/428 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y+ + + F +M I F + + C +L G ++H+ V++ G
Sbjct: 116 MIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLG 175
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+++Y+ S A +FD + +DT WN +IS +++ + AL LFD
Sbjct: 176 QSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFD 235
Query: 121 NLNREE------------------------------SGCKPDDVTCLLVLQACAHLGALE 150
+ + S KPD T VL ACA+ +L+
Sbjct: 236 QMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLK 295
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE--------------------- 189
G++IH +I + N+LI+MY+K G++ +A
Sbjct: 296 LGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDG 355
Query: 190 ------------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
+F + +DVV+W+AMI G A NG DA+ F M R G P++ T
Sbjct: 356 YFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTL 415
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VLS S +D G L ++ + ++ ++ + R+G + A ++ +
Sbjct: 416 AAVLSVISSLASLDHGKQ-LHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHIC 474
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE--LKAQESGDYVLLLNLYSSVGDWEKV 355
D+ W +++ + H LG IE L E L+ D++ + + S+ V
Sbjct: 475 SYRDTLTWTSMILSLAQHG---LGNEAIE-LFEKMLRINLKPDHITYVGVLSACTHVGLV 530
Query: 356 KELREFMN 363
++ + + N
Sbjct: 531 EQGKSYFN 538
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N++++ ++K G+L A VF +P+ D VSW+ MI G G + A+ +F M +G+
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 232 PDDQTFTGVLSACSHCGLVDEGMM---FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQ 288
P TFT VL++C+ +D G F+ ++ + G++P + ++++ + G
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQS-GVVPVAN---SLLNMYAKCGDSVM 198
Query: 289 AYQLITSMGVKPDSTIWRTLLG 310
A + M +K D++ W T++
Sbjct: 199 AKVVFDRMRLK-DTSTWNTMIS 219
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 265/449 (59%), Gaps = 5/449 (1%)
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALC 117
G D ++T L+ Y+ + +A ++F E + D +I+ Y + + R
Sbjct: 359 GVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFK 418
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIA 176
L+ E G PD + + L ACA L AL G +IH ++ + + L N++++
Sbjct: 419 LWGAAI--ERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVS 476
Query: 177 MYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
MY +CGSL A + F GMP +D +SW+AM+S A +G D + F AM + G +
Sbjct: 477 MYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVA 536
Query: 237 FTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSM 296
F +LSAC+H GLV+ G M+ D G++P HYGC+VDLLGR G L A+ ++ +M
Sbjct: 537 FLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596
Query: 297 GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVK 356
V PD+ W L+GACRI+ G E ++EL+A + YV L N+YS+ G WE
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAA 656
Query: 357 ELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVA 416
+R+ M + GL+ PG S+I ++ VHEFVV D SHP+ IY L+ + ++ AGY A
Sbjct: 657 AVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRA 716
Query: 417 EITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
LH++ E+K L +HSEKLAIAFG+++TP G+T+RV KNLR+CVDCHN +K +S
Sbjct: 717 VTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFIS 776
Query: 477 GVYNREVIIRDRLRFHHFREGRCSCNDYW 505
V+ RE+++RD RFHHF++G CSC DYW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY LF ++ Q+ I + + C L G IH + G
Sbjct: 99 LISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAG 158
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQR-DTVAWNVLISCYIRNQRTRDALCLF 119
L + + L+ +Y +A LF + + D V WN +I+ +N R+AL +F
Sbjct: 159 LGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIF 218
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGE--KIHRYISEHGYGSKMNLCNSLIAM 177
+ + G PD VT + V +AC+ +L + H + E G GS + + +L+
Sbjct: 219 YRML--QLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNA 276
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
Y++CG + A E F MPE++ VSW++MI+ A GH A+E+F AM GV P T
Sbjct: 277 YARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGH-LLAVETFHAMLLEGVVPTRSTL 335
Query: 238 TGVLSAC 244
L C
Sbjct: 336 FAALEGC 342
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 58 RDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALC 117
RDGY L ++L+ +Y A +F +I + V W VLIS Y+ + A+
Sbjct: 60 RDGY-----LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIA 114
Query: 118 LFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
LF + +E G D + + VL AC+ L G IHR E G G + + ++L++M
Sbjct: 115 LFHRILQE--GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSM 172
Query: 178 YSKCGSLGMAFEVFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
Y +CGSL A +F + DVV W+AMI+ + NG R+A+E F M + G+ PD T
Sbjct: 173 YGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVT 232
Query: 237 FTGVLSACSHC-GLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS 295
F V ACS L + + G+ ++ +V+ R G +D A + +
Sbjct: 233 FVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAA 292
Query: 296 MGVKPDSTIWRTLLGA 311
M + ++ W +++ A
Sbjct: 293 MPER-NAVSWTSMIAA 307
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 282/495 (56%), Gaps = 3/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EEG LF +M + + S+ G QIH ++ G +LD + ++L
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 132
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y K + + +P R+ VAWN LI +N L L+ + + SGC+P
Sbjct: 133 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM--KISGCRP 190
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ +T + VL +C+ L G++IH + G S + + +SLI+MYSKCG LG A + F
Sbjct: 191 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLV 250
++D V WS+MIS +G G +AIE F M ++ + ++ F +L ACSH GL
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ D M + +G P + HY CVVDLLGRAG LDQA +I SM +K D IW+TLL
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC IHK+ + +RV + ++++ +S YVLL N+++S W V E+R+ M +K ++
Sbjct: 371 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
G S KG VH+F + D S + EIY L E+ ++K+ GY + S LH++ EEK
Sbjct: 431 AGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 490
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+ L HSEKLA+AF ++ P G IR+ KNLR+C DCH K +S + NRE+ +RD R
Sbjct: 491 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 550
Query: 491 FHHFREGRCSCNDYW 505
FHHF G+CSC DYW
Sbjct: 551 FHHFINGKCSCGDYW 565
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 14/288 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FDE+P R WN +I+ I+ + + L LF ++ G PD+ T V
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH--GLGFSPDEYTLGSVFSGS 101
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L ++ G++IH Y ++G + + +SL MY + G L V + MP +++V+W+
Sbjct: 102 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWN 161
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+I G A NG + + M+ +G P+ TF VLS+CS + +G K
Sbjct: 162 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK- 220
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G + ++ + + G L A + + D +W +++ A H G+
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQ---GDE 276
Query: 324 VIEHLIELKAQESG---DYVLLLNLY---SSVGDWEKVKELREFMNEK 365
IE L A+++ + V LNL S G +K EL + M EK
Sbjct: 277 AIE-LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
PE YL++ M+ N + C G QIHA ++ G ++++
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 232
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +YS +A K F E D V W+ +IS Y + + +A+ LF+ + E++ +
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM-AEQTNME 291
Query: 131 PDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
++V L +L AC+H G + G E + ++G+ + ++ + + G L A
Sbjct: 292 INEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 351
Query: 190 VFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+ + MP K D+V W ++S ++ + A F + + + P+D
Sbjct: 352 IIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSA 397
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N LI Y + G L A +VF MP++ + +W+AMI+GL + + F M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ T V S + V G K +G+ ++ + + R G L
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK-YGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 292 LITSMGVKPDSTIWRTLL 309
+I SM V+ + W TL+
Sbjct: 148 VIRSMPVR-NLVAWNTLI 164
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 290/506 (57%), Gaps = 3/506 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y+ + F LF +++ F + + G QIHA+ +
Sbjct: 282 IISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT 341
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ + +L+D+Y+ K EA +F + R V W +IS Y++ + L LF+
Sbjct: 342 ADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFN 401
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ ++ D T +L+A A + +L G+++H +I + G+ S + ++L+ +Y+K
Sbjct: 402 KM--RQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAK 459
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A + F+ MP++++VSW+AMIS A NG ++SF M +G+ PD +F GV
Sbjct: 460 CGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 519
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACSH GLV+EG+ + M++ + + P HY VVD+L R+G ++A +L+ M + P
Sbjct: 520 LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDP 579
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKA-QESGDYVLLLNLYSSVGDWEKVKELR 359
D +W ++L ACRIHK+ L R + L ++ +++ YV + N+Y++ G WE V ++
Sbjct: 580 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 639
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ M ++G++ P S + +K H F +D HP+I EI + +D + K ++ GY + +
Sbjct: 640 KAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTS 699
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
LHN + K +L YHSE+LAIAF +++TP G+ I V KNLR C+DCH KV+S +
Sbjct: 700 CALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIV 759
Query: 480 NREVIIRDRLRFHHFREGRCSCNDYW 505
RE+ +RD RFHHFR+G CSC D+W
Sbjct: 760 GREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 14/314 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCC-MKFCSLMGGLQIHARVLRD 59
+V +Y S+ + LF++M + I + FA A+ C + ++ G QIH+ V++
Sbjct: 185 LVDSYCKSNRLDLACQLFKEMPE--IDSFTFA---AVLCANIGLDDIVLGQQIHSFVIKT 239
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
+ + + L+D YS + +A KLFDE+P++D V++NV+IS Y + + + A LF
Sbjct: 240 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L K +L + ++ E G +IH S++ + NSL+ MY+
Sbjct: 300 RELQFTAFDRKQFPFATMLSI--ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 357
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCG A +F + + V W+AMIS G + ++ F M++A V D TF
Sbjct: 358 KCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFAS 417
