Query 010654
Match_columns 505
No_of_seqs 361 out of 3161
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 03:02:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010654.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010654hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10115 protease 2; Provision 100.0 2.4E-67 5.3E-72 548.2 60.2 480 5-497 196-679 (686)
2 COG1770 PtrB Protease II [Amin 100.0 4.6E-68 9.9E-73 515.3 50.4 485 1-496 193-681 (682)
3 KOG2237 Predicted serine prote 100.0 2E-59 4.4E-64 450.8 35.3 487 1-498 202-710 (712)
4 COG1505 Serine proteases of th 100.0 1.4E-51 3.1E-56 395.2 35.4 358 118-495 290-648 (648)
5 COG1506 DAP2 Dipeptidyl aminop 100.0 8.2E-48 1.8E-52 400.0 43.4 434 35-496 171-619 (620)
6 KOG2281 Dipeptidyl aminopeptid 100.0 3.4E-35 7.3E-40 282.2 29.2 330 136-492 517-866 (867)
7 PF00326 Peptidase_S9: Prolyl 100.0 6.6E-36 1.4E-40 272.1 14.3 209 279-496 1-212 (213)
8 KOG2100 Dipeptidyl aminopeptid 100.0 2.1E-32 4.6E-37 286.3 40.4 391 83-496 347-750 (755)
9 PRK13604 luxD acyl transferase 99.9 2.5E-22 5.3E-27 185.9 20.8 226 232-476 8-249 (307)
10 PRK10566 esterase; Provisional 99.9 2.2E-22 4.8E-27 188.0 20.0 231 245-494 11-249 (249)
11 PRK05077 frsA fermentation/res 99.9 4.6E-21 1E-25 190.0 23.1 240 230-494 165-413 (414)
12 PF05448 AXE1: Acetyl xylan es 99.9 8.3E-22 1.8E-26 187.1 15.7 246 229-493 52-320 (320)
13 PLN02298 hydrolase, alpha/beta 99.9 7E-21 1.5E-25 185.4 22.7 257 230-500 29-324 (330)
14 PLN02442 S-formylglutathione h 99.9 6.7E-21 1.5E-25 180.1 20.5 245 231-495 16-282 (283)
15 TIGR02821 fghA_ester_D S-formy 99.9 2E-20 4.3E-25 176.6 22.6 243 232-494 12-275 (275)
16 PRK05371 x-prolyl-dipeptidyl a 99.9 2.5E-19 5.5E-24 188.9 26.7 261 225-497 162-523 (767)
17 PRK10162 acetyl esterase; Prov 99.8 1.5E-19 3.3E-24 173.9 22.6 235 231-495 55-317 (318)
18 COG3458 Acetyl esterase (deace 99.8 4.7E-20 1E-24 161.5 16.7 229 228-473 51-302 (321)
19 PF01738 DLH: Dienelactone hyd 99.8 2.1E-20 4.6E-25 170.6 12.4 205 246-494 1-218 (218)
20 PLN02385 hydrolase; alpha/beta 99.8 4.7E-19 1E-23 173.7 21.8 251 231-495 59-347 (349)
21 TIGR01840 esterase_phb esteras 99.8 1.4E-19 3E-24 164.2 15.3 192 249-453 2-197 (212)
22 PF02897 Peptidase_S9_N: Proly 99.8 4.4E-18 9.5E-23 171.0 25.5 202 7-217 201-411 (414)
23 PHA02857 monoglyceride lipase; 99.8 1.5E-18 3.3E-23 164.7 20.5 238 238-494 5-274 (276)
24 COG0412 Dienelactone hydrolase 99.8 2.4E-18 5.2E-23 156.8 20.2 216 234-495 3-235 (236)
25 PRK10749 lysophospholipase L2; 99.8 5E-18 1.1E-22 164.9 20.4 247 233-493 30-329 (330)
26 KOG1455 Lysophospholipase [Lip 99.8 4.3E-18 9.2E-23 153.0 18.1 248 233-493 27-312 (313)
27 KOG1552 Predicted alpha/beta h 99.8 3.3E-18 7.2E-23 150.7 16.0 219 232-494 34-253 (258)
28 COG1647 Esterase/lipase [Gener 99.8 3.2E-18 7E-23 146.0 12.4 209 264-491 16-242 (243)
29 TIGR00976 /NonD putative hydro 99.8 2.8E-17 6.2E-22 170.1 20.5 241 239-497 2-307 (550)
30 COG0657 Aes Esterase/lipase [L 99.8 1.3E-17 2.7E-22 160.9 16.1 229 240-492 58-309 (312)
31 PLN02652 hydrolase; alpha/beta 99.7 2E-16 4.4E-21 155.6 22.3 245 232-495 109-389 (395)
32 PF02129 Peptidase_S15: X-Pro 99.7 1.2E-17 2.6E-22 157.5 12.7 212 242-463 1-267 (272)
33 PRK11460 putative hydrolase; P 99.7 1.4E-16 3.1E-21 146.0 16.8 185 261-494 14-209 (232)
34 KOG1515 Arylacetamide deacetyl 99.7 1.1E-15 2.3E-20 144.5 19.4 240 233-493 63-335 (336)
35 PF07859 Abhydrolase_3: alpha/ 99.7 7.8E-17 1.7E-21 146.4 11.1 187 266-472 1-209 (211)
36 COG2267 PldB Lysophospholipase 99.7 1.3E-15 2.8E-20 144.2 19.2 244 234-495 10-296 (298)
37 PF06500 DUF1100: Alpha/beta h 99.7 1.5E-16 3.2E-21 152.0 12.7 239 230-494 162-410 (411)
38 PF10503 Esterase_phd: Esteras 99.7 8.7E-16 1.9E-20 136.8 16.1 194 247-453 2-198 (220)
39 PRK10985 putative hydrolase; P 99.7 3.3E-15 7.1E-20 144.7 19.9 244 234-495 32-322 (324)
40 KOG4391 Predicted alpha/beta h 99.7 7E-16 1.5E-20 130.7 12.6 235 230-496 51-285 (300)
41 PLN02511 hydrolase 99.7 3.4E-15 7.4E-20 147.6 19.5 247 232-495 70-367 (388)
42 PRK00870 haloalkane dehalogena 99.7 2.7E-14 5.8E-19 137.4 22.7 239 232-493 20-301 (302)
43 TIGR03343 biphenyl_bphD 2-hydr 99.6 2.3E-15 5E-20 143.3 15.0 209 263-491 30-281 (282)
44 PF12715 Abhydrolase_7: Abhydr 99.6 2.1E-15 4.5E-20 141.5 13.5 143 229-376 84-259 (390)
45 TIGR03611 RutD pyrimidine util 99.6 5.8E-15 1.3E-19 138.1 15.7 208 262-491 12-256 (257)
46 PF12695 Abhydrolase_5: Alpha/ 99.6 2.3E-15 4.9E-20 128.0 11.4 145 265-471 1-145 (145)
47 COG4099 Predicted peptidase [G 99.6 2.7E-15 5.9E-20 133.2 11.3 178 241-463 169-354 (387)
48 COG0429 Predicted hydrolase of 99.6 2.3E-14 5E-19 130.9 17.5 244 235-495 51-342 (345)
49 TIGR01607 PST-A Plasmodium sub 99.6 3.1E-14 6.8E-19 137.9 17.1 240 238-491 2-331 (332)
50 PLN00021 chlorophyllase 99.6 1.5E-13 3.3E-18 130.7 21.2 207 244-497 37-287 (313)
51 PLN02824 hydrolase, alpha/beta 99.6 4.2E-14 9E-19 135.5 17.6 215 263-493 29-294 (294)
52 PLN02872 triacylglycerol lipas 99.6 1.3E-14 2.8E-19 142.2 14.2 145 228-376 39-196 (395)
53 PRK11071 esterase YqiA; Provis 99.6 4.3E-14 9.3E-19 125.2 15.1 186 264-491 2-189 (190)
54 PF02230 Abhydrolase_2: Phosph 99.6 1.3E-14 2.9E-19 131.9 11.7 189 261-494 12-216 (216)
55 COG3509 LpqC Poly(3-hydroxybut 99.6 6.2E-14 1.3E-18 125.8 14.9 128 242-377 43-179 (312)
56 TIGR02427 protocat_pcaD 3-oxoa 99.6 3.9E-14 8.5E-19 131.7 14.0 206 262-490 12-250 (251)
57 TIGR02240 PHA_depoly_arom poly 99.6 1.3E-13 2.7E-18 130.9 17.4 224 241-494 9-267 (276)
58 COG2945 Predicted hydrolase of 99.6 1.1E-13 2.4E-18 115.9 13.8 198 234-491 5-205 (210)
59 PLN02965 Probable pheophorbida 99.5 5.8E-13 1.3E-17 124.7 20.1 205 265-491 5-251 (255)
60 TIGR01249 pro_imino_pep_1 prol 99.5 4.6E-13 9.9E-18 128.9 19.8 121 237-375 8-128 (306)
61 PRK03592 haloalkane dehalogena 99.5 7.6E-13 1.6E-17 126.9 20.9 210 263-494 27-290 (295)
62 TIGR03056 bchO_mg_che_rel puta 99.5 3.5E-13 7.6E-18 127.9 18.1 206 263-490 28-277 (278)
63 COG2936 Predicted acyl esteras 99.5 2.5E-13 5.4E-18 134.4 17.3 219 231-464 17-288 (563)
64 PLN02679 hydrolase, alpha/beta 99.5 3E-13 6.5E-18 132.9 17.9 212 263-492 88-356 (360)
65 PRK04043 tolB translocation pr 99.5 1.4E-12 3.1E-17 129.5 22.9 184 6-213 211-403 (419)
66 TIGR01250 pro_imino_pep_2 prol 99.5 3.3E-13 7.3E-18 128.4 17.8 107 262-376 24-130 (288)
67 PRK10673 acyl-CoA esterase; Pr 99.5 1.1E-13 2.4E-18 129.7 14.1 208 261-492 14-254 (255)
68 TIGR03100 hydr1_PEP hydrolase, 99.5 5.2E-13 1.1E-17 126.0 18.3 130 234-377 3-134 (274)
69 TIGR03101 hydr2_PEP hydrolase, 99.5 1.9E-12 4.1E-17 119.8 21.0 215 235-463 2-241 (266)
70 TIGR03695 menH_SHCHC 2-succiny 99.5 6.9E-13 1.5E-17 123.1 17.7 103 264-377 2-105 (251)
71 TIGR01738 bioH putative pimelo 99.5 1.8E-13 3.8E-18 126.9 13.3 198 264-489 5-244 (245)
72 KOG1838 Alpha/beta hydrolase [ 99.5 1.4E-12 3.1E-17 123.9 18.8 198 232-441 92-339 (409)
73 PLN02894 hydrolase, alpha/beta 99.5 2.1E-12 4.6E-17 128.3 20.7 216 262-497 104-389 (402)
74 PRK14875 acetoin dehydrogenase 99.5 6.5E-13 1.4E-17 131.8 16.9 206 261-492 129-370 (371)
75 PRK06489 hypothetical protein; 99.5 6.7E-13 1.4E-17 130.7 15.8 217 263-493 69-357 (360)
76 PLN03087 BODYGUARD 1 domain co 99.5 1.1E-12 2.4E-17 131.0 17.3 125 237-376 179-308 (481)
77 COG0400 Predicted esterase [Ge 99.5 8.9E-13 1.9E-17 116.3 14.4 184 261-494 16-206 (207)
78 KOG4178 Soluble epoxide hydrol 99.5 6.5E-12 1.4E-16 115.4 20.1 105 261-375 42-146 (322)
79 TIGR01836 PHA_synth_III_C poly 99.5 1.8E-12 3.9E-17 127.1 16.1 109 262-379 62-173 (350)
80 TIGR01392 homoserO_Ac_trn homo 99.4 3.1E-12 6.7E-17 125.5 17.6 112 263-376 31-161 (351)
81 PF12697 Abhydrolase_6: Alpha/ 99.4 8.3E-14 1.8E-18 127.3 6.0 189 266-473 1-218 (228)
82 PRK03204 haloalkane dehalogena 99.4 2.9E-12 6.3E-17 121.9 16.7 102 263-376 34-135 (286)
83 PRK07581 hypothetical protein; 99.4 1.2E-12 2.5E-17 128.1 14.2 220 262-494 40-337 (339)
84 PRK01029 tolB translocation pr 99.4 1.3E-11 2.8E-16 123.5 21.9 192 5-213 162-362 (428)
85 PRK03629 tolB translocation pr 99.4 6.1E-11 1.3E-15 119.1 26.6 188 5-213 176-366 (429)
86 PRK10349 carboxylesterase BioH 99.4 3E-12 6.4E-17 120.1 15.6 194 263-482 13-247 (256)
87 PRK04043 tolB translocation pr 99.4 3.3E-11 7.2E-16 119.8 23.5 185 6-213 167-360 (419)
88 PF03583 LIP: Secretory lipase 99.4 4.4E-12 9.5E-17 119.7 16.0 200 285-499 19-287 (290)
89 PRK00175 metX homoserine O-ace 99.4 6.5E-12 1.4E-16 124.3 17.7 224 263-493 48-374 (379)
90 PRK05137 tolB translocation pr 99.4 3.3E-11 7.1E-16 121.7 22.2 186 7-213 225-415 (435)
91 PLN02578 hydrolase 99.4 9.7E-12 2.1E-16 122.1 17.8 100 263-375 86-185 (354)
92 PRK11126 2-succinyl-6-hydroxy- 99.4 9.3E-12 2E-16 115.6 16.5 98 264-376 3-101 (242)
93 PLN02211 methyl indole-3-aceta 99.4 1.1E-11 2.4E-16 116.9 16.5 106 261-376 16-121 (273)
94 PF08840 BAAT_C: BAAT / Acyl-C 99.4 2.3E-12 5E-17 116.1 11.3 168 323-495 3-212 (213)
95 PRK01029 tolB translocation pr 99.4 4.1E-11 8.9E-16 120.0 21.0 188 7-213 210-406 (428)
96 PRK08775 homoserine O-acetyltr 99.4 1.9E-11 4.1E-16 119.6 17.1 187 287-493 94-339 (343)
97 PRK05137 tolB translocation pr 99.4 1.3E-10 2.7E-15 117.5 23.1 187 6-213 180-369 (435)
98 PRK04792 tolB translocation pr 99.4 2.7E-10 5.9E-15 115.0 24.5 187 6-213 196-385 (448)
99 KOG4667 Predicted esterase [Li 99.3 4.7E-11 1E-15 101.7 15.1 220 232-475 9-243 (269)
100 PRK02889 tolB translocation pr 99.3 4.9E-10 1.1E-14 112.7 25.1 187 6-213 174-363 (427)
101 PRK02889 tolB translocation pr 99.3 3.3E-10 7E-15 114.0 23.1 183 7-211 219-404 (427)
102 PRK00178 tolB translocation pr 99.3 4.3E-10 9.3E-15 113.7 23.8 187 6-213 177-366 (430)
103 PLN03084 alpha/beta hydrolase 99.3 3.4E-11 7.4E-16 118.0 14.9 225 240-491 111-382 (383)
104 KOG3043 Predicted hydrolase re 99.3 5.2E-11 1.1E-15 102.5 13.7 164 285-494 60-241 (242)
105 PRK03629 tolB translocation pr 99.3 2.8E-10 6.1E-15 114.4 21.2 184 8-213 223-409 (429)
106 PRK00178 tolB translocation pr 99.3 3.6E-10 7.9E-15 114.2 21.6 185 7-213 222-409 (430)
107 COG0823 TolB Periplasmic compo 99.3 1.5E-10 3.3E-15 114.2 18.2 184 5-209 215-401 (425)
108 PRK10439 enterobactin/ferric e 99.3 3.9E-10 8.4E-15 111.4 21.0 203 233-471 180-391 (411)
109 PRK04792 tolB translocation pr 99.3 5.4E-10 1.2E-14 112.8 22.1 184 7-212 241-427 (448)
110 PF00756 Esterase: Putative es 99.3 4E-12 8.6E-17 118.8 6.2 205 243-471 5-236 (251)
111 PRK04922 tolB translocation pr 99.3 5.5E-10 1.2E-14 112.7 21.9 185 7-213 227-414 (433)
112 PRK04922 tolB translocation pr 99.3 9.3E-10 2E-14 111.1 22.2 187 6-213 182-371 (433)
113 PLN02980 2-oxoglutarate decarb 99.2 2E-10 4.3E-15 132.0 17.9 221 262-494 1370-1640(1655)
114 KOG4409 Predicted hydrolase/ac 99.2 2.3E-10 5E-15 105.6 14.4 212 261-491 88-362 (365)
115 KOG3101 Esterase D [General fu 99.2 2.7E-11 5.9E-16 102.6 7.6 211 245-471 27-261 (283)
116 PRK06765 homoserine O-acetyltr 99.2 5E-10 1.1E-14 110.1 16.8 225 261-492 54-387 (389)
117 KOG4627 Kynurenine formamidase 99.2 1.6E-10 3.6E-15 97.6 10.8 180 261-471 65-247 (270)
118 PRK01742 tolB translocation pr 99.2 8.5E-09 1.8E-13 103.9 25.0 179 7-213 183-364 (429)
119 COG0627 Predicted esterase [Ge 99.2 5.2E-10 1.1E-14 105.4 14.9 226 260-497 51-315 (316)
120 KOG1454 Predicted hydrolase/ac 99.2 1.3E-09 2.8E-14 104.6 16.4 213 261-493 56-324 (326)
121 PRK05855 short chain dehydroge 99.1 6.9E-10 1.5E-14 117.1 15.4 107 239-362 8-114 (582)
122 cd00312 Esterase_lipase Estera 99.1 1.4E-10 3E-15 119.5 9.5 129 245-378 78-214 (493)
123 PF12740 Chlorophyllase2: Chlo 99.1 1.1E-09 2.5E-14 98.9 11.1 114 247-377 5-131 (259)
124 PF03403 PAF-AH_p_II: Platelet 99.1 1.6E-09 3.5E-14 105.8 12.5 112 261-375 98-260 (379)
125 COG2272 PnbA Carboxylesterase 99.0 6.1E-10 1.3E-14 107.7 9.1 129 240-377 76-217 (491)
126 TIGR02800 propeller_TolB tol-p 99.0 2.8E-08 6.1E-13 100.2 21.4 187 6-213 168-357 (417)
127 TIGR01838 PHA_synth_I poly(R)- 99.0 7.9E-09 1.7E-13 104.6 16.4 109 262-378 187-303 (532)
128 TIGR02800 propeller_TolB tol-p 99.0 5.9E-08 1.3E-12 97.9 22.3 182 8-211 214-398 (417)
129 COG0823 TolB Periplasmic compo 99.0 1.6E-08 3.4E-13 100.1 17.5 191 3-213 168-361 (425)
130 PF05728 UPF0227: Uncharacteri 99.0 8E-09 1.7E-13 90.2 13.4 182 265-490 1-186 (187)
131 PRK07868 acyl-CoA synthetase; 99.0 1.7E-08 3.7E-13 112.2 17.8 107 262-377 66-177 (994)
132 PRK01742 tolB translocation pr 99.0 4.8E-08 1E-12 98.5 18.9 176 7-211 227-405 (429)
133 COG4757 Predicted alpha/beta h 99.0 5.6E-09 1.2E-13 90.4 10.1 224 236-472 8-263 (281)
134 KOG2984 Predicted hydrolase [G 98.9 6.4E-09 1.4E-13 87.9 9.3 210 264-492 43-275 (277)
135 PF06342 DUF1057: Alpha/beta h 98.9 2.4E-07 5.1E-12 83.7 18.4 204 234-452 7-240 (297)
136 PF00561 Abhydrolase_1: alpha/ 98.9 9.7E-10 2.1E-14 100.9 3.3 78 293-376 1-78 (230)
137 PF08538 DUF1749: Protein of u 98.9 2.8E-08 6.1E-13 91.7 12.3 110 262-379 32-150 (303)
138 PF00930 DPPIV_N: Dipeptidyl p 98.9 3.6E-08 7.9E-13 96.6 13.9 182 7-202 157-353 (353)
139 COG4188 Predicted dienelactone 98.9 1.3E-08 2.9E-13 95.5 10.0 129 234-365 39-182 (365)
140 PF00135 COesterase: Carboxyle 98.8 7.6E-09 1.6E-13 108.0 9.1 128 245-376 108-244 (535)
141 KOG2624 Triglyceride lipase-ch 98.8 5.7E-08 1.2E-12 94.3 14.2 144 226-377 41-199 (403)
142 cd00707 Pancreat_lipase_like P 98.8 3.1E-08 6.6E-13 93.1 9.4 112 261-377 34-147 (275)
143 KOG3847 Phospholipase A2 (plat 98.7 1.8E-07 4E-12 84.6 12.9 113 259-374 114-272 (399)
144 COG2382 Fes Enterochelin ester 98.7 1.5E-07 3.3E-12 85.9 12.2 194 245-472 81-281 (299)
145 KOG2382 Predicted alpha/beta h 98.7 9.7E-07 2.1E-11 81.7 15.4 214 261-493 50-313 (315)
146 PF07224 Chlorophyllase: Chlor 98.6 2.5E-07 5.3E-12 82.1 10.4 117 245-378 32-158 (307)
147 TIGR01839 PHA_synth_II poly(R) 98.6 9.9E-07 2.2E-11 88.6 15.3 87 283-379 238-330 (560)
148 KOG2112 Lysophospholipase [Lip 98.6 9.9E-07 2.1E-11 76.1 13.1 115 338-492 89-203 (206)
149 PF06821 Ser_hydrolase: Serine 98.6 4.2E-07 9.1E-12 78.5 10.8 153 266-474 1-156 (171)
150 COG2021 MET2 Homoserine acetyl 98.6 2.1E-06 4.5E-11 80.8 15.8 113 261-375 49-180 (368)
151 PF02273 Acyl_transf_2: Acyl t 98.6 9.9E-07 2.2E-11 77.4 12.2 220 238-476 7-242 (294)
152 KOG2564 Predicted acetyltransf 98.6 3.4E-07 7.4E-12 81.8 9.1 117 232-362 49-166 (343)
153 COG3571 Predicted hydrolase of 98.6 7.9E-06 1.7E-10 66.8 15.9 165 263-472 14-182 (213)
154 TIGR03230 lipo_lipase lipoprot 98.5 7.4E-07 1.6E-11 87.8 12.0 112 261-376 39-153 (442)
155 COG0596 MhpC Predicted hydrola 98.5 1.8E-06 3.8E-11 80.3 13.4 100 263-376 21-122 (282)
156 COG4946 Uncharacterized protei 98.5 7.1E-06 1.5E-10 78.2 16.0 184 9-213 60-298 (668)
157 COG1073 Hydrolases of the alph 98.5 1.3E-06 2.8E-11 83.5 11.6 236 244-494 31-298 (299)
158 PF09752 DUF2048: Uncharacteri 98.5 1.3E-05 2.9E-10 75.4 17.5 123 248-375 79-208 (348)
159 PF00930 DPPIV_N: Dipeptidyl p 98.4 1.3E-05 2.9E-10 78.6 18.0 199 6-221 61-325 (353)
160 COG3208 GrsT Predicted thioest 98.4 4.8E-06 1E-10 73.9 12.6 202 261-495 6-234 (244)
161 PF03959 FSH1: Serine hydrolas 98.4 1.1E-06 2.3E-11 79.5 8.0 170 262-475 3-205 (212)
162 KOG1553 Predicted alpha/beta h 98.3 4.9E-06 1.1E-10 76.5 11.2 135 234-381 215-349 (517)
163 PF14583 Pectate_lyase22: Olig 98.3 2.7E-05 5.9E-10 74.4 16.2 193 35-254 39-259 (386)
164 PF10340 DUF2424: Protein of u 98.3 2.8E-05 6E-10 74.5 16.2 120 248-380 108-238 (374)
165 PF10142 PhoPQ_related: PhoPQ- 98.3 0.00013 2.7E-09 70.4 20.8 154 332-498 162-325 (367)
166 TIGR03502 lipase_Pla1_cef extr 98.3 4.8E-06 1E-10 87.5 10.4 99 262-362 448-575 (792)
167 COG2819 Predicted hydrolase of 98.2 3E-05 6.4E-10 70.2 13.1 54 324-377 118-172 (264)
168 PF14583 Pectate_lyase22: Olig 98.2 0.00011 2.4E-09 70.3 17.0 108 4-117 164-278 (386)
169 PF06028 DUF915: Alpha/beta hy 98.1 5.8E-05 1.3E-09 69.4 13.6 212 264-490 12-252 (255)
170 PRK04940 hypothetical protein; 98.1 5.5E-05 1.2E-09 64.8 12.2 118 342-491 60-178 (180)
171 TIGR01849 PHB_depoly_PhaZ poly 98.1 8.8E-05 1.9E-09 72.6 15.0 71 419-493 333-406 (406)
172 KOG1516 Carboxylesterase and r 98.1 8E-06 1.7E-10 85.4 7.4 125 246-376 97-231 (545)
173 KOG2551 Phospholipase/carboxyh 98.0 7.8E-05 1.7E-09 65.0 11.2 122 326-495 92-222 (230)
174 PF05677 DUF818: Chlamydia CHL 98.0 9.8E-05 2.1E-09 68.8 12.2 120 232-363 111-236 (365)
175 PF02897 Peptidase_S9_N: Proly 98.0 0.0041 8.9E-08 62.6 25.2 148 9-156 94-261 (414)
176 PF11339 DUF3141: Protein of u 98.0 0.00078 1.7E-08 66.3 18.1 103 261-379 67-178 (581)
177 PF08662 eIF2A: Eukaryotic tra 97.9 0.00063 1.4E-08 60.4 15.8 144 35-198 9-165 (194)
178 TIGR03866 PQQ_ABC_repeats PQQ- 97.9 0.0053 1.2E-07 58.4 23.5 181 7-213 10-190 (300)
179 PF06057 VirJ: Bacterial virul 97.9 0.00019 4E-09 61.8 11.4 155 284-477 21-179 (192)
180 PF12146 Hydrolase_4: Putative 97.9 1.8E-05 4E-10 58.5 4.7 58 243-307 1-58 (79)
181 PF11144 DUF2920: Protein of u 97.9 0.00045 9.7E-09 66.5 14.9 142 321-463 161-332 (403)
182 PRK13616 lipoprotein LpqB; Pro 97.9 0.00061 1.3E-08 70.7 16.7 163 34-213 352-530 (591)
183 COG3545 Predicted esterase of 97.8 0.00052 1.1E-08 57.7 12.6 120 317-471 37-156 (181)
184 COG3243 PhaC Poly(3-hydroxyalk 97.8 0.00019 4.2E-09 68.7 11.2 88 283-378 130-218 (445)
185 PF05577 Peptidase_S28: Serine 97.8 9.8E-05 2.1E-09 74.7 9.3 114 263-378 29-149 (434)
186 COG4947 Uncharacterized protei 97.7 2.5E-05 5.3E-10 64.6 3.0 112 329-463 90-210 (227)
187 PRK13616 lipoprotein LpqB; Pro 97.7 0.00069 1.5E-08 70.3 14.1 134 6-155 377-527 (591)
188 COG3150 Predicted esterase [Ge 97.7 0.0019 4.1E-08 53.7 13.1 141 323-490 42-186 (191)
189 PRK10115 protease 2; Provision 97.6 0.021 4.6E-07 61.0 23.9 132 22-155 111-255 (686)
190 PF10282 Lactonase: Lactonase, 97.5 0.0064 1.4E-07 59.5 17.5 166 36-213 148-327 (345)
191 PTZ00472 serine carboxypeptida 97.5 0.00085 1.8E-08 67.9 11.4 131 243-379 60-218 (462)
192 TIGR03866 PQQ_ABC_repeats PQQ- 97.5 0.017 3.6E-07 54.9 19.9 179 8-213 95-282 (300)
193 PF08662 eIF2A: Eukaryotic tra 97.5 0.0046 1E-07 54.9 14.7 99 34-141 62-160 (194)
194 COG4814 Uncharacterized protei 97.5 0.0052 1.1E-07 54.9 14.1 195 262-472 45-269 (288)
195 COG4946 Uncharacterized protei 97.4 0.011 2.4E-07 57.1 16.9 128 57-202 383-514 (668)
196 PRK11028 6-phosphogluconolacto 97.4 0.12 2.7E-06 50.1 25.0 138 7-156 11-157 (330)
197 PF00151 Lipase: Lipase; Inte 97.4 0.00026 5.7E-09 68.1 5.9 112 260-375 68-185 (331)
198 PF10282 Lactonase: Lactonase, 97.3 0.11 2.3E-06 51.0 23.5 195 7-214 12-228 (345)
199 COG2706 3-carboxymuconate cycl 97.2 0.027 6E-07 52.7 16.8 164 37-213 150-326 (346)
200 PF02239 Cytochrom_D1: Cytochr 97.2 0.044 9.6E-07 53.9 19.3 185 8-213 16-205 (369)
201 PF01674 Lipase_2: Lipase (cla 97.2 0.0019 4.1E-08 58.0 8.2 90 265-362 3-95 (219)
202 KOG2139 WD40 repeat protein [G 97.2 0.017 3.6E-07 54.0 14.3 122 24-155 188-311 (445)
203 PF07819 PGAP1: PGAP1-like pro 97.1 0.0039 8.5E-08 56.7 10.3 102 263-373 4-119 (225)
204 KOG0279 G protein beta subunit 97.1 0.12 2.7E-06 46.7 18.9 183 4-213 34-225 (315)
205 PF10230 DUF2305: Uncharacteri 97.1 0.0034 7.3E-08 58.8 9.8 111 263-377 2-122 (266)
206 KOG3253 Predicted alpha/beta h 97.1 0.007 1.5E-07 60.5 12.0 166 262-472 175-346 (784)
207 PF05705 DUF829: Eukaryotic pr 97.0 0.0078 1.7E-07 55.6 10.8 44 423-470 178-221 (240)
208 KOG2182 Hydrolytic enzymes of 97.0 0.0055 1.2E-07 60.2 9.8 132 242-375 67-205 (514)
209 PRK11028 6-phosphogluconolacto 96.9 0.42 9.2E-06 46.3 23.5 116 35-156 83-206 (330)
210 PLN02733 phosphatidylcholine-s 96.9 0.0017 3.6E-08 64.9 6.3 88 279-375 108-199 (440)
211 PF07676 PD40: WD40-like Beta 96.9 0.0023 5.1E-08 40.0 4.8 28 33-60 10-39 (39)
212 PF00450 Peptidase_S10: Serine 96.9 0.011 2.3E-07 59.6 12.0 135 241-379 21-183 (415)
213 KOG4840 Predicted hydrolases o 96.8 0.0028 6.1E-08 55.2 6.0 106 264-380 37-147 (299)
214 KOG0318 WD40 repeat stress pro 96.8 0.061 1.3E-06 52.9 15.5 139 5-155 155-308 (603)
215 PF12048 DUF3530: Protein of u 96.8 0.086 1.9E-06 50.4 16.6 128 241-375 69-227 (310)
216 COG1770 PtrB Protease II [Amin 96.8 0.38 8.3E-06 49.4 21.4 154 3-158 94-259 (682)
217 KOG3967 Uncharacterized conser 96.8 0.02 4.4E-07 49.6 10.6 110 249-366 89-214 (297)
218 KOG0315 G-protein beta subunit 96.7 0.067 1.5E-06 47.6 13.5 139 6-156 144-289 (311)
219 TIGR02658 TTQ_MADH_Hv methylam 96.7 0.68 1.5E-05 44.9 23.2 71 38-111 52-137 (352)
220 PF08450 SGL: SMP-30/Gluconola 96.7 0.39 8.4E-06 44.4 19.8 135 10-155 62-213 (246)
221 KOG2931 Differentiation-relate 96.6 0.48 1.1E-05 43.7 18.6 130 234-376 23-156 (326)
222 KOG2055 WD40 repeat protein [G 96.5 0.034 7.4E-07 53.6 11.5 137 6-155 278-417 (514)
223 COG2706 3-carboxymuconate cycl 96.5 0.74 1.6E-05 43.5 22.0 189 10-213 18-226 (346)
224 KOG4389 Acetylcholinesterase/B 96.5 0.004 8.6E-08 60.7 5.3 114 264-378 136-256 (601)
225 PF05990 DUF900: Alpha/beta hy 96.5 0.012 2.6E-07 53.8 8.2 96 261-362 16-113 (233)
226 PF00975 Thioesterase: Thioest 96.5 0.012 2.5E-07 53.8 8.0 84 265-362 2-86 (229)
227 PF03096 Ndr: Ndr family; Int 96.4 0.022 4.7E-07 52.7 9.3 128 238-377 4-134 (283)
228 KOG0293 WD40 repeat-containing 96.4 0.069 1.5E-06 50.9 12.5 159 29-211 224-385 (519)
229 KOG4388 Hormone-sensitive lipa 96.4 0.0093 2E-07 59.3 7.1 88 262-361 395-488 (880)
230 PF08450 SGL: SMP-30/Gluconola 96.4 0.63 1.4E-05 43.0 19.2 183 6-213 20-215 (246)
231 KOG2048 WD40 repeat protein [G 96.3 0.29 6.4E-06 49.7 17.0 145 5-156 350-506 (691)
232 cd00200 WD40 WD40 domain, foun 96.2 0.98 2.1E-05 41.6 20.0 179 7-213 30-210 (289)
233 KOG2183 Prolylcarboxypeptidase 96.2 0.026 5.7E-07 54.1 8.8 88 290-377 109-203 (492)
234 KOG0293 WD40 repeat-containing 96.1 0.059 1.3E-06 51.3 10.5 130 10-155 293-425 (519)
235 KOG0279 G protein beta subunit 96.1 0.58 1.3E-05 42.6 16.1 137 6-156 125-263 (315)
236 KOG1407 WD40 repeat protein [F 96.1 0.49 1.1E-05 42.7 15.4 40 9-52 88-127 (313)
237 PF07082 DUF1350: Protein of u 96.1 0.058 1.2E-06 48.7 9.9 175 248-454 8-190 (250)
238 KOG1446 Histone H3 (Lys4) meth 96.1 0.31 6.7E-06 45.0 14.5 97 36-142 192-293 (311)
239 PF07676 PD40: WD40-like Beta 96.0 0.014 3.1E-07 36.3 4.4 26 81-106 14-39 (39)
240 PF10647 Gmad1: Lipoprotein Lp 95.9 0.82 1.8E-05 42.4 17.4 115 35-155 27-144 (253)
241 PTZ00420 coronin; Provisional 95.9 2.6 5.7E-05 43.8 24.5 139 8-156 97-249 (568)
242 PF07519 Tannase: Tannase and 95.8 0.069 1.5E-06 54.3 10.6 131 245-381 16-154 (474)
243 PF11187 DUF2974: Protein of u 95.8 0.023 5E-07 51.4 6.3 73 300-373 43-119 (224)
244 COG3386 Gluconolactonase [Carb 95.7 1 2.2E-05 43.0 17.1 151 36-201 115-280 (307)
245 PF08386 Abhydrolase_4: TAP-li 95.6 0.024 5.3E-07 44.4 5.0 42 425-473 35-76 (103)
246 PLN03016 sinapoylglucose-malat 95.6 0.048 1.1E-06 54.6 8.3 131 243-379 49-212 (433)
247 PLN02209 serine carboxypeptida 95.6 0.055 1.2E-06 54.3 8.7 133 242-379 50-214 (437)
248 KOG0271 Notchless-like WD40 re 95.6 0.29 6.3E-06 46.4 12.6 133 8-155 137-276 (480)
249 PTZ00421 coronin; Provisional 95.6 1 2.2E-05 46.2 17.9 140 8-155 148-290 (493)
250 COG4782 Uncharacterized protei 95.2 0.081 1.8E-06 50.2 7.8 112 261-379 114-236 (377)
251 KOG1282 Serine carboxypeptidas 95.1 0.12 2.7E-06 51.5 9.2 137 239-379 52-215 (454)
252 KOG2565 Predicted hydrolases o 95.0 0.1 2.3E-06 49.4 7.9 117 242-371 132-258 (469)
253 KOG2055 WD40 repeat protein [G 94.9 0.6 1.3E-05 45.4 12.7 107 37-156 263-375 (514)
254 cd00200 WD40 WD40 domain, foun 94.7 1.2 2.5E-05 41.1 14.7 127 7-146 156-284 (289)
255 KOG0291 WD40-repeat-containing 94.6 7 0.00015 40.9 20.6 175 9-207 331-507 (893)
256 KOG4497 Uncharacterized conser 94.5 0.36 7.7E-06 44.9 9.8 107 37-156 14-123 (447)
257 TIGR02658 TTQ_MADH_Hv methylam 94.5 0.8 1.7E-05 44.4 12.9 113 37-156 199-331 (352)
258 PTZ00421 coronin; Provisional 94.4 7.1 0.00015 40.1 21.9 139 8-155 98-245 (493)
259 KOG1445 Tumor-specific antigen 94.3 0.36 7.9E-06 48.8 10.1 98 5-111 697-799 (1012)
260 KOG0973 Histone transcription 94.2 1.2 2.6E-05 47.9 14.3 153 37-202 75-244 (942)
261 PTZ00420 coronin; Provisional 94.2 4.1 8.8E-05 42.5 18.0 138 8-155 148-293 (568)
262 COG3319 Thioesterase domains o 94.2 0.15 3.3E-06 46.9 6.9 85 264-362 1-85 (257)
263 PF05057 DUF676: Putative seri 94.2 0.062 1.3E-06 48.6 4.3 20 342-361 78-97 (217)
264 PF02239 Cytochrom_D1: Cytochr 94.1 3.1 6.8E-05 41.0 16.5 139 6-155 56-202 (369)
265 TIGR03712 acc_sec_asp2 accesso 94.1 1.1 2.5E-05 44.5 12.9 122 240-382 272-395 (511)
266 COG1075 LipA Predicted acetylt 94.1 0.18 3.9E-06 48.9 7.6 97 265-375 61-162 (336)
267 KOG0303 Actin-binding protein 94.0 2.6 5.7E-05 40.4 14.5 53 8-67 154-206 (472)
268 PF03283 PAE: Pectinacetyleste 94.0 0.033 7.1E-07 54.3 2.3 37 324-360 138-174 (361)
269 KOG2541 Palmitoyl protein thio 93.9 2.4 5.2E-05 38.8 13.6 89 263-364 24-114 (296)
270 KOG2139 WD40 repeat protein [G 93.8 1.1 2.4E-05 42.4 11.5 93 7-110 217-311 (445)
271 PRK10252 entF enterobactin syn 93.7 0.32 6.9E-06 56.8 10.0 99 263-375 1068-1169(1296)
272 KOG3975 Uncharacterized conser 93.5 1.9 4.1E-05 38.9 12.1 129 242-375 9-145 (301)
273 KOG0266 WD40 repeat-containing 93.5 3.3 7E-05 42.3 15.9 137 7-155 224-364 (456)
274 KOG2096 WD40 repeat protein [G 93.5 2.4 5.2E-05 39.5 13.0 71 35-109 232-309 (420)
275 KOG2314 Translation initiation 93.5 9.1 0.0002 38.6 17.7 96 6-111 280-382 (698)
276 KOG0264 Nucleosome remodeling 93.5 4.9 0.00011 39.1 15.6 142 8-159 200-351 (422)
277 KOG2314 Translation initiation 93.5 3 6.6E-05 41.8 14.4 117 36-155 398-525 (698)
278 PF04083 Abhydro_lipase: Parti 93.4 0.25 5.5E-06 34.5 5.2 49 229-277 8-57 (63)
279 KOG0284 Polyadenylation factor 93.3 0.58 1.3E-05 44.8 9.1 153 36-213 101-255 (464)
280 TIGR02171 Fb_sc_TIGR02171 Fibr 93.3 0.71 1.5E-05 49.5 10.7 57 56-113 329-388 (912)
281 KOG0271 Notchless-like WD40 re 93.1 0.91 2E-05 43.2 9.8 110 34-155 118-235 (480)
282 PF02450 LCAT: Lecithin:choles 93.0 0.19 4.2E-06 49.8 6.0 87 280-375 66-158 (389)
283 KOG0305 Anaphase promoting com 92.9 3 6.4E-05 42.1 13.9 142 5-156 277-420 (484)
284 PF07433 DUF1513: Protein of u 92.8 2 4.3E-05 40.5 11.8 74 36-111 9-86 (305)
285 PF11288 DUF3089: Protein of u 92.8 0.17 3.6E-06 44.8 4.6 85 293-378 46-138 (207)
286 PF01764 Lipase_3: Lipase (cla 92.7 0.34 7.4E-06 40.2 6.2 38 323-362 47-84 (140)
287 PF13360 PQQ_2: PQQ-like domai 92.6 7.5 0.00016 35.3 15.8 142 56-216 3-146 (238)
288 COG3386 Gluconolactonase [Carb 92.6 2.5 5.4E-05 40.3 12.5 94 57-155 86-193 (307)
289 KOG2110 Uncharacterized conser 92.6 9.9 0.00021 36.3 16.6 138 56-208 106-248 (391)
290 PF03088 Str_synth: Strictosid 92.5 2.1 4.6E-05 32.3 9.5 71 36-111 2-88 (89)
291 KOG1274 WD40 repeat protein [G 92.4 3.7 8.1E-05 43.7 14.1 123 22-155 130-262 (933)
292 KOG0264 Nucleosome remodeling 92.0 4.9 0.00011 39.1 13.5 139 8-155 250-404 (422)
293 KOG2110 Uncharacterized conser 92.0 7.3 0.00016 37.2 14.2 135 9-156 107-249 (391)
294 PF06433 Me-amine-dh_H: Methyl 91.8 13 0.00027 35.8 18.8 167 32-214 36-217 (342)
295 PF07519 Tannase: Tannase and 91.4 0.34 7.3E-06 49.3 5.6 67 426-492 355-426 (474)
296 KOG0289 mRNA splicing factor [ 91.3 16 0.00034 35.8 18.5 135 8-156 283-420 (506)
297 KOG0266 WD40 repeat-containing 91.3 5.5 0.00012 40.6 14.2 113 33-156 205-319 (456)
298 KOG2048 WD40 repeat protein [G 91.2 4.8 0.0001 41.4 13.0 137 6-155 401-548 (691)
299 KOG0305 Anaphase promoting com 91.2 8.8 0.00019 38.8 14.9 178 8-208 197-419 (484)
300 PF02089 Palm_thioest: Palmito 91.0 1.7 3.7E-05 40.4 9.1 103 261-373 4-112 (279)
301 KOG0291 WD40-repeat-containing 91.0 5 0.00011 41.9 13.0 142 7-155 457-612 (893)
302 KOG1273 WD40 repeat protein [G 90.8 5.2 0.00011 37.3 11.8 106 7-125 44-150 (405)
303 KOG2315 Predicted translation 90.7 17 0.00037 36.7 16.0 112 35-156 221-345 (566)
304 KOG0296 Angio-associated migra 90.5 17 0.00036 34.8 18.0 152 37-213 70-223 (399)
305 KOG0263 Transcription initiati 90.4 1.9 4.2E-05 44.7 9.7 80 8-94 557-638 (707)
306 cd00741 Lipase Lipase. Lipase 90.4 0.5 1.1E-05 40.0 4.9 25 340-364 26-50 (153)
307 KOG0278 Serine/threonine kinas 90.1 8.1 0.00017 34.9 12.0 128 9-155 166-297 (334)
308 PLN02606 palmitoyl-protein thi 90.1 3.8 8.2E-05 38.6 10.6 100 261-372 25-127 (306)
309 KOG1446 Histone H3 (Lys4) meth 89.4 18 0.0004 33.7 20.1 164 34-213 17-220 (311)
310 KOG0318 WD40 repeat stress pro 89.3 18 0.00039 36.3 14.8 128 8-146 465-595 (603)
311 KOG3724 Negative regulator of 89.2 0.52 1.1E-05 49.3 4.7 50 321-371 154-210 (973)
312 KOG0272 U4/U6 small nuclear ri 89.1 3.2 6.9E-05 40.2 9.4 143 33-197 263-408 (459)
313 COG3490 Uncharacterized protei 89.0 16 0.00035 33.9 13.2 56 55-111 90-149 (366)
314 PLN02633 palmitoyl protein thi 89.0 5.5 0.00012 37.6 10.8 101 261-373 24-127 (314)
315 KOG0772 Uncharacterized conser 88.9 13 0.00027 37.3 13.4 160 38-211 275-446 (641)
316 PF10647 Gmad1: Lipoprotein Lp 88.8 20 0.00043 33.2 16.2 140 6-155 46-197 (253)
317 KOG1407 WD40 repeat protein [F 88.7 9.4 0.0002 34.8 11.4 106 36-152 69-176 (313)
318 KOG0643 Translation initiation 88.6 20 0.00042 32.9 14.2 135 9-155 75-220 (327)
319 KOG0282 mRNA splicing factor [ 88.5 3.4 7.3E-05 40.7 9.3 133 8-155 237-372 (503)
320 COG2939 Carboxypeptidase C (ca 88.5 0.88 1.9E-05 45.4 5.5 98 260-360 98-216 (498)
321 COG3946 VirJ Type IV secretory 88.2 1.3 2.7E-05 43.0 6.2 73 285-368 280-352 (456)
322 PF06259 Abhydrolase_8: Alpha/ 87.8 1.7 3.7E-05 37.6 6.3 38 324-362 92-129 (177)
323 COG5354 Uncharacterized protei 87.8 32 0.0007 34.5 15.8 101 4-111 198-307 (561)
324 KOG2106 Uncharacterized conser 87.6 28 0.00061 34.9 14.8 106 36-152 412-518 (626)
325 KOG0296 Angio-associated migra 87.6 27 0.00059 33.4 15.0 134 9-156 87-221 (399)
326 KOG2394 WD40 protein DMR-N9 [G 87.5 0.61 1.3E-05 46.3 3.7 55 36-94 295-351 (636)
327 cd00519 Lipase_3 Lipase (class 87.5 1.2 2.7E-05 40.5 5.7 38 323-362 111-148 (229)
328 PLN02454 triacylglycerol lipas 86.9 1.2 2.6E-05 43.9 5.3 41 322-362 208-248 (414)
329 KOG2315 Predicted translation 86.7 6.5 0.00014 39.6 10.2 57 37-96 317-375 (566)
330 PRK02888 nitrous-oxide reducta 86.6 38 0.00082 35.5 16.0 26 82-111 327-352 (635)
331 KOG0273 Beta-transducin family 86.3 18 0.0004 35.7 12.7 107 36-156 240-348 (524)
332 KOG0263 Transcription initiati 86.2 22 0.00047 37.4 14.0 170 9-205 474-646 (707)
333 KOG2521 Uncharacterized conser 86.2 28 0.0006 33.8 14.0 67 427-497 228-294 (350)
334 KOG0277 Peroxisomal targeting 86.1 9 0.00019 34.8 9.8 133 10-155 85-221 (311)
335 PLN00181 protein SPA1-RELATED; 86.0 60 0.0013 35.8 20.7 134 8-155 555-690 (793)
336 KOG0288 WD40 repeat protein Ti 86.0 18 0.00039 35.2 12.3 116 8-136 322-443 (459)
337 KOG4497 Uncharacterized conser 85.6 14 0.00031 34.7 11.2 91 36-136 323-414 (447)
338 PLN02517 phosphatidylcholine-s 85.3 1.4 3.1E-05 45.2 5.1 75 281-362 158-233 (642)
339 COG4287 PqaA PhoPQ-activated p 85.3 3.6 7.9E-05 39.3 7.3 143 323-472 214-371 (507)
340 KOG1445 Tumor-specific antigen 85.2 25 0.00053 36.3 13.4 95 55-155 149-248 (1012)
341 PLN02408 phospholipase A1 85.0 1.6 3.4E-05 42.4 5.1 39 324-362 182-220 (365)
342 PLN02919 haloacid dehalogenase 84.5 75 0.0016 36.3 18.7 69 36-111 687-771 (1057)
343 KOG0272 U4/U6 small nuclear ri 84.5 27 0.00058 34.1 12.7 80 11-96 328-408 (459)
344 KOG0772 Uncharacterized conser 83.8 20 0.00043 36.0 11.8 112 35-153 368-486 (641)
345 KOG1007 WD repeat protein TSSC 83.4 21 0.00046 33.1 11.1 108 37-155 129-245 (370)
346 KOG0270 WD40 repeat-containing 83.4 49 0.0011 32.6 14.2 137 8-155 266-404 (463)
347 PLN02571 triacylglycerol lipas 83.3 2 4.3E-05 42.4 5.1 40 323-362 207-246 (413)
348 smart00824 PKS_TE Thioesterase 83.0 5.6 0.00012 35.0 7.8 69 291-371 24-96 (212)
349 PLN02919 haloacid dehalogenase 82.8 92 0.002 35.7 18.5 111 36-156 744-889 (1057)
350 COG3391 Uncharacterized conser 82.4 55 0.0012 32.5 18.8 162 35-213 119-286 (381)
351 KOG1539 WD repeat protein [Gen 82.3 4.8 0.0001 42.5 7.5 82 9-96 557-638 (910)
352 KOG0315 G-protein beta subunit 82.2 40 0.00086 30.7 17.2 137 7-156 60-198 (311)
353 PLN02324 triacylglycerol lipas 81.9 2.4 5.2E-05 41.7 5.0 40 322-361 195-234 (415)
354 KOG0973 Histone transcription 81.9 5.6 0.00012 43.1 8.0 108 24-141 123-236 (942)
355 KOG1920 IkappaB kinase complex 81.6 98 0.0021 34.9 17.2 60 33-96 70-130 (1265)
356 PLN02802 triacylglycerol lipas 80.9 2.7 5.8E-05 42.4 5.0 40 323-362 311-350 (509)
357 PF06850 PHB_depo_C: PHB de-po 80.8 3.1 6.7E-05 36.2 4.7 66 426-493 136-202 (202)
358 PF03088 Str_synth: Strictosid 80.5 12 0.00026 28.2 7.3 54 5-64 34-87 (89)
359 PF06433 Me-amine-dh_H: Methyl 80.2 44 0.00094 32.2 12.5 129 43-179 2-143 (342)
360 KOG0286 G-protein beta subunit 80.2 51 0.0011 30.7 14.4 152 21-192 46-203 (343)
361 KOG1274 WD40 repeat protein [G 80.0 78 0.0017 34.3 15.2 104 82-196 103-208 (933)
362 TIGR02171 Fb_sc_TIGR02171 Fibr 79.5 21 0.00045 38.9 11.2 65 88-159 319-389 (912)
363 KOG1551 Uncharacterized conser 78.7 4.2 9.1E-05 37.0 5.0 25 342-366 195-219 (371)
364 PF06977 SdiA-regulated: SdiA- 78.7 18 0.00039 33.3 9.4 119 81-209 27-148 (248)
365 KOG0275 Conserved WD40 repeat- 78.4 11 0.00024 35.3 7.7 18 33-50 350-367 (508)
366 COG3391 Uncharacterized conser 78.3 72 0.0016 31.6 14.3 115 35-155 163-283 (381)
367 KOG1283 Serine carboxypeptidas 78.1 17 0.00036 34.4 8.8 119 241-362 11-142 (414)
368 PLN00413 triacylglycerol lipas 77.9 4.3 9.4E-05 40.6 5.4 38 322-361 266-303 (479)
369 PRK13613 lipoprotein LpqB; Pro 76.6 1.1E+02 0.0023 32.5 15.9 113 36-154 367-486 (599)
370 PLN02753 triacylglycerol lipas 76.4 4.4 9.5E-05 41.1 5.0 40 322-361 289-331 (531)
371 COG3204 Uncharacterized protei 76.3 42 0.0009 31.5 10.7 119 81-210 91-212 (316)
372 KOG0647 mRNA export protein (c 76.0 70 0.0015 30.0 12.3 132 29-178 25-161 (347)
373 PLN02761 lipase class 3 family 75.7 4.7 0.0001 40.8 5.0 40 322-361 270-313 (527)
374 KOG0265 U5 snRNP-specific prot 75.6 54 0.0012 30.7 11.2 108 36-156 52-164 (338)
375 PRK02888 nitrous-oxide reducta 75.2 24 0.00052 36.9 9.9 149 39-211 200-352 (635)
376 PF13360 PQQ_2: PQQ-like domai 74.9 64 0.0014 29.0 15.3 104 40-156 33-141 (238)
377 KOG1538 Uncharacterized conser 74.8 6.4 0.00014 40.6 5.6 52 36-91 17-69 (1081)
378 PF10605 3HBOH: 3HB-oligomer h 74.6 10 0.00022 39.0 7.0 45 426-471 557-603 (690)
379 PLN02162 triacylglycerol lipas 74.3 6.1 0.00013 39.5 5.3 38 322-361 260-297 (475)
380 KOG2369 Lecithin:cholesterol a 73.6 7.5 0.00016 38.7 5.7 77 281-365 126-205 (473)
381 PLN02934 triacylglycerol lipas 73.5 6 0.00013 40.0 5.1 39 321-361 302-340 (515)
382 PF05694 SBP56: 56kDa selenium 73.1 13 0.00028 36.9 7.1 62 33-96 313-394 (461)
383 PRK13614 lipoprotein LpqB; Pro 72.6 1.3E+02 0.0028 31.6 17.3 165 36-213 347-521 (573)
384 KOG0645 WD40 repeat protein [G 72.6 81 0.0018 29.2 14.2 107 36-154 66-179 (312)
385 PLN02310 triacylglycerol lipas 71.8 6.4 0.00014 38.8 4.8 39 323-361 188-228 (405)
386 COG1506 DAP2 Dipeptidyl aminop 71.7 1.1E+02 0.0023 32.8 14.4 57 33-93 61-118 (620)
387 KOG0771 Prolactin regulatory e 70.7 34 0.00074 33.3 9.2 70 80-155 191-264 (398)
388 TIGR03300 assembly_YfgL outer 70.6 84 0.0018 30.9 12.8 82 55-142 288-369 (377)
389 KOG0650 WD40 repeat nucleolar 70.4 17 0.00037 37.1 7.3 113 36-161 526-643 (733)
390 KOG0313 Microtubule binding pr 70.0 1.1E+02 0.0024 29.7 12.2 131 8-152 281-415 (423)
391 PF04762 IKI3: IKI3 family; I 69.9 2E+02 0.0043 32.5 23.3 41 55-96 96-141 (928)
392 PRK13615 lipoprotein LpqB; Pro 69.3 1.5E+02 0.0033 31.0 16.0 162 36-212 338-504 (557)
393 PLN02719 triacylglycerol lipas 69.3 8.2 0.00018 39.1 5.0 40 322-361 275-317 (518)
394 PF15525 DUF4652: Domain of un 69.2 67 0.0015 27.9 9.6 66 9-76 89-159 (200)
395 PLN03037 lipase class 3 family 68.3 8.3 0.00018 39.1 4.8 38 324-361 298-337 (525)
396 PF04762 IKI3: IKI3 family; I 66.9 85 0.0018 35.3 12.7 104 33-140 211-320 (928)
397 KOG0283 WD40 repeat-containing 66.6 1.9E+02 0.004 31.0 14.8 130 10-155 392-532 (712)
398 KOG0646 WD40 repeat protein [G 66.3 77 0.0017 31.5 10.6 78 6-91 60-139 (476)
399 KOG0302 Ribosome Assembly prot 66.1 81 0.0018 30.6 10.4 112 36-156 262-379 (440)
400 KOG0275 Conserved WD40 repeat- 65.8 40 0.00086 31.7 8.2 83 9-96 286-369 (508)
401 KOG1539 WD repeat protein [Gen 65.8 2E+02 0.0044 31.1 16.2 81 102-196 556-637 (910)
402 KOG4328 WD40 protein [Function 65.2 91 0.002 31.0 10.8 172 8-195 210-388 (498)
403 KOG0288 WD40 repeat protein Ti 65.1 18 0.00038 35.2 6.0 79 6-92 361-448 (459)
404 PF09994 DUF2235: Uncharacteri 65.0 68 0.0015 30.2 10.1 41 321-362 72-112 (277)
405 PLN02213 sinapoylglucose-malat 64.9 13 0.00029 35.7 5.5 84 294-379 3-98 (319)
406 COG3490 Uncharacterized protei 64.5 49 0.0011 30.9 8.4 130 10-143 93-245 (366)
407 PF08237 PE-PPE: PE-PPE domain 64.5 30 0.00065 31.4 7.3 23 340-362 46-68 (225)
408 PF01083 Cutinase: Cutinase; 64.4 16 0.00035 31.8 5.4 39 322-362 63-101 (179)
409 KOG1063 RNA polymerase II elon 64.4 48 0.001 34.6 9.2 107 31-149 267-387 (764)
410 PF13449 Phytase-like: Esteras 63.0 1.5E+02 0.0032 28.6 17.7 107 36-143 89-234 (326)
411 KOG4569 Predicted lipase [Lipi 62.5 12 0.00027 36.2 4.8 37 324-362 155-191 (336)
412 PRK05579 bifunctional phosphop 62.4 44 0.00095 33.3 8.6 81 262-349 116-196 (399)
413 KOG0645 WD40 repeat protein [G 61.7 1.4E+02 0.003 27.8 13.4 112 34-156 17-136 (312)
414 KOG1273 WD40 repeat protein [G 61.4 1.3E+02 0.0028 28.6 10.6 70 34-111 26-96 (405)
415 KOG0273 Beta-transducin family 61.3 1.4E+02 0.0031 29.9 11.4 73 55-135 431-504 (524)
416 KOG0290 Conserved WD40 repeat- 60.3 1.2E+02 0.0025 28.5 10.0 139 10-155 175-318 (364)
417 KOG0310 Conserved WD40 repeat- 59.6 98 0.0021 31.0 10.0 80 82-168 117-197 (487)
418 KOG1063 RNA polymerase II elon 59.2 1.1E+02 0.0025 32.1 10.8 119 32-155 525-648 (764)
419 KOG0277 Peroxisomal targeting 58.3 1.5E+02 0.0033 27.2 18.6 140 7-159 37-182 (311)
420 PF05096 Glu_cyclase_2: Glutam 57.8 1.6E+02 0.0035 27.3 16.5 113 31-155 44-157 (264)
421 PRK11138 outer membrane biogen 57.4 1.8E+02 0.004 28.8 12.4 14 103-117 346-359 (394)
422 PRK11138 outer membrane biogen 57.3 1.6E+02 0.0035 29.2 11.9 88 56-155 266-353 (394)
423 TIGR03300 assembly_YfgL outer 55.5 2.1E+02 0.0046 28.0 19.0 99 43-156 65-164 (377)
424 PF08484 Methyltransf_14: C-me 55.1 31 0.00066 29.4 5.4 47 326-376 57-103 (160)
425 PF07433 DUF1513: Protein of u 53.6 2.1E+02 0.0045 27.3 17.4 70 82-155 11-85 (305)
426 KOG1524 WD40 repeat-containing 52.6 1.7E+02 0.0037 30.0 10.5 94 36-144 150-247 (737)
427 PF06977 SdiA-regulated: SdiA- 51.2 2E+02 0.0044 26.5 16.8 111 34-153 24-147 (248)
428 KOG4378 Nuclear protein COP1 [ 50.9 1.4E+02 0.0031 30.1 9.6 90 38-135 215-304 (673)
429 PF08553 VID27: VID27 cytoplas 50.4 1.5E+02 0.0032 32.5 10.6 129 54-197 502-639 (794)
430 TIGR03075 PQQ_enz_alc_DH PQQ-d 49.6 3.3E+02 0.0071 28.4 21.5 65 86-156 119-190 (527)
431 KOG0265 U5 snRNP-specific prot 48.8 1.7E+02 0.0038 27.5 9.3 75 10-88 240-321 (338)
432 PF03022 MRJP: Major royal jel 48.2 2.5E+02 0.0053 26.6 11.0 94 7-109 33-160 (287)
433 KOG0646 WD40 repeat protein [G 48.2 2E+02 0.0043 28.7 10.1 29 118-146 211-240 (476)
434 KOG0306 WD40-repeat-containing 48.0 2.1E+02 0.0045 30.6 10.7 112 31-150 508-619 (888)
435 KOG0307 Vesicle coat complex C 47.9 79 0.0017 35.1 8.1 137 9-155 185-327 (1049)
436 KOG2096 WD40 repeat protein [G 47.8 2.6E+02 0.0056 26.7 13.5 114 35-155 90-217 (420)
437 KOG1520 Predicted alkaloid syn 47.7 73 0.0016 31.1 7.1 94 57-155 128-249 (376)
438 KOG0639 Transducin-like enhanc 47.6 1.3E+02 0.0028 30.5 8.7 115 10-135 442-562 (705)
439 KOG0283 WD40 repeat-containing 46.6 4E+02 0.0086 28.7 12.6 38 8-50 432-470 (712)
440 KOG4388 Hormone-sensitive lipa 46.5 17 0.00038 37.1 2.9 46 423-473 786-831 (880)
441 PLN02847 triacylglycerol lipas 46.4 16 0.00035 37.8 2.7 21 342-362 251-271 (633)
442 PF05694 SBP56: 56kDa selenium 46.2 3.3E+02 0.0071 27.5 12.3 102 7-116 221-348 (461)
443 PF05576 Peptidase_S37: PS-10 45.8 29 0.00063 34.2 4.2 103 262-375 62-167 (448)
444 KOG1963 WD40 repeat protein [G 45.6 2.7E+02 0.0058 30.2 11.3 56 36-96 256-313 (792)
445 KOG0319 WD40-repeat-containing 45.3 1.9E+02 0.004 30.8 9.9 54 37-96 25-83 (775)
446 KOG2106 Uncharacterized conser 45.1 2.1E+02 0.0045 29.1 9.8 57 36-96 452-510 (626)
447 KOG0295 WD40 repeat-containing 44.7 2.4E+02 0.0053 27.3 9.8 56 5-67 311-367 (406)
448 KOG0639 Transducin-like enhanc 43.8 35 0.00075 34.2 4.4 77 8-91 487-567 (705)
449 PTZ00472 serine carboxypeptida 43.7 39 0.00085 34.5 5.1 28 423-451 364-391 (462)
450 KOG1009 Chromatin assembly com 42.3 2.9E+02 0.0064 27.2 10.1 52 81-139 129-180 (434)
451 PF10605 3HBOH: 3HB-oligomer h 42.1 4.4E+02 0.0096 27.8 12.2 37 344-380 287-324 (690)
452 KOG0771 Prolactin regulatory e 41.8 2.4E+02 0.0053 27.7 9.5 67 69-141 274-341 (398)
453 COG3673 Uncharacterized conser 41.8 56 0.0012 31.0 5.1 40 322-362 103-142 (423)
454 KOG4283 Transcription-coupled 41.6 1.8E+02 0.0039 27.4 8.2 86 8-98 124-211 (397)
455 KOG3914 WD repeat protein WDR4 41.6 3.5E+02 0.0076 26.5 12.2 68 81-156 157-224 (390)
456 KOG1920 IkappaB kinase complex 41.4 2.4E+02 0.0051 32.1 10.4 98 35-136 199-301 (1265)
457 PLN02213 sinapoylglucose-malat 41.2 66 0.0014 31.0 6.0 28 424-452 234-261 (319)
458 KOG1282 Serine carboxypeptidas 40.3 67 0.0014 32.5 5.9 62 424-491 364-446 (454)
459 PF12566 DUF3748: Protein of u 40.2 24 0.00052 27.6 2.2 16 38-53 74-89 (122)
460 KOG0641 WD40 repeat protein [G 39.8 2.8E+02 0.0061 24.9 12.2 97 36-141 236-336 (350)
461 KOG2111 Uncharacterized conser 39.6 3.4E+02 0.0075 25.8 10.7 88 6-96 157-247 (346)
462 KOG4378 Nuclear protein COP1 [ 38.2 4.5E+02 0.0098 26.8 13.2 135 9-156 144-281 (673)
463 KOG0269 WD40 repeat-containing 37.8 4.7E+02 0.01 28.3 11.4 136 8-155 156-296 (839)
464 KOG2237 Predicted serine prote 37.7 5.3E+02 0.011 27.4 13.9 79 39-120 145-227 (712)
465 KOG0268 Sof1-like rRNA process 37.3 3.1E+02 0.0067 26.7 9.3 108 38-155 194-302 (433)
466 PF06441 EHN: Epoxide hydrolas 37.1 44 0.00095 26.5 3.3 30 242-276 76-105 (112)
467 KOG1408 WD40 repeat protein [F 37.0 3.9E+02 0.0086 28.6 10.6 110 36-153 83-194 (1080)
468 PF13418 Kelch_4: Galactose ox 36.8 59 0.0013 20.8 3.5 32 40-72 10-44 (49)
469 PF12242 Eno-Rase_NADH_b: NAD( 36.7 1.3E+02 0.0027 22.0 5.2 40 322-361 19-59 (78)
470 KOG0289 mRNA splicing factor [ 35.9 4.6E+02 0.01 26.2 14.5 67 36-111 352-420 (506)
471 cd07224 Pat_like Patatin-like 35.2 67 0.0015 29.3 4.8 36 327-363 15-50 (233)
472 KOG0310 Conserved WD40 repeat- 35.0 4.9E+02 0.011 26.3 12.1 110 37-158 116-228 (487)
473 PLN02209 serine carboxypeptida 33.6 1E+02 0.0022 31.2 6.1 30 423-453 351-380 (437)
474 KOG0640 mRNA cleavage stimulat 33.2 1.9E+02 0.0042 27.3 7.2 109 37-156 118-247 (430)
475 TIGR03075 PQQ_enz_alc_DH PQQ-d 32.9 5.9E+02 0.013 26.6 15.2 51 102-156 441-491 (527)
476 TIGR02276 beta_rpt_yvtn 40-res 32.8 1.2E+02 0.0025 18.4 5.4 25 41-67 1-25 (42)
477 PLN03016 sinapoylglucose-malat 32.7 1.1E+02 0.0023 31.1 6.0 30 423-453 347-376 (433)
478 cd00216 PQQ_DH Dehydrogenases 32.5 5.7E+02 0.012 26.3 19.8 59 56-120 71-137 (488)
479 COG3727 Vsr DNA G:T-mismatch r 32.5 91 0.002 25.3 4.3 37 262-298 56-114 (150)
480 PF04301 DUF452: Protein of un 32.2 75 0.0016 28.5 4.4 32 342-375 57-88 (213)
481 COG5276 Uncharacterized conser 32.1 4.5E+02 0.0098 25.0 14.0 92 55-155 105-199 (370)
482 smart00135 LY Low-density lipo 31.9 1.2E+02 0.0026 18.2 4.6 29 36-66 13-41 (43)
483 COG4553 DepA Poly-beta-hydroxy 31.9 62 0.0013 30.3 3.8 68 426-495 341-409 (415)
484 COG5153 CVT17 Putative lipase 31.7 53 0.0011 30.5 3.3 22 342-363 276-297 (425)
485 KOG4540 Putative lipase essent 31.7 53 0.0011 30.5 3.3 22 342-363 276-297 (425)
486 COG1647 Esterase/lipase [Gener 31.4 1.1E+02 0.0024 27.6 5.1 39 426-470 17-55 (243)
487 KOG1524 WD40 repeat-containing 31.1 5E+02 0.011 26.8 10.0 22 83-110 153-174 (737)
488 KOG1009 Chromatin assembly com 31.0 5.3E+02 0.012 25.5 11.6 50 102-152 321-371 (434)
489 KOG0284 Polyadenylation factor 30.7 4.4E+02 0.0095 26.1 9.2 130 9-155 203-337 (464)
490 TIGR02604 Piru_Ver_Nterm putat 29.7 4.3E+02 0.0093 25.9 9.8 97 7-107 89-213 (367)
491 KOG0316 Conserved WD40 repeat- 29.3 4.5E+02 0.0097 24.1 14.9 150 36-213 64-216 (307)
492 KOG0307 Vesicle coat complex C 28.9 3.2E+02 0.007 30.7 9.0 114 83-210 124-240 (1049)
493 PF00450 Peptidase_S10: Serine 28.3 22 0.00047 35.6 0.3 28 426-453 332-359 (415)
494 KOG4532 WD40-like repeat conta 28.0 5E+02 0.011 24.2 13.7 112 36-155 163-282 (344)
495 TIGR03100 hydr1_PEP hydrolase, 27.1 2E+02 0.0044 26.8 6.7 32 426-457 28-60 (274)
496 KOG0282 mRNA splicing factor [ 26.2 1.7E+02 0.0038 29.3 5.9 34 31-67 432-465 (503)
497 TIGR00521 coaBC_dfp phosphopan 25.5 2.9E+02 0.0062 27.5 7.6 78 263-349 113-193 (390)
498 TIGR02690 resist_ArsH arsenica 25.5 1.2E+02 0.0026 27.4 4.5 44 291-352 92-139 (219)
499 KOG0379 Kelch repeat-containin 25.4 7.6E+02 0.016 25.4 11.2 127 10-140 141-281 (482)
500 KOG0319 WD40-repeat-containing 25.3 6.8E+02 0.015 26.9 10.2 62 83-152 332-394 (775)
No 1
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=2.4e-67 Score=548.20 Aligned_cols=480 Identities=43% Similarity=0.739 Sum_probs=407.3
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC--CCCceeeeeccccceeEE
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS--KPEELRVLTPRVVGVDTA 82 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~--~~~~~~~l~~~~~~~~~~ 82 (505)
.|+++||+|++||++.++++||++.++.+.+....|.||+++++.+.+...+++++++++ ++. ++++.+...+..+.
