Query 010644
Match_columns 505
No_of_seqs 383 out of 2295
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 11:13:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 5.8E-43 2E-47 349.8 9.9 235 60-333 26-271 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 7.5E-42 2.6E-46 337.5 7.5 226 58-324 23-255 (256)
3 3htm_A Speckle-type POZ protei 99.9 7.1E-26 2.4E-30 209.2 9.1 138 64-238 32-171 (172)
4 3hqi_A Speckle-type POZ protei 99.9 5.9E-24 2E-28 215.2 9.7 139 63-238 171-311 (312)
5 4eoz_A Speckle-type POZ protei 99.9 4.2E-23 1.4E-27 185.2 3.9 120 64-219 23-144 (145)
6 2vkp_A BTB/POZ domain-containi 99.8 4.1E-21 1.4E-25 164.2 5.8 99 61-191 3-107 (109)
7 2if5_A Zinc finger and BTB dom 99.8 8E-21 2.7E-25 165.4 6.2 99 61-190 20-120 (120)
8 2z8h_A Transcription regulator 99.8 3.2E-20 1.1E-24 165.9 7.8 105 62-199 32-138 (138)
9 2ppi_A Gigaxonin; BTB domain, 99.8 2.6E-20 8.8E-25 168.0 7.2 101 59-190 40-144 (144)
10 1r29_A B-cell lymphoma 6 prote 99.8 3.3E-20 1.1E-24 163.2 6.2 99 61-191 24-125 (127)
11 2yy9_A Zinc finger and BTB dom 99.8 1.5E-20 5.2E-25 167.5 3.3 101 60-196 19-121 (135)
12 3b84_A Zinc finger and BTB dom 99.8 5.7E-20 2E-24 160.1 5.0 96 61-191 19-116 (119)
13 2vpk_A Myoneurin; transcriptio 99.8 1.1E-19 3.7E-24 157.3 5.7 97 62-191 18-116 (116)
14 3ohu_A Transcription regulator 99.8 5.4E-20 1.9E-24 161.4 3.5 96 61-189 27-125 (125)
15 1buo_A POZ domain, protein (pr 99.8 2.1E-19 7.2E-24 156.9 6.0 95 61-191 23-119 (121)
16 2ihc_A Transcription regulator 99.8 1.1E-19 3.9E-24 159.3 3.3 97 62-190 25-123 (124)
17 3m5b_A Zinc finger and BTB dom 99.8 4.9E-19 1.7E-23 154.5 5.7 91 61-191 25-117 (119)
18 3ga1_A Nucleus accumbens-assoc 99.7 5E-19 1.7E-23 156.2 2.6 97 61-191 28-126 (129)
19 2q81_A MIZ-1 protein; BTB/POZ 99.7 5E-19 1.7E-23 154.1 2.0 94 61-190 22-117 (119)
20 2eqx_A Kelch repeat and BTB do 99.7 3.1E-18 1.1E-22 146.1 6.1 96 189-297 4-99 (105)
21 3fkc_A Transcriptional regulat 99.7 3.3E-17 1.1E-21 142.1 5.9 87 61-183 26-115 (116)
22 2ast_A S-phase kinase-associat 99.3 2E-12 7E-17 118.2 5.3 102 69-203 3-135 (159)
23 4ajy_C Transcription elongatio 98.9 6.2E-10 2.1E-14 93.1 5.2 72 74-177 12-96 (97)
24 1fs1_B SKP1, cyclin A/CDK2-ass 98.8 3.9E-09 1.3E-13 94.4 4.4 99 69-204 4-131 (141)
25 2p1m_A SKP1-like protein 1A; F 98.7 1.7E-09 5.7E-14 98.9 0.3 97 74-206 14-140 (160)
26 1hv2_A Elongin C, ELC1; protei 97.9 9.5E-06 3.2E-10 67.8 4.4 77 69-178 6-99 (99)
27 2fnj_C Transcription elongatio 97.8 1.1E-05 3.9E-10 66.9 3.2 73 74-178 11-96 (96)
28 3v7d_A Suppressor of kinetocho 97.7 2.5E-05 8.5E-10 71.7 4.7 92 68-191 8-131 (169)
29 3drz_A BTB/POZ domain-containi 97.7 7.1E-05 2.4E-09 63.3 6.5 93 68-191 7-106 (107)
30 3ii7_A Kelch-like protein 7; p 97.4 0.0015 5.1E-08 64.0 13.3 53 349-405 6-65 (306)
31 2zwa_A Leucine carboxyl methyl 97.3 0.00012 4E-09 81.5 4.4 114 272-405 315-461 (695)
32 2xn4_A Kelch-like protein 2; s 97.3 0.0013 4.4E-08 64.3 11.2 47 354-404 109-164 (302)
33 2xn4_A Kelch-like protein 2; s 97.2 0.0025 8.5E-08 62.2 12.6 47 354-404 62-117 (302)
34 2vpj_A Kelch-like protein 12; 97.2 0.0032 1.1E-07 61.4 12.9 52 349-404 9-71 (301)
35 4asc_A Kelch repeat and BTB do 97.2 0.0015 5.2E-08 64.4 10.3 52 362-417 164-220 (315)
36 3ii7_A Kelch-like protein 7; p 97.2 0.0024 8.3E-08 62.5 11.6 40 361-404 116-158 (306)
37 2vpj_A Kelch-like protein 12; 97.1 0.0043 1.5E-07 60.4 12.9 48 354-405 113-169 (301)
38 2woz_A Kelch repeat and BTB do 97.0 0.0025 8.6E-08 62.9 10.6 53 362-418 126-184 (318)
39 1zgk_A Kelch-like ECH-associat 97.0 0.0043 1.5E-07 60.9 11.8 48 354-405 122-178 (308)
40 2woz_A Kelch repeat and BTB do 97.0 0.0027 9.2E-08 62.7 10.2 40 361-404 173-215 (318)
41 4asc_A Kelch repeat and BTB do 97.0 0.0031 1E-07 62.2 10.3 39 362-404 116-157 (315)
42 1zgk_A Kelch-like ECH-associat 96.9 0.0041 1.4E-07 61.1 11.0 39 362-404 89-130 (308)
43 1vcb_B Protein (elongin C); tu 96.9 0.00042 1.4E-08 59.1 3.1 73 74-178 27-112 (112)
44 2uvk_A YJHT; unknown function, 96.7 0.005 1.7E-07 61.6 10.0 47 354-404 20-74 (357)
45 3ivv_A Speckle-type POZ protei 96.7 0.002 6.8E-08 56.9 6.1 113 391-505 28-144 (145)
46 2uvk_A YJHT; unknown function, 96.6 0.013 4.6E-07 58.4 12.0 40 362-405 85-128 (357)
47 2zwa_A Leucine carboxyl methyl 96.4 0.0072 2.5E-07 67.1 9.3 41 361-405 466-510 (695)
48 3drx_A BTB/POZ domain-containi 96.1 0.0087 3E-07 56.0 6.6 93 68-191 13-112 (202)
49 3hqi_A Speckle-type POZ protei 95.8 0.0098 3.4E-07 59.1 6.0 112 391-504 24-139 (312)
50 1k3i_A Galactose oxidase precu 95.4 0.02 6.8E-07 62.8 7.2 62 354-419 254-324 (656)
51 3kvt_A Potassium channel prote 95.2 0.031 1.1E-06 47.6 6.1 93 68-191 6-104 (115)
52 2foj_A Ubiquitin carboxyl-term 95.0 0.057 1.9E-06 47.9 7.5 111 392-504 33-148 (155)
53 1s1g_A Potassium voltage-gated 94.1 0.094 3.2E-06 45.2 6.5 53 131-186 52-105 (124)
54 1k3i_A Galactose oxidase precu 93.3 0.051 1.8E-06 59.4 4.4 39 362-404 487-530 (656)
55 1nn7_A Potassium channel KV4.2 93.2 0.077 2.6E-06 44.3 4.2 53 131-186 39-92 (105)
56 2nz0_B Potassium voltage-gated 92.5 0.13 4.4E-06 45.3 4.9 53 131-186 74-127 (140)
57 1t1d_A Protein (potassium chan 91.8 0.19 6.4E-06 41.6 4.7 53 131-186 41-95 (100)
58 2f1z_A Ubiquitin carboxyl-term 90.9 0.28 9.4E-06 52.3 6.3 109 393-504 46-160 (522)
59 1ca9_A TRAF2, protein (TNF rec 90.3 0.17 5.7E-06 46.7 3.4 109 393-504 66-190 (192)
60 4gjh_A TNF receptor-associated 89.5 0.21 7.1E-06 45.5 3.4 104 393-504 47-173 (178)
61 1d00_A Tumor necrosis factor r 86.5 0.48 1.6E-05 42.3 3.8 103 394-504 43-166 (168)
62 1lb6_A TNF receptor-associated 80.6 5.2 0.00018 35.1 8.1 111 393-505 28-157 (160)
63 1flk_A TNF receptor associated 78.0 5.5 0.00019 37.5 7.7 108 393-504 99-223 (228)
64 4ghu_A TNF receptor-associated 74.9 6.1 0.00021 36.3 6.9 110 391-504 61-187 (198)
65 2gkw_A TNF receptor-associated 69.4 8.9 0.0003 34.9 6.6 108 393-504 63-187 (192)
66 2eqx_A Kelch repeat and BTB do 64.3 3.9 0.00013 33.5 2.8 34 157-191 5-38 (105)
67 2vkp_A BTB/POZ domain-containi 63.0 5.2 0.00018 32.3 3.3 34 193-230 76-109 (109)
68 3i3n_A Kelch-like protein 11; 52.5 23 0.00078 33.8 6.5 93 193-315 106-198 (279)
69 2z8h_A Transcription regulator 51.1 7.5 0.00026 33.1 2.4 36 193-232 100-135 (138)
70 1r29_A B-cell lymphoma 6 prote 46.5 14 0.00048 30.7 3.4 33 193-229 94-126 (127)
71 2yy9_A Zinc finger and BTB dom 45.4 8.8 0.0003 32.6 1.9 38 193-234 86-123 (135)
72 3htm_A Speckle-type POZ protei 42.6 11 0.00038 32.9 2.2 33 160-194 132-164 (172)
73 2r9r_B Paddle chimera voltage 40.0 30 0.001 36.5 5.4 50 130-182 91-141 (514)
74 2vpk_A Myoneurin; transcriptio 38.8 19 0.00065 29.3 3.0 31 193-227 85-115 (116)
75 3b84_A Zinc finger and BTB dom 38.6 14 0.00049 30.4 2.1 33 193-229 85-117 (119)
76 2q81_A MIZ-1 protein; BTB/POZ 38.0 21 0.00072 29.3 3.1 31 193-227 87-117 (119)
77 1buo_A POZ domain, protein (pr 34.6 30 0.001 28.4 3.5 33 193-229 88-120 (121)
78 2if5_A Zinc finger and BTB dom 31.0 35 0.0012 27.8 3.4 30 193-226 90-119 (120)
79 2ast_A S-phase kinase-associat 26.8 1.5E+02 0.005 25.7 6.9 55 183-254 86-140 (159)
80 2ppi_A Gigaxonin; BTB domain, 24.1 31 0.001 29.5 1.8 30 193-226 114-143 (144)
81 3m5b_A Zinc finger and BTB dom 20.7 52 0.0018 27.1 2.5 32 193-228 86-117 (119)
82 4eoz_A Speckle-type POZ protei 20.3 38 0.0013 28.3 1.6 34 193-230 90-123 (145)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=5.8e-43 Score=349.82 Aligned_cols=235 Identities=20% Similarity=0.350 Sum_probs=213.3
Q ss_pred CCCCCCCccEEEEEE-----EEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEE
Q 010644 60 DPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYV 134 (505)
Q Consensus 60 ~~~~~~~~dv~~~v~-----~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v 134 (505)
++..+.+|||++.|+ +|+|||.|||++|+||++ ||+++++|+.+..|
T Consensus 26 l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~----------------------------mf~~~~~e~~~~~i 77 (279)
T 3i3n_A 26 QRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTP----------------------------LLSGQFSESRSGRV 77 (279)
T ss_dssp HHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGG----------------------------GCCC--------EE
T ss_pred HHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHH----------------------------HhcCCCccccCCeE
Confidence 345589999999984 699999999999999999 99999999999999
Q ss_pred EEec----CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccHHHHHhhcchhh
Q 010644 135 TLRI----HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVL 210 (505)
Q Consensus 135 ~l~~----~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Ncl~il~~A~~~~ 210 (505)
+|+. +++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|+.|
T Consensus 78 ~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~- 154 (279)
T 3i3n_A 78 EMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY- 154 (279)
T ss_dssp ECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT-
T ss_pred EeccccccCCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc-
Confidence 9862 279999999999999999999986 9999999999999999999999999999 89999999999999987
Q ss_pred hcccchhHHHHHHHHHhhccccccccchhhcCCCHHHHHHhhcCCCccccchhhHHHHHHHhhhccCCChHHHHHHHhhh
Q 010644 211 MADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSR 290 (505)
Q Consensus 211 ~a~~~~~L~~~~~~fI~~nf~~v~~~~~eFl~L~~~~L~~LL~sd~L~V~sE~~V~~avl~Wi~~~~~~~~~R~~~l~~~ 290 (505)
++..|.+.|.+||.+||.++.+ +++|.+||.+.+..+|++|+|+|.+|.+||+++++|++++ +++|.+++ ++
T Consensus 155 ---~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ 226 (279)
T 3i3n_A 155 ---TLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EE 226 (279)
T ss_dssp ---TCHHHHHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HH
T ss_pred ---CcHHHHHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HH
Confidence 9999999999999999999999 9999999999999999999999999999999999999998 88999999 89
Q ss_pred ccccccCCCcChhhHhhhccCCCCC--ChhHHHHHHHHHhhhcCC
Q 010644 291 LGRLIRFPYMTCRKLKKVLTCNDFD--PELASKVVLESLFFKAET 333 (505)
Q Consensus 291 LL~~VRf~lls~~~L~~~~~~~~l~--~~~~~~lv~ea~~~~~~~ 333 (505)
||++||||+|++++|.+.+.++++. ++.|++++.+|++||..+
T Consensus 227 ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~ 271 (279)
T 3i3n_A 227 LFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALR 271 (279)
T ss_dssp HHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCc
Confidence 9999999999999999988887764 588999999999999854
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=7.5e-42 Score=337.47 Aligned_cols=226 Identities=17% Similarity=0.293 Sum_probs=187.2
Q ss_pred CcCCCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcc--cCCccE
Q 010644 58 NIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR--ESEQRY 133 (505)
Q Consensus 58 ~~~~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~--es~~~~ 133 (505)
+.++..+.+|||++.| ++|+|||.|||++|+||++ ||++++. |+.+..