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L A + + G + K G + N+ ++D+ + G + A Q M
Sbjct: 418 LLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM--- 473
Query: 300 PDSTI--WRTLLGA 311
PD I W ++ A
Sbjct: 474 PDRNIVSWNAMISA 487
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EA KLFD + +R V W +LI Y + + ++A LF + R G +PD VT + +L
Sbjct: 96 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQR--CGTEPDYVTFVTLLSG 153
Query: 143 CAHLGALEFGEKIHRY---ISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDV 199
C E G +I + I + GY S++ + N+L+ Y K L +A ++FK MPE D
Sbjct: 154 C---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDS 210
Query: 200 VSWSAMI 206
+++A++
Sbjct: 211 FTFAAVL 217
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 157/380 (41%), Gaps = 58/380 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGG--LQIHARVLR 58
++ YS + +E F LF +M +R T P +F MG Q+ ++++
Sbjct: 115 LIGGYSQLNQFKEAFELFVQM--QRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIK 172
Query: 59 DGYQLDSQLM--TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDAL 116
GY DS+L+ TL+D Y + AC+LF E+P+ D+ + ++
Sbjct: 173 LGY--DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVL------------- 217
Query: 117 CLFDNLNREESGCKPDDVTCLLVLQACAHLGA--LEFGEKIHRYISEHGYGSKMNLCNSL 174
CA++G + G++IH ++ + + + + N+L
Sbjct: 218 --------------------------CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 251
Query: 175 IAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ YSK S+ A ++F MPE+D VS++ +ISG A +G + A + F +Q
Sbjct: 252 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ 311
Query: 235 QTFTGVLSACSHCGLVDEGMMFLDR---MSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
F +LS S+ + G + + D IL +VD+ + G ++A
Sbjct: 312 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG----NSLVDMYAKCGKFEEAEM 367
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKA-QESGDYVLLLNLYSSVG 350
+ T++ + + W ++ A G ++ + + + + LL +S+
Sbjct: 368 IFTNLTHR-SAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIA 426
Query: 351 DWEKVKELREFMNEKGLQTT 370
K+L F+ + G +
Sbjct: 427 SLSLGKQLHSFIIKSGFMSN 446
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N +I+ Y K G+LG A ++F GM E+ V+W+ +I G + ++A E F MQR G
Sbjct: 82 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 141
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD TF +LS C+ + ++ ++ K G + +VD ++ LD A Q
Sbjct: 142 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIK-LGYDSRLIVGNTLVDSYCKSNRLDLACQ 200
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE 330
L M + DS + +L A + LG+++ +I+
Sbjct: 201 LFKEMP-EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIK 238
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/512 (37%), Positives = 296/512 (57%), Gaps = 9/512 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV AY + L+ +M + + + F + + L+GGLQ HA++++ G
Sbjct: 211 MVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSG 270
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEAC-KLFDEIPQRDTVAWNVLISCY-IRNQRTRDALCL 118
Y +S + + L+DLYS C K+FDEI D V WN +IS Y + + +AL
Sbjct: 271 YHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALEC 330
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS-KMNLCNSLIAM 177
F L + G +PDD + + V+ AC+++ + G ++H + S ++++ N+LIAM
Sbjct: 331 FRQL--QVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAM 388
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTF 237
YSKCG+L A +F MPE + VS+++MI+G A +G G ++ F M G P + TF
Sbjct: 389 YSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITF 448
Query: 238 TGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
VL+AC+H G V++G ++ + M + FGI P H+ C++DLLGRAG L +A +LI ++
Sbjct: 449 ISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIP 508
Query: 298 VKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKE 357
P W LLGACRIH +V L + L++L + YV+L N+YS G +
Sbjct: 509 FDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAAS 568
Query: 358 LREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAE 417
+R+ M ++G++ PGCS I + +H FV +D HP I +I + L+E+ +++K GY E
Sbjct: 569 VRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPE 628
Query: 418 ITSEL----HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
+ S L + E+ L +HSEKLA++FG+++T G I V KNLRICVDCHN K
Sbjct: 629 VRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIK 688
Query: 474 VLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
+S V RE+ +RD RFH F++G+CSC YW
Sbjct: 689 YISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 7/256 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AY+ + F LF +MR+ + + F S I C L+ Q+HA + G
Sbjct: 111 LIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIR--QLHALSVVTG 168
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQ-RDTVAWNVLISCYIRNQRTRDALCLF 119
+ L+ YS EA ++F + + RD V+WN ++ Y++++ AL L+
Sbjct: 169 LDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELY 228
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
L G D T VL A ++ L G + H + + GY ++ + LI +YS
Sbjct: 229 --LEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286
Query: 180 KCGSLGM-AFEVFKGMPEKDVVSWSAMISGLAMNGHGRD-AIESFGAMQRAGVFPDDQTF 237
KCG + +VF + D+V W+ MISG ++ D A+E F +Q G PDD +
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSL 346
Query: 238 TGVLSACSHCGLVDEG 253
V+SACS+ +G
Sbjct: 347 VCVISACSNMSSPSQG 362
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 68 MTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREES 127
TL+ Y+ A +LFDE+PQ D+V++N LI+ Y R T+ A LF L E+
Sbjct: 77 FNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF--LEMREA 134
Query: 128 GCKPDDVTCLLVLQACA-HLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
D T ++ AC ++G + ++H G S +++ N+LI YSK G L
Sbjct: 135 FLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE 191
Query: 187 AFEVFKGMPE-KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS 245
A +F + E +D VSW++M+ + G A+E + M G+ D T VL+A +
Sbjct: 192 ARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFT 251
Query: 246 HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG--LLD--QAYQLITSMGVKPD 301
+ + G+ F ++ K G N H ++DL + G +LD + + I++ PD
Sbjct: 252 NVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN----PD 306
Query: 302 STIWRTLLGACRIHKHVT 319
+W T++ +++ ++
Sbjct: 307 LVLWNTMISGYSLYEDLS 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
LL+ C L A R + +H + + N+LI+ Y+K + +A ++F MP+
Sbjct: 50 LLLYSKCRRLSAA-------RRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ 102
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS-HCGLVDEGMM 255
D VS++ +I+ A G + A + F M+ A + D T +G+++AC + GL+ +
Sbjct: 103 PDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQ--- 159
Query: 256 FLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIH 315
L +S G+ + ++ + G L +A ++ + D W +++ A H
Sbjct: 160 -LHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQH 218
Query: 316 KHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+ G + +E +E+ + G V + L S + + V++L
Sbjct: 219 RE---GSKALELYLEMTVR--GLIVDIFTLASVLTAFTNVQDL 256
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/332 (49%), Positives = 227/332 (68%), Gaps = 3/332 (0%)
Query: 177 MYSKCGSLGMAFEVFK---GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPD 233
MY KCGSL A VF+ G ++DVV+W+AMI+G AM+G R+A+E+FG ++ G++P
Sbjct: 1 MYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPT 60
Query: 234 DQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLI 293
D TF GVL+ACSH GLVDEG L M +++GI+P + HYGC+VDLLGRAG +++A+ L+
Sbjct: 61 DITFIGVLNACSHSGLVDEGRALLAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLV 120
Query: 294 TSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWE 353
SM KPD+ +W +LLGACR+HK++ LG+RV ++L+ SG YVLL N+Y++ G W
Sbjct: 121 RSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVANGLANSGTYVLLSNMYAAAGKWR 180
Query: 354 KVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAG 413
+V +R M G+Q PGCS + + V EFV D SHPR EIY L+E+N + G
Sbjct: 181 EVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARG 240
Query: 414 YVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAK 473
+V LH+L K AL+ HSEKLA+AFG+++TPP T I++ KNLR C DCH K
Sbjct: 241 HVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLK 300
Query: 474 VLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
++S R+++ RDR RFHHF +G CSC DYW
Sbjct: 301 LVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 332
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 83 EACKLFDEIP---QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
EA +F ++ RD VAWN +I+ Y + R+R+AL F L + G P D+T + V
Sbjct: 10 EAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQ--GLWPTDITFIGV 67
Query: 140 LQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEK- 197
L AC+H G ++ G + + E+G K+ ++ + + G + AF++ + M K
Sbjct: 68 LNACSHSGLVDEGRALLAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVRSMKAKP 127
Query: 198 DVVSWSAMI 206
D W++++
Sbjct: 128 DAAMWASLL 136
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 286/505 (56%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
MV + + E +F +MR + + + + + C + G QIHA + R
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTW 308
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
Y+ + + + L+D+YS A +F + R+ ++W +I Y +N + +A+ F
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ + G KPDD T V+ +CA+L +LE G + H G + + N+L+ +Y K
Sbjct: 369 EMQMD--GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F M D VSW+A+++G A G ++ I+ F M G+ PD TF GV
Sbjct: 427 CGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGV 486
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LSACS GLV++G + D M KD I+P HY C++DL R+G +A + I M P
Sbjct: 487 LSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSP 546
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D+ W TLL +CR+ ++ +G+ E+L+E Q YVLL +++++ G W +V LR
Sbjct: 547 DAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRR 606
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M ++ ++ PGCS I K VH F DD SHP + IY+ L+ +N ++ GY +++S
Sbjct: 607 GMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSS 666
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ +K + +S+HSEKLAIAFG++ P IR+ KNLR+CVDCHN K +S +
Sbjct: 667 VLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITG 726
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R++++RD +RFH F +G CSC D+W
Sbjct: 727 RDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 36/341 (10%)
Query: 1 MVRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ +S + SP L+ + R++ + S I G +H +VLR
Sbjct: 116 LITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRL 175
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G+ + + + L+D+Y+ +A ++F E+ + V +N LI+ +R + DA LF