T Consensus 196 ~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ 274 (686)
T PRK10115 196 LLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAE-PFVFLPRRKDHEYS 274 (686)
T ss_pred CCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCC-ceEEEECCCCCEEE
Confidence 699999999999998889999998877777666567799999988887777889988853 343 66666666666677
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
..+.++.+|+.++. +.++.+|+.+++.+.+..+.++++..+..+.++.++++.+++..++++..+++++++. +..+.
T Consensus 275 ~~~~~~~ly~~tn~-~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~--~~~~~ 351 (686)
T PRK10115 275 LDHYQHRFYLRSNR-HGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRK--TREVI 351 (686)
T ss_pred EEeCCCEEEEEEcC-CCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCC--CCceE
Confidence 66778899999987 4678899999987433333377776677899999999999999999999999988764 32222
Q ss_pred ccCCCceeeccCCeee-ecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeee-cCCCCCCCceEEEEEEEC
Q 010654 163 SLQGGKSVEFIDPVYS-IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETV-LGGFDTNNYFTERKWASA 240 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s 240 (505)
.+.++.+... ....+.+++++.+++.++|+++|+++|.+++.+++.++ ++.. .+.+++..+.+|++++++
T Consensus 352 ------~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~~~--l~~~~~~~~~~~~~~~e~v~~~s 423 (686)
T PRK10115 352 ------GIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRV--LKQTEVPGFDAANYRSEHLWITA 423 (686)
T ss_pred ------EecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcEEE--EEecCCCCcCccccEEEEEEEEC
Confidence 2222222221 11233346778899999999999999999998876333 3332 234666678999999999
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.||.+|+++++++++. ...++.|+||++|||++.+..+.|+...+.|+++||+|+.+|+|||++||++|++++...++.
T Consensus 424 ~DG~~Ip~~l~~~~~~-~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 424 RDGVEVPVSLVYHRKH-FRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCEEEEEEEEECCC-CCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 9999999998998865 445678999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
++++|+++|+++|++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+.+++.++..++...++.+||+
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~ 582 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGN 582 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887777877777789999
Q ss_pred CCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH
Q 010654 401 PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 480 (505)
Q Consensus 401 ~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 480 (505)
|.+++.+++++++||+++++++++|++||+||.+|++||++|+.+|+++|+++++++++++|..++++||+...++...+
T Consensus 583 p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~ 662 (686)
T PRK10115 583 PQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSY 662 (686)
T ss_pred CCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHH
Confidence 98888888999999999999999998889999999999999999999999999999999999776689999888888899
Q ss_pred HHHHHHHHHHHHhhCCC
Q 010654 481 REAAFTYTFLMRALSML 497 (505)
Q Consensus 481 ~~~~~~~~fl~~~l~~~ 497 (505)
++.+.+++|+...++..
T Consensus 663 ~~~A~~~aFl~~~~~~~ 679 (686)
T PRK10115 663 EGVAMEYAFLIALAQGT 679 (686)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999998754
No 2
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-68 Score=515.34 Aligned_cols=485 Identities=52% Similarity=0.908 Sum_probs=449.4
Q ss_pred CCCCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccce
Q 010654 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV 79 (505)
Q Consensus 1 ~~~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~ 79 (505)
.|+.+||++||+|.+||++.++++||+++++.|++++.-|.+.++|++..+++.++++++++.+.+. +++++.++..|.
T Consensus 193 ~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~ 272 (682)
T COG1770 193 LDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGV 272 (682)
T ss_pred EcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCc
Confidence 3788999999999999988899999999999999999999999999999999999999999999887 678888998899
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
.|...+-|..+++.+|.++ .+.+|+..++ .+....| ++++..+..+.++....+++++..++++.+++++.+....
T Consensus 273 eY~~eh~~d~f~i~sN~~g-knf~l~~ap~-~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~ 350 (682)
T COG1770 273 EYSVEHGGDRFYILSNADG-KNFKLVRAPV-SADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTG 350 (682)
T ss_pred EEeeeecCcEEEEEecCCC-cceEEEEccC-CCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCC
Confidence 9999999999999999866 7789999998 4466677 8999999999999999999999999999999998887642
Q ss_pred CCcccccCCCceeeccCCeeeec-CCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSID-PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERK 236 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (505)
+. ..+.|++..++.. ..+..+++..+.+.++|.++|.++|.+|+.+++.++++..+..+.+++..+.++++
T Consensus 351 ~~--------~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~ri 422 (682)
T COG1770 351 EE--------RGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRI 422 (682)
T ss_pred ce--------eeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEE
Confidence 22 3477777766532 34556788999999999999999999999999988888777777799999999999
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
+.+..||.+||..|++.++. +..++.|++|+.||.++....+.|+.....|++|||+..+++.||+|+.|..|+++++.
T Consensus 423 wa~a~dgv~VPVSLvyrkd~-~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~ 501 (682)
T COG1770 423 WATADDGVQVPVSLVYRKDT-KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKL 501 (682)
T ss_pred EEEcCCCcEeeEEEEEeccc-CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhh
Confidence 99999999999999999987 77889999999999999999999998888999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
..+.+.+.|+++|+++|+++++.++++|+++|+|+||.++.+++.+.|++|+++|+.+|+.|.+..|+++++|++..+|.
T Consensus 502 l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~ 581 (682)
T COG1770 502 LNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWD 581 (682)
T ss_pred hhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
|||+|.+++.|++|+++||+.|+....+|++|++.|..|++|..++..++.++|+..+.....+++..++.+||++..++
T Consensus 582 EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgR 661 (682)
T COG1770 582 EWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGR 661 (682)
T ss_pred hhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999998888899999889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCC
Q 010654 477 FERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~~ 496 (505)
.+.+++.+..++|+.+.++.
T Consensus 662 f~~lee~A~eYaF~l~~~~~ 681 (682)
T COG1770 662 FQRLEEIAFEYAFLLKLAGT 681 (682)
T ss_pred hHHHHHHHHHHHHHhhhccC
Confidence 99999999999999887653
No 3
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-59 Score=450.85 Aligned_cols=487 Identities=45% Similarity=0.721 Sum_probs=400.6
Q ss_pred CCCCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecccc---ceEEEEEeCCCCC-ceee-eecc
Q 010654 1 MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI---TRFVFYLDVSKPE-ELRV-LTPR 75 (505)
Q Consensus 1 ~~~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~---~~~l~~~d~~~~~-~~~~-l~~~ 75 (505)
+|+.+||++||+|.+||.|.++++++++.++.+.....-..|++++.+.+.+.+ .+.+|.+|+.... -++. +.++
T Consensus 202 ~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~~~vf~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~~~~ 281 (712)
T KOG2237|consen 202 EDENNRPHKVYYHTLGTDQSEDVLLYEEKDEPKHVFISETKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLILPR 281 (712)
T ss_pred eccccCcceEEEEecccCCCcceEEEecCCCCeEEEEEEEecCceEEEEEeeccCCccceEEEEecccccCCcchheeec
Confidence 478999999999999999999999999998877765555666666566654443 4699999988765 2342 5566
Q ss_pred ccceeEE------eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCee
Q 010654 76 VVGVDTA------ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQ 147 (505)
Q Consensus 76 ~~~~~~~------~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~ 147 (505)
..+++++ +..++..++|.++. ..+++.+.++++..+.+..| ++.++....+..++..++.+++........
T Consensus 282 v~~v~~f~eh~~fi~~~~t~~~~~tn~-~~p~y~l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~ 360 (712)
T KOG2237|consen 282 VKGVDCFVEHYDFITNEGTEFYFLTNK-DAPNYYLLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLK 360 (712)
T ss_pred cchhhhhhhhhhheeccCcceeeeccC-CCCceeEEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCch
Confidence 6565433 56677889999887 46889999999987545567 788777767888887777655555544332
Q ss_pred EEE-EEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE---EEEEEeeec
Q 010654 148 KIT-TYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS---VLKKIETVL 223 (505)
Q Consensus 148 ~l~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~ 223 (505)
.+. +.+.- .|. ....||-+.+++.+....++++.+.|..+|+.+|+.+|.+|+.++.. .+...+...
T Consensus 361 ~i~q~~~~l-~g~--------~~~~fpLpv~sv~~~~g~~~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~l 431 (712)
T KOG2237|consen 361 HILQVRDLL-DGS--------LLRSFPLPVGSVSGTSGDFKSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVL 431 (712)
T ss_pred hhccccccc-cCc--------eeeeecCCCCcccccccCCCCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeecccc
Confidence 221 11111 122 23345555556555555778899999999999999999999998842 233444445
Q ss_pred CCCCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC
Q 010654 224 GGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 224 ~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 303 (505)
+.++.+.+.+++++++|.||+.||.++++.+.. +..++.|++|+.|||++....+.|......|.++|++.+.+|.||+
T Consensus 432 pg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~-k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG 510 (712)
T KOG2237|consen 432 PGFDASDYVVERIEVSSKDGTKVPMFIVYKKDI-KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG 510 (712)
T ss_pred CcccccceEEEEEEEecCCCCccceEEEEechh-hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC
Confidence 678888999999999999999999999997776 7778999999999999999999999888889999999999999999
Q ss_pred CCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 304 GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
|++|..|++.|....+++.++|+++|++||++++++.|+++++.|+|+||.++++++.++||+|+|+++.+|+.|++.++
T Consensus 511 Ge~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~ 590 (712)
T KOG2237|consen 511 GEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTH 590 (712)
T ss_pred cccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC----C
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD----N 458 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~----~ 458 (505)
..+..|++..+|.++|+|++.+.+..++.++|++++++.. +|.+|+..+.+|+||++.++.++.++|+.+-... +
T Consensus 591 ~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~ 670 (712)
T KOG2237|consen 591 KDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTN 670 (712)
T ss_pred ccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCC
Confidence 9989999888999999997766666666677777776665 9999999999999999999999999999875433 4
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCC
Q 010654 459 ILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLP 498 (505)
Q Consensus 459 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 498 (505)
.+++..+.++||+...++..++++.+..++||.+.++..+
T Consensus 671 pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~~~ 710 (712)
T KOG2237|consen 671 PVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNSDW 710 (712)
T ss_pred CEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcCcc
Confidence 4888888899999988899999999999999999987654
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-51 Score=395.22 Aligned_cols=358 Identities=37% Similarity=0.550 Sum_probs=311.3
Q ss_pred EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 118 LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 118 ~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
++.+.....+..+.+.+++++.....|.+.++.++... +... +++.+|.+. .+...+.+.+++.+++..++
T Consensus 290 ~~~P~~~~~le~v~tt~~~~va~~l~nv~~~l~v~~~~--g~~~------~~v~l~~~g-a~~~~~~~~~g~ev~l~~t~ 360 (648)
T COG1505 290 EFIPEEEQSLEQVVTTKDKLVAGTLDNVSGRLEVYDLK--GERI------EEVELPPPG-ALGMGSADKDGDEVFLAFTS 360 (648)
T ss_pred EecCCcccceeeeEEEcCeEEeeeehhccceEEEeccC--ceEe------eecccCCcc-ceeeccCCCCCcEEEEEeec
Confidence 67777777899999999999999999988888888765 4332 345555543 22222445678999999999
Q ss_pred CCCCceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC
Q 010654 198 LRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN 277 (505)
Q Consensus 198 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~ 277 (505)
+++|+.+|+++..+++.++ +....-.++++.+.+|+...+|.||++||.++++ ++. +.+ +.|++|+.|||+....
T Consensus 361 F~tP~~~~r~~~~~~eLe~--ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-~~d-~~pTll~aYGGF~vsl 435 (648)
T COG1505 361 FTTPSTLYRLDLFGGELEV--IREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-KKD-ENPTLLYAYGGFNISL 435 (648)
T ss_pred ccCCCceEEEecCCceehh--hhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCC-cCC-CCceEEEecccccccc
Confidence 9999999999998877333 3333346889999999999999999999999998 776 555 8999999999999999
Q ss_pred CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHH
Q 010654 278 DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357 (505)
Q Consensus 278 ~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~ 357 (505)
.+.|+.....|.++|.+.+++|.||+|+||.+||+++.+..+++.++|+.++++.|+++++..|+++||.|+|.||.++.
T Consensus 436 tP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg 515 (648)
T COG1505 436 TPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVG 515 (648)
T ss_pred CCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEE
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC-CCCCeEEEEccCCCC
Q 010654 358 AVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA-QNYPHILVTAGLNDP 436 (505)
Q Consensus 358 ~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~-~~~Pp~Li~~G~~D~ 436 (505)
.+++++|++|.|+|+.+|++||+++. .++....+..|||+|.+|+.+.+|.++||++|++. .++||+||..+..|+
T Consensus 516 ~alTQrPelfgA~v~evPllDMlRYh---~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DD 592 (648)
T COG1505 516 AALTQRPELFGAAVCEVPLLDMLRYH---LLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDD 592 (648)
T ss_pred eeeccChhhhCceeeccchhhhhhhc---ccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccc
Confidence 99999999999999999999999874 33333333489999999999999999999999998 599999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 437 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
||+|.|+++|+.+|++++.++ +|..+.++||+...+..+..++.+.++.||.+.|+
T Consensus 593 RVHPaHarKfaa~L~e~~~pv---~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 593 RVHPAHARKFAAKLQEVGAPV---LLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred cccchHHHHHHHHHHhcCCce---EEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999664 45555589999888777778888999999999874
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-48 Score=399.99 Aligned_cols=434 Identities=20% Similarity=0.211 Sum_probs=312.8
Q ss_pred EEEEEeCCCcEEEEEecccc----ceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCC---CCCceEEE
Q 010654 35 LGLQASESKKFLFIASESKI----TRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDE---LFNSELLA 106 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~----~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~---~~~~~l~~ 106 (505)
..+.+.+|++.++....... ....++....++. +..+++...+.. ..+.++|+.+++..+... .....+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~ 249 (620)
T COG1506 171 VSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGE-LESLTPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILL 249 (620)
T ss_pred eeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCc-eEEEcCCCceeeeeeeCCCCCeeEEeccCCccCccccceEEE
Confidence 35566777777666544331 2334444444554 667666543332 348999999999887643 23456666
Q ss_pred eeCCCCCCceEEEcCC---CC-ceeeEEEEeCCEEEEEEec-CCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 107 CPVDNTSETTVLIPHR---ES-VKLQDIQLFIDHLAVYERE-GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~---~~-~~i~~~~~~~d~l~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
++.+. ++..-.+... .. ..+.. ...++.+++++.. .+.. .++.+...+... .... .....+.
T Consensus 250 ~~~~~-~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~--~l~~~~~~~~~~------~~~~--~~~~~v~- 316 (620)
T COG1506 250 LDGEL-GEVDGDLSSGDDTRGAWAVEG-GLDGDGLLFIATDGGGSS--PLFRVDDLGGGV------EGLS--GDDGGVP- 316 (620)
T ss_pred Eeccc-cccceeeccCCcccCcHHhcc-ccCCCcEEEEEecCCCce--EEEEEeccCCce------eeec--CCCceEE-
Confidence 66222 2221111111 00 01111 1445677777766 4433 344443212111 1111 1111222
Q ss_pred CCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEEEEeeecCCCC-CCCceEEEEEEECCCCceeeEEEEEeCCccCCC
Q 010654 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFD-TNNYFTERKWASASDGTQIPICIVYRKNLVKLD 260 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~ 260 (505)
.++.+++.+++..+++..|+++|+++. +.+.+++... ...+. .....+|.+++++.||.+|+++++.|+++ ++.
T Consensus 317 -~f~~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~-~~~ 391 (620)
T COG1506 317 -GFDVDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSSN--NSGLKKVKLAEPEPVTYKSNDGETIHGWLYKPPGF-DPR 391 (620)
T ss_pred -EEeeCCCEEEEEecCCCCccceEEEcC-CCceEEeecc--cccccccccCCceEEEEEcCCCCEEEEEEecCCCC-CCC
Confidence 234488999999999999999999986 3332232211 11222 23458899999999999999999999998 777
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+++|+||++||||..+....|....|.|+++||+|+.+|+|||+|||++|.++..+.++..+++|++++++++.+.+.+|
T Consensus 392 k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 471 (620)
T COG1506 392 KKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVD 471 (620)
T ss_pred CCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcC
Confidence 88999999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCC-CHHHHHHHHhCChhhcc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW-KEEFYFYMKSYSPVDNV 419 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~sp~~~~ 419 (505)
++||+|+|+||||||+++++++.| +|+|+++.++.+++..++...+..+........+.+. +.+ .+.+.||+.++
T Consensus 472 ~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~sp~~~~ 547 (620)
T COG1506 472 PERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDRE---KYEDRSPIFYA 547 (620)
T ss_pred hHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcccChH---HHHhcChhhhh
Confidence 999999999999999999999866 9999999999999887765544432221111122232 333 34789999999
Q ss_pred cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 420 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 420 ~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
+++++| +|||||++|.+||++|+++|+++|+.+|+++++++|| +++|++... ......+..+++||.++++.
T Consensus 548 ~~i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p---~e~H~~~~~-~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 548 DNIKTP-LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP---DEGHGFSRP-ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred cccCCC-EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC---CCCcCCCCc-hhHHHHHHHHHHHHHHHhcC
Confidence 999998 9999999999999999999999999999999999999 779987652 33455666799999999874
No 6
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-35 Score=282.21 Aligned_cols=330 Identities=20% Similarity=0.243 Sum_probs=245.8
Q ss_pred EEEEEEecCCeeE--EEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 136 HLAVYEREGGLQK--ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 136 ~l~~~~~~~~~~~--l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
-++|..++++... +++......|. +. .++++.++.. ..++-+=+.++..+++...|+.+..+.+..++
T Consensus 517 LVYf~gt~d~PlE~hLyvvsye~~g~-~~--------rlt~~g~sh~-~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~ 586 (867)
T KOG2281|consen 517 LVYFVGTKDTPLEHHLYVVSYENPGE-IA--------RLTEPGYSHS-CELDQQCDHFVSYYSSVGSPPCVSLYSLSWPE 586 (867)
T ss_pred EEEEEccCCCCceeeEEEEEEecCCc-ee--------eccCCCcccc-hhhhhhhhhHhhhhhcCCCCceEEEEeccCCc
Confidence 4566677777554 55555442122 32 3334444432 12232333477888999999988887776654
Q ss_pred EE--EEEEe---eec-CCCCCCCc-eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCc---
Q 010654 214 SV--LKKIE---TVL-GGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFN--- 282 (505)
Q Consensus 214 ~~--~~~~~---~~~-~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~--- 282 (505)
-. .++.. -.. ....+..+ .+|.+.|.+..|..+.+.++.|.++ ++++|+|+++++||||+.+.. ..|.
T Consensus 587 ~~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-~pgkkYptvl~VYGGP~VQlVnnsfkgi~ 665 (867)
T KOG2281|consen 587 NDPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-QPGKKYPTVLNVYGGPGVQLVNNSFKGIQ 665 (867)
T ss_pred cCcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccC-CCCCCCceEEEEcCCCceEEeecccccee
Confidence 11 11111 011 12233344 5688899999999999999999998 999999999999999987642 2332
Q ss_pred -hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHH
Q 010654 283 -SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 283 -~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
...+.|+++||+|+.+|-|||...|.+|....+...|..+++|...++++|+++ |++|++||+|.|||||||+++..+
T Consensus 666 ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L 745 (867)
T KOG2281|consen 666 YLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGL 745 (867)
T ss_pred hhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHh
Confidence 235789999999999999999999999998888999999999999999999998 599999999999999999999999
Q ss_pred hhCCCceeEEEecCCchhhhhhccCCCCCCCcccc-c-ccCCCC-CHHHHHHHHhCChhhcccCC-CCC-eEEEEccCCC
Q 010654 361 NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW-E-EWGDPW-KEEFYFYMKSYSPVDNVKAQ-NYP-HILVTAGLND 435 (505)
Q Consensus 361 ~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~-~~g~~~-~~~~~~~~~~~sp~~~~~~~-~~P-p~Li~~G~~D 435 (505)
+++|+.|+++|+.+|+++|.-+ +. .| + .+|.|+ ++..| .+-|-..++.++ .-| .+|++||.-|
T Consensus 746 ~~~P~IfrvAIAGapVT~W~~Y--DT-------gYTERYMg~P~~nE~gY---~agSV~~~VeklpdepnRLlLvHGliD 813 (867)
T KOG2281|consen 746 AQYPNIFRVAIAGAPVTDWRLY--DT-------GYTERYMGYPDNNEHGY---GAGSVAGHVEKLPDEPNRLLLVHGLID 813 (867)
T ss_pred hcCcceeeEEeccCcceeeeee--cc-------cchhhhcCCCccchhcc---cchhHHHHHhhCCCCCceEEEEecccc
Confidence 9999999999999999998643 21 12 2 247784 44444 455777777776 333 4999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.+|++.+.-.+..+|.++|++.++++|| ++.|+...... ....-++++.|+.+
T Consensus 814 ENVHF~Hts~Lvs~lvkagKpyeL~IfP---~ERHsiR~~es-~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 814 ENVHFAHTSRLVSALVKAGKPYELQIFP---NERHSIRNPES-GIYYEARLLHFLQE 866 (867)
T ss_pred cchhhhhHHHHHHHHHhCCCceEEEEcc---ccccccCCCcc-chhHHHHHHHHHhh
Confidence 9999999999999999999999999999 66998754332 22233467888865
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=100.00 E-value=6.6e-36 Score=272.09 Aligned_cols=209 Identities=32% Similarity=0.460 Sum_probs=170.3
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 010654 279 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358 (505)
Q Consensus 279 ~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~ 358 (505)
+.|+...+.|+++||+|+.+|+||++++|.+|...+...++..+++|+.+++++|++++.+|++||+|+|+|+||++++.
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 35777788999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCC-CCHHHHHHHHhCChhhcccC--CCCCeEEEEccCCC
Q 010654 359 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP-WKEEFYFYMKSYSPVDNVKA--QNYPHILVTAGLND 435 (505)
Q Consensus 359 ~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~sp~~~~~~--~~~Pp~Li~~G~~D 435 (505)
++.++|++|+++++.+|++|+......... +....+.+++.+ ..++.+.. .+|+..+.+ ++.| +||+||++|
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~~~~~P-~li~hG~~D 155 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLFSYYGTTDI-YTKAEYLEYGDPWDNPEFYRE---LSPISPADNVQIKPP-VLIIHGEND 155 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTTCSBHHTCC-HHHGHHHHHSSTTTSHHHHHH---HHHGGGGGGCGGGSE-EEEEEETTB
T ss_pred hhcccceeeeeeeccceecchhcccccccc-cccccccccCccchhhhhhhh---hccccccccccCCCC-EEEEccCCC
Confidence 999999999999999999998766543222 112133456666 46665544 456666666 5665 999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
.+||+.++.+++++|+++|+++++++|| ++||++..... ..+...++++||+++|+.
T Consensus 156 ~~Vp~~~s~~~~~~L~~~g~~~~~~~~p---~~gH~~~~~~~-~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 156 PRVPPSQSLRLYNALRKAGKPVELLIFP---GEGHGFGNPEN-RRDWYERILDFFDKYLKK 212 (213)
T ss_dssp SSSTTHHHHHHHHHHHHTTSSEEEEEET---T-SSSTTSHHH-HHHHHHHHHHHHHHHTT-
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcC---cCCCCCCCchh-HHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999 78997764433 335677899999999974
No 8
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-32 Score=286.35 Aligned_cols=391 Identities=18% Similarity=0.189 Sum_probs=262.6
Q ss_pred eeeeCCEE-EEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCc-eeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 83 ASHRGNHF-FITRRSDELFNSELLACPVDNTSETTVLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 83 ~s~dg~~l-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
++.|+.+. ++....++. -.++..+..........+....++. .|..+.-..+.++|.+...+..+..+|.+++....
T Consensus 347 ~~~d~~~~~~~~~~~~~~-~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~ 425 (755)
T KOG2100|consen 347 FSSDGSSYLKVDSVSDGG-YNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSGT 425 (755)
T ss_pred EeecCCceeEEEeeccCC-EEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEccccc
Confidence 66676443 433433322 3466666665422222222222221 12222212347888888765666666666554444
Q ss_pred ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEE-EEECCCCcEEEEEEee--e-cCCCCCCCc-eEEE
Q 010654 161 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVY-DYDMDMGISVLKKIET--V-LGGFDTNNY-FTER 235 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~--~-~~~~~~~~~-~~~~ 235 (505)
...+++.. .+ . ...+-..+++.....++..++.|..|...+ +.+... ......+.. . ...+....+ ..+.
T Consensus 426 ~~~lt~~~-~~--~-~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~-~~~~~~Le~n~~~~~~~~~~~~p~~~~ 500 (755)
T KOG2100|consen 426 VESLTCSL-IT--G-PCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKN-SKTIVVLETNEELKKTIENVALPIVEF 500 (755)
T ss_pred cccccccC-CC--C-cceEEEEecCCcccEEEEEccCCCCCcceeecccccc-ceEEEEeccChhhHHHhhcccCCccee
Confidence 44444321 11 1 111112344556778888888888885412 111111 111222211 1 111111122 1222
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC-CC--chhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~-~~--~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
..+.. ||....+.++.|+++ .+.+++|++|.+||||+++... .| +.....+..+|++|+.+|+||+|++|.+++.
T Consensus 501 ~~i~~-~~~~~~~~~~lP~~~-~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 501 GKIEI-DGITANAILILPPNF-DPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred EEEEe-ccEEEEEEEecCCCC-CCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH
Confidence 22333 889999999999999 8888999999999999854322 12 2233567789999999999999999999999
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC-CceeEEEecCCchhhhhhccCCCCCCC
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP-DLFKAAVAAVPFVDVLTTMLDPTIPLT 391 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p-~~~~a~v~~~~~~d~~~~~~~~~~~~~ 391 (505)
+..+.+|..+++|...+++++.+++++|++||+|+|+|||||+++.++..++ +.|+|+++.+|++||. + .+...
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~-yds~~--- 653 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-Y-YDSTY--- 653 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-e-ecccc---
Confidence 9999999999999999999999999999999999999999999999999887 8999999999999987 3 33221
Q ss_pred cccccc-cCCC-CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 392 TAEWEE-WGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 392 ~~~~~~-~g~~-~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
-++ +|.| .+...| .+.++..++..++.|.+|++||+.|.+|+++|+.+++++|+.+|+++++++|| ++.
T Consensus 654 ---terymg~p~~~~~~y---~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vyp---de~ 724 (755)
T KOG2100|consen 654 ---TERYMGLPSENDKGY---EESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYP---DEN 724 (755)
T ss_pred ---cHhhcCCCccccchh---hhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeC---CCC
Confidence 122 3666 333334 56788888888888867999999999999999999999999999999999999 669
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|++..... ....+..+..||..+++.
T Consensus 725 H~is~~~~-~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 725 HGISYVEV-ISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred cccccccc-hHHHHHHHHHHHHHHcCc
Confidence 98765331 122334578899976654
No 9
>PRK13604 luxD acyl transferase; Provisional
Probab=99.90 E-value=2.5e-22 Score=185.87 Aligned_cols=226 Identities=16% Similarity=0.119 Sum_probs=157.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCC-CCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~g~~~ 310 (505)
.+....+.+.||..|.+|+..|++. ...+.|+||++||-.... ..|.....+|+++||+|+.+|.||+ |+++.++
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 3344456788999999998888643 246779999999965543 2255667899999999999999887 7776666
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCC---
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT--- 387 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~--- 387 (505)
..... .....|+.++++|+.+++ .++|+++|+|+||.++..++.. + ..+++|+.+|+.++...+....
T Consensus 84 ~~~t~----s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~-~-~v~~lI~~sp~~~l~d~l~~~~~~~ 154 (307)
T PRK13604 84 DEFTM----SIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINE-I-DLSFLITAVGVVNLRDTLERALGYD 154 (307)
T ss_pred ccCcc----cccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcC-C-CCCEEEEcCCcccHHHHHHHhhhcc
Confidence 43211 123699999999998863 4689999999999998666663 3 4899999999998654432100
Q ss_pred ---CCCCcc-ccccc-CCCC-CHHHHHHHH------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCC
Q 010654 388 ---IPLTTA-EWEEW-GDPW-KEEFYFYMK------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT 455 (505)
Q Consensus 388 ---~~~~~~-~~~~~-g~~~-~~~~~~~~~------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~ 455 (505)
++.... ....+ |..- ......... ..+|+..+++++.| +|+|||.+|..||++++++++++++. .
T Consensus 155 ~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~P-vLiIHG~~D~lVp~~~s~~l~e~~~s--~ 231 (307)
T PRK13604 155 YLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIP-FIAFTANNDSWVKQSEVIDLLDSIRS--E 231 (307)
T ss_pred cccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCC-EEEEEcCCCCccCHHHHHHHHHHhcc--C
Confidence 010000 00001 1111 011111111 24566778888887 99999999999999999999998764 3
Q ss_pred CCCeEEEEecCCCCCCCCCCh
Q 010654 456 DDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~~~~ 476 (505)
+.+++.++ |+.|.+.++.
T Consensus 232 ~kkl~~i~---Ga~H~l~~~~ 249 (307)
T PRK13604 232 QCKLYSLI---GSSHDLGENL 249 (307)
T ss_pred CcEEEEeC---CCccccCcch
Confidence 56788888 9999887653
No 10
>PRK10566 esterase; Provisional
Probab=99.90 E-value=2.2e-22 Score=187.97 Aligned_cols=231 Identities=16% Similarity=0.162 Sum_probs=149.9
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC-chhHHHcccc--cCCcc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGKF--LKKKN 321 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~-g~~~~~~~~~--~~~~~ 321 (505)
.+....+.|++. .+++.|+||++||.++... .|......|+++||.|+.+|+||+|.. +......... .....
T Consensus 11 ~~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK10566 11 GIEVLHAFPAGQ--RDTPLPTVFFYHGFTSSKL--VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQ 86 (249)
T ss_pred CcceEEEcCCCC--CCCCCCEEEEeCCCCcccc--hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHH
Confidence 344555667642 3456899999999866542 355567889999999999999998742 1100000000 00113
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEE-ecCCchhhhhh-ccCCCCCCCcccccccC
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV-AAVPFVDVLTT-MLDPTIPLTTAEWEEWG 399 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v-~~~~~~d~~~~-~~~~~~~~~~~~~~~~g 399 (505)
.++|+.++++++.+++.+|++||+++|+|+||++++.++.++|+...+++ ..++....... ...... . .. ...
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~-~~~ 161 (249)
T PRK10566 87 NMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLI-P---ET-AAQ 161 (249)
T ss_pred HHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhccccc-c---cc-ccc
Confidence 46888889999999888999999999999999999999998886543332 22332221111 000000 0 00 000
Q ss_pred CCCCHHHHHHHHhCChhhcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC--CCeEEEEecCCCCCCCCCCh
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD--DNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~--~~~~~~~~~~~~gH~~~~~~ 476 (505)
.....+.+..+..+++...+.++ ++| +|++||++|..||+.++++++++|+.+|.+ ++++.|+ +.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~---~~~H~~~--- 234 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQLADRP-LLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEP---GVRHRIT--- 234 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhhcCCCC-EEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecC---CCCCccC---
Confidence 00011112223445665666666 677 999999999999999999999999999875 5667777 8899763
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 010654 477 FERLREAAFTYTFLMRAL 494 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l 494 (505)
.. .+..+.+||+++|
T Consensus 235 ~~---~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 PE---ALDAGVAFFRQHL 249 (249)
T ss_pred HH---HHHHHHHHHHhhC
Confidence 22 3456899999875
No 11
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=4.6e-21 Score=189.99 Aligned_cols=240 Identities=17% Similarity=0.121 Sum_probs=156.8
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+.+.++..||..|+++++.|+. .++.|+||+. ||.++.....|......|+++||+|+.+|+||.|....
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~----~~~~P~Vli~-gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG----DGPFPTVLVC-GGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC----CCCccEEEEe-CCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 44678999999999899999988873 2567887765 44444333335555678999999999999999876532
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc--CCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML--DPT 387 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~--~~~ 387 (505)
+ ...........+++++|.+.+.+|++||+++|+|+||++++.++..+|++++++|+..|+.+...... ...
T Consensus 239 ~------~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 W------KLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred C------CccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 1 00111222335788999999999999999999999999999999888999999999988765211000 001
Q ss_pred CCCCcc-cc-cccCCC-CC-HHHHHHHHhCChh--hc-ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeE
Q 010654 388 IPLTTA-EW-EEWGDP-WK-EEFYFYMKSYSPV--DN-VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 388 ~~~~~~-~~-~~~g~~-~~-~~~~~~~~~~sp~--~~-~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~ 460 (505)
.+.... .+ ..+|.+ .+ ......+..++.. .. ..++++| +|++||++|++||+++++.+.+... +.+++
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~P-vLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~ 387 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTP-MLSGYWKNDPFSPEEDSRLIASSSA----DGKLL 387 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCc-EEEEecCCCCCCCHHHHHHHHHhCC----CCeEE
Confidence 110000 00 112332 12 2222233333321 11 2467888 9999999999999999987765443 45678
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
.++ +. |.. .. +. ..+..+.+||.++|
T Consensus 388 ~i~---~~-~~~-e~-~~--~~~~~i~~wL~~~l 413 (414)
T PRK05077 388 EIP---FK-PVY-RN-FD--KALQEISDWLEDRL 413 (414)
T ss_pred Ecc---CC-Ccc-CC-HH--HHHHHHHHHHHHHh
Confidence 888 43 322 22 22 23445899999876
No 12
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.88 E-value=8.3e-22 Score=187.10 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=163.1
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
..+....+.|.+.+|..|.++++.|++. .++.|+||..||..+.... + .....|+.+||+|+.+|.||.++...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~~--~-~~~~~~a~~G~~vl~~d~rGqg~~~~ 125 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSGD--P-FDLLPWAAAGYAVLAMDVRGQGGRSP 125 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GGG--H-HHHHHHHHTT-EEEEE--TTTSSSS-
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCCC--c-ccccccccCCeEEEEecCCCCCCCCC
Confidence 3567888999999999999999999854 4789999999986544211 1 12346899999999999999985433
Q ss_pred hHHHc------ccccCC----------cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 309 QWYEN------GKFLKK----------KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 309 ~~~~~------~~~~~~----------~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
+.... +....+ ...+.|+..++++|.+++.+|++||+++|.|.||.+++.+++..+ +++++++
T Consensus 126 d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~ 204 (320)
T PF05448_consen 126 DYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAA 204 (320)
T ss_dssp B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEE
T ss_pred CccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEe
Confidence 32110 010111 135799999999999999999999999999999999999999865 7999999
Q ss_pred cCCc-hhhhhhccCC--CCCCCc-ccccccCCC---CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 373 AVPF-VDVLTTMLDP--TIPLTT-AEWEEWGDP---WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 373 ~~~~-~d~~~~~~~~--~~~~~~-~~~~~~g~~---~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
..|+ .|+...+... ..+... ..|..+.++ ..++.++.+.-++..+.+++|++| +|+..|-.|+.|||.....
T Consensus 205 ~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~p-vl~~~gl~D~~cPP~t~fA 283 (320)
T PF05448_consen 205 DVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCP-VLFSVGLQDPVCPPSTQFA 283 (320)
T ss_dssp ESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SE-EEEEEETT-SSS-HHHHHH
T ss_pred cCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCC-EEEEEecCCCCCCchhHHH
Confidence 9885 4543332111 111111 112222222 356677888889999999999998 9999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.+++|.. +.++++|| ..||.... .. .....+.||.+|
T Consensus 284 ~yN~i~~---~K~l~vyp---~~~He~~~---~~--~~~~~~~~l~~~ 320 (320)
T PF05448_consen 284 AYNAIPG---PKELVVYP---EYGHEYGP---EF--QEDKQLNFLKEH 320 (320)
T ss_dssp HHCC--S---SEEEEEET---T--SSTTH---HH--HHHHHHHHHHH-
T ss_pred HHhccCC---CeeEEecc---CcCCCchh---hH--HHHHHHHHHhcC
Confidence 9999864 45789998 67886431 11 112468898765
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=7e-21 Score=185.41 Aligned_cols=257 Identities=12% Similarity=0.072 Sum_probs=165.1
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+...+.+.||.+|++....|++. ....|+||++||..... ...|......|+++||.|+.+|+||+|.+...
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~ 104 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL 104 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 345566678889999999876666542 23568999999985432 33344445678899999999999999876421
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc-----
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML----- 384 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----- 384 (505)
. +.........+|+.++++++......+..++.|+|+|+||.+++.++.++|++++++|+.+|..+....+.
T Consensus 105 ~---~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 181 (330)
T PLN02298 105 R---AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPI 181 (330)
T ss_pred c---ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHH
Confidence 0 11112224578999999999876444456799999999999999999999999999999888653211100
Q ss_pred -------CCCCCCCc--ccccccCC-CCCHHHHHHHHhCC----------------------hhhcccCCCCCeEEEEcc
Q 010654 385 -------DPTIPLTT--AEWEEWGD-PWKEEFYFYMKSYS----------------------PVDNVKAQNYPHILVTAG 432 (505)
Q Consensus 385 -------~~~~~~~~--~~~~~~g~-~~~~~~~~~~~~~s----------------------p~~~~~~~~~Pp~Li~~G 432 (505)
....+... ........ ...+. ...+...+ ....+.++++| +||+||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G 259 (330)
T PLN02298 182 PQILTFVARFLPTLAIVPTADLLEKSVKVPA-KKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP-FIVLHG 259 (330)
T ss_pred HHHHHHHHHHCCCCccccCCCcccccccCHH-HHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC-EEEEec
Confidence 00000000 00000000 00000 00000011 12345677887 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH--HHHHHHHHHHHHHhhCCCCCC
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER--LREAAFTYTFLMRALSMLPSV 500 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~--~~~~~~~~~fl~~~l~~~~~~ 500 (505)
++|..||+.+++++++++...+ .++++|+ +++|......+.. ......+.+||.++++....+
T Consensus 260 ~~D~ivp~~~~~~l~~~i~~~~--~~l~~~~---~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 260 SADVVTDPDVSRALYEEAKSED--KTIKIYD---GMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred CCCCCCCHHHHHHHHHHhccCC--ceEEEcC---CcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999998876433 4678887 8899764333322 222445899999999765443
No 14
>PLN02442 S-formylglutathione hydrolase
Probab=99.87 E-value=6.7e-21 Score=180.09 Aligned_cols=245 Identities=16% Similarity=0.123 Sum_probs=154.9
Q ss_pred ceEEEEEEEC-CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCC---
Q 010654 231 YFTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGE--- 305 (505)
Q Consensus 231 ~~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~--- 305 (505)
...+.+++.| .-|..+++.+++|+. ..++++|+|+++||+++......... ..+.+...|++|++||..++|.
T Consensus 16 ~~~~~~~~~s~~l~~~~~~~vy~P~~--~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~ 93 (283)
T PLN02442 16 GFNRRYKHFSSTLGCSMTFSVYFPPA--SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVE 93 (283)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCc--ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCC
Confidence 3455666655 356789999999984 34568999999999876543322212 2245566799999999765441
Q ss_pred ---------CchhHH-HcccccCCc-----chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEE
Q 010654 306 ---------LGRQWY-ENGKFLKKK-----NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 370 (505)
Q Consensus 306 ---------~g~~~~-~~~~~~~~~-----~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~ 370 (505)
++..+. +.....++. ...+++...++... ..+|+++++|+|+|+||++++.++.++|++|+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~ 171 (283)
T PLN02442 94 GEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSV 171 (283)
T ss_pred CCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEE
Confidence 111111 111111111 12233333333322 2368899999999999999999999999999999
Q ss_pred EecCCchhhhhhccCCCCCCCcccc-cccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCC-hHHHHHH
Q 010654 371 VAAVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-EPAKFVA 448 (505)
Q Consensus 371 v~~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~-~~~~~~~ 448 (505)
++.+|+.++.... ...... ..+|.+ ++.++.....+|+.++...+.| +|++||++|+.|+.. ++..+++
T Consensus 172 ~~~~~~~~~~~~~------~~~~~~~~~~g~~--~~~~~~~d~~~~~~~~~~~~~p-vli~~G~~D~~v~~~~~s~~~~~ 242 (283)
T PLN02442 172 SAFAPIANPINCP------WGQKAFTNYLGSD--KADWEEYDATELVSKFNDVSAT-ILIDQGEADKFLKEQLLPENFEE 242 (283)
T ss_pred EEECCccCcccCc------hhhHHHHHHcCCC--hhhHHHcChhhhhhhccccCCC-EEEEECCCCccccccccHHHHHH
Confidence 9999998743110 000011 123433 2223223344555566556776 999999999999974 6899999
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
+|+++|.++++.+++ +.+|... .....+.+.+.|..++++
T Consensus 243 ~l~~~g~~~~~~~~p---g~~H~~~----~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 243 ACKEAGAPVTLRLQP---GYDHSYF----FIATFIDDHINHHAQALK 282 (283)
T ss_pred HHHHcCCCeEEEEeC---CCCccHH----HHHHHHHHHHHHHHHHhc
Confidence 999999999999998 7799642 111222234556655553
No 15
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.87 E-value=2e-20 Score=176.63 Aligned_cols=243 Identities=17% Similarity=0.152 Sum_probs=156.3
Q ss_pred eEEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHH-HCCcEEEEEcc--cCCCCCc
Q 010654 232 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQI--RGGGELG 307 (505)
Q Consensus 232 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~d~--rG~~~~g 307 (505)
..+.+.+.+. -|..+++.++.|++. . .++.|+|+++||.++......+....+.++ +.|++|++||. ||++..+
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQA-A-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCc-c-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 4455555544 456788888999874 2 356899999999876554433333344555 46999999997 6665333
Q ss_pred h--hHH---------HcccccCC--cchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec
Q 010654 308 R--QWY---------ENGKFLKK--KNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 373 (505)
Q Consensus 308 ~--~~~---------~~~~~~~~--~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~ 373 (505)
. .|. +.....+. ......+...+..+++. ..+|++|++|+|+||||++++.++.++|++|+++++.
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~ 169 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAF 169 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEE
Confidence 1 111 00000111 12233344444444443 3478899999999999999999999999999999999
Q ss_pred CCchhhhhhccCCCCCCCccccc-ccCCCCCHHHHHHHHhCChhhcccCC-CCCeEEEEccCCCCCCCC-ChHHHHHHHH
Q 010654 374 VPFVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMY-SEPAKFVAKL 450 (505)
Q Consensus 374 ~~~~d~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~~~~~-~~Pp~Li~~G~~D~~vp~-~~~~~~~~~L 450 (505)
+|+.+.... +....... .++.+. +.+ ...+|...+.+. ..||+++.||+.|+.||. .++.++.++|
T Consensus 170 ~~~~~~~~~------~~~~~~~~~~l~~~~--~~~---~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l 238 (275)
T TIGR02821 170 APIVAPSRC------PWGQKAFSAYLGADE--AAW---RSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQAC 238 (275)
T ss_pred CCccCcccC------cchHHHHHHHhcccc--cch---hhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHH
Confidence 999774311 11110111 123221 111 234555444432 244699999999999999 6899999999
Q ss_pred HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 451 REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+++|+++++..++ |.+|++..- ...+...+.|+.+++
T Consensus 239 ~~~g~~v~~~~~~---g~~H~f~~~----~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 239 RAAGQALTLRRQA---GYDHSYYFI----ASFIADHLRHHAERL 275 (275)
T ss_pred HHcCCCeEEEEeC---CCCccchhH----HHhHHHHHHHHHhhC
Confidence 9999999999998 889976421 122334677777653
No 16
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.85 E-value=2.5e-19 Score=188.90 Aligned_cols=261 Identities=16% Similarity=0.192 Sum_probs=180.0
Q ss_pred CCCCCCceEEEEEEECC-----CCc--eeeEEEEEeCCccCCCCCCcEEEEE---cCCCCcC------------C--C--
Q 010654 225 GFDTNNYFTERKWASAS-----DGT--QIPICIVYRKNLVKLDGSDPLLLYG---YGSYEIC------------N--D-- 278 (505)
Q Consensus 225 ~~~~~~~~~~~~~~~s~-----dG~--~i~~~l~~p~~~~~~~~~~P~iv~~---hGg~~~~------------~--~-- 278 (505)
-++...+..|.|++.+. ||. .|.+.|++|+.. ..+-|.|+|+-. |.|.... . .
T Consensus 162 ~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~-~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 162 VFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKET-ASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred ccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCcc-CCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 35566677888888763 564 688899999876 334478888864 3332000 0 0
Q ss_pred --------------------CC-----CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHH
Q 010654 279 --------------------PA-----FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL 333 (505)
Q Consensus 279 --------------------~~-----~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 333 (505)
.. .....++|+++||+|+++|.||.++++..+. ..+..+.+|..++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-----~~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPT-----TGDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCc-----cCCHHHHHHHHHHHHHH
Confidence 00 0123478999999999999999998877553 34457889999999999
Q ss_pred HHcC--CCC------------CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccc----
Q 010654 334 IKNC--YCT------------KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW---- 395 (505)
Q Consensus 334 ~~~~--~~d------------~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~---- 395 (505)
..+. +.| ..|||++|.||||++++.+|+..|..++|+|+.+++.+|..++...........|
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged 395 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGED 395 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcc
Confidence 9542 223 4799999999999999999998888999999999999886654321110000000
Q ss_pred ----cc--------cCCC-CCH-------------------HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChH
Q 010654 396 ----EE--------WGDP-WKE-------------------EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP 443 (505)
Q Consensus 396 ----~~--------~g~~-~~~-------------------~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~ 443 (505)
.+ .+.. ... ..-+++.+.+++.++.++++| +|++||..|.+|++.++
T Consensus 396 ~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvP-vLlIhGw~D~~V~~~~s 474 (767)
T PRK05371 396 LDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKAS-VLVVHGLNDWNVKPKQV 474 (767)
T ss_pred hhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCC-EEEEeeCCCCCCChHHH
Confidence 00 0000 000 011234566888889999998 99999999999999999
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 444 AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 444 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.+++++|++++++.++++.+ .+|..... ....+....+.+||+++|+..
T Consensus 475 ~~ly~aL~~~g~pkkL~l~~----g~H~~~~~-~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 475 YQWWDALPENGVPKKLFLHQ----GGHVYPNN-WQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred HHHHHHHHhcCCCeEEEEeC----CCccCCCc-hhHHHHHHHHHHHHHhccccC
Confidence 99999999999988876654 47854322 223333446789999998643
No 17
>PRK10162 acetyl esterase; Provisional
Probab=99.85 E-value=1.5e-19 Score=173.86 Aligned_cols=235 Identities=15% Similarity=0.105 Sum_probs=160.3
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCCchhHHHHHH-CCcEEEEEcccCCCCCch
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~ 308 (505)
...+.+.+++.+| .|++.+++|... ..|+||++|||.....+ ..+......|+. .|+.|+.+|||.+.+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~~-----~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-- 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQPD-----SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-- 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCCC-----CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC--
Confidence 3467788888888 599998888532 35999999998754333 234455667777 5999999999987642
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchhh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDV 379 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~ 379 (505)
.....++|+.++++|+.++ -.+|++||+|+|+|+||.+++.++.+. +..+++++..+|+++.
T Consensus 127 ---------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 127 ---------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ---------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 1234689999999999764 347899999999999999999888642 3568889999998874
Q ss_pred hhhc----cCCCC-CCCcccc----ccc-CCCCCHHHHHHHHhCChhhcc--cCC--CCCeEEEEccCCCCCCCCChHHH
Q 010654 380 LTTM----LDPTI-PLTTAEW----EEW-GDPWKEEFYFYMKSYSPVDNV--KAQ--NYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 380 ~~~~----~~~~~-~~~~~~~----~~~-g~~~~~~~~~~~~~~sp~~~~--~~~--~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
.... ..... .+....+ ..| +++.+ ..+|+... ..+ ..||++|++|+.|+.+ .+++.
T Consensus 198 ~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~--------~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~ 267 (318)
T PRK10162 198 RDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDAD--------RESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRL 267 (318)
T ss_pred CCChhHHHhCCCccccCHHHHHHHHHHhCCCccc--------cCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHH
Confidence 2110 00000 0100000 001 11110 11232111 112 4678999999999987 69999
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCC---ChHHHHHHHHHHHHHHHHhhC
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKS---GRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~ 495 (505)
++++|+++|++++++.|+ |..|++.. ...+..+.+..+.+||.++|+
T Consensus 268 ~~~~L~~aGv~v~~~~~~---g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 268 LYQTLAAHQQPCEFKLYP---GTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHHcCCCEEEEEEC---CCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998 88997632 122334445567889998875
No 18
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=4.7e-20 Score=161.50 Aligned_cols=229 Identities=21% Similarity=0.254 Sum_probs=168.5
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
....++-.++|++.+|.+|.+|++.|... .++.|+||..||-.+....+ .....|+..||+|+.+|.||.|++-
T Consensus 51 ~~~ve~ydvTf~g~~g~rI~gwlvlP~~~---~~~~P~vV~fhGY~g~~g~~---~~~l~wa~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 51 LPRVEVYDVTFTGYGGARIKGWLVLPRHE---KGKLPAVVQFHGYGGRGGEW---HDMLHWAVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred CCceEEEEEEEeccCCceEEEEEEeeccc---CCccceEEEEeeccCCCCCc---cccccccccceeEEEEecccCCCcc
Confidence 34567888999999999999999999875 38899999999855544321 1235688999999999999998773
Q ss_pred hhH------------HHcccccCC-----cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEE
Q 010654 308 RQW------------YENGKFLKK-----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 370 (505)
Q Consensus 308 ~~~------------~~~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~ 370 (505)
.+- +..+..+.+ ...+.|+..+++-+.+...+|++||++.|+|.||.+++.+++..| +++++
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~ 203 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAV 203 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcc
Confidence 311 101111101 146899999999999999999999999999999999999999755 89999
Q ss_pred EecCCchhhhhhccCCCCCCCcccccc------cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHH
Q 010654 371 VAAVPFVDVLTTMLDPTIPLTTAEWEE------WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 371 v~~~~~~d~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
++..|++.-.....+ + .....|.+ .-.|...+.++.+.-++-.+.+.+++.| +|+..|..|++|||....
T Consensus 204 ~~~~Pfl~df~r~i~--~-~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~p-vL~svgL~D~vcpPstqF 279 (321)
T COG3458 204 VADYPFLSDFPRAIE--L-ATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVP-VLMSVGLMDPVCPPSTQF 279 (321)
T ss_pred cccccccccchhhee--e-cccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccc-eEEeecccCCCCCChhhH
Confidence 999998642222211 1 11122222 1233455667777777777888899998 999999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 445 KFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
.++++|...+ ++.+|+.. +|...
T Consensus 280 A~yN~l~~~K---~i~iy~~~---aHe~~ 302 (321)
T COG3458 280 AAYNALTTSK---TIEIYPYF---AHEGG 302 (321)
T ss_pred HHhhcccCCc---eEEEeecc---ccccC
Confidence 9999986543 45677743 58543
No 19
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.84 E-value=2.1e-20 Score=170.58 Aligned_cols=205 Identities=19% Similarity=0.207 Sum_probs=139.1
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCC-Cchh----HHHc--ccccC
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE-LGRQ----WYEN--GKFLK 318 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~-~g~~----~~~~--~~~~~ 318 (505)
|.+++..|++. ++.|.||++|+.+|-. .........|+++||.|++||+-+..+ .... .... .....
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 46788888763 6789999999987643 222234568899999999999755444 1111 1100 00111
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccccc
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 398 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 398 (505)
......|+.+++++|.+++.++.+||+++|+|+||.+++.++.+. +.++++|+..|. ..
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~----------~~---------- 133 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGG----------SP---------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-S----------SS----------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCC----------CC----------
Confidence 224568889999999999888899999999999999999998865 688999998880 00
Q ss_pred CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCC---
Q 010654 399 GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG--- 475 (505)
Q Consensus 399 g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--- 475 (505)
+ ..+.....++++| +|+++|++|+.+|.++..++.++|++++.++++.+|+ |.+|++...
T Consensus 134 --~-----------~~~~~~~~~~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~---ga~HgF~~~~~~ 196 (218)
T PF01738_consen 134 --P-----------PPPLEDAPKIKAP-VLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYP---GAGHGFANPSRP 196 (218)
T ss_dssp --G-----------GGHHHHGGG--S--EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEET---T--TTTTSTTST
T ss_pred --C-----------CcchhhhcccCCC-EeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECC---CCcccccCCCCc
Confidence 0 0122234556676 9999999999999999999999999999999999999 889987321
Q ss_pred ---hHHHHHHHHHHHHHHHHhh
Q 010654 476 ---RFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 476 ---~~~~~~~~~~~~~fl~~~l 494 (505)
.....+.+.++++||.++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 1223445667899998876
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.83 E-value=4.7e-19 Score=173.68 Aligned_cols=251 Identities=16% Similarity=0.146 Sum_probs=158.8
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
+..+...+.+.||.+|.+....|++. .+.|+||++||..... ...|......|+++||.|+.+|+||+|.+....
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 133 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTC-TFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH 133 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCcc-chHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 34444556678999998887777543 4568999999975432 222344556788899999999999998654210
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc------
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML------ 384 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~------ 384 (505)
+........++|+.+.++.+..+...++.++.++|||+||.+++.++.++|++++++|+.+|+........
T Consensus 134 ---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 134 ---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred ---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH
Confidence 01111123466777777777655444556899999999999999999999999999999888643211000
Q ss_pred ------CCCCCC----Ccccccc--cCC----------------C-CCHHHHHHHHhC-ChhhcccCCCCCeEEEEccCC
Q 010654 385 ------DPTIPL----TTAEWEE--WGD----------------P-WKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGLN 434 (505)
Q Consensus 385 ------~~~~~~----~~~~~~~--~g~----------------~-~~~~~~~~~~~~-sp~~~~~~~~~Pp~Li~~G~~ 434 (505)
....+. ....+.. +.. + .-....+.+... +....+.++++| +|++||++
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P-~Lii~G~~ 289 (349)
T PLN02385 211 QILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLP-LLILHGEA 289 (349)
T ss_pred HHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCC-EEEEEeCC
Confidence 000000 0000000 000 0 000111111111 112345677898 99999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH--HHHHHHHHHHHHHhhC
Q 010654 435 DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER--LREAAFTYTFLMRALS 495 (505)
Q Consensus 435 D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~--~~~~~~~~~fl~~~l~ 495 (505)
|..||+..++++++.+... ..++++|+ ++||....+.++. ...+..+.+||.+++.
T Consensus 290 D~vv~~~~~~~l~~~~~~~--~~~l~~i~---~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 290 DKVTDPSVSKFLYEKASSS--DKKLKLYE---DAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCccChHHHHHHHHHcCCC--CceEEEeC---CCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999998877543 35678888 8899875444432 2234568999998864
No 21
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.83 E-value=1.4e-19 Score=164.20 Aligned_cols=192 Identities=11% Similarity=0.121 Sum_probs=127.1
Q ss_pred EEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhH--HHcccccCCcchHHH
Q 010654 249 CIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQW--YENGKFLKKKNTFTD 325 (505)
Q Consensus 249 ~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~--~~~~~~~~~~~~~~D 325 (505)
+++.|++. .+++|+||++||+++........ .......+.||+|+.||+||+++.+..| ...........+..|
T Consensus 2 ~ly~P~~~---~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 2 YVYVPAGL---TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred EEEcCCCC---CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 56778765 36789999999987653321111 1123344579999999999987554332 211111223456788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHH
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 405 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 405 (505)
+...++++.++..+|++||+|+|+|+||++++.++.++|++|+++++.++..-.... ... ........+....
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~----~~~---~~~~~~~~~~~~~ 151 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS----SSI---SATPQMCTAATAA 151 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc----cch---hhHhhcCCCCCHH
Confidence 999999999988899999999999999999999999999999999888775321100 000 0011111112222
Q ss_pred HHH-HHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 406 FYF-YMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 406 ~~~-~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
.+. .+.... .......|+++|+||++|.+||+..+++++++|++.
T Consensus 152 ~~~~~~~~~~---~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQ---SEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccC---CcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 221 112111 111225666899999999999999999999999986
No 22
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=99.82 E-value=4.4e-18 Score=171.02 Aligned_cols=202 Identities=32% Similarity=0.558 Sum_probs=156.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCce-EEEEEEeCCCcEEEEEeccccc-eEEEEEeCCCC---C-ceeeeecccccee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKIT-RFVFYLDVSKP---E-ELRVLTPRVVGVD 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~-~~~~~~SpDg~~i~~~~~~~~~-~~l~~~d~~~~---~-~~~~l~~~~~~~~ 80 (505)
|++||+|++||++.++++||+++++.+ .+++.+|+||++|++.+.+... +++|++|+.++ . .++++.++..+..
T Consensus 201 ~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 201 PRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp CEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred CcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 999999999999888999999988888 8899999999999999888766 99999999985 2 5888888887888
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
+.+.+.|+.||+.++. ++++++|+.++++.+....| ++++..+..+.++..++++|++..++++.++|.++++..
T Consensus 281 ~~v~~~~~~~yi~Tn~-~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~- 358 (414)
T PF02897_consen 281 YYVDHHGDRLYILTND-DAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDD- 358 (414)
T ss_dssp EEEEEETTEEEEEE-T-T-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT--
T ss_pred EEEEccCCEEEEeeCC-CCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCC-
Confidence 8888889999999996 56889999999987543233 667777778999999999999999999999999999861
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcEEEE
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 217 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (505)
+... ..+.+|... .+.+.+.+++++.+.|.++|+++|+.+|.+|+.+++.++.
T Consensus 359 ~~~~------~~~~~p~~g-~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~ 411 (414)
T PF02897_consen 359 GKES------REIPLPEAG-SVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLL 411 (414)
T ss_dssp TEEE------EEEESSSSS-EEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEE
T ss_pred CcEE------eeecCCcce-EEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEE
Confidence 2211 233444332 2333455678999999999999999999999999985443
No 23
>PHA02857 monoglyceride lipase; Provisional
Probab=99.81 E-value=1.5e-18 Score=164.71 Aligned_cols=238 Identities=16% Similarity=0.115 Sum_probs=153.7
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
+.+.||.++++.++.|.+ .+.|+|+++||.... ...|......|+++||.|+.+|+||+|.+.... ....
T Consensus 5 ~~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~ 74 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMID 74 (276)
T ss_pred eecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcC
Confidence 345699999998776632 345889899997544 334666678899999999999999998753211 0011
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------------cc
Q 010654 318 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------ML 384 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------------~~ 384 (505)
.....++|+...++++.+.. ...++.++|+|+||.+++.++..+|++++++|..+|..+.... ..
T Consensus 75 ~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~ 152 (276)
T PHA02857 75 DFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFY 152 (276)
T ss_pred CHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhC
Confidence 11234677878887776542 2357999999999999999999999999999999987542110 00
Q ss_pred CCCCC-CCcccc--------ccc-CCC------CCHHHHHHHHhC--ChhhcccCCCCCeEEEEccCCCCCCCCChHHHH
Q 010654 385 DPTIP-LTTAEW--------EEW-GDP------WKEEFYFYMKSY--SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKF 446 (505)
Q Consensus 385 ~~~~~-~~~~~~--------~~~-g~~------~~~~~~~~~~~~--sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~ 446 (505)
..... .....+ ..+ .+| ........+... .....+.++++| +|++||++|..+|+..+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 153 PNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTP-ILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred CCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCC-EEEEecCCCCcCChHHHHHH
Confidence 00000 000000 000 011 000000001101 112346678898 99999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEecCCCCCCCCCChHH-HHHHHHHHHHHHHHhh
Q 010654 447 VAKLREMKTDDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRAL 494 (505)
Q Consensus 447 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~l 494 (505)
++.+.. .+++.+++ ++||....+... +.+.+..+.+||.++.
T Consensus 232 ~~~~~~---~~~~~~~~---~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 232 MQHANC---NREIKIYE---GAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHHccC---CceEEEeC---CCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 887643 45778888 889977654433 3334567899998863
No 24
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=2.4e-18 Score=156.82 Aligned_cols=216 Identities=18% Similarity=0.203 Sum_probs=161.8
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh----
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ---- 309 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~---- 309 (505)
+.+.+++.| ..+.+++.+|++. ++.|.||.+|+-++... ......+.|+..||+|+.||.-+..+-...
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 345677777 7899999999875 44499999999776433 345566899999999999998553222111
Q ss_pred --HHHcc--cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC
Q 010654 310 --WYENG--KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 385 (505)
Q Consensus 310 --~~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 385 (505)
....+ ..........|+.++++||..++.+|++||+++|+|+||.+++.++.+.| .++++++..|..-.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------ 148 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------ 148 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC------
Confidence 11111 01111467899999999999999899999999999999999999999765 78999998873210
Q ss_pred CCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEec
Q 010654 386 PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 465 (505)
Q Consensus 386 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~ 465 (505)
. . .....++++| +|+.+|+.|+.+|.....++.+++..+++.+++.+|+
T Consensus 149 -~------------~---------------~~~~~~~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~-- 197 (236)
T COG0412 149 -D------------D---------------TADAPKIKVP-VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP-- 197 (236)
T ss_pred -C------------c---------------ccccccccCc-EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC--
Confidence 0 0 0014566787 9999999999999999999999999999899999998
Q ss_pred CCCCCCCCCC---------hHHHHHHHHHHHHHHHHhhC
Q 010654 466 LGAGHFSKSG---------RFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 466 ~~~gH~~~~~---------~~~~~~~~~~~~~fl~~~l~ 495 (505)
+..|++... .......+.++++||.++++
T Consensus 198 -ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 198 -GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred -CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 778876422 12234456678999999875
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=99.80 E-value=5e-18 Score=164.89 Aligned_cols=247 Identities=17% Similarity=0.184 Sum_probs=151.4
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.+...+...||.++.+....|+ .+.|+||++||..... ..|......|+++||.|+.+|+||+|.+......
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 101 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDD 101 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC------CCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCC
Confidence 4556677789988877644332 2347899999975432 1244445578899999999999999977542210
Q ss_pred c--ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh---------
Q 010654 313 N--GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------- 381 (505)
Q Consensus 313 ~--~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--------- 381 (505)
. +........++|+.+.++.+... .+..++.++|||+||.+++.++.++|++++++|+.+|......
T Consensus 102 ~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 179 (330)
T PRK10749 102 PHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR 179 (330)
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH
Confidence 0 00011123445666666665443 2347899999999999999999999999999999988643110
Q ss_pred ---hcc--C---CCCCCCccccccc---CC--CCCHHHH----HHHHhC---------------------ChhhcccCCC
Q 010654 382 ---TML--D---PTIPLTTAEWEEW---GD--PWKEEFY----FYMKSY---------------------SPVDNVKAQN 423 (505)
Q Consensus 382 ---~~~--~---~~~~~~~~~~~~~---g~--~~~~~~~----~~~~~~---------------------sp~~~~~~~~ 423 (505)
... . .........|... .+ ...++.+ +.+... .....+.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 259 (330)
T PRK10749 180 ILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDIT 259 (330)
T ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCC
Confidence 000 0 0000000000000 00 0011100 000000 1123456778
Q ss_pred CCeEEEEccCCCCCCCCChHHHHHHHHHhcCC---CCCeEEEEecCCCCCCCCCChH-HHHHHHHHHHHHHHHh
Q 010654 424 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKT---DDNILLFKCELGAGHFSKSGRF-ERLREAAFTYTFLMRA 493 (505)
Q Consensus 424 ~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~---~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 493 (505)
.| +|++||++|..|++..+.++++.+++++. ..++++|+ ++||....+.. .+...+..+.+||+++
T Consensus 260 ~P-~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~---gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 260 TP-LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIK---GAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CC-EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeC---CCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 87 99999999999999999999999987763 34788998 89997643332 2333455688898764
No 26
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.80 E-value=4.3e-18 Score=152.99 Aligned_cols=248 Identities=14% Similarity=0.113 Sum_probs=166.2
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.....+..++|..+......|... .++.-+|+++||... .....|......|+..||.|+..|++|+|.+...-
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~-~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~-- 100 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGE-HSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH-- 100 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcc-cchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc--
Confidence 344456778998887665556442 256678888998643 33455666778899999999999999999764311
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccC-------
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD------- 385 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~------- 385 (505)
.+...-...++|+.+.++.++.+...-....+++|+||||.+++.++.++|+.+.++|..+|+.-....+..