T Consensus 23 ~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~----------------------------mf~~~~~~~e~~~~~ 74 (256)
T 3hve_A 23 SSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRT----------------------------KLNYNPPKDDGSTYK 74 (256)
T ss_dssp HTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHH----------------------------TC-----------CE
T ss_pred HHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHH----------------------------HhCCCCCcccCCCCe
Confidence 3456779999999999 5899999999999999999 9999887 566677
Q ss_pred EEEecCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccHHHHHhhcchhhhcc
Q 010644 134 VTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMAD 213 (505)
Q Consensus 134 v~l~~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Ncl~il~~A~~~~~a~ 213 (505)
|+++ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|+.|
T Consensus 75 i~l~--~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~~~---- 146 (256)
T 3hve_A 75 IELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFALHY---- 146 (256)
T ss_dssp EECS--SCCHHHHHHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHHHT----
T ss_pred EEeC--CCCHHHHHHHHhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHHHc----
Confidence 8877 99999999999999999999996 9999999999999999999999999999 89999999999999987
Q ss_pred cchhHHHHHHHHHhhccccccccchhhcCCCHHHHHHhhcCCCccccchhhHHHHHHHhhhccCCChHHHHHHHhhhccc
Q 010644 214 AVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGR 293 (505)
Q Consensus 214 ~~~~L~~~~~~fI~~nf~~v~~~~~eFl~L~~~~L~~LL~sd~L~V~sE~~V~~avl~Wi~~~~~~~~~R~~~l~~~LL~ 293 (505)
++..|.+.|.+||.+||.++.+ +++|.+||.+.+..+|++|+|+|.+|.+||+++++|++++ +++|.+++ ++||+
T Consensus 147 ~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~~~~-~~ll~ 221 (256)
T 3hve_A 147 CLHHVHYLATEYLETHFRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRKVHM-KDVMS 221 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCSTTTH-HHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHH
Confidence 9999999999999999999999 9999999999999999999999999999999999999999 67899998 89999
Q ss_pred cccCCCcChhhHhhhccCCCCCC---hhHHHHHH
Q 010644 294 LIRFPYMTCRKLKKVLTCNDFDP---ELASKVVL 324 (505)
Q Consensus 294 ~VRf~lls~~~L~~~~~~~~l~~---~~~~~lv~ 324 (505)
+||||+|++++|.+.+.++++.. +.|++++.
T Consensus 222 ~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 222 ALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp HHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred hCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 99999999999999888888763 24776654
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.92 E-value=7.1e-26 Score=209.20 Aligned_cols=138 Identities=25% Similarity=0.355 Sum_probs=126.7
Q ss_pred CCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecCCC
Q 010644 64 SMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHAS 141 (505)
Q Consensus 64 ~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~ 141 (505)
+.+|||++.+ ++|+|||.||+++|+||++ ||+++++|+.+..|.|+ ++
T Consensus 32 ~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~----------------------------~f~~~~~e~~~~~i~l~--~~ 81 (172)
T 3htm_A 32 SRFTDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEIN--DV 81 (172)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHSCCCGGGTTEEEEC--SS
T ss_pred CCCcceEEEECCEEEEeeHHHHHHcCHHHHH----------------------------HHccCccccCCCeEEec--CC
Confidence 7799999999 5899999999999999999 99999999999999998 99
Q ss_pred CHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccHHHHHhhcchhhhcccchhHHHH
Q 010644 142 EEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDT 221 (505)
Q Consensus 142 ~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Ncl~il~~A~~~~~a~~~~~L~~~ 221 (505)
++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| ++..|.+.
T Consensus 82 ~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~----~~~~L~~~ 155 (172)
T 3htm_A 82 EPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQ 155 (172)
T ss_dssp CHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHT----TCHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CcHHHHHH
Confidence 999999999999999999986 9999999999999999999999999999 89999999999999988 99999999
Q ss_pred HHHHHhhccccccccch
Q 010644 222 AKQFLAARYKDISKFQE 238 (505)
Q Consensus 222 ~~~fI~~nf~~v~~~~~ 238 (505)
|.+||.+||.++.+ ++
T Consensus 156 ~~~~i~~~~~~v~~-s~ 171 (172)
T 3htm_A 156 AVDFINYHATDVLE-TS 171 (172)
T ss_dssp HHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHc-CC
Confidence 99999999999987 54
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.89 E-value=5.9e-24 Score=215.18 Aligned_cols=139 Identities=25% Similarity=0.344 Sum_probs=122.2
Q ss_pred CCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecCC
Q 010644 63 WSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHA 140 (505)
Q Consensus 63 ~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~ 140 (505)
.+.+|||+|.| ++|+|||.|||++||||++ ||.++++|+.+.+|+|+ +
T Consensus 171 ~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~----------------------------~f~~~~~e~~~~~i~l~--~ 220 (312)
T 3hqi_A 171 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEIN--D 220 (312)
T ss_dssp TTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HTTC-----CCSEEEEC--S
T ss_pred CCCCCceEEEECCEEEeHHHHHHHHcCHHHHH----------------------------HhccCccccCCceEEec--C
Confidence 37789999999 5899999999999999999 99999999999999998 9
Q ss_pred CCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccHHHHHhhcchhhhcccchhHHH
Q 010644 141 SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTD 220 (505)
Q Consensus 141 ~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Ncl~il~~A~~~~~a~~~~~L~~ 220 (505)
+++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .++.+||+.++.+|+.| ++..|++
T Consensus 221 ~~~~~f~~~L~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~ 294 (312)
T 3hqi_A 221 VEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKT 294 (312)
T ss_dssp SCHHHHHHHHHHHHHSCCTTHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHH
T ss_pred CCHHHHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHH
Confidence 9999999999999999999886 8999999999999999999999999999 89999999999999988 9999999
Q ss_pred HHHHHHhhccccccccch
Q 010644 221 TAKQFLAARYKDISKFQE 238 (505)
Q Consensus 221 ~~~~fI~~nf~~v~~~~~ 238 (505)
+|.+||..||.++.+ ++
T Consensus 295 ~~~~~i~~~~~~v~~-s~ 311 (312)
T 3hqi_A 295 QAVDFINYHATDVLE-TS 311 (312)
T ss_dssp HHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHhh-CC
Confidence 999999999999987 54
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.86 E-value=4.2e-23 Score=185.20 Aligned_cols=120 Identities=27% Similarity=0.368 Sum_probs=90.3
Q ss_pred CCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecCCC
Q 010644 64 SMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHAS 141 (505)
Q Consensus 64 ~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~ 141 (505)
+.+|||++.+ +.|+|||.||+++|+||++ ||++++.|+.+..|.++ ++
T Consensus 23 ~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~----------------------------~f~~~~~e~~~~~i~l~--~~ 72 (145)
T 4eoz_A 23 SRFTDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEIN--DV 72 (145)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHSSSHHHHHTEEEEC--SS
T ss_pred CCCcceEEEECCEEEEeehHHHHHcCHHHHH----------------------------HHcCCCcCCCCceEEec--CC
Confidence 7789999999 5899999999999999999 99999999888999998 99
Q ss_pred CHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccHHHHHhhcchhhhcccchhHH
Q 010644 142 EEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLT 219 (505)
Q Consensus 142 ~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Ncl~il~~A~~~~~a~~~~~L~ 219 (505)
++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|+.| ++.+|+
T Consensus 73 ~~~~~~~~l~~~Y~~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~----~~~~Lk 144 (145)
T 4eoz_A 73 EPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLK 144 (145)
T ss_dssp CHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHCC-------------------------------
T ss_pred CHHHHHHHHHhhccCccCCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CHHHhc
Confidence 999999999999999999986 9999999999999999999999999999 89999999999999987 777765
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.82 E-value=4.1e-21 Score=164.15 Aligned_cols=99 Identities=26% Similarity=0.404 Sum_probs=87.4
Q ss_pred CCCCCCccEEEEE------EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEE
Q 010644 61 PAWSMDLSTVLRV------KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYV 134 (505)
Q Consensus 61 ~~~~~~~dv~~~v------~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v 134 (505)
+..+.+|||++.+ +.|+|||.|||++|+||++ ||++++.|+. ..|
T Consensus 3 ~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~----------------------------~f~~~~~e~~-~~i 53 (109)
T 2vkp_A 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYA----------------------------MFYGDLAEVK-SEI 53 (109)
T ss_dssp TTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHH----------------------------HHC------C-CEE
T ss_pred ccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHH----------------------------HhcCCcccCC-CeE
Confidence 4568899999999 2699999999999999999 9999999988 888
Q ss_pred EEecCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 135 TLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 135 ~l~~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
.|+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|.++|.+
T Consensus 54 ~l~--~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 54 HIP--DVEPAAFLILLKYMYSDEIDLEA-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp EET--TSCHHHHHHHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EeC--CCCHHHHHHHHHHHcCCCccCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 887 99999999999999999999996 9999999999999999999999999976
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.82 E-value=8e-21 Score=165.40 Aligned_cols=99 Identities=28% Similarity=0.431 Sum_probs=88.4
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+.++.+|||++.+ ++|+|||.|||++|+||++ ||++++.|+.+..|+++
T Consensus 20 ~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~----------------------------~f~~~~~e~~~~~i~l~- 70 (120)
T 2if5_A 20 RTQGLLCDVVILVEGREFPTHRSVLAACSQYFKK----------------------------LFTSGAVVDQQNVYEID- 70 (120)
T ss_dssp HHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHC-----CCSEEECC-
T ss_pred HhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHH----------------------------HhcCCccccCCceEEeC-
Confidence 3458899999999 5899999999999999999 99999999999999998
Q ss_pred CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcc
Q 010644 139 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 190 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~ 190 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 71 -~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 71 -FVSAEALTALMDFAYTATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp -SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred -CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 99999999999999999999996 999999999999999999999999874
No 8
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.81 E-value=3.2e-20 Score=165.93 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=95.3
Q ss_pred CCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecC
Q 010644 62 AWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIH 139 (505)
Q Consensus 62 ~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~ 139 (505)
..+.+|||++.+ ++|+|||.|||++|+||++ ||.+++.|+ ..|+++ +
T Consensus 32 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~~~e~--~~i~l~-~ 80 (138)
T 2z8h_A 32 KKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHS----------------------------RIVGQTDAE--LTVTLP-E 80 (138)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTTCCCTT--EEEECC-T
T ss_pred hhCCCcCeEEEECCEEEechHHHHHHcCHHHHH----------------------------HHhcCCCCC--ceEEeC-C
Confidence 448899999999 5899999999999999999 999988763 566663 3
Q ss_pred CCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccH
Q 010644 140 ASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 199 (505)
Q Consensus 140 ~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Nc 199 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+ +++.+|+
T Consensus 81 ~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sna 138 (138)
T 2z8h_A 81 EVTVKGFEPLIQFAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDSTS 138 (138)
T ss_dssp TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCCC
T ss_pred CCCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hcccccC
Confidence 89999999999999999999996 9999999999999999999999999999 8998873
No 9
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.80 E-value=2.6e-20 Score=167.95 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=88.2
Q ss_pred cCCCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCccc--CCccEE
Q 010644 59 IDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRE--SEQRYV 134 (505)
Q Consensus 59 ~~~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~e--s~~~~v 134 (505)
.++..+.+|||+|.+ +.|+|||.|||++|+||++ ||++++.| +....|
T Consensus 40 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------mf~~~~~e~e~~~~~I 91 (144)
T 2ppi_A 40 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRT----------------------------KLNYNPPKDDGSTYKI 91 (144)
T ss_dssp HTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHHCC-----CCCEE
T ss_pred HHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHH----------------------------HHcCCCccccCCCcEE
Confidence 345569999999999 5899999999999999999 99998876 556777
Q ss_pred EEecCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcc
Q 010644 135 TLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 190 (505)
Q Consensus 135 ~l~~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~ 190 (505)
.|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||+
T Consensus 92 ~l~--~v~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 92 ELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp ECC--SSCHHHHHHHHHHHTTSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred EeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 776 99999999999999999999996 999999999999999999999999984
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.80 E-value=3.3e-20 Score=163.22 Aligned_cols=99 Identities=19% Similarity=0.396 Sum_probs=92.7
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEE-e
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTL-R 137 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l-~ 137 (505)
+..+.+|||++.+ ++|+|||.|||++|+||++ ||++++.| .+..|+| +
T Consensus 24 ~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~----------------------------~f~~~~~e-~~~~i~l~~ 74 (127)
T 1r29_A 24 RSRDILTDVVIVVSREQFRAHKTVLMACSGLFYS----------------------------IFTDQLKR-NLSVINLDP 74 (127)
T ss_dssp HHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTSTTTT-TCSEEECCT
T ss_pred HhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHH----------------------------HhcCCccC-CCCEEEeCC
Confidence 3458899999999 5899999999999999999 99999998 7788888 6
Q ss_pred cCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 138 IHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 138 ~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 75 --~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 75 --EINPEGFNILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp --TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred --CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999999986 9999999999999999999999999976
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.79 E-value=1.5e-20 Score=167.49 Aligned_cols=101 Identities=23% Similarity=0.311 Sum_probs=86.4
Q ss_pred CCCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEe
Q 010644 60 DPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLR 137 (505)
Q Consensus 60 ~~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~ 137 (505)
++.++.+|||++.+ ++|+|||.|||++|+||++ ||.+++ +..|+|+
T Consensus 19 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------mf~~~~----~~~i~l~ 66 (135)
T 2yy9_A 19 QREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQR----------------------------IYGDGT----GGSVVLP 66 (135)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------TCC--------CCEEEC
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHH----------------------------HHcCCC----CCeEEeC
Confidence 34558899999999 5899999999999999999 999876 5678887
Q ss_pred cCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCc
Q 010644 138 IHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTC 196 (505)
Q Consensus 138 ~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~ 196 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+ ++..