Sbjct: 176 GFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLF 235
Query: 120 DNLNREES-----------------------------GCKPDDVTCLLVLQACAHLGALE 150
+ +S G D T +L AC L A E
Sbjct: 236 QLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASE 295
Query: 151 FGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLA 210
G++IH YI+ Y + + ++L+ MYSKC S+ +A VF+ M ++++SW+AMI G
Sbjct: 296 EGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 211 MNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMF--LDRMSKDFGILP 268
N +A+ +F MQ G+ PDD T V+S+C++ ++EG F L +S G++
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS---GLMR 412
Query: 269 NIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL 309
I +V L G+ G ++ A++L M D W L+
Sbjct: 413 YITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 452
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
+LF +P+RD V++N LI+ + ++ L+ L REES +P +T ++ +
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREES-VRPTRITLSAMIMVASA 158
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV----- 200
L G +H + G+G+ + + L+ MY+K G + A VF+ M K VV
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 201 --------------------------SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+W+ M++GL NG +A++ F M+ GV D
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278
Query: 235 QTFTGVLSACSHCGLVDEG 253
TF +L+AC +EG
Sbjct: 279 YTFGSILTACGALAASEEG 297
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/495 (39%), Positives = 283/495 (57%), Gaps = 13/495 (2%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E L+ +++ + + F S ++ C L G QIH +V++ +Q D + + L+
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF-DNLNREESGCKP 131
DLY + + F P+ D V W ++S ++N+ AL LF ++L +G KP
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG---AGLKP 418
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
D T V+ ACA L GE+I + ++ G+ + NS + MY++ G + A F
Sbjct: 419 DLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRF 478
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVD 251
+ M DVVSWSA+IS A +G RDA+ F M A V P++ TF GVL+ACSH GLVD
Sbjct: 479 QEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVD 538
Query: 252 EGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGA 311
EG+ + + M+KD+G+ P I H CVVDLLGRAG L A I++ D IWR+LL +
Sbjct: 539 EGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLAS 598
Query: 312 CRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTP 371
CRIH+ + G+ V ++EL+ S YV+L N+Y G+ + R+ M ++G++ P
Sbjct: 599 CRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEP 658
Query: 372 GCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQL-KIAGYVAEITSELHNLGAEEK 430
G S I LK VH FV D SHP + IY L+E+ ++ K+A EI+ NL
Sbjct: 659 GLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDTEISKREQNL----- 713
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
++ HSEKLA+A G++ P IRV KNLR+C DCH+ K++S NRE+I+RD +R
Sbjct: 714 ---MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIR 770
Query: 491 FHHFREGRCSCNDYW 505
FHHFR+G CSC DYW
Sbjct: 771 FHHFRDGSCSCADYW 785
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 13/273 (4%)
Query: 67 LMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREE 126
L TL+ Y A +L DE+P+R+ V++N+LI Y R +L R
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR-- 102
Query: 127 SGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGM 186
+G D + L AC+ G L G +H G S + + NSL++MYSKCG +G
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 187 AFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSH 246
A VF E+D VSW++++SG G + + F M+R G+ + V+ CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 247 CGLVDEGMMFLDRMSK----DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
G +G M + G+ ++ ++D+ + G L +A L S+ +P+
Sbjct: 223 RG---DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNV 278
Query: 303 TIWRTLL-GACRIHKHVTLGERVIEHLIELKAQ 334
++ T++ G CR +G+ V + L ++
Sbjct: 279 VMFNTMIAGFCR--TETVIGKEVASEALTLYSE 309
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 12/320 (3%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ AYS + R+ + + F+ + A+ C + L G +HA + DG
Sbjct: 80 LIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDG 139
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ +L+ +YS + EA ++FD +RD V+WN L+S Y+R + + +F
Sbjct: 140 LSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFA 199
Query: 121 NLNREESGCKPDDVTCLLVLQACAHL--GALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
+ R G + V++ C+ G ++ E +H + + G S + L +++I MY
Sbjct: 200 MMRR--GGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMY 257
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH------GRDAIESFGAMQRAGVFP 232
+K G+L A +F+ + E +VV ++ MI+G +A+ + +Q G+ P
Sbjct: 258 AKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQP 317
Query: 233 DDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQL 292
+ TF+ VL AC+ G ++ G ++ K + + ++DL +G ++ ++
Sbjct: 318 TEFTFSSVLRACNLAGYLEFGKQIHGQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRC 376
Query: 293 ITSMGVKPDSTIWRTLLGAC 312
S K D W ++ C
Sbjct: 377 FRS-SPKHDIVTWTAMVSGC 395
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E+ LF + + + F S + C G QI + G+ + + +
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSC 461
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ A + F E+ D V+W+ +ISC+ ++ RDAL FD + ++ P
Sbjct: 462 VHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM--VDAKVVP 519
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+++T L VL AC+H G ++ G + + ++ ++G + C ++ + + G L A E
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADA-EA 578
Query: 191 F--KGMPEKDVVSWSAMIS 207
F G+ D V W ++++
Sbjct: 579 FISNGIFHADPVIWRSLLA 597
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 282/495 (56%), Gaps = 3/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EEG LF +M + + S+ G QIH ++ G +LD + ++L
Sbjct: 71 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 130
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y K + + +P R+ VAWN LI +N L L+ + + SGC+P
Sbjct: 131 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM--KISGCRP 188
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ +T + VL +C+ L G++IH + G S + + +SLI+MYSKCG LG A + F
Sbjct: 189 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 248
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLV 250
++D V WS+MIS +G G +AIE F M ++ + ++ F +L ACSH GL
Sbjct: 249 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 308
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ D M + +G P + HY CVVDLLGRAG LDQA +I SM +K D IW+TLL
Sbjct: 309 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 368
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC IHK+ + +RV + ++++ +S YVLL N+++S W V E+R+ M +K ++
Sbjct: 369 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 428
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
G S KG VH+F + D S + EIY L E+ ++K+ GY + S LH++ EEK
Sbjct: 429 AGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 488
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+ L HSEKLA+AF ++ P G IR+ KNLR+C DCH K +S + NRE+ +RD R
Sbjct: 489 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 548
Query: 491 FHHFREGRCSCNDYW 505
FHHF G+CSC DYW
Sbjct: 549 FHHFINGKCSCGDYW 563
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 14/288 (4%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+FDE+P R WN +I+ I+ + + L LF ++ G PD+ T V
Sbjct: 42 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH--GLGFSPDEYTLGSVFSGS 99
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A L ++ G++IH Y ++G + + +SL MY + G L V + MP +++V+W+
Sbjct: 100 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWN 159
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
+I G A NG + + M+ +G P+ TF VLS+CS + +G K
Sbjct: 160 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK- 218
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
G + ++ + + G L A + + D +W +++ A H G+
Sbjct: 219 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQ---GDE 274
Query: 324 VIEHLIELKAQESG---DYVLLLNLY---SSVGDWEKVKELREFMNEK 365
IE L A+++ + V LNL S G +K EL + M EK
Sbjct: 275 AIE-LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 321
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
PE YL++ M+ N + C G QIHA ++ G ++++
Sbjct: 171 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 230
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +YS +A K F E D V W+ +IS Y + + +A+ LF+ + E++ +
Sbjct: 231 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM-AEQTNME 289
Query: 131 PDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
++V L +L AC+H G + G E + ++G+ + ++ + + G L A
Sbjct: 290 INEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 349
Query: 190 VFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQT 236
+ + MP K D+V W ++S ++ + A F + + + P+D
Sbjct: 350 IIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSA 395
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
N LI Y + G L A +VF MP++ + +W+AMI+GL + + F M G
Sbjct: 27 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 86
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ T V S + V G K +G+ ++ + + R G L
Sbjct: 87 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK-YGLELDLVVNSSLAHMYMRNGKLQDGEI 145
Query: 292 LITSMGVKPDSTIWRTLL 309
+I SM V+ + W TL+
Sbjct: 146 VIRSMPVR-NLVAWNTLI 162
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 279/494 (56%), Gaps = 5/494 (1%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E L+ +++ + + F S I+ C + G QIH +VL+ +Q D + + L+
Sbjct: 307 EALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366
Query: 73 DLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPD 132
DLY + + F +P++D V W +IS ++N+ AL LF L +G KPD
Sbjct: 367 DLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHEL--LGAGLKPD 424
Query: 133 DVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFK 192
T V+ ACA L GE+I + ++ G+G + NS I MY++ G + A F+
Sbjct: 425 PFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQ 484
Query: 193 GMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M D+VSWSA+IS A +G RDA+ F M A V P++ TF GVL+ACSH GLVDE
Sbjct: 485 EMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDE 544
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G+ + + M +++ + P I H CVVDLLGRAG L A I + IWR+LL +C
Sbjct: 545 GLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASC 604
Query: 313 RIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPG 372
RIH+ + G+ V + ++EL+ S YV L N+Y G+ ++R+ M E+G++ PG
Sbjct: 605 RIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPG 664
Query: 373 CSTIGLKGVVHEFVVDDVSHPRINEIYQMLDE-INKQLKIAGYVAEITSELHNLGAEEKG 431
S I L+ VH FV D SHP N IY L E ++K K+ A T + E+