T Consensus 101 -~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 101 -AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISI 179 (313)
T ss_pred -ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHH
Confidence 122333356788888888877765444467899999999999999999999999999999997643322110
Q ss_pred -----CCCCCCcc-ccccc----------------------CCCCCHHHHHHHHhC-ChhhcccCCCCCeEEEEccCCCC
Q 010654 386 -----PTIPLTTA-EWEEW----------------------GDPWKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 386 -----~~~~~~~~-~~~~~----------------------g~~~~~~~~~~~~~~-sp~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
.-+|-... .-... |.|.-...++.++.- .-..++.+++.| +||+||+.|.
T Consensus 180 l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP-flilHG~dD~ 258 (313)
T KOG1455|consen 180 LTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP-FLILHGTDDK 258 (313)
T ss_pred HHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc-EEEEecCCCc
Confidence 00110000 00000 112222222222211 112567788898 9999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHHh
Q 010654 437 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 493 (505)
++.+.-+++|++....+.+ ++.+|| |.-|.... ...+...-+.++.+||.++
T Consensus 259 VTDp~~Sk~Lye~A~S~DK--TlKlYp---Gm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 259 VTDPKVSKELYEKASSSDK--TLKLYP---GMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccCcHHHHHHHHhccCCCC--ceeccc---cHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999887765 577899 88997643 3333444466799999875
No 27
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=3.3e-18 Score=150.74 Aligned_cols=219 Identities=22% Similarity=0.249 Sum_probs=157.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~ 310 (505)
.++.+..++..|..+-+..+.|+.. ..+++++.||-.... .........|.. ..+.|+..||+|.|.++.+.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~-----~~~~lly~hGNa~Dl--gq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p 106 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEA-----AHPTLLYSHGNAADL--GQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP 106 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccc-----cceEEEEcCCcccch--HHHHHHHHHHhhcccceEEEEecccccccCCCc
Confidence 4455566777777787765655542 469999999972211 111112233444 38999999999999876543
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
.+ .+.++|+.++.+||.++.. .+++|+++|+|+|...+..+|.+.| .+|+|..+|+++.++.+.....
T Consensus 107 sE-------~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~-- 174 (258)
T KOG1552|consen 107 SE-------RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTK-- 174 (258)
T ss_pred cc-------ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcc--
Confidence 32 2778999999999999865 6799999999999999999999887 8999999999998877643211
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.. .| ...++-+..++.+++| +|++||++|++||+.++.+++++.+.. ++.++.. |+||
T Consensus 175 ~~-~~--------------~d~f~~i~kI~~i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~---g~gH 232 (258)
T KOG1552|consen 175 TT-YC--------------FDAFPNIEKISKITCP-VLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVK---GAGH 232 (258)
T ss_pred eE-Ee--------------eccccccCcceeccCC-EEEEecccCceecccccHHHHHhcccc---CCCcEEe---cCCC
Confidence 00 11 0112236677888998 999999999999999999999998764 5667777 8899
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhh
Q 010654 471 FSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
....-.++.++. +..|+...+
T Consensus 233 ~~~~~~~~yi~~---l~~f~~~~~ 253 (258)
T KOG1552|consen 233 NDIELYPEYIEH---LRRFISSVL 253 (258)
T ss_pred cccccCHHHHHH---HHHHHHHhc
Confidence 765444454444 445554433
No 28
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.77 E-value=3.2e-18 Score=146.04 Aligned_cols=209 Identities=20% Similarity=0.201 Sum_probs=144.7
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
-.|+++||..|+..+ ......+|.++||.|.+|+|+|+|-...+|...+...| ++|+.++.++|.+.++ +.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~e 86 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---DE 86 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---Ce
Confidence 899999998776443 34455789999999999999999998888876665555 6899999999999987 68
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh--ccCCCCCCCcccccccCCCCCHHHHHHHHhCC--h----
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT--MLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYS--P---- 415 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~s--p---- 415 (505)
|+|.|.||||.+++.++.++| .+++|..++..+..+. ...... .....+..+-....++..+.++++. |
T Consensus 87 I~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l-~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~ 163 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLL-EYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTT 163 (243)
T ss_pred EEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHH-HHHHHhhhccCCCHHHHHHHHHHhhcchHHHH
Confidence 999999999999999999988 5666655554332111 000000 0000111121122222222333333 2
Q ss_pred ----------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHH
Q 010654 416 ----------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAF 485 (505)
Q Consensus 416 ----------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 485 (505)
...+..|..| +|+++|.+|+.||.+.+..+++.+... +.++.+|+ +.||-+..+. ++-...+.
T Consensus 164 ~~~~~~i~~~~~~~~~I~~p-t~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e---~SgHVIt~D~-Erd~v~e~ 236 (243)
T COG1647 164 AQLKKLIKDARRSLDKIYSP-TLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLE---GSGHVITLDK-ERDQVEED 236 (243)
T ss_pred HHHHHHHHHHHhhhhhcccc-hhheecccCCCCCHHHHHHHHHhccCC--cceeEEEc---cCCceeecch-hHHHHHHH
Confidence 2456778887 999999999999999999999998765 45688998 7899765442 22222345
Q ss_pred HHHHHH
Q 010654 486 TYTFLM 491 (505)
Q Consensus 486 ~~~fl~ 491 (505)
++.||+
T Consensus 237 V~~FL~ 242 (243)
T COG1647 237 VITFLE 242 (243)
T ss_pred HHHHhh
Confidence 788885
No 29
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.76 E-value=2.8e-17 Score=170.07 Aligned_cols=241 Identities=16% Similarity=0.156 Sum_probs=157.7
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC-CCCC-chhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAF-NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~-~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
++.||.+|.+.++.|++. ++.|+||++||...... ...+ ......|+++||+|+.+|+||.|.++..+..
T Consensus 2 ~~~DG~~L~~~~~~P~~~----~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~---- 73 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG----GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL---- 73 (550)
T ss_pred cCCCCCEEEEEEEecCCC----CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe----
Confidence 568999999999998753 57899999997543321 0111 1234688999999999999999988665421
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC-CCCCCc-cc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP-TIPLTT-AE 394 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~-~~~~~~-~~ 394 (505)
......+|+.++++|+.++++.+ .||+++|+||||++++.++..+|+.++|++..++..|+....... .+.... ..
T Consensus 74 -~~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~~~~~g~~~~~~~~~ 151 (550)
T TIGR00976 74 -LGSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRDIAFPGALRLDVLLG 151 (550)
T ss_pred -cCcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHhhccCCeeccchhHH
Confidence 11467899999999999998876 699999999999999999998899999999999988866432111 111000 00
Q ss_pred cc-c----cCCC--CC---------------------------------------------HHHHHHHHhCChhhcccCC
Q 010654 395 WE-E----WGDP--WK---------------------------------------------EEFYFYMKSYSPVDNVKAQ 422 (505)
Q Consensus 395 ~~-~----~g~~--~~---------------------------------------------~~~~~~~~~~sp~~~~~~~ 422 (505)
|. . ...+ .. ...++++...+....+.++
T Consensus 152 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i 231 (550)
T TIGR00976 152 WWALLATDSMRPRADDRPPRYAAAARLAQSYDDCQTALSHTPRSSVLALDRFIGWWIQVVDDDYDESWVSISLWRDLGGS 231 (550)
T ss_pred HHHhhccccccccccccccchHHHHHHhhhhhhHHHHHhcCCccccccccccchhhhhccCCCCChhhccCchhhHhcCC
Confidence 10 0 0000 00 0001111222333456678
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC--------CChH-HHHHHHHHHHHHHHHh
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK--------SGRF-ERLREAAFTYTFLMRA 493 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~--------~~~~-~~~~~~~~~~~fl~~~ 493 (505)
++| +|++.|-.|. ...++.+.++++.+.+ +.++++=| .+|... .+.. .........++||+++
T Consensus 232 ~vP-~l~~~gw~D~--~~~g~~~~~~~~~~~~-~~~lilGp----w~H~~~~~~~~~~~~g~~~~~~~~~~~~~~wfD~~ 303 (550)
T TIGR00976 232 DVP-TLVTGGWYDN--HSRGSIRLFLAVHRGG-AQRLVVGP----WTHSGLGGRVGDGNYGMAALSWVDEAEQLAFFDRH 303 (550)
T ss_pred CCC-EEEeCcccCC--CCchHHHHHHHHhhcC-CceEEEcc----CCCCCcccccCCCccCccccccchhhhhHHHHHHH
Confidence 998 9999999994 5567888888887764 55666545 245311 0000 0011112458999999
Q ss_pred hCCC
Q 010654 494 LSML 497 (505)
Q Consensus 494 l~~~ 497 (505)
|+..
T Consensus 304 Lkg~ 307 (550)
T TIGR00976 304 LKGG 307 (550)
T ss_pred hCCC
Confidence 9754
No 30
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.76 E-value=1.3e-17 Score=160.94 Aligned_cols=229 Identities=21% Similarity=0.235 Sum_probs=154.9
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hh-HHHHHHCCcEEEEEcccCCCCCchhHHHccccc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SS-RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~-~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
..++..+++.++.| .. ....+.|+||++|||.......... .. ...+...|+.|+.+|||-..+.
T Consensus 58 ~~~~~~~~~~~y~p-~~-~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 58 GPSGDGVPVRVYRP-DR-KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred CCCCCceeEEEECC-CC-CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 34555677888888 22 3346789999999997655443333 23 3455668999999999977653
Q ss_pred CCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhhhhccCCCCC-
Q 010654 318 KKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTMLDPTIP- 389 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~~~~~~~- 389 (505)
.....++|+.+++.|+.++. .+|+++|+|+|+|+||.+++.++....+ ..++.+..+|.+|... . .....
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~~ 202 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLPG 202 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchhh
Confidence 34477899999999999874 4899999999999999999988866433 5688889999888653 1 11110
Q ss_pred ------CCccc---c--ccc-CCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCC
Q 010654 390 ------LTTAE---W--EEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 390 ------~~~~~---~--~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~ 457 (505)
+.... + ..+ +...+... ...+|+....-...||++|++|+.|...+ +++.++++|+++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~ 276 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDRED----PEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPV 276 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCC----CccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeE
Confidence 00000 0 000 11101000 12355544331137889999999999997 9999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCh-HHHHHHHHHHHHHHHH
Q 010654 458 NILLFKCELGAGHFSKSGR-FERLREAAFTYTFLMR 492 (505)
Q Consensus 458 ~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~ 492 (505)
++..|+ +..|++.... ......+..+..|+.+
T Consensus 277 ~~~~~~---g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 277 ELRVYP---GMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred EEEEeC---CcceeccccCcHHHHHHHHHHHHHHHH
Confidence 999998 7889762211 3333444556667663
No 31
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.75 E-value=2e-16 Score=155.63 Aligned_cols=245 Identities=15% Similarity=0.076 Sum_probs=153.9
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
......+..++|..+.+..+.|... .+.|+||++||..+... .|......|+++||.|+.+|+||+|.......
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~~--~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~ 182 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHSG--RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG 182 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHHH--HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC
Confidence 4455667788888888887777533 34689999999765422 24555678889999999999999987643211
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCchhhhhh------
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTT------ 382 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d~~~~------ 382 (505)
.........+|+.++++++.... +..++.|+|||+||.+++.++. +|+ .++++|..+|..++...
T Consensus 183 ---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~ 256 (395)
T PLN02652 183 ---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGA 256 (395)
T ss_pred ---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHH
Confidence 11122234678888888887542 2247999999999999987765 564 78899998887543210
Q ss_pred ---ccC---CCCCCCccc-------------ccccCCCC-----C--HHHHHHHHhCC-hhhcccCCCCCeEEEEccCCC
Q 010654 383 ---MLD---PTIPLTTAE-------------WEEWGDPW-----K--EEFYFYMKSYS-PVDNVKAQNYPHILVTAGLND 435 (505)
Q Consensus 383 ---~~~---~~~~~~~~~-------------~~~~g~~~-----~--~~~~~~~~~~s-p~~~~~~~~~Pp~Li~~G~~D 435 (505)
+.. +...+.... ...+.+|. . ...+..+.... ....+.++++| +|++||++|
T Consensus 257 ~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vP-vLIi~G~~D 335 (395)
T PLN02652 257 VAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVP-FMVLHGTAD 335 (395)
T ss_pred HHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCC-EEEEEeCCC
Confidence 000 000000000 00011110 0 00000011000 12345677898 999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhC
Q 010654 436 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 436 ~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
..+|+.++.++++.+... ..++.+|+ +++|....+ ....+....+.+||.++++
T Consensus 336 ~vvp~~~a~~l~~~~~~~--~k~l~~~~---ga~H~l~~e-~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 336 RVTDPLASQDLYNEAASR--HKDIKLYD---GFLHDLLFE-PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCCHHHHHHHHHhcCCC--CceEEEEC---CCeEEeccC-CCHHHHHHHHHHHHHHHhh
Confidence 999999999999987553 34677887 889975332 1222334568999999885
No 32
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.74 E-value=1.2e-17 Score=157.46 Aligned_cols=212 Identities=20% Similarity=0.279 Sum_probs=140.4
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC-C--C-CCCc----hhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC-N--D-PAFN----SSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~-~--~-~~~~----~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
||.+|.+.+++| +. ...++.|+||..|+-.... . . .... .....|+++||+|+.+|.||.++++..|...
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 899999999999 43 4568999999987643211 0 0 0000 0112399999999999999999988877521
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-hccCCCC-CCC
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-TMLDPTI-PLT 391 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-~~~~~~~-~~~ 391 (505)
...+.+|..++|+|+.++++.| .|||++|.||+|+..+.+|...|..++|++..++..|+.. ....... ...
T Consensus 79 -----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~ 152 (272)
T PF02129_consen 79 -----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLG 152 (272)
T ss_dssp -----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCC
T ss_pred -----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccccc
Confidence 6678999999999999998876 6999999999999999999978889999999999888655 1111000 000
Q ss_pred c-cccc----------ccCCCCC---------------------------------HHHHHHHHhCChhhcccCCCCCeE
Q 010654 392 T-AEWE----------EWGDPWK---------------------------------EEFYFYMKSYSPVDNVKAQNYPHI 427 (505)
Q Consensus 392 ~-~~~~----------~~g~~~~---------------------------------~~~~~~~~~~sp~~~~~~~~~Pp~ 427 (505)
. ..|. ....+.. +..-.++.+.++..++.++++| +
T Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP-~ 231 (272)
T PF02129_consen 153 FFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVP-V 231 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SE-E
T ss_pred chhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCC-E
Confidence 0 0110 0000000 0001223445555667888997 9
Q ss_pred EEEccCCCCCCCCChHHHHHHHHHhcC-CCCCeEEEE
Q 010654 428 LVTAGLNDPRVMYSEPAKFVAKLREMK-TDDNILLFK 463 (505)
Q Consensus 428 Li~~G~~D~~vp~~~~~~~~~~L~~~~-~~~~~~~~~ 463 (505)
|+++|-.|.... .++.+.+++|++.+ ++.++++-|
T Consensus 232 l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigp 267 (272)
T PF02129_consen 232 LIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGP 267 (272)
T ss_dssp EEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEES
T ss_pred EEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeC
Confidence 999999997777 89999999999998 677777776
No 33
>PRK11460 putative hydrolase; Provisional
Probab=99.73 E-value=1.4e-16 Score=146.00 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=126.0
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCC----CCchhHHHcccccCCc-------chHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG----ELGRQWYENGKFLKKK-------NTFTDFIAC 329 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~----~~g~~~~~~~~~~~~~-------~~~~D~~~~ 329 (505)
.+.|+||++||..++.. .|......|...++.+..+.++|.. +.|..|.... ..... .....+.+.
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHHHH
Confidence 45799999999766533 2455567787777655555666542 2244454211 11111 223344556
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHH
Q 010654 330 AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFY 409 (505)
Q Consensus 330 ~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 409 (505)
++++.++..++++||+++|+|+||.+++.++.++|++++++++.+|... .. +.
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------~~------------~~------- 143 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------SL------------PE------- 143 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------cc------------cc-------
Confidence 6777777678889999999999999999999888988888777655211 00 00
Q ss_pred HHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 010654 410 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTF 489 (505)
Q Consensus 410 ~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 489 (505)
.+ ..+.| +|++||++|+.||++.+++++++|++.+.++++..|+ +.||.+... ....+.+|
T Consensus 144 ----~~-----~~~~p-vli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~---~~gH~i~~~------~~~~~~~~ 204 (232)
T PRK11460 144 ----TA-----PTATT-IHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVE---DLGHAIDPR------LMQFALDR 204 (232)
T ss_pred ----cc-----cCCCc-EEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC---CCCCCCCHH------HHHHHHHH
Confidence 00 12455 9999999999999999999999999999999999998 889987522 22234556
Q ss_pred HHHhh
Q 010654 490 LMRAL 494 (505)
Q Consensus 490 l~~~l 494 (505)
|.+.|
T Consensus 205 l~~~l 209 (232)
T PRK11460 205 LRYTV 209 (232)
T ss_pred HHHHc
Confidence 65554
No 34
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.70 E-value=1.1e-15 Score=144.45 Aligned_cols=240 Identities=17% Similarity=0.168 Sum_probs=156.1
Q ss_pred EEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC---CCCCchhHHHHHH-CCcEEEEEcccCCCCCch
Q 010654 233 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN---DPAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 233 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~---~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~ 308 (505)
...+.+... ..++..+|.|... ....+.|+|||+|||..... ...|+.....+++ .+.+|+.+|||-..+
T Consensus 63 ~~dv~~~~~--~~l~vRly~P~~~-~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE--- 136 (336)
T KOG1515|consen 63 SKDVTIDPF--TNLPVRLYRPTSS-SSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE--- 136 (336)
T ss_pred eeeeEecCC--CCeEEEEEcCCCC-CcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC---
Confidence 344444433 4577888888875 44478999999999975433 3445555556644 699999999997654
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHc----CCCCCCcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKN----CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVD 378 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d 378 (505)
...+..++|..+|+.|+.++ ..+|++||+|+|.|+||.++..++.+. +-.+++.|...|++.
T Consensus 137 --------h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 137 --------HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred --------CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 44557889999999999886 458999999999999999988877542 246899999999876
Q ss_pred hhhhccCC------CCC-CCc----ccccccCCCCCHHHHHHHHhCChhh-----cccCCCCCeEEEEccCCCCCCCCCh
Q 010654 379 VLTTMLDP------TIP-LTT----AEWEEWGDPWKEEFYFYMKSYSPVD-----NVKAQNYPHILVTAGLNDPRVMYSE 442 (505)
Q Consensus 379 ~~~~~~~~------~~~-~~~----~~~~~~g~~~~~~~~~~~~~~sp~~-----~~~~~~~Pp~Li~~G~~D~~vp~~~ 442 (505)
.......+ ..+ ... ..|. .-.|+.....+ --..+|.. ......+|++|++.++.|... .+
T Consensus 209 ~~~~~~~e~~~~~~~~~~~~~~~~~~~w~-~~lP~~~~~~~-~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~ 284 (336)
T KOG1515|consen 209 GTDRTESEKQQNLNGSPELARPKIDKWWR-LLLPNGKTDLD-HPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DE 284 (336)
T ss_pred CCCCCCHHHHHhhcCCcchhHHHHHHHHH-HhCCCCCCCcC-CccccccccccccCccccCCCceEEEEeCchhhh--hh
Confidence 54322110 000 000 0011 01111000000 00112332 122336788999999999777 89
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHh
Q 010654 443 PAKFVAKLREMKTDDNILLFKCELGAGHFSK---SGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 443 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~~fl~~~ 493 (505)
+..++++|++.|++++++.++ ++.|++. .........+..+.+|+.+.
T Consensus 285 ~~~Y~~~Lkk~Gv~v~~~~~e---~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 285 GLAYAEKLKKAGVEVTLIHYE---DGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hHHHHHHHHHcCCeEEEEEEC---CCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999999999977777 7788642 22233344444567777653
No 35
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.70 E-value=7.8e-17 Score=146.43 Aligned_cols=187 Identities=20% Similarity=0.247 Sum_probs=123.4
Q ss_pred EEEEcCCCCcCCCCCCc-hhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---CCCC
Q 010654 266 LLYGYGSYEICNDPAFN-SSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCT 340 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~-~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 340 (505)
||++|||.......... .....+++ +|++|+.+|||-+.+ ......++|+.++++|+.++ ..+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-----------~~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-----------APFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-----------SSTTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-----------ccccccccccccceeeecccccccccc
Confidence 78999997664443333 33456665 899999999996543 33457899999999999987 3478
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCC----ceeEEEecCCchhhhhhc---c-----CCCCCCC-cccc----cccCCCCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTM---L-----DPTIPLT-TAEW----EEWGDPWK 403 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~----~~~a~v~~~~~~d~~~~~---~-----~~~~~~~-~~~~----~~~g~~~~ 403 (505)
++||+|+|.|+||.+++.++.+..+ .++++++.+|.+|+.... . ....++. .... ..+-...+
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSD 149 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGG
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999998865333 489999999988761110 0 0010110 0000 00100000
Q ss_pred HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 404 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
.+ -...||+........||++|++|+.|..+ .++.+|+++|++.|+++++++++ +.+|.+
T Consensus 150 ~~----~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~---g~~H~f 209 (211)
T PF07859_consen 150 RD----DPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYP---GMPHGF 209 (211)
T ss_dssp TT----STTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEET---TEETTG
T ss_pred cc----ccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEEC---CCeEEe
Confidence 00 01346665522225889999999999876 68999999999999999999998 778864
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.70 E-value=1.3e-15 Score=144.23 Aligned_cols=244 Identities=19% Similarity=0.176 Sum_probs=150.2
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
.+-.+.+.||..+......++.. +..+||++||...... .|......|..+||.|+..|.||+|.+.+ ...
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~~--ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~r 80 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHSG--RYEELADDLAARGFDVYALDLRGHGRSPR--GQR 80 (298)
T ss_pred ccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCc
Confidence 34456778999887765544432 2389999999764322 24455678999999999999999998853 111
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--hc--------
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TM-------- 383 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~~-------- 383 (505)
+.......-+.|+...++.+... . -..++.++||||||.+++.++.+++..++++|..+|++.... ..
T Consensus 81 g~~~~f~~~~~dl~~~~~~~~~~-~-~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~ 158 (298)
T COG2267 81 GHVDSFADYVDDLDAFVETIAEP-D-PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLAL 158 (298)
T ss_pred CCchhHHHHHHHHHHHHHHHhcc-C-CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhc
Confidence 11111223344444444444432 1 136899999999999999999999999999999999887652 00
Q ss_pred --cC---CCCCCCcc-c-ccccCCC-CCHHHHHHHHhCCh-----------------------hhcccCCCCCeEEEEcc
Q 010654 384 --LD---PTIPLTTA-E-WEEWGDP-WKEEFYFYMKSYSP-----------------------VDNVKAQNYPHILVTAG 432 (505)
Q Consensus 384 --~~---~~~~~~~~-~-~~~~g~~-~~~~~~~~~~~~sp-----------------------~~~~~~~~~Pp~Li~~G 432 (505)
.. ...+.... . ....... .+++..+.+ ..+| .....+++.| +||+||
T Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~-~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P-vLll~g 236 (298)
T COG2267 159 KLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAY-EADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP-VLLLQG 236 (298)
T ss_pred ccccccccccccCcccccCcCcchhhcCHHHHHHH-hcCCccccCCccHHHHHHHHHhhcccchhccccccCC-EEEEec
Confidence 00 01111110 0 0000000 122211111 1222 1224556887 999999
Q ss_pred CCCCCCC-CChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh-HHHHHHHHHHHHHHHHhhC
Q 010654 433 LNDPRVM-YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR-FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 433 ~~D~~vp-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l~ 495 (505)
+.|.+|+ ...+.++++++.... .+++.|+ |+.|....+. ..+...+..+.+|+.+++.
T Consensus 237 ~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~~---g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 237 GDDRVVDNVEGLARFFERAGSPD--KELKVIP---GAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CCCccccCcHHHHHHHHhcCCCC--ceEEecC---CcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999999 566666666655443 5788898 8899654322 2124446668999988764
No 37
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.70 E-value=1.5e-16 Score=151.98 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=139.9
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.+..+++.++-.+ ..|++++..|+. +++.|+||++ ||..+-....+......++.+|++++.+|.+|.|....
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~----~~p~P~VIv~-gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~- 234 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSG----EKPYPTVIVC-GGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK- 234 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSS----SS-EEEEEEE---TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCC----CCCCCEEEEe-CCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-
Confidence 5678888888755 789999888874 3778988887 44333222222222246788999999999999886421
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch-hhhhh-ccCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-DVLTT-MLDPT 387 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-d~~~~-~~~~~ 387 (505)
|- ..+..-.-..++++||.+.+++|.+||+++|.|+||+.+..++..++++++|+|+..|++ ++... .....
T Consensus 235 ~~------l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 235 WP------LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp T-------S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTT
T ss_pred CC------CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhc
Confidence 11 111111234578999999999999999999999999999999877788999999887753 33221 00012
Q ss_pred CCCCcc-cc-cccCCC--CCHHHHHHHHhCChhh--cc--cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 388 IPLTTA-EW-EEWGDP--WKEEFYFYMKSYSPVD--NV--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 388 ~~~~~~-~~-~~~g~~--~~~~~~~~~~~~sp~~--~~--~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
.|..-. .+ ..+|.. ++......+..+|-.. -+ .+.++| +|.+.|++|+++|.+++.-++. .+.+-+.
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~p-lL~i~~~~D~v~P~eD~~lia~----~s~~gk~ 383 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTP-LLAINGEDDPVSPIEDSRLIAE----SSTDGKA 383 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS--EEEEEETT-SSS-HHHHHHHHH----TBTT-EE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcc-eEEeecCCCCCCCHHHHHHHHh----cCCCCce
Confidence 221100 01 224543 3334444556666643 23 555787 9999999999999988765543 3444456
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
..++. +.=|. +.. ..+..+..||++.|
T Consensus 384 ~~~~~--~~~~~---gy~---~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 384 LRIPS--KPLHM---GYP---QALDEIYKWLEDKL 410 (411)
T ss_dssp EEE-S--SSHHH---HHH---HHHHHHHHHHHHHH
T ss_pred eecCC--Ccccc---chH---HHHHHHHHHHHHhc
Confidence 67762 11131 112 33445899998865
No 38
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.69 E-value=8.7e-16 Score=136.84 Aligned_cols=194 Identities=18% Similarity=0.195 Sum_probs=123.1
Q ss_pred eEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhH--HHcccccCCcchH
Q 010654 247 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQW--YENGKFLKKKNTF 323 (505)
Q Consensus 247 ~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~--~~~~~~~~~~~~~ 323 (505)
...|+.|++. +.++.|+||.+||+.+......-...+..+++ +||+|+.|+-........-| .. .....+..+.
T Consensus 2 ~Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGA--PRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCC--CCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccch
Confidence 4567888865 33578999999998664322111112346777 59999999854322222223 22 2223344566
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCC
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWK 403 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~ 403 (505)
..+.+.++++.++..+|++||.+.|.|.||.|+..++..+||+|+|+...+|+.--... + .. .......-|....
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~--~-~~--~a~~~m~~g~~~~ 153 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAA--S-GA--SALSAMRSGPRPA 153 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccccc--C-cc--cHHHHhhCCCCCC
Confidence 77888899999999999999999999999999999999999999999988775321100 0 00 0000000121122
Q ss_pred HHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 404 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 404 ~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
+.........+. ... ..| ++|+||+.|..|.+.++.++.+.+...
T Consensus 154 p~~~~~a~~~~g--~~~--~~P-~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 154 PAAAWGARSDAG--AYP--GYP-RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred hHHHHHhhhhcc--CCC--CCC-EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 221111111111 111 245 899999999999999999998888764
No 39
>PRK10985 putative hydrolase; Provisional
Probab=99.68 E-value=3.3e-15 Score=144.71 Aligned_cols=244 Identities=16% Similarity=0.136 Sum_probs=142.7
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
++..+...||..+.......+. ...+.|+||++||..+.............|.++||.|+.+|+||.|+.......
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 3344577899776544221111 124579999999987654332223345678899999999999998765322111
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc--eeEEEecCCchhhhhh---------
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLTT--------- 382 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~~~d~~~~--------- 382 (505)
.......+|+..+++++.++.. ..++.++|+|+||.+++.+++++++. ++++|+.++..++...
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~ 182 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS 182 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH
Confidence 1112357899999999987632 35799999999999888777766543 6776666665432100
Q ss_pred -cc-------------------CCCCCCC---------cccccc-cCCC--CCHHHHHHHHhCChhhcccCCCCCeEEEE
Q 010654 383 -ML-------------------DPTIPLT---------TAEWEE-WGDP--WKEEFYFYMKSYSPVDNVKAQNYPHILVT 430 (505)
Q Consensus 383 -~~-------------------~~~~~~~---------~~~~~~-~g~~--~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~ 430 (505)
.+ ....+.. ..++.+ +..+ ......+++...++...+.++++| +|++
T Consensus 183 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P-~lii 261 (324)
T PRK10985 183 RVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKP-TLII 261 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCC-EEEE
Confidence 00 0000000 000000 0011 011122334456666777888998 9999
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC-C---hHHHHHHHHHHHHHHHHhhC
Q 010654 431 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS-G---RFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 431 ~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~---~~~~~~~~~~~~~fl~~~l~ 495 (505)
+|++|+.+++.....+.+ ....+++++.+ ++||.... + ....+- -..+.+||...++
T Consensus 262 ~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~---~~GH~~~~~g~~~~~~~w~-~~~~~~~~~~~~~ 322 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPES----LPPNVEYQLTE---HGGHVGFVGGTLLKPQMWL-EQRIPDWLTTYLE 322 (324)
T ss_pred ecCCCCCCChhhChHHHH----hCCCeEEEECC---CCCceeeCCCCCCCCCccH-HHHHHHHHHHhhc
Confidence 999999998866655432 22345556666 78995321 1 122221 1247888876653
No 40
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.67 E-value=7e-16 Score=130.67 Aligned_cols=235 Identities=17% Similarity=0.152 Sum_probs=163.5
Q ss_pred CceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 230 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 230 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
.++-|+++..++|..+++++++.-. ...|++++.|+..+... .........+.+.+..|++++|||.|.+...
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 5677899999999999999987622 36899999998655422 1111223466778999999999988765333
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCC
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 389 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 389 (505)
-.+ . .-.-|..++++||..++..|..++.++|.|.||..+..+++...+++.|++....++.....+..--.|
T Consensus 124 psE-----~--GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p 196 (300)
T KOG4391|consen 124 PSE-----E--GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP 196 (300)
T ss_pred ccc-----c--ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc
Confidence 222 1 234688899999999999999999999999999999999999899999999998887654332211111
Q ss_pred CCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 010654 390 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 469 (505)
Q Consensus 390 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 469 (505)
+.......+ .++ ..++....+.+.+.| .|++.|..|..|||-+.+++++.-..+.+ ++..|| ++.
T Consensus 197 ~~~k~i~~l-------c~k--n~~~S~~ki~~~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K--rl~eFP---~gt 261 (300)
T KOG4391|consen 197 FPMKYIPLL-------CYK--NKWLSYRKIGQCRMP-FLFISGLKDELVPPVMMRQLYELCPSRTK--RLAEFP---DGT 261 (300)
T ss_pred chhhHHHHH-------HHH--hhhcchhhhccccCc-eEEeecCccccCCcHHHHHHHHhCchhhh--hheeCC---CCc
Confidence 111100000 011 012334445566787 99999999999999999999998877654 467888 778
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhCC
Q 010654 470 HFSKSGRFERLREAAFTYTFLMRALSM 496 (505)
Q Consensus 470 H~~~~~~~~~~~~~~~~~~fl~~~l~~ 496 (505)
|.-..-....++ .+.+||.+....
T Consensus 262 HNDT~i~dGYfq---~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 262 HNDTWICDGYFQ---AIEDFLAEVVKS 285 (300)
T ss_pred cCceEEeccHHH---HHHHHHHHhccC
Confidence 853221112222 367788886553
No 41
>PLN02511 hydrolase
Probab=99.67 E-value=3.4e-15 Score=147.62 Aligned_cols=247 Identities=15% Similarity=0.159 Sum_probs=146.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
..++..+...||..+....+.+... ......|+||++||..++.....+......+.++||.|+++|+||.|+....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~-- 146 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT-- 146 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC--
Confidence 3455567788998887553332211 1223468999999987654432122234556789999999999999875321
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc--eeEEEecCCchhhhh---hccC-
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLT---TMLD- 385 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~--~~a~v~~~~~~d~~~---~~~~- 385 (505)
..........+|+.++++++..+. ...++.++|+|+||.+++.++.++++. +.++++.++..++.. .+..
T Consensus 147 --~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~ 222 (388)
T PLN02511 147 --TPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG 222 (388)
T ss_pred --CcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc
Confidence 011112345789999999998762 235899999999999999999998876 666665544333210 0000
Q ss_pred ------C------------------CCC--C---------Ccccccc-cCCC----CCHHHHHHHHhCChhhcccCCCCC
Q 010654 386 ------P------------------TIP--L---------TTAEWEE-WGDP----WKEEFYFYMKSYSPVDNVKAQNYP 425 (505)
Q Consensus 386 ------~------------------~~~--~---------~~~~~~~-~g~~----~~~~~~~~~~~~sp~~~~~~~~~P 425 (505)
. ..+ . ...++.+ +..+ ...+ +++...|+...+.++++|
T Consensus 223 ~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~--~yy~~~s~~~~L~~I~vP 300 (388)
T PLN02511 223 FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVD--AYYSNSSSSDSIKHVRVP 300 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHH--HHHHHcCchhhhccCCCC
Confidence 0 000 0 0000000 0000 0111 123455677788899998
Q ss_pred eEEEEccCCCCCCCCChHH-HHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH----HHHHHHHHHHHHhhC
Q 010654 426 HILVTAGLNDPRVMYSEPA-KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL----REAAFTYTFLMRALS 495 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~----~~~~~~~~fl~~~l~ 495 (505)
+|+|+|++|+.+|+.... .+. +....+++++++ ++||....+.+... -....+.+||.....
T Consensus 301 -tLiI~g~dDpi~p~~~~~~~~~----~~~p~~~l~~~~---~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 301 -LLCIQAANDPIAPARGIPREDI----KANPNCLLIVTP---SGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred -eEEEEcCCCCcCCcccCcHhHH----hcCCCEEEEECC---CcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999986542 222 223345666776 88996543332210 012246788877653
No 42
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.65 E-value=2.7e-14 Score=137.36 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=134.9
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
....+.+...+|.++... +.... . ...|.||++||.+... ..|......|.++||.|+++|.||.|......
T Consensus 20 ~~~~~~~~~~~~~~~~i~--y~~~G-~--~~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~- 91 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMH--YVDEG-P--ADGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT- 91 (302)
T ss_pred CceeEeecCCCCceEEEE--EEecC-C--CCCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-
Confidence 344455555566654432 22221 1 2357899999986443 23666666787889999999999998653211
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh--------hhhc
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV--------LTTM 383 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~--------~~~~ 383 (505)
......+++..+.+..++++ .+.+++.++|||+||.+++.++..+|+++++++..++..-. ...+
T Consensus 92 -----~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 164 (302)
T PRK00870 92 -----RREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAW 164 (302)
T ss_pred -----CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhh
Confidence 01112345554444444443 23368999999999999999999999999999887653110 0000
Q ss_pred cC--CCCCCC-cc-------------cc-cccCCC-CCHHH---HHHHHh---CCh-----------hhcccCCCCCeEE
Q 010654 384 LD--PTIPLT-TA-------------EW-EEWGDP-WKEEF---YFYMKS---YSP-----------VDNVKAQNYPHIL 428 (505)
Q Consensus 384 ~~--~~~~~~-~~-------------~~-~~~g~~-~~~~~---~~~~~~---~sp-----------~~~~~~~~~Pp~L 428 (505)
.. ...+.. .. .. ..+..+ ..... ...+.. ..+ ...+.++++| +|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~l 243 (302)
T PRK00870 165 RAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKP-FL 243 (302)
T ss_pred hcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCc-eE
Confidence 00 000000 00 00 001101 00000 000000 000 1234677898 99
Q ss_pred EEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 429 VTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 429 i~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+++|+.|+.+|... .++.+.+.... ..+++.++ ++||......++.+. ..+.+|+.++
T Consensus 244 ii~G~~D~~~~~~~-~~~~~~~~~~~-~~~~~~i~---~~gH~~~~e~p~~~~--~~l~~fl~~~ 301 (302)
T PRK00870 244 TAFSDSDPITGGGD-AILQKRIPGAA-GQPHPTIK---GAGHFLQEDSGEELA--EAVLEFIRAT 301 (302)
T ss_pred EEecCCCCcccCch-HHHHhhccccc-ccceeeec---CCCccchhhChHHHH--HHHHHHHhcC
Confidence 99999999999865 77766665321 12356777 889987655554433 3577888653
No 43
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.65 E-value=2.3e-15 Score=143.32 Aligned_cols=209 Identities=14% Similarity=0.123 Sum_probs=123.8
Q ss_pred CcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.|.||++||.+.....+. +......+++.||.|+.+|+||.|.+...... ........+|+.+.++.+ +.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l------~~ 100 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL------DI 100 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc------CC
Confidence 477999999765432211 11223456778999999999999876432100 001112234544444443 44
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-----------hccCC-CCCCCccccc----c--cCCC--
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----------TMLDP-TIPLTTAEWE----E--WGDP-- 401 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-----------~~~~~-~~~~~~~~~~----~--~g~~-- 401 (505)
+++.++|||+||.+++.++.++|++++++|+.+|...... .+... ..+. ...+. . +...
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPS-YETLKQMLNVFLFDQSLI 179 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCC-HHHHHHHHhhCccCcccC
Confidence 7999999999999999999999999999998776421000 00000 0000 00000 0 0000
Q ss_pred -------------CCHHHH-HHHH--------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCe
Q 010654 402 -------------WKEEFY-FYMK--------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 459 (505)
Q Consensus 402 -------------~~~~~~-~~~~--------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 459 (505)
..+... ..+. ..+....+.++++| +|+++|++|..+|+..++++++.+. ++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlli~G~~D~~v~~~~~~~~~~~~~----~~~~ 254 (282)
T TIGR03343 180 TEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAK-TLVTWGRDDRFVPLDHGLKLLWNMP----DAQL 254 (282)
T ss_pred cHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCC-EEEEEccCCCcCCchhHHHHHHhCC----CCEE
Confidence 001110 0110 01112345678898 9999999999999988888877664 4677
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 460 LLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 460 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++++ ++||....+.++.+.. .+.+|+.
T Consensus 255 ~~i~---~agH~~~~e~p~~~~~--~i~~fl~ 281 (282)
T TIGR03343 255 HVFS---RCGHWAQWEHADAFNR--LVIDFLR 281 (282)
T ss_pred EEeC---CCCcCCcccCHHHHHH--HHHHHhh
Confidence 8888 8899876666654433 4677774
No 44
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.64 E-value=2.1e-15 Score=141.47 Aligned_cols=143 Identities=20% Similarity=0.176 Sum_probs=92.1
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCc------------CCCCCC----chhHHHHHHCC
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI------------CNDPAF----NSSRLSLLDRG 292 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~------------~~~~~~----~~~~~~l~~~G 292 (505)
..+..|++.|.+.++..++++++.|++. .++.|+||++||-.+. .....+ ......|+++|
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 4689999999999999999999999875 4789999999872211 000011 11346899999
Q ss_pred cEEEEEcccCCCCCchhHH-----------------HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHH
Q 010654 293 FIFAIAQIRGGGELGRQWY-----------------ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLL 355 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~~~-----------------~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~ 355 (505)
|+|+++|.+|-|+.+..-. ..+....+ ....|.+.+++||.+++.+|++|||++|+|+||+.
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G-~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAG-LMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHH-HHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHH-HHHHHHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 9999999998886543110 01111111 23355667999999999999999999999999999
Q ss_pred HHHHHhhCCCceeEEEecCCc
Q 010654 356 IGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 356 ~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++++++. .++++|+|+.+-+
T Consensus 240 a~~LaAL-DdRIka~v~~~~l 259 (390)
T PF12715_consen 240 AWWLAAL-DDRIKATVANGYL 259 (390)
T ss_dssp HHHHHHH--TT--EEEEES-B
T ss_pred HHHHHHc-chhhHhHhhhhhh
Confidence 9999997 5688887765443
No 45
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.63 E-value=5.8e-15 Score=138.15 Aligned_cols=208 Identities=17% Similarity=0.186 Sum_probs=123.3
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|+||++||..++.. .|......| ++||.|+.+|+||.|...... .....++|..+.+..+++. .+.
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~~~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAPQLDVL-TQRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--LNI 79 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHHHHHHH-HhccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--hCC
Confidence 4689999999876532 243333344 568999999999998764321 1112334444333333332 234
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-----------hccCCCCC---------CCccccc-c---
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----------TMLDPTIP---------LTTAEWE-E--- 397 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-----------~~~~~~~~---------~~~~~~~-~--- 397 (505)
+++.++|+|+||.+++.++.++|+.++++|..++...... .+...... .....|. .
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 6899999999999999999999998998887776432110 00000000 0000000 0
Q ss_pred ---------cCCC-CCHH---HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 398 ---------WGDP-WKEE---FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 398 ---------~g~~-~~~~---~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
.... .... ....+...+....+.++++| +|+++|++|..+|+++++++++.+.. .+++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~- 233 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHP-VLLIANRDDMLVPYTQSLRLAAALPN----AQLKLLP- 233 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCcc-EEEEecCcCcccCHHHHHHHHHhcCC----ceEEEEC-
Confidence 0000 0001 11112223444556777887 99999999999999999888876643 4566776
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 465 ELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 465 ~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++||......++.+. ..+.+||.
T Consensus 234 --~~gH~~~~~~~~~~~--~~i~~fl~ 256 (257)
T TIGR03611 234 --YGGHASNVTDPETFN--RALLDFLK 256 (257)
T ss_pred --CCCCCccccCHHHHH--HHHHHHhc
Confidence 789986554444332 24677764
No 46
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.63 E-value=2.3e-15 Score=128.02 Aligned_cols=145 Identities=19% Similarity=0.299 Sum_probs=106.5
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcE
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 344 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv 344 (505)
+||++||+.+. ...|....+.|+++||.|+.+|+|+.+.... ..++.++++++.+.. .|+++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGY-PDPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHH-CTCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhc-CCCCcE
Confidence 58999998764 2336666789999999999999998876521 124445555543321 288999
Q ss_pred EEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCC
Q 010654 345 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNY 424 (505)
Q Consensus 345 ~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~ 424 (505)
+++|+|+||.+++.++.++ ..++++|+.+|..+ ... +.+.+.
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~------------------------~~~-------------~~~~~~ 105 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD------------------------SED-------------LAKIRI 105 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSG------------------------CHH-------------HTTTTS
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccc------------------------hhh-------------hhccCC
Confidence 9999999999999999987 68999999988311 000 112233
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
| +|+++|++|+.+|+++..+++++++ .+.+++.++ +++|+
T Consensus 106 p-v~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~---g~~H~ 145 (145)
T PF12695_consen 106 P-VLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIP---GAGHF 145 (145)
T ss_dssp E-EEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEET---TS-TT
T ss_pred c-EEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeC---CCcCc
Confidence 5 9999999999999999999999887 456777777 88884
No 47
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.62 E-value=2.7e-15 Score=133.20 Aligned_cols=178 Identities=19% Similarity=0.173 Sum_probs=124.1
Q ss_pred CCCceeeEEEEEeCCccCCCCCC-cEEEEEcCCCCcCCCCCCc--h--hHHHH--HHCCcEEEEEcccCCCCCchhHHHc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSD-PLLLYGYGSYEICNDPAFN--S--SRLSL--LDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~-P~iv~~hGg~~~~~~~~~~--~--~~~~l--~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
.-|.++...++.|++. .+++++ |++|++||+........-. . ..-.| -+.++-|+.|.|- .-|...
T Consensus 169 ~tgneLkYrly~Pkdy-~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~------~if~d~ 241 (387)
T COG4099 169 STGNELKYRLYTPKDY-APDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN------PIFADS 241 (387)
T ss_pred ccCceeeEEEeccccc-CCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccc------cccccc
Confidence 3567899999999999 888887 9999999976443221100 0 00112 2234566666532 222111
Q ss_pred ccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCc
Q 010654 314 GKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 392 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 392 (505)
. ..-........+.++ .|.++..||.+||.+.|.|+||+.+..++.++|+.|+|++..+|--|-
T Consensus 242 e--~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------- 306 (387)
T COG4099 242 E--EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------- 306 (387)
T ss_pred c--cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch-------------
Confidence 1 111123344445555 677888999999999999999999999999999999999998873321
Q ss_pred ccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 393 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 393 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
. ...+++. +.| +.++|+.+|..+|.+++.-+++.|+..+.++++..|.
T Consensus 307 -----------v------~lv~~lk-----~~p-iWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 307 -----------V------YLVRTLK-----KAP-IWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred -----------h------hhhhhhc-----cCc-eEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 0 0012221 345 9999999999999999999999999999988877776
No 48
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.62 E-value=2.3e-14 Score=130.90 Aligned_cols=244 Identities=20% Similarity=0.213 Sum_probs=145.0
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
+..+..+||..+......++.. .+.|+||.+||-.|+..++.-......+.++||.|++.|.||.++.-..-
T Consensus 51 re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~---- 122 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS---- 122 (345)
T ss_pred eEEEEcCCCCEEEEeeccCccc----cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC----
Confidence 3355667777665555554432 45699999999877766653334456788899999999999998753311
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCCchhhhhh----------
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVPFVDVLTT---------- 382 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~~~d~~~~---------- 382 (505)
.........+|+..+++++.++.. +.++.++|.|+||.+.+..+++..+ ...|+++.+--+|+..-
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL 200 (345)
T ss_pred cceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh
Confidence 112222445999999999998754 5789999999999655555444332 23444443332332110
Q ss_pred -c-------------------cCCCCCCC-c------cccccc----CCC--CCHHHHHHHHhCChhhcccCCCCCeEEE
Q 010654 383 -M-------------------LDPTIPLT-T------AEWEEW----GDP--WKEEFYFYMKSYSPVDNVKAQNYPHILV 429 (505)
Q Consensus 383 -~-------------------~~~~~~~~-~------~~~~~~----g~~--~~~~~~~~~~~~sp~~~~~~~~~Pp~Li 429 (505)
+ +....+.. . ....++ -.| .-++..++++..|.+..+++|..| +||
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~P-tLi 279 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKP-TLI 279 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccc-eEE
Confidence 0 00111111 0 000111 111 122334566888999999999998 999
Q ss_pred EccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC-CCChH--HHHHHHHHHHHHHHHhhC
Q 010654 430 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS-KSGRF--ERLREAAFTYTFLMRALS 495 (505)
Q Consensus 430 ~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~-~~~~~--~~~~~~~~~~~fl~~~l~ 495 (505)
||..+|+.+++...-+.-.. ....+.+.+-+ .+||-+ ..+.. ..+-...++.+||+..+.
T Consensus 280 i~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~---~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 280 INAKDDPFMPPEVIPKLQEM---LNPNVLLQLTE---HGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EecCCCCCCChhhCCcchhc---CCCceEEEeec---CCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999987443332221 33344444443 779932 22111 111223458889988764
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.60 E-value=3.1e-14 Score=137.90 Aligned_cols=240 Identities=13% Similarity=0.102 Sum_probs=135.7
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--------------------C---C-chhHHHHHHCCc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--------------------A---F-NSSRLSLLDRGF 293 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--------------------~---~-~~~~~~l~~~G~ 293 (505)
+.+.||..|......|+ .+..+|+++||-.+..... . | ......|+++||
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 46779999987755553 2357999999954332210 1 1 234678999999
Q ss_pred EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc------------------CCCCCCcEEEEeeChHHHH
Q 010654 294 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN------------------CYCTKEKLCIEGRSAGGLL 355 (505)
Q Consensus 294 ~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~rv~i~G~S~GG~~ 355 (505)
.|+.+|.||+|.....-...+.......-++|+...++.+.+. .+-....+.|+||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999999865432000011111123456677777666541 0111247999999999999
Q ss_pred HHHHHhhCCC--------ceeEEEecCCchhhhh---------------------hccCCCCCCCc-cc--c-----ccc
Q 010654 356 IGAVLNMRPD--------LFKAAVAAVPFVDVLT---------------------TMLDPTIPLTT-AE--W-----EEW 398 (505)
Q Consensus 356 ~~~~~~~~p~--------~~~a~v~~~~~~d~~~---------------------~~~~~~~~~~~-~~--~-----~~~ 398 (505)
++.++..+++ .++++|+.+|...+.. .+. +...... .. + ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVF-PTFRISKKIRYEKSPYVNDII 234 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHC-CcccccCccccccChhhhhHH
Confidence 9988765432 5788887777542110 000 0110000 00 0 000
Q ss_pred -CCCC------CHHHHHHHHhCCh--hhcccCC--CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 399 -GDPW------KEEFYFYMKSYSP--VDNVKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 399 -g~~~------~~~~~~~~~~~sp--~~~~~~~--~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
.+|. .......+..... ...+.++ ++| +|++||++|..|++..+.++++++... ..++.+|+ +
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P-~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~---g 308 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIP-ILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLE---D 308 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCC-EEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEEC---C
Confidence 0110 0011111111100 1133444 577 999999999999999998888776543 35677888 8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHH
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++|....+. ...+....+.+||.
T Consensus 309 ~~H~i~~E~-~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEP-GNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCccCC-CHHHHHHHHHHHhh
Confidence 899765432 12233446788874
No 50
>PLN00021 chlorophyllase
Probab=99.60 E-value=1.5e-13 Score=130.67 Aligned_cols=207 Identities=19% Similarity=0.187 Sum_probs=131.1
Q ss_pred ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 244 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 244 ~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
..+++.+++|... +++|+||++||+.... ..|......|+++||+|+.+|++|.++. .....+
T Consensus 37 ~~~p~~v~~P~~~----g~~PvVv~lHG~~~~~--~~y~~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSEA----GTYPVLLFLHGYLLYN--SFYSQLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCceEEEEeCCCC----CCCCEEEEECCCCCCc--ccHHHHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 4688888999653 6799999999986542 2355566788999999999999874321 112345
Q ss_pred HHHHHHHHHHHHc--------CCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCC
Q 010654 324 TDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 324 ~D~~~~~~~l~~~--------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
+|..++++|+.+. ..+|++|++|+|||+||++++.++..+++ .+++++...|+...... ...
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~--~~~--- 174 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKG--KQT--- 174 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccc--cCC---
Confidence 6777777777652 23678899999999999999999988774 57888888776442100 000
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCC-----C----CCCChH-HHHHHHHHhcCCCCCeE
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP-----R----VMYSEP-AKFVAKLREMKTDDNIL 460 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~-----~----vp~~~~-~~~~~~L~~~~~~~~~~ 460 (505)
.| .. ..+.| ...++..| +|++++..|. . .|.... .+|+++.+. +..++
T Consensus 175 ---------~p---~i----l~~~~--~s~~~~~P-~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~ 232 (313)
T PLN00021 175 ---------PP---PV----LTYAP--HSFNLDIP-VLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHF 232 (313)
T ss_pred ---------CC---cc----cccCc--ccccCCCC-eEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---Ceeee
Confidence 01 00 01111 11225677 9999988763 2 234443 677766543 45555
Q ss_pred EEEecCCCCCCCC-CCh--------------------HHHHHHHHHHHHHHHHhhCCC
Q 010654 461 LFKCELGAGHFSK-SGR--------------------FERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 461 ~~~~~~~~gH~~~-~~~--------------------~~~~~~~~~~~~fl~~~l~~~ 497 (505)
+.+ ++||... .+. ..+......+.+||.++|...
T Consensus 233 ~~~---~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 233 VAK---DYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred eec---CCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 666 7788421 111 111122334799999998654
No 51
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=4.2e-14 Score=135.51 Aligned_cols=215 Identities=16% Similarity=0.161 Sum_probs=127.2
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|+++ |.|+.+|.||+|.+...-.. .........++|+.+.+..+++.-. .+
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~-~~~~~~~~~~~~~a~~l~~~l~~l~--~~ 102 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPR-SAPPNSFYTFETWGEQLNDFCSDVV--GD 102 (294)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccc-cccccccCCHHHHHHHHHHHHHHhc--CC
Confidence 378999999876543 466666777766 69999999999876431000 0000112445565555555444322 26
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh---------h-------hccCCCCC--------CCc----cc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL---------T-------TMLDPTIP--------LTT----AE 394 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~---------~-------~~~~~~~~--------~~~----~~ 394 (505)
++.++|||+||.+++.++.++|++++++|..++..... . ........ ... ..
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNI 182 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHH
Confidence 89999999999999999999999999999887643110 0 00000000 000 00
Q ss_pred c-cccCCC--CCHHHHHH----------------HHhCC----hhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 395 W-EEWGDP--WKEEFYFY----------------MKSYS----PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 395 ~-~~~g~~--~~~~~~~~----------------~~~~s----p~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
+ ..++.. ..++.... +..++ +...+.++++| +|+++|++|..+|...++.+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~~~~~-- 259 (294)
T PLN02824 183 LCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP-VLIAWGEKDPWEPVELGRAYANF-- 259 (294)
T ss_pred HHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC-eEEEEecCCCCCChHHHHHHHhc--
Confidence 0 001111 01111111 11111 12345677888 99999999999998877664332
Q ss_pred hcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 452 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 452 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
....+++.++ ++||....+.++.+.. .+.+|+.++
T Consensus 260 --~~~~~~~~i~---~~gH~~~~e~p~~~~~--~i~~fl~~~ 294 (294)
T PLN02824 260 --DAVEDFIVLP---GVGHCPQDEAPELVNP--LIESFVARH 294 (294)
T ss_pred --CCccceEEeC---CCCCChhhhCHHHHHH--HHHHHHhcC
Confidence 2235677887 8899876655554433 578888653
No 52
>PLN02872 triacylglycerol lipase
Probab=99.59 E-value=1.3e-14 Score=142.20 Aligned_cols=145 Identities=21% Similarity=0.270 Sum_probs=94.7
Q ss_pred CCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc----hhHHHHHHCCcEEEEEcccCC
Q 010654 228 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 228 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~d~rG~ 303 (505)
...++.|+..+++.||..+...-+.+........+.|.|+++||...+...+... .....|+++||.|+.+|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 3478899999999999988765442222101123468899999986655443221 123357889999999999997
Q ss_pred CC-CchhHHHc-cc----ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecC
Q 010654 304 GE-LGRQWYEN-GK----FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAV 374 (505)
Q Consensus 304 ~~-~g~~~~~~-~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~ 374 (505)
+. +|...... .. ..+......|+.++++++.+.. .+++.++|||+||.+++.++ .+|+ .++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 63 23211110 01 1122234579999999998653 36899999999999988655 4676 456666666
Q ss_pred Cc
Q 010654 375 PF 376 (505)
Q Consensus 375 ~~ 376 (505)
|+
T Consensus 195 P~ 196 (395)
T PLN02872 195 PI 196 (395)
T ss_pred ch
Confidence 54
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.58 E-value=4.3e-14 Score=125.17 Aligned_cols=186 Identities=16% Similarity=0.081 Sum_probs=110.3
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
|.||++||..++...+........+.+. +|.|+.+|.||.+ ++..+.++.++++. +.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~--~~ 60 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEH--GG 60 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc--CC
Confidence 6899999987655442211222445443 8999999999752 23344455555442 23
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
+++.++|+|+||++++.++.++|. + +|..+|..+....... ........+..-...-..+..+.++...+.. ++
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i~- 134 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTD-YLGENENPYTGQQYVLESRHIYDLKVMQIDP-LE- 134 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHH-hcCCcccccCCCcEEEcHHHHHHHHhcCCcc-CC-
Confidence 589999999999999999999883 3 3556665553222110 0000000010000111234444444444433 33
Q ss_pred CCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 422 QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 422 ~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
...| ++++||++|+.||+.++.+++++. +.++++ |++|.+.. . + +....+.+|+.
T Consensus 135 ~~~~-v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~---ggdH~f~~-~-~--~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDL-IWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEE---GGNHAFVG-F-E--RYFNQIVDFLG 189 (190)
T ss_pred Chhh-EEEEEeCCCCcCCHHHHHHHHHhc-------ceEEEC---CCCcchhh-H-H--HhHHHHHHHhc
Confidence 4565 899999999999999999999843 345566 88998742 2 2 22334677763
No 54
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.58 E-value=1.3e-14 Score=131.91 Aligned_cols=189 Identities=17% Similarity=0.188 Sum_probs=107.9
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHH--HHHCCcEEEEEcccC---CCCCch---hHHHcccccC-CcchHHHHH----
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLS--LLDRGFIFAIAQIRG---GGELGR---QWYENGKFLK-KKNTFTDFI---- 327 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~--l~~~G~~v~~~d~rG---~~~~g~---~~~~~~~~~~-~~~~~~D~~---- 327 (505)
.+.|+||++||-.... ..+. .... .......++.++-+- ....|. .|........ ...+.+++.
T Consensus 12 ~~~~lvi~LHG~G~~~--~~~~-~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE--DLFA-LLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp T-SEEEEEE--TTS-H--HHHH-HHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCceEEEEECCCCCCc--chhH-HHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 5689999999964332 1111 1111 122366777765431 111222 5654221111 112233333
Q ss_pred ---HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCH
Q 010654 328 ---ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKE 404 (505)
Q Consensus 328 ---~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~ 404 (505)
+.++...+.+ ++++||.++|+|+||.+++.++.++|+.+.++++.+|..-..... .
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------------~ 147 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------------E 147 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------------H
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------------c
Confidence 3333333344 899999999999999999999999999999999999864321100 0
Q ss_pred HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHH
Q 010654 405 EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAA 484 (505)
Q Consensus 405 ~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 484 (505)
+ .+ .... ++| ++++||..|++||...+++.++.|++.+.++++..|+ +.||... . +.+.
T Consensus 148 ~--------~~-~~~~--~~p-i~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~---g~gH~i~---~---~~~~ 206 (216)
T PF02230_consen 148 D--------RP-EALA--KTP-ILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYP---GGGHEIS---P---EELR 206 (216)
T ss_dssp C--------CH-CCCC--TS--EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEET---T-SSS-----H---HHHH
T ss_pred c--------cc-cccC--CCc-EEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcC---CCCCCCC---H---HHHH
Confidence 0 00 0011 455 9999999999999999999999999999999999998 7899764 2 2344
Q ss_pred HHHHHHHHhh
Q 010654 485 FTYTFLMRAL 494 (505)
Q Consensus 485 ~~~~fl~~~l 494 (505)
.+.+||.+++
T Consensus 207 ~~~~~l~~~~ 216 (216)
T PF02230_consen 207 DLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHhhhC
Confidence 5788998763
No 55
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=6.2e-14 Score=125.76 Aligned_cols=128 Identities=20% Similarity=0.288 Sum_probs=97.5
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcc------
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENG------ 314 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~------ 314 (505)
+|.+.+++++.|++. .+..|+||++||+.++.........+..++++ ||.|++|| ++...|....
T Consensus 43 ~g~~r~y~l~vP~g~---~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~ 114 (312)
T COG3509 43 NGLKRSYRLYVPPGL---PSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFG 114 (312)
T ss_pred CCCccceEEEcCCCC---CCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCC
Confidence 567788999999986 23449999999987653322111233567774 99999994 3444442211
Q ss_pred --cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 315 --KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 315 --~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
....+..++..+.+.+..|+.+..|||.||+|.|.|.||.|+.+++..+|++|.++...++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 123445788999999999999999999999999999999999999999999999998888754
No 56
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.57 E-value=3.9e-14 Score=131.71 Aligned_cols=206 Identities=18% Similarity=0.208 Sum_probs=120.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|+||++||...... .|......| +.||.|+.+|+||.|..... .....++++.+.+..+++.- +.
T Consensus 12 ~~~~li~~hg~~~~~~--~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~~--~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR--MWDPVLPAL-TPDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDHL--GI 78 (251)
T ss_pred CCCeEEEEcCcccchh--hHHHHHHHh-hcccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHh--CC
Confidence 4689999999654432 344444444 57999999999999865321 11234555555555544432 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--hccC---CCC--CCC---c---ccc--cccCCCCCH--
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TMLD---PTI--PLT---T---AEW--EEWGDPWKE-- 404 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~~~~---~~~--~~~---~---~~~--~~~g~~~~~-- 404 (505)
+++.++|+|+||.+++.++.++|+++++++..++...... .+.. ... ... . ..+ ..+..+...
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 6899999999999999999999999888887655321100 0000 000 000 0 000 001100000
Q ss_pred HHH----------------HHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 405 EFY----------------FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 405 ~~~----------------~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
+.+ ..+...+....+.++++| +|+++|++|..+|.+...++.+.+. ..+++.++ ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~ 230 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVP-TLCIAGDQDGSTPPELVREIADLVP----GARFAEIR---GA 230 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCC-eEEEEeccCCcCChHHHHHHHHhCC----CceEEEEC---CC
Confidence 000 011112223445667888 9999999999999988877776653 34677887 78
Q ss_pred CCCCCCChHHHHHHHHHHHHHH
Q 010654 469 GHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 469 gH~~~~~~~~~~~~~~~~~~fl 490 (505)
||......++.+.. .+.+||
T Consensus 231 gH~~~~~~p~~~~~--~i~~fl 250 (251)
T TIGR02427 231 GHIPCVEQPEAFNA--ALRDFL 250 (251)
T ss_pred CCcccccChHHHHH--HHHHHh
Confidence 99765444443322 345554
No 57
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.56 E-value=1.3e-13 Score=130.87 Aligned_cols=224 Identities=17% Similarity=0.197 Sum_probs=130.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
.+|.+++.... . + +...|.||++||.++... .|......|. .+|.|+.+|+||.|.+... ...
T Consensus 9 ~~~~~~~~~~~-~-~----~~~~~plvllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~--------~~~ 71 (276)
T TIGR02240 9 LDGQSIRTAVR-P-G----KEGLTPLLIFNGIGANLE--LVFPFIEALD-PDLEVIAFDVPGVGGSSTP--------RHP 71 (276)
T ss_pred cCCcEEEEEEe-c-C----CCCCCcEEEEeCCCcchH--HHHHHHHHhc-cCceEEEECCCCCCCCCCC--------CCc
Confidence 36777765421 1 1 112367899999765443 3554455554 4799999999999876421 011
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh---------hhccCCC--C-
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL---------TTMLDPT--I- 388 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~---------~~~~~~~--~- 388 (505)
..++++.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++.+|..++..... ..+.... .
T Consensus 72 ~~~~~~~~~~~~~i~~l--~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (276)
T TIGR02240 72 YRFPGLAKLAARMLDYL--DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQ 149 (276)
T ss_pred CcHHHHHHHHHHHHHHh--CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhc
Confidence 23344444444333331 34679999999999999999999999999999887654210 0000000 0
Q ss_pred CCC----ccc-ccc-c-CCCCC--------------HHHHHHHH--hCChhhcccCCCCCeEEEEccCCCCCCCCChHHH
Q 010654 389 PLT----TAE-WEE-W-GDPWK--------------EEFYFYMK--SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 445 (505)
Q Consensus 389 ~~~----~~~-~~~-~-g~~~~--------------~~~~~~~~--~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~ 445 (505)
+.. ... +.. + ..+.. ...+.... .......+.++++| +|+++|++|+.+|+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~v~~~~~~~ 228 (276)
T TIGR02240 150 PSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQP-TLVLAGDDDPIIPLINMRL 228 (276)
T ss_pred cccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCC-EEEEEeCCCCcCCHHHHHH
Confidence 000 000 000 0 00000 00011111 11122345778898 9999999999999998888
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
+.+.+.. .++++++ + ||....+.++.+.. .+.+|+++.-
T Consensus 229 l~~~~~~----~~~~~i~---~-gH~~~~e~p~~~~~--~i~~fl~~~~ 267 (276)
T TIGR02240 229 LAWRIPN----AELHIID---D-GHLFLITRAEAVAP--IIMKFLAEER 267 (276)
T ss_pred HHHhCCC----CEEEEEc---C-CCchhhccHHHHHH--HHHHHHHHhh
Confidence 8776643 4566665 4 99866555554433 5778887653
No 58
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.55 E-value=1.1e-13 Score=115.86 Aligned_cols=198 Identities=18% Similarity=0.167 Sum_probs=126.1
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC--C-cCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhH
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY--E-ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~--~-~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~ 310 (505)
+.+.+..+-|. +.+. +.|+.. ...|+.|.+|--| + ...+..-......|.++||+++.+|+||-|.++.+|
T Consensus 5 ~~v~i~Gp~G~-le~~-~~~~~~----~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 5 PTVIINGPAGR-LEGR-YEPAKT----PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred CcEEecCCccc-ceec-cCCCCC----CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 34455555553 5544 444432 4567777776322 1 111111122345788899999999999999887766
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
..|..+.+|..++++|+.++.- +..-..+.|+|+|+++++.++.+.|+. ...++..|..+..++
T Consensus 79 ------D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~~df-------- 142 (210)
T COG2945 79 ------DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINAYDF-------- 142 (210)
T ss_pred ------cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCchhh--------
Confidence 5566789999999999998743 222347899999999999999988753 444555554431100
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
+- +..... |.++|+|+.|++|++....+.++- .+.+.++.+ +++|
T Consensus 143 -----------------------s~---l~P~P~-~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~---~a~H 187 (210)
T COG2945 143 -----------------------SF---LAPCPS-PGLVIQGDADDVVDLVAVLKWQES-----IKITVITIP---GADH 187 (210)
T ss_pred -----------------------hh---ccCCCC-CceeEecChhhhhcHHHHHHhhcC-----CCCceEEec---CCCc
Confidence 00 111123 499999999998887666655433 566777887 8899
Q ss_pred CCCCChHHHHHHHHHHHHHHH
Q 010654 471 FSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++...... + ...+.+|+.