T Consensus 67 --~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~ 121 (135)
T 2yy9_A 67 --AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVG 121 (135)
T ss_dssp --GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred --CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccC
Confidence 99999999999999999999996 9999999999999999999999999998 5653
No 12
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.78 E-value=5.7e-20 Score=160.07 Aligned_cols=96 Identities=25% Similarity=0.324 Sum_probs=87.5
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+.++.+|||++.+ ++|+|||.|||++|+||++ ||++++ +..|+|+
T Consensus 19 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~~----~~~i~l~- 65 (119)
T 3b84_A 19 REKGQYCDATLDVGGLVFKAHWSVLACCSHFFQS----------------------------LYGDGS----GGSVVLP- 65 (119)
T ss_dssp HHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTTTT----CCCEEEC-
T ss_pred HhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHH----------------------------HHCCCC----CCeEEeC-
Confidence 3448899999999 5899999999999999999 999876 5678887
Q ss_pred CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 139 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 66 -~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 66 -AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp -GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred -CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999999999996 9999999999999999999999999987
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.78 E-value=1.1e-19 Score=157.34 Aligned_cols=97 Identities=18% Similarity=0.286 Sum_probs=88.2
Q ss_pred CCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecC
Q 010644 62 AWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIH 139 (505)
Q Consensus 62 ~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~ 139 (505)
.++.+|||++.+ ++|+|||.|||++|+||++ ||+++ .+..|+|+++
T Consensus 18 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~----------------------------~f~~~----~~~~i~l~~~ 65 (116)
T 2vpk_A 18 EAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGA----------------------------IYRST----SENNVFLDQS 65 (116)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTTC----CCSCEECCTT
T ss_pred hcCCCCcEEEEECCEEEeccHHHHhhcCHHHHH----------------------------HHcCC----CCCeEEeecC
Confidence 348899999999 5899999999999999999 99986 3567877766
Q ss_pred CCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 140 ASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 140 ~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 66 ~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 66 QVKADGFQKLLEFIYTGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp TCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 89999999999999999999986 9999999999999999999999999863
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.78 E-value=5.4e-20 Score=161.37 Aligned_cols=96 Identities=20% Similarity=0.294 Sum_probs=88.4
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+..+.+|||++.+ +.|+|||.|||++|+||++ ||.+++.| +..|.++
T Consensus 27 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~~~e--~~~i~l~- 75 (125)
T 3ohu_A 27 RKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQ----------------------------ALVGQTKN--DLVVSLP- 75 (125)
T ss_dssp HHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------------HHTTCCCS--SCEEECC-
T ss_pred HhcCCccceEEEECCEEEechHHHHHHcCHHHHH----------------------------HhcCCCCC--CcEEEeC-
Confidence 3448899999999 5899999999999999999 99998876 5677776
Q ss_pred CC-CCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhc
Q 010644 139 HA-SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLL 189 (505)
Q Consensus 139 ~~-~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L 189 (505)
+ +++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||
T Consensus 76 -~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 76 -EEVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp -TTCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred -CCCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 7 9999999999999999999996 99999999999999999999999986
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.77 E-value=2.1e-19 Score=156.86 Aligned_cols=95 Identities=24% Similarity=0.355 Sum_probs=87.3
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+..+.+|||++.+ ++|+|||.|||++|+||++ ||+++ +..|+++
T Consensus 23 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~-----~~~i~l~- 68 (121)
T 1buo_A 23 RLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEI----------------------------LFHRN-----SQHYTLD- 68 (121)
T ss_dssp HHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHH----------------------------HTTSC-----CSEEEEC-
T ss_pred HhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHH----------------------------HHcCC-----CcEEEeC-
Confidence 3448899999999 4899999999999999999 99874 4678887
Q ss_pred CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 139 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 69 -~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 69 -FLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp -SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHhhcCCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99999999999999999999996 9999999999999999999999999976
No 16
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.76 E-value=1.1e-19 Score=159.33 Aligned_cols=97 Identities=16% Similarity=0.222 Sum_probs=85.3
Q ss_pred CCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecC
Q 010644 62 AWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIH 139 (505)
Q Consensus 62 ~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~ 139 (505)
.++.+|||++.+ ++|+|||.|||++|+||++ ||++++.|+ ..|+++ +
T Consensus 25 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~----------------------------mf~~~~~e~--~~i~l~-~ 73 (124)
T 2ihc_A 25 KKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHS----------------------------RIVGQADGE--LNITLP-E 73 (124)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------------HHTTC---C--EEEECC-T
T ss_pred hcCCCcCEEEEECCEEEecHHHHHHHcCHHHHH----------------------------HHcCCCCCC--ceEeec-C
Confidence 448899999999 5899999999999999999 999988764 566663 3
Q ss_pred CCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcc
Q 010644 140 ASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 190 (505)
Q Consensus 140 ~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~ 190 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 74 ~v~~~~f~~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 74 EVTVKGFEPLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp TSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CcCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 89999999999999999999986 999999999999999999999999985
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.75 E-value=4.9e-19 Score=154.52 Aligned_cols=91 Identities=20% Similarity=0.202 Sum_probs=81.1
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+..+.+|||++.+ +.|+|||+|||++|+||++ . +..|+|+
T Consensus 25 r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~---------~~~i~l~- 66 (119)
T 3m5b_A 25 RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----------------------------R---------GQWALGE- 66 (119)
T ss_dssp HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC----------------------------C---------EEEECCS-
T ss_pred HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc----------------------------C---------CCEEEeC-
Confidence 3448899999999 5899999999999999987 2 3456666
Q ss_pred CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 139 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++++++
T Consensus 67 -~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 67 -GISPSTFAQLLNFVYGESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -SCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999999999996 9999999999999999999999999876
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.73 E-value=5e-19 Score=156.20 Aligned_cols=97 Identities=20% Similarity=0.288 Sum_probs=81.7
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+..+.+|||++.+ +.|+|||.|||++|+||++ ||.++ .+..|+|+
T Consensus 28 ~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~----------------------------~f~~~----~~~~i~l~- 74 (129)
T 3ga1_A 28 RLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRD----------------------------LFNNS----RSAVVELP- 74 (129)
T ss_dssp HHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------------HHHHC----CCSEEECC-
T ss_pred HhcCCCcceEEEECCEEEEehHHHHHHcCHHHHH----------------------------HHcCC----CCCEEEEC-
Confidence 3448899999999 5899999999999999999 99886 45677773
Q ss_pred CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 139 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
+++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 75 ~~~~~~~f~~ll~~iYtg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 75 AAVQPQSFQQILSFCYTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp TTCCHHHHHHHHHHHHHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred CCCCHHHHHHHHHHHhCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 289999999999999999999996 9999999999999999999999999987
No 19
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.73 E-value=5e-19 Score=154.12 Aligned_cols=94 Identities=27% Similarity=0.364 Sum_probs=85.0
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+.++.+|||++.+ +.|+|||.|||++|+||++ ||+++ +..|.++
T Consensus 22 ~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~----------------------------~f~~~-----~~~i~l~- 67 (119)
T 2q81_A 22 RQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKM----------------------------LFVDQ-----KDVVHLD- 67 (119)
T ss_dssp HHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHHC-----CSGGGGG-
T ss_pred HhcCCCcceEEEECCEEEehhHHHHHHcCHHHHH----------------------------HHcCC-----CCEEEeC-
Confidence 4448899999999 5899999999999999999 99863 3456665
Q ss_pred CCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhcc
Q 010644 139 HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 190 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~ 190 (505)
++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 68 -~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 68 -ISNAAGLGQVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp -GCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 89999999999999999999996 999999999999999999999999985
No 20
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.1e-18 Score=146.09 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=91.4
Q ss_pred cccCccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhccccccccchhhcCCCHHHHHHhhcCCCccccchhhHHHH
Q 010644 189 LRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDF 268 (505)
Q Consensus 189 L~~~~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf~~v~~~~~eFl~L~~~~L~~LL~sd~L~V~sE~~V~~a 268 (505)
+.+ +++++||+.++.+|+.| ++.+|.++|.+||.+||.++.+ +++|++||.+.+..+|++| |.+|.+||+|
T Consensus 4 ~~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~a 74 (105)
T 2eqx_A 4 GSS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEA 74 (105)
T ss_dssp CCC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHH
T ss_pred hhc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHH
Confidence 456 79999999999999988 9999999999999999999999 9999999999999999997 7899999999
Q ss_pred HHHhhhccCCChHHHHHHHhhhccccccC
Q 010644 269 ALKWARTHYPKLEERREILGSRLGRLIRF 297 (505)
Q Consensus 269 vl~Wi~~~~~~~~~R~~~l~~~LL~~VRf 297 (505)
+++|++++ +++|.+++ ++||++||+
T Consensus 75 v~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 75 IEAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 99999999 88999999 999999996
No 21
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.67 E-value=3.3e-17 Score=142.07 Aligned_cols=87 Identities=22% Similarity=0.320 Sum_probs=78.9
Q ss_pred CCCCCCccEEEEE--EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEec
Q 010644 61 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRI 138 (505)
Q Consensus 61 ~~~~~~~dv~~~v--~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~ 138 (505)
+..+.+|||++.+ +.|+|||.|||++|+||++ ||.++ +..|.++
T Consensus 26 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~----------------------------~f~~~-----~~~i~l~- 71 (116)
T 3fkc_A 26 RGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQ----------------------------LFSVA-----GQVVELS- 71 (116)
T ss_dssp HHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HTTSC-----CSEEEEC-
T ss_pred HhcCCceeEEEEECCEEEehhHHHHHHcCHHHHH----------------------------HHcCC-----CCEEEeC-
Confidence 3448899999999 5899999999999999999 99875 5678887
Q ss_pred CCCCHHHHHHHHHHHhcCCc-cCCccchHHHHHHHHhHHHhhhhHH
Q 010644 139 HASEEAALMELLNFMYSSTL-STTTPTALLDVLMAADKFEVASCMR 183 (505)
Q Consensus 139 ~~~~~~~f~~ll~fiYtg~~-~~~~~~~~~~ll~aA~~~~v~~l~~ 183 (505)
++++++|+.+|+|+|||++ .++. +++.+++.+|++|+++.|++
T Consensus 72 -~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 72 -FIRAEIFAEILNYIYSSKIVRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp -SSCHHHHHHHHHHHTTSCCCSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred -CCCHHHHHHHHHhhcCCCcCCCCH-HHHHHHHHHHHHhCccccCc
Confidence 9999999999999999999 6885 99999999999999999874
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.28 E-value=2e-12 Score=118.16 Aligned_cols=102 Identities=16% Similarity=0.265 Sum_probs=83.5
Q ss_pred EEEEE---EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccC-Ccc-cCCccEEEEecCCCCH
Q 010644 69 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN-GMR-ESEQRYVTLRIHASEE 143 (505)
Q Consensus 69 v~~~v---~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~~-es~~~~v~l~~~~~~~ 143 (505)
|++.. +.|.+||.+ |++|+||++ ||.+ ++. |+.+..|.|+ ++++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~----------------------------m~~~~~~~~e~~~~~Ipl~--~V~~ 51 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKT----------------------------MLEDLGMDDEGDDDPVPLP--NVNA 51 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHH----------------------------HTTSSCSS------CEECT--TSCH
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHH----------------------------HHHhcCCcccccCCCcCCC--CccH
Confidence 55554 479999999 899999999 9998 777 7777788887 9999
Q ss_pred HHHHHHHHHHhcCC--------------------------ccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcc
Q 010644 144 AALMELLNFMYSST--------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCE 197 (505)
Q Consensus 144 ~~f~~ll~fiYtg~--------------------------~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~ 197 (505)
.+++.+++|+|++. +.++. +++.+|+.||++|++..|.++|++++.. .+...