Sbjct: 665 LSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQ-- 722
Query: 432 NALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRF 491
+ +++HSEKLA+A G++ P IRV KNLR+C DCH K++S RE+++RD +RF
Sbjct: 723 SWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRF 782
Query: 492 HHFREGRCSCNDYW 505
HHFR+G CSC DYW
Sbjct: 783 HHFRDGSCSCADYW 796
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 155/327 (47%), Gaps = 25/327 (7%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKR-IPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
++ AYS + PE F + R+ + + F + A+ C + L G +HA + +
Sbjct: 84 LIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLE 143
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + +L+ +Y+ +A ++FD +RD V+WN L+S Y+R D L +F
Sbjct: 144 GIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVF 203
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLG--ALEFGEKIHRYISEHGYGSKMNLCNSLIAM 177
+ R SG + V++ CA ++ +H + + G+ S + L ++++ M
Sbjct: 204 AMMRR--SGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGM 261
Query: 178 YSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHG------RDAIESFGAMQRAGVF 231
Y+K G+L A +FK + + +VV ++AMI+GL + R+A+ + +Q G+
Sbjct: 262 YAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGME 321
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSK------DFGILPNIHHYGCVVDLLGRAGL 285
P + TF+ V+ AC+ G ++ G ++ K DF ++DL +G
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF-------IGSALIDLYLNSGC 374
Query: 286 LDQAYQLITSMGVKPDSTIWRTLLGAC 312
++ ++ TS+ K D W ++ C
Sbjct: 375 MEDGFRCFTSVP-KQDVVTWTAMISGC 400
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 14/288 (4%)
Query: 52 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 111
+HA ++R L TL+ Y A +L DE+P+ + V++N+LI Y R +
Sbjct: 36 VHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93
Query: 112 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 171
+L F R +G + D T L AC+ G L G+ +H G + +
Sbjct: 94 PEASLETFAR-ARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVS 152
Query: 172 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
NSL++MY++CG +G A +VF E+D VSW+A++SG G D + F M+R+G+
Sbjct: 153 NSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIG 212
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSK----DFGILPNIHHYGCVVDLLGRAGLLD 287
+ V+ C+ D+ +M + G ++ +V + + G L
Sbjct: 213 LNSFALGSVIKCCAGS---DDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALS 269
Query: 288 QAYQLITSMGVKPDSTIWRTLL-GACRIHKHVTLGERVIEHLIELKAQ 334
+A L S+ + P+ ++ ++ G CR +G V+ + L ++
Sbjct: 270 EAVALFKSV-LDPNVVVFNAMIAGLCR--DEAAVGTDVLREALSLYSE 314
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
E LF ++ + +PF S + C G QI + G+ + + +
Sbjct: 407 ERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSC 466
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+ +Y+ A + F E+ D V+W+ +IS + ++ RDAL F+ + ++ P
Sbjct: 467 IHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEM--VDAKVVP 524
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMA 187
+++T L VL AC+H G ++ G K + + E+ + C ++ + + G L A
Sbjct: 525 NEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADA 581
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 282/495 (56%), Gaps = 3/495 (0%)
Query: 12 EEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTL 71
EEG LF +M + + S+ G QIH ++ G +LD + ++L
Sbjct: 158 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 217
Query: 72 MDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
+Y K + + +P R+ VAWN LI +N L L+ + + SGC+P
Sbjct: 218 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM--KISGCRP 275
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF 191
+ +T + VL +C+ L G++IH + G S + + +SLI+MYSKCG LG A + F
Sbjct: 276 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 335
Query: 192 KGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACSHCGLV 250
++D V WS+MIS +G G +AIE F M ++ + ++ F +L ACSH GL
Sbjct: 336 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 395
Query: 251 DEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLG 310
D+G+ D M + +G P + HY CVVDLLGRAG LDQA +I SM +K D IW+TLL
Sbjct: 396 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 455
Query: 311 ACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTT 370
AC IHK+ + +RV + ++++ +S YVLL N+++S W V E+R+ M +K ++
Sbjct: 456 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 515
Query: 371 PGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEK 430
G S KG VH+F + D S + EIY L E+ ++K+ GY + S LH++ EEK
Sbjct: 516 AGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 575
Query: 431 GNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLR 490
+ L HSEKLA+AF ++ P G IR+ KNLR+C DCH K +S + NRE+ +RD R
Sbjct: 576 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 635
Query: 491 FHHFREGRCSCNDYW 505
FHHF G+CSC DYW
Sbjct: 636 FHHFINGKCSCGDYW 650
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 164/385 (42%), Gaps = 46/385 (11%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
F++ R I TN + I+ C SL G Q+H ++ G+ D + LM +YS
Sbjct: 33 FQRFRLN-IFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSK 91
Query: 78 F--------------EKSF-----------------EACKLFDEIPQRDTVAWNVLISCY 106
+K++ A K+FDE+P R WN +I+
Sbjct: 92 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 151
Query: 107 IRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGS 166
I+ + + L LF ++ G PD+ T V A L ++ G++IH Y ++G
Sbjct: 152 IQFEFNEEGLSLFREMH--GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 209
Query: 167 KMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQ 226
+ + +SL MY + G L V + MP +++V+W+ +I G A NG + + M+
Sbjct: 210 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 269
Query: 227 RAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLL 286
+G P+ TF VLS+CS + +G K G + ++ + + G L
Sbjct: 270 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCL 328
Query: 287 DQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG---DYVLLL 343
A + + D +W +++ A H G+ IE L A+++ + V L
Sbjct: 329 GDAAKAFSERE-DEDEVMWSSMISAYGFHGQ---GDEAIE-LFNTMAEQTNMEINEVAFL 383
Query: 344 NLY---SSVGDWEKVKELREFMNEK 365
NL S G +K EL + M EK
Sbjct: 384 NLLYACSHSGLKDKGLELFDMMVEK 408
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 11 PEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTT 70
PE YL++ M+ N + C G QIHA ++ G ++++
Sbjct: 258 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 317
Query: 71 LMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCK 130
L+ +YS +A K F E D V W+ +IS Y + + +A+ LF+ + E++ +
Sbjct: 318 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM-AEQTNME 376
Query: 131 PDDVTCLLVLQACAHLGALEFG-EKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE 189
++V L +L AC+H G + G E + ++G+ + ++ + + G L A
Sbjct: 377 INEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 436
Query: 190 VFKGMPEK-DVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDD 234
+ + MP K D+V W ++S ++ + A F + + + P+D
Sbjct: 437 IIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 480
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 262/441 (59%), Gaps = 2/441 (0%)
Query: 48 GGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYI 107
G + + ++ + Y LD +++ Y A +FD +P++D V+W+ +IS Y
Sbjct: 290 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 349
Query: 108 RNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSK 167
+N + L LF + + SG KPD+ T + V+ ACA L ALE G+ +H YI +G
Sbjct: 350 QNDLFDETLALFQEM--QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN 407
Query: 168 MNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
+ L +LI MY KCG + A EVF GM EK + +W+A+I GLAMNG +++ F M++
Sbjct: 408 VILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK 467
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
V P++ TF GVL AC H GLVDEG M D I PN+ HYGC+VDLLGRAG L
Sbjct: 468 CHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQ 527
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+A +L+ M + PD W LLGAC+ H +G RV LIEL+ G +VLL N+Y+
Sbjct: 528 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYA 587
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
S G W+ V E+R M + + PGCS I GV+HEF+ D +HP ++ I ML E+
Sbjct: 588 SKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAM 647
Query: 408 QLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
+LK+ GY +I L ++ EEK + L HSEKLAIAFG++ P T IR+ KNLRIC D
Sbjct: 648 KLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICND 707
Query: 468 CHNFAKVLSGVYNREVIIRDR 488
CH AK++S + R+++ R
Sbjct: 708 CHTAAKLISKAFCRKIVFLFR 728
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 35/258 (13%)
Query: 83 EACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQA 142
EACKLFDE+ ++D V W+ LI+C+ +N+ +A+ F +++ G D+V + L A
Sbjct: 193 EACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK--IGVMVDEVVAVSALSA 250
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFE------------- 189
CA+L + G+ IH + G S +NL N+LI MYSKCG + +A +
Sbjct: 251 CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISW 310
Query: 190 ------------------VFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVF 231
+F MPEKDVVSWS+MISG A N + + F MQ +G
Sbjct: 311 NSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK 370
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
PD+ T V+SAC+ +++G ++ K G+ N+ ++D+ + G ++ A +
Sbjct: 371 PDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 429
Query: 292 LITSMGVKPDSTIWRTLL 309
+ M K ST W L+
Sbjct: 430 VFYGMIEKGIST-WNALI 446
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 47/298 (15%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+RAY ++SP F L++ M + + + I+ C S Q+H VL+ G
Sbjct: 49 MIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLG 108
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + TL++ +S +AC++F+E D+V+WN +++ YI
Sbjct: 109 FDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE------------ 156
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+G +E + I+ + E + NS+I ++
Sbjct: 157 -------------------------IGNVEEAKHIYHQMPERSIIAS----NSMIVLFGM 187
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
G + A ++F M EKD+V+WSA+I+ N +AI +F M + GV D+
Sbjct: 188 RGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSA 247
Query: 241 LSACSHCGLVDEGMMF----LDRMSKDFGILPN--IHHYGCVVDLLGRAGLLDQAYQL 292
LSAC++ +V+ G + L ++ + L N I+ Y D++ L D+AY L
Sbjct: 248 LSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL 305
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Query: 86 KLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAH 145
++F+ I + WN++I YI+ A L+ ++ G D+ T L++QAC+
Sbjct: 33 RIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLG--ADNYTYPLLIQACSI 90