T Consensus 188 FF~gKl~~-l--~~~i~~~l~ 205 (210)
T COG2945 188 FFHGKLIE-L--RDTIADFLE 205 (210)
T ss_pred eecccHHH-H--HHHHHHHhh
Confidence 87532222 2 224677773
No 59
>PLN02965 Probable pheophorbidase
Probab=99.55 E-value=5.8e-13 Score=124.71 Aligned_cols=205 Identities=15% Similarity=0.134 Sum_probs=121.0
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC-Cc
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK-EK 343 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~r 343 (505)
.||++||.+.+. ..|......|.+.||.|+.+|+||.|.+... ......++++.+.+..+++. .+. ++
T Consensus 5 ~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDHK 73 (255)
T ss_pred EEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCCC
Confidence 489999987543 3466666788889999999999999866321 01122345544444443333 122 58
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCch---h-----hhhhccCCC-------------CCC----Cccccc-c
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---D-----VLTTMLDPT-------------IPL----TTAEWE-E 397 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~---d-----~~~~~~~~~-------------~~~----~~~~~~-~ 397 (505)
+.++||||||.++..++.++|++++.+|..++.. . ......... .+. ....+. .
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999999999999999999999888766531 1 000000000 000 000000 0
Q ss_pred --cCCCCCHHHHHHH-HhC--Chh----------hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEE
Q 010654 398 --WGDPWKEEFYFYM-KSY--SPV----------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 462 (505)
Q Consensus 398 --~g~~~~~~~~~~~-~~~--sp~----------~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 462 (505)
+... ..+.+... ... .+. ....+++.| +|+++|++|..+|+..++.+++.+.. .+++++
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP-~lvi~g~~D~~~~~~~~~~~~~~~~~----a~~~~i 227 (255)
T PLN02965 154 YYYNQS-PLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVP-RVYIKTAKDNLFDPVRQDVMVENWPP----AQTYVL 227 (255)
T ss_pred HHhcCC-CHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCC-EEEEEcCCCCCCCHHHHHHHHHhCCc----ceEEEe
Confidence 0110 11100000 000 000 122357887 99999999999999888777766543 356777
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 463 KCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 463 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+ ++||....++++.+.. .+.+|+.
T Consensus 228 ~---~~GH~~~~e~p~~v~~--~l~~~~~ 251 (255)
T PLN02965 228 E---DSDHSAFFSVPTTLFQ--YLLQAVS 251 (255)
T ss_pred c---CCCCchhhcCHHHHHH--HHHHHHH
Confidence 7 8899876666665443 3455543
No 60
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.55 E-value=4.6e-13 Score=128.89 Aligned_cols=121 Identities=18% Similarity=0.131 Sum_probs=79.7
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 316 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 316 (505)
.+...||.+|.... .+ ..+.+.||++||+++.... ......+...+|.|+.+|+||.|......
T Consensus 8 ~~~~~~~~~l~y~~---~g----~~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~------ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQ---SG----NPDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHA------ 71 (306)
T ss_pred eEEcCCCcEEEEEE---Cc----CCCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCC------
Confidence 34556787775432 11 1123568999998765432 12223455679999999999988653211
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
........|+.+.+..+.+.- +.+++.++|+|+||++++.++.++|++++++|...+
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred CcccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 111134456666666665542 236799999999999999999999999888777654
No 61
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.54 E-value=7.6e-13 Score=126.85 Aligned_cols=210 Identities=13% Similarity=0.118 Sum_probs=123.1
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++.. .|......|++++ .|+.+|.||.|.+...- ....+.+..+.+..+++.- ..+
T Consensus 27 g~~vvllHG~~~~~~--~w~~~~~~L~~~~-~via~D~~G~G~S~~~~--------~~~~~~~~a~dl~~ll~~l--~~~ 93 (295)
T PRK03592 27 GDPIVFLHGNPTSSY--LWRNIIPHLAGLG-RCLAPDLIGMGASDKPD--------IDYTFADHARYLDAWFDAL--GLD 93 (295)
T ss_pred CCEEEEECCCCCCHH--HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh--CCC
Confidence 478999999876543 3555567787776 99999999998764321 1123344433333333331 236
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh---h----------hhhccCCCC--CCC--cccc-c----c-cC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD---V----------LTTMLDPTI--PLT--TAEW-E----E-WG 399 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d---~----------~~~~~~~~~--~~~--~~~~-~----~-~g 399 (505)
++.++|+|+||.+++.++.++|++++++|..++... + ...+..... .+. ...+ . . +.
T Consensus 94 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
T PRK03592 94 DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSIL 173 (295)
T ss_pred CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCccc
Confidence 899999999999999999999999999998776321 1 000110000 000 0000 0 0 00
Q ss_pred CCCCHHH-----------------HHHHHhCCh--------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHH
Q 010654 400 DPWKEEF-----------------YFYMKSYSP--------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVA 448 (505)
Q Consensus 400 ~~~~~~~-----------------~~~~~~~sp--------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~ 448 (505)
....++. ..+.....+ ...+.++++| +|+++|++|..+++.+..++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~ 252 (295)
T PRK03592 174 RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVP-KLLINAEPGAILTTGAIRDWCR 252 (295)
T ss_pred ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCC-eEEEeccCCcccCcHHHHHHHH
Confidence 0000110 001111000 1123567888 9999999999997666666654
Q ss_pred HHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 449 KLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 449 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
.+.. ..++.+++ ++||....+.++.+.. .+.+|+.+..
T Consensus 253 ~~~~---~~~~~~i~---~~gH~~~~e~p~~v~~--~i~~fl~~~~ 290 (295)
T PRK03592 253 SWPN---QLEITVFG---AGLHFAQEDSPEEIGA--AIAAWLRRLR 290 (295)
T ss_pred Hhhh---hcceeecc---CcchhhhhcCHHHHHH--HHHHHHHHhc
Confidence 4332 34667787 7899876555554433 5788887653
No 62
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.54 E-value=3.5e-13 Score=127.88 Aligned_cols=206 Identities=17% Similarity=0.192 Sum_probs=120.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+||++||.++... .|......| +++|.|+.+|+||.|...... .....++++.+.+..+++.- +.+
T Consensus 28 ~~~vv~~hG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~~--~~~ 95 (278)
T TIGR03056 28 GPLLLLLHGTGASTH--SWRDLMPPL-ARSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAAE--GLS 95 (278)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHH-hhCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHHc--CCC
Confidence 589999999765432 244444555 457999999999988643211 11234556555555555542 235
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC----------CCCCC----------cccccc----c
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP----------TIPLT----------TAEWEE----W 398 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----------~~~~~----------~~~~~~----~ 398 (505)
++.++|||+||.+++.++.++|++++++++.++........... ..+.. ...+.. .
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT 175 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc
Confidence 78999999999999999999999888888776543211100000 00000 000000 0
Q ss_pred CCC---CCHHHH--------------HHHHhCC--h-hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCC
Q 010654 399 GDP---WKEEFY--------------FYMKSYS--P-VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 458 (505)
Q Consensus 399 g~~---~~~~~~--------------~~~~~~s--p-~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~ 458 (505)
+.. .....+ ..+...+ + ...++++++| +|+++|++|..+|+..++++.+.+. ..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~g~~D~~vp~~~~~~~~~~~~----~~~ 250 (278)
T TIGR03056 176 GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIP-LHLIAGEEDKAVPPDESKRAATRVP----TAT 250 (278)
T ss_pred ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCC-EEEEEeCCCcccCHHHHHHHHHhcc----CCe
Confidence 000 000000 0011111 1 1235667888 9999999999999988877766654 345
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 010654 459 ILLFKCELGAGHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 459 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 490 (505)
++.++ ++||.+....++.+. ..+.+|+
T Consensus 251 ~~~~~---~~gH~~~~e~p~~~~--~~i~~f~ 277 (278)
T TIGR03056 251 LHVVP---GGGHLVHEEQADGVV--GLILQAA 277 (278)
T ss_pred EEEEC---CCCCcccccCHHHHH--HHHHHHh
Confidence 67787 889987654444332 2466665
No 63
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.54 E-value=2.5e-13 Score=134.39 Aligned_cols=219 Identities=19% Similarity=0.207 Sum_probs=149.4
Q ss_pred ceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC----CC--chhHHHHHHCCcEEEEEcccCCC
Q 010654 231 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP----AF--NSSRLSLLDRGFIFAIAQIRGGG 304 (505)
Q Consensus 231 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~----~~--~~~~~~l~~~G~~v~~~d~rG~~ 304 (505)
+....+.++.+||.+|...|++|++. ++.|+++..+-.|-..... .. .+....|+++||+|+.+|.||++
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 56677889999999999999999875 8899999987333221110 01 11113789999999999999999
Q ss_pred CCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc
Q 010654 305 ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 384 (505)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~ 384 (505)
++...|.. ... .+.+|-.+.|+|++++++.+ .+||.+|.||+|+...++|+..|--.||++..++..|......
T Consensus 93 ~SeG~~~~----~~~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~~ 166 (563)
T COG2936 93 GSEGVFDP----ESS-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDDA 166 (563)
T ss_pred cCCcccce----ecc-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccccccc
Confidence 98777642 222 57899999999999999987 6899999999999999999888888899999988776322110
Q ss_pred --C----------------CCCCCC--------------c--ccccc------cCCCCC-------HHHHHHHHhCChhh
Q 010654 385 --D----------------PTIPLT--------------T--AEWEE------WGDPWK-------EEFYFYMKSYSPVD 417 (505)
Q Consensus 385 --~----------------~~~~~~--------------~--~~~~~------~g~~~~-------~~~~~~~~~~sp~~ 417 (505)
. ...++. . ..|.+ .+.|.. +...+.+++.+-..
T Consensus 167 ~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~~~ 246 (563)
T COG2936 167 FYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDRVA 246 (563)
T ss_pred ccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCccc
Confidence 0 000000 0 00100 011100 00001123344455
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
...+++.| +|.+.|-.|... ..+.+++..++.. +..+++-|-
T Consensus 247 d~~~i~vP-~L~i~gW~D~~l--~~~~~~~~~~~~r--~~~lvvgPw 288 (563)
T COG2936 247 DLSKIKVP-ALVIGGWSDGYL--HTAIKLFAFLRSR--PVKLVVGPW 288 (563)
T ss_pred ccccCCCc-EEEEcccccccc--cchHHHhhhcccC--CceeEEccc
Confidence 67788998 999999999744 6678888888775 455666664
No 64
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.54 E-value=3e-13 Score=132.89 Aligned_cols=212 Identities=17% Similarity=0.226 Sum_probs=123.0
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|. .+|.|+.+|+||.|.....- .....+++..+.+..+++.- ..+
T Consensus 88 gp~lvllHG~~~~~~--~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~~l~~~l~~l--~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRNIGVLA-KNYTVYAIDLLGFGASDKPP-------GFSYTMETWAELILDFLEEV--VQK 155 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEECCCCCCCCCCCC-------CccccHHHHHHHHHHHHHHh--cCC
Confidence 478999999876533 3555555565 48999999999998753210 01123344443333333321 236
Q ss_pred cEEEEeeChHHHHHHHHHh-hCCCceeEEEecCCchhh---------hhhccCCC---------CC-CC--------ccc
Q 010654 343 KLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDV---------LTTMLDPT---------IP-LT--------TAE 394 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~-~~p~~~~a~v~~~~~~d~---------~~~~~~~~---------~~-~~--------~~~ 394 (505)
++.++|+|+||.+++.++. .+|++++++|..++.... ........ .+ .. ...
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRD 235 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHH
Confidence 8999999999999888776 469999999877653210 00000000 00 00 000
Q ss_pred -c-----cccCCC--CCHHH----------------HHHHHh----CChhhcccCCCCCeEEEEccCCCCCCCCChH-HH
Q 010654 395 -W-----EEWGDP--WKEEF----------------YFYMKS----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AK 445 (505)
Q Consensus 395 -~-----~~~g~~--~~~~~----------------~~~~~~----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~-~~ 445 (505)
. ..+..+ ..++. +..+.. .+....+.++++| +|+++|++|..+|+... .+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-tLii~G~~D~~~p~~~~~~~ 314 (360)
T PLN02679 236 NLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLP-ILVLWGDQDPFTPLDGPVGK 314 (360)
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCC-EEEEEeCCCCCcCchhhHHH
Confidence 0 001111 01111 111110 1122345677898 99999999999998753 24
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 446 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 446 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+++.|.+.-...++++++ ++||....+.++.+.. .+.+||.+
T Consensus 315 ~~~~l~~~ip~~~l~~i~---~aGH~~~~E~Pe~~~~--~I~~FL~~ 356 (360)
T PLN02679 315 YFSSLPSQLPNVTLYVLE---GVGHCPHDDRPDLVHE--KLLPWLAQ 356 (360)
T ss_pred HHHhhhccCCceEEEEcC---CCCCCccccCHHHHHH--HHHHHHHh
Confidence 555665554567788888 8899877666665544 57888865
No 65
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=1.4e-12 Score=129.46 Aligned_cols=184 Identities=7% Similarity=-0.004 Sum_probs=126.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ceeEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s 84 (505)
|..+||++++.++ +.+.|... +.....+.|||||++|++......+.+||++|++++. .++|+.... .....||
T Consensus 211 ~~~~Iyv~dl~tg--~~~~lt~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~~~d~~p~~S 285 (419)
T PRK04043 211 RKPTLYKYNLYTG--KKEKIASS--QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYPGIDVNGNFV 285 (419)
T ss_pred CCCEEEEEECCCC--cEEEEecC--CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCCCccCccEEC
Confidence 4568999999875 45566542 3345567899999999999877678899999999987 888886552 2234599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecC------CeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREG------GLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~------~~~~l~~~~~~~ 156 (505)
|||++|+|.+++.+ ..+||++++++ +..+ .++..... ...|++| .++++.... +..++++++++
T Consensus 286 PDG~~I~F~Sdr~g--~~~Iy~~dl~~-g~~~-rlt~~g~~---~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~- 357 (419)
T PRK04043 286 EDDKRIVFVSDRLG--YPNIFMKKLNS-GSVE-QVVFHGKN---NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN- 357 (419)
T ss_pred CCCCEEEEEECCCC--CceEEEEECCC-CCeE-eCccCCCc---CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC-
Confidence 99999999998743 35999999987 5543 23322222 1356554 677776554 33578888876
Q ss_pred CCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 157 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++..++|+.+. ....++++|||+.++|.... ..-..|+.+++.+..
T Consensus 358 -~g~~~~LT~~~---------~~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~~ 403 (419)
T PRK04043 358 -SDYIRRLTANG---------VNQFPRFSSDGGSIMFIKYL-GNQSALGIIRLNYNK 403 (419)
T ss_pred -CCCeEECCCCC---------CcCCeEECCCCCEEEEEEcc-CCcEEEEEEecCCCe
Confidence 34344554321 11235688999999888654 444578899886544
No 66
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.53 E-value=3.3e-13 Score=128.36 Aligned_cols=107 Identities=17% Similarity=0.099 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|.||++||++++... .|......+.+.||.|+.+|.||.|...... .......++++.+.+..+++.- +.
T Consensus 24 ~~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~ 95 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELEEVREKL--GL 95 (288)
T ss_pred CCCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHHHHHHHc--CC
Confidence 35788999998765432 1222233444459999999999988643210 0110134555555555555542 33
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+++.++|||+||.+++.++..+|+++++++..+++
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 57999999999999999999999999999887664
No 67
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.53 E-value=1.1e-13 Score=129.68 Aligned_cols=208 Identities=16% Similarity=0.158 Sum_probs=119.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
...|.||++||.++... .|......| ..+|.|+.+|.||.|...... ........+|+.++++++ .
T Consensus 14 ~~~~~iv~lhG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~s~~~~-----~~~~~~~~~d~~~~l~~l------~ 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD--NLGVLARDL-VNDHDIIQVDMRNHGLSPRDP-----VMNYPAMAQDLLDTLDAL------Q 79 (255)
T ss_pred CCCCCEEEECCCCCchh--HHHHHHHHH-hhCCeEEEECCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHc------C
Confidence 45688999999876543 244444444 457999999999988654311 011112344555544443 3
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC--Cchhhh----------hhccCCCCCC------------Cccccc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV--PFVDVL----------TTMLDPTIPL------------TTAEWE 396 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~----------~~~~~~~~~~------------~~~~~~ 396 (505)
.+++.++|||+||.+++.++.++|+++++++... |..... .......... ......
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHH
Confidence 3679999999999999999999999999988753 211100 0000000000 000000
Q ss_pred -----ccCCC----CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 397 -----EWGDP----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 397 -----~~g~~----~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
.+... ..+..+..+........+.++++| +|+++|++|..++...++.+.+.+. ..++++++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~ 231 (255)
T PRK10673 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHP-ALFIRGGNSPYVTEAYRDDLLAQFP----QARAHVIA---G 231 (255)
T ss_pred HHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCC-eEEEECCCCCCCCHHHHHHHHHhCC----CcEEEEeC---C
Confidence 00000 000111111111122234556787 9999999999998876666655443 45677787 8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+||......++.+. ..+..||.+
T Consensus 232 ~gH~~~~~~p~~~~--~~l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAEKPDAVL--RAIRRYLND 254 (255)
T ss_pred CCCeeeccCHHHHH--HHHHHHHhc
Confidence 89977655554332 246778764
No 68
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.53 E-value=5.2e-13 Score=126.04 Aligned_cols=130 Identities=14% Similarity=0.028 Sum_probs=92.0
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
+.+.+.. +|..+.+.++.|.+. +.|.||++|||+...... .+......|+++||.|+.+|+||.|.+....
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~-----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~- 75 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGAS-----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN- 75 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCC-----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 3566664 567888998888643 235788888876543221 1223456888999999999999998653221
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
.......+|+.++++++.++.. ..++|.++|+|+||++++.++.. +..++++|..+|..
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 1112456899999999987521 12679999999999999888764 56899999998864
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.52 E-value=1.9e-12 Score=119.77 Aligned_cols=215 Identities=13% Similarity=0.020 Sum_probs=134.4
Q ss_pred EEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCC--CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH
Q 010654 235 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 235 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.+.+++..|. +.++++.|++. ++.|+||++||..+... ...|......|+++||.|+.+|+||+|........
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~ 76 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA 76 (266)
T ss_pred CEEecCCCCc-EEEEEecCCCC----CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc
Confidence 3556677776 44664545432 44689999999654222 12233345688889999999999999866433211
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc--------
Q 010654 313 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML-------- 384 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-------- 384 (505)
.......+|+..+++++.+.+ .++|.++|+|+||.+++.++.++|+.++++|..+|+++...++.
T Consensus 77 ----~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~ 149 (266)
T TIGR03101 77 ----ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLV 149 (266)
T ss_pred ----CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHH
Confidence 111234688999999998764 36899999999999999999999999999999999776332211
Q ss_pred ----CCCCCC-----C----cccccc-cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCC-CCCCCCChHHHHHHH
Q 010654 385 ----DPTIPL-----T----TAEWEE-WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAK 449 (505)
Q Consensus 385 ----~~~~~~-----~----~~~~~~-~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~-D~~vp~~~~~~~~~~ 449 (505)
...... . ..+..+ .|..-.++....+.+.+....+.. .. ++|++.-.. +..-+.....++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 227 (266)
T TIGR03101 150 ARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NC-PVHWFEVRPEEGATLSPVFSRLGEQ 227 (266)
T ss_pred HHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CC-ceEEEEeccccCCCCCHHHHHHHHH
Confidence 100000 0 000001 132223444444443333222211 22 477775532 223344567899999
Q ss_pred HHhcCCCCCeEEEE
Q 010654 450 LREMKTDDNILLFK 463 (505)
Q Consensus 450 L~~~~~~~~~~~~~ 463 (505)
+++.|+.++...|+
T Consensus 228 ~~~~g~~v~~~~~~ 241 (266)
T TIGR03101 228 WVQSGVEVTVDLVP 241 (266)
T ss_pred HHHcCCeEeeeecC
Confidence 99999999988888
No 70
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.51 E-value=6.9e-13 Score=123.12 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=73.9
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKE 342 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 342 (505)
|+||++||.++... .|......|+ +||.|+.+|.||.|..... .......++++... +..+.+. .+.+
T Consensus 2 ~~vv~~hG~~~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGIE 70 (251)
T ss_pred CEEEEEcCCCCchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCCC
Confidence 78999999765543 3555556776 8999999999998865321 11122344554444 4444443 2457
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.++|||+||.+++.++.++|+.+++++..++..
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 89999999999999999999999999998877643
No 71
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.51 E-value=1.8e-13 Score=126.87 Aligned_cols=198 Identities=15% Similarity=0.115 Sum_probs=116.6
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.++... .|......|. .+|.|+.+|+||.|..... ....++++.+ .+.+. . .++
T Consensus 5 ~~iv~~HG~~~~~~--~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~~~~~~~~---~~~~~--~-~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMNAE--VFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------GPLSLADAAE---AIAAQ--A-PDP 66 (245)
T ss_pred ceEEEEcCCCCchh--hHHHHHHhhc-cCeEEEEecCCcCccCCCC---------CCcCHHHHHH---HHHHh--C-CCC
Confidence 78999999755432 3444445554 5799999999998864321 1123444443 33332 1 268
Q ss_pred EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--hcc---------------CCCCCCCcccc---cccCCCC-
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TML---------------DPTIPLTTAEW---EEWGDPW- 402 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~~~---------------~~~~~~~~~~~---~~~g~~~- 402 (505)
+.++|+|+||++++.++.++|++++++|..++...+.. .+. ..........+ ..++.+.
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999887655321100 000 00000000000 0011110
Q ss_pred CH---------------------HHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 403 KE---------------------EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 403 ~~---------------------~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
.. ..+..+...+....+.++++| +|+++|++|..+|+..++.+.+.+. .+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~ 221 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVP-FLRLYGYLDGLVPAKVVPYLDKLAP----HSELYI 221 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCC-EEEEeecCCcccCHHHHHHHHHhCC----CCeEEE
Confidence 00 001111112223445678898 9999999999999988877766553 467788
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHHH
Q 010654 462 FKCELGAGHFSKSGRFERLREAAFTYTF 489 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~~~~~~~~~~~~~f 489 (505)
++ ++||......++.+.. .+.+|
T Consensus 222 ~~---~~gH~~~~e~p~~~~~--~i~~f 244 (245)
T TIGR01738 222 FA---KAAHAPFLSHAEAFCA--LLVAF 244 (245)
T ss_pred eC---CCCCCccccCHHHHHH--HHHhh
Confidence 88 8899876555554433 34444
No 72
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.50 E-value=1.4e-12 Score=123.86 Aligned_cols=198 Identities=20% Similarity=0.215 Sum_probs=129.1
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCC---CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKL---DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~---~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
.-++..++.+||-.+....+.++.. .. .+..|+||++||-.+++....-........++||.|++.|.||.++..-
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~-~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDS-RCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCccc-ccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 3455556778888888877766553 21 2457999999998776655333333445666899999999999776432
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCchhhh---hh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVL---TT 382 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~d~~---~~ 382 (505)
.- ....-...-+|+..+++++.++-- ..++.++|.|+||.+...++++..+ +.+|++..+|. |.. ..
T Consensus 171 tT----pr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~~~~~~ 243 (409)
T KOG1838|consen 171 TT----PRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLLAASRS 243 (409)
T ss_pred CC----CceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc-hhhhhhhH
Confidence 11 111222456999999999998732 2479999999999999998887433 45555555663 311 00
Q ss_pred cc---------------------CCCC-----------C---CCccccc------ccCCCCCHHHHHHHHhCChhhcccC
Q 010654 383 ML---------------------DPTI-----------P---LTTAEWE------EWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 383 ~~---------------------~~~~-----------~---~~~~~~~------~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
+. .... . -+..++. .+|.+.-. +++++.|+...+++
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~d---eYY~~aSs~~~v~~ 320 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVD---EYYKKASSSNYVDK 320 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHH---HHHhhcchhhhccc
Confidence 00 0000 0 0001111 13444322 45588899999999
Q ss_pred CCCCeEEEEccCCCCCCCCC
Q 010654 422 QNYPHILVTAGLNDPRVMYS 441 (505)
Q Consensus 422 ~~~Pp~Li~~G~~D~~vp~~ 441 (505)
|+.| +|+|++.+|+++|..
T Consensus 321 I~VP-~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 321 IKVP-LLCINAADDPVVPEE 339 (409)
T ss_pred cccc-EEEEecCCCCCCCcc
Confidence 9998 999999999999985
No 73
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.50 E-value=2.1e-12 Score=128.32 Aligned_cols=216 Identities=15% Similarity=0.116 Sum_probs=122.6
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHH-HHHHHH-HHHHHcCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT-DFIACA-EYLIKNCYC 339 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~-D~~~~~-~~l~~~~~~ 339 (505)
+.|+||++||.++... .|......|++ +|.|+.+|+||.|.....-. ......... .+.+.+ +++...
T Consensus 104 ~~p~vvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~----~~~~~~~~~~~~~~~i~~~~~~l--- 173 (402)
T PLN02894 104 DAPTLVMVHGYGASQG--FFFRNFDALAS-RFRVIAIDQLGWGGSSRPDF----TCKSTEETEAWFIDSFEEWRKAK--- 173 (402)
T ss_pred CCCEEEEECCCCcchh--HHHHHHHHHHh-CCEEEEECCCCCCCCCCCCc----ccccHHHHHHHHHHHHHHHHHHc---
Confidence 4689999999865432 24344455654 69999999999987643110 000001111 222223 333333
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh--h----cc----------------CCCCC--------
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--T----ML----------------DPTIP-------- 389 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~--~----~~----------------~~~~~-------- 389 (505)
+.+++.++|||+||++++.++.++|++++++|..+|..-... . .. ....|
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 253 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLG 253 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhcc
Confidence 346899999999999999999999999999887765321000 0 00 00000
Q ss_pred -CC---cccc--ccc-----C--CC-CCHHHH-H-----------------HHH-----hCChh-hcccCCCCCeEEEEc
Q 010654 390 -LT---TAEW--EEW-----G--DP-WKEEFY-F-----------------YMK-----SYSPV-DNVKAQNYPHILVTA 431 (505)
Q Consensus 390 -~~---~~~~--~~~-----g--~~-~~~~~~-~-----------------~~~-----~~sp~-~~~~~~~~Pp~Li~~ 431 (505)
+. ...+ ..+ + .. ...+.+ + ++. ...|+ ..+.++++| +|+++
T Consensus 254 p~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP-~liI~ 332 (402)
T PLN02894 254 PWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVP-TTFIY 332 (402)
T ss_pred chhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCC-EEEEE
Confidence 00 0000 000 0 00 011100 0 110 11232 346777898 99999
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 432 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 432 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
|++|..++ ....++.+.+ +.++++++++ ++||....+.++.+.. .+.+|+...+...
T Consensus 333 G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~---~aGH~~~~E~P~~f~~--~l~~~~~~~~~~~ 389 (402)
T PLN02894 333 GRHDWMNY-EGAVEARKRM---KVPCEIIRVP---QGGHFVFLDNPSGFHS--AVLYACRKYLSPD 389 (402)
T ss_pred eCCCCCCc-HHHHHHHHHc---CCCCcEEEeC---CCCCeeeccCHHHHHH--HHHHHHHHhccCC
Confidence 99997654 5555544433 4457788888 8899876666665544 5778888877653
No 74
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.50 E-value=6.5e-13 Score=131.78 Aligned_cols=206 Identities=14% Similarity=0.141 Sum_probs=120.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
++.|.||++||.++.... |......|. ++|.|+.+|+||+|..... .....+.++.+.+..+++. ++
T Consensus 129 ~~~~~vl~~HG~~~~~~~--~~~~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~ 195 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN--WLFNHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LG 195 (371)
T ss_pred CCCCeEEEECCCCCccch--HHHHHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cC
Confidence 345889999987654332 443444544 4699999999999875321 1123456666666666554 45
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-------hhccCCCCCCCcccc--cccCCC--CC------
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-------TTMLDPTIPLTTAEW--EEWGDP--WK------ 403 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-------~~~~~~~~~~~~~~~--~~~g~~--~~------ 403 (505)
+.++.++|||+||++++.++.++|++++++++.+|..... ..+...........+ ..+..+ ..
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVED 275 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHH
Confidence 5789999999999999999998999999998877642110 000000000000000 000000 00
Q ss_pred ----------HHHHHHHH---------hCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEe
Q 010654 404 ----------EEFYFYMK---------SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 464 (505)
Q Consensus 404 ----------~~~~~~~~---------~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 464 (505)
...+..+. ..+....+.++++| +|++||++|..+|+.++..+. ..+++.+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~vp~~~~~~l~-------~~~~~~~~~- 346 (371)
T PRK14875 276 LLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIP-VLVIWGEQDRIIPAAHAQGLP-------DGVAVHVLP- 346 (371)
T ss_pred HHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCC-EEEEEECCCCccCHHHHhhcc-------CCCeEEEeC-
Confidence 00000000 01222345677888 999999999999987765442 135667777
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 465 ELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 465 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
++||......++.+. ..+.+||.+
T Consensus 347 --~~gH~~~~e~p~~~~--~~i~~fl~~ 370 (371)
T PRK14875 347 --GAGHMPQMEAAADVN--RLLAEFLGK 370 (371)
T ss_pred --CCCCChhhhCHHHHH--HHHHHHhcc
Confidence 889976544443322 235567654
No 75
>PRK06489 hypothetical protein; Provisional
Probab=99.48 E-value=6.7e-13 Score=130.67 Aligned_cols=217 Identities=14% Similarity=0.175 Sum_probs=120.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHH-------HHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLS-------LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLI 334 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~-------l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~ 334 (505)
.|.||++||++++...+.-...... +..++|.|+.+|+||+|.+...-. ..........++++.+.+ ..+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~-~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD-GLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc-CCCCCCCcccHHHHHHHHHHHHH
Confidence 5889999998765433210011112 225789999999999986532100 000000123456665443 3343
Q ss_pred HcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCCch------hh-hhh-----cc-CC-----CCCCCccc-
Q 010654 335 KNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV------DV-LTT-----ML-DP-----TIPLTTAE- 394 (505)
Q Consensus 335 ~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~------d~-~~~-----~~-~~-----~~~~~~~~- 394 (505)
+.-.+ +++. |+|+|+||++++.++.++|++++++|..++.. ++ ... .. .. ........
T Consensus 148 ~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
T PRK06489 148 EGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSL 225 (360)
T ss_pred HhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 43222 5664 89999999999999999999999998775531 00 000 00 00 00000000
Q ss_pred ---c---c--------cc--CCCC------------------CHHHH----HHHHhCChhhcccCCCCCeEEEEccCCCC
Q 010654 395 ---W---E--------EW--GDPW------------------KEEFY----FYMKSYSPVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 395 ---~---~--------~~--g~~~------------------~~~~~----~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
+ . .+ ..+. +...+ ......+....+.++++| +|+++|++|.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~P-vLvI~G~~D~ 304 (360)
T PRK06489 226 KRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAP-VLAINSADDE 304 (360)
T ss_pred HHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCC-EEEEecCCCc
Confidence 0 0 00 0000 01110 001112333456778998 9999999999
Q ss_pred CCCCChH--HHHHHHHHhcCCCCCeEEEEecCC----CCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 437 RVMYSEP--AKFVAKLREMKTDDNILLFKCELG----AGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 437 ~vp~~~~--~~~~~~L~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.+|+..+ +++++.+. ..++++++ + +||... ..++.+.. .+.+||.+.
T Consensus 305 ~~p~~~~~~~~la~~ip----~a~l~~i~---~a~~~~GH~~~-e~P~~~~~--~i~~FL~~~ 357 (360)
T PRK06489 305 RNPPETGVMEAALKRVK----HGRLVLIP---ASPETRGHGTT-GSAKFWKA--YLAEFLAQV 357 (360)
T ss_pred ccChhhHHHHHHHHhCc----CCeEEEEC---CCCCCCCcccc-cCHHHHHH--HHHHHHHhc
Confidence 9998876 56665553 35678888 5 499765 45555444 477888764
No 76
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.48 E-value=1.1e-12 Score=131.02 Aligned_cols=125 Identities=13% Similarity=0.110 Sum_probs=81.8
Q ss_pred EEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchh-HHHHH---HCCcEEEEEcccCCCCCchhHHH
Q 010654 237 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS-RLSLL---DRGFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 237 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~-~~~l~---~~G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.|.+..|.+++....-|++. ...|.||++||.++... .|... ...|+ +++|.|+.+|+||.|.+...
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p--- 249 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP--- 249 (481)
T ss_pred eeEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC---
Confidence 34444556776665445432 23478999999876543 23321 23343 47999999999998865421
Q ss_pred cccccCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 313 NGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
......+++..+.+. .+++.- ..+++.++|||+||.+++.++.++|++++++|..++.
T Consensus 250 ----~~~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 250 ----ADSLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ----CCCcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 011133455555442 344432 2368999999999999999999999999999988753
No 77
>COG0400 Predicted esterase [General function prediction only]
Probab=99.48 E-value=8.9e-13 Score=116.30 Aligned_cols=184 Identities=16% Similarity=0.159 Sum_probs=121.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCc-------chHHHHHHHHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKK-------NTFTDFIACAEYL 333 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~-------~~~~D~~~~~~~l 333 (505)
...|+||++||..+. ...|.+ ...+..-.+.++.+.-+-.-..+..|.. ....+. ...+.+.++++.+
T Consensus 16 p~~~~iilLHG~Ggd--e~~~~~-~~~~~~P~~~~is~rG~v~~~g~~~~f~--~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 16 PAAPLLILLHGLGGD--ELDLVP-LPELILPNATLVSPRGPVAENGGPRFFR--RYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCcEEEEEecCCCC--hhhhhh-hhhhcCCCCeEEcCCCCccccCccccee--ecCCCccchhhHHHHHHHHHHHHHHH
Confidence 457899999996543 222333 2222223466666644333222333321 111111 2334445566666
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhC
Q 010654 334 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSY 413 (505)
Q Consensus 334 ~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 413 (505)
.++..+|++|+.+.|+|.|+.+++.++.++|++|+++++..|..-....
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~------------------------------- 139 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE------------------------------- 139 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------------------------------
Confidence 6677789999999999999999999999999999999999885321100
Q ss_pred ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 414 SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 414 sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+..+. ..+ |||++||+.|++||...+.++.+.|++.|.+++...++ .||.... + .+..+..|+.+.
T Consensus 140 -~~~~~--~~~-pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~----~GH~i~~---e---~~~~~~~wl~~~ 205 (207)
T COG0400 140 -LLPDL--AGT-PILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE----GGHEIPP---E---ELEAARSWLANT 205 (207)
T ss_pred -ccccc--CCC-eEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec----CCCcCCH---H---HHHHHHHHHHhc
Confidence 00001 124 59999999999999999999999999999999888775 5997642 2 223456688765
Q ss_pred h
Q 010654 494 L 494 (505)
Q Consensus 494 l 494 (505)
+
T Consensus 206 ~ 206 (207)
T COG0400 206 L 206 (207)
T ss_pred c
Confidence 4
No 78
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.47 E-value=6.5e-12 Score=115.38 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=75.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
+..|+|+++||-|....+ |......|+++||.|+++|.||.|.....-.. ....-.....|+.+.++.|.
T Consensus 42 ~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~--~~Yt~~~l~~di~~lld~Lg------ 111 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHI--SEYTIDELVGDIVALLDHLG------ 111 (322)
T ss_pred CCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCCCc--ceeeHHHHHHHHHHHHHHhc------
Confidence 457999999999987655 34445789999999999999988764321100 00001123445555444443
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
-+|+.++||++|+.++..++..+|++.++.|....
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv 146 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNV 146 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChhhcceEEEecC
Confidence 37999999999999999999999999999987654
No 79
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.45 E-value=1.8e-12 Score=127.09 Aligned_cols=109 Identities=20% Similarity=0.189 Sum_probs=76.0
Q ss_pred CCcEEEEEcCCCCcCC---CCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 262 SDPLLLYGYGSYEICN---DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~---~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
+.| ||++||-..... ...+......|+++||.|+.+|+||.+..... .........|+.++++++.++..
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------LTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------CCHHHHHHHHHHHHHHHHHHHhC
Confidence 345 788887432111 11233456789999999999999987642111 01111222457888999987642
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 379 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~ 379 (505)
.+++.++|||+||.+++.++..+|+.+++++..++..+.
T Consensus 135 --~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 135 --LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred --CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 368999999999999999999899999999988887664
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.45 E-value=3.1e-12 Score=125.55 Aligned_cols=112 Identities=14% Similarity=0.082 Sum_probs=73.2
Q ss_pred CcEEEEEcCCCCcCCCC---------CCchhH---HHHHHCCcEEEEEcccC--CCCCch-hHHHccc--c-cCCcchHH
Q 010654 263 DPLLLYGYGSYEICNDP---------AFNSSR---LSLLDRGFIFAIAQIRG--GGELGR-QWYENGK--F-LKKKNTFT 324 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~rG--~~~~g~-~~~~~~~--~-~~~~~~~~ 324 (505)
.|.||++||..++.... .|.... ..|..++|.|+.+|+|| +|..+. .+...+. . ......++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999976643211 122221 25557899999999999 343332 1110010 0 11134567
Q ss_pred HHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 325 DFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 325 D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
|+.+.+..+++.-.+ ++ +.++|+|+||.+++.++.++|++++.+|+.++.
T Consensus 111 ~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 111 DDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 777766666554322 56 899999999999999999999999988877654
No 81
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.45 E-value=8.3e-14 Score=127.28 Aligned_cols=189 Identities=20% Similarity=0.262 Sum_probs=114.0
Q ss_pred EEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEE
Q 010654 266 LLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 345 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~ 345 (505)
||++||.++.. ..|......| ++||.|+.+|+||.|...... ......+++..+.+..+++.-. .+++.
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~l~~~l~~~~--~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPP------DYSPYSIEDYAEDLAELLDALG--IKKVI 69 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHS------SGSGGSHHHHHHHHHHHHHHTT--TSSEE
T ss_pred eEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEecCCcccccccc------ccCCcchhhhhhhhhhcccccc--ccccc
Confidence 78999987654 3466666677 589999999999988754321 1122334444444444444322 26899
Q ss_pred EEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc--------cCCCCC--------CCcccccccCCCC-CHH---
Q 010654 346 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--------LDPTIP--------LTTAEWEEWGDPW-KEE--- 405 (505)
Q Consensus 346 i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~--------~~~~~~--------~~~~~~~~~g~~~-~~~--- 405 (505)
++|||+||.+++.++.++|++++++|..+|........ ...... +....+..+-... ..+
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998877432110 000000 0000000000000 000
Q ss_pred -----HHHHH----HhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 406 -----FYFYM----KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 406 -----~~~~~----~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
..+.+ ...++...+.++++| +++++|+.|..++.....++.+.+ ..++++.++ ++||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-vl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~---~~gH~~~ 218 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPRIKVP-VLVIHGEDDPIVPPESAEELADKL----PNAELVVIP---GAGHFLF 218 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGSSSE-EEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEET---TSSSTHH
T ss_pred ccccccccccccccccccccccccccCCC-eEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEEC---CCCCccH
Confidence 00111 112333556677887 999999999999965555555444 356778887 8899753
No 82
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.45 E-value=2.9e-12 Score=121.92 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=73.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+... ..|......| .++|.|+.+|+||.|.+... ......++++.+.+..++++- +.+
T Consensus 34 ~~~iv~lHG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~ 101 (286)
T PRK03204 34 GPPILLCHGNPTWS--FLYRDIIVAL-RDRFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDHL--GLD 101 (286)
T ss_pred CCEEEEECCCCccH--HHHHHHHHHH-hCCcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHh--CCC
Confidence 47899999986422 2244434444 45799999999999865431 111235677777777777653 346
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
++.++|||+||.++..++..+|++++++|..++.
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 7999999999999999999999999998876553
No 83
>PRK07581 hypothetical protein; Validated
Probab=99.45 E-value=1.2e-12 Score=128.13 Aligned_cols=220 Identities=15% Similarity=0.085 Sum_probs=120.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCch-hHHHHHHCCcEEEEEcccCCCCCchhHHHccc---ccCCcchH-HHHHHHHHHHHH-
Q 010654 262 SDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELGRQWYENGK---FLKKKNTF-TDFIACAEYLIK- 335 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~---~~~~~~~~-~D~~~~~~~l~~- 335 (505)
+.|+||+.||+.+....+.+.. ....|...+|.|+++|.||.|.+......... .......+ +|+.+.+..+.+
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 4577777777654433221110 01256567899999999999875432110000 00001123 444443444544
Q ss_pred cCCCCCCcE-EEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh-----------hhhccC-CCC--------C-----
Q 010654 336 NCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV-----------LTTMLD-PTI--------P----- 389 (505)
Q Consensus 336 ~~~~d~~rv-~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~-----------~~~~~~-~~~--------~----- 389 (505)
.+. +++ .|+|+|+||++++.++.++|++++.+|..++.... ...+.. ... +
T Consensus 120 lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (339)
T PRK07581 120 FGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLR 196 (339)
T ss_pred hCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHH
Confidence 332 674 68999999999999999999999988877442210 000000 000 0
Q ss_pred -----C----Ccccc-cc-----cC----------------CCCCHHHHHH----HHh----------CChhhcccCCCC
Q 010654 390 -----L----TTAEW-EE-----WG----------------DPWKEEFYFY----MKS----------YSPVDNVKAQNY 424 (505)
Q Consensus 390 -----~----~~~~~-~~-----~g----------------~~~~~~~~~~----~~~----------~sp~~~~~~~~~ 424 (505)
. ....+ .. .+ ...++..+.. +.. .+....+.++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~ 276 (339)
T PRK07581 197 AHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITA 276 (339)
T ss_pred HHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCC
Confidence 0 00000 00 00 0000000000 000 011234556789
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC-CCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG-AGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
| +|+++|+.|..+|+..++.+.+.+.. .++++++ + +||......+..+.. .+.+|+.+.+
T Consensus 277 P-tLvI~G~~D~~~p~~~~~~l~~~ip~----a~l~~i~---~~~GH~~~~~~~~~~~~--~~~~~~~~~~ 337 (339)
T PRK07581 277 K-TFVMPISTDLYFPPEDCEAEAALIPN----AELRPIE---SIWGHLAGFGQNPADIA--FIDAALKELL 337 (339)
T ss_pred C-EEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEeC---CCCCccccccCcHHHHH--HHHHHHHHHH
Confidence 8 99999999999999888887776643 4677787 7 799765545554443 5778887765
No 84
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=1.3e-11 Score=123.50 Aligned_cols=192 Identities=11% Similarity=0.050 Sum_probs=123.7
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcE--EEEEeccccceEEEEEeCCCCCceeeeecccccee-E
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKF--LFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 81 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~--i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~ 81 (505)
.+..+||+.|.... ..+.+... ......|+|||||+. ++|.+......+||++++++++ .++++....... .
T Consensus 162 ~~~~~l~~~d~dG~--~~~~lt~~--~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~-~~~lt~~~g~~~~p 236 (428)
T PRK01029 162 LKQGELWSVDYDGQ--NLRPLTQE--HSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA-GKKILALQGNQLMP 236 (428)
T ss_pred cccceEEEEcCCCC--CceEcccC--CCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCC-ceEeecCCCCccce
Confidence 35778999998543 34555543 224468999999987 4446665567899999999996 777775442222 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEe--eCCC--CCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLAC--PVDN--TSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~--~~~~--~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
.|||||++|+|.++..+. ..+|+. +++. .+..+ .++.........+.|++| .|++....++..++++++++
T Consensus 237 ~wSPDG~~Laf~s~~~g~--~di~~~~~~~~~g~~g~~~-~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~ 313 (428)
T PRK01029 237 TFSPRKKLLAFISDRYGN--PDLFIQSFSLETGAIGKPR-RLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQID 313 (428)
T ss_pred EECCCCCEEEEEECCCCC--cceeEEEeecccCCCCcce-EeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECc
Confidence 499999999999876433 356654 5443 12334 344332222346788876 57777767777788888876
Q ss_pred CCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 156 AVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+...+.|+. .. .....+.++|||+.++|..... ...+|+++++.+++
T Consensus 314 ~~g~~~~~lt~------~~--~~~~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~ 362 (428)
T PRK01029 314 PEGQSPRLLTK------KY--RNSSCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGR 362 (428)
T ss_pred ccccceEEecc------CC--CCccceeECCCCCEEEEEEcCC-CCcEEEEEECCCCC
Confidence 43332322221 11 1123356889999998876543 24589999998887
No 85
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=6.1e-11 Score=119.14 Aligned_cols=188 Identities=10% Similarity=0.072 Sum_probs=126.6
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEe
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAA 83 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~ 83 (505)
.+.++||++|.... ..+.+... ......++|||||++|+|.+.......||++|+++++ .+.++..... ....|
T Consensus 176 ~~~~~l~~~d~dg~--~~~~lt~~--~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~-~~~l~~~~~~~~~~~~ 250 (429)
T PRK03629 176 QFPYELRVSDYDGY--NQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAF 250 (429)
T ss_pred CcceeEEEEcCCCC--CCEEeecC--CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC-eEEccCCCCCcCCeEE
Confidence 45778999998543 23445443 3456789999999999998766567889999999986 7776643322 23459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
||||++|+|....++ ..+||++|+++ +..+ .++.... ....+.|++| .+++....++..+++.++++ ++..
T Consensus 251 SPDG~~La~~~~~~g--~~~I~~~d~~t-g~~~-~lt~~~~-~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~--~g~~ 323 (429)
T PRK03629 251 SPDGSKLAFALSKTG--SLNLYVMDLAS-GQIR-QVTDGRS-NNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN--GGAP 323 (429)
T ss_pred CCCCCEEEEEEcCCC--CcEEEEEECCC-CCEE-EccCCCC-CcCceEECCCCCEEEEEeCCCCCceEEEEECC--CCCe
Confidence 999999999876533 34799999986 4444 4454432 3457788876 57777776677788888775 3333
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++ +.... ....+.+++|++.+++.... .....++.+++.+++
T Consensus 324 ~~l------t~~~~--~~~~~~~SpDG~~Ia~~~~~-~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 324 QRI------TWEGS--QNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATGG 366 (429)
T ss_pred EEe------ecCCC--CccCEEECCCCCEEEEEEcc-CCCceEEEEECCCCC
Confidence 222 21111 11234578899988876543 334579999998876
No 86
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.44 E-value=3e-12 Score=120.05 Aligned_cols=194 Identities=14% Similarity=0.117 Sum_probs=115.2
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.++... .|......|. ..|.|+.+|+||.|.... + ....++++.+ .+.+. ..+
T Consensus 13 ~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~-~--------~~~~~~~~~~---~l~~~---~~~ 74 (256)
T PRK10349 13 NVHLVLLHGWGLNAE--VWRCIDEELS-SHFTLHLVDLPGFGRSRG-F--------GALSLADMAE---AVLQQ---APD 74 (256)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHh-cCCEEEEecCCCCCCCCC-C--------CCCCHHHHHH---HHHhc---CCC
Confidence 357999999765433 3555556665 459999999999986532 0 1123344433 33333 247
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh-------------cc---CCCCCCCccccc---ccCCCC-
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------ML---DPTIPLTTAEWE---EWGDPW- 402 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~-------------~~---~~~~~~~~~~~~---~~g~~~- 402 (505)
++.++|||+||++++.++.++|++++.+|...+....... +. ..........+. .++.+.
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA 154 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH
Confidence 8999999999999999999999999999876553111000 00 000000000000 001110
Q ss_pred CHH---------------------HHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 403 KEE---------------------FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 403 ~~~---------------------~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
..+ ....+...+....+.++++| +|+++|++|..+|.+.+..+.+.+. ..++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~ 229 (256)
T PRK10349 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMP-FLRLYGYLDGLVPRKVVPMLDKLWP----HSESYI 229 (256)
T ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCC-eEEEecCCCccCCHHHHHHHHHhCC----CCeEEE
Confidence 000 00111222333456677898 9999999999998877665555443 457788
Q ss_pred EEecCCCCCCCCCChHHHHHH
Q 010654 462 FKCELGAGHFSKSGRFERLRE 482 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~~~~~~~ 482 (505)
++ ++||....+.++.+..
T Consensus 230 i~---~~gH~~~~e~p~~f~~ 247 (256)
T PRK10349 230 FA---KAAHAPFISHPAEFCH 247 (256)
T ss_pred eC---CCCCCccccCHHHHHH
Confidence 88 8899877666665443
No 87
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.43 E-value=3.3e-11 Score=119.79 Aligned_cols=185 Identities=8% Similarity=0.086 Sum_probs=125.1
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcE-EEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEe
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKF-LFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAA 83 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~-i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~ 83 (505)
+..+||+.|.... ..+.+... . ....+.|||||++ +++++......+||++|+.+++ .++|+...... ...|
T Consensus 167 ~~~~l~~~d~dg~--~~~~~~~~--~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~-~~~lt~~~g~~~~~~~ 240 (419)
T PRK04043 167 KKSNIVLADYTLT--YQKVIVKG--G-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK-KEKIASSQGMLVVSDV 240 (419)
T ss_pred CcceEEEECCCCC--ceeEEccC--C-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc-EEEEecCCCcEEeeEE
Confidence 4678999887322 23334432 2 5668999999997 6655655456799999999997 88887543222 2459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
||||++++|....++ +.+||++++++ +..+ .++...... ....|++| .++|+....+..++++++++ ++..
T Consensus 241 SPDG~~la~~~~~~g--~~~Iy~~dl~~-g~~~-~LT~~~~~d-~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~--~g~~ 313 (419)
T PRK04043 241 SKDGSKLLLTMAPKG--QPDIYLYDTNT-KTLT-QITNYPGID-VNGNFVEDDKRIVFVSDRLGYPNIFMKKLN--SGSV 313 (419)
T ss_pred CCCCCEEEEEEccCC--CcEEEEEECCC-CcEE-EcccCCCcc-CccEECCCCCEEEEEECCCCCceEEEEECC--CCCe
Confidence 999999999987633 57999999986 4444 455443321 23456664 78888888888889998886 3333
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCC-----CCceEEEEECCCCc
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR-----TPPSVYDYDMDMGI 213 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~ 213 (505)
++++ +. ..+ ...++|||+.++|+..... ....|+++++.+++
T Consensus 314 ~rlt------~~-g~~---~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~ 360 (419)
T PRK04043 314 EQVV------FH-GKN---NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY 360 (419)
T ss_pred EeCc------cC-CCc---CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence 3222 11 111 1367899999998876542 23589999998887
No 88
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.43 E-value=4.4e-12 Score=119.69 Aligned_cols=200 Identities=20% Similarity=0.268 Sum_probs=123.7
Q ss_pred HHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhh-
Q 010654 285 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNM- 362 (505)
Q Consensus 285 ~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~- 362 (505)
...|+++||+|+++||.|-|. .|.. .......+-|.+.|++.+... +.-...+++++|+|.||..+++++..
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~---~y~~---~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGT---PYLN---GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCC---cccC---cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 467889999999999998765 3321 111124556666666655542 43334799999999999999888754
Q ss_pred ---CCCc---eeEEEecCCchhhhhhccCCCC-CCC----------cccccc----------------------------
Q 010654 363 ---RPDL---FKAAVAAVPFVDVLTTMLDPTI-PLT----------TAEWEE---------------------------- 397 (505)
Q Consensus 363 ---~p~~---~~a~v~~~~~~d~~~~~~~~~~-~~~----------~~~~~~---------------------------- 397 (505)
.||+ +.++++..|..|+...+..-.- +.. ...|.+
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 3555 7888888888776544321000 000 000000
Q ss_pred --------c--C-----CC-----CCHHHHHHHHhCCh-hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC-C
Q 010654 398 --------W--G-----DP-----WKEEFYFYMKSYSP-VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK-T 455 (505)
Q Consensus 398 --------~--g-----~~-----~~~~~~~~~~~~sp-~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~-~ 455 (505)
+ + .+ .++.....+.+.+. ...-...+.| |+|.||..|..||+..+.++++++.++| .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVP-VLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCC-EEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 0 0 00 01111122222221 0001112566 9999999999999999999999999999 7
Q ss_pred CCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCC
Q 010654 456 DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 499 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 499 (505)
++++..++ +.+|.... .......++||...|...+.
T Consensus 252 ~V~~~~~~---~~~H~~~~-----~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 252 DVEYVRYP---GGGHLGAA-----FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CEEEEecC---CCChhhhh-----hcCcHHHHHHHHHHHCCCCC
Confidence 99888887 77895321 12233568999999966543
No 89
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.42 E-value=6.5e-12 Score=124.28 Aligned_cols=224 Identities=17% Similarity=0.164 Sum_probs=130.5
Q ss_pred CcEEEEEcCCCCcCCCCC-----------CchhH---HHHHHCCcEEEEEcccCC-CCC-chhHHHc--ccc---cCCcc
Q 010654 263 DPLLLYGYGSYEICNDPA-----------FNSSR---LSLLDRGFIFAIAQIRGG-GEL-GRQWYEN--GKF---LKKKN 321 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~-----------~~~~~---~~l~~~G~~v~~~d~rG~-~~~-g~~~~~~--~~~---~~~~~ 321 (505)
.|.||++||.+++..... |.... ..+...+|.|+.+|++|+ ++. +...... +.. .....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 589999999877654211 22211 134367999999999984 222 2110000 000 01134
Q ss_pred hHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-----------hhcc-CCC-
Q 010654 322 TFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----------TTML-DPT- 387 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-----------~~~~-~~~- 387 (505)
.++|+.+.+..+++.-.+ ++ +.++|+|+||.+++.++.++|++++.+|..++..... .... ...
T Consensus 128 ~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 567777766666655323 56 4799999999999999999999999988876532110 0000 000
Q ss_pred ----------CCC--------------C-cccc-cccCC----C---------CCHHHH------HHHHhCCh-------
Q 010654 388 ----------IPL--------------T-TAEW-EEWGD----P---------WKEEFY------FYMKSYSP------- 415 (505)
Q Consensus 388 ----------~~~--------------~-~~~~-~~~g~----~---------~~~~~~------~~~~~~sp------- 415 (505)
.+. . ...+ ..+.. + ...+.+ .+....++
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 000 0 0000 00000 0 000000 00111111
Q ss_pred ----------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHH
Q 010654 416 ----------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 479 (505)
Q Consensus 416 ----------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 479 (505)
...+.+|++| +|+++|++|..+|+..++++.+.+...+..+++++++. ++||......++.
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~P-tLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~--~~GH~~~le~p~~ 362 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKAR-FLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDS--PYGHDAFLLDDPR 362 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCC-EEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCC--CCCchhHhcCHHH
Confidence 1334677898 99999999999999999999999988777667776742 6899765555554
Q ss_pred HHHHHHHHHHHHHh
Q 010654 480 LREAAFTYTFLMRA 493 (505)
Q Consensus 480 ~~~~~~~~~fl~~~ 493 (505)
+.. .+.+||.+.
T Consensus 363 ~~~--~L~~FL~~~ 374 (379)
T PRK00175 363 YGR--LVRAFLERA 374 (379)
T ss_pred HHH--HHHHHHHhh
Confidence 433 578888774
No 90
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.41 E-value=3.3e-11 Score=121.74 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=126.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||+|++.+++ .+.+... +.....+.|||||+.|++..+.....+||++|++++. .++|+..... ....|||
T Consensus 225 ~~~i~~~dl~~g~--~~~l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~Lt~~~~~~~~~~~sp 299 (435)
T PRK05137 225 RPRVYLLDLETGQ--RELVGNF--PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-TTRLTDSPAIDTSPSYSP 299 (435)
T ss_pred CCEEEEEECCCCc--EEEeecC--CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-eEEccCCCCccCceeEcC
Confidence 4689999997753 3444332 2234578999999999998776667899999999986 8888865422 2245999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++..+ ..+||++++++ +..+ .++.... ....+.|++| .+++.....+..++++++++ ++..+.
T Consensus 300 DG~~i~f~s~~~g--~~~Iy~~d~~g-~~~~-~lt~~~~-~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~--~~~~~~ 372 (435)
T PRK05137 300 DGSQIVFESDRSG--SPQLYVMNADG-SNPR-RISFGGG-RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD--GSGERI 372 (435)
T ss_pred CCCEEEEEECCCC--CCeEEEEECCC-CCeE-EeecCCC-cccCeEECCCCCEEEEEEcCCCceEEEEEECC--CCceEe
Confidence 9999999987643 35899999876 4444 3443222 2345667765 56666655566678888875 332222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCC--ceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTP--PSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~ 213 (505)
++. . .....+++++|++.++|........ ..||++++.++.
T Consensus 373 lt~--------~-~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~ 415 (435)
T PRK05137 373 LTS--------G-FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN 415 (435)
T ss_pred ccC--------C-CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence 221 1 1233467889999999888766553 589999987665
No 91
>PLN02578 hydrolase
Probab=99.41 E-value=9.7e-12 Score=122.07 Aligned_cols=100 Identities=13% Similarity=0.051 Sum_probs=67.5
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.||++||.+++. ..|......|+ ++|.|+.+|+||.|.+...... .......+|+.+.++.+. .+
T Consensus 86 g~~vvliHG~~~~~--~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~----~~~~~~a~~l~~~i~~~~------~~ 152 (354)
T PLN02578 86 GLPIVLIHGFGASA--FHWRYNIPELA-KKYKVYALDLLGFGWSDKALIE----YDAMVWRDQVADFVKEVV------KE 152 (354)
T ss_pred CCeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCcccc----cCHHHHHHHHHHHHHHhc------cC
Confidence 35689999976543 22444445554 5799999999999876543210 000111234444444432 36
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
++.++|||+||++++.++.++|++++++|..++
T Consensus 153 ~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 153 PAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 799999999999999999999999999987654
No 92
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.40 E-value=9.3e-12 Score=115.59 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=68.3
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.||++||.+++.. .|......| .+|.|+.+|+||.|.....- ...+++..+.+..+++.. +.++
T Consensus 3 p~vvllHG~~~~~~--~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~l~~~l~~~--~~~~ 67 (242)
T PRK11126 3 PWLVFLHGLLGSGQ--DWQPVGEAL--PDYPRLYIDLPGHGGSAAIS---------VDGFADVSRLLSQTLQSY--NILP 67 (242)
T ss_pred CEEEEECCCCCChH--HHHHHHHHc--CCCCEEEecCCCCCCCCCcc---------ccCHHHHHHHHHHHHHHc--CCCC
Confidence 77999999876543 455555555 47999999999998764310 113444444444444332 2368
Q ss_pred EEEEeeChHHHHHHHHHhhCCC-ceeEEEecCCc
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPF 376 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~ 376 (505)
+.++|||+||.+++.++.++|+ ++++++..++.
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999999999998865 48888876543
No 93
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.39 E-value=1.1e-11 Score=116.91 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=74.8
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
++.|.||++||..+.. ..|......|.++||.|+.+|+||+|..... ......+++..+.+..+++.-. .
T Consensus 16 ~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-------~~~~~~~~~~~~~l~~~i~~l~-~ 85 (273)
T PLN02211 16 RQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-------ADSVTTFDEYNKPLIDFLSSLP-E 85 (273)
T ss_pred CCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-------cccCCCHHHHHHHHHHHHHhcC-C
Confidence 4568999999976543 3466666778888999999999998753211 1111344554444444333311 1
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.+++.++||||||.++..++.++|++++++|..++.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 368999999999999999998899999998887553
No 94
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.39 E-value=2.3e-12 Score=116.11 Aligned_cols=168 Identities=21% Similarity=0.197 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh---ccCC--CCCCCcc---c
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---MLDP--TIPLTTA---E 394 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~---~~~~--~~~~~~~---~ 394 (505)
++-+..|++||.+++.+++++|+|+|.|.||-+++.+++..| .++|+|+.+|-.-.... .... .+|.... .
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 456789999999999999999999999999999999999988 78999988774321110 0000 0110000 0
Q ss_pred c--cccCCCCCHHHHHHHH---hCChhhcccCCCCCeEEEEccCCCCCCCCCh-HHHHHHHHHhcCCC--CCeEEEEecC
Q 010654 395 W--EEWGDPWKEEFYFYMK---SYSPVDNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLREMKTD--DNILLFKCEL 466 (505)
Q Consensus 395 ~--~~~g~~~~~~~~~~~~---~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~-~~~~~~~L~~~~~~--~~~~~~~~~~ 466 (505)
. ...+.......+.... .....-.+.++++| +|+++|++|...|... +.++.++|++++.+ ++.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~p-iLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~--- 157 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGP-ILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYP--- 157 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SE-EEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEET---
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCC-EEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcC---
Confidence 0 0000000000000000 00111125566887 9999999999998666 44677789988876 6777788
Q ss_pred CCCCCCCCC-----h---------------------HHHHHHHHHHHHHHHHhhC
Q 010654 467 GAGHFSKSG-----R---------------------FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 467 ~~gH~~~~~-----~---------------------~~~~~~~~~~~~fl~~~l~ 495 (505)
++||.+..+ . ..+.+.+..+++||.++|+
T Consensus 158 ~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 158 GAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp TB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 889964211 0 0234556678999999986
No 95
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.39 E-value=4.1e-11 Score=119.95 Aligned_cols=188 Identities=15% Similarity=0.132 Sum_probs=123.2
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEE--eCCCCC--ceeeeeccccce--e
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL--DVSKPE--ELRVLTPRVVGV--D 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~--d~~~~~--~~~~l~~~~~~~--~ 80 (505)
..+||++++.+++ .+.|...+. ....++|||||++|+|........++|+. +++++. +.+.++....+. .
T Consensus 210 ~~~I~~~~l~~g~--~~~lt~~~g--~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~ 285 (428)
T PRK01029 210 VPKIFLGSLENPA--GKKILALQG--NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGN 285 (428)
T ss_pred CceEEEEECCCCC--ceEeecCCC--CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCC
Confidence 3579999998753 445544322 34468999999999998866556678775 555421 367777543222 3
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC-CCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNT-SETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
..|||||++|+|.++.++ ..+||++++.+. +..+ .++.... ....+.|++| .++++...++..+++++++.+
T Consensus 286 p~wSPDG~~Laf~s~~~g--~~~ly~~~~~~~g~~~~-~lt~~~~-~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~- 360 (428)
T PRK01029 286 PSFSPDGTRLVFVSNKDG--RPRIYIMQIDPEGQSPR-LLTKKYR-NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT- 360 (428)
T ss_pred eEECCCCCEEEEEECCCC--CceEEEEECcccccceE-EeccCCC-CccceeECCCCCEEEEEEcCCCCcEEEEEECCC-
Confidence 459999999999987643 358999988532 2233 4554432 2446778776 577777667777899998863
Q ss_pred CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 158 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+..++|+.. ......+.+++|++.++|..... ....+|++++.+++
T Consensus 361 -g~~~~Lt~~--------~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl~~g~ 406 (428)
T PRK01029 361 -GRDYQLTTS--------PENKESPSWAIDSLHLVYSAGNS-NESELYLISLITKK 406 (428)
T ss_pred -CCeEEccCC--------CCCccceEECCCCCEEEEEECCC-CCceEEEEECCCCC
Confidence 334444321 11123356789999888876643 34689999988776
No 96
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.37 E-value=1.9e-11 Score=119.55 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=106.4
Q ss_pred HHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHhhCCC
Q 010654 287 SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 287 ~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~~~~p~ 365 (505)
.|...+|.|+.+|+||+|+... . ...+.|..+.+..+++.-.+ ++ +.++|+||||++++.++.++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~-------~---~~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~ 161 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLD-------V---PIDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPA 161 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCC-------C---CCCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChH
Confidence 3545689999999999765311 0 11233444333333333222 34 4799999999999999999999
Q ss_pred ceeEEEecCCchh-------hhh---hc--cCCC--CC--------------C-Ccccc-cccCCC-C------CHHHH-
Q 010654 366 LFKAAVAAVPFVD-------VLT---TM--LDPT--IP--------------L-TTAEW-EEWGDP-W------KEEFY- 407 (505)
Q Consensus 366 ~~~a~v~~~~~~d-------~~~---~~--~~~~--~~--------------~-~~~~~-~~~g~~-~------~~~~~- 407 (505)
+++.+|..++... +.. .. .... .. . ....+ ..+... . .....
T Consensus 162 ~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T PRK08775 162 RVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAED 241 (343)
T ss_pred hhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHH
Confidence 9999998865421 100 00 0000 00 0 00000 001100 0 00000
Q ss_pred -------HHHHhCCh-------------hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 408 -------FYMKSYSP-------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 408 -------~~~~~~sp-------------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
......++ ...+.++++| +|+++|+.|..+|+.++.++++.+.. ..++++++. +
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~P-tLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~--~ 315 (343)
T PRK08775 242 YLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVP-TVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRS--P 315 (343)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCC-eEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeC--C
Confidence 01111111 0124577888 99999999999999888888776632 356778871 3
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 468 AGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 468 ~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
+||....+.++.+.. .+.+||.+.
T Consensus 316 aGH~~~lE~Pe~~~~--~l~~FL~~~ 339 (343)
T PRK08775 316 YGHDAFLKETDRIDA--ILTTALRST 339 (343)
T ss_pred ccHHHHhcCHHHHHH--HHHHHHHhc
Confidence 799776556665544 467888653
No 97
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.36 E-value=1.3e-10 Score=117.49 Aligned_cols=187 Identities=11% Similarity=0.040 Sum_probs=125.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+..+||++|..+. ..+.+... ......++|||||++|+|.+.......||++|++++. .++++...... ...||
T Consensus 180 ~~~~l~~~d~dg~--~~~~lt~~--~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~-~~~l~~~~g~~~~~~~S 254 (435)
T PRK05137 180 RIKRLAIMDQDGA--NVRYLTDG--SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ-RELVGNFPGMTFAPRFS 254 (435)
T ss_pred cceEEEEECCCCC--CcEEEecC--CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc-EEEeecCCCcccCcEEC
Confidence 4678999998443 33445432 3356689999999999998766667899999999986 77776544222 23599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ +.+||++|+++ +..+ .++.... ......|++| .++|....++..++++++++ ++..+
T Consensus 255 PDG~~la~~~~~~g--~~~Iy~~d~~~-~~~~-~Lt~~~~-~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~--g~~~~ 327 (435)
T PRK05137 255 PDGRKVVMSLSQGG--NTDIYTMDLRS-GTTT-RLTDSPA-IDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD--GSNPR 327 (435)
T ss_pred CCCCEEEEEEecCC--CceEEEEECCC-CceE-EccCCCC-ccCceeEcCCCCEEEEEECCCCCCeEEEEECC--CCCeE
Confidence 99999999876543 46899999986 4444 4554433 2335677765 57777777777889888875 44333
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+|+ .... ....+.+++|++.+++...... -..++++++.++.