T Consensus 52 ~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~-~i~gk 129 (159)
T 2ast_A 52 AILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGK 129 (159)
T ss_dssp HHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHSSC
T ss_pred HHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCC
Confidence 99999999999998 77875 8999999999999999999999999987 46555
Q ss_pred cHHHHH
Q 010644 198 SALLYL 203 (505)
Q Consensus 198 Ncl~il 203 (505)
++-.+.
T Consensus 130 t~eeir 135 (159)
T 2ast_A 130 TPEEIR 135 (159)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 544444
No 23
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.94 E-value=6.2e-10 Score=93.12 Aligned_cols=72 Identities=18% Similarity=0.251 Sum_probs=59.6
Q ss_pred EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccC--CcccCCccEEEEecCCCCHHHHHHHHH
Q 010644 74 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN--GMRESEQRYVTLRIHASEEAALMELLN 151 (505)
Q Consensus 74 ~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~--~~~es~~~~v~l~~~~~~~~~f~~ll~ 151 (505)
++|.+||.+ |++|+||++ ||.+ ++.|+.+..|.|+ ++++.+++.+++
T Consensus 12 ~~F~v~r~v-A~~S~~ik~----------------------------m~~~~~~~~E~~~~~I~l~--~V~~~iL~kVie 60 (97)
T 4ajy_C 12 HEFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCM 60 (97)
T ss_dssp CEEEEEHHH-HTTSHHHHH----------------------------HHCCC--------CEEECT--TSCHHHHHHHHH
T ss_pred cEEEecHHH-HHHhHHHHH----------------------------HHHhCCCccccCCCceECC--CCCHHHHHHHHH
Confidence 479999999 999999999 9987 6778778888887 999999999999
Q ss_pred HHh-----c---CCcc---CCccchHHHHHHHHhHHH
Q 010644 152 FMY-----S---STLS---TTTPTALLDVLMAADKFE 177 (505)
Q Consensus 152 fiY-----t---g~~~---~~~~~~~~~ll~aA~~~~ 177 (505)
|+| + +.+. ++. +++.+|+.||++|+
T Consensus 61 y~~~h~~~~~~~~~i~~~~i~~-~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 61 YFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLD 96 (97)
T ss_dssp HHHHHHHHTTCCSCCCCCCCCG-GGHHHHHHHHHHHT
T ss_pred HHHHhcccCCCcCCCCcCcCCH-HHHHHHHHHHhhhC
Confidence 999 5 7777 875 99999999999997
No 24
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.76 E-value=3.9e-09 Score=94.40 Aligned_cols=99 Identities=13% Similarity=0.183 Sum_probs=82.2
Q ss_pred EEEEE---EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecCCCCHHH
Q 010644 69 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAA 145 (505)
Q Consensus 69 v~~~v---~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~~~ 145 (505)
|++.. +.|.+|+.+ |.+|++|+. ||.+.- ...|.|+ +++..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~----------------------------ml~~~~----~~~Ipl~--~V~~~i 48 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKT----------------------------MLEDLG----MDPVPLP--NVNAAI 48 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHH----------------------------HHHHTC----CSSEECT--TCCHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHH----------------------------HHHhcC----CCceecC--CcCHHH
Confidence 45554 479999998 899999999 997631 3467776 999999
Q ss_pred HHHHHHHHhcCC--------------------------ccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCccCcccH
Q 010644 146 LMELLNFMYSST--------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 199 (505)
Q Consensus 146 f~~ll~fiYtg~--------------------------~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l~~~Nc 199 (505)
++.+++|+|+.. +.++. +++.+|+.||++|++..|.++|++++.. .+.-.+.
T Consensus 49 L~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~ 126 (141)
T 1fs1_B 49 LKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTP 126 (141)
T ss_dssp HHHHHHHHHHHTTCC-----------------HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCH
T ss_pred HHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCH
Confidence 999999999876 66775 8999999999999999999999999998 5766666
Q ss_pred HHHHh
Q 010644 200 LLYLD 204 (505)
Q Consensus 200 l~il~ 204 (505)
-++..
T Consensus 127 eeiR~ 131 (141)
T 1fs1_B 127 EEIRK 131 (141)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 25
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.71 E-value=1.7e-09 Score=98.85 Aligned_cols=97 Identities=10% Similarity=0.229 Sum_probs=56.3
Q ss_pred EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecCCCCHHHHHHHHHHH
Q 010644 74 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFM 153 (505)
Q Consensus 74 ~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~~~f~~ll~fi 153 (505)
+.|.+|+.+ |.+|++|+. ||.+.. ....|.|+ +++..+++.+++|+
T Consensus 14 ~~f~v~~~v-A~~S~~ik~----------------------------ml~~~~---~~~~Ipl~--~V~~~iL~kVieyc 59 (160)
T 2p1m_A 14 ESFEVEEAV-ALESQTIAH----------------------------MVEDDC---VDNGVPLP--NVTSKILAKVIEYC 59 (160)
T ss_dssp ------CHH-HHTCTTTC-------------------------------------------CCT--TSCHHHHHHHHHC-
T ss_pred CEEEECHHH-HHHhHHHHH----------------------------HHHccC---CCCceeCC--cCcHHHHHHHHHHH
Confidence 479999998 889999999 998753 23456665 99999999999999
Q ss_pred hcCC---------------------------ccCCccchHHHHHHHHhHHHhhhhHHHHhhhcccCcc---CcccHHHHH
Q 010644 154 YSST---------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM---TCESALLYL 203 (505)
Q Consensus 154 Ytg~---------------------------~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l---~~~Ncl~il 203 (505)
|+.. +.++. +++.+|+.||++|++..|.++|++++.. .+ +++.+-.++
T Consensus 60 ~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f 137 (160)
T 2p1m_A 60 KRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTF 137 (160)
T ss_dssp ------------------------------------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHT
T ss_pred HHcccCCCcccccccccccccchhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHc
Confidence 9886 35664 8999999999999999999999999998 57 666666665
Q ss_pred hhc
Q 010644 204 DLP 206 (505)
Q Consensus 204 ~~A 206 (505)
.++
T Consensus 138 ~I~ 140 (160)
T 2p1m_A 138 NIK 140 (160)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 26
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.87 E-value=9.5e-06 Score=67.82 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=62.9
Q ss_pred EEEEE---EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcccCCccEEEEecCCCCHHH
Q 010644 69 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAA 145 (505)
Q Consensus 69 v~~~v---~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~~~ 145 (505)
|++.. ..|.+++.+ |..|.+++. ||.+++ |+....|.|+ +++..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~----------------------------ml~~~~-e~~~~~Iplp--~V~~~i 53 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKA----------------------------MIEGPF-RESKGRIELK--QFDSHI 53 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHH----------------------------HHHSST-TTCTTEEEET--TSCHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHH----------------------------HHhccc-ccCCCceecC--CcCHHH
Confidence 44554 479999997 889999999 998866 6556788887 999999
Q ss_pred HHHHHHHHhcCC--------------ccCCccchHHHHHHHHhHHHh
Q 010644 146 LMELLNFMYSST--------------LSTTTPTALLDVLMAADKFEV 178 (505)
Q Consensus 146 f~~ll~fiYtg~--------------~~~~~~~~~~~ll~aA~~~~v 178 (505)
++.+++|+|.-. ..++. +++.+|+.||++|++
T Consensus 54 L~kVieyc~~h~~~~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 54 LEKAVEYLNYNLKYSGVSEDDDEIPEFEIPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCSSCCCCCCCH-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCCccccccCCCccCCH-HHHHHHHHHHHHhCc
Confidence 999999998643 13553 789999999999974
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.77 E-value=1.1e-05 Score=66.92 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=56.2
Q ss_pred EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccC-Cc-ccCCccEEEEecCCCCHHHHHHHHH
Q 010644 74 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN-GM-RESEQRYVTLRIHASEEAALMELLN 151 (505)
Q Consensus 74 ~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~-~es~~~~v~l~~~~~~~~~f~~ll~ 151 (505)
..|.+++.+ |..|++++. |+.+ +. .|+....|.|+ +++..+++.+++
T Consensus 11 ~~f~V~~~~-A~~S~~ik~----------------------------ml~~~~~~~e~~~~~Ipl~--~V~~~iL~kVie 59 (96)
T 2fnj_C 11 HEFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCM 59 (96)
T ss_dssp CEEEEEHHH-HTTSHHHHH----------------------------HHHCC--------CEEECS--SCCHHHHHHHHH
T ss_pred CEEEeCHHH-HHHhHHHHH----------------------------HHHccCCcccccCCceeCC--CCCHHHHHHHHH
Confidence 479999996 789999999 9986 33 56666778877 999999999999
Q ss_pred HHhcCC-----------ccCCccchHHHHHHHHhHHHh
Q 010644 152 FMYSST-----------LSTTTPTALLDVLMAADKFEV 178 (505)
Q Consensus 152 fiYtg~-----------~~~~~~~~~~~ll~aA~~~~v 178 (505)
|+|.-. ..++. +++.+|+.||++|++
T Consensus 60 yc~~h~~~~~~~~~i~~w~vd~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 60 YFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 96 (96)
T ss_dssp HHHHHHHHHSCCSCCCCCCCCT-TTHHHHHHHHHHHTC
T ss_pred HHHHccccCCCcccCCCcccCH-HHHHHHHHHHHHhCc
Confidence 997643 23554 899999999999975
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.71 E-value=2.5e-05 Score=71.69 Aligned_cols=92 Identities=11% Similarity=0.249 Sum_probs=70.1
Q ss_pred cEEEEE---EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcc----cCCccEEEEecCC
Q 010644 68 STVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 140 (505)
Q Consensus 68 dv~~~v---~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----es~~~~v~l~~~~ 140 (505)
.|++.. ..|.+++.+ |..|..++. |+..... +.....|.|+ +
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~----------------------------ml~~~~~~~~~~~~~~~Iplp--n 56 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKN----------------------------YLNDMGDDDDEDDDEIVMPVP--N 56 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHH----------------------------HHHC-----------CEEECT--T
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHH----------------------------HHHhcCcccccccCCCceeeC--C
Confidence 345544 479999997 788999999 9875322 1223567776 9
Q ss_pred CCHHHHHHHHHHHhcCC-------------------------ccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 141 SEEAALMELLNFMYSST-------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 141 ~~~~~f~~ll~fiYtg~-------------------------~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
++..+++.+++|++.-. +.++. +++.+|+.||+||+|..|.+.|++.+..