Query: 146 LGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAM 205
+ +++H ++ + G+ S + + N+LI +S C ++ A VF D VSW+++
Sbjct: 91 RRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSI 150
Query: 206 ISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFG 265
++G G+ +A + M + + VL GLV E D M +
Sbjct: 151 LAGYIEIGNVEEAKHIYHQMPERSIIASNSMI--VLFGMR--GLVVEACKLFDEMLE--- 203
Query: 266 ILPNIHHYGCVVDLLGRAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGE 322
++ + ++ + + ++A + M GV D + + L AC V +G+
Sbjct: 204 --KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGK 261
Query: 323 RVIEHLIELKAQESGDYVLLLN----LYSSVGD 351
+ H + LK + Y+ L N +YS GD
Sbjct: 262 LI--HSLSLKIG-TESYINLQNALIYMYSKCGD 291
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 257/443 (58%), Gaps = 5/443 (1%)
Query: 66 QLMTTLMDLYSTFE---KSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNL 122
+ L+D Y+ + A +FDE+P+RD V W L++ R A+ + +
Sbjct: 81 HVANALVDAYARLPCAGGAATARAVFDEMPRRDVVTWTSLLTGLARAGAHAAAVRAYHGM 140
Query: 123 NREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCG 182
+G + D+ VL +CA AL+ G +H G ++ NSL++MY+K G
Sbjct: 141 --VAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAKTG 198
Query: 183 SLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLS 242
+L A VF MP + ++W+A+I G A NG GR ++E + M R+G PD TF G+L
Sbjct: 199 ALHDARAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLF 258
Query: 243 ACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDS 302
ACSH GLVD G M+ D+GI P HY C+VDLLGRAG LD+A L+ + D+
Sbjct: 259 ACSHAGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDA 318
Query: 303 TIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFM 362
T+W++LLGACR+H++ L ER E + L ++ YV+L NLYS W V +R M
Sbjct: 319 TVWKSLLGACRVHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALM 378
Query: 363 NEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSEL 422
+G+ PGCS +G+ GV H F V+D HPR EIY+ ++E+ ++++ GYV + L
Sbjct: 379 KARGITKEPGCSWVGVNGVTHLFHVEDRGHPRAAEIYRKVEEMTERIRAEGYVPDTDWAL 438
Query: 423 HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNRE 482
+ E + L+YHSE+LA+AFG+LA P IRV KNLR+C DCH K+++ Y R
Sbjct: 439 QDEAPEGRERGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKAYGRV 498
Query: 483 VIIRDRLRFHHFREGRCSCNDYW 505
+I+RD FHH ++G CSC DYW
Sbjct: 499 IILRDANCFHHMKDGECSCGDYW 521
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Query: 18 FEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYST 77
+ M + T+ FA + + C +L G +HA + G + +L+ +Y+
Sbjct: 137 YHGMVAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAK 196
Query: 78 FEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCL 137
+A +FD +P R T+ W LI Y +N R R +L ++ ++ R SGC+PD VT +
Sbjct: 197 TGALHDARAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMVR--SGCRPDYVTFI 254
Query: 138 LVLQACAHLGALEFGEKIHRYIS-EHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMP 195
+L AC+H G ++ G R ++ ++G + ++ + + G L A ++ +
Sbjct: 255 GLLFACSHAGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSST 314
Query: 196 EKDVVSWSAMI 206
E D W +++
Sbjct: 315 ELDATVWKSLL 325
>gi|115480819|ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group]
Length = 555
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 277/518 (53%), Gaps = 36/518 (6%)
Query: 2 VRAYSMSSSPEEGFYLFEKM-RQKRIPTNPFACSFAIKCCMKFCSLMG---------GLQ 51
+RA + P L+ M R N + + C + G+
Sbjct: 60 IRALARGPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVA 119
Query: 52 IHARVLRDGYQ-LDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQ 110
+HA + R G + D + +L+ LY+ A ++FD P V
Sbjct: 120 LHASLFRRGLESPDRFIRASLLSLYAAAGDLPAARQVFDLSPPNHYV------------- 166
Query: 111 RTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMN 169
L LF + D VT L +L ACAHLGAL H Y++ + N
Sbjct: 167 ---QVLRLFRTMR------TADHVTLLALLSACAHLGALHTARWAHAYLATTCSFPITTN 217
Query: 170 LCNSLIAMYSKCGSLGMAFEVFKGMP--EKDVVSWSAMISGLAMNGHGRDAIESFGAMQR 227
L +L+ MY +CG + A +F P KDV +W+ MI+GLA+NG DA+ F M+
Sbjct: 218 LATALLNMYMRCGDVQTACSLFHSTPTRHKDVHTWTVMIAGLALNGFSTDALHLFTHMKD 277
Query: 228 AGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLD 287
+ PD T T VLSAC+H G+VDEG L RM D+ + P I HYGC VDLLGRAGLL+
Sbjct: 278 HNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHYGCTVDLLGRAGLLE 337
Query: 288 QAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYS 347
+A LI ++ K D +W LL ACR H++ +G+ V ++ L Q +G +V L N+Y+
Sbjct: 338 EALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAGAWVFLSNVYA 397
Query: 348 SVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINK 407
+ G W+ V+E+R M + + PG S + L GVV+EF+ D SHP+ ++IY MLDEI K
Sbjct: 398 AAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGK 457
Query: 408 QLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVD 467
L + G+ ++ E+K +S HSEKLA+AFG++ T G IR+ KNLRIC D
Sbjct: 458 TLSLKGHKPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICED 517
Query: 468 CHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCNDYW 505
CH+ KV+S VY+R +++RDR RFHHF+ G CSC DYW
Sbjct: 518 CHSVMKVVSEVYDRVIVVRDRNRFHHFKSGSCSCLDYW 555
>gi|413923546|gb|AFW63478.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 489
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/491 (37%), Positives = 289/491 (58%), Gaps = 4/491 (0%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
++ M + + + + FA+K C + +L G Q+ A +++ G+Q D + +L+ Y
Sbjct: 1 MYVDMLEAGVRPDSYTFPFALKACAQLAALQEGRQLQAHIVKLGFQHDEHVQNSLISFYG 60
Query: 77 TFEKSFEACKLFD--EIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDV 134
+ A FD E +R +W+ L++ Y + + L F + + G +PD+
Sbjct: 61 KCVEPAMARLAFDRVEAEERTAASWSALLAAYTKAGLWGECLESFGAMVLD--GWRPDES 118
Query: 135 TCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGM 194
+ + L ACAHLGA + G +H + + + SL+ MY+KCGS+ A VF M
Sbjct: 119 STVSALSACAHLGAFDVGRSLHCALLRNTARLNTIMQTSLVDMYAKCGSIEKAAAVFDAM 178
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGM 254
+K+ ++SAM+SGLA++G GR A++ F AM R PD T+ GVL+ACS GL+++G+
Sbjct: 179 DDKNAWTYSAMLSGLALHGDGRKALQVFDAMVRERHAPDAATYVGVLNACSRAGLLEDGL 238
Query: 255 MFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRI 314
DRM + + PN +YGC+VDL+ RAG LD A LI SM P T WR+LL ACRI
Sbjct: 239 RCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTDTAWRSLLNACRI 298
Query: 315 HKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCS 374
H + L ER ++ L L A +GDYV++ ++++ DW +LR + GL +PG S
Sbjct: 299 HGDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEAVDWGLAQSPGVS 358
Query: 375 TIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNAL 434
+ ++G +H FV D SHPR ++IY+ML ++ QL+ GY + + ++G EEK +
Sbjct: 359 AVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVALDVGEEEKRRVV 418
Query: 435 SYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHF 494
+ HS+KLA+AFG+L+T G +R+ NLR+ +CH ++ ++S ++ RE++IRDR R H F
Sbjct: 419 AAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGREIVIRDRNRLHRF 478
Query: 495 REGRCSCNDYW 505
R G CSC DYW
Sbjct: 479 RRGVCSCRDYW 489
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 290/498 (58%), Gaps = 3/498 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ ++ S+ P +M+ + + F + C K SL G ++H ++R+
Sbjct: 822 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 881
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ D + +++ LY + LFD + + V+WN +I+ Y++N AL +F
Sbjct: 882 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 941
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ G + ++ + V AC+ L +L G + H Y +H + SLI MY+K
Sbjct: 942 QMVL--YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 999
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
GS+ + +VF G+ EK SW+AMI G ++G ++AI+ F MQR G PDD TF GV
Sbjct: 1000 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 1059
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITS-MGVK 299
L+AC+H GL+ EG+ +LD+M FG+ PN+ HY CV+D+LGRAG LD+A +++ M +
Sbjct: 1060 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 1119
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELR 359
D IW++LL +CRIH+++ +GE+V L EL+ ++ +YVLL NLY+ +G WE V+++R
Sbjct: 1120 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 1179
Query: 360 EFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEIT 419
+ MNE L+ GCS I L V FVV + EI + + ++ GY +
Sbjct: 1180 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 1239
Query: 420 SELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVY 479
S H+L EEK L HSEKLA+ +G++ T GTTIRV KNLRICVDCHN AK++S V
Sbjct: 1240 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 1299
Query: 480 NREVIIRDRLRFHHFREG 497
RE+++RD RFHHF+ G
Sbjct: 1300 EREIVVRDNKRFHHFKNG 1317
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 181/438 (41%), Gaps = 72/438 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRI----------------------------PTNPFA 32
++ Y+M SP++ ++F+ +R K + T+
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540
Query: 33 CSFAIKCCMKFCSLMG----GLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLF 88
F C +K C+ M GL +H V++ G D + L+ Y T +A +LF
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600
Query: 89 DEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNRE--ESGCKPDDVTCLLVLQACAHL 146
D +P+R+ V+WN +I + N + ++ L + E + PD T + VL CA
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 147 GALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMI 206
+ G+ +H + + ++ L N+L+ MYSKCG + A +FK K+VVSW+ M+
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 720
Query: 207 SGLAMNGHGRDAIESFGAMQRAG--VFPDDQTFTGVLSACS-----------HCGLVDEG 253
G + G + M G V D+ T + C HC + +
Sbjct: 721 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 780
Query: 254 MMFLDRMSKDF------------------GILP-NIHHYGCVVDLLGRAG----LLDQAY 290
++ + ++ F GI ++ + ++ ++ LD
Sbjct: 781 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 840
Query: 291 QLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIE-LKAQESGDYVLLLNLYSSV 349
Q+ S G+ PDS +LL AC K + LG+ V +I ++ Y+ +L+LY
Sbjct: 841 QMKIS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 899
Query: 350 GDWEKVKELREFMNEKGL 367
G+ V+ L + M +K L
Sbjct: 900 GELCTVQALFDAMEDKSL 917
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 17/290 (5%)
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D L T ++ +Y+ ++ +FD + ++ WN +IS Y RN+ + L F +
Sbjct: 474 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM- 532
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ PD T V++ACA + + G +H + + G + + N+L++ Y G
Sbjct: 533 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 592
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRA---GVF-PDDQTFTG 239
+ A ++F MPE+++VSW++MI + NG ++ G M G F PD T
Sbjct: 593 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652