T Consensus 328 ~lt------~~~~--~~~~~~~SpdG~~ia~~~~~~~-~~~i~~~d~~~~~ 369 (435)
T PRK05137 328 RIS------FGGG--RYSTPVWSPRGDLIAFTKQGGG-QFSIGVMKPDGSG 369 (435)
T ss_pred Eee------cCCC--cccCeEECCCCCEEEEEEcCCC-ceEEEEEECCCCc
Confidence 332 1111 1223467899999888764322 2478888876554
No 98
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.35 E-value=2.7e-10 Score=114.95 Aligned_cols=187 Identities=14% Similarity=0.080 Sum_probs=124.6
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s 84 (505)
+.++||+.|.... ..+.++.. ......+.|||||++|+|.+......+||++|+++++ .++++..... ....||
T Consensus 196 ~~~~l~i~d~dG~--~~~~l~~~--~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~-~~~lt~~~g~~~~~~wS 270 (448)
T PRK04792 196 YPYQLMIADYDGY--NEQMLLRS--PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV-REKVTSFPGINGAPRFS 270 (448)
T ss_pred CceEEEEEeCCCC--CceEeecC--CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC-eEEecCCCCCcCCeeEC
Confidence 4578999987432 23455543 3345578999999999998776667899999999986 6777643322 234599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ +.+||++|+++ +..+ .++.... ....+.|++| .+++....++..+++++++. ++..+
T Consensus 271 PDG~~La~~~~~~g--~~~Iy~~dl~t-g~~~-~lt~~~~-~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~--~g~~~ 343 (448)
T PRK04792 271 PDGKKLALVLSKDG--QPEIYVVDIAT-KALT-RITRHRA-IDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA--SGKVS 343 (448)
T ss_pred CCCCEEEEEEeCCC--CeEEEEEECCC-CCeE-ECccCCC-CccceEECCCCCEEEEEECCCCCceEEEEECC--CCCEE
Confidence 99999999876543 36899999986 4433 4444332 2345677765 67777777777788888875 33333
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.| ++.. .+. ....+++|++.++|.... .....|+++++.+++
T Consensus 344 ~L------t~~g-~~~-~~~~~SpDG~~l~~~~~~-~g~~~I~~~dl~~g~ 385 (448)
T PRK04792 344 RL------TFEG-EQN-LGGSITPDGRSMIMVNRT-NGKFNIARQDLETGA 385 (448)
T ss_pred EE------ecCC-CCC-cCeeECCCCCEEEEEEec-CCceEEEEEECCCCC
Confidence 22 2211 111 224678899988886543 233478999998876
No 99
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.34 E-value=4.7e-11 Score=101.71 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=136.7
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 311 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~ 311 (505)
....+.++...+.++-+.+. ..+...++|++||.-...........+..+.+.||.++..|++|.|++...|.
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh-------~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~ 81 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLH-------ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY 81 (269)
T ss_pred eeeEEEeccCCCchhhccee-------ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc
Confidence 33445555555555544221 12456899999986433222112223457778899999999999998877664
Q ss_pred HcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCC
Q 010654 312 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLT 391 (505)
Q Consensus 312 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 391 (505)
. -.+....+|+..+++++.....+ --.|.|||-||..++..+.++.+ ..-++..+|-+|....... .+.-.
T Consensus 82 ~----Gn~~~eadDL~sV~q~~s~~nr~---v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~e-Rlg~~ 152 (269)
T KOG4667|consen 82 Y----GNYNTEADDLHSVIQYFSNSNRV---VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINE-RLGED 152 (269)
T ss_pred c----CcccchHHHHHHHHHHhccCceE---EEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhh-hhccc
Confidence 2 23335569999999999874321 23589999999999999999876 6777888887776544311 11000
Q ss_pred cccc-c-----c-------cCCCCCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC
Q 010654 392 TAEW-E-----E-------WGDPWKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 456 (505)
Q Consensus 392 ~~~~-~-----~-------~g~~~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~ 456 (505)
-.+| . . |+.-..++....-...+-.....+| +|| ||-+||..|.+||.+.+.+|++.+..
T Consensus 153 ~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~-VLTvhGs~D~IVPve~AkefAk~i~n---- 227 (269)
T KOG4667|consen 153 YLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCR-VLTVHGSEDEIVPVEDAKEFAKIIPN---- 227 (269)
T ss_pred HHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCc-eEEEeccCCceeechhHHHHHHhccC----
Confidence 0011 1 1 1111112211100111111112223 787 99999999999999999999988875
Q ss_pred CCeEEEEecCCCCCCCCCC
Q 010654 457 DNILLFKCELGAGHFSKSG 475 (505)
Q Consensus 457 ~~~~~~~~~~~~gH~~~~~ 475 (505)
..+.+.+ |+.|.+...
T Consensus 228 H~L~iIE---gADHnyt~~ 243 (269)
T KOG4667|consen 228 HKLEIIE---GADHNYTGH 243 (269)
T ss_pred CceEEec---CCCcCccch
Confidence 4677787 899987543
No 100
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=4.9e-10 Score=112.73 Aligned_cols=187 Identities=15% Similarity=0.112 Sum_probs=121.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+..+||++|... ...+.+... ......++|||||++|+|.+.......||++|+++++ .++++...... ...||
T Consensus 174 ~~~~L~~~D~dG--~~~~~l~~~--~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~-~~~l~~~~g~~~~~~~S 248 (427)
T PRK02889 174 NRYQLQISDADG--QNAQSALSS--PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR-RRVVANFKGSNSAPAWS 248 (427)
T ss_pred CccEEEEECCCC--CCceEeccC--CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC-EEEeecCCCCccceEEC
Confidence 356799999733 223444432 2234578999999999998766566789999999986 67776433222 24599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ ..+||.+++.+ +..+ .++.... ....+.|++| .+++.....+..+++.++++ ++..+
T Consensus 249 PDG~~la~~~~~~g--~~~Iy~~d~~~-~~~~-~lt~~~~-~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~--~g~~~ 321 (427)
T PRK02889 249 PDGRTLAVALSRDG--NSQIYTVNADG-SGLR-RLTQSSG-IDTEPFFSPDGRSIYFTSDRGGAPQIYRMPAS--GGAAQ 321 (427)
T ss_pred CCCCEEEEEEccCC--CceEEEEECCC-CCcE-ECCCCCC-CCcCeEEcCCCCEEEEEecCCCCcEEEEEECC--CCceE
Confidence 99999999876543 36999999876 4333 4554332 2335677776 57777666677777777765 33222
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+ +.+.. .+. ..+.+++||+.+++..... ...+++++++.+++
T Consensus 322 ~------lt~~g-~~~-~~~~~SpDG~~Ia~~s~~~-g~~~I~v~d~~~g~ 363 (427)
T PRK02889 322 R------VTFTG-SYN-TSPRISPDGKLLAYISRVG-GAFKLYVQDLATGQ 363 (427)
T ss_pred E------EecCC-CCc-CceEECCCCCEEEEEEccC-CcEEEEEEECCCCC
Confidence 2 22221 111 2246789999888765432 23479999988776
No 101
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=3.3e-10 Score=114.01 Aligned_cols=183 Identities=14% Similarity=0.104 Sum_probs=121.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.++. .+.+... +.....+.|||||+.|++..+.....+||.+|++++. .++++..... ....|||
T Consensus 219 ~~~I~~~dl~~g~--~~~l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSp 293 (427)
T PRK02889 219 KPVVYVHDLATGR--RRVVANF--KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSP 293 (427)
T ss_pred CcEEEEEECCCCC--EEEeecC--CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcC
Confidence 3569999998753 3444322 2344578999999999998776677899999999886 7888764322 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||.+++++ +..+ .++.... ......|++| .+++....++..++++++++. +..+.
T Consensus 294 DG~~l~f~s~~~g--~~~Iy~~~~~~-g~~~-~lt~~g~-~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~--g~~~~ 366 (427)
T PRK02889 294 DGRSIYFTSDRGG--APQIYRMPASG-GAAQ-RVTFTGS-YNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT--GQVTA 366 (427)
T ss_pred CCCEEEEEecCCC--CcEEEEEECCC-CceE-EEecCCC-CcCceEECCCCCEEEEEEccCCcEEEEEEECCC--CCeEE
Confidence 9999999987643 35899999876 4333 2332222 1234567665 567666666667889998764 22333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
|+.+ .. ...+.+++|++.++|....... ..++.++..+
T Consensus 367 lt~~--------~~-~~~p~~spdg~~l~~~~~~~g~-~~l~~~~~~g 404 (427)
T PRK02889 367 LTDT--------TR-DESPSFAPNGRYILYATQQGGR-SVLAAVSSDG 404 (427)
T ss_pred ccCC--------CC-ccCceECCCCCEEEEEEecCCC-EEEEEEECCC
Confidence 3211 11 1235788999998888775543 5688888754
No 102
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=4.3e-10 Score=113.74 Aligned_cols=187 Identities=13% Similarity=0.046 Sum_probs=124.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+.++||+.|.... ..+.++.. ......+.|||||++|+|.+......+||++|++++. .+.++...... ...||
T Consensus 177 ~~~~l~~~d~~g~--~~~~l~~~--~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~-~~~l~~~~g~~~~~~~S 251 (430)
T PRK00178 177 TRYTLQRSDYDGA--RAVTLLQS--REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR-REQITNFEGLNGAPAWS 251 (430)
T ss_pred cceEEEEECCCCC--CceEEecC--CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC-EEEccCCCCCcCCeEEC
Confidence 3557888888543 33445543 2345688999999999998766567799999999986 77776433222 24599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ ..+||++|+++ +..+ .++.... ....+.|++| .+++....++..+++++++.. +..+
T Consensus 252 pDG~~la~~~~~~g--~~~Iy~~d~~~-~~~~-~lt~~~~-~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~--g~~~ 324 (430)
T PRK00178 252 PDGSKLAFVLSKDG--NPEIYVMDLAS-RQLS-RVTNHPA-IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG--GRAE 324 (430)
T ss_pred CCCCEEEEEEccCC--CceEEEEECCC-CCeE-EcccCCC-CcCCeEECCCCCEEEEEECCCCCceEEEEECCC--CCEE
Confidence 99999999876543 36899999986 4433 4554332 2335677765 678877777778888888753 3233
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++ .+.. .+ ...+.++++++.++|..... ....|+++++.+++
T Consensus 325 ~l------t~~~-~~-~~~~~~Spdg~~i~~~~~~~-~~~~l~~~dl~tg~ 366 (430)
T PRK00178 325 RV------TFVG-NY-NARPRLSADGKTLVMVHRQD-GNFHVAAQDLQRGS 366 (430)
T ss_pred Ee------ecCC-CC-ccceEECCCCCEEEEEEccC-CceEEEEEECCCCC
Confidence 22 2111 11 11245688999888876543 24469999998876
No 103
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.31 E-value=3.4e-11 Score=117.98 Aligned_cols=225 Identities=17% Similarity=0.109 Sum_probs=129.3
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 319 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 319 (505)
+.+|.++... ..+ .+..|.||++||.+.... .|......|+ .+|.|+.+|+||.|....... ....
T Consensus 111 ~~~~~~~~y~---~~G----~~~~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~----~~~~ 176 (383)
T PLN03084 111 SSDLFRWFCV---ESG----SNNNPPVLLIHGFPSQAY--SYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQP----GYGF 176 (383)
T ss_pred cCCceEEEEE---ecC----CCCCCeEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEECCCCCCCCCCCcc----cccc
Confidence 4577666432 222 123588999999875433 3555555665 589999999999986543210 0011
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhh-----hh---c----cC--
Q 010654 320 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----TT---M----LD-- 385 (505)
Q Consensus 320 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~-----~~---~----~~-- 385 (505)
...++++...+..++++-. .+++.++|+|+||.+++.++.++|++++.+|..++..... .. + ..
T Consensus 177 ~ys~~~~a~~l~~~i~~l~--~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~ 254 (383)
T PLN03084 177 NYTLDEYVSSLESLIDELK--SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEI 254 (383)
T ss_pred cCCHHHHHHHHHHHHHHhC--CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhh
Confidence 2345555555555444422 3579999999999999999999999999999887653210 00 0 00
Q ss_pred -CCCCC---------------CcccccccCC----CC-CHHH----HHHHHhC-Ch----hh---cccCCCCCeEEEEcc
Q 010654 386 -PTIPL---------------TTAEWEEWGD----PW-KEEF----YFYMKSY-SP----VD---NVKAQNYPHILVTAG 432 (505)
Q Consensus 386 -~~~~~---------------~~~~~~~~g~----~~-~~~~----~~~~~~~-sp----~~---~~~~~~~Pp~Li~~G 432 (505)
...+. .......+.. +. .... +..+... .. +. ...+++.| +|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vP-vLiI~G 333 (383)
T PLN03084 255 FSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTP-ITVCWG 333 (383)
T ss_pred hhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCC-EEEEee
Confidence 00000 0000000101 10 0000 1111110 00 01 01346887 999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 433 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 433 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+.|..++...++++++.. +.++++++ ++||....+.++.+.. .+.+|+.
T Consensus 334 ~~D~~v~~~~~~~~a~~~-----~a~l~vIp---~aGH~~~~E~Pe~v~~--~I~~Fl~ 382 (383)
T PLN03084 334 LRDRWLNYDGVEDFCKSS-----QHKLIELP---MAGHHVQEDCGEELGG--IISGILS 382 (383)
T ss_pred CCCCCcCHHHHHHHHHhc-----CCeEEEEC---CCCCCcchhCHHHHHH--HHHHHhh
Confidence 999999987777666542 45677888 8899887766665444 4666764
No 104
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.31 E-value=5.2e-11 Score=102.54 Aligned_cols=164 Identities=18% Similarity=0.240 Sum_probs=116.1
Q ss_pred HHHHHHCCcEEEEEcc-cC---CCCCc----hhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHH
Q 010654 285 RLSLLDRGFIFAIAQI-RG---GGELG----RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLI 356 (505)
Q Consensus 285 ~~~l~~~G~~v~~~d~-rG---~~~~g----~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~ 356 (505)
...++..||.|++||+ || +.+.. ..|. .+...+....|+.+.++||..++ +..+||++|+.+||-.+
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~---~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~v 134 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWM---KGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVV 134 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHH---hcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEE
Confidence 3467778999999997 45 22211 1233 23444567899999999999776 45899999999999988
Q ss_pred HHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCC
Q 010654 357 GAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP 436 (505)
Q Consensus 357 ~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~ 436 (505)
..+....| .|.++++..|..- +.+ .+.++++| +|++.|+.|.
T Consensus 135 v~~~~~~~-~f~a~v~~hps~~------------------------d~~------------D~~~vk~P-ilfl~ae~D~ 176 (242)
T KOG3043|consen 135 VTLSAKDP-EFDAGVSFHPSFV------------------------DSA------------DIANVKAP-ILFLFAELDE 176 (242)
T ss_pred EEeeccch-hheeeeEecCCcC------------------------Chh------------HHhcCCCC-EEEEeecccc
Confidence 88877666 7888887766210 111 12344576 9999999999
Q ss_pred CCCCChHHHHHHHHHhcCC-CCCeEEEEecCCCCCCCCC---------ChHHHHHHHHHHHHHHHHhh
Q 010654 437 RVMYSEPAKFVAKLREMKT-DDNILLFKCELGAGHFSKS---------GRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 437 ~vp~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~gH~~~~---------~~~~~~~~~~~~~~fl~~~l 494 (505)
.+|+....++-++|+.... ..++.+|+ +.+|++.. ++...-+.+.++..||.+++
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~~~v~~f~---g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVGSQVKTFS---GVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccceeEEEcC---CccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987653 24577888 78997631 11222333666789999886
No 105
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.30 E-value=2.8e-10 Score=114.38 Aligned_cols=184 Identities=11% Similarity=0.070 Sum_probs=121.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~d 86 (505)
.+||++++.+++ .+.+... +.....+.|||||++|++........+||++|++++. .++++..... ....||||
T Consensus 223 ~~i~i~dl~~G~--~~~l~~~--~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~-~~~lt~~~~~~~~~~wSPD 297 (429)
T PRK03629 223 SALVIQTLANGA--VRQVASF--PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPD 297 (429)
T ss_pred cEEEEEECCCCC--eEEccCC--CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEccCCCCCcCceEECCC
Confidence 579999997653 3444432 2234468999999999998766556789999999986 8888765422 23459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
|++|+|.+++++ ..+||.+++++ +..+ .++.... ....+.|++| .+++....++...+++++++. +..+.|
T Consensus 298 G~~I~f~s~~~g--~~~Iy~~d~~~-g~~~-~lt~~~~-~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~--g~~~~L 370 (429)
T PRK03629 298 SQNLAYTSDQAG--RPQVYKVNING-GAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQVL 370 (429)
T ss_pred CCEEEEEeCCCC--CceEEEEECCC-CCeE-EeecCCC-CccCEEECCCCCEEEEEEccCCCceEEEEECCC--CCeEEe
Confidence 999999997643 35999999986 4444 3333222 2345667765 566666666767788888763 333333
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+. . .....+++++||+.+++....- ....++++++.++.
T Consensus 371 t~--------~-~~~~~p~~SpDG~~i~~~s~~~-~~~~l~~~~~~G~~ 409 (429)
T PRK03629 371 TD--------T-FLDETPSIAPNGTMVIYSSSQG-MGSVLNLVSTDGRF 409 (429)
T ss_pred CC--------C-CCCCCceECCCCCEEEEEEcCC-CceEEEEEECCCCC
Confidence 31 1 1112356789999888776642 23467888875443
No 106
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=3.6e-10 Score=114.24 Aligned_cols=185 Identities=9% Similarity=0.100 Sum_probs=120.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.++. .+.+... ......+.|||||++|+|..+.....+||++|++++. .+.++..... ....|||
T Consensus 222 ~~~l~~~~l~~g~--~~~l~~~--~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~~sp 296 (430)
T PRK00178 222 RPRIFVQNLDTGR--REQITNF--EGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ-LSRVTNHPAIDTEPFWGK 296 (430)
T ss_pred CCEEEEEECCCCC--EEEccCC--CCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC-eEEcccCCCCcCCeEECC
Confidence 3579999997753 3444432 2234468999999999998776667899999999986 7888754422 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||.+++.+ +..+ .++.... ......|++| .+++....++..+++++++.+ +..+.
T Consensus 297 Dg~~i~f~s~~~g--~~~iy~~d~~~-g~~~-~lt~~~~-~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t--g~~~~ 369 (430)
T PRK00178 297 DGRTLYFTSDRGG--KPQIYKVNVNG-GRAE-RVTFVGN-YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR--GSVRI 369 (430)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCEE-EeecCCC-CccceEECCCCCEEEEEEccCCceEEEEEECCC--CCEEE
Confidence 9999999987643 35899999876 4443 2332211 1224456654 677776666666788888763 32333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
|+.. ... ..+.+++|++.++|....... ..++.++..++.
T Consensus 370 lt~~--------~~~-~~p~~spdg~~i~~~~~~~g~-~~l~~~~~~g~~ 409 (430)
T PRK00178 370 LTDT--------SLD-ESPSVAPNGTMLIYATRQQGR-GVLMLVSINGRV 409 (430)
T ss_pred ccCC--------CCC-CCceECCCCCEEEEEEecCCc-eEEEEEECCCCc
Confidence 3321 111 124678999988887664332 468888875443
No 107
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.29 E-value=1.5e-10 Score=114.21 Aligned_cols=184 Identities=13% Similarity=0.082 Sum_probs=121.1
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEe
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAA 83 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~ 83 (505)
.++.++|++++.++.. ..+... +.....++|||||++|+|...+....+||++|++++. .+.|+....- ...+|
T Consensus 215 ~~~~~i~~~~l~~g~~--~~i~~~--~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~ 289 (425)
T COG0823 215 GGCPRIYYLDLNTGKR--PVILNF--NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSW 289 (425)
T ss_pred CCCceEEEEeccCCcc--ceeecc--CCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccC
Confidence 3447899999988754 333331 3345578999999999999988899999999999987 6667765422 23459
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
||||++|+|.+++++.+ +||++++++ +..+ .++......- ...|++| .+++.....|...+.++++..++. .
T Consensus 290 spdG~~ivf~Sdr~G~p--~I~~~~~~g-~~~~-riT~~~~~~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~-~ 363 (425)
T COG0823 290 SPDGSKIVFTSDRGGRP--QIYLYDLEG-SQVT-RLTFSGGGNS-NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK-I 363 (425)
T ss_pred CCCCCEEEEEeCCCCCc--ceEEECCCC-Ccee-EeeccCCCCc-CccCCCCCCEEEEEeccCCceeeEEeccCCCCc-E
Confidence 99999999999986654 999999987 3334 3443332211 4445554 666666445656677777654222 3
Q ss_pred cccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEEC
Q 010654 162 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 209 (505)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 209 (505)
+.|+.. +.....+++++++.+.|..... .-+.++.++.
T Consensus 364 ~~lt~~---------~~~e~ps~~~ng~~i~~~s~~~-~~~~l~~~s~ 401 (425)
T COG0823 364 RILTST---------YLNESPSWAPNGRMIMFSSGQG-GGSVLSLVSL 401 (425)
T ss_pred EEcccc---------ccCCCCCcCCCCceEEEeccCC-CCceEEEeec
Confidence 333221 1122356778888887777766 3344555554
No 108
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.29 E-value=3.9e-10 Score=111.42 Aligned_cols=203 Identities=15% Similarity=0.100 Sum_probs=123.6
Q ss_pred EEEEEEECC-CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc----EEEEEcccCCCCCc
Q 010654 233 TERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF----IFAIAQIRGGGELG 307 (505)
Q Consensus 233 ~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~----~v~~~d~rG~~~~g 307 (505)
.+.+++.|. -|....++++.|+++ . .+++|+|+++||........ .......|.+.|. +|+.+|........
T Consensus 180 ~~~~~~~S~~Lg~~r~v~VY~P~~y-~-~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~ 256 (411)
T PRK10439 180 AKEIIWKSERLGNSRRVWIYTTGDA-A-PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRS 256 (411)
T ss_pred eEEEEEEccccCCceEEEEEECCCC-C-CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCccccc
Confidence 345555553 466778899999987 4 56899999999976543222 1223346666664 46777753221111
Q ss_pred hhHHHcccccCCcchHHH-HH-HHHHHHHHc--CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc
Q 010654 308 RQWYENGKFLKKKNTFTD-FI-ACAEYLIKN--CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 383 (505)
Q Consensus 308 ~~~~~~~~~~~~~~~~~D-~~-~~~~~l~~~--~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 383 (505)
.+. . ....+.+ +. +.+-++.++ -..|+++.+|+|.||||+.++.++.++|++|.++++.+|-+-+..
T Consensus 257 ~el------~-~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~-- 327 (411)
T PRK10439 257 QEL------P-CNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH-- 327 (411)
T ss_pred ccC------C-chHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC--
Confidence 110 0 0112222 21 233444444 235888999999999999999999999999999999998532110
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 384 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 384 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
.. +. ......+.+.+. .....+. .++|.+|..|... ...++++++.|+++|.++++..++
T Consensus 328 ---~~----------~~-~~~~l~~~l~~~----~~~~~~l-r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~ 387 (411)
T PRK10439 328 ---RG----------GQ-QEGVLLEQLKAG----EVSARGL-RIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVD 387 (411)
T ss_pred ---cc----------CC-chhHHHHHHHhc----ccCCCCc-eEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECC
Confidence 00 00 001111122210 0111122 4899999988544 467899999999999998777775
Q ss_pred ecCCCCCC
Q 010654 464 CELGAGHF 471 (505)
Q Consensus 464 ~~~~~gH~ 471 (505)
| ||.
T Consensus 388 ---G-GHd 391 (411)
T PRK10439 388 ---G-GHD 391 (411)
T ss_pred ---C-CcC
Confidence 4 784
No 109
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=5.4e-10 Score=112.84 Aligned_cols=184 Identities=8% Similarity=0.066 Sum_probs=119.9
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.+++ .+.+... +.....+.|||||++|++......+.+||++|+++++ .+.++..... ....|||
T Consensus 241 ~~~L~~~dl~tg~--~~~lt~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~-~~~lt~~~~~~~~p~wSp 315 (448)
T PRK04792 241 KAEIFVQDIYTQV--REKVTSF--PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA-LTRITRHRAIDTEPSWHP 315 (448)
T ss_pred CcEEEEEECCCCC--eEEecCC--CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC-eEECccCCCCccceEECC
Confidence 4679999997753 3444432 2233468999999999998766667899999999986 8888764322 2245999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||++++++ +..+ .++..... .....|++| .+++....++..+++++++.. +..+.
T Consensus 316 DG~~I~f~s~~~g--~~~Iy~~dl~~-g~~~-~Lt~~g~~-~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~--g~~~~ 388 (448)
T PRK04792 316 DGKSLIFTSERGG--KPQIYRVNLAS-GKVS-RLTFEGEQ-NLGGSITPDGRSMIMVNRTNGKFNIARQDLET--GAMQV 388 (448)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCEE-EEecCCCC-CcCeeECCCCCEEEEEEecCCceEEEEEECCC--CCeEE
Confidence 9999999987643 35999999986 4444 33322221 123456655 677766666666788888753 33333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCC
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
|+.. ... ..+++++|++.++|...... -..++.++..++
T Consensus 389 lt~~--------~~d-~~ps~spdG~~I~~~~~~~g-~~~l~~~~~~G~ 427 (448)
T PRK04792 389 LTST--------RLD-ESPSVAPNGTMVIYSTTYQG-KQVLAAVSIDGR 427 (448)
T ss_pred ccCC--------CCC-CCceECCCCCEEEEEEecCC-ceEEEEEECCCC
Confidence 3321 111 12467889998888776432 346888887543
No 110
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.28 E-value=4e-12 Score=118.80 Aligned_cols=205 Identities=18% Similarity=0.263 Sum_probs=120.1
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCC----cEEEEEcccCCCCCchhHHHc-----
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGRQWYEN----- 313 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G----~~v~~~d~rG~~~~g~~~~~~----- 313 (505)
|..+..+++.|+++ ...+++|+|+++||................+.+.| .+++.++.-+.......|...
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 56788899999998 77889999999999511000000111122344443 455555554443222222210
Q ss_pred -ccccCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCC
Q 010654 314 -GKFLKKKNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 390 (505)
Q Consensus 314 -~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 390 (505)
.....+...+.+.. +.+.++.++-.+++++.+|+|+|+||+.++.++.++|+.|.++++.+|..+....+
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~------- 156 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSL------- 156 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCH-------
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccc-------
Confidence 01112223344433 46667777766777779999999999999999999999999999999987653111
Q ss_pred CcccccccCCCCCHHHHHHHHhCChhhcc-----cCCCCCeEEEEccCCCCCCCC----------ChHHHHHHHHHhcCC
Q 010654 391 TTAEWEEWGDPWKEEFYFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMY----------SEPAKFVAKLREMKT 455 (505)
Q Consensus 391 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~-----~~~~~Pp~Li~~G~~D~~vp~----------~~~~~~~~~L~~~~~ 455 (505)
|.. .... .+ ...++...+ ..... ++++..|+.|..... ....++.+.|+..+.
T Consensus 157 ----w~~---~~~~-~~---~~~~~~~~~~~~~~~~~~~-~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 224 (251)
T PF00756_consen 157 ----WGP---SDDE-AW---KENDPFDLIKALSQKKKPL-RIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGI 224 (251)
T ss_dssp ----HHH---STCG-HH---GGCHHHHHHHHHHHTTSEE-EEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEEC
T ss_pred ----cCc---CCcH-Hh---hhccHHHHhhhhhcccCCC-eEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCC
Confidence 100 0000 00 111121111 11123 589999999984432 234445556667788
Q ss_pred CCCeEEEEecCCCCCC
Q 010654 456 DDNILLFKCELGAGHF 471 (505)
Q Consensus 456 ~~~~~~~~~~~~~gH~ 471 (505)
+..+..++ ++|.
T Consensus 225 ~~~~~~~~----G~H~ 236 (251)
T PF00756_consen 225 PHTYHVFP----GGHD 236 (251)
T ss_dssp TTESEEEH----SESS
T ss_pred CceEEEec----Cccc
Confidence 88888886 4784
No 111
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=5.5e-10 Score=112.71 Aligned_cols=185 Identities=10% Similarity=0.106 Sum_probs=122.3
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||++++.++. .+.+... +.....++|||||++|++..+.....+||++|++++. .+.++..... ....|||
T Consensus 227 ~~~l~~~dl~~g~--~~~l~~~--~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~sp 301 (433)
T PRK04922 227 RSAIYVQDLATGQ--RELVASF--RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ-LTRLTNHFGIDTEPTWAP 301 (433)
T ss_pred CcEEEEEECCCCC--EEEeccC--CCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC-eEECccCCCCccceEECC
Confidence 4679999997653 3444432 2234468999999999988766667899999999986 7888755322 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++..+ ..+||.+++++ +..+ .++.... ....+.|++| .+++....++..+++++++.. +..+.
T Consensus 302 DG~~l~f~sd~~g--~~~iy~~dl~~-g~~~-~lt~~g~-~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~--g~~~~ 374 (433)
T PRK04922 302 DGKSIYFTSDRGG--RPQIYRVAASG-GSAE-RLTFQGN-YNARASVSPDGKKIAMVHGSGGQYRIAVMDLST--GSVRT 374 (433)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCeE-EeecCCC-CccCEEECCCCCEEEEEECCCCceeEEEEECCC--CCeEE
Confidence 9999999987643 25899999876 4443 3332222 1235677765 566665555666788998753 33333
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
|+.+. . ...+.+++|++.++|..... .-..||.+++.++.
T Consensus 375 Lt~~~--------~-~~~p~~spdG~~i~~~s~~~-g~~~L~~~~~~g~~ 414 (433)
T PRK04922 375 LTPGS--------L-DESPSFAPNGSMVLYATREG-GRGVLAAVSTDGRV 414 (433)
T ss_pred CCCCC--------C-CCCceECCCCCEEEEEEecC-CceEEEEEECCCCc
Confidence 33211 1 12356789999888877653 33578988886543
No 112
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=9.3e-10 Score=111.06 Aligned_cols=187 Identities=13% Similarity=0.059 Sum_probs=122.8
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
+.++||++|.... ....+... ......++|||||++|+|.+.......||++|++++. .+.++...... ...||
T Consensus 182 ~~~~l~i~D~~g~--~~~~lt~~--~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~-~~~l~~~~g~~~~~~~S 256 (433)
T PRK04922 182 MRYALQVADSDGY--NPQTILRS--AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ-RELVASFRGINGAPSFS 256 (433)
T ss_pred ceEEEEEECCCCC--CceEeecC--CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC-EEEeccCCCCccCceEC
Confidence 4567999998543 34445543 2235578999999999998766667889999999886 66666433112 24599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||++|+|..+.++ +.+||++++++ +..+ .++..... ...++|++| .+++.....+..+++++++.. +..+
T Consensus 257 pDG~~l~~~~s~~g--~~~Iy~~d~~~-g~~~-~lt~~~~~-~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~--g~~~ 329 (433)
T PRK04922 257 PDGRRLALTLSRDG--NPEIYVMDLGS-RQLT-RLTNHFGI-DTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG--GSAE 329 (433)
T ss_pred CCCCEEEEEEeCCC--CceEEEEECCC-CCeE-ECccCCCC-ccceEECCCCCEEEEEECCCCCceEEEEECCC--CCeE
Confidence 99999999876543 35899999986 4433 44443322 235677775 577777667777888887753 3232
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++ ++.. .+ ...+.+++|++.+++.... .....|+++++.+++
T Consensus 330 ~l------t~~g-~~-~~~~~~SpDG~~Ia~~~~~-~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 330 RL------TFQG-NY-NARASVSPDGKKIAMVHGS-GGQYRIAVMDLSTGS 371 (433)
T ss_pred Ee------ecCC-CC-ccCEEECCCCCEEEEEECC-CCceeEEEEECCCCC
Confidence 22 2211 11 1235678999988887543 223478999987776
No 113
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.23 E-value=2e-10 Score=131.98 Aligned_cols=221 Identities=15% Similarity=0.100 Sum_probs=127.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
..|.||++||..++.. .|......|. .+|.|+.+|+||.|.+...-............++++.+.+..++++- ..
T Consensus 1370 ~~~~vVllHG~~~s~~--~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l--~~ 1444 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE--DWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI--TP 1444 (1655)
T ss_pred CCCeEEEECCCCCCHH--HHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh--CC
Confidence 4589999999876643 3555455554 46999999999998764211000000111234555555555554432 34
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh-------hccCCC----C-CCCcccc-ccc-C-----CC-
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-------TMLDPT----I-PLTTAEW-EEW-G-----DP- 401 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~-------~~~~~~----~-~~~~~~~-~~~-g-----~~- 401 (505)
+++.++||||||.+++.++.++|++++++|..++...+.. ...... . ......+ ..+ . ..
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhc
Confidence 6899999999999999999999999998887654311100 000000 0 0000000 000 0 00
Q ss_pred CCHHHH----------------HHHHhC------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC-----
Q 010654 402 WKEEFY----------------FYMKSY------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK----- 454 (505)
Q Consensus 402 ~~~~~~----------------~~~~~~------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~----- 454 (505)
..+... ..+... +-...+.++++| +|+++|++|..++ ..+.++.+.+.+..
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~P-tLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~ 1602 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTP-LLLVVGEKDVKFK-QIAQKMYREIGKSKESGND 1602 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCC-EEEEEECCCCccH-HHHHHHHHHcccccccccc
Confidence 001000 011111 111346677888 9999999999775 66777777775531
Q ss_pred ---CCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 010654 455 ---TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 455 ---~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 494 (505)
..+++++++ ++||....+.++.+.. .+.+||.+.-
T Consensus 1603 ~~~~~a~lvvI~---~aGH~~~lE~Pe~f~~--~I~~FL~~~~ 1640 (1655)
T PLN02980 1603 KGKEIIEIVEIP---NCGHAVHLENPLPVIR--ALRKFLTRLH 1640 (1655)
T ss_pred ccccceEEEEEC---CCCCchHHHCHHHHHH--HHHHHHHhcc
Confidence 124788888 8999876555554433 5788998754
No 114
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.23 E-value=2.3e-10 Score=105.60 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=124.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHH-HHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~ 339 (505)
...+.+|++||-.++... |......|+. .+.|..+|..|.|.+.+.-. ..........+.+.++ |-+++++
T Consensus 88 ~~~~plVliHGyGAg~g~--f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F----~~d~~~~e~~fvesiE~WR~~~~L- 159 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGL--FFRNFDDLAK-IRNVYAIDLLGFGRSSRPKF----SIDPTTAEKEFVESIEQWRKKMGL- 159 (365)
T ss_pred cCCCcEEEEeccchhHHH--HHHhhhhhhh-cCceEEecccCCCCCCCCCC----CCCcccchHHHHHHHHHHHHHcCC-
Confidence 345668888985433221 3334456666 79999999999887654211 1222233334555554 5556665
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh----------------c---cCCCCC---------CC
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT----------------M---LDPTIP---------LT 391 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~----------------~---~~~~~~---------~~ 391 (505)
+++.|+|||+|||++..+|.++|++++-.|...|.--...- + .....| +.
T Consensus 160 --~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~G 237 (365)
T KOG4409|consen 160 --EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLG 237 (365)
T ss_pred --cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccc
Confidence 58999999999999999999999999999888763210000 0 000000 00
Q ss_pred c-------------------ccc-ccc------CCCCCHHHHHHHH-----hCCh-hhcccCC--CCCeEEEEccCCCCC
Q 010654 392 T-------------------AEW-EEW------GDPWKEEFYFYMK-----SYSP-VDNVKAQ--NYPHILVTAGLNDPR 437 (505)
Q Consensus 392 ~-------------------~~~-~~~------g~~~~~~~~~~~~-----~~sp-~~~~~~~--~~Pp~Li~~G~~D~~ 437 (505)
. ..+ .+| .+|..+..+..+. +..| ++++..+ .+| +++|+|++|.
T Consensus 238 p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~p-v~fiyG~~dW- 315 (365)
T KOG4409|consen 238 PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVP-VTFIYGDRDW- 315 (365)
T ss_pred hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCC-EEEEecCccc-
Confidence 0 000 000 1122222222221 1233 2344444 487 9999999986
Q ss_pred CCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 438 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 438 vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
+....+.++...|. ...++.++.+ ++||+...++++.+++ .+..++.
T Consensus 316 mD~~~g~~~~~~~~--~~~~~~~~v~---~aGHhvylDnp~~Fn~--~v~~~~~ 362 (365)
T KOG4409|consen 316 MDKNAGLEVTKSLM--KEYVEIIIVP---GAGHHVYLDNPEFFNQ--IVLEECD 362 (365)
T ss_pred ccchhHHHHHHHhh--cccceEEEec---CCCceeecCCHHHHHH--HHHHHHh
Confidence 45566777777663 3456778888 8999887777776665 3444543
No 115
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.22 E-value=2.7e-11 Score=102.60 Aligned_cols=211 Identities=17% Similarity=0.235 Sum_probs=124.4
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHH-HHCCcEEEEEcc--cCCCCCch----------hHH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSL-LDRGFIFAIAQI--RGGGELGR----------QWY 311 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l-~~~G~~v~~~d~--rG~~~~g~----------~~~ 311 (505)
.+..-++.|+.. ..+++.|++.++-|-........-...+|.. ...|++|+.||- ||-.--|. -|.
T Consensus 27 ~Mtf~vylPp~a-~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFY 105 (283)
T KOG3101|consen 27 SMTFGVYLPPDA-PRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFY 105 (283)
T ss_pred ceEEEEecCCCc-ccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeE
Confidence 455557889887 5667799999998875543332111223444 456999999994 65431111 111
Q ss_pred -HcccccCCc--chHHHHHHHHHHHHH--cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC
Q 010654 312 -ENGKFLKKK--NTFTDFIACAEYLIK--NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP 386 (505)
Q Consensus 312 -~~~~~~~~~--~~~~D~~~~~~~l~~--~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~ 386 (505)
++-...|.. ..++-+..-+-.++. .--+|+.+++|+||||||+-++..+.+.|.+++.+.+.+|+.|..
T Consensus 106 vnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~------ 179 (283)
T KOG3101|consen 106 VNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI------ 179 (283)
T ss_pred EecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc------
Confidence 111111211 222222222222222 234799999999999999999999999999999999999999864
Q ss_pred CCCCCccccccc-CCCCCHHHHHHHHhCChhhcccCC---CCCeEEEEccCCCCCCCCCh--HHHHHHHHHhcCCCCCeE
Q 010654 387 TIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQ---NYPHILVTAGLNDPRVMYSE--PAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 387 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~---~~Pp~Li~~G~~D~~vp~~~--~~~~~~~L~~~~~~~~~~ 460 (505)
..|+....+.-| |+ ++..| .++++..-++++ .. .+||-+|..|...+ .| .+.|.++.+... ...+
T Consensus 180 ~cpWGqKAf~gYLG~--~ka~W---~~yDat~lik~y~~~~~-~ilIdqG~~D~Fl~-~qLlPe~l~~a~~~~~--~~~v 250 (283)
T KOG3101|consen 180 NCPWGQKAFTGYLGD--NKAQW---EAYDATHLIKNYRGVGD-DILIDQGAADNFLA-EQLLPENLLEACKATW--QAPV 250 (283)
T ss_pred cCcchHHHhhcccCC--ChHHH---hhcchHHHHHhcCCCCc-cEEEecCccchhhh-hhcChHHHHHHhhccc--cccE
Confidence 344444444323 33 55544 445665444444 34 49999999998876 22 233444443222 1234
Q ss_pred EEEecCCCCCC
Q 010654 461 LFKCELGAGHF 471 (505)
Q Consensus 461 ~~~~~~~~gH~ 471 (505)
+++..+|-.|.
T Consensus 251 ~~r~~~gyDHS 261 (283)
T KOG3101|consen 251 VFRLQEGYDHS 261 (283)
T ss_pred EEEeecCCCcc
Confidence 55544466774
No 116
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.21 E-value=5e-10 Score=110.07 Aligned_cols=225 Identities=14% Similarity=0.106 Sum_probs=130.5
Q ss_pred CCCcEEEEEcCCCCcC-C---------CCCCch-hH---HHHHHCCcEEEEEcccCCCC--------CchhHHHcccc--
Q 010654 261 GSDPLLLYGYGSYEIC-N---------DPAFNS-SR---LSLLDRGFIFAIAQIRGGGE--------LGRQWYENGKF-- 316 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~-~---------~~~~~~-~~---~~l~~~G~~v~~~d~rG~~~--------~g~~~~~~~~~-- 316 (505)
.+.++||++|+-.+.. . .++|.. .+ ..+--.-|-|+++|.-|++. .|..-...+.+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 4569999999865422 1 122221 11 23434569999999998753 12111111111
Q ss_pred ---cCCcchHHHHHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCCch---hh-----hh---
Q 010654 317 ---LKKKNTFTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---DV-----LT--- 381 (505)
Q Consensus 317 ---~~~~~~~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~---d~-----~~--- 381 (505)
......+.|+.+++..+++.-.+ +++. ++|+||||..++.++.++|++++.+|..++-. .+ ..
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHH
Confidence 12236788888888777765333 5675 99999999999999999999999888775421 11 11
Q ss_pred -hc-cCC----------CCCC--------------Ccccc--cccCCC----C----------CHHHH------------
Q 010654 382 -TM-LDP----------TIPL--------------TTAEW--EEWGDP----W----------KEEFY------------ 407 (505)
Q Consensus 382 -~~-~~~----------~~~~--------------~~~~~--~~~g~~----~----------~~~~~------------ 407 (505)
.. .++ ..|. ....+ ..++.. . ..+.|
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 00 010 0010 00000 001110 0 00111
Q ss_pred ---------HHHHhC-------ChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 408 ---------FYMKSY-------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 408 ---------~~~~~~-------sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
..+..+ +....+.++++| +|+|+|+.|..+|+.+++++++.+...+..+++++++. ..||.
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~P-tLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s--~~GH~ 368 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEAN-VLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIES--INGHM 368 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCC-EEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECC--CCCcc
Confidence 000001 123345577888 99999999999999999999999987666677777762 37897
Q ss_pred CCCChHHHHHHHHHHHHHHHH
Q 010654 472 SKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 472 ~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.....++.+.. .+.+||.+
T Consensus 369 ~~le~p~~~~~--~I~~FL~~ 387 (389)
T PRK06765 369 AGVFDIHLFEK--KIYEFLNR 387 (389)
T ss_pred hhhcCHHHHHH--HHHHHHcc
Confidence 65444544433 46778754
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.20 E-value=1.6e-10 Score=97.60 Aligned_cols=180 Identities=19% Similarity=0.195 Sum_probs=124.4
Q ss_pred CCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
...|++|++|||++...+.... ........+||+|+.++|--+.. ...-...+.++...++|+.+.-.
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----------~htL~qt~~~~~~gv~filk~~~- 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----------VHTLEQTMTQFTHGVNFILKYTE- 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc----------cccHHHHHHHHHHHHHHHHHhcc-
Confidence 4579999999999765442222 23456778999999998853321 12223678999999999988632
Q ss_pred CCCcEEEEeeChHHHHHHHHHhh-CCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh-hh
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP-VD 417 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp-~~ 417 (505)
..+.+.+.|||+|+.+++.+.++ +..++.+++..+|++++...... ... ...|-.++. ....|+ +.
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~t-e~g------~dlgLt~~~-----ae~~Scdl~ 201 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNT-ESG------NDLGLTERN-----AESVSCDLW 201 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCC-ccc------cccCcccch-----hhhcCccHH
Confidence 34679999999999999887765 44588999999999997543211 100 112222111 122344 33
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
..+.++.| +|++.++.|.---++|.+.|+..++++ ++..|+ +.+|.
T Consensus 202 ~~~~v~~~-ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~---n~~hy 247 (270)
T KOG4627|consen 202 EYTDVTVW-ILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFK---NYDHY 247 (270)
T ss_pred HhcCceee-eeEeeecccCcHHHHhhhhHHHHhhhc----ceeecC---Ccchh
Confidence 45566776 999999999998999999999999874 455787 77885
No 118
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.19 E-value=8.5e-09 Score=103.90 Aligned_cols=179 Identities=11% Similarity=0.061 Sum_probs=117.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ceeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~ 85 (505)
..+||++|.... ....+... ......+.|||||++|++.+.......||++|+.++. .+++..... .....|||
T Consensus 183 ~~~i~i~d~dg~--~~~~lt~~--~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~-~~~l~~~~g~~~~~~wSP 257 (429)
T PRK01742 183 PYEVRVADYDGF--NQFIVNRS--SQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA-RKVVASFRGHNGAPAFSP 257 (429)
T ss_pred eEEEEEECCCCC--CceEeccC--CCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc-eEEEecCCCccCceeECC
Confidence 478999997432 23334432 2345689999999999998766566789999999886 666653321 12345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|++....++ ..+||++++++ +... .++.... ....+.|++| .+++....++..+++.++.. +...+.
T Consensus 258 DG~~La~~~~~~g--~~~Iy~~d~~~-~~~~-~lt~~~~-~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~--~~~~~~ 330 (429)
T PRK01742 258 DGSRLAFASSKDG--VLNIYVMGANG-GTPS-QLTSGAG-NNTEPSWSPDGQSILFTSDRSGSPQVYRMSAS--GGGASL 330 (429)
T ss_pred CCCEEEEEEecCC--cEEEEEEECCC-CCeE-eeccCCC-CcCCEEECCCCCEEEEEECCCCCceEEEEECC--CCCeEE
Confidence 9999999875433 35899999876 4433 4554333 3456788876 56777666677777776654 332221
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+ . ...+ ...+++|++.+++... ..++.+++.+++
T Consensus 331 l------~--~~~~---~~~~SpDG~~ia~~~~-----~~i~~~Dl~~g~ 364 (429)
T PRK01742 331 V------G--GRGY---SAQISADGKTLVMING-----DNVVKQDLTSGS 364 (429)
T ss_pred e------c--CCCC---CccCCCCCCEEEEEcC-----CCEEEEECCCCC
Confidence 1 1 1111 2457899998877654 467888988776
No 119
>COG0627 Predicted esterase [General function prediction only]
Probab=99.18 E-value=5.2e-10 Score=105.42 Aligned_cols=226 Identities=16% Similarity=0.148 Sum_probs=135.5
Q ss_pred CCCCcEEEEEcCCCCcCCC-CCCchhHHHHHHCCcEEEEEccc--------------CCC-CCchhHHHcccccCCcchH
Q 010654 260 DGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIR--------------GGG-ELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~r--------------G~~-~~g~~~~~~~~~~~~~~~~ 323 (505)
+++.|++++.||-...... ..+........+.|++++.+|-. |.+ ++-.+|........ ...+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccch
Confidence 4668888888875443211 11122223445568888887322 322 33344443221111 2334
Q ss_pred HHHHH-HHH-HHHHcCCCCC--CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCC---CCCCCcccc-
Q 010654 324 TDFIA-CAE-YLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---TIPLTTAEW- 395 (505)
Q Consensus 324 ~D~~~-~~~-~l~~~~~~d~--~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~---~~~~~~~~~- 395 (505)
++++. -+- .+.+...++. ++.+|+|+||||+-++.+|.++|++|+.+.+.+|+++....+... ..+.....+
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~ 209 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFN 209 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHH
Confidence 44432 122 2333344455 389999999999999999999999999999999999876443322 111111111
Q ss_pred cccCCCCCHHHHHHHHhCChhhcccC---C----------CCCeEEEEccCCCCCCC--CChHHHHHHHHHhcCCCCCeE
Q 010654 396 EEWGDPWKEEFYFYMKSYSPVDNVKA---Q----------NYPHILVTAGLNDPRVM--YSEPAKFVAKLREMKTDDNIL 460 (505)
Q Consensus 396 ~~~g~~~~~~~~~~~~~~sp~~~~~~---~----------~~Pp~Li~~G~~D~~vp--~~~~~~~~~~L~~~~~~~~~~ 460 (505)
..+|...++. +++++|..++++ . ..|++++-+|..|.... ...++.+.++++++|.+..+.
T Consensus 210 ~~~G~~~~~~----w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~ 285 (316)
T COG0627 210 AMLGPDSDPA----WQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVR 285 (316)
T ss_pred HhcCCCcccc----ccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceee
Confidence 2244443321 245677666653 1 23458999999998774 344889999999999998766
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 461 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 461 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.++ ++.|... --...+...+.|+.+.|+..
T Consensus 286 ~~~---~G~Hsw~----~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 286 DQP---GGDHSWY----FWASQLADHLPWLAGALGLA 315 (316)
T ss_pred eCC---CCCcCHH----HHHHHHHHHHHHHHHHhccC
Confidence 664 7788532 11223556789999988754
No 120
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.15 E-value=1.3e-09 Score=104.55 Aligned_cols=213 Identities=20% Similarity=0.229 Sum_probs=125.7
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
...|.||++||...+. ..|......|... |+.|+.+|..|.|-.+.. .........+....+..+......
T Consensus 56 ~~~~pvlllHGF~~~~--~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~------~~~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASS--FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL------PRGPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccCCc--ccHhhhccccccccceEEEEEecCCCCcCCCC------CCCCceehhHHHHHHHHHHHhhcC
Confidence 4578999999975533 3355444455554 799999999995532211 111114455555555554444332
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEE---ecCCchhhhhhc-------cC-------CCCCC---Cc-ccccc-
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV---AAVPFVDVLTTM-------LD-------PTIPL---TT-AEWEE- 397 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v---~~~~~~d~~~~~-------~~-------~~~~~---~~-~~~~~- 397 (505)
+++-++|+|+||+++..+|+.+|+..+..+ ...+........ .+ ...+. .. ..|.+
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 459999999999999999999999999988 443322110000 00 00000 00 00100
Q ss_pred --------cCCC-CCHHHHHHH---------------------Hh--CChhhcccCCC-CCeEEEEccCCCCCCCCChHH
Q 010654 398 --------WGDP-WKEEFYFYM---------------------KS--YSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 398 --------~g~~-~~~~~~~~~---------------------~~--~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
+.++ ...+....+ .. ..+...++++. +| +||++|+.|+.+|.+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p-vlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCP-VLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCc-eEEEEcCcCCccCHHHHH
Confidence 0011 000000000 00 22334567775 88 999999999999998776
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 445 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.+.+.+ -.+++...+ ++||....++++.+.. .+..|+.++
T Consensus 285 ~~~~~~----pn~~~~~I~---~~gH~~h~e~Pe~~~~--~i~~Fi~~~ 324 (326)
T KOG1454|consen 285 ELKKKL----PNAELVEIP---GAGHLPHLERPEEVAA--LLRSFIARL 324 (326)
T ss_pred HHHhhC----CCceEEEeC---CCCcccccCCHHHHHH--HHHHHHHHh
Confidence 665554 456777777 8999877667765544 678898775
No 121
>PRK05855 short chain dehydrogenase; Validated
Probab=99.14 E-value=6.9e-10 Score=117.07 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=65.4
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
...||.+|.+..+ . +...|.||++||.++... .|......| ..||.|+.+|+||+|.+...... ....
T Consensus 8 ~~~~g~~l~~~~~-g------~~~~~~ivllHG~~~~~~--~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~--~~~~ 75 (582)
T PRK05855 8 VSSDGVRLAVYEW-G------DPDRPTVVLVHGYPDNHE--VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRT--AAYT 75 (582)
T ss_pred EeeCCEEEEEEEc-C------CCCCCeEEEEcCCCchHH--HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcc--cccC
Confidence 3458888865422 1 123589999999875532 355555555 67999999999999876431100 0001
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 319 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 319 ~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
-....+|+.++++.+ + . +.++.++|||+||.+++.++.+
T Consensus 76 ~~~~a~dl~~~i~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 76 LARLADDFAAVIDAV---S-P-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHHHHHHHHh---C-C-CCcEEEEecChHHHHHHHHHhC
Confidence 112334444444443 1 1 2349999999999888777664
No 122
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.13 E-value=1.4e-10 Score=119.45 Aligned_cols=129 Identities=18% Similarity=0.114 Sum_probs=92.0
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-C-cEEEEEccc-CCCCCchhHHHcccccCCcc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-G-FIFAIAQIR-GGGELGRQWYENGKFLKKKN 321 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G-~~v~~~d~r-G~~~~g~~~~~~~~~~~~~~ 321 (505)
-+...++.|... ...++.|+||++|||+......... ....|+.. + ++|+.+||| |.-|+..... ....+..
T Consensus 78 cl~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~---~~~~~n~ 152 (493)
T cd00312 78 CLYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGD---IELPGNY 152 (493)
T ss_pred CCeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCC---CCCCcch
Confidence 455667778754 3456789999999986543333222 23455554 3 999999999 6666644221 1223345
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCchh
Q 010654 322 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVD 378 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d 378 (505)
.+.|+..|++|+.++ -..||+||.|+|+|+||++++.++.. .+.+|+++|+.+|...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 689999999999876 23799999999999999999988875 2347999998887654
No 123
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.07 E-value=1.1e-09 Score=98.95 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=87.3
Q ss_pred eEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHH
Q 010654 247 PICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF 326 (505)
Q Consensus 247 ~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~ 326 (505)
+..+++|... +.+|++|+.||-. .. ...|....+.+++.||+|+.+|+..-.+ .....+++++
T Consensus 5 ~l~v~~P~~~----g~yPVv~f~~G~~-~~-~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~~ 67 (259)
T PF12740_consen 5 PLLVYYPSSA----GTYPVVLFLHGFL-LI-NSWYSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVASA 67 (259)
T ss_pred CeEEEecCCC----CCcCEEEEeCCcC-CC-HHHHHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHHH
Confidence 4567888765 7899999999975 22 2226666788999999999999653221 2223567888
Q ss_pred HHHHHHHHHc---C-----CCCCCcEEEEeeChHHHHHHHHHhhC-----CCceeEEEecCCch
Q 010654 327 IACAEYLIKN---C-----YCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFV 377 (505)
Q Consensus 327 ~~~~~~l~~~---~-----~~d~~rv~i~G~S~GG~~~~~~~~~~-----p~~~~a~v~~~~~~ 377 (505)
.+.++|+.+. . .+|-+|++|+|||.||-++..++..+ +.+|++++...|+-
T Consensus 68 ~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 68 AEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 8889998763 1 25888999999999999999888876 45899999999975
No 124
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.05 E-value=1.6e-09 Score=105.84 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=64.7
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC------chhHHHcc-------c------ccC-Cc
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL------GRQWYENG-------K------FLK-KK 320 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~------g~~~~~~~-------~------~~~-~~ 320 (505)
+++|+||+-||..+.+. .|...+..||++||+|++++.|-.... ...-.... . ... ..
T Consensus 98 ~~~PvvIFSHGlgg~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 77999999999876644 377788999999999999999954321 11100000 0 000 00
Q ss_pred -----------chHHHHHHHHHHHHH--c------------------CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeE
Q 010654 321 -----------NTFTDFIACAEYLIK--N------------------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA 369 (505)
Q Consensus 321 -----------~~~~D~~~~~~~l~~--~------------------~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a 369 (505)
.=..|+..+++.|.+ . +.+|.++|+++|||+||..++.++.+. .+|++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcce
Confidence 113456666666643 1 346788999999999999999988874 68999
Q ss_pred EEecCC
Q 010654 370 AVAAVP 375 (505)
Q Consensus 370 ~v~~~~ 375 (505)
+|+.-|
T Consensus 255 ~I~LD~ 260 (379)
T PF03403_consen 255 GILLDP 260 (379)
T ss_dssp EEEES-
T ss_pred EEEeCC
Confidence 987655
No 125
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.05 E-value=6.1e-10 Score=107.74 Aligned_cols=129 Identities=21% Similarity=0.268 Sum_probs=89.3
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCC---CcCCCCCCchhHHHHHHCC-cEEEEEcccCCCCCch-hHHHcc
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFNSSRLSLLDRG-FIFAIAQIRGGGELGR-QWYENG 314 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~---~~~~~~~~~~~~~~l~~~G-~~v~~~d~rG~~~~g~-~~~~~~ 314 (505)
|.|. +...++.|. . ..++.|+||++|||. ++...+.|+ .+.|+++| ++|+.+|||-.- +|- ++....
T Consensus 76 sEDC--L~LNIwaP~-~--~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~ 147 (491)
T COG2272 76 SEDC--LYLNIWAPE-V--PAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGA-LGFLDLSSLD 147 (491)
T ss_pred cccc--eeEEeeccC-C--CCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCccccc-ceeeehhhcc
Confidence 3454 444556776 2 236689999999984 333444444 47899998 999999999543 221 222111
Q ss_pred --cccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEEEecCCch
Q 010654 315 --KFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFV 377 (505)
Q Consensus 315 --~~~~~~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~v~~~~~~ 377 (505)
........+.|++.|++|+.++ -.-||+.|.|+|.|+|++.++.+++. |. +|+.+|+.+|..
T Consensus 148 ~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 148 TEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 1111225689999999999876 34699999999999999999998874 65 677777776644
No 126
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.04 E-value=2.8e-08 Score=100.23 Aligned_cols=187 Identities=14% Similarity=0.065 Sum_probs=118.2
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAAS 84 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s 84 (505)
...+||+++.... ..+.++.. ......+.|||||++|+|.........||++|++++. .+.+....... ...|+
T Consensus 168 ~~~~l~~~d~~g~--~~~~l~~~--~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~-~~~~~~~~~~~~~~~~s 242 (417)
T TIGR02800 168 RRYELQVADYDGA--NPQTITRS--REPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ-REKVASFPGMNGAPAFS 242 (417)
T ss_pred CcceEEEEcCCCC--CCEEeecC--CCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEeecCCCCccceEEC
Confidence 3456888887432 34445432 2245678999999999998766566789999999986 55555332111 23499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
|||+.|++....++ ..+||.+++.+ +..+ .++.... ......|++| .+++...+.+..+++++++. +...+
T Consensus 243 pDg~~l~~~~~~~~--~~~i~~~d~~~-~~~~-~l~~~~~-~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~--~~~~~ 315 (417)
T TIGR02800 243 PDGSKLAVSLSKDG--NPDIYVMDLDG-KQLT-RLTNGPG-IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD--GGEVR 315 (417)
T ss_pred CCCCEEEEEECCCC--CccEEEEECCC-CCEE-ECCCCCC-CCCCEEECCCCCEEEEEECCCCCceEEEEECC--CCCEE
Confidence 99999999876532 35899999986 3333 3333222 1224566654 67777777777788888875 33222
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++ ... . ....+.++++++.++++.... .-..++.+++.++.
T Consensus 316 ~l~------~~~-~-~~~~~~~spdg~~i~~~~~~~-~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 316 RLT------FRG-G-YNASPSWSPDGDLIAFVHREG-GGFNIAVMDLDGGG 357 (417)
T ss_pred Eee------cCC-C-CccCeEECCCCCEEEEEEccC-CceEEEEEeCCCCC
Confidence 222 111 1 122345678898887776543 23478999987765
No 127
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.03 E-value=7.9e-09 Score=104.62 Aligned_cols=109 Identities=16% Similarity=0.053 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCCcCCCCCC---chhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 262 SDPLLLYGYGSYEICNDPAF---NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~---~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
..+.||++|+......-... +.....|+++||.|+++|.||.|.....+ .......+++.++++.+.+.
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~------~~ddY~~~~i~~al~~v~~~-- 258 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK------TFDDYIRDGVIAALEVVEAI-- 258 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC------ChhhhHHHHHHHHHHHHHHh--
Confidence 34567777875432221111 24567899999999999999887543321 11123445688888888764
Q ss_pred CCCCcEEEEeeChHHHHHH----HHHhhC-CCceeEEEecCCchh
Q 010654 339 CTKEKLCIEGRSAGGLLIG----AVLNMR-PDLFKAAVAAVPFVD 378 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~----~~~~~~-p~~~~a~v~~~~~~d 378 (505)
...+++.++|+|+||.+++ .+++.+ +++++.++..+...|
T Consensus 259 ~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 259 TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 2457899999999999852 234444 678888877665554
No 128
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.01 E-value=5.9e-08 Score=97.87 Aligned_cols=182 Identities=14% Similarity=0.050 Sum_probs=116.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~d 86 (505)
.+||++++.++. ...+... ......+.|||||+.|++........+||++|+.++. .+.++...... ...|+||
T Consensus 214 ~~i~v~d~~~g~--~~~~~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~s~d 288 (417)
T TIGR02800 214 PEIYVQDLATGQ--REKVASF--PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ-LTRLTNGPGIDTEPSWSPD 288 (417)
T ss_pred cEEEEEECCCCC--EEEeecC--CCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC-EEECCCCCCCCCCEEECCC
Confidence 579999997752 2333322 2233457899999999988766667899999999886 77776543222 2359999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
|++|+|.++..+ ..+||.+++.+ +..+ .++.... ....+.|++| .+++.....+..+++++++.. +..+.+
T Consensus 289 g~~l~~~s~~~g--~~~iy~~d~~~-~~~~-~l~~~~~-~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--~~~~~l 361 (417)
T TIGR02800 289 GKSIAFTSDRGG--SPQIYMMDADG-GEVR-RLTFRGG-YNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--GGERVL 361 (417)
T ss_pred CCEEEEEECCCC--CceEEEEECCC-CCEE-EeecCCC-CccCeEECCCCCEEEEEEccCCceEEEEEeCCC--CCeEEc
Confidence 999999987643 24899999876 4333 3332222 2345677765 556665555666788888763 322222
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
+. .. ....+.++++++.+++....... ..+++.+..+
T Consensus 362 ~~--------~~-~~~~p~~spdg~~l~~~~~~~~~-~~l~~~~~~g 398 (417)
T TIGR02800 362 TD--------TG-LDESPSFAPNGRMILYATTRGGR-GVLGLVSTDG 398 (417)
T ss_pred cC--------CC-CCCCceECCCCCEEEEEEeCCCc-EEEEEEECCC
Confidence 21 11 11234678899988887775544 4677776543
No 129
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.01 E-value=1.6e-08 Score=100.08 Aligned_cols=191 Identities=16% Similarity=0.087 Sum_probs=123.3
Q ss_pred CCCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccc-eEEEEEeCCCCCceeeeeccccceeE
Q 010654 3 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKIT-RFVFYLDVSKPEELRVLTPRVVGVDT 81 (505)
Q Consensus 3 ~~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~-~~l~~~d~~~~~~~~~l~~~~~~~~~ 81 (505)
...++.++++.|-- +.... .+.. ...-...+.|||||+.+++..-.... .++|++|++++...+.+.........
T Consensus 168 ~~~~~~~l~~~D~d-g~~~~-~l~~--~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P 243 (425)
T COG0823 168 GGPLPYELALGDYD-GYNQQ-KLTD--SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAP 243 (425)
T ss_pred cCCCCceEEEEccC-Cccee-Eecc--cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCc
Confidence 45677788888852 21112 2221 12234468999999999998655544 79999999999733333322222234
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCCCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
.|||||++|+|...+++ +.+||++|+.+.. .+.++....... ...|++ +.++|+..+.|+.++++++++ +.
T Consensus 244 ~fspDG~~l~f~~~rdg--~~~iy~~dl~~~~--~~~Lt~~~gi~~-~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~--g~ 316 (425)
T COG0823 244 AFSPDGSKLAFSSSRDG--SPDIYLMDLDGKN--LPRLTNGFGINT-SPSWSPDGSKIVFTSDRGGRPQIYLYDLE--GS 316 (425)
T ss_pred cCCCCCCEEEEEECCCC--CccEEEEcCCCCc--ceecccCCcccc-CccCCCCCCEEEEEeCCCCCcceEEECCC--CC
Confidence 59999999999998863 4699999998733 224554443322 555655 479999999999999999877 44
Q ss_pred cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 160 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..++ +++...... .+.+++|++.++|....... ..+...++.++.
T Consensus 317 ~~~r------iT~~~~~~~--~p~~SpdG~~i~~~~~~~g~-~~i~~~~~~~~~ 361 (425)
T COG0823 317 QVTR------LTFSGGGNS--NPVWSPDGDKIVFESSSGGQ-WDIDKNDLASGG 361 (425)
T ss_pred ceeE------eeccCCCCc--CccCCCCCCEEEEEeccCCc-eeeEEeccCCCC
Confidence 3332 333222222 35678999999988754222 556666665554
No 130
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.00 E-value=8e-09 Score=90.18 Aligned_cols=182 Identities=18% Similarity=0.123 Sum_probs=99.3
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|+|+||...+..+.......+.+.+.|. .+..+|++ ....+..+.++.+++.. .++
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------------~~p~~a~~~l~~~i~~~--~~~ 59 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------------PFPEEAIAQLEQLIEEL--KPE 59 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------------cCHHHHHHHHHHHHHhC--CCC
Confidence 48999997655444333334456777664 44555443 22344455555555553 234
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCC--CCHHHHHHHHhCChhhccc
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP--WKEEFYFYMKSYSPVDNVK 420 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~sp~~~~~ 420 (505)
.++++|.|+||+.+.+++.+++ +++ |..+|.+.....+.. .+. ......++.. ..+.....++++.... .
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~-~iG--~~~~~~~~e~~~~~~~~~~~l~~l~~~~--~ 131 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD-YIG--EQTNPYTGESYELTEEHIEELKALEVPY--P 131 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH-hhC--ccccCCCCccceechHhhhhcceEeccc--c
Confidence 5999999999999999998764 344 777887765444321 110 0000001111 1222222222211110 1
Q ss_pred CCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 010654 421 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 490 (505)
Q Consensus 421 ~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 490 (505)
.... ++++++++.|+.+++.++.+.++. +..++.+ |++|.+.. .. +....+.+|+
T Consensus 132 ~~~~-~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~---ggdH~f~~-f~---~~l~~i~~f~ 186 (187)
T PF05728_consen 132 TNPE-RYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEE---GGDHSFQD-FE---EYLPQIIAFL 186 (187)
T ss_pred CCCc-cEEEEEecCCcccCHHHHHHHhcC-------ceEEEEe---CCCCCCcc-HH---HHHHHHHHhh
Confidence 1133 499999999999999666554432 2234454 77997642 22 2233577776
No 131
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.97 E-value=1.7e-08 Score=112.17 Aligned_cols=107 Identities=11% Similarity=0.042 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCCCcCCCCCCch---hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCC-cchHHHHHHHHHHHHHcC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK-KNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~ 337 (505)
..|.||++||.......+...+ ....|+++||.|+++|+. ... ..- ...... ...+.++.++++.+.+..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~~~--~~~---~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG-SPD--KVE---GGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC-CCC--hhH---cCccCCHHHHHHHHHHHHHHHHHhh
Confidence 4588999999876654433322 257888999999999963 221 110 000111 122234455555554443
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhC-CCceeEEEecCCch
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFV 377 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~-p~~~~a~v~~~~~~ 377 (505)
.+++.++|+|+||.+++.+++.+ +++++.++..+...