T Consensus 57 V~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~ 131 (169)
T 3v7d_A 57 VRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAE 131 (169)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999997543 23453 7899999999999999999999999866
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.66 E-value=7.1e-05 Score=63.33 Aligned_cols=93 Identities=17% Similarity=0.239 Sum_probs=70.7
Q ss_pred cEEEEE--EEEEeeeeeeeccCc-cccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcc----cCCccEEEEecCC
Q 010644 68 STVLRV--KTVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 140 (505)
Q Consensus 68 dv~~~v--~~~~~hr~iLaa~S~-~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----es~~~~v~l~~~~ 140 (505)
-|++-| ..|..++..|+...+ +|.+ ||++... .....++-+ +
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~----------------------------~~~~~~~~~~~~d~~~~~fi---D 55 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYR----------------------------LCQADPDLDSDKDETGAYLI---D 55 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHH----------------------------HHTTCGGGGGGBCTTSCEEE---C
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhH----------------------------HHhcCCCCCcCCCCCceEEe---c
Confidence 456677 369999999987653 5566 7765421 113345655 7
Q ss_pred CCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 141 SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 141 ~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
-+|..|+.+|+|+.+|++.+...-....++.-|++|++++|++.|.+.+.+
T Consensus 56 Rdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 56 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp SCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 899999999999999999875433467899999999999999999987653
No 30
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.40 E-value=0.0015 Score=63.96 Aligned_cols=53 Identities=21% Similarity=0.231 Sum_probs=42.5
Q ss_pred cccc-eeeEEE-e--cCCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecCC
Q 010644 349 YRRF-VERAYK-Y--RPVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG 405 (505)
Q Consensus 349 pr~~-~~~ly~-~--~~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~~ 405 (505)
||+. .+.+|+ + ...+.+..|||.+++|.. ||.+|..|++++++|+|| ++||..
T Consensus 6 pr~~~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~ 65 (306)
T 3ii7_A 6 PRRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVY----ILGGSQ 65 (306)
T ss_dssp ----CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEE----EECCBS
T ss_pred CCccccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEE----EEeCCC
Confidence 4443 356777 2 237899999999999999 889999999999999999 999965
No 31
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.31 E-value=0.00012 Score=81.53 Aligned_cols=114 Identities=11% Similarity=0.010 Sum_probs=75.8
Q ss_pred hhhccCCChHHHHHHHhhhccccccCCCcChhhHhhhccCCCCCC--h---hHHHHHH------HHHhhhcCChhhHhhh
Q 010644 272 WARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDP--E---LASKVVL------ESLFFKAETPYRQRAL 340 (505)
Q Consensus 272 Wi~~~~~~~~~R~~~l~~~LL~~VRf~lls~~~L~~~~~~~~l~~--~---~~~~lv~------ea~~~~~~~~~~~~~l 340 (505)
|+.++ ...|.+.+ +.+++.+||++|.+.++......++... + .|.++.. +...+..
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 381 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLLE--------- 381 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEEE---------
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEec---------
Confidence 98876 56788888 8999999999999888877666554321 1 1221110 0000000
Q ss_pred hhhhhccccccce------eeEEE-e----cCCCeEEEEeCCCCeEEe---------ccccccceEEEee--CCeEeeec
Q 010644 341 AAEEANSTYRRFV------ERAYK-Y----RPVKVVEFELPRQQCVVY---------LDLKREECAHLFP--AGRIYSQA 398 (505)
Q Consensus 341 ~~~~t~~~pr~~~------~~ly~-~----~~~~~Ve~Ydp~~~~W~~---------l~~~R~~~~~~~~--~g~IY~~~ 398 (505)
.+. ..+|++. +.+|+ + ..++++.+|||.+++|.. ||.+|..|+++++ +|+||
T Consensus 382 -~~~--~p~rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly--- 455 (695)
T 2zwa_A 382 -CEC--PINRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL--- 455 (695)
T ss_dssp -CCC--TTCCBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE---
T ss_pred -cCC--CCCCceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE---
Confidence 011 1234443 35666 2 246789999999999986 3568999999999 99999
Q ss_pred ceeecCC
Q 010644 399 FHLGGQG 405 (505)
Q Consensus 399 ~viGG~~ 405 (505)
++||..
T Consensus 456 -v~GG~~ 461 (695)
T 2zwa_A 456 -LIGGRK 461 (695)
T ss_dssp -EECCBS
T ss_pred -EEcCCC
Confidence 999964
No 32
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.29 E-value=0.0013 Score=64.35 Aligned_cols=47 Identities=17% Similarity=0.182 Sum_probs=40.5
Q ss_pred eeEEEe------cCCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 354 ERAYKY------RPVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 354 ~~ly~~------~~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
+.+|+. ..++.++.|||.+++|.. ||.+|..|++++.+|+|| ++||.
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 164 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLY----AVGGY 164 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EECCE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEE----EEeCC
Confidence 456662 235689999999999998 889999999999999999 99996
No 33
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.23 E-value=0.0025 Score=62.24 Aligned_cols=47 Identities=17% Similarity=0.204 Sum_probs=40.9
Q ss_pred eeEEEe------cCCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 354 ERAYKY------RPVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 354 ~~ly~~------~~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
+.+|+. ...+.++.|||.+++|.. ||.+|..|++++++|+|| ++||.
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 117 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLY----AVGGF 117 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EEEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEE----EEcCC
Confidence 457762 246789999999999999 889999999999999999 99995
No 34
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.19 E-value=0.0032 Score=61.35 Aligned_cols=52 Identities=31% Similarity=0.277 Sum_probs=41.4
Q ss_pred cccc-eeeEEE-ec------CCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 349 YRRF-VERAYK-YR------PVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 349 pr~~-~~~ly~-~~------~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
||.. .+.+|+ ++ ..+.+.+|||.+++|.. +|.+|..|++++.+++|| ++||.
T Consensus 9 pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~----v~GG~ 71 (301)
T 2vpj_A 9 ARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIY----VIGGY 71 (301)
T ss_dssp ----CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCB
T ss_pred ccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEE----EEcCC
Confidence 4532 357777 22 36789999999999998 888999999999999999 99995
No 35
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.16 E-value=0.0015 Score=64.38 Aligned_cols=52 Identities=13% Similarity=0.004 Sum_probs=41.9
Q ss_pred CCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecCCc--cccceecccCC
Q 010644 362 VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQGF--FLSAHCNMDQQ 417 (505)
Q Consensus 362 ~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~~~--~l~~~~~~~~~ 417 (505)
.+.++.|||.+++|.. ||.+|..|++++.+|+|| ++||... .+.....+|+.
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRII----VAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EEEEECSSSEEEEEEEEETT
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEE----EEeccCCCCccceEEEEECC
Confidence 5789999999999999 889999999999999999 9999632 22233445554
No 36
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.15 E-value=0.0024 Score=62.46 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=37.1
Q ss_pred CCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 361 PVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 361 ~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
..+.++.|||.+++|.. ||.+|..|++++.+|+|| ++||.
T Consensus 116 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 158 (306)
T 3ii7_A 116 ALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIY----VCGGS 158 (306)
T ss_dssp CCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EECCE
T ss_pred EeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEE----EECCC
Confidence 35789999999999998 889999999999999999 99995
No 37
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.11 E-value=0.0043 Score=60.39 Aligned_cols=48 Identities=25% Similarity=0.306 Sum_probs=41.2
Q ss_pred eeEEEe------cCCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecCC
Q 010644 354 ERAYKY------RPVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG 405 (505)
Q Consensus 354 ~~ly~~------~~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~~ 405 (505)
+.+|+. ...+.++.||+.+++|.. ||.+|..|++++.+|+|| ++||..
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 169 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY----CLGGYD 169 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE----EECCBC
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE----EECCCC
Confidence 456762 236789999999999998 889999999999999999 999963
No 38
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.04 E-value=0.0025 Score=62.86 Aligned_cols=53 Identities=19% Similarity=0.097 Sum_probs=42.1
Q ss_pred CCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecCC---ccccceecccCCc
Q 010644 362 VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---FFLSAHCNMDQQS 418 (505)
Q Consensus 362 ~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~~---~~l~~~~~~~~~~ 418 (505)
.+.+++||+.+++|.. ||.+|..|++++.+|+|| ++||.. -.+.....+|+..
T Consensus 126 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 126 LDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIY----CLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp EEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEE----EECCEESSSCBCCCEEEEETTT
T ss_pred cceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEE----EEcCCCCCCCccceEEEEcCCC
Confidence 4679999999999998 889999999999999999 999962 1233344455543
No 39
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.00 E-value=0.0043 Score=60.92 Aligned_cols=48 Identities=17% Similarity=0.113 Sum_probs=41.4
Q ss_pred eeEEEe------cCCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecCC
Q 010644 354 ERAYKY------RPVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG 405 (505)
Q Consensus 354 ~~ly~~------~~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~~ 405 (505)
+.+|+. ...+.++.|||.+++|.. ||.+|..|++++.+++|| ++||..
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 178 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY----AVGGFD 178 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBC
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEE----EEeCCC
Confidence 467762 236789999999999999 889999999999999999 999963
No 40
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.99 E-value=0.0027 Score=62.66 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=37.3
Q ss_pred CCCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 361 PVKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 361 ~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
..+.++.|||.+++|.. ||.+|..|++++.+|+|| ++||.
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 215 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIV----IAGGV 215 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EEEEE
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEE----EEcCc
Confidence 36789999999999998 889999999999999999 99996
No 41
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.96 E-value=0.0031 Score=62.15 Aligned_cols=39 Identities=15% Similarity=-0.037 Sum_probs=36.9
Q ss_pred CCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 362 VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 362 ~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
.+.+++|||.+++|.. ||.+|..|++++.+|+|| ++||.
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 157 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVY----VIGGK 157 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCB
T ss_pred cceEEEECCCCCcEeECCCCCCcccceeEEEECCEEE----EEeCC
Confidence 5789999999999999 889999999999999999 99997
No 42
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.94 E-value=0.0041 Score=61.09 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=36.6
Q ss_pred CCeEEEEeCCCCeEEe---ccccccceEEEeeCCeEeeecceeecC
Q 010644 362 VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 362 ~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
.+.++.|||.+++|.. ||.+|..|++++++|+|| ++||.
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 130 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIY----AVGGS 130 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEE----EECCE
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEE----EEcCC
Confidence 5689999999999999 889999999999999999 99995
No 43
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=96.93 E-value=0.00042 Score=59.09 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=54.8
Q ss_pred EEEEeeeeeeeccCccccccCCCccccccchhhhHHHHHHHHhhhhhcccC--CcccCCccEEEEecCCCCHHHHHHHHH
Q 010644 74 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN--GMRESEQRYVTLRIHASEEAALMELLN 151 (505)
Q Consensus 74 ~~~~~hr~iLaa~S~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~--~~~es~~~~v~l~~~~~~~~~f~~ll~ 151 (505)
..|.+++. .|..|..++. |+.. .+.|+....|.|+ +++..+++.+++
T Consensus 27 ~~F~V~~~-~A~~S~tIk~----------------------------ml~~~~~~~e~~~~~Iplp--nV~s~iL~kVie 75 (112)
T 1vcb_B 27 HEFIVKRE-HALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCM 75 (112)
T ss_dssp CEEEEEHH-HHHTSHHHHH----------------------------HSSCC--------CEEECS--SCCHHHHHHHHH
T ss_pred CEEEECHH-HHHHhHHHHH----------------------------HHHhcCCcccccCCceeCC--CCCHHHHHHHHH
Confidence 47999999 4689999999 9985 2345545677777 999999999999
Q ss_pred HHhcCC-----------ccCCccchHHHHHHHHhHHHh
Q 010644 152 FMYSST-----------LSTTTPTALLDVLMAADKFEV 178 (505)
Q Consensus 152 fiYtg~-----------~~~~~~~~~~~ll~aA~~~~v 178 (505)
|++.-. ..++. +++.+|+.||++|++
T Consensus 76 yc~~h~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 76 YFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHSSCSSCCCCCCCCH-HHHHHHHHHHHHHTC
T ss_pred HHHHhhhccCCcCCCCCcccCH-HHHHHHHHHHHHhCc
Confidence 997533 23553 799999999999975
No 44
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.74 E-value=0.005 Score=61.58 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=40.0
Q ss_pred eeEEE--ecCCCeEEEEeCC--CCeEEe---cc-ccccceEEEeeCCeEeeecceeecC
Q 010644 354 ERAYK--YRPVKVVEFELPR--QQCVVY---LD-LKREECAHLFPAGRIYSQAFHLGGQ 404 (505)
Q Consensus 354 ~~ly~--~~~~~~Ve~Ydp~--~~~W~~---l~-~~R~~~~~~~~~g~IY~~~~viGG~ 404 (505)
+.||+ +...+.+.+||+. +++|.. || .+|..|++++++|+|| ++||.