Query: 240 VLSACSH-----CGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLIT 294
VL C+ G G R+ K+ +L N ++D+ + G + A Q+I
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKEL-VLNN-----ALMDMYSKCGCITNA-QMIF 705
Query: 295 SMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLN 344
M + W T++G V+ ++ D V +LN
Sbjct: 706 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 755
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 56/309 (18%)
Query: 138 LVLQACAHLGALEFGEKIHRYISEHGYGSKMN---LCNSLIAMYSKCGSLGMAFEVFKGM 194
L+LQA +E G KIH+ +S G N LC +I MY+ CGS + VF +
Sbjct: 444 LLLQASGKRKDIEMGRKIHQLVS--GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501
Query: 195 PEKDVVSWSAMISGLAMNGHGRDAIESFGAM-QRAGVFPDDQTFTGVLSACS-------- 245
K++ W+A+IS + N + +E+F M + PD T+ V+ AC+
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 561
Query: 246 --------HCGLVDEGMM------------FLDRMSKDFGILP--NIHHYGCVVDLLGRA 283
GLV++ + F+ + F I+P N+ + ++ +
Sbjct: 562 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 621
Query: 284 GLLDQAYQLITSM-------GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQES 336
G ++++ L+ M PD T+L C + + LG+ V H +K +
Sbjct: 622 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV--HGWAVKLRLD 679
Query: 337 GDYVL---LLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHP 393
+ VL L+++YS G + + + N K + + +V F + +H
Sbjct: 680 KELVLNNALMDMYSKCGCITNAQMIFKMNNNK--------NVVSWNTMVGGFSAEGDTHG 731
Query: 394 RINEIYQML 402
+ + QML
Sbjct: 732 TFDVLRQML 740
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/487 (39%), Positives = 272/487 (55%), Gaps = 4/487 (0%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M Q+ N S AI C L G +IHA + G+Q D + TLMD Y+ +
Sbjct: 1 MNQEGTAPNNHTLSIAIAACSALVDLSRGRKIHASLEGCGFQADDHVKNTLMDFYTKCDS 60
Query: 81 SFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLV 139
+ K+F + V+W LI ++ R+A F + E G D VT +
Sbjct: 61 LDDVKKVFRSMGGDAKVVSWTCLIVGCVQLGSYREAFHFFKLM--ELQGIHADTVTYASL 118
Query: 140 LQACAHLGALEFGEKIHRYISEHGY-GSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKD 198
L AC++L +L G K+H I+E G + + L S++ MYSKCG LG A +F + EK+
Sbjct: 119 LDACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEKN 178
Query: 199 VVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLD 258
+V+WSA+I A NG A++ F M++AG + TF VL ACSH GLVD+ +
Sbjct: 179 IVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFT 238
Query: 259 RMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHV 318
M + + P HYGC+VDLLGRAG L A +LI M +W TLLGAC+ H +
Sbjct: 239 TMKSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQRMKAPQSGVLWTTLLGACKTHGDM 298
Query: 319 TLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGL 378
L ER E + EL + YVLL N+YS G W+ +R+ M++ ++ G S + +
Sbjct: 299 KLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAASVRKRMDDMKVKKPAGKSWVEV 358
Query: 379 KGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHS 438
+G +HEFV D SHP+I EI L + +K AGY A+ ++ LHN EEK L YHS
Sbjct: 359 RGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKSATLHNAEEEEKEGLLYYHS 418
Query: 439 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGR 498
EKLA+ G+L +P G ++V KNLR+C DCH AK +S V +R++++RD +FHHF GR
Sbjct: 419 EKLAMVMGLLHSPRGEPVQVVKNLRVCSDCHTAAKFISKVEDRQIVLRDTKQFHHFEHGR 478
Query: 499 CSCNDYW 505
CSC DYW
Sbjct: 479 CSCGDYW 485
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 10 SPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG-YQLDSQLM 68
S E F+ F+ M + I + + + C SL G ++HAR+ G + D L
Sbjct: 92 SYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQ 151
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T+++ +YS + EA +FD I +++ VAW+ +I Y +N AL LF + E++G
Sbjct: 152 TSILTMYSKCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLFWKM--EQAG 209
Query: 129 CKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNS----LIAMYSKCGSL 184
K + T + VL AC+H G + + + Y + K+ ++ + + G L
Sbjct: 210 QKASETTFVSVLYACSHAGLV---DDAYYYFTTMKSERKLEPLPGHYGCIVDLLGRAGRL 266
Query: 185 GMAFEVFKGM--PEKDVVSWSAMISGLAMNG 213
A E+ + M P+ V+ W+ ++ +G
Sbjct: 267 ADAEELIQRMKAPQSGVL-WTTLLGACKTHG 296
>gi|413955987|gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
Length = 555
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 274/505 (54%), Gaps = 38/505 (7%)
Query: 34 SFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKL------ 87
+F ++ C K L ++IH + + G + L LY + EAC+L
Sbjct: 56 AFLLRACAKCSDLYAAMEIHCHLTKVGLLSKQHITPPLFKLYISHGYMLEACELLWSMLE 115
Query: 88 ---------------------------FDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
F +P +D ++WN +I+ +R+ ++A+ +F
Sbjct: 116 WNTDPFHGNLMLMGFLKSGRLDKAYQIFKRMPVKDLISWNSMIAGAVRSSHLKEAMNIFS 175
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L SG PD + VL ACA GA +G +H ++E G L ++L+ MY+K
Sbjct: 176 RL--VSSGLVPDCFSFSSVLSACARAGARRYGVWVHHLMTELGVEMNHILSSALVDMYAK 233
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CG + +A E+F + + W+ MISGLA +G G D + F M+ + PD TF +
Sbjct: 234 CGRIDVATEIFNKVKGNHISVWNTMISGLASHGLGSDVVILFHKMKSEELVPDGVTFVAL 293
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L+ACS CG+V+E + M+ ++ I P + HYG +VD L RAGLLD+AY+L+ SM VKP
Sbjct: 294 LTACSRCGMVEEARHYFRSMTTEYSITPEVEHYGALVDTLSRAGLLDEAYELVMSMNVKP 353
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
D IWR LL ACR ++H LGE IEH + SGDY LL N+YSS W +E+ +
Sbjct: 354 DVVIWRALLSACRRYRHTKLGEATIEH---MACHGSGDYTLLSNIYSSANRWNDSEEVWK 410
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
+K ++ T G S + L G HEF D SHP +IY +L + ++ K+ GY
Sbjct: 411 QRKQKKVRKTKGLSWVELGGSTHEFKAGDRSHPDTEDIYVVLHGLCRRAKVEGYAPLTEL 470
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
++ EE+ L++HSEKLA+A+ VL T PGT I V+KNL++C DCH + K++S V
Sbjct: 471 VTKDVSEEEREENLTFHSEKLAVAYSVLKTGPGTEIMVSKNLQVCSDCHEWMKIISKVLC 530
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RDR+RFH F G CSC DYW
Sbjct: 531 RVIILRDRVRFHRFESGWCSCKDYW 555
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 131 PDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS----------- 179
PD T +L+ACA L +IH ++++ G SK ++ L +Y
Sbjct: 50 PDYRTYAFLLRACAKCSDLYAAMEIHCHLTKVGLLSKQHITPPLFKLYISHGYMLEACEL 109
Query: 180 ----------------------KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRD 217
K G L A+++FK MP KD++SW++MI+G + H ++
Sbjct: 110 LWSMLEWNTDPFHGNLMLMGFLKSGRLDKAYQIFKRMPVKDLISWNSMIAGAVRSSHLKE 169
Query: 218 AIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVV 277
A+ F + +G+ PD +F+ VLSAC+ G G +++ + + G+ N +V
Sbjct: 170 AMNIFSRLVSSGLVPDCFSFSSVLSACARAGARRYG-VWVHHLMTELGVEMNHILSSALV 228
Query: 278 DLLGRAGLLDQAYQLITSMGVKPDS-TIWRTLLGACRIHKHVTLGERVIEHLIELKAQE- 335
D+ + G +D A ++ VK + ++W T++ H LG V+ ++K++E
Sbjct: 229 DMYAKCGRIDVATEIFNK--VKGNHISVWNTMISGLASHG---LGSDVVILFHKMKSEEL 283
Query: 336 SGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQ--TTPGCSTIGLKGVVHEFVVDDVSHP 393
D V + L ++ V+E R + + TP G +VD +S
Sbjct: 284 VPDGVTFVALLTACSRCGMVEEARHYFRSMTTEYSITPEVEHYGA-------LVDTLSRA 336
Query: 394 -RINEIYQMLDEINKQLKIAGYVAEITS 420
++E Y+++ +N + + + A +++
Sbjct: 337 GLLDEAYELVMSMNVKPDVVIWRALLSA 364
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ SS +E +F ++ + + F+ S + C + + G+ +H + G
Sbjct: 157 MIAGAVRSSHLKEAMNIFSRLVSSGLVPDCFSFSSVLSACARAGARRYGVWVHHLMTELG 216
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+++ L + L+D+Y+ + A ++F+++ WN +IS + D + LF
Sbjct: 217 VEMNHILSSALVDMYAKCGRIDVATEIFNKVKGNHISVWNTMISGLASHGLGSDVVILFH 276
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYS 179
+ EE PD VT + +L AC+ G +E R + +E+ ++ +L+ S
Sbjct: 277 KMKSEE--LVPDGVTFVALLTACSRCGMVEEARHYFRSMTTEYSITPEVEHYGALVDTLS 334
Query: 180 KCGSLGMAFEVFKGMPEK-DVVSWSAMISG 208
+ G L A+E+ M K DVV W A++S
Sbjct: 335 RAGLLDEAYELVMSMNVKPDVVIWRALLSA 364
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 281/501 (56%), Gaps = 3/501 (0%)
Query: 5 YSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLD 64
Y+ + + LF KM + + + + S +K C L G QIH +++ G + +
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246
Query: 65 SQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNR 124
+ T L+D Y A K F+ I + + V+W+ LI+ Y + +AL F++L
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT 306
Query: 125 EESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSL 184
+ T + QAC+ L G + H + + + +++I MYS+CG L
Sbjct: 307 R--SVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRL 364
Query: 185 GMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSAC 244
A VF+ + + D V+W+A+I+G A G+ +A++ F MQ GV P+ TF VL+AC
Sbjct: 365 DYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTAC 424
Query: 245 SHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTI 304
SH GLV EG +L+ MS ++G+ I HY C+VD+ RAG L +A +LI SM PD+
Sbjct: 425 SHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMS 484
Query: 305 WRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE 364
W+ LLG C ++++ +GE E+L +L +++ Y+L+ NLY+S G W++ +R+ M E
Sbjct: 485 WKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAE 544
Query: 365 KGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHN 424
+ L+ CS I +KG VH F+V D HP+ EIY L+ +N + I +T E +
Sbjct: 545 RNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSV-IKEETGLLTEEDVS 603
Query: 425 LGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVI 484
E+ L HSE+LA+AFG+++TP + V KNLR C DCH+F K +S + RE++
Sbjct: 604 NSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIV 663
Query: 485 IRDRLRFHHFREGRCSCNDYW 505
+RD RFHHF+ G CSCNDYW
Sbjct: 664 VRDSFRFHHFKLGECSCNDYW 684
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 5/295 (1%)
Query: 21 MRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEK 80
M I +P + + C K SL G H ++ R L +++ +Y
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 81 SFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVL 140
+A K+FDE+ +R+ V+WN +IS Y N C+F N+ E+ KP+ T + L
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELET--KPNGSTYIGFL 118
Query: 141 QACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVV 200
++ + LE G++IH + G GS ++ ++ MY KCG L A VF+ M EK+ V
Sbjct: 119 RSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAV 178
Query: 201 SWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRM 260
+W+ ++ G DA+ F M GV D+ F+ VL AC+ ++ G +
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI 238
Query: 261 SKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLL-GACRI 314
K G+ + +VD + L+ A + + +P+ W L+ G C++
Sbjct: 239 VK-LGLESEVSVGTPLVDFYVKCSNLESATKAFEWIS-EPNDVSWSALITGYCQM 291
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 4/210 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
++ Y EE FE +R + + N F + + C G Q HA ++
Sbjct: 284 LITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSS 343