T Consensus 140 ---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 140 ---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred ---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 25799999999999998877644 55788877644433
No 132
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=4.8e-08 Score=98.49 Aligned_cols=176 Identities=11% Similarity=0.063 Sum_probs=107.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~ 85 (505)
..+||+|++.+++ .+.+... +.....++|||||++|++........+||++|++++. .+.++..... ....|||
T Consensus 227 ~~~i~i~dl~tg~--~~~l~~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSp 301 (429)
T PRK01742 227 KSQLVVHDLRSGA--RKVVASF--RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSP 301 (429)
T ss_pred CcEEEEEeCCCCc--eEEEecC--CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECC
Confidence 3569999997753 3334322 2233468999999999998765556789999999886 7888764422 2345999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKS 163 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (505)
||++|+|.++.++ ..+||.++..+ +..+ .++... ....|++| .+++... ..+.++++.. +..+.
T Consensus 302 DG~~i~f~s~~~g--~~~I~~~~~~~-~~~~-~l~~~~----~~~~~SpDG~~ia~~~~----~~i~~~Dl~~--g~~~~ 367 (429)
T PRK01742 302 DGQSILFTSDRSG--SPQVYRMSASG-GGAS-LVGGRG----YSAQISADGKTLVMING----DNVVKQDLTS--GSTEV 367 (429)
T ss_pred CCCEEEEEECCCC--CceEEEEECCC-CCeE-EecCCC----CCccCCCCCCEEEEEcC----CCEEEEECCC--CCeEE
Confidence 9999999987643 35999999875 3334 344322 13456665 4444432 3466677653 22222
Q ss_pred cCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCC
Q 010654 164 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
++.. .....++++|+++.+++... ...-..++..+..+
T Consensus 368 lt~~---------~~~~~~~~sPdG~~i~~~s~-~g~~~~l~~~~~~G 405 (429)
T PRK01742 368 LSST---------FLDESPSISPNGIMIIYSST-QGLGKVLQLVSADG 405 (429)
T ss_pred ecCC---------CCCCCceECCCCCEEEEEEc-CCCceEEEEEECCC
Confidence 2211 11123567899997777654 33333455555443
No 133
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.95 E-value=5.6e-09 Score=90.35 Aligned_cols=224 Identities=17% Similarity=0.121 Sum_probs=123.1
Q ss_pred EEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccc
Q 010654 236 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 315 (505)
Q Consensus 236 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~ 315 (505)
+.++.+||..+++. .+|.+. +.+-.+.+-|+++... -.|....+..+.+||.|+..||||.|++-..-..-..
T Consensus 8 ~~l~~~DG~~l~~~-~~pA~~-----~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQ-RFPADG-----KASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccc-cccCCC-----CCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 45678899999887 555543 3443444445555432 1234445677778999999999999976443211101
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecC--CchhhhhhccC-------C
Q 010654 316 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV--PFVDVLTTMLD-------P 386 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~--~~~d~~~~~~~-------~ 386 (505)
.........|+.++++++.+.-. ...+..+|||+||.+...+.. ++..-.+++..+ +..-++..... .
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWN 157 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCC--CCceEEeeccccceeeccccc-CcccceeeEeccccccccchhhhhcccceeecc
Confidence 11223567899999999988421 235778999999987766544 562222222222 22222111000 0
Q ss_pred -CCC---CCccc--ccccCCCC------CHHHHHHHHh-----CChh-----hcccCCCCCeEEEEccCCCCCCCCChHH
Q 010654 387 -TIP---LTTAE--WEEWGDPW------KEEFYFYMKS-----YSPV-----DNVKAQNYPHILVTAGLNDPRVMYSEPA 444 (505)
Q Consensus 387 -~~~---~~~~~--~~~~g~~~------~~~~~~~~~~-----~sp~-----~~~~~~~~Pp~Li~~G~~D~~vp~~~~~ 444 (505)
..+ ..... +...|.++ -.+...|.+. .+|. +..+++++| |..+...+|+-+|+....
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtP-i~~~~~~DD~w~P~As~d 236 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTP-ITFSRALDDPWAPPASRD 236 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCc-eeeeccCCCCcCCHHHHH
Confidence 000 00000 01112221 0111112221 1221 224456887 999999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEecC-CCCCCC
Q 010654 445 KFVAKLREMKTDDNILLFKCEL-GAGHFS 472 (505)
Q Consensus 445 ~~~~~L~~~~~~~~~~~~~~~~-~~gH~~ 472 (505)
.|......+ +.++..++... --||..
T Consensus 237 ~f~~~y~nA--pl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 237 AFASFYRNA--PLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HHHHhhhcC--cccceecCcccCcccchh
Confidence 998887765 44556665321 147843
No 134
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.92 E-value=6.4e-09 Score=87.89 Aligned_cols=210 Identities=13% Similarity=0.082 Sum_probs=118.2
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
-.|+.+-|.-++. ...|.+....+.. .-+.++..|.||.|-+-..-+ ...-+--.+|..+|++-+.+. +-+
T Consensus 43 ~~iLlipGalGs~-~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R----kf~~~ff~~Da~~avdLM~aL---k~~ 114 (277)
T KOG2984|consen 43 NYILLIPGALGSY-KTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER----KFEVQFFMKDAEYAVDLMEAL---KLE 114 (277)
T ss_pred ceeEecccccccc-cccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc----cchHHHHHHhHHHHHHHHHHh---CCC
Confidence 3456666765543 3346654443333 248999999998775422111 111123457777888877765 347
Q ss_pred cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch--hhhhhccCCCCCCCcccc---------cccCCCCCHHHHH-HH
Q 010654 343 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV--DVLTTMLDPTIPLTTAEW---------EEWGDPWKEEFYF-YM 410 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~--d~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~-~~ 410 (505)
++.|+|||-||..++.+|+++++.+.-.|...+.. +-...+.-..+.- ...| ..||...-+..++ |.
T Consensus 115 ~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRd-v~kWs~r~R~P~e~~Yg~e~f~~~wa~wv 193 (277)
T KOG2984|consen 115 PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRD-VNKWSARGRQPYEDHYGPETFRTQWAAWV 193 (277)
T ss_pred CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHH-HhhhhhhhcchHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999998665555443321 1111110001100 0111 1122211222222 11
Q ss_pred HhCChh----------hcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHH
Q 010654 411 KSYSPV----------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 480 (505)
Q Consensus 411 ~~~sp~----------~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 480 (505)
....-. .-+.++++| +||+||..|+.|+-.++--+-..+. -.++.++| .++|.+..-..+.+
T Consensus 194 D~v~qf~~~~dG~fCr~~lp~vkcP-tli~hG~kDp~~~~~hv~fi~~~~~----~a~~~~~p---eGkHn~hLrya~eF 265 (277)
T KOG2984|consen 194 DVVDQFHSFCDGRFCRLVLPQVKCP-TLIMHGGKDPFCGDPHVCFIPVLKS----LAKVEIHP---EGKHNFHLRYAKEF 265 (277)
T ss_pred HHHHHHhhcCCCchHhhhcccccCC-eeEeeCCcCCCCCCCCccchhhhcc----cceEEEcc---CCCcceeeechHHH
Confidence 111111 236788998 9999999999999888755443333 23456777 67897643333333
Q ss_pred HHHHHHHHHHHH
Q 010654 481 REAAFTYTFLMR 492 (505)
Q Consensus 481 ~~~~~~~~fl~~ 492 (505)
+. .+++||.+
T Consensus 266 nk--lv~dFl~~ 275 (277)
T KOG2984|consen 266 NK--LVLDFLKS 275 (277)
T ss_pred HH--HHHHHHhc
Confidence 33 56788864
No 135
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.88 E-value=2.4e-07 Score=83.71 Aligned_cols=204 Identities=19% Similarity=0.138 Sum_probs=119.9
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
..+.+.+.+|..+...-.|-... ..+.+..+||-+||.||+..+ |......|.+.|+.++.+||+|.+......
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~--- 80 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYP--- 80 (297)
T ss_pred EEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCc---
Confidence 44556666776655544444332 233456699999999998766 555668899999999999999987532211
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch-------------hhh
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-------------DVL 380 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~-------------d~~ 380 (505)
.-...-.+-...++.|.++-.++ +++.++|||.|+-.++.++..+| ..++++.+|.- ...
T Consensus 81 ----~~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i 153 (297)
T PF06342_consen 81 ----DQQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETI 153 (297)
T ss_pred ----ccccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHH
Confidence 11122244455555566554454 78999999999999999999886 34555554420 000
Q ss_pred hhccCCCCCCCcc------cccccCCC--CCHHHHHHHHhCCh---------hhcccCCCCCeEEEEccCCCCCCCCChH
Q 010654 381 TTMLDPTIPLTTA------EWEEWGDP--WKEEFYFYMKSYSP---------VDNVKAQNYPHILVTAGLNDPRVMYSEP 443 (505)
Q Consensus 381 ~~~~~~~~~~~~~------~~~~~g~~--~~~~~~~~~~~~sp---------~~~~~~~~~Pp~Li~~G~~D~~vp~~~~ 443 (505)
.++.+ .+|.... .|...|-- ...+....++...- ++.+.+.++| +|++.|.+|..|.-+.+
T Consensus 154 ~~l~~-~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ik-vli~ygg~DhLIEeeI~ 231 (297)
T PF06342_consen 154 NYLYD-LLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIK-VLIAYGGKDHLIEEEIS 231 (297)
T ss_pred HHHHH-HhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCc-EEEEEcCcchhhHHHHH
Confidence 11110 0111000 01112221 22333333332111 2333444676 99999999999877777
Q ss_pred HHHHHHHHh
Q 010654 444 AKFVAKLRE 452 (505)
Q Consensus 444 ~~~~~~L~~ 452 (505)
.+++...+.
T Consensus 232 ~E~a~~f~~ 240 (297)
T PF06342_consen 232 FEFAMKFKG 240 (297)
T ss_pred HHHHHHhCC
Confidence 777666643
No 136
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.88 E-value=9.7e-10 Score=100.86 Aligned_cols=78 Identities=26% Similarity=0.247 Sum_probs=62.6
Q ss_pred cEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 293 FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
|.|+++|.||.|.....+ ..........|+.+.++.+++.-.+ +++.++|+||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHW----DPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCC----GSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCc----cCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 679999999998765311 1233446678999999988886434 4599999999999999999999999999999
Q ss_pred cCCc
Q 010654 373 AVPF 376 (505)
Q Consensus 373 ~~~~ 376 (505)
.++.
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9884
No 137
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.87 E-value=2.8e-08 Score=91.72 Aligned_cols=110 Identities=17% Similarity=0.171 Sum_probs=68.0
Q ss_pred CCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCC-CCCchhHHHcccccCCcchHHHHHHHHHHHHHcC--
Q 010654 262 SDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGG-GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-- 337 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~-~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-- 337 (505)
+.-+||+|-|-...-....|- .....|.+.||.|+.+..+-| +|+|..-. .++++|+.++|+||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhcc
Confidence 456899996644333333343 334566667999999999863 45554322 268999999999999873
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCC-----CceeEEEecCCchhh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRP-----DLFKAAVAAVPFVDV 379 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p-----~~~~a~v~~~~~~d~ 379 (505)
.-..++|.++|||-|..-++.++.... ..+.++|+.+||.|-
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 235689999999999999999887642 469999999999883
No 138
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.86 E-value=3.6e-08 Score=96.63 Aligned_cols=182 Identities=16% Similarity=0.129 Sum_probs=113.5
Q ss_pred CceEEEEECCCCCCCCeEEEE---ecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeecccc-c-e
Q 010654 7 PDKAWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVV-G-V 79 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~---~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~-~-~ 79 (505)
-.+|+++++.++... ..-.. .....+...+.|++|++.|++...+. ....++++|++++. .+.+..... + .
T Consensus 157 ~v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~-~~~~~~e~~~~Wv 234 (353)
T PF00930_consen 157 RVSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGE-TRVVLEETSDGWV 234 (353)
T ss_dssp EEEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTT-CEEEEEEESSSSS
T ss_pred ceEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCc-eeEEEEecCCcce
Confidence 356899999776322 22222 12344566899999999666664433 46789999998886 444432221 1 1
Q ss_pred ----eEEee-eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe--CCEEEEEEecCCeeEEEEE
Q 010654 80 ----DTAAS-HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 80 ----~~~~s-~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~d~l~~~~~~~~~~~l~~~ 152 (505)
...+. +++..+++.+..++ ..+||+++.++ +..+ .++.......+-+.|+ ++.++|+++.....+..+|
T Consensus 235 ~~~~~~~~~~~~~~~~l~~s~~~G--~~hly~~~~~~-~~~~-~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY 310 (353)
T PF00930_consen 235 DVYDPPHFLGPDGNEFLWISERDG--YRHLYLYDLDG-GKPR-QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLY 310 (353)
T ss_dssp SSSSEEEE-TTTSSEEEEEEETTS--SEEEEEEETTS-SEEE-ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEE
T ss_pred eeecccccccCCCCEEEEEEEcCC--CcEEEEEcccc-ccee-ccccCceeecccceEcCCCCEEEEEecCCCCCceEEE
Confidence 12244 88999888888654 46999999987 4444 4554433222334444 4589999887554444555
Q ss_pred EcCCC-CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc
Q 010654 153 RLPAV-GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 153 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
.++.+ ++.+++|++..... + ..++|++++.++.+++++..|+
T Consensus 311 ~v~~~~~~~~~~LT~~~~~~-----~---~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 311 RVSLDSGGEPKCLTCEDGDH-----Y---SASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp EEETTETTEEEESSTTSSTT-----E---EEEE-TTSSEEEEEEESSSSCE
T ss_pred EEEeCCCCCeEeccCCCCCc-----e---EEEECCCCCEEEEEEcCCCCCC
Confidence 55555 66677777542211 1 2456899999999999999985
No 139
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.86 E-value=1.3e-08 Score=95.48 Aligned_cols=129 Identities=16% Similarity=0.059 Sum_probs=89.4
Q ss_pred EEEEEECC-CCceeeEEEEEeCCccCC---CCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 234 ERKWASAS-DGTQIPICIVYRKNLVKL---DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 234 ~~~~~~s~-dG~~i~~~l~~p~~~~~~---~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
..+++... .+.+++.++++|... .. ..+.|+||+.||.... ..+|....+.|++.||+|..++..|+..-+..
T Consensus 39 ~~i~~~~~~r~~~~~v~~~~p~~~-~~~~~~~~~PlvvlshG~Gs~--~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~ 115 (365)
T COG4188 39 VTITLNDPQRDRERPVDLRLPQGG-TGTVALYLLPLVVLSHGSGSY--VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAP 115 (365)
T ss_pred EEEeccCcccCCccccceeccCCC-ccccccCcCCeEEecCCCCCC--ccchhhhHHHHhhCceEEEeccCCCcccccCC
Confidence 33444333 255778888887764 11 1479999999996544 44577777899999999999999997654333
Q ss_pred HHHccccc----CCcchHHHHHHHHHHHHHc---C----CCCCCcEEEEeeChHHHHHHHHHhhCCC
Q 010654 310 WYENGKFL----KKKNTFTDFIACAEYLIKN---C----YCTKEKLCIEGRSAGGLLIGAVLNMRPD 365 (505)
Q Consensus 310 ~~~~~~~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~rv~i~G~S~GG~~~~~~~~~~p~ 365 (505)
-...+... ..-.-..|+...+++|.+. + -+|+.||++.|||+|||.++.+++.+.+
T Consensus 116 ~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 116 AAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 22222111 1113356777777777766 4 4789999999999999999999876654
No 140
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.85 E-value=7.6e-09 Score=108.00 Aligned_cols=128 Identities=15% Similarity=0.139 Sum_probs=82.7
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--CCchhHHHHHHCCcEEEEEcccCCCCCchhHHHccc-cc-CCc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FL-KKK 320 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~-~~-~~~ 320 (505)
-+...|+.|... ....++|++|++|||.-..... ........+++++.+|+.+|||-+- +| |..... .. .+.
T Consensus 108 CL~LnI~~P~~~-~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~gN 183 (535)
T PF00135_consen 108 CLYLNIYTPSNA-SSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSGN 183 (535)
T ss_dssp --EEEEEEETSS-SSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBST
T ss_pred HHHHhhhhcccc-ccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cc--cccccccccCchh
Confidence 466678899887 4444899999999985433222 1222234567889999999999532 11 111111 11 255
Q ss_pred chHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhC--CCceeEEEecCCc
Q 010654 321 NTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPF 376 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~--p~~~~a~v~~~~~ 376 (505)
..+.|...|++|+.++ -.-||++|.|+|+|+||..+...+..- ..+|+.+|+.+|.
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 7899999999999886 236999999999999999988877652 2489999999883
No 141
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.84 E-value=5.7e-08 Score=94.30 Aligned_cols=144 Identities=21% Similarity=0.251 Sum_probs=103.5
Q ss_pred CCCCCceEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc----hhHHHHHHCCcEEEEEccc
Q 010654 226 FDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIR 301 (505)
Q Consensus 226 ~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~d~r 301 (505)
+....+..|...+.+.||.-+ ..--.|... ++.|+|++.||-..++..+.-+ ...-.|+++||-|..-|.|
T Consensus 41 i~~~gy~~E~h~V~T~DgYiL-~lhRIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R 115 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTEDGYIL-TLHRIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR 115 (403)
T ss_pred HHHcCCceEEEEEEccCCeEE-EEeeecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc
Confidence 344578899999999999833 333445432 7889999999976665443222 1223678899999999999
Q ss_pred CCCCCchhHHHcccc--------cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC---ceeEE
Q 010654 302 GGGELGRQWYENGKF--------LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAA 370 (505)
Q Consensus 302 G~~~~g~~~~~~~~~--------~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~---~~~a~ 370 (505)
| ..|.++....... .+.+-...|+.+.++++.+.- ..+++..+|||.|+.....++..+|+ .++.+
T Consensus 116 G-n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~ 192 (403)
T KOG2624|consen 116 G-NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSF 192 (403)
T ss_pred C-cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhhee
Confidence 9 5565554322211 122346789999999998763 45899999999999988888887776 57777
Q ss_pred EecCCch
Q 010654 371 VAAVPFV 377 (505)
Q Consensus 371 v~~~~~~ 377 (505)
++.+|+.
T Consensus 193 ~aLAP~~ 199 (403)
T KOG2624|consen 193 IALAPAA 199 (403)
T ss_pred eeecchh
Confidence 8877765
No 142
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.77 E-value=3.1e-08 Score=93.14 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchh-HHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSS-RLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~-~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
...|++|++||..+... ..|... ...+.+ .+|.|+.+|+++..... +..+. ..-....+++...+++|.+...
T Consensus 34 ~~~p~vilIHG~~~~~~-~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~--~~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSGE-ESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAV--NNTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCCC-CcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHH--HhHHHHHHHHHHHHHHHHHhcC
Confidence 45689999999766542 233322 333444 68999999999763221 11110 0011223577778888887755
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
++.+++.++|||+||.++..++.+.|++++.++...|..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 677899999999999999999999999999999887754
No 143
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.74 E-value=1.8e-07 Score=84.62 Aligned_cols=113 Identities=18% Similarity=0.203 Sum_probs=75.3
Q ss_pred CCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC--------------chhHHHcc--cccCC---
Q 010654 259 LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL--------------GRQWYENG--KFLKK--- 319 (505)
Q Consensus 259 ~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~--------------g~~~~~~~--~~~~~--- 319 (505)
+++++|+||+-||-.+++. -|+.....||++||+|+++..|-...- -..|...- .....
T Consensus 114 k~~k~PvvvFSHGLggsRt--~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSRT--LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCccEEEEecccccchh--hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 3678999999999766543 366667899999999999999976521 11221100 00000
Q ss_pred ---c---chHHHHHHHHHHHHH---------------------cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe
Q 010654 320 ---K---NTFTDFIACAEYLIK---------------------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 372 (505)
Q Consensus 320 ---~---~~~~D~~~~~~~l~~---------------------~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~ 372 (505)
+ .-..++..|+.-|.+ ++.+|..+++|+|||+||..+++..+.+. .|+|+|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeee
Confidence 0 123455555554433 23477889999999999999998888654 7888887
Q ss_pred cC
Q 010654 373 AV 374 (505)
Q Consensus 373 ~~ 374 (505)
.-
T Consensus 271 lD 272 (399)
T KOG3847|consen 271 LD 272 (399)
T ss_pred ee
Confidence 53
No 144
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.73 E-value=1.5e-07 Score=85.88 Aligned_cols=194 Identities=13% Similarity=0.035 Sum_probs=113.0
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC----CcEEEEEcccCCCCCchhHHHcccccCCc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR----GFIFAIAQIRGGGELGRQWYENGKFLKKK 320 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~~~~g~~~~~~~~~~~~~ 320 (505)
+....+++|+++ .+..++|++++.||-...+...- ......|++. .-+++.+|+--......++ ....
T Consensus 81 ~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~g~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~------~~n~ 152 (299)
T COG2382 81 ERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRSGRI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREEL------HCNE 152 (299)
T ss_pred ceeEEEEeCCCC-CccccccEEEEeccHHHHhcCCh-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHHh------cccH
Confidence 344567899998 77889999999998543222211 1123345554 4467777763211111111 1111
Q ss_pred chHHHHHH-HHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccc
Q 010654 321 NTFTDFIA-CAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 397 (505)
Q Consensus 321 ~~~~D~~~-~~~~l~~~~--~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 397 (505)
.....+.. .+=++.+.- .-++++-+++|.|+||..+++++.++|++|..+++.+|.+++.-. + .. .+
T Consensus 153 ~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~--~-~~-------~~ 222 (299)
T COG2382 153 AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPL--D-TQ-------PQ 222 (299)
T ss_pred HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCcc--c-cc-------cc
Confidence 12222222 223333331 245567779999999999999999999999999999998775321 1 10 00
Q ss_pred cCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 398 WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 398 ~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
. +....+ +-.+.+.+... -++...++.+... ...+++++.|++.|.++.+-.|+ | ||-.
T Consensus 223 ~------~~~~~l---~~~~a~~~~~~-~~l~~g~~~~~~~--~pNr~L~~~L~~~g~~~~yre~~---G-gHdw 281 (299)
T COG2382 223 G------EVAESL---KILHAIGTDER-IVLTTGGEEGDFL--RPNRALAAQLEKKGIPYYYREYP---G-GHDW 281 (299)
T ss_pred c------chhhhh---hhhhccCccce-EEeecCCcccccc--chhHHHHHHHHhcCCcceeeecC---C-CCch
Confidence 0 001111 11222222223 3666666666666 45678999999999998777776 5 8943
No 145
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.66 E-value=9.7e-07 Score=81.71 Aligned_cols=214 Identities=16% Similarity=0.150 Sum_probs=122.3
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.+.|.++.+||-.++.. .|......|+.. |--|+.+|.|-+|.+... .........+|+...++........
T Consensus 50 ~~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred CCCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCccc-----cccCHHHHHHHHHHHHHHccccccc
Confidence 56899999999887653 355555566554 778999999977754321 1222334556666666665543233
Q ss_pred CCCcEEEEeeChHH-HHHHHHHhhCCCceeEEEe--cCCc-h--------hhhhhcc--CCCC---CC------------
Q 010654 340 TKEKLCIEGRSAGG-LLIGAVLNMRPDLFKAAVA--AVPF-V--------DVLTTML--DPTI---PL------------ 390 (505)
Q Consensus 340 d~~rv~i~G~S~GG-~~~~~~~~~~p~~~~a~v~--~~~~-~--------d~~~~~~--~~~~---~~------------ 390 (505)
.++.|.|||||| -+++......|++..-++. .+|. . .....+. +... +.
T Consensus 123 --~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 123 --DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred --CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 468899999999 6666666667876544332 2331 0 0111110 0010 00
Q ss_pred ---Ccccc-------------ccc-CCC-CCHHHHHHHHhCChhhcc--cCCCCCeEEEEccCCCCCCCCChHHHHHHHH
Q 010654 391 ---TTAEW-------------EEW-GDP-WKEEFYFYMKSYSPVDNV--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKL 450 (505)
Q Consensus 391 ---~~~~~-------------~~~-g~~-~~~~~~~~~~~~sp~~~~--~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L 450 (505)
....| ..| ++. .-.+.+..+...++-... .....| +|+++|.++..||.++-.++.+.+
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~p-vlfi~g~~S~fv~~~~~~~~~~~f 279 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGP-VLFIKGLQSKFVPDEHYPRMEKIF 279 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccc-eeEEecCCCCCcChhHHHHHHHhc
Confidence 00000 000 011 011222222122322222 444676 999999999999988777776655
Q ss_pred HhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 010654 451 REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 493 (505)
.. +++..++ ++||+...+.++.+.. .+..|+.++
T Consensus 280 p~----~e~~~ld---~aGHwVh~E~P~~~~~--~i~~Fl~~~ 313 (315)
T KOG2382|consen 280 PN----VEVHELD---EAGHWVHLEKPEEFIE--SISEFLEEP 313 (315)
T ss_pred cc----hheeecc---cCCceeecCCHHHHHH--HHHHHhccc
Confidence 44 6777887 7899988777776544 356687654
No 146
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.64 E-value=2.5e-07 Score=82.06 Aligned_cols=117 Identities=19% Similarity=0.225 Sum_probs=86.2
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHH
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT 324 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 324 (505)
..+..++.|... +.+|+|++.||..-. ...|....+.+++.||+|+.|+.-.. ....+..+++
T Consensus 32 PkpLlI~tP~~~----G~yPVilF~HG~~l~--ns~Ys~lL~HIASHGfIVVAPQl~~~-----------~~p~~~~Ei~ 94 (307)
T PF07224_consen 32 PKPLLIVTPSEA----GTYPVILFLHGFNLY--NSFYSQLLAHIASHGFIVVAPQLYTL-----------FPPDGQDEIK 94 (307)
T ss_pred CCCeEEecCCcC----CCccEEEEeechhhh--hHHHHHHHHHHhhcCeEEEechhhcc-----------cCCCchHHHH
Confidence 566777777654 889999999997533 33355566788999999999987532 1244557789
Q ss_pred HHHHHHHHHHHc--------CCCCCCcEEEEeeChHHHHHHHHHhhCC-C-ceeEEEecCCchh
Q 010654 325 DFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRP-D-LFKAAVAAVPFVD 378 (505)
Q Consensus 325 D~~~~~~~l~~~--------~~~d~~rv~i~G~S~GG~~~~~~~~~~p-~-~~~a~v~~~~~~d 378 (505)
+..++++||.+. -..+.++++++|||.||..+.++|..+. + .|.+.|..-|+.-
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 999999999763 1256689999999999999988887652 2 3677777776543
No 147
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.61 E-value=9.9e-07 Score=88.60 Aligned_cols=87 Identities=16% Similarity=0.083 Sum_probs=61.1
Q ss_pred hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcc-hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH---
Q 010654 283 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKN-TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA--- 358 (505)
Q Consensus 283 ~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~--- 358 (505)
...++|.++||.|++++.|.-+...+ .++-. -++.+.+|++.+.+. ...++|-++|+|+||.+++.
T Consensus 238 SlVr~lv~qG~~VflIsW~nP~~~~r--------~~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~~a 307 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRNPDKAHR--------EWGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAALVG 307 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCCCChhhc--------CCCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHHHH
Confidence 35689999999999999987543221 12111 124566777777665 23478999999999999886
Q ss_pred -HHhhCCC-ceeEEEecCCchhh
Q 010654 359 -VLNMRPD-LFKAAVAAVPFVDV 379 (505)
Q Consensus 359 -~~~~~p~-~~~a~v~~~~~~d~ 379 (505)
+++.+++ +++.++.....+|+
T Consensus 308 ~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 308 HLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHhcCCCCceeeEEeeeccccc
Confidence 6677775 78888876665553
No 148
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.61 E-value=9.9e-07 Score=76.06 Aligned_cols=115 Identities=22% Similarity=0.190 Sum_probs=81.0
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 417 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~ 417 (505)
.++++||+|.|.|+||.+++.++..++-...+.+...++..-... +.|..+ |-.
T Consensus 89 Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------------~~~~~~----------~~~ 142 (206)
T KOG2112|consen 89 GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------------GLPGWL----------PGV 142 (206)
T ss_pred CCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------------hccCCc----------ccc
Confidence 478899999999999999999998876544444444443321100 001000 000
Q ss_pred cccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 418 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 418 ~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
+ .+ |++..||+.|+.||..-.++..+.|+..+..+++..|+ +-+|... .+ ++..+..|+.+
T Consensus 143 ~----~~-~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~---g~~h~~~---~~---e~~~~~~~~~~ 203 (206)
T KOG2112|consen 143 N----YT-PILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYP---GLGHSTS---PQ---ELDDLKSWIKT 203 (206)
T ss_pred C----cc-hhheecccCCceeehHHHHHHHHHHHHcCCceeeeecC---Ccccccc---HH---HHHHHHHHHHH
Confidence 0 34 59999999999999999999999999999998888887 8899643 22 33446778766
No 149
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.60 E-value=4.2e-07 Score=78.54 Aligned_cols=153 Identities=18% Similarity=0.210 Sum_probs=85.1
Q ss_pred EEEEcCCCCcCCCCCCchhH-HHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCc
Q 010654 266 LLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEK 343 (505)
Q Consensus 266 iv~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~r 343 (505)
|+.+||-.++.. ..|.... +.|... +.|-.+|.- .-..++ .+..|.+. ..+| +.
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~~-~~V~~~~~~------------------~P~~~~---W~~~l~~~i~~~~-~~ 56 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLENS-VRVEQPDWD------------------NPDLDE---WVQALDQAIDAID-EP 56 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTTS-EEEEEC--T------------------S--HHH---HHHHHHHCCHC-T-TT
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCCC-eEEeccccC------------------CCCHHH---HHHHHHHHHhhcC-CC
Confidence 567788655443 4455433 344444 666665531 112233 33344333 1234 45
Q ss_pred EEEEeeChHHHHHHHHH-hhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCC
Q 010654 344 LCIEGRSAGGLLIGAVL-NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQ 422 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~-~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~ 422 (505)
+.++|||.|+.+++.++ .+....++++++.+|+..-.... ..+ ....+.. .|.. .+
T Consensus 57 ~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~---~~~----~~~~f~~-------------~p~~---~l 113 (171)
T PF06821_consen 57 TILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP---FPP----ELDGFTP-------------LPRD---PL 113 (171)
T ss_dssp EEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC---CTC----GGCCCTT-------------SHCC---HH
T ss_pred eEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc---hhh----hcccccc-------------Cccc---cc
Confidence 88999999999999998 76778999999999974310110 000 0011111 0111 11
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
..| .+++.+++|+.||+..+.+++++|.. +++.++ ++||....
T Consensus 114 ~~~-~~viaS~nDp~vp~~~a~~~A~~l~a-----~~~~~~---~~GHf~~~ 156 (171)
T PF06821_consen 114 PFP-SIVIASDNDPYVPFERAQRLAQRLGA-----ELIILG---GGGHFNAA 156 (171)
T ss_dssp HCC-EEEEEETTBSSS-HHHHHHHHHHHT------EEEEET---S-TTSSGG
T ss_pred CCC-eEEEEcCCCCccCHHHHHHHHHHcCC-----CeEECC---CCCCcccc
Confidence 344 58889999999999999999999854 467777 88997543
No 150
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.59 E-value=2.1e-06 Score=80.77 Aligned_cols=113 Identities=17% Similarity=0.141 Sum_probs=71.5
Q ss_pred CCCcEEEEEcCCCCcCCCC--------CCchhH----HHHHHCCcEEEEEcccCCC-CC-chhHHHcccc----cCCcch
Q 010654 261 GSDPLLLYGYGSYEICNDP--------AFNSSR----LSLLDRGFIFAIAQIRGGG-EL-GRQWYENGKF----LKKKNT 322 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~--------~~~~~~----~~l~~~G~~v~~~d~rG~~-~~-g~~~~~~~~~----~~~~~~ 322 (505)
.+..+||++|+-.+.+... +|-... +.+--.-|-|++.|.-|+. |. |..-....-+ ......
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 4567899999865533221 122110 1233334899999998876 32 2211111101 112367
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
+.|...+-+.|+++-.| ++++ |+|.||||..++..+..+||+...++..+.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 88999888888776445 4554 899999999999999999998777665544
No 151
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.57 E-value=9.9e-07 Score=77.40 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=110.6
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCC-chhHHHcccc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGKF 316 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~-g~~~~~~~~~ 316 (505)
+.-.+|..|..|-..|+.. ...+.|.||..-|.... ...|-....+|+.+||.|+.+|.--+-|. ...-. .
T Consensus 7 i~~~~~~~I~vwet~P~~~--~~~~~~tiliA~Gf~rr--mdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~----e 78 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNN--EPKRNNTILIAPGFARR--MDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN----E 78 (294)
T ss_dssp EEETTTEEEEEEEE---TT--S---S-EEEEE-TT-GG--GGGGHHHHHHHHTTT--EEEE---B---------------
T ss_pred eEcCCCCEEEEeccCCCCC--CcccCCeEEEecchhHH--HHHHHHHHHHHhhCCeEEEeccccccccCCCCChh----h
Confidence 3456899999997777753 45667888888664332 22355666799999999999996433221 01000 0
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhcc---CCC-CCCCc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPT-IPLTT 392 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~-~~~~~ 392 (505)
..-.....|+..+++||.++|. .++|++..|..|-++...++. ++ ..-.|...|+.|+...+. ..+ +....
T Consensus 79 ftms~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~~~i 153 (294)
T PF02273_consen 79 FTMSIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQLPI 153 (294)
T ss_dssp --HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGGS-G
T ss_pred cchHHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhhcch
Confidence 0111345889999999998875 679999999999999999984 54 566777779988755431 000 00000
Q ss_pred ccc---ccc-CCCCCHHHH--HHHH-h----CChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEE
Q 010654 393 AEW---EEW-GDPWKEEFY--FYMK-S----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 461 (505)
Q Consensus 393 ~~~---~~~-g~~~~~~~~--~~~~-~----~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~ 461 (505)
... ..+ |..-+.+.+ +.+. . .|-...++.+.+| ++.+++.+|..|...+..++...+... .+++..
T Consensus 154 ~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP-~iaF~A~~D~WV~q~eV~~~~~~~~s~--~~klys 230 (294)
T PF02273_consen 154 EQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIP-FIAFTANDDDWVKQSEVEELLDNINSN--KCKLYS 230 (294)
T ss_dssp GG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S--EEEEEETT-TTS-HHHHHHHHTT-TT----EEEEE
T ss_pred hhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCC-EEEEEeCCCccccHHHHHHHHHhcCCC--ceeEEE
Confidence 000 001 111111111 0110 1 1345667888898 999999999999776666665544432 233344
Q ss_pred EEecCCCCCCCCCCh
Q 010654 462 FKCELGAGHFSKSGR 476 (505)
Q Consensus 462 ~~~~~~~gH~~~~~~ 476 (505)
++ |..|-..++.
T Consensus 231 l~---Gs~HdL~enl 242 (294)
T PF02273_consen 231 LP---GSSHDLGENL 242 (294)
T ss_dssp ET---T-SS-TTSSH
T ss_pred ec---CccchhhhCh
Confidence 44 9999877654
No 152
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=3.4e-07 Score=81.78 Aligned_cols=117 Identities=19% Similarity=0.148 Sum_probs=79.3
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhH
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQW 310 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~ 310 (505)
..+.+.+...|+ .+..++..|+. ...|++++.|||..+..+ |......+..+ -..++++|.||+|+.--+-
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~~-----t~gpil~l~HG~G~S~LS--fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~ 120 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPSA-----TEGPILLLLHGGGSSALS--FAIFASELKSKIRCRCLALDLRGHGETKVEN 120 (343)
T ss_pred cccccccCCCcc-eEEEEEecCCC-----CCccEEEEeecCcccchh--HHHHHHHHHhhcceeEEEeeccccCccccCC
Confidence 345555555555 46666555542 457999999998766544 55556666664 6678999999999753322
Q ss_pred HHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 311 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 311 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.. .........|+.+.++++-.. ++.+|.++||||||.++...+..
T Consensus 121 e~---dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 121 ED---DLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred hh---hcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 11 122335568888877777643 34679999999999999887764
No 153
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.55 E-value=7.9e-06 Score=66.81 Aligned_cols=165 Identities=19% Similarity=0.219 Sum_probs=96.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCC--CCchhHHHcccccCCcc-hHHHHHHHHHHHHHcCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKKN-TFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~ 339 (505)
.-+||+.||...+..++........|+.+|+.|+..++.--. ..|. . +...+.. .-...+.++..|....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~---r--kPp~~~~t~~~~~~~~~aql~~~l-- 86 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGR---R--KPPPGSGTLNPEYIVAIAQLRAGL-- 86 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccC---C--CCcCccccCCHHHHHHHHHHHhcc--
Confidence 346677899888877776666678999999999999864111 1110 0 0011111 1233344555565543
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec-CCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhc
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDN 418 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~ 418 (505)
+..++.|.|+||||-++..++..--..+.+.++. +|+. --|.|+.. -..+
T Consensus 87 ~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh-------------------ppGKPe~~----------Rt~H 137 (213)
T COG3571 87 AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH-------------------PPGKPEQL----------RTEH 137 (213)
T ss_pred cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC-------------------CCCCcccc----------hhhh
Confidence 4467999999999998877765321123333322 2211 01333221 1346
Q ss_pred ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 419 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 419 ~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
+..+++| +||.||+.|+.-.-.+. +.. ....+.+++++. ++.|-.
T Consensus 138 L~gl~tP-tli~qGtrD~fGtr~~V---a~y--~ls~~iev~wl~---~adHDL 182 (213)
T COG3571 138 LTGLKTP-TLITQGTRDEFGTRDEV---AGY--ALSDPIEVVWLE---DADHDL 182 (213)
T ss_pred ccCCCCC-eEEeecccccccCHHHH---Hhh--hcCCceEEEEec---cCcccc
Confidence 7788898 99999999987543333 222 223467778887 778854
No 154
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.54 E-value=7.4e-07 Score=87.84 Aligned_cols=112 Identities=8% Similarity=-0.014 Sum_probs=75.5
Q ss_pred CCCcEEEEEcCCCCcCCCCCCch-hHHHHHH--CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD--RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
...|++|++||.........|.. ....|.. ..|.|+++|.+|.+.... ..+. ..-...-.++.+.+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y--~~a~--~~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY--PTSA--AYTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC--cccc--ccHHHHHHHHHHHHHHHHHhh
Confidence 44689999999765432223443 2334443 369999999998764321 1110 011122356667777776553
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.++.+++.++|||+||.++..++...|+++..++...|.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 357789999999999999999999889999988887774
No 155
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.51 E-value=1.8e-06 Score=80.26 Aligned_cols=100 Identities=19% Similarity=0.142 Sum_probs=63.6
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHC--CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
.|.|+++||++........ ....+... .|.|+.+|.||+|... . . ..........+..+.+.-..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~g~g~s~-~-------~--~~~~~~~~~~~~~~~~~~~~- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRP--VFKVLPALAARYRVIAPDLRGHGRSD-P-------A--GYSLSAYADDLAALLDALGL- 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHH--HHHHhhccccceEEEEecccCCCCCC-c-------c--cccHHHHHHHHHHHHHHhCC-
Confidence 4599999999865443322 11222221 1999999999888764 0 0 01111112223333332122
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
.++.++|+|+||.++..++.++|+.++.++...+.
T Consensus 88 -~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 88 -EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred -CceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 34899999999999999999999999988887754
No 156
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.48 E-value=7.1e-06 Score=78.18 Aligned_cols=184 Identities=13% Similarity=0.108 Sum_probs=109.9
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEe-c---cccceEEEEEeCCCCCceeeeecc-cccee-EE
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIAS-E---SKITRFVFYLDVSKPEELRVLTPR-VVGVD-TA 82 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~-~---~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~-~~ 82 (505)
.||.|.|+++ +..+|.. +-.....+.+||||++|+|+. . +.+..+||+++.++|+ ++++|-- ..... ..
T Consensus 60 dlWe~slk~g--~~~ritS--~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge-~kRiTyfGr~fT~VaG 134 (668)
T COG4946 60 DLWEYSLKDG--KPLRITS--GLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGE-AKRITYFGRRFTRVAG 134 (668)
T ss_pred HHHHhhhccC--CeeEEec--ccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCc-EEEEEEeccccceeec
Confidence 4788889875 3455553 233445788999999999953 2 3357899999999997 8877622 11222 23
Q ss_pred eeeeCCEEEEEEcCCCC-CCceEEEeeCCCC-------------------------------------C--CceEEEcCC
Q 010654 83 ASHRGNHFFITRRSDEL-FNSELLACPVDNT-------------------------------------S--ETTVLIPHR 122 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~-~~~~l~~~~~~~~-------------------------------------~--~~~~~~~~~ 122 (505)
|+|||+-|+...-.... ....||.+.+++. | ..-|.-...
T Consensus 135 ~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkGGtrGklWis~d~ 214 (668)
T COG4946 135 WIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKGGTRGKLWISSDG 214 (668)
T ss_pred cCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccCCccceEEEEecC
Confidence 99999755544322211 1234555544331 0 112311111
Q ss_pred C---------CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEE
Q 010654 123 E---------SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 193 (505)
Q Consensus 123 ~---------~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (505)
. +..++.....+++++|....+|..+++..+++ |..++. ...|++ |.. -+.+.||++++|
T Consensus 215 g~tFeK~vdl~~~vS~PmIV~~RvYFlsD~eG~GnlYSvdld--GkDlrr-----HTnFtd--YY~--R~~nsDGkrIvF 283 (668)
T COG4946 215 GKTFEKFVDLDGNVSSPMIVGERVYFLSDHEGVGNLYSVDLD--GKDLRR-----HTNFTD--YYP--RNANSDGKRIVF 283 (668)
T ss_pred CcceeeeeecCCCcCCceEEcceEEEEecccCccceEEeccC--Cchhhh-----cCCchh--ccc--cccCCCCcEEEE
Confidence 1 11223344556889999999998888766665 554422 112222 222 244568999999
Q ss_pred EEecCCCCceEEEEECCCCc
Q 010654 194 HYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~ 213 (505)
... ..||++|+.+.+
T Consensus 284 q~~-----GdIylydP~td~ 298 (668)
T COG4946 284 QNA-----GDIYLYDPETDS 298 (668)
T ss_pred ecC-----CcEEEeCCCcCc
Confidence 865 679999988766
No 157
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.47 E-value=1.3e-06 Score=83.45 Aligned_cols=236 Identities=16% Similarity=0.114 Sum_probs=122.2
Q ss_pred ceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchH
Q 010654 244 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 323 (505)
Q Consensus 244 ~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 323 (505)
..+.+.+..|+.. ...++.|.++..||.......... ....+++.++.++..+....++.+...+...... ...
T Consensus 31 ~~~~~~l~~p~~~-~~~~~~p~v~~~h~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~ 104 (299)
T COG1073 31 IALAAVLHLPPSG-NEEKKLPAVVFLHGFGSSKEQSLG--YAVLLAEKGYRVLAGDASLFGESGGDPRGLADSE---GYA 104 (299)
T ss_pred ceeeeEEEecCCC-CccccCceEEeccCccccccCcch--HHHHhhhceeEEeeeccccccccccccccccCcc---ccc
Confidence 5677888888876 444689999999997654433221 4567888899888776522111111100000000 000
Q ss_pred HHHHH---------HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCC-----chh--------
Q 010654 324 TDFIA---------CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVP-----FVD-------- 378 (505)
Q Consensus 324 ~D~~~---------~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~-----~~d-------- 378 (505)
.++.. .+..-.........+....|.+.|+..+..++...+ +..+.++...+ ...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~ 184 (299)
T COG1073 105 EDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPEL 184 (299)
T ss_pred cccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHH
Confidence 00000 000000001112256777788877777666665544 12111111111 000
Q ss_pred ---hhhhccCCCCCCCcc--cccccCCCCCHHHHHHHHhCChhhcccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHh
Q 010654 379 ---VLTTMLDPTIPLTTA--EWEEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLRE 452 (505)
Q Consensus 379 ---~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~ 452 (505)
....+.. ....... ....+..+... ...+...++...+.++. .| +|++||..|..||..++..++.+.+.
T Consensus 185 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~i~~~P-~l~~~G~~D~~vp~~~~~~~~~~~~~ 260 (299)
T COG1073 185 ARELIDYLIT-PGGFAPLPAPEAPLDTLPLR--AVLLLLLDPFDDAEKISPRP-VLLVHGERDEVVPLRDAEDLYEAARE 260 (299)
T ss_pred HHhhhhhhcc-CCCCCCCCcccccccccccc--hhhhccCcchhhHhhcCCcc-eEEEecCCCcccchhhhHHHHhhhcc
Confidence 0000000 0000000 00001111111 11235567777777776 67 99999999999999999999999887
Q ss_pred cCCCCCeEEEEecCCCCCCCCC-ChHHHHHHHHHHHHHHHHhh
Q 010654 453 MKTDDNILLFKCELGAGHFSKS-GRFERLREAAFTYTFLMRAL 494 (505)
Q Consensus 453 ~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l 494 (505)
. +.+.+.++ +.+|.... ...........+.+||.+++
T Consensus 261 ~--~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 261 R--PKKLLFVP---GGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred C--CceEEEec---CCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 6 55667777 66786543 22332344556889998876
No 158
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.47 E-value=1.3e-05 Score=75.41 Aligned_cols=123 Identities=15% Similarity=0.075 Sum_probs=77.4
Q ss_pred EEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHH-------cccccCCc
Q 010654 248 ICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE-------NGKFLKKK 320 (505)
Q Consensus 248 ~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~-------~~~~~~~~ 320 (505)
..++.|+.. + ..+.|++|++.|................|++.|++.+....+-.|..-.+-.. ......+.
T Consensus 79 ~~~~~P~~~-~-~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 79 FQLLLPKRW-D-SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred EEEEECCcc-c-cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 344667653 1 24579999988754322111112224567778998888876544332111100 00111223
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
..+.+....+.|+.++|+ .++||.|.||||+++..+++..|....++-+.++
T Consensus 157 ~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 157 ATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 567788889999999976 5999999999999999999988886555544433
No 159
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.44 E-value=1.3e-05 Score=78.58 Aligned_cols=199 Identities=15% Similarity=0.206 Sum_probs=117.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCc--------------e--EEEEEEeCCCcEEEEEeccc----------------
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDI--------------Y--SLGLQASESKKFLFIASESK---------------- 53 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~--------------~--~~~~~~SpDg~~i~~~~~~~---------------- 53 (505)
|...||+.++.++ +.+.|.....+. + ....-|||||++|+|..-+.
T Consensus 61 ~~~nly~~~~~~~--~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~ 138 (353)
T PF00930_consen 61 RDNNLYLRDLATG--QETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS 138 (353)
T ss_dssp ETTEEEEESSTTS--EEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE
T ss_pred ecCceEEEECCCC--CeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc
Confidence 4567999998765 344444321111 1 12356999999999986320
Q ss_pred -----------------cceEEEEEeCCCCCceeeeecc-----cccee--EEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 54 -----------------ITRFVFYLDVSKPEELRVLTPR-----VVGVD--TAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 54 -----------------~~~~l~~~d~~~~~~~~~l~~~-----~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
...+|+++|+++++ ...+... .+... ..|++|+++|++...........|+++|.
T Consensus 139 ~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~-~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~ 217 (353)
T PF00930_consen 139 QYPEVESIRYPKAGDPNPRVSLFVVDLASGK-TTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDA 217 (353)
T ss_dssp SS-EEEEEE--BTTS---EEEEEEEESSSTC-CCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEE
T ss_pred cCCcccccccCCCCCcCCceEEEEEECCCCc-EEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEEC
Confidence 03479999999886 4333322 11111 23999999676665432345578899998
Q ss_pred CCCCCceEEEcCCCCcee---eEEEEe---CCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeec-CC
Q 010654 110 DNTSETTVLIPHRESVKL---QDIQLF---IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID-PS 182 (505)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i---~~~~~~---~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~ 182 (505)
++ +..++++.+..+..+ ..+.+. ++.+++...++|..+|++++.+ ++.+++|+.|. +.+. ..
T Consensus 218 ~t-g~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~--~~~~~~lT~G~--------~~V~~i~ 286 (353)
T PF00930_consen 218 ST-GETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLD--GGKPRQLTSGD--------WEVTSIL 286 (353)
T ss_dssp CT-TTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETT--SSEEEESS-SS--------S-EEEEE
T ss_pred CC-CceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccc--ccceeccccCc--------eeecccc
Confidence 76 555554433322222 234433 4577777779999999999876 44455555432 2221 12
Q ss_pred CCcccCCEEEEEEecCCCCc--eEEEEECC-CCcEEEEEEee
Q 010654 183 ESVFSSRILRFHYSSLRTPP--SVYDYDMD-MGISVLKKIET 221 (505)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~p~--~~~~~~~~-~~~~~~~~~~~ 221 (505)
.++.+++.++|+++... |. .||+++++ +++ ++.++.
T Consensus 287 ~~d~~~~~iyf~a~~~~-p~~r~lY~v~~~~~~~--~~~LT~ 325 (353)
T PF00930_consen 287 GWDEDNNRIYFTANGDN-PGERHLYRVSLDSGGE--PKCLTC 325 (353)
T ss_dssp EEECTSSEEEEEESSGG-TTSBEEEEEETTETTE--EEESST
T ss_pred eEcCCCCEEEEEecCCC-CCceEEEEEEeCCCCC--eEeccC
Confidence 34667888988888733 43 79999998 665 444443
No 160
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.42 E-value=4.8e-06 Score=73.86 Aligned_cols=202 Identities=19% Similarity=0.172 Sum_probs=106.9
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC-C
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY-C 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~ 339 (505)
.+.-++.+.|-|.++.. |......|.. -+.++.+.++|.+.. .+.....|+.+.++.+...-. .
T Consensus 6 ~~~~L~cfP~AGGsa~~---fr~W~~~lp~-~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el~~~ 70 (244)
T COG3208 6 ARLRLFCFPHAGGSASL---FRSWSRRLPA-DIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANELLPP 70 (244)
T ss_pred CCceEEEecCCCCCHHH---HHHHHhhCCc-hhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHhccc
Confidence 44456666676654432 2222222221 378999999987642 112334566666666655422 1
Q ss_pred CC-CcEEEEeeChHHHHHHHHHhhC------CCceeEEEecCCchhhhhhccCCCCCCCcccc----ccc-CCC----CC
Q 010654 340 TK-EKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW----EEW-GDP----WK 403 (505)
Q Consensus 340 d~-~rv~i~G~S~GG~~~~~~~~~~------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~----~~~-g~~----~~ 403 (505)
.+ ...+++||||||.++.-++.+. |.-+-...+.+|..+-... ........+ .++ |.| +|
T Consensus 71 ~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~----i~~~~D~~~l~~l~~lgG~p~e~led 146 (244)
T COG3208 71 LLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQ----IHHLDDADFLADLVDLGGTPPELLED 146 (244)
T ss_pred cCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCC----ccCCCHHHHHHHHHHhCCCChHHhcC
Confidence 22 4699999999999988877542 2222223333442221111 111112222 122 444 35
Q ss_pred HHHHHHHH--------hCChhhc--ccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 404 EEFYFYMK--------SYSPVDN--VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 404 ~~~~~~~~--------~~sp~~~--~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
++....+. ...-+.+ -..+.+| +.++.|++|..|...+...+.+. .+...++.+|+ +||++.
T Consensus 147 ~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~p-i~~~~G~~D~~vs~~~~~~W~~~---t~~~f~l~~fd----GgHFfl 218 (244)
T COG3208 147 PELMALFLPILRADFRALESYRYPPPAPLACP-IHAFGGEKDHEVSRDELGAWREH---TKGDFTLRVFD----GGHFFL 218 (244)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCcCcc-eEEeccCcchhccHHHHHHHHHh---hcCCceEEEec----Ccceeh
Confidence 55443322 0111111 1345787 99999999999966554444333 34478888996 589875
Q ss_pred CChHHHHHHHHHHHHHHHHhhC
Q 010654 474 SGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 474 ~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.... ..+++++.++++
T Consensus 219 ~~~~------~~v~~~i~~~l~ 234 (244)
T COG3208 219 NQQR------EEVLARLEQHLA 234 (244)
T ss_pred hhhH------HHHHHHHHHHhh
Confidence 3221 235667776664
No 161
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.38 E-value=1.1e-06 Score=79.49 Aligned_cols=170 Identities=18% Similarity=0.149 Sum_probs=77.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCch----hHHHHHHCCcEEEEEcccCCC----CCchh-------HH-HcccccCCc-----
Q 010654 262 SDPLLLYGYGSYEICNDPAFNS----SRLSLLDRGFIFAIAQIRGGG----ELGRQ-------WY-ENGKFLKKK----- 320 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~----~~~~l~~~G~~v~~~d~rG~~----~~g~~-------~~-~~~~~~~~~----- 320 (505)
+.+-||++||...+.. -|.. ....|.+.++-.+.+|-+-.- +.... .. ......|..
T Consensus 3 ~k~riLcLHG~~~na~--if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE--IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HH--HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHH--HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 4688999999765422 1222 223443337888888753211 11000 10 111122221
Q ss_pred chHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCchhhhhhccCCCC
Q 010654 321 NTFTDFIACAEYLIK----NCYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDVLTTMLDPTI 388 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~~~~~~~~~~ 388 (505)
....++..++++|.+ +|- =.||+|+|.||.+++.++... ...|+.+|..+|+.-....
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------ 150 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------ 150 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------
T ss_pred ccccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------
Confidence 234555555555544 342 368999999999988877531 1257888888775431110
Q ss_pred CCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCC
Q 010654 389 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 468 (505)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 468 (505)
+ .......++++| +|.++|.+|..++++.++++++..... .+ ++.. .+
T Consensus 151 ------~------------------~~~~~~~~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~~---~~--v~~h--~g 198 (212)
T PF03959_consen 151 ------Y------------------QELYDEPKISIP-TLHVIGENDPVVPPERSEALAEMFDPD---AR--VIEH--DG 198 (212)
T ss_dssp ------G------------------TTTT--TT---E-EEEEEETT-SSS-HHHHHHHHHHHHHH---EE--EEEE--SS
T ss_pred ------h------------------hhhhccccCCCC-eEEEEeCCCCCcchHHHHHHHHhccCC---cE--EEEE--CC
Confidence 0 000012344676 999999999999999999999998875 22 3332 57
Q ss_pred CCCCCCC
Q 010654 469 GHFSKSG 475 (505)
Q Consensus 469 gH~~~~~ 475 (505)
||..+..
T Consensus 199 GH~vP~~ 205 (212)
T PF03959_consen 199 GHHVPRK 205 (212)
T ss_dssp SSS----
T ss_pred CCcCcCC
Confidence 9987643
No 162
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.35 E-value=4.9e-06 Score=76.46 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=92.5
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 313 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~ 313 (505)
++.++++.||.+|...++--... ..+...-+|++.-|..+- ..-+ ....=++.||.|+-.|.+|-+|+-.-
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n-~~~ngq~LvIC~EGNAGF-YEvG---~m~tP~~lgYsvLGwNhPGFagSTG~---- 285 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPN-QSGNGQDLVICFEGNAGF-YEVG---VMNTPAQLGYSVLGWNHPGFAGSTGL---- 285 (517)
T ss_pred eEEEEeecCCcchhheeecCCCC-CCCCCceEEEEecCCccc-eEee---eecChHHhCceeeccCCCCccccCCC----
Confidence 56677889999998765443322 122224566666653321 0000 01223577999999999987765221
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh
Q 010654 314 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 381 (505)
Q Consensus 314 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 381 (505)
....++...+.+++++.+..-...++.|.++|||-||+.++|+|..+|| ++|+|..+.+-|++.
T Consensus 286 ---P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllp 349 (517)
T KOG1553|consen 286 ---PYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLP 349 (517)
T ss_pred ---CCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhh
Confidence 2233556667778888888755667899999999999999999999996 599999998877653
No 163
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.33 E-value=2.7e-05 Score=74.41 Aligned_cols=193 Identities=16% Similarity=0.073 Sum_probs=94.5
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee--EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
-+..|++||++++|.+......++|++|+++++ .++||....... ..++++++.++|..+. ..|.++|+++
T Consensus 39 ~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~-i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-----~~l~~vdL~T- 111 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDGNRNLYLLDLATGE-ITQLTDGPGDNTFGGFLSPDDRALYYVKNG-----RSLRRVDLDT- 111 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTSS-EEEEEETTT-E-EEE---SS-B-TTT-EE-TTSSEEEEEETT-----TEEEEEETTT-
T ss_pred cCCCcCCCCCEEEEEeccCCCcceEEEEcccCE-EEECccCCCCCccceEEecCCCeEEEEECC-----CeEEEEECCc-
Confidence 356899999999998887778999999999996 999997652222 3489999999888743 3899999988
Q ss_pred CCceEEEcCCCCceeeEEEEe--CC--EEEEEEec-------------------CCeeEEEEEEcCCCCCcccccCCCce
Q 010654 113 SETTVLIPHRESVKLQDIQLF--ID--HLAVYERE-------------------GGLQKITTYRLPAVGEPLKSLQGGKS 169 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~--~d--~l~~~~~~-------------------~~~~~l~~~~~~~~~~~~~~l~~~~~ 169 (505)
.+++ ++..-++...+...|. .| .++.+... +-..++..+++. ++..+.
T Consensus 112 ~e~~-~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~--tG~~~~------ 182 (386)
T PF14583_consen 112 LEER-VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLK--TGERKV------ 182 (386)
T ss_dssp --EE-EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETT--T--EEE------
T ss_pred CcEE-EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECC--CCceeE------
Confidence 4444 2222223233333442 22 33333222 112344455554 332221
Q ss_pred eeccCCeeeecCCCCcc-cCCEEEEEEecCCCC--ceEEEEECCCCcEEEEEEeeecCCCCCCCceEEEEEEECCCCcee
Q 010654 170 VEFIDPVYSIDPSESVF-SSRILRFHYSSLRTP--PSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQI 246 (505)
Q Consensus 170 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i 246 (505)
-+.+..+ +..+.++| |...+.|-.+++-+- .+||.++..+.. ..++.+. .....--..|-++||..|
T Consensus 183 -v~~~~~w-lgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~--~~~v~~~------~~~e~~gHEfw~~DG~~i 252 (386)
T PF14583_consen 183 -VFEDTDW-LGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN--VKKVHRR------MEGESVGHEFWVPDGSTI 252 (386)
T ss_dssp -EEEESS--EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS-----EESS---------TTEEEEEEEE-TTSS-E
T ss_pred -EEecCcc-ccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc--ceeeecC------CCCcccccccccCCCCEE
Confidence 1111211 11122344 456777888887765 489999976554 2222211 123444455677899988
Q ss_pred eEEEEEeC
Q 010654 247 PICIVYRK 254 (505)
Q Consensus 247 ~~~l~~p~ 254 (505)
-. ..+.+
T Consensus 253 ~y-~~~~~ 259 (386)
T PF14583_consen 253 WY-DSYTP 259 (386)
T ss_dssp EE-EEEET
T ss_pred EE-EeecC
Confidence 44 34433
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.32 E-value=2.8e-05 Score=74.48 Aligned_cols=120 Identities=22% Similarity=0.287 Sum_probs=76.5
Q ss_pred EEEEE-eCCccCCCCCCcEEEEEcCCCCcCCCCCCch----hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcch
Q 010654 248 ICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAFNS----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 322 (505)
Q Consensus 248 ~~l~~-p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~----~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~ 322 (505)
.|++. |... + .+..|+|+|+|||.-......... ....+.. ..++++.||.-...- ..+...+.+
T Consensus 108 ~Wlvk~P~~~-~-pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~-------~~~~~yPtQ 177 (374)
T PF10340_consen 108 YWLVKAPNRF-K-PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSD-------EHGHKYPTQ 177 (374)
T ss_pred EEEEeCCccc-C-CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccc-------cCCCcCchH
Confidence 46666 5543 2 234699999999853221111111 1112223 559999999755410 012344577
Q ss_pred HHHHHHHHHHHH-HcCCCCCCcEEEEeeChHHHHHHHHHhh--CC---CceeEEEecCCchhhh
Q 010654 323 FTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLIGAVLNM--RP---DLFKAAVAAVPFVDVL 380 (505)
Q Consensus 323 ~~D~~~~~~~l~-~~~~~d~~rv~i~G~S~GG~~~~~~~~~--~p---~~~~a~v~~~~~~d~~ 380 (505)
+.++.+..++|+ +.|. ++|.++|.|+||.+++.++.. ++ -.-+.+|+.+|=+++.
T Consensus 178 L~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 899999999999 5554 689999999999999887643 11 1347899999876654
No 165
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.32 E-value=0.00013 Score=70.40 Aligned_cols=154 Identities=16% Similarity=0.132 Sum_probs=103.7
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEec-CCchhhhhhcc------CCCCCCCcccccccCC---C
Q 010654 332 YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDVLTTML------DPTIPLTTAEWEEWGD---P 401 (505)
Q Consensus 332 ~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~------~~~~~~~~~~~~~~g~---~ 401 (505)
++.+...++.++..|.|.|=-|+.+..+++ .+.|++|++.. .++.|+...+. +..-+.....|...|- -
T Consensus 162 ~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 162 FLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQL 240 (367)
T ss_pred HHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhc
Confidence 334444567799999999999999988888 45688877754 45555433221 1011111112211121 1
Q ss_pred CCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHH
Q 010654 402 WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLR 481 (505)
Q Consensus 402 ~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 481 (505)
..++..+.+.-.+|+.+.++++.| -||+.|..|+...+..+.-++..|.. +..+.++| +.+|+... ..
T Consensus 241 ~tp~f~~L~~ivDP~~Y~~rL~~P-K~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vP---N~~H~~~~--~~--- 308 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPYSYRDRLTMP-KYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVP---NAGHSLIG--SD--- 308 (367)
T ss_pred CCHHHHHHHHhcCHHHHHHhcCcc-EEEEecCCCceeccCchHHHHhhCCC---CeeEEeCC---CCCcccch--HH---
Confidence 345555566778999999999998 99999999999999999999999985 33456676 89997643 22
Q ss_pred HHHHHHHHHHHhhCCCC
Q 010654 482 EAAFTYTFLMRALSMLP 498 (505)
Q Consensus 482 ~~~~~~~fl~~~l~~~~ 498 (505)
....+..|+.+.+...+
T Consensus 309 ~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 309 VVQSLRAFYNRIQNGRP 325 (367)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 23347889988765443
No 166
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.26 E-value=4.8e-06 Score=87.46 Aligned_cols=99 Identities=13% Similarity=0.056 Sum_probs=68.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHc----------cc---------ccCCcch
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN----------GK---------FLKKKNT 322 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~----------~~---------~~~~~~~ 322 (505)
..|+||++||..+... .|......|+++||.|+.+|+||+|.....-... ++ +....+.
T Consensus 448 g~P~VVllHG~~g~~~--~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE--NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCHH--HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 4689999999765433 3555667888899999999999998763220000 00 1122356
Q ss_pred HHHHHHHHHHHH------Hc----CCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLI------KN----CYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~------~~----~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
+.|+......+. +. +-.+..+|.++|||+||.++..++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 778777777665 11 12456799999999999999888875
No 167
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.22 E-value=3e-05 Score=70.16 Aligned_cols=54 Identities=24% Similarity=0.245 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 324 TDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 324 ~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
+.+..-+.=.++. --+|++|.+|+|||+||.+++.++..+|+.|....+.+|-+
T Consensus 118 ~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 118 EFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3344444433443 55889999999999999999999999999999999999843
No 168
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.18 E-value=0.00011 Score=70.26 Aligned_cols=108 Identities=8% Similarity=0.083 Sum_probs=63.5
Q ss_pred CCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEecc-cc--ceEEEEEeCCCCCceeeeeccccce
Q 010654 4 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASES-KI--TRFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 4 ~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~-~~--~~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
+.-+++|+..++.|+ +.+.|++++ .|.--+..|| |...|.|.... ++ ..+||.+|.+++. .+++.++..+.
T Consensus 164 a~p~~~i~~idl~tG--~~~~v~~~~--~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~-~~~v~~~~~~e 238 (386)
T PF14583_consen 164 ARPHCRIFTIDLKTG--ERKVVFEDT--DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN-VKKVHRRMEGE 238 (386)
T ss_dssp C---EEEEEEETTT----EEEEEEES--S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---TTE
T ss_pred hCCCceEEEEECCCC--ceeEEEecC--ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc-ceeeecCCCCc
Confidence 445788999999886 567788764 3666677777 66667776543 33 3589999999886 77776655443
Q ss_pred eE---EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE
Q 010654 80 DT---AASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 117 (505)
Q Consensus 80 ~~---~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 117 (505)
.. +|+|||+.|+|.+...+....-|+.+++++ ++.++
T Consensus 239 ~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t-~~~~~ 278 (386)
T PF14583_consen 239 SVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDT-GERRR 278 (386)
T ss_dssp EEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT---EEE
T ss_pred ccccccccCCCCEEEEEeecCCCCceEEEeeCCCC-CCceE
Confidence 32 299999999998765444456788889886 44443
No 169
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.13 E-value=5.8e-05 Score=69.38 Aligned_cols=212 Identities=17% Similarity=0.126 Sum_probs=112.1
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHH-HCCc--E--EEEEcccCCCCCchhHHHcc-------cccCCc-----chHHHH
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLL-DRGF--I--FAIAQIRGGGELGRQWYENG-------KFLKKK-----NTFTDF 326 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~-~~G~--~--v~~~d~rG~~~~g~~~~~~~-------~~~~~~-----~~~~D~ 326 (505)
-..|++||..++.. .|....+.+. +.|. - ++.++.-|.-.+...+.... ...+.. ....=+
T Consensus 12 tPTifihG~~gt~~--s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 12 TPTIFIHGYGGTAN--SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp EEEEEE--TTGGCC--CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CcEEEECCCCCChh--HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 44677898766533 4677778886 5655 2 44444444333322222110 001111 244556
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCCCcccccccCCC
Q 010654 327 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 401 (505)
Q Consensus 327 ~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 401 (505)
..++.+|.++.-+ +++-++||||||..+..++..+.. .+...|..++-+|-...... .. .......-| |
T Consensus 90 ~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-~~--~~~~~~~~g-p 163 (255)
T PF06028_consen 90 KKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-DQ--NQNDLNKNG-P 163 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC--T--TTT-CSTT--B
T ss_pred HHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-cc--hhhhhcccC-C
Confidence 6788888887555 689999999999999888877422 34555555554443221110 00 000112224 5
Q ss_pred -CCHHHHHHHHhCChhhcccCCCCCeEEEEccC------CCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCC
Q 010654 402 -WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 474 (505)
Q Consensus 402 -~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~------~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 474 (505)
...+.|..+.+.- -.+.++ .. .||-|.|. .|-.||...++.+..-++......+-..+... .+.|...-
T Consensus 164 ~~~~~~y~~l~~~~-~~~~p~-~i-~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~-~a~HS~Lh 239 (255)
T PF06028_consen 164 KSMTPMYQDLLKNR-RKNFPK-NI-QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK-DAQHSQLH 239 (255)
T ss_dssp SS--HHHHHHHHTH-GGGSTT-T--EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG-GGSCCGGG
T ss_pred cccCHHHHHHHHHH-HhhCCC-Ce-EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC-CCccccCC
Confidence 2333444444220 012221 33 49999998 89999999998888888877777777788743 45786432
Q ss_pred ChHHHHHHHHHHHHHH
Q 010654 475 GRFERLREAAFTYTFL 490 (505)
Q Consensus 475 ~~~~~~~~~~~~~~fl 490 (505)
...... ..+..||
T Consensus 240 eN~~V~---~~I~~FL 252 (255)
T PF06028_consen 240 ENPQVD---KLIIQFL 252 (255)
T ss_dssp CCHHHH---HHHHHHH
T ss_pred CCHHHH---HHHHHHh
Confidence 222222 2466666
No 170
>PRK04940 hypothetical protein; Provisional
Probab=98.12 E-value=5.5e-05 Score=64.82 Aligned_cols=118 Identities=16% Similarity=0.040 Sum_probs=67.8
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 421 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 421 (505)
++++|+|.|+|||.+.+++.++. ..+|..+|.+.....+.. .+.... .|. .-.++..+.++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P~~~L~~-~ig~~~-~y~----~~~~~h~~eL~---------- 120 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLFPEENMEG-KIDRPE-EYA----DIATKCVTNFR---------- 120 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCChHHHHHH-HhCCCc-chh----hhhHHHHHHhh----------
Confidence 46999999999999999999864 246667776665433211 110000 011 11222222333
Q ss_pred CCCC-eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 010654 422 QNYP-HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 491 (505)
Q Consensus 422 ~~~P-p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 491 (505)
++.| ..+++..+.|++.++.++.+.+... .+..+.+ |+.|.+. +..+ ....+.+|+.