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly----v~GG~ 74 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY----VFGGI 74 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE----EECCE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE----EEcCC
Confidence 46777 2335689999998 499998 78 7999999999999999 99997
No 45
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=96.74 E-value=0.002 Score=56.92 Aligned_cols=113 Identities=19% Similarity=0.268 Sum_probs=72.1
Q ss_pred CCeEeeecceeecC---CccccceecccCCcceeEeEEEEeeecCCCceeeeeeeeeeecCCchhhhc-cccceeEecCC
Q 010644 391 AGRIYSQAFHLGGQ---GFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVS-KYKGNYTFTGG 466 (505)
Q Consensus 391 ~g~IY~~~~viGG~---~~~l~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~r~~~~~~f~~-~~~~~~~~tg~ 466 (505)
+..|+|..|.+||+ .|.+..--+-+....-...++++.+...+.-++.+.+.+..-+........ .....|.|+.+
T Consensus 28 g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~w~v~a~f~l~llnq~~~~~~~~~~~~~~~F~~~ 107 (145)
T 3ivv_A 28 GEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQG 107 (145)
T ss_dssp TCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEECSSSEEEEEEEEEEECTTSCEEEEEECSSCEEEETT
T ss_pred CCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCCeEEEEEEEcCCCCCcEEEEEEEEEEecCCCceeeecccceEEecCC
Confidence 56799999999996 787753332222112245677776644444467777777776643322221 11245777765
Q ss_pred eeeeeecCCCCCceeEEecCcceeecceeEEEEeeeeeC
Q 010644 467 KAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIRQ 505 (505)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~ 505 (505)
.++||... ++|..+.+..+.|-+|+.++++++++|++
T Consensus 108 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 108 KDWGFKKF--IRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp CEEEEEEE--EEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred CCcCHHHe--EEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 56676544 55665554567899999999999999974
No 46
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.61 E-value=0.013 Score=58.40 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=36.4
Q ss_pred CCeEEEEeCCCCeEEe---cc-ccccceEEEeeCCeEeeecceeecCC
Q 010644 362 VKVVEFELPRQQCVVY---LD-LKREECAHLFPAGRIYSQAFHLGGQG 405 (505)
Q Consensus 362 ~~~Ve~Ydp~~~~W~~---l~-~~R~~~~~~~~~g~IY~~~~viGG~~ 405 (505)
++.+++|||.+++|.. |+ .+|..|++++.+|+|| ++||..
T Consensus 85 ~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 128 (357)
T 2uvk_A 85 FNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAY----VTGGVN 128 (357)
T ss_dssp CCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEE----EEECCC
T ss_pred eccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEE----EEeCcC
Confidence 5789999999999999 66 8899999999999999 999964
No 47
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.42 E-value=0.0072 Score=67.07 Aligned_cols=41 Identities=15% Similarity=-0.019 Sum_probs=37.7
Q ss_pred CCCeEEEEeCCCCeEEe---ccccccceEEEee-CCeEeeecceeecCC
Q 010644 361 PVKVVEFELPRQQCVVY---LDLKREECAHLFP-AGRIYSQAFHLGGQG 405 (505)
Q Consensus 361 ~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~-~g~IY~~~~viGG~~ 405 (505)
.+++++.||+.+++|.. ||.+|..|+++++ +|+|| ++||..
T Consensus 466 ~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iy----v~GG~~ 510 (695)
T 2zwa_A 466 GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVL----ILGGVT 510 (695)
T ss_dssp BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEE----EECCBC
T ss_pred ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEE----EECCCC
Confidence 46889999999999999 8999999999996 99999 999974
No 48
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.10 E-value=0.0087 Score=55.97 Aligned_cols=93 Identities=17% Similarity=0.243 Sum_probs=69.9
Q ss_pred cEEEEE--EEEEeeeeeeeccC-ccccccCCCccccccchhhhHHHHHHHHhhhhhcccCCcc----cCCccEEEEecCC
Q 010644 68 STVLRV--KTVHISSPILAAKS-PFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 140 (505)
Q Consensus 68 dv~~~v--~~~~~hr~iLaa~S-~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----es~~~~v~l~~~~ 140 (505)
-|.+-| ..|...+..|.... .+|.+ ||++... .....++-+ +
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~----------------------------lfs~~~~~~~~~De~geyFI---D 61 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYR----------------------------LCQADPDLDSDKDETGAYLI---D 61 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHH----------------------------HHSCCCC----BCTTCCEEE---C
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHH----------------------------HhcCccccCcccCCCccEEe---c
Confidence 455667 36899999997654 35566 7765321 112345555 6
Q ss_pred CCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 141 SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 141 ~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
-+|..|+.||+|+.+|++.+...-....++.-|++|+|+.|.+.|.+.|.+
T Consensus 62 RDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 62 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp SCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 899999999999999999876434457899999999999999999988866
No 49
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=95.81 E-value=0.0098 Score=59.07 Aligned_cols=112 Identities=18% Similarity=0.252 Sum_probs=70.8
Q ss_pred CCeEeeecceeecC---CccccceecccCCcceeEeEEEEeeecCCCceeeeeeeeeeecCCchhhhcc-ccceeEecCC
Q 010644 391 AGRIYSQAFHLGGQ---GFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIKPTEEYVSK-YKGNYTFTGG 466 (505)
Q Consensus 391 ~g~IY~~~~viGG~---~~~l~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~r~~~~~~f~~~-~~~~~~~tg~ 466 (505)
+..++|..|.+||. .|.+..--+-+....-...++++.....+..++.+.+.+..-+........+ ....|+|+.+
T Consensus 24 ~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~~~~~~v~a~~~~~l~~~~~~~~~~~~~~~~~~F~~~ 103 (312)
T 3hqi_A 24 GEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQG 103 (312)
T ss_dssp TCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEECCC-CEEEEEEEEEECTTSCEEEEEECSSCEEECTT
T ss_pred CCeEeeCCcccCCCCCceEEEEEECCCCCccCCCcEEEEEEEcCCCCCcEEEEEEEEEEeCCCCcccccccCCceeCCCC
Confidence 67899999999995 8877432221111122346677765443344577777777776433332222 2467888866
Q ss_pred eeeeeecCCCCCceeEEecCcceeecceeEEEEeeeee
Q 010644 467 KAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~ 504 (505)
.++||.+. ++|..+....+.|-+||.++++++++|.
T Consensus 104 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~i~~~v~v~ 139 (312)
T 3hqi_A 104 KDWGFKKF--IRRGFLLDEANGLLPDDKLTLFCEVSVV 139 (312)
T ss_dssp CEEEEEEE--EEHHHHTCGGGCCCGGGCEEEEEEEEEE
T ss_pred CCcCHHHh--ccHHHhhccccCeecCCEEEEEEEEEEE
Confidence 67777665 6777776666779999999999999986
No 50
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.44 E-value=0.02 Score=62.75 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=46.5
Q ss_pred eeEEEec--CCCeEEEEeCCCCeEEe---ccccccceEEEee-CCeEeeecceeecC-C--ccccceecccCCcc
Q 010644 354 ERAYKYR--PVKVVEFELPRQQCVVY---LDLKREECAHLFP-AGRIYSQAFHLGGQ-G--FFLSAHCNMDQQSS 419 (505)
Q Consensus 354 ~~ly~~~--~~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~-~g~IY~~~~viGG~-~--~~l~~~~~~~~~~~ 419 (505)
+.||+.+ ....+++|||.+++|.. |+.+|..|+++++ +|+|| ++||. . ..+.....+|+...
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iy----v~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVF----TIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEE----EECCCCCSSSCCCCEEEEETTTT
T ss_pred CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEE----EEeCcccCCcccccceEeCCCCC
Confidence 5677732 34589999999999999 8899999999998 99999 99994 1 13334445666433
No 51
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.19 E-value=0.031 Score=47.57 Aligned_cols=93 Identities=10% Similarity=0.051 Sum_probs=65.1
Q ss_pred cEEEEE--EEEEeeeeeeeccCc-cccccCCCccccccchhhhHHHHHHHHhhhhhcccCCc-ccCCccEEEEecCCCCH
Q 010644 68 STVLRV--KTVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGM-RESEQRYVTLRIHASEE 143 (505)
Q Consensus 68 dv~~~v--~~~~~hr~iLaa~S~-~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~es~~~~v~l~~~~~~~ 143 (505)
-|++-| ..|...+..|..... .+.+ ||++.. ......++-+ +-+|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~----------------------------l~~~~~~~~~~~g~~Fi---DRdp 54 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSR----------------------------LTEGMLNYDPVLNEYFF---DRHP 54 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTT----------------------------CCTTSTTEETTTTEEEE---CSCT
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHH----------------------------HhcCCCCCCCCCCcEEE---ecCh
Confidence 356677 368888888876543 3444 776532 1223456666 6899
Q ss_pred HHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhH-H-HHhhhccc
Q 010644 144 AALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-R-YCSRLLRN 191 (505)
Q Consensus 144 ~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~-~-~C~~~L~~ 191 (505)
..|+.+|+|+.+|++.+...-.+..++.-|++|+|++.. . .|...+.+
T Consensus 55 ~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 55 GVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp TTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGGBCGGGSHHHHS
T ss_pred HHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 999999999999999876434578999999999998866 3 34444444
No 52
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=94.96 E-value=0.057 Score=47.85 Aligned_cols=111 Identities=10% Similarity=0.123 Sum_probs=65.8
Q ss_pred CeEeeecceeecCCccccceecccCC-cceeEeEEEEeeecCC---CceeeeeeeeeeecCCchhhhccccceeEecC-C
Q 010644 392 GRIYSQAFHLGGQGFFLSAHCNMDQQ-SSFHCFGLFLGMQEKG---SVSFAVDYEFAARIKPTEEYVSKYKGNYTFTG-G 466 (505)
Q Consensus 392 g~IY~~~~viGG~~~~l~~~~~~~~~-~~~~~~g~~~g~~~~~---~~~~~~~~~~~~r~~~~~~f~~~~~~~~~~tg-~ 466 (505)
..+||..|.+||..|.+..--+=+.. ..-...++++-+.... .-++.+++.+..-+.....--......+.|.. .
T Consensus 33 ~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~~~~~~~~~~~~~~~~~F~~~~ 112 (155)
T 2foj_A 33 ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKE 112 (155)
T ss_dssp SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEECCSSCGGGCEEEEEEEEEETTB
T ss_pred CceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEEcCCCCcceEEeccEEEeCCCC
Confidence 68999999999999988543321111 1224567777653221 12466667766655322221111234566763 4
Q ss_pred eeeeeecCCCCCceeEEecCcceeecceeEEEEeeeee
Q 010644 467 KAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~ 504 (505)
.+.||... ++|..+....+.|.+||.|+++|+++|.
T Consensus 113 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~Ie~~V~V~ 148 (155)
T 2foj_A 113 NDWGFSNF--MAWSEVTDPEKGFIDDDKVTFEVFVQAD 148 (155)
T ss_dssp CEEEEEEE--EEHHHHTCTTTSSCBTTBEEEEEEEEEC
T ss_pred CCEeECCe--EEHHHhcCcCCCceECCEEEEEEEEEEe
Confidence 45566544 5566555445679999999999999985
No 53
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.09 E-value=0.094 Score=45.20 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=42.6
Q ss_pred ccEEEEecCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhH-HHHh
Q 010644 131 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-RYCS 186 (505)
Q Consensus 131 ~~~v~l~~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~-~~C~ 186 (505)
..++-+ +=++..|+.||+|+.+|++.+.....+..++.-|++|+|+.+. +.||
T Consensus 52 ~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 52 TKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 105 (124)
T ss_dssp SCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHH
T ss_pred CCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 455655 6799999999999999999876434578999999999999874 4443
No 54
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.34 E-value=0.051 Score=59.43 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=35.8
Q ss_pred CCeEEEEeCCCCeEEe---ccccccceEEEee--CCeEeeecceeecC
Q 010644 362 VKVVEFELPRQQCVVY---LDLKREECAHLFP--AGRIYSQAFHLGGQ 404 (505)
Q Consensus 362 ~~~Ve~Ydp~~~~W~~---l~~~R~~~~~~~~--~g~IY~~~~viGG~ 404 (505)
+..+++|||.+++|.. |+.+|..|+++++ +|+|| ++||.
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~----v~GG~ 530 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVF----NGGGG 530 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEE----EEECC
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEE----ecCCC
Confidence 5789999999999998 8899999998887 99999 99995
No 55
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=93.19 E-value=0.077 Score=44.33 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=42.4
Q ss_pred ccEEEEecCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhH-HHHh
Q 010644 131 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-RYCS 186 (505)
Q Consensus 131 ~~~v~l~~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~-~~C~ 186 (505)
..++-+ +=+|..|+.+|+|+-+|++.+.....+..++.-|++|+|+.+. +.|+
T Consensus 39 ~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 39 TQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp GTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred CCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 456666 6799999999999999999875434578899999999999874 4443
No 56
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=92.48 E-value=0.13 Score=45.30 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=42.9
Q ss_pred ccEEEEecCCCCHHHHHHHHHHHhcCCccCCccchHHHHHHHHhHHHhhhhH-HHHh
Q 010644 131 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-RYCS 186 (505)
Q Consensus 131 ~~~v~l~~~~~~~~~f~~ll~fiYtg~~~~~~~~~~~~ll~aA~~~~v~~l~-~~C~ 186 (505)
..++-+ +=++..|+.||+|+.+|++.+.....+..++.-|++|+|+.+. +.||
T Consensus 74 ~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC 127 (140)
T 2nz0_B 74 TKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 127 (140)
T ss_dssp TTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTT
T ss_pred CCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 456666 6899999999999999999876434578999999999999874 4443
No 57
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.75 E-value=0.19 Score=41.60 Aligned_cols=53 Identities=11% Similarity=0.072 Sum_probs=42.2
Q ss_pred ccEEEEecCCCCHHHHHHHHHHHhc-CCccCCccchHHHHHHHHhHHHhhhhH-HHHh
Q 010644 131 QRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLMAADKFEVASCM-RYCS 186 (505)
Q Consensus 131 ~~~v~l~~~~~~~~~f~~ll~fiYt-g~~~~~~~~~~~~ll~aA~~~~v~~l~-~~C~ 186 (505)
..++-+ +=+|..|+.+|+|+.+ |++.+.....+..++.-|++|+|+++. +.|.