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ ++ +YS + A ++F+ I D VAW +I+ Y +AL LF
Sbjct: 344 LVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFR 403
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLG-ALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ ++ G +P+ VT + VL AC+H G +E + + S +G + ++ + ++ +YS
Sbjct: 404 RM--QDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYS 461
Query: 180 KCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G L A E+ + MP D +SW ++ G
Sbjct: 462 RAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/507 (39%), Positives = 299/507 (58%), Gaps = 13/507 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD- 59
++ A S P L + QK+I N F + + K C +G AR + D
Sbjct: 266 VISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAK-CGSIGA----ARRIFDE 320
Query: 60 -GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCL 118
G +S ++ Y+ A +LF+ +P R+ V WN +I+ Y +N ++ A+ L
Sbjct: 321 LGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIEL 380
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
F + + PD+VT + V+ AC HLGALE G + R+++E+ ++ N++I MY
Sbjct: 381 FKEMITAKK-LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 439
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
S+CGS+ A VF+ M +DVVS++ +ISG A +GHG +AI M+ G+ PD TF
Sbjct: 440 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 499
Query: 239 GVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGV 298
GVL+ACSH GL++EG + + KD P I HY C+VDLLGR G L+ A + + M +
Sbjct: 500 GVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGRVGELEDAKRTMERMPM 554
Query: 299 KPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKEL 358
+P + ++ +LL A RIHK V LGE L EL+ SG+++LL N+Y+S G W+ V+ +
Sbjct: 555 EPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERI 614
Query: 359 REFMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEI 418
RE M + G++ T G S + G +H+F+V D SH R ++IYQ+L E+ K+++ AGY+A+
Sbjct: 615 REAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 674
Query: 419 TSELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGV 478
+ L ++ EEK + HSEKLAI + +L + G IRV KNLR+C DCH K++S +
Sbjct: 675 SCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKL 734
Query: 479 YNREVIIRDRLRFHHFREGRCSCNDYW 505
R +I+RD RFH F +G CSC DYW
Sbjct: 735 EGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 69 TTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESG 128
T ++ Y+ + A + FD +P+R V+WN ++S Y +N + L LFD + +G
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEM--VNAG 255
Query: 129 CKPDDVTCLLVLQACAHLG----ALEFGEKIH---------------------------- 156
+PD+ T + V+ AC+ G A +H
Sbjct: 256 IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAAR 315
Query: 157 RYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGR 216
R E G N++I+ Y++ G+L A E+F MP ++VV+W++MI+G A NG
Sbjct: 316 RIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSA 375
Query: 217 DAIESFGAMQRA-GVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGC 275
AIE F M A + PD+ T V+SAC H G ++ G ++ R + I +I +
Sbjct: 376 MAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG-NWVVRFLTENQIKLSISGHNA 434
Query: 276 VVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKH 317
++ + R G ++ A ++ M + D + TL+ H H
Sbjct: 435 MIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAHGH 475
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 130/314 (41%), Gaps = 51/314 (16%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+R YS + +FE M+ + + F IK GG+ HA VL+ G
Sbjct: 71 MLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLG 125
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIP--QRDTVAWNVLISCYIRNQRTRDALCL 118
+ D+ + ++D+Y+ A K+FDEIP +R WN ++S Y + + A L
Sbjct: 126 HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWL 185
Query: 119 FDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMY 178
FD + P+ + +++ Y
Sbjct: 186 FDVM--------PE---------------------------------RNVITWTAMVTGY 204
Query: 179 SKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFT 238
+K L A F MPE+ VVSW+AM+SG A NG + + F M AG+ PD+ T+
Sbjct: 205 AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWV 264
Query: 239 GVLSACSHCGLVDEGMMF-LDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMG 297
V+SACS G D + L R I N ++D+ + G + A ++ +G
Sbjct: 265 TVISACSSRG--DPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELG 322
Query: 298 VKPDSTIWRTLLGA 311
+S W ++ A
Sbjct: 323 AYRNSVTWNAMISA 336
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/498 (37%), Positives = 285/498 (57%), Gaps = 3/498 (0%)
Query: 4 AYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQL 63
YS + P+E L+ +M + FA S A+K C L G +HA+VL+
Sbjct: 151 GYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDP 210
Query: 64 DSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLN 123
D + L+ LYS EA ++FD +P R+ V+WN LI+ ++ + +A+ F +
Sbjct: 211 DQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIM- 269
Query: 124 REESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGS 183
+ G VT +L CA + AL G++IH I + + NSL+ MY+KCG+
Sbjct: 270 -QGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGA 328
Query: 184 LGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSA 243
+ VF GM KD+ SW+ +I+G A+NG +A+ESF M +G PD TF +LS
Sbjct: 329 MDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSG 388
Query: 244 CSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDST 303
CSH GL D+G + M D GI P + HY C+VD+LGRAG + +A +++ +M KP +
Sbjct: 389 CSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGS 448
Query: 304 IWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMN 363
IW +LL +CR+H +V L E V + L EL+ +G+YV+L N+Y++ G WE VK +REFM
Sbjct: 449 IWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFME 508
Query: 364 EKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRIN-EIYQMLDEINKQLKIAGYVAEITSEL 422
++G+ GCS + +K +H FV + R + E ++ + + ++ GYV + L
Sbjct: 509 KRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVL 568
Query: 423 HNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNRE 482
H++ E + + HSE+LA F ++ T G IR+ KNLR+CVDCH++ K LS V R
Sbjct: 569 HDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRV 628
Query: 483 VIIRDRLRFHHFREGRCS 500
+++RD RFHHF++G CS
Sbjct: 629 IVLRDTNRFHHFKDGVCS 646
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 441 LAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLS 476
LA F ++ T G IR+ KNL +CVDCH++ K++S
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVS 735
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 100 NVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYI 159
N + ++ + +AL L ++ + PD C L L +C ALE G++++ +
Sbjct: 34 NSTLKSLSKSGKLDEALRLIESWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 93
Query: 160 SEHGYGSKMNLCNS------LIAMYSKCGSLGMAFEVFK------GMPEKDVVSWSAMIS 207
+ NL N+ LI ++S CG + A VF+ +PE W AM
Sbjct: 94 LLYRDRCNHNLLNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPES---VWVAMGI 150
Query: 208 GLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEG 253
G + NG+ ++A+ + M + F+ L ACS G + G
Sbjct: 151 GYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTG 196
>gi|297792411|ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 259/422 (61%), Gaps = 4/422 (0%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A K+ ++ + WN++I Y+RN + +AL N+ S KP+ + L AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKTLKNM-LSFSDFKPNKFSFASSLAAC 175
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWS 203
A LG L + +H + + G L ++L+ +Y+KCG + + EVF + DV W+
Sbjct: 176 ARLGDLHHAKWVHSLMIDGGIEFNAILSSALVDVYAKCGDIETSREVFCSVKRNDVSIWN 235
Query: 204 AMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD 263
AMI+G A +G +AI F M+ V PD TF G+L+ACSHCGL++EG + MS+
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTACSHCGLLEEGKEYFGLMSRR 295
Query: 264 FGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGER 323
F I P + HYG +VDLLGRAG + +AY+LI SM ++PD IWR+LL + R K+ LGE
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGQVKEAYELIESMPIEPDVVIWRSLLSSSRTFKNPELGEI 355
Query: 324 VIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNEKGLQTTPGCSTIGLKGVVH 383
I++L + K SGDYVLL N+YSS WE +++RE M ++G++ G S + GV+H
Sbjct: 356 AIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMTKEGIRKAKGKSWVEFGGVIH 412
Query: 384 EFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEEKGNALSYHSEKLAI 443
F D SH IY++L+ + ++ K G+V++ L ++ EEK L+YHSEKLA+
Sbjct: 413 RFKAGDTSHIETKAIYKVLEGLIQKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 472
Query: 444 AFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRCSCND 503
A+ +L + PGT IR+ KN+R+C DCHN+ K +S + NR + +RDR+RFH F +G CSC D
Sbjct: 473 AYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVITMRDRIRFHRFEDGLCSCKD 532
Query: 504 YW 505
YW
Sbjct: 533 YW 534
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 5/211 (2%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQ-KRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRD 59
M+ Y + EE + M N F+ + ++ C + L +H+ ++
Sbjct: 135 MIGGYVRNVQYEEALKTLKNMLSFSDFKPNKFSFASSLAACARLGDLHHAKWVHSLMIDG 194
Query: 60 GYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLF 119
G + ++ L + L+D+Y+ + ++F + + D WN +I+ + + +A+ +F
Sbjct: 195 GIEFNAILSSALVDVYAKCGDIETSREVFCSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEH-GYGSKMNLCNSLIAMY 178
+ E PD +T L +L AC+H G LE G++ +S K+ +++ +
Sbjct: 255 SEMEAEH--VSPDSITFLGLLTACSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLL 312
Query: 179 SKCGSLGMAFEVFKGMP-EKDVVSWSAMISG 208
+ G + A+E+ + MP E DVV W +++S
Sbjct: 313 GRAGQVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 126 ESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMN---------------- 169
ES P + C VLQA AH+ L +G +S + N
Sbjct: 38 ESCKAPSNSKC--VLQAHAHIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 170 --LCNS--LIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAM 225
+CN+ +I K G G+A +V + +++V++W+ MI G N +A+++ M
Sbjct: 96 PGVCNTNLIIESLVKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKTLKNM 155
Query: 226 QRAGVF-PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAG 284
F P+ +F L+AC+ G + ++ + D GI N +VD+ + G
Sbjct: 156 LSFSDFKPNKFSFASSLAACARLGDLHHA-KWVHSLMIDGGIEFNAILSSALVDVYAKCG 214
Query: 285 LLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL-IELKAQESGDYVLLL 343
++ + ++ S+ + D +IW ++ H T RV + E + +S ++ LL
Sbjct: 215 DIETSREVFCSVK-RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 344 NLYSSVGDWEKVKELREFMNEK 365
S G E+ KE M+ +
Sbjct: 274 TACSHCGLLEEGKEYFGLMSRR 295
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 192/425 (45%), Positives = 264/425 (62%), Gaps = 7/425 (1%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQAC 143