T Consensus 121 ~~~p~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~---GGdH~f~-~fe~---~l~~I~~F~~ 178 (180)
T PRK04940 121 EKNRDRCLVILSRNDEVLDSQRTAEELHPY------YEIVWDE---EQTHKFK-NISP---HLQRIKAFKT 178 (180)
T ss_pred hcCcccEEEEEeCCCcccCHHHHHHHhccC------ceEEEEC---CCCCCCC-CHHH---HHHHHHHHHh
Confidence 1112 3788889999999887776655322 1234554 7788764 2222 3345788874
No 171
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.11 E-value=8.8e-05 Score=72.56 Aligned_cols=71 Identities=20% Similarity=0.162 Sum_probs=46.5
Q ss_pred ccCCC-CCeEEEEccCCCCCCCCChHHHHHHHHHhcCC-CCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHh
Q 010654 419 VKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKT-DDNILLFKCELGAGHFS-KSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 419 ~~~~~-~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~~fl~~~ 493 (505)
..+|+ +| +|.+-|+.|.+||+.++..+.+.....+- ..+.++.+ ++||.+ ..+...+.+-+..+.+||.++
T Consensus 333 l~~I~~~p-ll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~---~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVA-LLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQP---GVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccc-eEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecC---CCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 45777 87 99999999999999999888776532221 11223343 789943 333333334455678888753
No 172
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=98.06 E-value=8e-06 Score=85.35 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=82.6
Q ss_pred eeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC-CCC--chhHHHHHHCCcEEEEEcccCCCCCchhHHHccccc-CCcc
Q 010654 246 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL-KKKN 321 (505)
Q Consensus 246 i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~-~~~--~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~-~~~~ 321 (505)
+...++.|... ...+ .|++|++|||.-.... ..+ ......+..+..+|+.++||-+ -+| |...+... .+..
T Consensus 97 LylNV~tp~~~-~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG-~lG--F~st~d~~~~gN~ 171 (545)
T KOG1516|consen 97 LYLNVYTPQGC-SESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLG-PLG--FLSTGDSAAPGNL 171 (545)
T ss_pred ceEEEeccCCC-ccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccce-ece--eeecCCCCCCCcc
Confidence 44566777665 2223 9999999998532211 111 1222355566899999999954 222 22122112 3556
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCc
Q 010654 322 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPF 376 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~ 376 (505)
.+.|+..|++|+.++ -.-||++|.|+|+|+||..+..++.. | .+|+.+|..+|.
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S-p~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS-PHSRGLFHKAISMSGN 231 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC-HhhHHHHHHHHhhccc
Confidence 678999999999875 23699999999999999988777653 3 478888877774
No 173
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.01 E-value=7.8e-05 Score=65.00 Aligned_cols=122 Identities=17% Similarity=0.173 Sum_probs=80.6
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC---------CCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR---------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~---------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
+....+|+.++|-.| ||.|+|.|+.+++.+++.. | .|+-+|..+|+.-.-
T Consensus 92 l~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~---------------- 150 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPS---------------- 150 (230)
T ss_pred HHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCc----------------
Confidence 555667888888777 6899999999999988721 2 356666666643210
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCCh
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 476 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 476 (505)
.+.+ -..+...+++| .|.+.|+.|..||...+..|++....+ +++.. .+||..+...
T Consensus 151 ---~~~~-----------~~~~~~~i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a------~vl~H--pggH~VP~~~ 207 (230)
T KOG2551|consen 151 ---KKLD-----------ESAYKRPLSTP-SLHIFGETDTIVPSERSEQLAESFKDA------TVLEH--PGGHIVPNKA 207 (230)
T ss_pred ---chhh-----------hhhhccCCCCC-eeEEecccceeecchHHHHHHHhcCCC------eEEec--CCCccCCCch
Confidence 0001 11123456787 999999999999999999999988765 23332 5699876543
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 010654 477 FERLREAAFTYTFLMRALS 495 (505)
Q Consensus 477 ~~~~~~~~~~~~fl~~~l~ 495 (505)
...+ .+.+|+...+.
T Consensus 208 -~~~~---~i~~fi~~~~~ 222 (230)
T KOG2551|consen 208 -KYKE---KIADFIQSFLQ 222 (230)
T ss_pred -HHHH---HHHHHHHHHHH
Confidence 2222 36777766553
No 174
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.00 E-value=9.8e-05 Score=68.83 Aligned_cols=120 Identities=18% Similarity=0.184 Sum_probs=81.2
Q ss_pred eEEEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCC----CCCchhHHHHHH-CCcEEEEEcccCCCCC
Q 010654 232 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND----PAFNSSRLSLLD-RGFIFAIAQIRGGGEL 306 (505)
Q Consensus 232 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~----~~~~~~~~~l~~-~G~~v~~~d~rG~~~~ 306 (505)
..+++.+.. |+..|.+..+.-++. ++...||+.-|-...-.. ...+.....+++ .|-.|+..||||-|.+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S 185 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS 185 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC
Confidence 456677766 999998876653433 445677777654322111 011223445554 5999999999998754
Q ss_pred chhHHHcccccCCcchHHHHHHHHHHHHHcC-CCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 307 GRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 307 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
-. .. .....+.|..++++||.++. .+.+++|.+.|+|.||.+++.++..+
T Consensus 186 ~G------~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 186 TG------PP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CC------CC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 21 11 23467899999999999753 46789999999999999988776653
No 175
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.99 E-value=0.0041 Score=62.62 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=88.9
Q ss_pred eEEEEECCCCCCCC-eEEEEecC----C-ceEE-EEEEeCCCcEEEEEecc--ccceEEEEEeCCCCCceeeeeccccce
Q 010654 9 KAWLHKLEADQSND-ICLYHEKD----D-IYSL-GLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 9 ~l~~~~lgt~~~~~-~~~~~~~~----~-~~~~-~~~~SpDg~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
.+|+........+. +.|+.... . .+.+ ...+||||++|+|.... .+...|+++|+++|+.+........+.
T Consensus 94 ~~~r~~~~~~~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~ 173 (414)
T PF02897_consen 94 VLYRRKTDEEDGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFS 173 (414)
T ss_dssp EEEEEETTS-TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESE
T ss_pred EEEEEecccCCCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccc
Confidence 35666655212333 56665321 2 2233 57899999999999654 456899999999986111111222222
Q ss_pred eEEeeeeCCEEEEEEcCCCCC------CceEEEeeCCCCCCceE-EEcCCCCce-eeEEEEeCC--EEEEEEecCCe-eE
Q 010654 80 DTAASHRGNHFFITRRSDELF------NSELLACPVDNTSETTV-LIPHRESVK-LQDIQLFID--HLAVYEREGGL-QK 148 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~------~~~l~~~~~~~~~~~~~-~~~~~~~~~-i~~~~~~~d--~l~~~~~~~~~-~~ 148 (505)
...|++||+.|+|.+...... ..++++..+.+...... ++....... .-.+..+.| .+++....... +.
T Consensus 174 ~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~ 253 (414)
T PF02897_consen 174 SVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESE 253 (414)
T ss_dssp EEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEE
T ss_pred eEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCe
Confidence 256999999999998764322 57899999976333323 444433332 446666765 56666666555 78
Q ss_pred EEEEEcCC
Q 010654 149 ITTYRLPA 156 (505)
Q Consensus 149 l~~~~~~~ 156 (505)
++++++..
T Consensus 254 v~~~d~~~ 261 (414)
T PF02897_consen 254 VYLLDLDD 261 (414)
T ss_dssp EEEEECCC
T ss_pred EEEEeccc
Confidence 88888764
No 176
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.96 E-value=0.00078 Score=66.26 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=62.5
Q ss_pred CCCcEEEEE----cCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHH---
Q 010654 261 GSDPLLLYG----YGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL--- 333 (505)
Q Consensus 261 ~~~P~iv~~----hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l--- 333 (505)
.+.|.||.- ||- +..... -+.....-...|.-|..+-+.-. ....+.++|+..+....
T Consensus 67 ~krP~vViDPRAGHGp-GIGGFK-~dSevG~AL~~GHPvYFV~F~p~-------------P~pgQTl~DV~~ae~~Fv~~ 131 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGP-GIGGFK-PDSEVGVALRAGHPVYFVGFFPE-------------PEPGQTLEDVMRAEAAFVEE 131 (581)
T ss_pred CCCCeEEeCCCCCCCC-CccCCC-cccHHHHHHHcCCCeEEEEecCC-------------CCCCCcHHHHHHHHHHHHHH
Confidence 456777763 542 221111 13344445566888777765422 22235667777654433
Q ss_pred -HHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEE-EecCCchhh
Q 010654 334 -IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA-VAAVPFVDV 379 (505)
Q Consensus 334 -~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~-v~~~~~~d~ 379 (505)
.++.- +..|..++|.+.||++++.+++.+|+++.-+ ++.+|+.-|
T Consensus 132 V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 132 VAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYW 178 (581)
T ss_pred HHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcccc
Confidence 33321 2238999999999999999999999988654 456676543
No 177
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.92 E-value=0.00063 Score=60.40 Aligned_cols=144 Identities=16% Similarity=0.135 Sum_probs=86.4
Q ss_pred EEEEEeCCCcEEEEEeccc---------cceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCce
Q 010654 35 LGLQASESKKFLFIASESK---------ITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSE 103 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~---------~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~ 103 (505)
+...|+|+|.+|++..... ...+||.++..+.. ...+.-...+ ....|||+|+.|++.... .+ ..
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~-~~~i~l~~~~~I~~~~WsP~g~~favi~g~--~~-~~ 84 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIP-VESIELKKEGPIHDVAWSPNGNEFAVIYGS--MP-AK 84 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCc-cceeeccCCCceEEEEECcCCCEEEEEEcc--CC-cc
Confidence 4678999999999987631 25689999887765 5554433333 335699999999988643 22 26
Q ss_pred EEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 104 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
+.++++.. .....+.. ..+..+.|++++ +++....+-...+.+|++.. ...+. +. +.. ....
T Consensus 85 v~lyd~~~--~~i~~~~~---~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~-~~~i~--------~~-~~~-~~t~ 148 (194)
T PF08662_consen 85 VTLYDVKG--KKIFSFGT---QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK-KKKIS--------TF-EHS-DATD 148 (194)
T ss_pred cEEEcCcc--cEeEeecC---CCceEEEECCCCCEEEEEEccCCCcEEEEEECCC-CEEee--------cc-ccC-cEEE
Confidence 77777753 22112322 234578899874 33333334446788999862 22111 11 111 1223
Q ss_pred CCCcccCCEEEEEEecC
Q 010654 182 SESVFSSRILRFHYSSL 198 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~ 198 (505)
..++|+|+.++...+.+
T Consensus 149 ~~WsPdGr~~~ta~t~~ 165 (194)
T PF08662_consen 149 VEWSPDGRYLATATTSP 165 (194)
T ss_pred EEEcCCCCEEEEEEecc
Confidence 56899999877655543
No 178
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.91 E-value=0.0053 Score=58.37 Aligned_cols=181 Identities=12% Similarity=0.063 Sum_probs=97.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
...|++|++.++ +....+..... .....|+|||+.+++... ....++++|+.+++....+..........|+|+
T Consensus 10 d~~v~~~d~~t~--~~~~~~~~~~~--~~~l~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 83 (300)
T TIGR03866 10 DNTISVIDTATL--EVTRTFPVGQR--PRGITLSKDGKLLYVCAS--DSDTIQVIDLATGEVIGTLPSGPDPELFALHPN 83 (300)
T ss_pred CCEEEEEECCCC--ceEEEEECCCC--CCceEECCCCCEEEEEEC--CCCeEEEEECCCCcEEEeccCCCCccEEEECCC
Confidence 457999999775 23344442221 235789999998765543 245688999988762222332222223459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQG 166 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 166 (505)
|+.+++....+ ..|.++|+.+ ......+.. ...+..+.+++++-+++........+..++... +....
T Consensus 84 g~~l~~~~~~~----~~l~~~d~~~-~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~-~~~~~---- 151 (300)
T TIGR03866 84 GKILYIANEDD----NLVTVIDIET-RKVLAEIPV--GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKT-YEIVD---- 151 (300)
T ss_pred CCEEEEEcCCC----CeEEEEECCC-CeEEeEeeC--CCCcceEEECCCCCEEEEEecCCCeEEEEeCCC-CeEEE----
Confidence 99877665332 3788899875 221112221 122456778876533333332223455566542 21111
Q ss_pred CceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 167 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+.... ......+++++..+++... ....++++++.+++
T Consensus 152 --~~~~~~---~~~~~~~s~dg~~l~~~~~---~~~~v~i~d~~~~~ 190 (300)
T TIGR03866 152 --NVLVDQ---RPRFAEFTADGKELWVSSE---IGGTVSVIDVATRK 190 (300)
T ss_pred --EEEcCC---CccEEEECCCCCEEEEEcC---CCCEEEEEEcCcce
Confidence 011001 0112345677876665432 23568888887765
No 179
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.90 E-value=0.00019 Score=61.80 Aligned_cols=155 Identities=13% Similarity=0.163 Sum_probs=92.3
Q ss_pred hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 284 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 284 ~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
....|+++|+.|+-+|-+ +-|.. .........|+...+++..++.. .+++.++|+|+|+-+.-.+..+-
T Consensus 21 ~a~~l~~~G~~VvGvdsl------~Yfw~---~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSL------RYFWS---ERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHHHCCCeEEEechH------HHHhh---hCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhC
Confidence 346899999999999964 11221 22333567888899988887744 37999999999999888888877
Q ss_pred CC----ceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCC
Q 010654 364 PD----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVM 439 (505)
Q Consensus 364 p~----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp 439 (505)
|. .++.+++.+|-... .+ ......| +|.+... ..+.+...+.++...+++.|.|+++.-.+
T Consensus 90 p~~~r~~v~~v~Ll~p~~~~-dF------eihv~~w--lg~~~~~------~~~~~~pei~~l~~~~v~CiyG~~E~d~~ 154 (192)
T PF06057_consen 90 PAALRARVAQVVLLSPSTTA-DF------EIHVSGW--LGMGGDD------AAYPVIPEIAKLPPAPVQCIYGEDEDDSL 154 (192)
T ss_pred CHHHHhheeEEEEeccCCcc-eE------EEEhhhh--cCCCCCc------ccCCchHHHHhCCCCeEEEEEcCCCCCCc
Confidence 76 45555555553211 00 0000111 1222111 11234444555544469999998775422
Q ss_pred CChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChH
Q 010654 440 YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 477 (505)
Q Consensus 440 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~ 477 (505)
...|+.. .++.+..| +||++..+..
T Consensus 155 -------cp~l~~~--~~~~i~lp----GgHHfd~dy~ 179 (192)
T PF06057_consen 155 -------CPSLRQP--GVEVIALP----GGHHFDGDYD 179 (192)
T ss_pred -------CccccCC--CcEEEEcC----CCcCCCCCHH
Confidence 1234443 45567776 5888765543
No 180
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.90 E-value=1.8e-05 Score=58.52 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=43.6
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 307 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g 307 (505)
|.+|....+.|+. .+..+|+++||...... .|....+.|+++||.|+..|.||+|.+.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~--ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSG--RYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHH--HHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 5667666555543 15789999999754322 3666778999999999999999999875
No 181
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.88 E-value=0.00045 Score=66.54 Aligned_cols=142 Identities=17% Similarity=0.201 Sum_probs=89.3
Q ss_pred chHHHHHHHHHHHHHcCC--CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhh-hhhccCCCCCC-------
Q 010654 321 NTFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV-LTTMLDPTIPL------- 390 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~--~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~-~~~~~~~~~~~------- 390 (505)
-+.-|++.|+.++.++-. .+.-++.++|+|+|||++..++--.|..|.+++--++..-. +.+..+.....
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~ 240 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSG 240 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccc
Confidence 356788889999888722 22348889999999999999999899999999876654322 11111111100
Q ss_pred -------------Ccccccc-cCCCC--CHHHHHHHHhC-Ch--hhcccCC-CCCeEEEEccCCCCCCCCChHHHHHHHH
Q 010654 391 -------------TTAEWEE-WGDPW--KEEFYFYMKSY-SP--VDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKL 450 (505)
Q Consensus 391 -------------~~~~~~~-~g~~~--~~~~~~~~~~~-sp--~~~~~~~-~~Pp~Li~~G~~D~~vp~~~~~~~~~~L 450 (505)
....|.. .+.|. .++.+ .++.. ++ +.-..+. +-|-....|+..|+.+|+++-.++++.|
T Consensus 241 ~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~-~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l 319 (403)
T PF11144_consen 241 EFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARY-IIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEIL 319 (403)
T ss_pred cccccCCEEEEEEeccccccCCCCccccChHHH-HHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHH
Confidence 0001111 12221 12111 22222 11 1111111 3345788999999999999999999999
Q ss_pred HhcCCCCCeEEEE
Q 010654 451 REMKTDDNILLFK 463 (505)
Q Consensus 451 ~~~~~~~~~~~~~ 463 (505)
+..|-++++.+..
T Consensus 320 ~~lgfda~l~lIk 332 (403)
T PF11144_consen 320 KNLGFDATLHLIK 332 (403)
T ss_pred HHcCCCeEEEEec
Confidence 9999999999884
No 182
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.86 E-value=0.00061 Score=70.73 Aligned_cols=163 Identities=15% Similarity=0.072 Sum_probs=91.2
Q ss_pred EEEEEEeCCCcEEEEEecc-----ccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC-------CCCC
Q 010654 34 SLGLQASESKKFLFIASES-----KITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD-------ELFN 101 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~-----~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~~ 101 (505)
..+++.||||++++|.... ...+.||+++..+ . .+.++....-....|||||++|++..+.. ....
T Consensus 352 vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~-~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 352 ITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-V-AVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred cccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-c-ceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 3478899999999999742 2467999999744 3 56666554322345999999999987531 1123
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEc--CCCCCcccccCCCceeeccCCee
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRL--PAVGEPLKSLQGGKSVEFIDPVY 177 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~--~~~~~~~~~l~~~~~~~~~~~~~ 177 (505)
.+++++++++ ++.. . ..+..+.++.|++|+ ++++. ++ ++++--+ ..+|. ..|+....+. +....
T Consensus 430 gql~~~~vd~-ge~~-~---~~~g~Issl~wSpDG~RiA~i~--~g--~v~Va~Vvr~~~G~--~~l~~~~~l~-~~l~~ 497 (591)
T PRK13616 430 GQLARTPVDA-SAVA-S---RVPGPISELQLSRDGVRAAMII--GG--KVYLAVVEQTEDGQ--YALTNPREVG-PGLGD 497 (591)
T ss_pred ceEEEEeccC-chhh-h---ccCCCcCeEEECCCCCEEEEEE--CC--EEEEEEEEeCCCCc--eeecccEEee-cccCC
Confidence 5788777765 4332 1 223358899999884 55444 44 4555222 22232 3332212221 11000
Q ss_pred eecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 178 SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
....+.|..++. +++..++...| ++++++.+..
T Consensus 498 ~~~~l~W~~~~~-L~V~~~~~~~~--v~~v~vDG~~ 530 (591)
T PRK13616 498 TAVSLDWRTGDS-LVVGRSDPEHP--VWYVNLDGSN 530 (591)
T ss_pred ccccceEecCCE-EEEEecCCCCc--eEEEecCCcc
Confidence 112234544444 65555544443 5777776443
No 183
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.83 E-value=0.00052 Score=57.73 Aligned_cols=120 Identities=17% Similarity=0.219 Sum_probs=78.9
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccccc
Q 010654 317 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 396 (505)
Q Consensus 317 ~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 396 (505)
.+-....+|..+.++..+..- ++.+.+++||.|+.+++..+.+....++++...+|.- +.+.. . +
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~~~---~-------~- 101 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSRPE---I-------R- 101 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-ccccc---c-------c-
Confidence 455566788887776655432 4558999999999999999887666788888888742 11100 0 0
Q ss_pred ccCCCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 397 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 397 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
+. .+..++|+... +...| .+++++.+|+.|++++++.+++++-.+ ++... .+||.
T Consensus 102 -------~~---~~~tf~~~p~~-~lpfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~-----lv~~g---~~GHi 156 (181)
T COG3545 102 -------PK---HLMTFDPIPRE-PLPFP-SVVVASRNDPYVSYEHAEDLANAWGSA-----LVDVG---EGGHI 156 (181)
T ss_pred -------hh---hccccCCCccc-cCCCc-eeEEEecCCCCCCHHHHHHHHHhccHh-----heecc---ccccc
Confidence 00 11223333222 22344 999999999999999999999988664 23333 56774
No 184
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.82 E-value=0.00019 Score=68.73 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=60.7
Q ss_pred hhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 283 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 283 ~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.....++++|.-|++++.++-...-. ...+.....+++..|++.+++... .++|-+.|+|.||.+++.+++.
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHh
Confidence 35678999999999999875432111 112222344677788888887643 2689999999999999988887
Q ss_pred CCCc-eeEEEecCCchh
Q 010654 363 RPDL-FKAAVAAVPFVD 378 (505)
Q Consensus 363 ~p~~-~~a~v~~~~~~d 378 (505)
++.+ ++.+.......|
T Consensus 202 ~~~k~I~S~T~lts~~D 218 (445)
T COG3243 202 MAAKRIKSLTLLTSPVD 218 (445)
T ss_pred hhhcccccceeeecchh
Confidence 7766 666555444333
No 185
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.78 E-value=9.8e-05 Score=74.71 Aligned_cols=114 Identities=21% Similarity=0.235 Sum_probs=69.0
Q ss_pred CcEEEEEcCCCCcCCCC-CCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcc----cccCCcchHHHHHHHHHHHHHc
Q 010654 263 DPLLLYGYGSYEICNDP-AFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENG----KFLKKKNTFTDFIACAEYLIKN 336 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~-~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~----~~~~~~~~~~D~~~~~~~l~~~ 336 (505)
.|++|++ ||-+..... ........||++ |-.|+...+|--|.+-. +.... ....-.+.++|+...++++..+
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 7888888 443322110 011123456664 99999999996654321 11111 1122237899999999999865
Q ss_pred C-CCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchh
Q 010654 337 C-YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 378 (505)
Q Consensus 337 ~-~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d 378 (505)
- ..+..++.++|+||||.+++|+-.++|++|.++++.++.+.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 34446899999999999999999999999999998877543
No 186
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.71 E-value=2.5e-05 Score=64.63 Aligned_cols=112 Identities=16% Similarity=0.228 Sum_probs=76.8
Q ss_pred HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHH
Q 010654 329 CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYF 408 (505)
Q Consensus 329 ~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 408 (505)
--+|++++.. |.+..+.|.|+||+.++....++|++|..+|+.+|++|...++.+ ... .. .-|
T Consensus 90 yerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~-yyd-dD---v~y---------- 152 (227)
T COG4947 90 YERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGG-YYD-DD---VYY---------- 152 (227)
T ss_pred HHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccc-ccc-Cc---eee----------
Confidence 3356666643 466778999999999999999999999999999999997654421 100 00 001
Q ss_pred HHHhCChhhcccCCCCC---------eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEE
Q 010654 409 YMKSYSPVDNVKAQNYP---------HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 463 (505)
Q Consensus 409 ~~~~~sp~~~~~~~~~P---------p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~ 463 (505)
.||.+++..+..| .+.+..|.+|+.. .+..++.+.|.+..+|..+.++.
T Consensus 153 ----nsP~dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L--~~~~~L~~~l~dKqipaw~~~Wg 210 (227)
T COG4947 153 ----NSPSDYLPGLADPFRLERLRRIDMVFCIGDEDPFL--DNNQHLSRLLSDKQIPAWMHVWG 210 (227)
T ss_pred ----cChhhhccCCcChHHHHHHhhccEEEEecCccccc--cchHHHHHHhccccccHHHHHhc
Confidence 2332222222111 4778889999887 46778889999998888776664
No 187
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.70 E-value=0.00069 Score=70.34 Aligned_cols=134 Identities=7% Similarity=-0.009 Sum_probs=82.8
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc---------ccceEEEEEeCCCCCceeeeeccc
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELRVLTPRV 76 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~---------~~~~~l~~~d~~~~~~~~~l~~~~ 76 (505)
+..+||+.+.+.. .+.++.+. ....|.|||||++|.+.... ....++|+++++++. .++ .-.
T Consensus 377 ~~s~Lwv~~~gg~---~~~lt~g~---~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge-~~~--~~~ 447 (591)
T PRK13616 377 PASSLWVGPLGGV---AVQVLEGH---SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASA-VAS--RVP 447 (591)
T ss_pred cceEEEEEeCCCc---ceeeecCC---CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCch-hhh--ccC
Confidence 5678999997542 24454432 24579999999988877533 134689999998876 554 111
Q ss_pred cc-eeEEeeeeCCEEEEEEcCCCCCCceEEE---eeCCCCCCceE----EEcCCCCceeeEEEEeCCEEEEEEecCCeeE
Q 010654 77 VG-VDTAASHRGNHFFITRRSDELFNSELLA---CPVDNTSETTV----LIPHRESVKLQDIQLFIDHLAVYEREGGLQK 148 (505)
Q Consensus 77 ~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~ 148 (505)
.+ ..+.|||||++++|+.. .+|++ ...++ |..+. .++........++.|.++.-+++...++...
T Consensus 448 g~Issl~wSpDG~RiA~i~~------g~v~Va~Vvr~~~-G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~ 520 (591)
T PRK13616 448 GPISELQLSRDGVRAAMIIG------GKVYLAVVEQTED-GQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHP 520 (591)
T ss_pred CCcCeEEECCCCCEEEEEEC------CEEEEEEEEeCCC-CceeecccEEeecccCCccccceEecCCEEEEEecCCCCc
Confidence 12 23569999999999983 27777 34333 43221 2444444334678898874333445455455
Q ss_pred EEEEEcC
Q 010654 149 ITTYRLP 155 (505)
Q Consensus 149 l~~~~~~ 155 (505)
++.++++
T Consensus 521 v~~v~vD 527 (591)
T PRK13616 521 VWYVNLD 527 (591)
T ss_pred eEEEecC
Confidence 6666665
No 188
>COG3150 Predicted esterase [General function prediction only]
Probab=97.66 E-value=0.0019 Score=53.72 Aligned_cols=141 Identities=17% Similarity=0.141 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEe---cCCchhhhhhccCCCCCCCcccccccC
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA---AVPFVDVLTTMLDPTIPLTTAEWEEWG 399 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~---~~~~~d~~~~~~~~~~~~~~~~~~~~g 399 (505)
...+++-++-++.+. .|+ ..+|+|.|.|||.+.|++.++. +++++. ..|.-++..++..+..+.+...|.-
T Consensus 42 p~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l~gylg~~en~ytg~~y~l-- 115 (191)
T COG3150 42 PQQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYVL-- 115 (191)
T ss_pred HHHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEEe--
Confidence 344444455554442 232 3889999999999999998753 344332 2333344444333333333333310
Q ss_pred CCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCC-CCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHH
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 478 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~-D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 478 (505)
.+.+ ...+. ...+..++.|..|++.... |.+....++.+.+.... ..+.. |+.|.+.. ...
T Consensus 116 e~~h---I~~l~----~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~~-------~~V~d---gg~H~F~~-f~~ 177 (191)
T COG3150 116 ESRH---IATLC----VLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPCY-------EIVWD---GGDHKFKG-FSR 177 (191)
T ss_pred ehhh---HHHHH----HhhccccCCCcEEEeecccccHHHHHHHHHHHhhhhh-------heeec---CCCccccc-hHH
Confidence 0111 11111 1234444556566665555 88887776666665543 24566 67887642 222
Q ss_pred HHHHHHHHHHHH
Q 010654 479 RLREAAFTYTFL 490 (505)
Q Consensus 479 ~~~~~~~~~~fl 490 (505)
. +..+.+|.
T Consensus 178 ~---l~~i~aF~ 186 (191)
T COG3150 178 H---LQRIKAFK 186 (191)
T ss_pred h---HHHHHHHh
Confidence 2 23467775
No 189
>PRK10115 protease 2; Provisional
Probab=97.60 E-value=0.021 Score=61.00 Aligned_cols=132 Identities=7% Similarity=0.078 Sum_probs=79.2
Q ss_pred CeEEEEec-----CCceEE-EEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-ceeeeeccccceeEEeeeeCCEEEE
Q 010654 22 DICLYHEK-----DDIYSL-GLQASESKKFLFIASESK--ITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFI 92 (505)
Q Consensus 22 ~~~~~~~~-----~~~~~~-~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~ 92 (505)
.+.|++.+ +..+.+ ...|||||++|++..... ...+|+++|+.+|. ....+.... ....|++||+.|+|
T Consensus 111 ~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y 188 (686)
T PRK10115 111 WETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYY 188 (686)
T ss_pred CEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEE
Confidence 45666521 233444 578999999999996543 57889999999875 122332211 22459999999999
Q ss_pred EEcCCC-CCCceEEEeeCCCCCCceE-EEcCCCC-ceeeEEEE-eCCEEEEEEecCCeeEEEEEEcC
Q 010654 93 TRRSDE-LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQL-FIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 93 ~~~~~~-~~~~~l~~~~~~~~~~~~~-~~~~~~~-~~i~~~~~-~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.++... ....++|+.++.+...... ++..... ..+....- ++..+++....+..+.+++++.+
T Consensus 189 ~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~ 255 (686)
T PRK10115 189 VRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred EEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence 988532 2337999999987322222 4442222 11222221 23356655555555677888754
No 190
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.52 E-value=0.0064 Score=59.48 Aligned_cols=166 Identities=18% Similarity=0.187 Sum_probs=86.8
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceee---e-ecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV---L-TPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~---l-~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
.+.++|||+++++.....+ .|++++++... ++.. + .+...|.. ..|+|||+.+|+..... ..|.++++
T Consensus 148 ~v~~~pdg~~v~v~dlG~D--~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s----~~v~v~~~ 221 (345)
T PF10282_consen 148 QVVFSPDGRFVYVPDLGAD--RVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELS----NTVSVFDY 221 (345)
T ss_dssp EEEE-TTSSEEEEEETTTT--EEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTT----TEEEEEEE
T ss_pred eEEECCCCCEEEEEecCCC--EEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCC----CcEEEEee
Confidence 5678999999877654444 45555554432 1322 1 12223333 34999999999887653 35666665
Q ss_pred C-CCCCceE-----EEcCCC--CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 110 D-NTSETTV-----LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 110 ~-~~~~~~~-----~~~~~~--~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
. ..+..+. .++... .....++..++|+.++++...+...+.+|+++..++.++.+. .+.. ... ....
T Consensus 222 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~---~~~~-~G~-~Pr~ 296 (345)
T PF10282_consen 222 DPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQ---TVPT-GGK-FPRH 296 (345)
T ss_dssp ETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEE---EEEE-SSS-SEEE
T ss_pred cccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEE---EEeC-CCC-CccE
Confidence 5 1132211 121211 124667888887544444444556788999864444343221 1111 000 0122
Q ss_pred CCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 182 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.++++++.+++ .+....--.+|.+|.++|.
T Consensus 297 ~~~s~~g~~l~V-a~~~s~~v~vf~~d~~tG~ 327 (345)
T PF10282_consen 297 FAFSPDGRYLYV-ANQDSNTVSVFDIDPDTGK 327 (345)
T ss_dssp EEE-TTSSEEEE-EETTTTEEEEEEEETTTTE
T ss_pred EEEeCCCCEEEE-EecCCCeEEEEEEeCCCCc
Confidence 455778886554 4444455677888888887
No 191
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.51 E-value=0.00085 Score=67.90 Aligned_cols=131 Identities=13% Similarity=0.009 Sum_probs=76.8
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC----------------chhHHHHHHCCcEEEEEc-ccCCCC
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF----------------NSSRLSLLDRGFIFAIAQ-IRGGGE 305 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~----------------~~~~~~l~~~G~~v~~~d-~rG~~~ 305 (505)
+..+..|++..... ....|+|++++||||.+...+. ......|.+.+ .++.+| ++|.|.
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~-~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEA-YVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccccc-CeEEEeCCCCcCc
Confidence 45676665554432 3567999999999986532211 01112466665 455555 567664
Q ss_pred CchhHHHcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhC---C-------CceeEEEecC
Q 010654 306 LGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMR---P-------DLFKAAVAAV 374 (505)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~---p-------~~~~a~v~~~ 374 (505)
.-.... .....-....+|+..+++...++ +.....++.|+|+||||..+..++.+- . =-+++++...
T Consensus 136 S~~~~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYADKA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccCCCC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 322111 01111124567777777755443 434457899999999999776665431 1 1368888888
Q ss_pred Cchhh
Q 010654 375 PFVDV 379 (505)
Q Consensus 375 ~~~d~ 379 (505)
|.+|.
T Consensus 214 g~~dp 218 (462)
T PTZ00472 214 GLTDP 218 (462)
T ss_pred cccCh
Confidence 87664
No 192
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.50 E-value=0.017 Score=54.91 Aligned_cols=179 Identities=13% Similarity=0.060 Sum_probs=91.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-eeccccceeEEeeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGVDTAASHR 86 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~~~~~~~~~s~d 86 (505)
..|++||+.+. +....+.. ......+.|+|||+.+++.... .+.++.+|..++. ... +..........|+||
T Consensus 95 ~~l~~~d~~~~--~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~s~d 167 (300)
T TIGR03866 95 NLVTVIDIETR--KVLAEIPV--GVEPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYE-IVDNVLVDQRPRFAEFTAD 167 (300)
T ss_pred CeEEEEECCCC--eEEeEeeC--CCCcceEEECCCCCEEEEEecC--CCeEEEEeCCCCe-EEEEEEcCCCccEEEECCC
Confidence 46888888663 12222221 1112357899999998776442 3346667887765 322 211111222459999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC------CCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCCCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR------ESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
|+.|++.+..+ ..++++|+++ ++..-.+... .......+.++++. +++... +..++.+|++.. +
T Consensus 168 g~~l~~~~~~~----~~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~--~~~~i~v~d~~~-~ 239 (300)
T TIGR03866 168 GKELWVSSEIG----GTVSVIDVAT-RKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG--PANRVAVVDAKT-Y 239 (300)
T ss_pred CCEEEEEcCCC----CEEEEEEcCc-ceeeeeeeecccccccccCCccceEECCCCCEEEEEcC--CCCeEEEEECCC-C
Confidence 99888765432 3788889875 3211011110 01112345666653 333322 224578888753 2
Q ss_pred CcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 159 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..... +.... .+..+.++++++.++.... .-..+.+++..+++
T Consensus 240 ~~~~~------~~~~~---~~~~~~~~~~g~~l~~~~~---~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 240 EVLDY------LLVGQ---RVWQLAFTPDEKYLLTTNG---VSNDVSVIDVAALK 282 (300)
T ss_pred cEEEE------EEeCC---CcceEEECCCCCEEEEEcC---CCCeEEEEECCCCc
Confidence 21111 11011 1223456778886543321 23468888887766
No 193
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.49 E-value=0.0046 Score=54.85 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=61.3
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
..+++|||+|+.+++..... ...+-+.|++... ...+.... -....|||+|+.|++.+-. ...+.|..+|...
T Consensus 62 I~~~~WsP~g~~favi~g~~-~~~v~lyd~~~~~-i~~~~~~~-~n~i~wsP~G~~l~~~g~~--n~~G~l~~wd~~~-- 134 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGSM-PAKVTLYDVKGKK-IFSFGTQP-RNTISWSPDGRFLVLAGFG--NLNGDLEFWDVRK-- 134 (194)
T ss_pred eEEEEECcCCCEEEEEEccC-CcccEEEcCcccE-eEeecCCC-ceEEEECCCCCEEEEEEcc--CCCcEEEEEECCC--
Confidence 55889999999987775432 2266777776332 33332221 2234699999998887643 1235788899874
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEEE
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~~ 141 (505)
.. .+..........++|++|+.+++.
T Consensus 135 -~~-~i~~~~~~~~t~~~WsPdGr~~~t 160 (194)
T PF08662_consen 135 -KK-KISTFEHSDATDVEWSPDGRYLAT 160 (194)
T ss_pred -CE-EeeccccCcEEEEEEcCCCCEEEE
Confidence 22 222222234678999998655554
No 194
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.47 E-value=0.0052 Score=54.87 Aligned_cols=195 Identities=20% Similarity=0.162 Sum_probs=105.4
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCC-----cEEEEEcccCCCCCchhHHHc--------ccc---cCCcchHHH
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRG-----FIFAIAQIRGGGELGRQWYEN--------GKF---LKKKNTFTD 325 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~rG~~~~g~~~~~~--------~~~---~~~~~~~~D 325 (505)
..| .+++||..|...+ ++.....+..++ -.++.+|.-|+=..-...... +.. ......-.=
T Consensus 45 ~iP-TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIP-TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccc-eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 345 4567886654332 333444444443 467788877753221111110 000 111112234
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-----ceeEEEecCCchhhhhhccCCCCCCCcccccccCC
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGD 400 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 400 (505)
+..++.+|.++..+ .++-++||||||.....++..+.+ .....|+..+-++.-....++.. . +..--+.
T Consensus 122 lk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v--~--~v~~~~~ 195 (288)
T COG4814 122 LKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETV--T--DVLKDGP 195 (288)
T ss_pred HHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcch--h--eeeccCc
Confidence 55688889888655 578899999999988888766422 23445555444441111111111 1 1111111
Q ss_pred C-CCHHHHHHHHhCChhhcccCC--CCCeEEEEccCCC------CCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCC
Q 010654 401 P-WKEEFYFYMKSYSPVDNVKAQ--NYPHILVTAGLND------PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 401 ~-~~~~~~~~~~~~sp~~~~~~~--~~Pp~Li~~G~~D------~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 471 (505)
+ .....++++. .+.+.+ .+ -+|+|.|+.| -.||...+...+..+...+..+.--+|+.+ .+.|.
T Consensus 196 ~~~~t~y~~y~~-----~n~k~v~~~~-evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk-~a~Hs 268 (288)
T COG4814 196 GLIKTPYYDYIA-----KNYKKVSPNT-EVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGK-DARHS 268 (288)
T ss_pred cccCcHHHHHHH-----hcceeCCCCc-EEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCC-cchhh
Confidence 1 1111222222 111212 34 4999999765 579999999999999998888777788865 56785
Q ss_pred C
Q 010654 472 S 472 (505)
Q Consensus 472 ~ 472 (505)
-
T Consensus 269 ~ 269 (288)
T COG4814 269 K 269 (288)
T ss_pred c
Confidence 4
No 195
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.44 E-value=0.011 Score=57.10 Aligned_cols=128 Identities=19% Similarity=0.212 Sum_probs=84.1
Q ss_pred EEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC
Q 010654 57 FVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 135 (505)
Q Consensus 57 ~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d 135 (505)
.|-++|.++++ ++.+.+....+.. ..|+||+.++...+ +..|+++|+++ |..+ ++....+.-|.+++|.++
T Consensus 383 ~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNd-----r~el~vididn-gnv~-~idkS~~~lItdf~~~~n 454 (668)
T COG4946 383 KLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVAND-----RFELWVIDIDN-GNVR-LIDKSEYGLITDFDWHPN 454 (668)
T ss_pred eEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEcC-----ceEEEEEEecC-CCee-EecccccceeEEEEEcCC
Confidence 56667777775 6776665533332 38999998776543 35999999998 6666 777777778999999998
Q ss_pred EEEEEEe--cCC-eeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc
Q 010654 136 HLAVYER--EGG-LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 136 ~l~~~~~--~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
..++++. ..- ...+.+|++. +.++-. ++- +.+++.+ +++++|++.++|.......|.
T Consensus 455 sr~iAYafP~gy~tq~Iklydm~--~~Kiy~------vTT-~ta~Dfs-PaFD~d~ryLYfLs~RsLdPs 514 (668)
T COG4946 455 SRWIAYAFPEGYYTQSIKLYDMD--GGKIYD------VTT-PTAYDFS-PAFDPDGRYLYFLSARSLDPS 514 (668)
T ss_pred ceeEEEecCcceeeeeEEEEecC--CCeEEE------ecC-CcccccC-cccCCCCcEEEEEeccccCCC
Confidence 6555443 332 3357888876 332211 111 1223332 567889999988888766665
No 196
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.41 E-value=0.12 Score=50.11 Aligned_cols=138 Identities=11% Similarity=0.130 Sum_probs=69.9
Q ss_pred CceEEEEECCCCCCCCe--EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC-CCCceeeeeccc--cc-ee
Q 010654 7 PDKAWLHKLEADQSNDI--CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS-KPEELRVLTPRV--VG-VD 80 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~--~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~-~~~~~~~l~~~~--~~-~~ 80 (505)
...|..|++.+. .+.+ ..++... -.....+||||++|++.... ...+..++++ ++. +..+.... .. ..
T Consensus 11 ~~~I~~~~~~~~-g~l~~~~~~~~~~--~~~~l~~spd~~~lyv~~~~--~~~i~~~~~~~~g~-l~~~~~~~~~~~p~~ 84 (330)
T PRK11028 11 SQQIHVWNLNHE-GALTLLQVVDVPG--QVQPMVISPDKRHLYVGVRP--EFRVLSYRIADDGA-LTFAAESPLPGSPTH 84 (330)
T ss_pred CCCEEEEEECCC-CceeeeeEEecCC--CCccEEECCCCCEEEEEECC--CCcEEEEEECCCCc-eEEeeeecCCCCceE
Confidence 345888888543 2222 2222111 12245789999998776543 3445444443 454 43322111 11 22
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc-eE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSET-TV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..++|+|+.+|.....+ ..+.+++++..+.. .. .+... .....+.+++++-+++....+...+.+|+++.
T Consensus 85 i~~~~~g~~l~v~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~--~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 85 ISTDHQGRFLFSASYNA----NCVSVSPLDKDGIPVAPIQIIEGL--EGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred EEECCCCCEEEEEEcCC----CeEEEEEECCCCCCCCceeeccCC--CcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 34899999888776432 47777777531211 11 12111 12344556666433322333445688999875
No 197
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.40 E-value=0.00026 Score=68.06 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=60.1
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCch-hHHHHHH---CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHH
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFNS-SRLSLLD---RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 335 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~---~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 335 (505)
+.+.|++|++||.........|.. ....+.+ ..+.|+++|+...... .+..+... -...-..+...+..|.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n--~~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVAN--TRLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhh--HHHHHHHHHHHHHHHHh
Confidence 356899999999876652333332 2343444 4899999998532211 11111000 00112334455667775
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCC
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVP 375 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~ 375 (505)
...+++++|-|+|||.||.++..++..... .+..+.+.-|
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 555789999999999999999999877654 4444544444
No 198
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.33 E-value=0.11 Score=50.96 Aligned_cols=195 Identities=14% Similarity=0.185 Sum_probs=97.7
Q ss_pred CceEEEEECCCCCCCCeEEE---EecCCceEEEEEEeCCCcEEEEEeccc-cce--EEEEEeCCCCCceeeeeccc-cce
Q 010654 7 PDKAWLHKLEADQSNDICLY---HEKDDIYSLGLQASESKKFLFIASESK-ITR--FVFYLDVSKPEELRVLTPRV-VGV 79 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~---~~~~~~~~~~~~~SpDg~~i~~~~~~~-~~~--~l~~~d~~~~~~~~~l~~~~-~~~ 79 (505)
..-|+.+++-+...+-.++- ...+|.| ..++||+++|+...... ... ..|.++-+++. ++.+.... .+.
T Consensus 12 ~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~---l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~-L~~~~~~~~~g~ 87 (345)
T PF10282_consen 12 GGGIYVFRFDEETGTLTLVQTVAEGENPSW---LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGT-LTLLNSVPSGGS 87 (345)
T ss_dssp STEEEEEEEETTTTEEEEEEEEEESSSECC---EEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTE-EEEEEEEEESSS
T ss_pred CCcEEEEEEcCCCCCceEeeeecCCCCCce---EEEEeCCCEEEEEEccccCCCCEEEEEECCCcce-eEEeeeeccCCC
Confidence 34567777722223222222 2223333 46799999987776543 333 45566666565 65554332 222
Q ss_pred ---eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEc---------CCCCceeeEEEEeCCEEEEEEecC
Q 010654 80 ---DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIP---------HRESVKLQDIQLFIDHLAVYEREG 144 (505)
Q Consensus 80 ---~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~---------~~~~~~i~~~~~~~d~l~~~~~~~ 144 (505)
...++|||+.|+.....+ ..+.++++...+.... ++. .+.......+.+++|+-+++...-
T Consensus 88 ~p~~i~~~~~g~~l~vany~~----g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl 163 (345)
T PF10282_consen 88 SPCHIAVDPDGRFLYVANYGG----GSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL 163 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTT----TEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET
T ss_pred CcEEEEEecCCCEEEEEEccC----CeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec
Confidence 234889999888776542 3566666654232111 121 112233557778887544455555
Q ss_pred CeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 145 GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
|..++++|+++..+..++. ...+.++.... -..+.++++++.+++..+ ...--.++.++..++..
T Consensus 164 G~D~v~~~~~~~~~~~l~~---~~~~~~~~G~G-PRh~~f~pdg~~~Yv~~e-~s~~v~v~~~~~~~g~~ 228 (345)
T PF10282_consen 164 GADRVYVYDIDDDTGKLTP---VDSIKVPPGSG-PRHLAFSPDGKYAYVVNE-LSNTVSVFDYDPSDGSL 228 (345)
T ss_dssp TTTEEEEEEE-TTS-TEEE---EEEEECSTTSS-EEEEEE-TTSSEEEEEET-TTTEEEEEEEETTTTEE
T ss_pred CCCEEEEEEEeCCCceEEE---eeccccccCCC-CcEEEEcCCcCEEEEecC-CCCcEEEEeecccCCce
Confidence 7778999998754432322 12233333221 112446778776655544 33333445555445653
No 199
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.24 E-value=0.027 Score=52.74 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=95.3
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee----cccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT----PRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~----~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
...+|||++|+...-..+ ++++.+++.|. +.... +...|.. ..|+|+|+..|+....++ .+.++..+.
T Consensus 150 a~~tP~~~~l~v~DLG~D--ri~~y~~~dg~-L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s----tV~v~~y~~ 222 (346)
T COG2706 150 ANFTPDGRYLVVPDLGTD--RIFLYDLDDGK-LTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS----TVDVLEYNP 222 (346)
T ss_pred eeeCCCCCEEEEeecCCc--eEEEEEcccCc-cccccccccCCCCCcceEEEcCCCcEEEEEeccCC----EEEEEEEcC
Confidence 468999999887654433 45666666775 33322 2222433 349999998888887632 343333322
Q ss_pred C-CCce---E--EEcCCC--CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCC
Q 010654 112 T-SETT---V--LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE 183 (505)
Q Consensus 112 ~-~~~~---~--~~~~~~--~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 183 (505)
. ++.+ . .++.+. +....++..+.|+.++++...+...+.+|.++..++.+..+. .. +.....-.+++
T Consensus 223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~----~~-~teg~~PR~F~ 297 (346)
T COG2706 223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVG----IT-PTEGQFPRDFN 297 (346)
T ss_pred CCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEE----Ee-ccCCcCCccce
Confidence 1 2211 1 233332 234568889999888888777888899999986655332110 00 11111123456
Q ss_pred CcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 184 SVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 184 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
+++.++.++ ..+--..--.+|.++..+|+
T Consensus 298 i~~~g~~Li-aa~q~sd~i~vf~~d~~TG~ 326 (346)
T COG2706 298 INPSGRFLI-AANQKSDNITVFERDKETGR 326 (346)
T ss_pred eCCCCCEEE-EEccCCCcEEEEEEcCCCce
Confidence 666667554 44444444788999988887
No 200
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.22 E-value=0.044 Score=53.88 Aligned_cols=185 Identities=9% Similarity=0.027 Sum_probs=89.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg 87 (505)
.+|.+.|..|. +....++. ....-.....|||||++++... ...|-++|+.+++..+.+.-........+|+||
T Consensus 16 ~~v~viD~~t~--~~~~~i~~-~~~~h~~~~~s~Dgr~~yv~~r---dg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG 89 (369)
T PF02239_consen 16 GSVAVIDGATN--KVVARIPT-GGAPHAGLKFSPDGRYLYVANR---DGTVSVIDLATGKVVATIKVGGNPRGIAVSPDG 89 (369)
T ss_dssp TEEEEEETTT---SEEEEEE--STTEEEEEE-TT-SSEEEEEET---TSEEEEEETTSSSEEEEEE-SSEEEEEEE--TT
T ss_pred CEEEEEECCCC--eEEEEEcC-CCCceeEEEecCCCCEEEEEcC---CCeEEEEECCcccEEEEEecCCCcceEEEcCCC
Confidence 45777886653 22333332 2223445678999999877532 357999999998734444433322334599999
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-----CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCccc
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-----ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK 162 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~ 162 (505)
++++...... ..+.++|.++....+.+-+.. ....+..+.-++.+-.|+++.....++++++.... ..+.
T Consensus 90 ~~~~v~n~~~----~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~-~~~~ 164 (369)
T PF02239_consen 90 KYVYVANYEP----GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP-KNLK 164 (369)
T ss_dssp TEEEEEEEET----TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS-SCEE
T ss_pred CEEEEEecCC----CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc-cccc
Confidence 9987665432 378888977632222111110 11223444444543323333222356788876421 1110
Q ss_pred ccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 163 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...+..... ..+..++++++.++...... ..+-.++.++++
T Consensus 165 ----~~~i~~g~~---~~D~~~dpdgry~~va~~~s---n~i~viD~~~~k 205 (369)
T PF02239_consen 165 ----VTTIKVGRF---PHDGGFDPDGRYFLVAANGS---NKIAVIDTKTGK 205 (369)
T ss_dssp ----EEEEE--TT---EEEEEE-TTSSEEEEEEGGG---TEEEEEETTTTE
T ss_pred ----eeeeccccc---ccccccCcccceeeeccccc---ceeEEEeeccce
Confidence 011111011 11234567788665544433 277888877765
No 201
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.16 E-value=0.0019 Score=57.99 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.||++||-.+. ....|......|.++||. |+..+|-..... . ..... .........+.+.|+.+++. .-.
T Consensus 3 PVVlVHG~~~~-~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~-~-~~~~~--~~~~~~~~~l~~fI~~Vl~~--TGa 75 (219)
T PF01674_consen 3 PVVLVHGTGGN-AYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS-P-SVQNA--HMSCESAKQLRAFIDAVLAY--TGA 75 (219)
T ss_dssp -EEEE--TTTT-TCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH-T-HHHHH--HB-HHHHHHHHHHHHHHHHH--HT-
T ss_pred CEEEECCCCcc-hhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC-C-ccccc--ccchhhHHHHHHHHHHHHHh--hCC
Confidence 37888997542 344577788999999999 799998433321 1 11100 11123346666677766654 224
Q ss_pred CcEEEEeeChHHHHHHHHHhh
Q 010654 342 EKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~ 362 (505)
||=|+|||+||.++-+++..
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHH
T ss_pred -EEEEEEcCCcCHHHHHHHHH
Confidence 89999999999999888753
No 202
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.15 E-value=0.017 Score=54.04 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=75.6
Q ss_pred EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee-ccccce-eEEeeeeCCEEEEEEcCCCCCC
Q 010654 24 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGV-DTAASHRGNHFFITRRSDELFN 101 (505)
Q Consensus 24 ~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~-~~~~s~dg~~l~~~~~~~~~~~ 101 (505)
.|+..+.....-+.+|-+||..++ ..+...+.+.+.|.+++. ..+|. .+..|. ..-|||||.+|+-.+-+ . .
T Consensus 188 qvl~~pgh~pVtsmqwn~dgt~l~--tAS~gsssi~iWdpdtg~-~~pL~~~glgg~slLkwSPdgd~lfaAt~d-a--v 261 (445)
T KOG2139|consen 188 QVLQDPGHNPVTSMQWNEDGTILV--TASFGSSSIMIWDPDTGQ-KIPLIPKGLGGFSLLKWSPDGDVLFAATCD-A--V 261 (445)
T ss_pred hheeCCCCceeeEEEEcCCCCEEe--ecccCcceEEEEcCCCCC-cccccccCCCceeeEEEcCCCCEEEEeccc-c--e
Confidence 355555444455789999998754 445567788889999987 55555 333444 34599999987766644 1 1
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.+|+-..-. -..++|.+... .+....|++.+-++.+..-+.+.++.+..+
T Consensus 262 frlw~e~q~-wt~erw~lgsg---rvqtacWspcGsfLLf~~sgsp~lysl~f~ 311 (445)
T KOG2139|consen 262 FRLWQENQS-WTKERWILGSG---RVQTACWSPCGSFLLFACSGSPRLYSLTFD 311 (445)
T ss_pred eeeehhccc-ceecceeccCC---ceeeeeecCCCCEEEEEEcCCceEEEEeec
Confidence 344422211 13567877665 577888998765555555555655544443
No 203
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.14 E-value=0.0039 Score=56.66 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=55.6
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHH--------HHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSL--------LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLI 334 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l--------~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 334 (505)
...||++||..++... +......+ ....+.++.+|+..... .+ .+..-....+-+..+++++.
T Consensus 4 g~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s---~~----~g~~l~~q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELS---AF----HGRTLQRQAEFLAEAIKYIL 74 (225)
T ss_pred CCEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCcccc---cc----ccccHHHHHHHHHHHHHHHH
Confidence 3678999996554221 11111111 11257788888764221 11 01111122344555666665
Q ss_pred HcC---CCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEec
Q 010654 335 KNC---YCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAA 373 (505)
Q Consensus 335 ~~~---~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~ 373 (505)
+.. ...+++|.++||||||.++-.++...+ +.++.+|..
T Consensus 75 ~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl 119 (225)
T PF07819_consen 75 ELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITL 119 (225)
T ss_pred HhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEE
Confidence 542 456789999999999988887776533 245555543
No 204
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=97.12 E-value=0.12 Score=46.73 Aligned_cols=183 Identities=11% Similarity=0.076 Sum_probs=103.3
Q ss_pred CCCCceEEEEECCCCCCC---CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-eeccccce
Q 010654 4 ILRPDKAWLHKLEADQSN---DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGV 79 (505)
Q Consensus 4 ~~r~~~l~~~~lgt~~~~---~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~~~~~ 79 (505)
+.|.-.+..|+|..+..+ ..+.|++ ...|..+...|+||.+.+ +.+. ...+.+.|+.+++ .++ +..+....
T Consensus 34 asrDk~ii~W~L~~dd~~~G~~~r~~~G-HsH~v~dv~~s~dg~~al-S~sw--D~~lrlWDl~~g~-~t~~f~GH~~dV 108 (315)
T KOG0279|consen 34 ASRDKTIIVWKLTSDDIKYGVPVRRLTG-HSHFVSDVVLSSDGNFAL-SASW--DGTLRLWDLATGE-STRRFVGHTKDV 108 (315)
T ss_pred cccceEEEEEEeccCccccCceeeeeec-cceEecceEEccCCceEE-eccc--cceEEEEEecCCc-EEEEEEecCCce
Confidence 457777999999655322 2344554 345666899999999854 3222 2357888999986 444 33333222
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC-CceeeEEEEeCC--E-EEEEEecCCeeEEEEEEc
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFID--H-LAVYEREGGLQKITTYRL 154 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~d--~-l~~~~~~~~~~~l~~~~~ 154 (505)
...+|+|.++|.=-+ ++ .-|.+.+..+ .-...+.++. ...+.-+.|.++ . +++.+..+. .+.++++
T Consensus 109 lsva~s~dn~qivSGS-rD----kTiklwnt~g--~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk--tvKvWnl 179 (315)
T KOG0279|consen 109 LSVAFSTDNRQIVSGS-RD----KTIKLWNTLG--VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK--TVKVWNL 179 (315)
T ss_pred EEEEecCCCceeecCC-Cc----ceeeeeeecc--cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc--eEEEEcc
Confidence 245999998866333 22 2455566543 2222233332 335677788876 3 344444443 4677887
Q ss_pred CCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 155 PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. +.++ .-.++.....+.....||||... .+-..-.++++.+++.++
T Consensus 180 ~--~~~l-------~~~~~gh~~~v~t~~vSpDGslc----asGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 180 R--NCQL-------RTTFIGHSGYVNTVTVSPDGSLC----ASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred C--Ccch-------hhccccccccEEEEEECCCCCEE----ecCCCCceEEEEEccCCc
Confidence 6 2222 11233332233335568888832 234556678888887766
No 205
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.11 E-value=0.0034 Score=58.77 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=69.9
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHH---HCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHH----HHHHHHHH
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLL---DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFI----ACAEYLIK 335 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~----~~~~~l~~ 335 (505)
.++|+++-|-||-.. .|......|. ...|.|+.+.+.|.......- . .........++|.+ +.++.++.
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~-~-~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNS-K-FSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccc-c-ccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 478999999887432 1333334444 348999999999876543320 0 00112223344443 44444444
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCC---CceeEEEecCCch
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFV 377 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p---~~~~a~v~~~~~~ 377 (505)
.......++.++|||.|+|+++.++.+.+ ..++.++...|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 32113468999999999999999999988 5777888777753
No 206
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.10 E-value=0.007 Score=60.50 Aligned_cols=166 Identities=18% Similarity=0.170 Sum_probs=95.0
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHH-CCcE--EEEEcccCC-CCCchhHHHcccccCCcchHHHHHHHHHHHHH--
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFI--FAIAQIRGG-GELGRQWYENGKFLKKKNTFTDFIACAEYLIK-- 335 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~-~G~~--v~~~d~rG~-~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-- 335 (505)
-.|+++.+||.+...-...|...++.+.+ .|-+ |..+|++-. || ..-....+-+..+.++.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhh
Confidence 35899999998833323334444443333 3433 333444311 11 1111223444445553332
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCcccccccCCCCCHHHHHHHHhCCh
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 415 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 415 (505)
.+..--..|.++|+|+|..+++.+.....|.+-.++.+.++.+-. . .-+ -|. .|+.
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~--v---dgp--------rgi-rDE~---------- 299 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT--V---DGP--------RGI-RDEA---------- 299 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccC--C---Ccc--------cCC-cchh----------
Confidence 244444689999999998888777766666554444443332210 0 000 011 1211
Q ss_pred hhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC
Q 010654 416 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 472 (505)
Q Consensus 416 ~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 472 (505)
+. .++.| +|++.|.+|.+|++..-+++.+++++ +++++++. +++|.+
T Consensus 300 Ll---dmk~P-VLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~---~adhsm 346 (784)
T KOG3253|consen 300 LL---DMKQP-VLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIG---GADHSM 346 (784)
T ss_pred hH---hcCCc-eEEEecCCcccCCHHHHHHHHHHhhc---cceEEEec---CCCccc
Confidence 12 23455 99999999999999999999998886 45788887 889965
No 207
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.96 E-value=0.0078 Score=55.56 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=39.6
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.+| -|.+.+..|..+|+.+.+++++..++.|.+++...|+ +..|
T Consensus 178 ~~p-~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~---~S~H 221 (240)
T PF05705_consen 178 RCP-RLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE---DSPH 221 (240)
T ss_pred CCC-eEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC---CCch
Confidence 566 8999999999999999999999999999999999998 4555
No 208
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.95 E-value=0.0055 Score=60.16 Aligned_cols=132 Identities=17% Similarity=0.114 Sum_probs=83.1
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC--chhHHHHHH-CCcEEEEEcccCCCCC---chhHHHccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF--NSSRLSLLD-RGFIFAIAQIRGGGEL---GRQWYENGK 315 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~--~~~~~~l~~-~G~~v~~~d~rG~~~~---g~~~~~~~~ 315 (505)
.+..-+=+.+.+.... ....|+.|++-|-......+.- ...+..||+ .|-.|+...+|--|.. +.--....+
T Consensus 67 ~~~~~Qq~~y~n~~~~--~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk 144 (514)
T KOG2182|consen 67 NGKFFQQRFYNNNQWA--KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLK 144 (514)
T ss_pred hhhhhhhheeeccccc--cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchh
Confidence 3333333345555441 2346899999653222212211 122345555 5999999999955522 110001111
Q ss_pred ccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 316 FLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 316 ~~~~~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
...-.+.+.|+...++.+..+ +.-|+.+...+|+||-|.|++|.-..+|++..++|+.++
T Consensus 145 ~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 145 YLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 222336789999998888776 466667999999999999999999999999888887655
No 209
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=96.95 E-value=0.42 Score=46.33 Aligned_cols=116 Identities=9% Similarity=0.133 Sum_probs=60.8
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCC-CCceeee--eccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSK-PEELRVL--TPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~-~~~~~~l--~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
....++|||++|+..... .+.+.++++++ +...+.+ .+...+. ...++|||+++++....+ ..|.+++++
T Consensus 83 ~~i~~~~~g~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~----~~v~v~d~~ 156 (330)
T PRK11028 83 THISTDHQGRFLFSASYN--ANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKE----DRIRLFTLS 156 (330)
T ss_pred eEEEECCCCCEEEEEEcC--CCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCC----CEEEEEEEC
Confidence 356789999998766433 35566666653 3201111 1111111 223899999887765432 378888876
Q ss_pred CCCCce----EEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSETT----VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~----~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+... ..+.-........+.+++|+-+++....+...+.+|+++.
T Consensus 157 ~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 157 DDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred CCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 422110 0111111222446777777433333333346688888863
No 210
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.93 E-value=0.0017 Score=64.85 Aligned_cols=88 Identities=19% Similarity=0.238 Sum_probs=60.7
Q ss_pred CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 010654 279 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 358 (505)
Q Consensus 279 ~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~ 358 (505)
..|......|.+.||.+ ..|.+|.+ .+|+.. ......++++...++.+.+... ..+|.|+||||||.++..
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~g---YDwR~~---~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFG---YDFRQS---NRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCC---CCcccc---ccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHH
Confidence 34666778899999976 67888655 445532 1122446777777777766522 368999999999999999
Q ss_pred HHhhCCCc----eeEEEecCC
Q 010654 359 VLNMRPDL----FKAAVAAVP 375 (505)
Q Consensus 359 ~~~~~p~~----~~a~v~~~~ 375 (505)
++..+|+. ++..|+.++
T Consensus 179 fl~~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HHHHCCHhHHhHhccEEEECC
Confidence 88888864 355555444
No 211
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.92 E-value=0.0023 Score=39.99 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=22.5
Q ss_pred eEEEEEEeCCCcEEEEEeccc--cceEEEE
Q 010654 33 YSLGLQASESKKFLFIASESK--ITRFVFY 60 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~--~~~~l~~ 60 (505)
....+.|||||++|+|.+... ...+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 566889999999999998877 6777774
No 212
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.88 E-value=0.011 Score=59.58 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=73.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC---------c--------hhHHHHHHCCcEEEEEcccCC
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF---------N--------SSRLSLLDRGFIFAIAQIRGG 303 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~---------~--------~~~~~l~~~G~~v~~~d~rG~ 303 (505)
..+..+..|++...+ ...+.|+||++.||||.+...+. . .....|.+. ..++.+|.+-+
T Consensus 21 ~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvG 96 (415)
T PF00450_consen 21 NENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVG 96 (415)
T ss_dssp TTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STT
T ss_pred CCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCc
Confidence 356678766443332 23567999999999986532110 0 011245554 67888996655
Q ss_pred CCCchhHHHcccccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHH----hhC------CCceeEEEe
Q 010654 304 GELGRQWYENGKFLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVL----NMR------PDLFKAAVA 372 (505)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~----~~~------p~~~~a~v~ 372 (505)
.||...-........-....+|+..++.. +...+......+.|+|.||||..+-.++ ... .=.+++++.
T Consensus 97 tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~I 176 (415)
T PF00450_consen 97 TGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAI 176 (415)
T ss_dssp STT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEE
T ss_pred eEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccccee
Confidence 55433211111111112455666666654 4444555556899999999998654443 323 224889999
Q ss_pred cCCchhh
Q 010654 373 AVPFVDV 379 (505)
Q Consensus 373 ~~~~~d~ 379 (505)
..|++|.