T Consensus 41 ~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 41 RNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENAFERYR 95 (100)
T ss_dssp TTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 456666 6799999999999999 899875434578899999999998755 4443
No 58
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=90.87 E-value=0.28 Score=52.32 Aligned_cols=109 Identities=10% Similarity=0.139 Sum_probs=67.6
Q ss_pred eEeeecceeecCCccccceecccCCc-ceeEeEEEEeeecCC-C--ceeeeeeeeeeecCCch-hhhccccceeEec-CC
Q 010644 393 RIYSQAFHLGGQGFFLSAHCNMDQQS-SFHCFGLFLGMQEKG-S--VSFAVDYEFAARIKPTE-EYVSKYKGNYTFT-GG 466 (505)
Q Consensus 393 ~IY~~~~viGG~~~~l~~~~~~~~~~-~~~~~g~~~g~~~~~-~--~~~~~~~~~~~r~~~~~-~f~~~~~~~~~~t-g~ 466 (505)
.+||..|.+||..|.+..--+-+... .....++++-+.... + -++.+.+.+..-+...+ ..+. ....+.|. .+
T Consensus 46 ~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l~n~~~~~~~~~-~~~~~~F~~~~ 124 (522)
T 2f1z_A 46 SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFS-RRISHLFFHKE 124 (522)
T ss_dssp CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEECCTTCGGGCEE-EECCEEECGGG
T ss_pred ceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEEEcCCCCcccee-ccceeEecCCC
Confidence 89999999999999885322211100 223456777553221 1 12667777776653322 2222 24556776 45
Q ss_pred eeeeeecCCCCCceeEEecCcceeecceeEEEEeeeee
Q 010644 467 KAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~ 504 (505)
..+|+.+. ++|..+....+.|..|+.++++++++|.
T Consensus 125 ~~wG~~~F--i~~~~L~~~~~g~L~nD~l~i~~~V~v~ 160 (522)
T 2f1z_A 125 NDWGFSNF--MAWSEVTDPEKGFIDDDKVTFEVFVQAD 160 (522)
T ss_dssp CEEEESSS--SBHHHHSCGGGSSCBTTBEEEEEEEEEC
T ss_pred CCcchhhe--eEhhHhcCcccCcccCCcEEEEEEeecc
Confidence 56788665 7888887666778889999999998874
No 59
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=90.32 E-value=0.17 Score=46.67 Aligned_cols=109 Identities=18% Similarity=0.182 Sum_probs=55.3
Q ss_pred eEeeeccee--ecCCccccceecccCCcceeEeEEEEeeecCCC-----ceeeeeeeeeeecCCchhhhcccc----cee
Q 010644 393 RIYSQAFHL--GGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGS-----VSFAVDYEFAARIKPTEEYVSKYK----GNY 461 (505)
Q Consensus 393 ~IY~~~~vi--GG~~~~l~~~~~~~~~~~~~~~g~~~g~~~~~~-----~~~~~~~~~~~r~~~~~~f~~~~~----~~~ 461 (505)
.|||..|.+ ||+.|.+..--+=+....-...++++.+..... -++.+.+.+..-+......++... ..+
T Consensus 66 ~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~W~~~a~~~l~lldq~~~~~~~~~~~~~~~~~ 145 (192)
T 1ca9_A 66 AIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSS 145 (192)
T ss_dssp CEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCTTSSCCEEEEECCCTTSG
T ss_pred eEECceEEeCCCCeEEEEEEEeCCCCCCCCCEEEEEEEEccCCCCCcCCCceEEEEEEEEECCCCCceeeEeeccCCchh
Confidence 499999999 999998853322111111234677776532211 135555666555432221111000 011
Q ss_pred Eec---C--CeeeeeecCCCCCceeEEecCcceeecceeEEEEeeeee
Q 010644 462 TFT---G--GKAVGYRNLFGIPWTAFMADDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 462 ~~t---g--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~ 504 (505)
+|. + +.++||... ++|..+-+ .+.|..|+.++++++++|.
T Consensus 146 ~f~rp~~~~~~~wG~~~F--i~~~~L~~-~~gyl~dD~l~I~~~V~V~ 190 (192)
T 1ca9_A 146 SFQRPVNDMNIASGCPLF--CPVSKMEA-KNSYVRDDAIFIKAIVDLT 190 (192)
T ss_dssp GGSCCSSSBCCCEEEEEE--EETHHHHS-SCSSCBTTEEEEEEEECCT
T ss_pred hhcCCccCCCCCcChhhe--eEHHHhhh-ccCCEeCCEEEEEEEEEec
Confidence 121 0 112343222 33333322 4668899999999999985
No 60
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=89.51 E-value=0.21 Score=45.46 Aligned_cols=104 Identities=15% Similarity=0.231 Sum_probs=55.0
Q ss_pred eEeeecceee--cCCccccceecccCCcceeEeEEEEeeecCC-----CceeeeeeeeeeecCCchh-hhccc----cce
Q 010644 393 RIYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQEKG-----SVSFAVDYEFAARIKPTEE-YVSKY----KGN 460 (505)
Q Consensus 393 ~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~g~~~~~-----~~~~~~~~~~~~r~~~~~~-f~~~~----~~~ 460 (505)
.|+|..|.+| |+.|.+..--+=+....-...++++.+.... .-++.+.+.+..-+...+. -++.. ...
T Consensus 47 ~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~v~a~~~l~Lldq~~~~~~~~~~~~~~~~~ 126 (178)
T 4gjh_A 47 SVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKADPNS 126 (178)
T ss_dssp CEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSSCCCEEEEEECCTTSSCCCEEEEEECCTTC
T ss_pred EEECCCeEeCCCCeEEEEEEEECCCCCCCCCEEEEEEEEecCCCCcccCCceEEEEEEEEEcCCCCcceeEEeeccCCcc
Confidence 6999999999 9999874322211111123567777652211 1135555666555432111 11000 011
Q ss_pred eEecC-----CeeeeeecCCCCCceeEEe------cCcceeecceeEEEEeeeee
Q 010644 461 YTFTG-----GKAVGYRNLFGIPWTAFMA------DDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 461 ~~~tg-----~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~l~~~~~~~ 504 (505)
+.|.. +.++| |+.||. -++.|-+|+.++++++.+|.
T Consensus 127 ~~F~~p~~~~~~~wG--------~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~ 173 (178)
T 4gjh_A 127 SSFKRPDGEMNIASG--------CPRFVSHSTLENSKNTYIKDDTLFLKVAVDLT 173 (178)
T ss_dssp GGGSCCSSSBCCCEE--------EEEEEEHHHHHCTTCCSSBTTBEEEEEEECCT
T ss_pred ccccCCcccccCCcC--------hhheeEHHHhhccccCcCcCCEEEEEEEEEec
Confidence 22221 11223 455665 23779999999999999875
No 61
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=86.53 E-value=0.48 Score=42.32 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=52.7
Q ss_pred Eeeecce--eecCCccccceecccCCcceeEeEEEEeeecCC-----CceeeeeeeeeeecCCchhhhccccc----eeE
Q 010644 394 IYSQAFH--LGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKG-----SVSFAVDYEFAARIKPTEEYVSKYKG----NYT 462 (505)
Q Consensus 394 IY~~~~v--iGG~~~~l~~~~~~~~~~~~~~~g~~~g~~~~~-----~~~~~~~~~~~~r~~~~~~f~~~~~~----~~~ 462 (505)
|||..|. +||+.|.+...-+=+....-...++++.+.... .-++.+.+.+..-+.....-+..... .+.
T Consensus 43 i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~w~~~~~~~l~ll~q~~~~~~~~~~~~~~~~~~ 122 (168)
T 1d00_A 43 IFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSS 122 (168)
T ss_dssp EECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCTTSSCCEEEEECCCTTSGG
T ss_pred EECCCeecCCCCEEEEEEEEeCCCCCCCCcEEEEEEEEecCCCCccCCCceEEEEEEEEECCCCCccceeccccCcchhh
Confidence 8888885 799999875433211111123467777653211 11355556655554322111111000 112
Q ss_pred ecC-----CeeeeeecCCCCCceeEEe----cCc-ceeecceeEEEEeeeee
Q 010644 463 FTG-----GKAVGYRNLFGIPWTAFMA----DDS-IYFINGNLHLRAELTIR 504 (505)
Q Consensus 463 ~tg-----~~~~~~~~~~~~~~~~~~~----~~~-~~~i~~~~~l~~~~~~~ 504 (505)
|.. +.++| |+.||. .++ .|.+|+.|+++++++|.
T Consensus 123 f~~p~~~~~~~~G--------~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 123 FQRPVNDMNIASG--------CPLFCPVSKMEAKNSYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp GSCCSSSBCCCEE--------EEEEEETTTTTSSSSSSBTTEEEEEEEECCT
T ss_pred ccCCCcCCCCCcC--------cceEeEHHHhcccCCceeCCEEEEEEEEEec
Confidence 221 11233 445554 232 68899999999999885
No 62
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=80.64 E-value=5.2 Score=35.08 Aligned_cols=111 Identities=21% Similarity=0.262 Sum_probs=53.8
Q ss_pred eEeeecceee--cCCccccceeccc-CCcceeEeEEEEeee--cCCC---ceeeeeeeeeeecCCchhhhccccceeEec
Q 010644 393 RIYSQAFHLG--GQGFFLSAHCNMD-QQSSFHCFGLFLGMQ--EKGS---VSFAVDYEFAARIKPTEEYVSKYKGNYTFT 464 (505)
Q Consensus 393 ~IY~~~~viG--G~~~~l~~~~~~~-~~~~~~~~g~~~g~~--~~~~---~~~~~~~~~~~r~~~~~~f~~~~~~~~~~t 464 (505)
.|+|..|.+| |+.|.+...-+=+ ........++++.+. +... -++.+.+.+..-+. .+.-.++ .-.+.++
T Consensus 28 ~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a~~~l~lldq-~~~~~~~-~~~~~~~ 105 (160)
T 1lb6_A 28 VIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQ-SEAPVRQ-NHEEIMD 105 (160)
T ss_dssp EEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCCSEEEEEECCC-SCTTSCC-CEEEEEE
T ss_pred EEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCceeeeEEEEEEcC-CCccccc-cceEEee
Confidence 7999999999 9988775432211 111123456666542 2111 12444455555442 2221111 1122332
Q ss_pred CCeee-------eeecCCCCCceeEEe----cCcceeecceeEEEEeeeeeC
Q 010644 465 GGKAV-------GYRNLFGIPWTAFMA----DDSIYFINGNLHLRAELTIRQ 505 (505)
Q Consensus 465 g~~~~-------~~~~~~~~~~~~~~~----~~~~~~i~~~~~l~~~~~~~~ 505 (505)
..... ...|..+--|+.||. ..+.|-.|+.++++++++|+.
T Consensus 106 ~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 106 AKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp CCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred cCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 11000 001111223455666 345688899999999999873
No 63
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=77.99 E-value=5.5 Score=37.48 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=54.6
Q ss_pred eEeeecceee--cCCccccceecccCCcceeEeEEEEeee--cCCC---ceeeeeeeeeeecCCchhhhccccceeEecC
Q 010644 393 RIYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQ--EKGS---VSFAVDYEFAARIKPTEEYVSKYKGNYTFTG 465 (505)
Q Consensus 393 ~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~g~~--~~~~---~~~~~~~~~~~r~~~~~~f~~~~~~~~~~tg 465 (505)
.|||..|.+| |+.|.+...-+=+....-...++++.+. +..+ -++.+.+.|...+...... .-..+++.