A +LFDE+ +RD V+W+ +I+ Y++ +AL F + + E KP++ T + L AC
Sbjct: 363 AKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSE--VKPNEYTMVSALAAC 420
Query: 144 AHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVF-KGMPEKDVVSW 202
++L AL+ G+ IH YI L SLI MY+KCG + A VF + ++ V W
Sbjct: 421 SNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPW 480
Query: 203 SAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDEGMMFLDRMSK 262
+AMI G AM+G +AI F M+ V P+ TF +L+ACSH +V EG + + M+
Sbjct: 481 NAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMAS 540
Query: 263 DFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGE 322
D+GI P I HYGC+VDLL R+G L + ++I SM + PD IW LL ACRI+K + G
Sbjct: 541 DYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGY 600
Query: 323 RVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELREFMNE--KGLQTTPGCSTIGLKG 380
R+ + E+ G VLL N+YS+ G W + + +RE NE + PG S+I L G
Sbjct: 601 RIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVRE-KNEINSDRKKIPGFSSIELNG 659
Query: 381 VVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITSELHNLGAEE-KGNALSYHSE 439
V HEF+V D SHP+ EIY LDE+ +LKIAGYV E+ L + EE K ALS HSE
Sbjct: 660 VFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETALSVHSE 719
Query: 440 KLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYNREVIIRDRLRFHHFREGRC 499
KLAIAFG++ T PGT IR+ KNLR+C DCH K +S VY+R +I+RDR+R+HHF++G C
Sbjct: 720 KLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHHFKDGIC 779
Query: 500 SCNDY 504
SC DY
Sbjct: 780 SCKDY 784
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 35/294 (11%)
Query: 84 ACKLFDEIPQRDTVAWNVLISCYIRNQRTR-DALCLFDNLNREESGCKPDDVTCLLVLQA 142
A KLFD+IPQ D +N +I + + + D++ +F +L R+ SG P+ + + A
Sbjct: 229 AHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRD-SGYFPNRYSFVFAFGA 287
Query: 143 CAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSW 202
C + + GE++ + + G + + N+LI M+ K G + A VF ++D SW
Sbjct: 288 CGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSW 347
Query: 203 SAMISGLAMNG------------HGRD-------------------AIESFGAMQRAGVF 231
+ MI +G H RD A++ F M ++ V
Sbjct: 348 NTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVK 407
Query: 232 PDDQTFTGVLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQ 291
P++ T L+ACS+ +D+G + +D I N ++D+ + G +D A
Sbjct: 408 PNEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCGEIDSASS 466
Query: 292 LITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHL-IELKAQESGDYVLLLN 344
+ VK W ++G +H V E + +E + ++ LLN
Sbjct: 467 VFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLN 520
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 13 EGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLM 72
E F KM Q + N + A+ C +L G IH + RD +++ +L+ +L+
Sbjct: 393 EALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLI 452
Query: 73 DLYSTFEKSFEACKLFDEIP-QRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKP 131
D+Y+ + A +F E +R WN +I + + + +A+ +F+ + E+ P
Sbjct: 453 DMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEK--VSP 510
Query: 132 DDVTCLLVLQACAHLGALEFGEKIHRYI-SEHGYGSKMNLCNSLIAMYSKCGSLGMAFEV 190
+ VT + +L AC+H ++ G+ + S++G ++ ++ + S+ G L + E+
Sbjct: 511 NKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEM 570
Query: 191 FKGMP-EKDVVSWSAMISG 208
MP DV W A+++
Sbjct: 571 ILSMPMAPDVAIWGALLNA 589
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 280/505 (55%), Gaps = 2/505 (0%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ Y ++ LF M+Q+ I + + C +H V G
Sbjct: 434 MIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESG 493
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
+ T+L+++Y+ + A + E+ ++ AWNVLI+ Y + R+R+AL +
Sbjct: 494 LGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQ 553
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
L E D VT + VL AC +L G+ IH E G S + + N+L MYSK
Sbjct: 554 KLQLE--AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSK 611
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
CGS+ A +F MP + VSW+ M+ A +G + ++ M++ GV + TF V
Sbjct: 612 CGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSV 671
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
LS+CSH GL+ EG + + D GI HYGC+VDLLGRAG L +A + I+ M ++P
Sbjct: 672 LSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEP 731
Query: 301 DSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGDYVLLLNLYSSVGDWEKVKELRE 360
W +LLGACR+ K + G+ L+EL S V+L N+YS GDW+ +LR
Sbjct: 732 GIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRR 791
Query: 361 FMNEKGLQTTPGCSTIGLKGVVHEFVVDDVSHPRINEIYQMLDEINKQLKIAGYVAEITS 420
M + ++ PG S+I +K VHEF V D SHPR EIY ++E+ ++ AGYV +
Sbjct: 792 AMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKM 851
Query: 421 ELHNLGAEEKGNALSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGVYN 480
LH++ E+K + L+YHSEKLAIAFG+++TP +++ + KNLR+C DCH K +S +
Sbjct: 852 VLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITG 911
Query: 481 REVIIRDRLRFHHFREGRCSCNDYW 505
RE+++RD RFHHFR+G CSC DYW
Sbjct: 912 REIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 177/391 (45%), Gaps = 48/391 (12%)
Query: 17 LFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYS 76
LF +M + + N + + +L G IH+ V + LD + T L++ Y+
Sbjct: 147 LFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYT 206
Query: 77 TFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTC 136
+A K+FD +P R WN +IS Y ++R+ +A +F + +E C D VT
Sbjct: 207 KCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERC--DRVTF 264
Query: 137 LLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPE 196
L +L AC + L+ G+ + ISE + + + +LI MY++C S A +VF M +
Sbjct: 265 LSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQ 324
Query: 197 KDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGVLSACS----------- 245
++++WSA+I+ A +GH +A+ F MQ+ G+ P+ TF +L+ +
Sbjct: 325 TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 384
Query: 246 ------------------------HCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLG 281
C D+ D++ LPN+ + ++ +
Sbjct: 385 HLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLE-----LPNLISWNSMIGIYV 439
Query: 282 RAGLLDQAYQLITSM---GVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 338
+ D A QL +M G++PD + T+LGAC I H +++ +E
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH-GRTRKLVHQCVEESGLGGSP 498
Query: 339 YVL--LLNLYSSVGDWEKVKELREFMNEKGL 367
V L+N+Y+ G+ + + + + M+E+ +
Sbjct: 499 LVQTSLVNMYAKAGELDVAEVILQEMDEQQI 529
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 172/377 (45%), Gaps = 16/377 (4%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS S +E LF M + + N + C F L G+ +HA L G
Sbjct: 29 MISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERG 88
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCY-IRNQRTRDALCLF 119
+ ++ + T L+++Y +A +F+E+ +++ V WN ++ Y ++ + A+ LF
Sbjct: 89 FFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELF 148
Query: 120 DNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYS 179
+ E G K + +T L VL + AL G+ IH + E + + + +L+ Y+
Sbjct: 149 TRMLLE--GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYT 206
Query: 180 KCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTG 239
KCGSL A +VF GMP + V +W++MIS +++ +A F MQ+ G D TF
Sbjct: 207 KCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLS 266
Query: 240 VLSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVK 299
+L AC + + G + +S+ L ++ ++ + R + A Q+ M +
Sbjct: 267 ILDACVNPETLQHGKHVRESISETSFEL-DLFVGTALITMYARCRSPEDAAQVFGRMK-Q 324
Query: 300 PDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESG------DYVLLLNLYSSVGDWE 353
+ W ++ A H H R + Q+ G ++ LLN +++ E
Sbjct: 325 TNLITWSAIITAFADHGHCGEALRYFRMM-----QQEGILPNRVTFISLLNGFTTPSGLE 379
Query: 354 KVKELREFMNEKGLQTT 370
++ + + E GL T
Sbjct: 380 ELSRIHLLITEHGLDDT 396
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 148/315 (46%), Gaps = 4/315 (1%)
Query: 1 MVRAYSMSSSPEEGFYLFEKMRQKRIPTNPFACSFAIKCCMKFCSLMGGLQIHARVLRDG 60
M+ AYS+S E F++F++M+Q+ + + C+ +L G + +
Sbjct: 232 MISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETS 291
Query: 61 YQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFD 120
++LD + T L+ +Y+ +A ++F + Q + + W+ +I+ + + +AL F
Sbjct: 292 FELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFR 351
Query: 121 NLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSK 180
+ +E G P+ VT + +L LE +IH I+EHG + N+L+ +Y +
Sbjct: 352 MMQQE--GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGR 409
Query: 181 CGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVFPDDQTFTGV 240
C S A VF + +++SW++MI DA++ F MQ+ G+ PD F +
Sbjct: 410 CESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTI 469
Query: 241 LSACSHCGLVDEGMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKP 300
L AC+ G + + ++ G+ + +V++ +AG LD A ++ M +
Sbjct: 470 LGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQ 527
Query: 301 DSTIWRTLLGACRIH 315
T W L+ +H
Sbjct: 528 QITAWNVLINGYALH 542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 18/303 (5%)
Query: 74 LYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQRTRDALCLFDNLNREESGCKPDD 133
+YS +A F +I R+ V+WNV+IS Y + ++AL LF + E G P+
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLE--GVAPNA 58
Query: 134 VTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKG 193
+T + VL +C L G +H E G+ + +L+ MY KCG+L A VF+
Sbjct: 59 ITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118
Query: 194 MPEKDVVSWSAMISGLAMNG-HGRDAIESFGAMQRAGVFPDDQTFTGVLSACSHCGLVDE 252
M EK+VV+W+AM+ ++ G + A+E F M GV + TF VL++ + +
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 253 GMMFLDRMSKDFGILPNIHHYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGAC 312
G F+ ++ ++ +V+ + G L A ++ M + T W +++ A
Sbjct: 179 G-KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGT-WNSMISA- 235
Query: 313 RIHKHVTLGERVIE-HLIELKAQESG---DYVLLLNLYSSVGDWEKV---KELREFMNEK 365
++ ER E I + Q+ G D V L++ + + E + K +RE ++E
Sbjct: 236 -----YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET 290
Query: 366 GLQ 368
+
Sbjct: 291 SFE 293
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,062,343,876
Number of Sequences: 23463169
Number of extensions: 340757445
Number of successful extensions: 1189018
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7492
Number of HSP's successfully gapped in prelim test: 4007
Number of HSP's that attempted gapping in prelim test: 1071533
Number of HSP's gapped (non-prelim): 46885
length of query: 505
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 358
effective length of database: 8,910,109,524
effective search space: 3189819209592
effective search space used: 3189819209592
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 79 (35.0 bits)