T Consensus 99 ~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~Wp~~a~~~l~lldq~~~~~----~~~~~~~~ 174 (228)
T 1flk_A 99 SLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRR----HLGDAFKP 174 (228)
T ss_dssp CEECCCEESSTTSCEECEEEETTCCGGGTTTEEEEEECCBCCTTTTSSCSSCCCCEEEEECCCSSSCC----CEEEEECC
T ss_pred eEECceEEeCCCCcEEEEEEEcCCCCCCCCCEEEEEEEEecCCccccCCCcEEEEEEEEEEcCCCCcc----ceeeeecC
Confidence 7999999999 8888774322211111123467777542 2211 1344555555544221100 00112221
Q ss_pred Ceee-eee-----cCCCCCceeEEe----cCcceeecceeEEEEeeeee
Q 010644 466 GKAV-GYR-----NLFGIPWTAFMA----DDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 466 ~~~~-~~~-----~~~~~~~~~~~~----~~~~~~i~~~~~l~~~~~~~ 504 (505)
..+. .+. ...+--|+.||. .++.|-.|+.++++++++|.
T Consensus 175 ~~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~ 223 (228)
T 1flk_A 175 DPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 223 (228)
T ss_dssp CTTCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCT
T ss_pred CCccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEcc
Confidence 1000 010 011334566776 35668899999999999874
No 64
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=74.89 E-value=6.1 Score=36.34 Aligned_cols=110 Identities=14% Similarity=0.186 Sum_probs=53.8
Q ss_pred CCeEeeecceee--cCCccccceecccCCcceeEeEEEEeeecC--C---CceeeeeeeeeeecCCchhhhccccceeEe
Q 010644 391 AGRIYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQEK--G---SVSFAVDYEFAARIKPTEEYVSKYKGNYTF 463 (505)
Q Consensus 391 ~g~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~g~~~~--~---~~~~~~~~~~~~r~~~~~~f~~~~~~~~~~ 463 (505)
+..|+|..|.+| |+.|.+..--+=+....-...++++.+... . +-++.+.+.|..-+..... ..-..++
T Consensus 61 g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~~lSlyL~l~~g~~D~~l~wp~~a~~~l~Lldq~~~~----~~~~~~~ 136 (198)
T 4ghu_A 61 TLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR----RHLGDAF 136 (198)
T ss_dssp SCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCCSTTC----CCEEEEE
T ss_pred CcEEECCCeEECCCCcEEEEEEEeCCCCCCCCCeEEEEEEecCCccCCCCCceEEEEEEEEEEcCCCCc----cceEEEe
Confidence 357999999999 999877432221111112345666654321 1 1124444444444421110 0111112
Q ss_pred cCCe-eeeeecCC-----CCCceeEEe----cCcceeecceeEEEEeeeee
Q 010644 464 TGGK-AVGYRNLF-----GIPWTAFMA----DDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 464 tg~~-~~~~~~~~-----~~~~~~~~~----~~~~~~i~~~~~l~~~~~~~ 504 (505)
+-.. +..+..++ +--|+.||. .++.|-.|+.++++++++|.
T Consensus 137 ~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~ 187 (198)
T 4ghu_A 137 KPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (198)
T ss_dssp CCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCT
T ss_pred ecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEec
Confidence 1100 00010010 223566776 24668899999999999885
No 65
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=69.44 E-value=8.9 Score=34.90 Aligned_cols=108 Identities=15% Similarity=0.215 Sum_probs=51.8
Q ss_pred eEeeecceee--cCCccccceecccCCcceeEeEEEEeee--cCCC---ceeeeeeeeeeecCCchhhhccccceeEecC
Q 010644 393 RIYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQ--EKGS---VSFAVDYEFAARIKPTEEYVSKYKGNYTFTG 465 (505)
Q Consensus 393 ~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~g~~--~~~~---~~~~~~~~~~~r~~~~~~f~~~~~~~~~~tg 465 (505)
.|||..|.+| |+.|.+...-+=+....-...++++.+. +..+ -++.+.+.|...+...... .-..+++.
T Consensus 63 ~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a~~~l~lldq~~~~~----~~~~~~~~ 138 (192)
T 2gkw_A 63 SLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRR----HLGDAFKP 138 (192)
T ss_dssp CEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCCSTTCC----CEEEEECC
T ss_pred eEEcccEEECCCCcEEEEEEEeCCCCCCCCCEEEEEEEEecCCCCccCCCcEEEEEEEEEECCCCCcc----ceEEEEec
Confidence 4999999999 8888764321111001123456777542 2211 1344455555544221100 00111211
Q ss_pred Ceee-eeecC-----CCCCceeEEe----cCcceeecceeEEEEeeeee
Q 010644 466 GKAV-GYRNL-----FGIPWTAFMA----DDSIYFINGNLHLRAELTIR 504 (505)
Q Consensus 466 ~~~~-~~~~~-----~~~~~~~~~~----~~~~~~i~~~~~l~~~~~~~ 504 (505)
.... .+..+ .+--|+.||. .++.|-.|+.+++|++++|.
T Consensus 139 ~~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 139 DPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (192)
T ss_dssp CTTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCT
T ss_pred CCCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcC
Confidence 0000 00000 1122455666 24568899999999999874
No 66
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.34 E-value=3.9 Score=33.50 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=30.1
Q ss_pred CccCCccchHHHHHHHHhHHHhhhhHHHHhhhccc
Q 010644 157 TLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 191 (505)
Q Consensus 157 ~~~~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~ 191 (505)
.-.++ ++|.++++..|+.|+++.|.+.|.+|+..
T Consensus 5 ~~~L~-~~NCl~i~~~A~~~~~~~L~~~a~~fi~~ 38 (105)
T 2eqx_A 5 SSGVQ-VGNCLQVMWLADRHSDPELYTAAKHCAKT 38 (105)
T ss_dssp CCCCC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hccCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34466 49999999999999999999999999987
No 67
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=63.00 E-value=5.2 Score=32.31 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.6
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhcc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARY 230 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf 230 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.+++
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETSL 109 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhhC
Confidence 57789999999999988 99999999999998763
No 68
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=52.47 E-value=23 Score=33.77 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=63.2
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhccccccccchhhcCCCHHHHHHhhcCCCccccchhhHHHHHHHh
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKW 272 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf~~v~~~~~eFl~L~~~~L~~LL~sd~L~V~sE~~V~~avl~W 272 (505)
.++.+|+..++..|..+ +++.|.+.|.+|+.+++.. . ....++.-... .+-.++.+.+.++
T Consensus 106 ~i~~~~v~~ll~~A~~l----~i~~L~~~c~~~L~~~l~~----~---------n~~~i~~~A~~--~~~~~L~~~~~~~ 166 (279)
T 3i3n_A 106 RVSTGSVHEVLELADRF----LLIRLKEFCGEFLKKKLHL----S---------NCVAIHSLAHM--YTLSQLALKAADM 166 (279)
T ss_dssp EEETTTHHHHHHHHHHT----TCHHHHHHHHHHHHHHCCT----T---------THHHHHHHHHH--TTCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHH----CcHHHHHHHHHHHHHcCCc----c---------hHHHHHHHHHH--cCcHHHHHHHHHH
Confidence 47789999999999987 9999999999999876432 1 11111110000 1234566777778
Q ss_pred hhccCCChHHHHHHHhhhccccccCCCcChhhHhhhccCCCCC
Q 010644 273 ARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD 315 (505)
Q Consensus 273 i~~~~~~~~~R~~~l~~~LL~~VRf~lls~~~L~~~~~~~~l~ 315 (505)
+..+ + ..+...=.|..++.+.|.+++.++.+.
T Consensus 167 i~~~----------f-~~v~~~~~f~~L~~~~l~~lL~~d~L~ 198 (279)
T 3i3n_A 167 IRRN----------F-HKVIQDEEFYTLPFHLIRDWLSDLEIT 198 (279)
T ss_dssp HHHT----------H-HHHTTSSGGGGSCHHHHHHHHTCSSCC
T ss_pred HHHH----------H-HHHhcCcChhcCCHHHHHHHhcCcCCC
Confidence 7766 2 345555567788999999998887764
No 69
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=51.08 E-value=7.5 Score=33.07 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=32.4
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhcccc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKD 232 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf~~ 232 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+..++..
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKFLD 135 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCCSC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhccc
Confidence 57889999999999988 9999999999999988753
No 70
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=46.47 E-value=14 Score=30.68 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.8
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 229 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~n 229 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.++
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57889999999999987 9999999999999765
No 71
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=45.37 E-value=8.8 Score=32.59 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=29.0
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhcccccc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDIS 234 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf~~v~ 234 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999987 999999999999998876543
No 72
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=42.59 E-value=11 Score=32.85 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=29.3
Q ss_pred CCccchHHHHHHHHhHHHhhhhHHHHhhhcccCcc
Q 010644 160 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 194 (505)
Q Consensus 160 ~~~~~~~~~ll~aA~~~~v~~l~~~C~~~L~~~~l 194 (505)
++ ++++.+++..|+.|+++.|++.|.+|+.+ +.
T Consensus 132 l~-~~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~ 164 (172)
T 3htm_A 132 LS-VENAAEILILADLHSADQLKTQAVDFINY-HA 164 (172)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CC-HHHHHHHHHHHHHhCcHHHHHHHHHHHHH-HH
Confidence 45 48999999999999999999999999987 44
No 73
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=40.04 E-value=30 Score=36.54 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=40.2
Q ss_pred CccEEEEecCCCCHHHHHHHHHHHhc-CCccCCccchHHHHHHHHhHHHhhhhH
Q 010644 130 EQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLMAADKFEVASCM 182 (505)
Q Consensus 130 ~~~~v~l~~~~~~~~~f~~ll~fiYt-g~~~~~~~~~~~~ll~aA~~~~v~~l~ 182 (505)
..++.-+ |=+|..|+.+|+|+.+ |++.....-....+..-|++|+++++.
T Consensus 91 ~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 91 LRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred CCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCCHHH
Confidence 3456666 7899999999999999 999875433467788999999998765
No 74
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=38.78 E-value=19 Score=29.28 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=28.3
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHh
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 227 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~ 227 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999987 99999999999985
No 75
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=38.56 E-value=14 Score=30.39 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=27.8
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 229 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~n 229 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 57889999999999988 9999999999998765
No 76
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=38.02 E-value=21 Score=29.29 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=28.3
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHh
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 227 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~ 227 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999988 99999999999985
No 77
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=34.58 E-value=30 Score=28.42 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=29.5
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 229 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~n 229 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHh
Confidence 57789999999999988 9999999999998753
No 78
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=30.96 E-value=35 Score=27.76 Aligned_cols=30 Identities=7% Similarity=0.131 Sum_probs=27.4
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHH
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 226 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI 226 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 57789999999999988 9999999999987
No 79
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=26.77 E-value=1.5e+02 Score=25.69 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=40.9
Q ss_pred HHHhhhcccCccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhccccccccchhhcCCCHHHHHHhhcC
Q 010644 183 RYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLAS 254 (505)
Q Consensus 183 ~~C~~~L~~~~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf~~v~~~~~eFl~L~~~~L~~LL~s 254 (505)
....+|+ .++.++++.++..|.-. +...|.+.|.+|++..... -+++.+..++.-
T Consensus 86 ~wD~~F~---~id~~~l~eLl~AAnyL----~I~~Lld~~c~~va~~i~g----------kt~eeir~~f~I 140 (159)
T 2ast_A 86 VWDQEFL---KVDQGTLFELILAANYL----DIKGLLDVTCKTVANMIKG----------KTPEEIRKTFNI 140 (159)
T ss_dssp HHHHHHT---CSCHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHSS----------CCHHHHHHHTTC
T ss_pred HHHHHHH---cCCHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHcC----------CCHHHHHHHcCC
Confidence 3444555 48899999999888654 8999999999999876543 356777777653
No 80
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=24.13 E-value=31 Score=29.49 Aligned_cols=30 Identities=10% Similarity=0.127 Sum_probs=27.2
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHH
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 226 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI 226 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+
T Consensus 114 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLL----LLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHh
Confidence 57889999999999988 9999999999886
No 81
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=20.73 E-value=52 Score=27.09 Aligned_cols=32 Identities=9% Similarity=0.046 Sum_probs=27.5
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhh
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAA 228 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~ 228 (505)
.++.+|+..++..|+.+ ++..|++.|.+++..
T Consensus 86 ~i~~~~v~~ll~aA~~l----~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQPGELRPLQEAARAL----GVQSLEEACWRARGD 117 (119)
T ss_dssp EECGGGHHHHHHHHHHT----TCHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHhh
Confidence 57889999999999987 999999999998764
No 82
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=20.30 E-value=38 Score=28.30 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=26.3
Q ss_pred ccCcccHHHHHhhcchhhhcccchhHHHHHHHHHhhcc
Q 010644 193 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARY 230 (505)
Q Consensus 193 ~l~~~Ncl~il~~A~~~~~a~~~~~L~~~~~~fI~~nf 230 (505)
.++.+|+..++..|+.+ +++.|++.|.+|+.++.
T Consensus 90 ~~~~~~~~~ll~~A~~~----~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKY----ALERLKVMCEDALCSNL 123 (145)
T ss_dssp TTGGGTHHHHHHHHHHT----TCHHHHHHHHCC-----
T ss_pred CCcHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhC
Confidence 46788999999999987 99999999999998664
Done!