T Consensus 177 Gng~~dp 183 (415)
T PF00450_consen 177 GNGWIDP 183 (415)
T ss_dssp ESE-SBH
T ss_pred cCccccc
Confidence 9998764
No 213
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.84 E-value=0.0028 Score=55.19 Aligned_cols=106 Identities=16% Similarity=0.090 Sum_probs=75.4
Q ss_pred cEEEEEcCCCCcCCC--CCCchhHHHHHHCCcEEEEEcccCCC-CCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCC
Q 010654 264 PLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 340 (505)
Q Consensus 264 P~iv~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~~-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 340 (505)
-.||++ ||-+.... +.-.+...+|-+.+|..+.+..|.|- |||.-- -..+.+|+..+++++...++-
T Consensus 37 ~~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s--------lk~D~edl~~l~~Hi~~~~fS- 106 (299)
T KOG4840|consen 37 VKVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS--------LKDDVEDLKCLLEHIQLCGFS- 106 (299)
T ss_pred EEEEEE-cccCCCccccccHHHHHHHHhhccceeeeeecccccccccccc--------ccccHHHHHHHHHHhhccCcc-
Confidence 455666 54443322 22233456888899999999988664 355421 226789999999998877653
Q ss_pred CCcEEEEeeChHHHHHHHHHhh--CCCceeEEEecCCchhhh
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVDVL 380 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~--~p~~~~a~v~~~~~~d~~ 380 (505)
..|.++|||-|..-.++++++ .+..+.|+|+.+|+.|-.
T Consensus 107 -t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 -TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred -cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 489999999999988888743 245678999999998854
No 214
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=96.82 E-value=0.061 Score=52.86 Aligned_cols=139 Identities=13% Similarity=0.104 Sum_probs=78.4
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCC----------ceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDD----------IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP 74 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~----------~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~ 74 (505)
+||.|=||---+... ...-+|++++= .|.-..+.||||++++-... ...+|++|-.+|+.+..|-.
T Consensus 155 ~KpsRPfRi~T~sdD-n~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs---Dgki~iyDGktge~vg~l~~ 230 (603)
T KOG0318|consen 155 FKPSRPFRIATGSDD-NTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS---DGKIYIYDGKTGEKVGELED 230 (603)
T ss_pred ccCCCceEEEeccCC-CeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC---CccEEEEcCCCccEEEEecC
Confidence 455555555444432 34456665441 23335789999998653322 34689999888863444432
Q ss_pred --cccceeE--EeeeeCCEEEEEEcCCCCCCceEEEeeCCCC-CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEE
Q 010654 75 --RVVGVDT--AASHRGNHFFITRRSDELFNSELLACPVDNT-SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKI 149 (505)
Q Consensus 75 --~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l 149 (505)
...|..| .||||+++++=.+.+ ...+|+ |+++. -..+|.+...-+-..-+..|.+|.|+.+...+ .+
T Consensus 231 ~~aHkGsIfalsWsPDs~~~~T~SaD---kt~KIW--dVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G---~i 302 (603)
T KOG0318|consen 231 SDAHKGSIFALSWSPDSTQFLTVSAD---KTIKIW--DVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSG---TI 302 (603)
T ss_pred CCCccccEEEEEECCCCceEEEecCC---ceEEEE--EeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCc---EE
Confidence 1234444 399999998876643 123444 44331 23455555443333457788888877665543 34
Q ss_pred EEEEcC
Q 010654 150 TTYRLP 155 (505)
Q Consensus 150 ~~~~~~ 155 (505)
.+++.+
T Consensus 303 n~ln~~ 308 (603)
T KOG0318|consen 303 NYLNPS 308 (603)
T ss_pred EEeccc
Confidence 556543
No 215
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.79 E-value=0.086 Score=50.43 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=77.8
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-CchhHHHHHHCCcEEEEEcccCCCC-CchhHH-------
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGE-LGRQWY------- 311 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~-~g~~~~------- 311 (505)
.++.+..+ |++|... ..+.-+||++||.......+. .......|.+.||+++.+..+.--. .-..+.
T Consensus 69 ~~~~~fla-L~~~~~~---~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~ 144 (310)
T PF12048_consen 69 AGEERFLA-LWRPANS---AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVP 144 (310)
T ss_pred cCCEEEEE-EEecccC---CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCC
Confidence 35566644 4777654 355779999998654443222 2344578999999999988765110 000000
Q ss_pred Hccc---------------------ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC-ceeE
Q 010654 312 ENGK---------------------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKA 369 (505)
Q Consensus 312 ~~~~---------------------~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a 369 (505)
.++. .......+.-+.+++.++..++. .++.|+|++.|+++++.++...+. ...+
T Consensus 145 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~~~~~~da 221 (310)
T PF12048_consen 145 SAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEKPPPMPDA 221 (310)
T ss_pred CCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcCCCcccCe
Confidence 0000 00011234455567777777763 458999999999999999887654 3567
Q ss_pred EEecCC
Q 010654 370 AVAAVP 375 (505)
Q Consensus 370 ~v~~~~ 375 (505)
.|...+
T Consensus 222 LV~I~a 227 (310)
T PF12048_consen 222 LVLINA 227 (310)
T ss_pred EEEEeC
Confidence 777665
No 216
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.78 E-value=0.38 Score=49.39 Aligned_cols=154 Identities=9% Similarity=0.043 Sum_probs=90.6
Q ss_pred CCCCCceEEEEECCCCCCCCeEEEEec---CC-ceE-E-EEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC-ceeeee
Q 010654 3 EILRPDKAWLHKLEADQSNDICLYHEK---DD-IYS-L-GLQASESKKFLFIASESK--ITRFVFYLDVSKPE-ELRVLT 73 (505)
Q Consensus 3 ~~~r~~~l~~~~lgt~~~~~~~~~~~~---~~-~~~-~-~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~-~~~~l~ 73 (505)
+...++-+|......+....+.|++.+ .+ +|+ + .++.|||+++++++.... ..-.|.+.|+.+|. .+..+.
T Consensus 94 ~~g~~y~~~~R~~~~g~~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~ 173 (682)
T COG1770 94 EEGKEYPIYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEIT 173 (682)
T ss_pred cCCCcceeEEeccCCCCCceeEeecchhccCcccceeeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhc
Confidence 444555566663333322244555432 12 444 3 578999999999987654 35678888999986 112222
Q ss_pred ccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc-CCCCceeeEEEE--eCCEEEEEEecCCeeEEE
Q 010654 74 PRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQL--FIDHLAVYEREGGLQKIT 150 (505)
Q Consensus 74 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~d~l~~~~~~~~~~~l~ 150 (505)
.. +....|.+|++.++|.+.....-..+|++..+.+......++- +..+...-.+.- +++.+++.......++++
T Consensus 174 ~~--~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ 251 (682)
T COG1770 174 NT--SGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVR 251 (682)
T ss_pred cc--ccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEE
Confidence 11 2234599999999999877543346888888876333333343 333322222222 334677777666677888
Q ss_pred EEEcCCCC
Q 010654 151 TYRLPAVG 158 (505)
Q Consensus 151 ~~~~~~~~ 158 (505)
+++.+..+
T Consensus 252 ll~a~~p~ 259 (682)
T COG1770 252 LLDADDPE 259 (682)
T ss_pred EEecCCCC
Confidence 88876433
No 217
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.77 E-value=0.02 Score=49.61 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=61.6
Q ss_pred EEEEeCCccCCCCCCcEEEEEcCCCCcCCC---------CCCc-----hhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 249 CIVYRKNLVKLDGSDPLLLYGYGSYEICND---------PAFN-----SSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 249 ~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~---------~~~~-----~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
+++..++. ...+..++|++||..-.... ...+ +....-.+.||-|++.|.-- -++|.+.-
T Consensus 89 FiF~s~~~--lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----~~kfye~k 162 (297)
T KOG3967|consen 89 FIFMSEDA--LTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----ERKFYEKK 162 (297)
T ss_pred eEEEChhH--hcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----hhhhhhcc
Confidence 44555553 23456799999996422111 0111 12234456799888888641 22233211
Q ss_pred cc--cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCc
Q 010654 315 KF--LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL 366 (505)
Q Consensus 315 ~~--~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~ 366 (505)
.. ..-...++-+.-+-.+++.. ..++.|+++.|||||++++-++.+.|+.
T Consensus 163 ~np~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 163 RNPQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred cCcchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 10 01113344444444444332 3467899999999999999999998763
No 218
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=96.69 E-value=0.067 Score=47.62 Aligned_cols=139 Identities=12% Similarity=0.057 Sum_probs=72.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeeccc--ccee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRV--VGVD 80 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~--~~~~ 80 (505)
+.-+|++|||++.+-..+++ .|+ ..+..++..-|||++++.. +++ ..+|+.++-+.. ++.++.+-. .+..
T Consensus 144 qsg~irvWDl~~~~c~~~li-Pe~-~~~i~sl~v~~dgsml~a~-nnk--G~cyvW~l~~~~~~s~l~P~~k~~ah~~~i 218 (311)
T KOG0315|consen 144 QSGNIRVWDLGENSCTHELI-PED-DTSIQSLTVMPDGSMLAAA-NNK--GNCYVWRLLNHQTASELEPVHKFQAHNGHI 218 (311)
T ss_pred CCCcEEEEEccCCccccccC-CCC-CcceeeEEEcCCCcEEEEe-cCC--ccEEEEEccCCCccccceEhhheecccceE
Confidence 45579999999875444433 332 2345578899999997643 333 346666655543 334433221 1222
Q ss_pred --EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 81 --TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 81 --~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+|||+++|+-.+.+. .++..+.+++-..+-.++.. .+.+-+...+.|+-|++..... ....++++..
T Consensus 219 l~C~lSPd~k~lat~ssdk-----tv~iwn~~~~~kle~~l~gh-~rWvWdc~FS~dg~YlvTassd-~~~rlW~~~~ 289 (311)
T KOG0315|consen 219 LRCLLSPDVKYLATCSSDK-----TVKIWNTDDFFKLELVLTGH-QRWVWDCAFSADGEYLVTASSD-HTARLWDLSA 289 (311)
T ss_pred EEEEECCCCcEEEeecCCc-----eEEEEecCCceeeEEEeecC-CceEEeeeeccCccEEEecCCC-Cceeeccccc
Confidence 23999999988666541 34444444421111122222 1223344445565444433222 3456677764
No 219
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.68 E-value=0.68 Score=44.88 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=47.3
Q ss_pred EEeCCCcEEEEEecc-------ccceEEEEEeCCCCCceeeee-ccc-c---c---eeEEeeeeCCEEEEEEcCCCCCCc
Q 010654 38 QASESKKFLFIASES-------KITRFVFYLDVSKPEELRVLT-PRV-V---G---VDTAASHRGNHFFITRRSDELFNS 102 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~-------~~~~~l~~~d~~~~~~~~~l~-~~~-~---~---~~~~~s~dg~~l~~~~~~~~~~~~ 102 (505)
..||||+.|++...- .+...|-++|+++.+....+. +.. . + ..+.+||||+++|+.... +..
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~---p~~ 128 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFS---PSP 128 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCC---CCC
Confidence 489999998877651 135678899999987233332 111 1 1 134599999998877533 235
Q ss_pred eEEEeeCCC
Q 010654 103 ELLACPVDN 111 (505)
Q Consensus 103 ~l~~~~~~~ 111 (505)
.+-++|++.
T Consensus 129 ~V~VvD~~~ 137 (352)
T TIGR02658 129 AVGVVDLEG 137 (352)
T ss_pred EEEEEECCC
Confidence 888999876
No 220
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.67 E-value=0.39 Score=44.39 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=75.4
Q ss_pred EEEEECCCCCCCCeEEEEec--C-CceEE-EEEEeCCCcEEEEEeccc----cc--eEEEEEeCCCCCceeeeeccccce
Q 010654 10 AWLHKLEADQSNDICLYHEK--D-DIYSL-GLQASESKKFLFIASESK----IT--RFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~--~-~~~~~-~~~~SpDg~~i~~~~~~~----~~--~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
+.+.++.++ +.+.+.+.. . +.... +....|||+ |.++.... .. ..||+++.+ ++ .+.+.......
T Consensus 62 ~~~~d~~~g--~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~~~~~~~p 136 (246)
T PF08450_consen 62 IAVVDPDTG--KVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVVADGLGFP 136 (246)
T ss_dssp EEEEETTTT--EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEEEEEESSE
T ss_pred eEEEecCCC--cEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce-EEEEecCcccc
Confidence 344477664 344555542 1 23333 678999999 55554332 12 689999998 54 55554332221
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC----ceEEEcCCC-CceeeEEEEeCC-EEEEEEecCCeeEEEEE
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE----TTVLIPHRE-SVKLQDIQLFID-HLAVYEREGGLQKITTY 152 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~-~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~ 152 (505)
-..|+|||+.||+.... ..+|++++++..+. .+....... ...+.+++.+.+ .|+++...+ .++.++
T Consensus 137 NGi~~s~dg~~lyv~ds~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~--~~I~~~ 210 (246)
T PF08450_consen 137 NGIAFSPDGKTLYVADSF----NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGG--GRIVVF 210 (246)
T ss_dssp EEEEEETTSSEEEEEETT----TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETT--TEEEEE
T ss_pred cceEECCcchheeecccc----cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCC--CEEEEE
Confidence 23499999999987654 24899999864222 121222222 224678888876 455554433 456777
Q ss_pred EcC
Q 010654 153 RLP 155 (505)
Q Consensus 153 ~~~ 155 (505)
+.+
T Consensus 211 ~p~ 213 (246)
T PF08450_consen 211 DPD 213 (246)
T ss_dssp ETT
T ss_pred CCC
Confidence 754
No 221
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.58 E-value=0.48 Score=43.70 Aligned_cols=130 Identities=9% Similarity=0.011 Sum_probs=81.5
Q ss_pred EEEEEECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC---CCCC-CchhHHHHHHCCcEEEEEcccCCCCCchh
Q 010654 234 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC---NDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQ 309 (505)
Q Consensus 234 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~---~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~~g~~ 309 (505)
++..+.+.-|. ++..++- ++.++.|+|+..|.-.-.. .... ..+..+.+.++ |.|+-+|.+|.-.-...
T Consensus 23 ~e~~V~T~~G~-v~V~V~G-----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~ 95 (326)
T KOG2931|consen 23 QEHDVETAHGV-VHVTVYG-----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS 95 (326)
T ss_pred eeeeecccccc-EEEEEec-----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc
Confidence 33444555564 6555432 2234678899999743221 1111 22445677778 99999999987532222
Q ss_pred HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 310 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 310 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+. ....--.++|+.+-+-.+.+.-.+ +.|.-+|--+|+|+.+..|..||+++-+.|...+.
T Consensus 96 ~p----~~y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 96 FP----EGYPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred CC----CCCCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 21 111124556666666665554222 56778899999999999999999999999987653
No 222
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=96.53 E-value=0.034 Score=53.62 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=78.1
Q ss_pred CCceEEEEECCCCCCCCe-EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce--eEE
Q 010654 6 RPDKAWLHKLEADQSNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTA 82 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~-~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~--~~~ 82 (505)
|..-+|.|||.+.+.+.. +++.- ...+.-.+..|+|+.+|++..+ ...|+++...++. +..-..- .|. .+.
T Consensus 278 rrky~ysyDle~ak~~k~~~~~g~-e~~~~e~FeVShd~~fia~~G~---~G~I~lLhakT~e-li~s~Ki-eG~v~~~~ 351 (514)
T KOG2055|consen 278 RRKYLYSYDLETAKVTKLKPPYGV-EEKSMERFEVSHDSNFIAIAGN---NGHIHLLHAKTKE-LITSFKI-EGVVSDFT 351 (514)
T ss_pred cceEEEEeeccccccccccCCCCc-ccchhheeEecCCCCeEEEccc---CceEEeehhhhhh-hhheeee-ccEEeeEE
Confidence 445589999977643221 22221 1224446789999999988654 3468999888875 2211111 233 344
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
||-||+.|+..... +.+|+.|+....-.. .+..+....-..++.+.+.-+++.-.+ ..-+.+|+.+
T Consensus 352 fsSdsk~l~~~~~~-----GeV~v~nl~~~~~~~-rf~D~G~v~gts~~~S~ng~ylA~GS~-~GiVNIYd~~ 417 (514)
T KOG2055|consen 352 FSSDSKELLASGGT-----GEVYVWNLRQNSCLH-RFVDDGSVHGTSLCISLNGSYLATGSD-SGIVNIYDGN 417 (514)
T ss_pred EecCCcEEEEEcCC-----ceEEEEecCCcceEE-EEeecCccceeeeeecCCCceEEeccC-cceEEEeccc
Confidence 89999888877543 389999987522111 222222222235565666545554333 2346778754
No 223
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.53 E-value=0.74 Score=43.47 Aligned_cols=189 Identities=14% Similarity=0.218 Sum_probs=101.1
Q ss_pred EEEEECCCCCCC--Ce-EEEEecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccc-cc---ee
Q 010654 10 AWLHKLEADQSN--DI-CLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRV-VG---VD 80 (505)
Q Consensus 10 l~~~~lgt~~~~--~~-~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~-~~---~~ 80 (505)
|+.|++-+..++ .. ++.+..+|.| ..|+|++|.|+...... ..-..|.+|-++|. +..+-... .| ..
T Consensus 18 I~v~~ld~~~g~l~~~~~v~~~~npty---l~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p~y 93 (346)
T COG2706 18 IYVFNLDTKTGELSLLQLVAELGNPTY---LAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGR-LTFLNRQTLPGSPPCY 93 (346)
T ss_pred eEEEEEeCcccccchhhhccccCCCce---EEECCCCCEEEEEEecCCcCcEEEEEEcCCCCe-EEEeeccccCCCCCeE
Confidence 777777543332 22 2223333443 37899999876665542 34567888877776 65553221 12 23
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE---EEcCCCC--------ceeeEEEEeCCEEEEEEecCCeeEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRES--------VKLQDIQLFIDHLAVYEREGGLQKI 149 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~--------~~i~~~~~~~d~l~~~~~~~~~~~l 149 (505)
.+++++|+.++..... . ..+-++++...|...- ++.+... .-......++++-+++..+-|..++
T Consensus 94 vsvd~~g~~vf~AnY~-~---g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 94 VSVDEDGRFVFVANYH-S---GSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred EEECCCCCEEEEEEcc-C---ceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 3488888766554433 2 3555666543222110 1221111 0023345567776666666678899
Q ss_pred EEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 150 TTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+|+++ +|. +++. .+..++...+ -..+.+.|+++ +++..+..+.--.++.++...++
T Consensus 170 ~~y~~~-dg~-L~~~---~~~~v~~G~G-PRHi~FHpn~k-~aY~v~EL~stV~v~~y~~~~g~ 226 (346)
T COG2706 170 FLYDLD-DGK-LTPA---DPAEVKPGAG-PRHIVFHPNGK-YAYLVNELNSTVDVLEYNPAVGK 226 (346)
T ss_pred EEEEcc-cCc-cccc---cccccCCCCC-cceEEEcCCCc-EEEEEeccCCEEEEEEEcCCCce
Confidence 999987 444 2211 1222222211 12245667766 55666666666677788766566
No 224
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.52 E-value=0.004 Score=60.74 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=70.2
Q ss_pred cEEEEEcCCCCcCCCCCCch-hHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---CC
Q 010654 264 PLLLYGYGSYEICNDPAFNS-SRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CY 338 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~ 338 (505)
-++|+++||.--...+..+. ....|+.. .-+|+.+|||-+ .+|--+.......-|.-.+-|..-|++|+.++ -.
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG-~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVG-AFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeec-cceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 38999999753332332221 12456665 458899999954 33332211111223445578888999999886 23
Q ss_pred CCCCcEEEEeeChHHHHH-HHHHhhC-CCceeEEEecCCchh
Q 010654 339 CTKEKLCIEGRSAGGLLI-GAVLNMR-PDLFKAAVAAVPFVD 378 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~-~~~~~~~-p~~~~a~v~~~~~~d 378 (505)
-||+||.++|.|+|+..+ +.+++-. -.+|+-+|+.+|-.+
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 589999999999997654 3333311 127888888777543
No 225
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.50 E-value=0.012 Score=53.84 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
.+..++|++||..... ........|.....|+ .++....+..|.. ..|.. ..........++...++.|.+..
T Consensus 16 ~~~~vlvfVHGyn~~f-~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~--d~~~a~~s~~~l~~~L~~L~~~~- 90 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSF-EDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFY--DRESARFSGPALARFLRDLARAP- 90 (233)
T ss_pred CCCeEEEEEeCCCCCH-HHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhh--hhhhHHHHHHHHHHHHHHHHhcc-
Confidence 4568999999964331 1111122233333344 7888888866542 22221 11122244566666667766652
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhh
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
...+|-|++||||+.+++.++..
T Consensus 91 -~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 91 -GIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred -CCceEEEEEeCchHHHHHHHHHH
Confidence 24799999999999998887654
No 226
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.45 E-value=0.012 Score=53.83 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCCCCc
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKEK 343 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~r 343 (505)
.|+++|++.++ ...|....+.+...++.|..+.++|.+... .....++++.+. ++.+.+... ...
T Consensus 2 ~lf~~p~~gG~--~~~y~~la~~l~~~~~~v~~i~~~~~~~~~----------~~~~si~~la~~y~~~I~~~~~--~gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGS--ASSYRPLARALPDDVIGVYGIEYPGRGDDE----------PPPDSIEELASRYAEAIRARQP--EGP 67 (229)
T ss_dssp EEEEESSTTCS--GGGGHHHHHHHTTTEEEEEEECSTTSCTTS----------HEESSHHHHHHHHHHHHHHHTS--SSS
T ss_pred eEEEEcCCccC--HHHHHHHHHhCCCCeEEEEEEecCCCCCCC----------CCCCCHHHHHHHHHHHhhhhCC--CCC
Confidence 57888887663 233555555555545889999988765211 111344444432 233333221 138
Q ss_pred EEEEeeChHHHHHHHHHhh
Q 010654 344 LCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~ 362 (505)
+.++|||+||.++.-+|.+
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eeehccCccHHHHHHHHHH
Confidence 9999999999998887754
No 227
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.42 E-value=0.022 Score=52.73 Aligned_cols=128 Identities=12% Similarity=0.074 Sum_probs=69.0
Q ss_pred EECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC---CCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcc
Q 010654 238 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC---NDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 314 (505)
Q Consensus 238 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~---~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~ 314 (505)
++++-| .|++.+. + +..++.|+||-.|.-.-.. ...-|+..........|.++-+|.+|..+-...+..
T Consensus 4 v~t~~G-~v~V~v~---G--~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-- 75 (283)
T PF03096_consen 4 VETPYG-SVHVTVQ---G--DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-- 75 (283)
T ss_dssp EEETTE-EEEEEEE---S--S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T--
T ss_pred eccCce-EEEEEEE---e--cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc--
Confidence 344555 4655533 1 2234689999999743211 111122222233345699999999998763333221
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCch
Q 010654 315 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 377 (505)
Q Consensus 315 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~ 377 (505)
...--.++++.+.+..+.+.-.+ +.+.-+|--+|+++.+..|..+|+++-+.|...+..
T Consensus 76 --~y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 76 --GYQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp --T-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred --cccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 11224556666655555554223 568889999999999999999999999999887743
No 228
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.40 E-value=0.069 Score=50.91 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=86.0
Q ss_pred cCCceEEEEEEeCCCcEEEEEecccc-ceEEEEEeCCCCC-ceeeeeccccceeEE-eeeeCCEEEEEEcCCCCCCceEE
Q 010654 29 KDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPE-ELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELL 105 (505)
Q Consensus 29 ~~~~~~~~~~~SpDg~~i~~~~~~~~-~~~l~~~d~~~~~-~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~l~ 105 (505)
.|+-|++ .+|++|++++-. +++ +.-+|.+..++.- -.+.+.....++.|- ||||.+++.--... -.+.
T Consensus 224 tdEVWfl--~FS~nGkyLAsa--SkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~-----e~~~ 294 (519)
T KOG0293|consen 224 TDEVWFL--QFSHNGKYLASA--SKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD-----EVLS 294 (519)
T ss_pred CCcEEEE--EEcCCCeeEeec--cCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch-----Hhee
Confidence 4555554 579999998633 333 3456666555431 123333444455554 99999977654433 1366
Q ss_pred EeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCc
Q 010654 106 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 185 (505)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (505)
+.|+.+ |...-..+.....++....|.+|+.-++.-... .++..++++ |.... -+.+. ..| . +..+..+
T Consensus 295 lwDv~t-gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d-r~i~~wdlD--gn~~~-~W~gv--r~~-~---v~dlait 363 (519)
T KOG0293|consen 295 LWDVDT-GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD-RTIIMWDLD--GNILG-NWEGV--RDP-K---VHDLAIT 363 (519)
T ss_pred eccCCc-chhhhhcccCcCCCcceeEEccCCceeEecCCC-CcEEEecCC--cchhh-ccccc--ccc-e---eEEEEEc
Confidence 667765 443323444434457789999997666554332 235566665 43211 11111 111 1 2234567
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCC
Q 010654 186 FSSRILRFHYSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 186 ~~~~~~~~~~~~~~~p~~~~~~~~~~ 211 (505)
+||..++... .-+.+..++.++
T Consensus 364 ~Dgk~vl~v~----~d~~i~l~~~e~ 385 (519)
T KOG0293|consen 364 YDGKYVLLVT----VDKKIRLYNREA 385 (519)
T ss_pred CCCcEEEEEe----cccceeeechhh
Confidence 8888877666 234556665543
No 229
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.39 E-value=0.0093 Score=59.27 Aligned_cols=88 Identities=19% Similarity=0.113 Sum_probs=64.8
Q ss_pred CCcEEEEEcCCCC-cCCCCCCchhHHHHHH-CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc---
Q 010654 262 SDPLLLYGYGSYE-ICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--- 336 (505)
Q Consensus 262 ~~P~iv~~hGg~~-~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 336 (505)
..-+|+++|||.- ++.........+.|+. .|.-|+.+||--..+ ...+...+.+.-|.-|++++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-----------aPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-----------APFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-----------CCCCcHHHHHHHHHHHHhcCHHH
Confidence 3568999999754 3444555566667766 599999999965443 33446778899999999886
Q ss_pred -CCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 337 -CYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 337 -~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
|+ ..+||++.|.|+||.++..++.
T Consensus 464 lG~-TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 464 LGS-TGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred hCc-ccceEEEeccCCCcceeehhHH
Confidence 43 3589999999999997655543
No 230
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.37 E-value=0.63 Score=42.97 Aligned_cols=183 Identities=14% Similarity=0.091 Sum_probs=91.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEe-CCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc----cc--
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQAS-ESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV----VG-- 78 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~S-pDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~----~~-- 78 (505)
...+|++++..++ ...++..+. ..+.... +||+.++- .. ..+.++|.++++ .+.+.... ..
T Consensus 20 ~~~~i~~~~~~~~---~~~~~~~~~---~~G~~~~~~~g~l~v~-~~----~~~~~~d~~~g~-~~~~~~~~~~~~~~~~ 87 (246)
T PF08450_consen 20 PGGRIYRVDPDTG---EVEVIDLPG---PNGMAFDRPDGRLYVA-DS----GGIAVVDPDTGK-VTVLADLPDGGVPFNR 87 (246)
T ss_dssp TTTEEEEEETTTT---EEEEEESSS---EEEEEEECTTSEEEEE-ET----TCEEEEETTTTE-EEEEEEEETTCSCTEE
T ss_pred CCCEEEEEECCCC---eEEEEecCC---CceEEEEccCCEEEEE-Ec----CceEEEecCCCc-EEEEeeccCCCcccCC
Confidence 3456788887653 233344322 3455555 78765443 22 234566988886 66555432 11
Q ss_pred -eeEEeeeeCCEEEEEEcCCCC--CC--ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 79 -VDTAASHRGNHFFITRRSDEL--FN--SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 79 -~~~~~s~dg~~l~~~~~~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
.+..++++|+ ||+....... .. .+||+++..+ ..+.+.. ... ...++.|++|+-.++..+....+++.|+
T Consensus 88 ~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~--~~~~~~~-~~~-~pNGi~~s~dg~~lyv~ds~~~~i~~~~ 162 (246)
T PF08450_consen 88 PNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG--KVTVVAD-GLG-FPNGIAFSPDGKTLYVADSFNGRIWRFD 162 (246)
T ss_dssp EEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS--EEEEEEE-EES-SEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred CceEEEcCCCC-EEEEecCCCccccccccceEEECCCC--eEEEEec-Ccc-cccceEECCcchheeecccccceeEEEe
Confidence 1234888887 7777654211 11 6899999873 3332322 222 3568999987533322333334578888
Q ss_pred cCCCCCcccccCCCce-eeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 154 LPAVGEPLKSLQGGKS-VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 154 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++..+..+.. .+. ..++.......++..+.+|. +++... ....|++++.. |+
T Consensus 163 ~~~~~~~~~~---~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~---~~~~I~~~~p~-G~ 215 (246)
T PF08450_consen 163 LDADGGELSN---RRVFIDFPGGPGYPDGLAVDSDGN-LWVADW---GGGRIVVFDPD-GK 215 (246)
T ss_dssp EETTTCCEEE---EEEEEE-SSSSCEEEEEEEBTTS--EEEEEE---TTTEEEEEETT-SC
T ss_pred ccccccceee---eeeEEEcCCCCcCCCcceEcCCCC-EEEEEc---CCCEEEEECCC-cc
Confidence 7643431210 011 12222111112233444554 444433 44688888876 55
No 231
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=96.32 E-value=0.29 Score=49.71 Aligned_cols=145 Identities=12% Similarity=0.077 Sum_probs=82.2
Q ss_pred CCCceEEEEECCCCCCC----CeEEEE--ecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--
Q 010654 5 LRPDKAWLHKLEADQSN----DICLYH--EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-- 76 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~----~~~~~~--~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-- 76 (505)
|.++.+-+|.+|+...+ ...++. .++.....-.+.||||.+|++..-. +..||.+.-+.....+.+-...
T Consensus 350 w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~--~~~iy~L~~~~~vk~~~v~~~~~~ 427 (691)
T KOG2048|consen 350 WKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTVS--RTKIYRLQPDPNVKVINVDDVPLA 427 (691)
T ss_pred eccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeecc--ceEEEEeccCcceeEEEeccchhh
Confidence 45677888999987222 222222 2344555566899999999987543 4567877766522122221111
Q ss_pred --cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE-EEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 77 --VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 77 --~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
......++-|+..+++.+.. ...|..++++++....- -+.+. .-..|..+..+.++-++++.. +...+++|
T Consensus 428 ~~~a~~i~ftid~~k~~~~s~~----~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~-t~g~I~v~ 502 (691)
T KOG2048|consen 428 LLDASAISFTIDKNKLFLVSKN----IFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS-TRGQIFVY 502 (691)
T ss_pred hccceeeEEEecCceEEEEecc----cceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe-ccceEEEE
Confidence 11223488899998888833 24677777665322221 11222 122456666666654554443 55678999
Q ss_pred EcCC
Q 010654 153 RLPA 156 (505)
Q Consensus 153 ~~~~ 156 (505)
++.+
T Consensus 503 nl~~ 506 (691)
T KOG2048|consen 503 NLET 506 (691)
T ss_pred Eccc
Confidence 8873
No 232
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.22 E-value=0.98 Score=41.59 Aligned_cols=179 Identities=15% Similarity=0.133 Sum_probs=93.8
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
...+++|++.+.. ....+... ........|+|++++|+.... ...++++|+.+++....+........ ..|++
T Consensus 30 ~g~i~i~~~~~~~--~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~---~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 103 (289)
T cd00200 30 DGTIKVWDLETGE--LLRTLKGH-TGPVRDVAASADGTYLASGSS---DKTIRLWDLETGECVRTLTGHTSYVSSVAFSP 103 (289)
T ss_pred CcEEEEEEeeCCC--cEEEEecC-CcceeEEEECCCCCEEEEEcC---CCeEEEEEcCcccceEEEeccCCcEEEEEEcC
Confidence 3467888886642 22222221 112237789999988766543 45688888887542344433322222 34888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCCCCCccccc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPAVGEPLKSL 164 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~~~~~~~~l 164 (505)
+++. ++....+ ..+..+++.. +.....+... ...+..+.+.++. +++....++ .+.+|++.. +....
T Consensus 104 ~~~~-~~~~~~~----~~i~~~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~--~i~i~d~~~-~~~~~-- 171 (289)
T cd00200 104 DGRI-LSSSSRD----KTIKVWDVET-GKCLTTLRGH-TDWVNSVAFSPDGTFVASSSQDG--TIKLWDLRT-GKCVA-- 171 (289)
T ss_pred CCCE-EEEecCC----CeEEEEECCC-cEEEEEeccC-CCcEEEEEEcCcCCEEEEEcCCC--cEEEEEccc-cccce--
Confidence 8654 4444322 3788888864 2222233322 2347788888864 444433344 477888753 22111
Q ss_pred CCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 165 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
.+. .....+..+.++++++.+++... -..+..++...++
T Consensus 172 ----~~~--~~~~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~ 210 (289)
T cd00200 172 ----TLT--GHTGEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGK 210 (289)
T ss_pred ----eEe--cCccccceEEECCCcCEEEEecC----CCcEEEEECCCCc
Confidence 111 11111233445666665554433 3567777776544
No 233
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.21 E-value=0.026 Score=54.09 Aligned_cols=88 Identities=22% Similarity=0.355 Sum_probs=62.7
Q ss_pred HCCcEEEEEcccCCCC---Cchh-HHHccc--ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 290 DRGFIFAIAQIRGGGE---LGRQ-WYENGK--FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 290 ~~G~~v~~~d~rG~~~---~g~~-~~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
+.+-.++.+..|-.|+ +|.. +..+.. ....++.+.|+...+.+|++........|.++|+||||.+++|.-.++
T Consensus 109 ~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY 188 (492)
T KOG2183|consen 109 ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY 188 (492)
T ss_pred hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC
Confidence 3578899999996653 3443 111100 112236789999999999887555567899999999999999999999
Q ss_pred CCceeEEE-ecCCch
Q 010654 364 PDLFKAAV-AAVPFV 377 (505)
Q Consensus 364 p~~~~a~v-~~~~~~ 377 (505)
|.+..++. +.+|+.
T Consensus 189 PHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 189 PHIVLGALAASAPVL 203 (492)
T ss_pred hhhhhhhhhccCceE
Confidence 99766554 556654
No 234
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.13 E-value=0.059 Score=51.33 Aligned_cols=130 Identities=13% Similarity=0.044 Sum_probs=80.0
Q ss_pred EEEEECCCCCCCCeEEEEecCCceE-EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc--cceeEEeeee
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYS-LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGVDTAASHR 86 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~-~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~s~d 86 (505)
+++||+.|+ +-...|... ..+. .+..|-|||..++..+. ...++..|+++.. ......-. .-.+..+++|
T Consensus 293 ~~lwDv~tg--d~~~~y~~~-~~~S~~sc~W~pDg~~~V~Gs~---dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~D 365 (519)
T KOG0293|consen 293 LSLWDVDTG--DLRHLYPSG-LGFSVSSCAWCPDGFRFVTGSP---DRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYD 365 (519)
T ss_pred eeeccCCcc--hhhhhcccC-cCCCcceeEEccCCceeEecCC---CCcEEEecCCcch-hhcccccccceeEEEEEcCC
Confidence 889999886 345566533 2344 47889999999654322 2558888888764 22221111 1123458999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|++++.+..+ .++..++.+.. ..+-+++. +..+..++.++|+.++..+-.. ..+.+|++.
T Consensus 366 gk~vl~v~~d-----~~i~l~~~e~~-~dr~lise--~~~its~~iS~d~k~~LvnL~~-qei~LWDl~ 425 (519)
T KOG0293|consen 366 GKYVLLVTVD-----KKIRLYNREAR-VDRGLISE--EQPITSFSISKDGKLALVNLQD-QEIHLWDLE 425 (519)
T ss_pred CcEEEEEecc-----cceeeechhhh-hhhccccc--cCceeEEEEcCCCcEEEEEccc-CeeEEeecc
Confidence 9999988854 36677777652 11113433 2357888999987666665433 347788876
No 235
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=96.10 E-value=0.58 Score=42.59 Aligned_cols=137 Identities=12% Similarity=0.024 Sum_probs=81.2
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-E-Ee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T-AA 83 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~-~~ 83 (505)
|...+.+|+.-+.. .-.+.++...+|..-+.|||.....++.+.+.+. -|-+.|+.+-+ ++.-.....+.. + .+
T Consensus 125 rDkTiklwnt~g~c--k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk-tvKvWnl~~~~-l~~~~~gh~~~v~t~~v 200 (315)
T KOG0279|consen 125 RDKTIKLWNTLGVC--KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK-TVKVWNLRNCQ-LRTTFIGHSGYVNTVTV 200 (315)
T ss_pred CcceeeeeeecccE--EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc-eEEEEccCCcc-hhhccccccccEEEEEE
Confidence 55668888874432 1122222225577778999986443343333322 35566777654 444333333332 2 39
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
||||..++. ++....+++.|++. ++. +-+-+....+.+++.++++..++...... +.++++..
T Consensus 201 SpDGslcas-----Ggkdg~~~LwdL~~-~k~--lysl~a~~~v~sl~fspnrywL~~at~~s--IkIwdl~~ 263 (315)
T KOG0279|consen 201 SPDGSLCAS-----GGKDGEAMLWDLNE-GKN--LYSLEAFDIVNSLCFSPNRYWLCAATATS--IKIWDLES 263 (315)
T ss_pred CCCCCEEec-----CCCCceEEEEEccC-Cce--eEeccCCCeEeeEEecCCceeEeeccCCc--eEEEeccc
Confidence 999987664 22336899999986 333 33333344578899999988877665432 77888764
No 236
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=96.09 E-value=0.49 Score=42.65 Aligned_cols=40 Identities=5% Similarity=0.133 Sum_probs=24.8
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecc
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 52 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~ 52 (505)
.+.+|+++++ +.+...+...+.+ ...|||||.++++..+.
T Consensus 88 ~ir~wd~r~~--k~~~~i~~~~eni--~i~wsp~g~~~~~~~kd 127 (313)
T KOG1407|consen 88 TIRIWDIRSG--KCTARIETKGENI--NITWSPDGEYIAVGNKD 127 (313)
T ss_pred eEEEEEeccC--cEEEEeeccCcce--EEEEcCCCCEEEEecCc
Confidence 4677888664 2333333333333 45799999999887543
No 237
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.09 E-value=0.058 Score=48.68 Aligned_cols=175 Identities=14% Similarity=0.050 Sum_probs=94.2
Q ss_pred EEEEEeCCccCCCCCCcEEEEEcCCCCcCCC--CCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHH
Q 010654 248 ICIVYRKNLVKLDGSDPLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 325 (505)
Q Consensus 248 ~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 325 (505)
.|+..|+. .-.||+.-||.-.... -.|......|+++||+|++.-|.-+= +.. .......+.
T Consensus 8 ~wvl~P~~-------P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf----DH~-----~~A~~~~~~ 71 (250)
T PF07082_consen 8 SWVLIPPR-------PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF----DHQ-----AIAREVWER 71 (250)
T ss_pred cEEEeCCC-------CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC----cHH-----HHHHHHHHH
Confidence 46666653 2477777787533323 33555667899999999998875321 111 111133455
Q ss_pred HHHHHHHHHHcCCCCCC--cEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhccCCCCCCCccc----ccccC
Q 010654 326 FIACAEYLIKNCYCTKE--KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE----WEEWG 399 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~--rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~----~~~~g 399 (505)
+..+++.|.+++..++. .+.=+|||+|+-+-+.+....+..-++-+.. .+-| +-.+..+|+.... ..++
T Consensus 72 f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gnili-SFNN---~~a~~aIP~~~~l~~~l~~EF- 146 (250)
T PF07082_consen 72 FERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILI-SFNN---FPADEAIPLLEQLAPALRLEF- 146 (250)
T ss_pred HHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEE-ecCC---hHHHhhCchHhhhccccccCc-
Confidence 66677777776544433 5666899999998887776543221221211 1111 1111233321110 1122
Q ss_pred CCCCHHHHHHHHhCChhhcccCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcC
Q 010654 400 DPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK 454 (505)
Q Consensus 400 ~~~~~~~~~~~~~~sp~~~~~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~ 454 (505)
.|.-.+....++... . .+..|+|-=.+|.. .|+..+.+.|+.+.
T Consensus 147 ~PsP~ET~~li~~~Y---~-----~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~ 190 (250)
T PF07082_consen 147 TPSPEETRRLIRESY---Q-----VRRNLLIKFNDDDI---DQTDELEQILQQRF 190 (250)
T ss_pred cCCHHHHHHHHHHhc---C-----CccceEEEecCCCc---cchHHHHHHHhhhc
Confidence 233333333333211 1 22467776777765 69999999998764
No 238
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=96.06 E-value=0.31 Score=44.98 Aligned_cols=97 Identities=7% Similarity=0.157 Sum_probs=56.4
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee-eecc-ccc---eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPR-VVG---VDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~-l~~~-~~~---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
...+|||||+|+++.+ .+.+|++|+=+|. ... +... ..+ ....++|||+.+.--+++ ++|+.++++
T Consensus 192 ~l~FS~dGK~iLlsT~---~s~~~~lDAf~G~-~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~d-----g~i~vw~~~ 262 (311)
T KOG1446|consen 192 DLEFSPDGKSILLSTN---ASFIYLLDAFDGT-VKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDD-----GTIHVWNLE 262 (311)
T ss_pred eeEEcCCCCEEEEEeC---CCcEEEEEccCCc-EeeeEeeccCCCCcceeEEECCCCcEEEEecCC-----CcEEEEEcC
Confidence 5678999999998754 4569999998886 322 2211 112 234599999865433322 488888887
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEEe
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYER 142 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~ 142 (505)
+ +..--.+.........-+.|.+....++..
T Consensus 263 t-g~~v~~~~~~~~~~~~~~~fnP~~~mf~sa 293 (311)
T KOG1446|consen 263 T-GKKVAVLRGPNGGPVSCVRFNPRYAMFVSA 293 (311)
T ss_pred C-CcEeeEecCCCCCCccccccCCceeeeeec
Confidence 6 322112222112234455567766555543
No 239
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.04 E-value=0.014 Score=36.33 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=17.7
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
..|||||++|+|.++..+....+||+
T Consensus 14 p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 14 PAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred EEEecCCCEEEEEecCCCCCCcCEEC
Confidence 34999999999999885223456663
No 240
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.92 E-value=0.82 Score=42.42 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=67.2
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.++++|+||+.+++.........||.....+.. ..+.....-....|+++| +++...+. ....++++-+..+ ..
T Consensus 27 ~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~--~~~~~g~~l~~PS~d~~g-~~W~v~~~--~~~~~~~~~~~~g-~~ 100 (253)
T PF10647_consen 27 TSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV--RPVLTGGSLTRPSWDPDG-WVWTVDDG--SGGVRVVRDSASG-TG 100 (253)
T ss_pred cceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc--eeeccCCccccccccCCC-CEEEEEcC--CCceEEEEecCCC-cc
Confidence 478999999999988855567889999876653 333222211223499995 45555432 2223444422222 11
Q ss_pred ceEEEcCCCCc-eeeEEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 115 TTVLIPHRESV-KLQDIQLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 115 ~~~~~~~~~~~-~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
....+...... .|..+.+++| ++.++...++..++++-.+.
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 11122222111 6888888887 67787776666777776554
No 241
>PTZ00420 coronin; Provisional
Probab=95.91 E-value=2.6 Score=43.83 Aligned_cols=139 Identities=9% Similarity=0.041 Sum_probs=71.6
Q ss_pred ceEEEEECCCCCC------CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-e
Q 010654 8 DKAWLHKLEADQS------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-D 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~------~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~ 80 (505)
..|.+|++.++.. +....+.. .......+.|+|++..++++... ...|.+.|+.++.....+.. .... .
T Consensus 97 gtIrIWDi~t~~~~~~~i~~p~~~L~g-H~~~V~sVaf~P~g~~iLaSgS~--DgtIrIWDl~tg~~~~~i~~-~~~V~S 172 (568)
T PTZ00420 97 LTIRVWEIPHNDESVKEIKDPQCILKG-HKKKISIIDWNPMNYYIMCSSGF--DSFVNIWDIENEKRAFQINM-PKKLSS 172 (568)
T ss_pred CeEEEEECCCCCccccccccceEEeec-CCCcEEEEEECCCCCeEEEEEeC--CCeEEEEECCCCcEEEEEec-CCcEEE
Confidence 4578889865321 01112222 12234467899999987665443 34577888888752222322 2222 2
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe----CC-EEEEEEecCC--eeEEEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF----ID-HLAVYEREGG--LQKITTYR 153 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~d-~l~~~~~~~~--~~~l~~~~ 153 (505)
..|+|||+.|+..+.+ ..|.++|+.+ +.....+............|. ++ ..+++...++ ..++.+|+
T Consensus 173 lswspdG~lLat~s~D-----~~IrIwD~Rs-g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWD 246 (568)
T PTZ00420 173 LKWNIKGNLLSGTCVG-----KHMHIIDPRK-QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWD 246 (568)
T ss_pred EEECCCCCEEEEEecC-----CEEEEEECCC-CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEE
Confidence 3499999977544322 3688888875 322112222222111122222 33 3444433332 23688999
Q ss_pred cCC
Q 010654 154 LPA 156 (505)
Q Consensus 154 ~~~ 156 (505)
+..
T Consensus 247 lr~ 249 (568)
T PTZ00420 247 LKN 249 (568)
T ss_pred CCC
Confidence 863
No 242
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.84 E-value=0.069 Score=54.30 Aligned_cols=131 Identities=19% Similarity=0.188 Sum_probs=84.3
Q ss_pred eeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCc-hhHHHHHHCCcEEEEEcccCCCCCc----hhHHH--ccccc
Q 010654 245 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELG----RQWYE--NGKFL 317 (505)
Q Consensus 245 ~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~g----~~~~~--~~~~~ 317 (505)
.|...+.+|.+. ++ ..+...-||........-. .....-+++||+++.-|- |+.+.. ..|.. .....
T Consensus 16 ~i~fev~LP~~W---Ng--R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW---NG--RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh---cc--CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 677777788765 12 3333333443332221110 002345688999999994 333221 12210 01123
Q ss_pred CCcchHHHHHHHHHHHHHcCC-CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhh
Q 010654 318 KKKNTFTDFIACAEYLIKNCY-CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 381 (505)
Q Consensus 318 ~~~~~~~D~~~~~~~l~~~~~-~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~ 381 (505)
++...+.+...+.+.|++.-+ ..|++-...|.|-||--++.+|.++|+.|.++++.+|..++..
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTH 154 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHH
Confidence 444667777777788887633 4678999999999999999999999999999999999888654
No 243
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.80 E-value=0.023 Score=51.37 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=42.5
Q ss_pred ccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC----CceeEEEec
Q 010654 300 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP----DLFKAAVAA 373 (505)
Q Consensus 300 ~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p----~~~~a~v~~ 373 (505)
+||+......|.+....... ........|++|+.+.-.-.++.|.+.|||-||.+|..++...+ +++..+.+.
T Consensus 43 FRGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~f 119 (224)
T PF11187_consen 43 FRGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSF 119 (224)
T ss_pred EECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEe
Confidence 46664444555543222211 12233356667765542223456999999999999999988733 355555544
No 244
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.67 E-value=1 Score=42.99 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=81.2
Q ss_pred EEEEeCCCcEEEEEec-----cc---cceEEEEEeCCCCCceeeeecccc-ceeEEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 36 GLQASESKKFLFIASE-----SK---ITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~-----~~---~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
+....|||++.+=... .. ....||++|..++. .+++..... .+-..|||||+.+|+.-+. ..+|++
T Consensus 115 D~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~-~~l~~~~~~~~NGla~SpDg~tly~aDT~----~~~i~r 189 (307)
T COG3386 115 DGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGV-VRLLDDDLTIPNGLAFSPDGKTLYVADTP----ANRIHR 189 (307)
T ss_pred ceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCE-EEeecCcEEecCceEECCCCCEEEEEeCC----CCeEEE
Confidence 4577899986433333 11 23479999986553 455443221 1124599999998888654 258988
Q ss_pred eeCCC-C----CCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecC
Q 010654 107 CPVDN-T----SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 181 (505)
Q Consensus 107 ~~~~~-~----~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 181 (505)
++++. . +....+..........+++.+.++.+++....+-..+.+++.+ |..+ ..+.+|... ...
T Consensus 190 ~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd--G~l~------~~i~lP~~~--~t~ 259 (307)
T COG3386 190 YDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD--GKLL------GEIKLPVKR--PTN 259 (307)
T ss_pred EecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC--CcEE------EEEECCCCC--Ccc
Confidence 88762 1 1111233322333456777777765554333333467777654 5433 234454211 111
Q ss_pred CC-CcccCCEEEEEEecCCCC
Q 010654 182 SE-SVFSSRILRFHYSSLRTP 201 (505)
Q Consensus 182 ~~-~~~~~~~~~~~~~~~~~p 201 (505)
.. ..++.+.++++......+
T Consensus 260 ~~FgG~~~~~L~iTs~~~~~~ 280 (307)
T COG3386 260 PAFGGPDLNTLYITSARSGMS 280 (307)
T ss_pred ceEeCCCcCEEEEEecCCCCC
Confidence 11 123457777777666555
No 245
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.61 E-value=0.024 Score=44.37 Aligned_cols=42 Identities=33% Similarity=0.517 Sum_probs=35.5
Q ss_pred CeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 425 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 425 Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
+|+|++.++.|+.+|+..++++.+.|.. .+++..+ +.||+..
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~---g~gHg~~ 76 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVD---GAGHGVY 76 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEe---ccCccee
Confidence 3599999999999999999999998875 3678888 7799754
No 246
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.61 E-value=0.048 Score=54.64 Aligned_cols=131 Identities=13% Similarity=0.101 Sum_probs=72.1
Q ss_pred CceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCC-------Cc--------------hhHHHHHHCCcEEEEEccc
Q 010654 243 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-------FN--------------SSRLSLLDRGFIFAIAQIR 301 (505)
Q Consensus 243 G~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~-------~~--------------~~~~~l~~~G~~v~~~d~r 301 (505)
+..+..|++. ... .....|+|+++-||||.+...+ +. .....|.+. ..++.+|.+
T Consensus 49 ~~~lfy~f~e-s~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqP 124 (433)
T PLN03016 49 NVQFFYYFIK-SEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQP 124 (433)
T ss_pred CeEEEEEEEe-cCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCC
Confidence 4556555443 322 2356799999999998543110 00 011234444 567888865
Q ss_pred CCCCCchhHHHcccccCCc-chHHHHHHHHH-HHHHcCCCCCCcEEEEeeChHHHHHHHHHhh----C------CCceeE
Q 010654 302 GGGELGRQWYENGKFLKKK-NTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R------PDLFKA 369 (505)
Q Consensus 302 G~~~~g~~~~~~~~~~~~~-~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~------p~~~~a 369 (505)
-+.||... ......... ...+|+..++. |+...+..-...+.|+|.||||..+-.++.. . +=-+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 54444321 111111111 23356666665 3444444445679999999999855444332 1 114788
Q ss_pred EEecCCchhh
Q 010654 370 AVAAVPFVDV 379 (505)
Q Consensus 370 ~v~~~~~~d~ 379 (505)
++...|.++.
T Consensus 203 i~iGNg~t~~ 212 (433)
T PLN03016 203 YMLGNPVTYM 212 (433)
T ss_pred eEecCCCcCc
Confidence 8888887764
No 247
>PLN02209 serine carboxypeptidase
Probab=95.59 E-value=0.055 Score=54.26 Aligned_cols=133 Identities=14% Similarity=0.151 Sum_probs=72.9
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCC---------c------------hhHHHHHHCCcEEEEEcc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF---------N------------SSRLSLLDRGFIFAIAQI 300 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~---------~------------~~~~~l~~~G~~v~~~d~ 300 (505)
.|..+..+++ .... .....|+|+++-||||.+...+. . .....|.+. ..++.+|.
T Consensus 50 ~~~~lf~~f~-es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDq 125 (437)
T PLN02209 50 ENVQFFYYFI-KSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQ 125 (437)
T ss_pred CCeEEEEEEE-ecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecC
Confidence 3555655544 3332 23457999999999986432111 0 011134444 46788886
Q ss_pred cCCCCCchhHHHcccccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHHhh----C------CCceeE
Q 010654 301 RGGGELGRQWYENGKFLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNM----R------PDLFKA 369 (505)
Q Consensus 301 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~------p~~~~a 369 (505)
+-+.||...-.... ...-..+.+|+..++.. +...+......+.|+|.||||..+-.++.. . +=-+++
T Consensus 126 PvGtGfSy~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~G 204 (437)
T PLN02209 126 PVGSGFSYSKTPIE-RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQG 204 (437)
T ss_pred CCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeee
Confidence 65555532111001 11111345666666654 334444444679999999999854444321 1 114678
Q ss_pred EEecCCchhh
Q 010654 370 AVAAVPFVDV 379 (505)
Q Consensus 370 ~v~~~~~~d~ 379 (505)
++...|.+|.
T Consensus 205 i~igng~td~ 214 (437)
T PLN02209 205 YVLGNPITHI 214 (437)
T ss_pred EEecCcccCh
Confidence 8888887764
No 248
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=95.58 E-value=0.29 Score=46.38 Aligned_cols=133 Identities=10% Similarity=-0.001 Sum_probs=76.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecccccee-EEe--
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAA-- 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~-- 83 (505)
..+-+||+-|. .......+ ...|...++|||||+.|+-. .-.+.|-+.|.++|+ .-+.|..+...+. ..|
T Consensus 137 ~TvR~WD~~Te--Tp~~t~Kg-H~~WVlcvawsPDgk~iASG---~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep 210 (480)
T KOG0271|consen 137 TTVRLWDLDTE--TPLFTCKG-HKNWVLCVAWSPDGKKIASG---SKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEP 210 (480)
T ss_pred ceEEeeccCCC--CcceeecC-CccEEEEEEECCCcchhhcc---ccCCeEEEecCCCCCcccccccCcccceeEEeecc
Confidence 34677888663 22222322 34588889999999998632 235678889988886 3344544443332 223
Q ss_pred ---eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 84 ---SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 84 ---s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.|..+.|+= +..+ ..+...|+.. +.....+.... ..+..+.|-++++++...++.. +.+|+..
T Consensus 211 ~hl~p~~r~las-~skD----g~vrIWd~~~-~~~~~~lsgHT-~~VTCvrwGG~gliySgS~Drt--Ikvw~a~ 276 (480)
T KOG0271|consen 211 LHLVPPCRRLAS-SSKD----GSVRIWDTKL-GTCVRTLSGHT-ASVTCVRWGGEGLIYSGSQDRT--IKVWRAL 276 (480)
T ss_pred cccCCCccceec-ccCC----CCEEEEEccC-ceEEEEeccCc-cceEEEEEcCCceEEecCCCce--EEEEEcc
Confidence 445553332 2222 2344445543 22222333332 3578899999999999888865 5567653
No 249
>PTZ00421 coronin; Provisional
Probab=95.58 E-value=1 Score=46.19 Aligned_cols=140 Identities=10% Similarity=0.018 Sum_probs=73.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~ 85 (505)
..|.+||+.+++ ....+.. .......++|+|||+.|+.... ...|.++|+.++.....+...... ....|.+
T Consensus 148 gtVrIWDl~tg~--~~~~l~~-h~~~V~sla~spdG~lLatgs~---Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 148 MVVNVWDVERGK--AVEVIKC-HSDQITSLEWNLDGSLLCTTSK---DKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred CEEEEEECCCCe--EEEEEcC-CCCceEEEEEECCCCEEEEecC---CCEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence 468899997752 3333332 2334557899999998764433 345888898887623333333222 1234888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
++..++-.... ......+.+.|+............+....+....++.+. ++++... +...+.+|++.
T Consensus 222 ~~~~ivt~G~s-~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggk-gDg~Iriwdl~ 290 (493)
T PTZ00421 222 RKDLIITLGCS-KSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSK-GEGNIRCFELM 290 (493)
T ss_pred CCCeEEEEecC-CCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEe-CCCeEEEEEee
Confidence 88776544432 122347888888653222112222222223334455543 3333332 22357778875
No 250
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.20 E-value=0.081 Score=50.22 Aligned_cols=112 Identities=18% Similarity=0.241 Sum_probs=64.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc--EEEEEcccCCCC-CchhHHHcccccCCcchHHHHHHHHHHHHHcC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGE-LGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 337 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~-~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 337 (505)
...-++|++||-...-... -....|...+.|+ +.+..-.+..|. +|..+ .++.-.....++...+++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf~da-v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~----DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY----DRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhHH-HHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc----chhhhhhhHHHHHHHHHHHHhCC
Confidence 3457999999864332111 1122344444454 223333332221 11111 12223356788889999999876
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHhhC--------CCceeEEEecCCchhh
Q 010654 338 YCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDV 379 (505)
Q Consensus 338 ~~d~~rv~i~G~S~GG~~~~~~~~~~--------p~~~~a~v~~~~~~d~ 379 (505)
.+ ++|.|++||||.++++.++.+- +..|+-+|..+|=.|.
T Consensus 189 ~~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 PV--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred CC--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 53 6899999999999988876541 2245666777775553
No 251
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.10 E-value=0.12 Score=51.49 Aligned_cols=137 Identities=16% Similarity=0.089 Sum_probs=78.0
Q ss_pred ECCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhH----------------HHHHHCCcEEEEEcccC
Q 010654 239 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR----------------LSLLDRGFIFAIAQIRG 302 (505)
Q Consensus 239 ~s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~----------------~~l~~~G~~v~~~d~rG 302 (505)
....|..+..|++.-.. .....|+||++-||||.+...+...+. -.|.+. -.++..|-+-
T Consensus 52 ~~~~~~~LFYwf~eS~~---~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfLd~Pv 127 (454)
T KOG1282|consen 52 NESEGRQLFYWFFESEN---NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKE-ANILFLDQPV 127 (454)
T ss_pred CCCCCceEEEEEEEccC---CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccccc-ccEEEEecCC
Confidence 33467788877554432 234579999999999865322211110 123333 2456666654
Q ss_pred CCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCCCCcEEEEeeChHHHHHHHHH----hhC-----C-CceeEEE
Q 010654 303 GGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCTKEKLCIEGRSAGGLLIGAVL----NMR-----P-DLFKAAV 371 (505)
Q Consensus 303 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~----~~~-----p-~~~~a~v 371 (505)
+.||.-.-........-....+|...++ +|+.+.+.--.+...|.|.||+|..+-.+| ..+ | --+++.+
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 4444221111111112223456666555 577777766667899999999997544443 222 1 1478999
Q ss_pred ecCCchhh
Q 010654 372 AAVPFVDV 379 (505)
Q Consensus 372 ~~~~~~d~ 379 (505)
...|++|.
T Consensus 208 IGNg~td~ 215 (454)
T KOG1282|consen 208 IGNGLTDP 215 (454)
T ss_pred ecCcccCc
Confidence 99998774
No 252
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.04 E-value=0.1 Score=49.44 Aligned_cols=117 Identities=17% Similarity=0.128 Sum_probs=73.1
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHC---------CcEEEEEcccCCCCCchhHHH
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR---------GFIFAIAQIRGGGELGRQWYE 312 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~---------G~~v~~~d~rG~~~~g~~~~~ 312 (505)
.|.+|+-.-..|+.. +..++.-.++++||.||+-.. |...+..|.+- -|-|++|-.+|.|-+ +
T Consensus 132 eGL~iHFlhvk~p~~-k~~k~v~PlLl~HGwPGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS-----d 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQK-KKKKKVKPLLLLHGWPGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS-----D 203 (469)
T ss_pred cceeEEEEEecCCcc-ccCCcccceEEecCCCchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcccC-----c
Confidence 678888766667765 444555556778999987432 22233333332 367899988876532 2
Q ss_pred cccccCCcchHHHHHHHHHH-HHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEE
Q 010654 313 NGKFLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 371 (505)
Q Consensus 313 ~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v 371 (505)
+. ...|-+. ..+..+++- +...|+ ++..|-|+-+|..++..++..+|+.+.+.-
T Consensus 204 ~~-sk~GFn~-~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 204 AP-SKTGFNA-AATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred CC-ccCCccH-HHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 11 1222222 223333333 344465 789999999999999999999999776543
No 253
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=94.92 E-value=0.6 Score=45.43 Aligned_cols=107 Identities=10% Similarity=0.182 Sum_probs=69.4
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc---c-ccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR---V-VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~---~-~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..++|+|+..++++.. +.-+|.+|+.+.+ +..+.+. + .... +.+|||++.|++..+. ++|+++...+
T Consensus 263 a~f~p~G~~~i~~s~r--rky~ysyDle~ak-~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~-----G~I~lLhakT 334 (514)
T KOG2055|consen 263 AEFAPNGHSVIFTSGR--RKYLYSYDLETAK-VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN-----GHIHLLHAKT 334 (514)
T ss_pred eeecCCCceEEEeccc--ceEEEEeeccccc-cccccCCCCcccchhheeEecCCCCeEEEcccC-----ceEEeehhhh
Confidence 5689999976665443 4568999999887 5444322 1 1222 4499999988877654 4788887654
Q ss_pred CCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 010654 112 TSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~~ 156 (505)
..|+-+-.....+.++.|+-|+ .+++.... .+++++++..
T Consensus 335 ---~eli~s~KieG~v~~~~fsSdsk~l~~~~~~--GeV~v~nl~~ 375 (514)
T KOG2055|consen 335 ---KELITSFKIEGVVSDFTFSSDSKELLASGGT--GEVYVWNLRQ 375 (514)
T ss_pred ---hhhhheeeeccEEeeEEEecCCcEEEEEcCC--ceEEEEecCC
Confidence 2333333345568888998774 44444333 4789999864
No 254
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=94.73 E-value=1.2 Score=41.06 Aligned_cols=127 Identities=14% Similarity=0.096 Sum_probs=71.2
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
...+.+|++.+.. ....+.. .......+.|+|||+.+++... ...+.++|+.++.....+........ ..|+|
T Consensus 156 ~~~i~i~d~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 229 (289)
T cd00200 156 DGTIKLWDLRTGK--CVATLTG-HTGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLSTGKCLGTLRGHENGVNSVAFSP 229 (289)
T ss_pred CCcEEEEEccccc--cceeEec-CccccceEEECCCcCEEEEecC---CCcEEEEECCCCceecchhhcCCceEEEEEcC
Confidence 3468888886542 2333332 2223446789999988877654 45688889887652233322222222 34888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCe
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGL 146 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~ 146 (505)
++. +++....+ ..++.+++.. +.....+... ...+..+.|+++ ..+++...++.
T Consensus 230 ~~~-~~~~~~~~----~~i~i~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~ 284 (289)
T cd00200 230 DGY-LLASGSED----GTIRVWDLRT-GECVQTLSGH-TNSVTSLAWSPDGKRLASGSADGT 284 (289)
T ss_pred CCc-EEEEEcCC----CcEEEEEcCC-ceeEEEcccc-CCcEEEEEECCCCCEEEEecCCCe
Confidence 854 44444322 3788888765 2222233322 335778888886 45555555553
No 255
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.58 E-value=7 Score=40.92 Aligned_cols=175 Identities=11% Similarity=0.105 Sum_probs=87.4
Q ss_pred eEEEEECCCCCCCCeEEEEecCCce-EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~-~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
+|.+|+..+. ..|++...... ....+.||||++|+-. .+...|-++|..+|-=...++.+..+.. ..|+..
T Consensus 331 QLlVweWqsE----sYVlKQQgH~~~i~~l~YSpDgq~iaTG---~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~ 403 (893)
T KOG0291|consen 331 QLLVWEWQSE----SYVLKQQGHSDRITSLAYSPDGQLIATG---AEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR 403 (893)
T ss_pred eEEEEEeecc----ceeeeccccccceeeEEECCCCcEEEec---cCCCcEEEEeccCceEEEEeccCCCceEEEEEEec
Confidence 4566665442 34554321111 2256899999987532 2234566667666521222333433433 348877
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQG 166 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 166 (505)
|+.+ +.+..+| .+-..|+.....-+ .++.......+.++.++.+.++++-......+++|++.+ |..+.-|.
T Consensus 404 g~~l-lssSLDG----tVRAwDlkRYrNfR-Tft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT-GqllDiLs- 475 (893)
T KOG0291|consen 404 GNVL-LSSSLDG----TVRAWDLKRYRNFR-TFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT-GQLLDILS- 475 (893)
T ss_pred CCEE-EEeecCC----eEEeeeecccceee-eecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec-Ceeeehhc-
Confidence 7654 4444433 44455654311222 334333444666777766655555444456789999875 33222222
Q ss_pred CceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEE
Q 010654 167 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDY 207 (505)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 207 (505)
|++ ..+.+++++++++. +...|...--.+|.+
T Consensus 476 GHE-------gPVs~l~f~~~~~~--LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 476 GHE-------GPVSGLSFSPDGSL--LASGSWDKTVRIWDI 507 (893)
T ss_pred CCC-------CcceeeEEccccCe--EEeccccceEEEEEe
Confidence 221 12344456677662 233444444455544
No 256
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=94.53 E-value=0.36 Score=44.93 Aligned_cols=107 Identities=13% Similarity=0.035 Sum_probs=66.4
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
..+||+|++|+.... .+|.+-|..+-+ +.++....+.+.| .|+.|..++.-.-..+ ..+.+.++.. +
T Consensus 14 c~fSp~g~yiAs~~~----yrlviRd~~tlq-~~qlf~cldki~yieW~ads~~ilC~~yk~----~~vqvwsl~Q---p 81 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSR----YRLVIRDSETLQ-LHQLFLCLDKIVYIEWKADSCHILCVAYKD----PKVQVWSLVQ---P 81 (447)
T ss_pred eeECCCCCeeeeeee----eEEEEeccchhh-HHHHHHHHHHhhheeeeccceeeeeeeecc----ceEEEEEeec---c
Confidence 468999999875533 367777777764 5555444444444 4888877655444332 3666777754 5
Q ss_pred eE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 116 TV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 116 ~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+| -+.++.+ .++.++|++|+.-+..+..=..++.++++.+
T Consensus 82 ew~ckIdeg~a-gls~~~WSPdgrhiL~tseF~lriTVWSL~t 123 (447)
T KOG4497|consen 82 EWYCKIDEGQA-GLSSISWSPDGRHILLTSEFDLRITVWSLNT 123 (447)
T ss_pred eeEEEeccCCC-cceeeeECCCcceEeeeecceeEEEEEEecc
Confidence 56 3444444 4789999998644333333335677888764
No 257
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=94.51 E-value=0.8 Score=44.43 Aligned_cols=113 Identities=12% Similarity=0.161 Sum_probs=63.9
Q ss_pred EEEeC-CCcEEEEEeccccceEEEEEeCCCCC-----ceeeeecc-------ccce-eEEeeeeCCEEEEEEcCCC----
Q 010654 37 LQASE-SKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPR-------VVGV-DTAASHRGNHFFITRRSDE---- 98 (505)
Q Consensus 37 ~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~-----~~~~l~~~-------~~~~-~~~~s~dg~~l~~~~~~~~---- 98 (505)
+..++ ||++++++.. ..|+.+|+++.. .+..++.. ..|. ...+++||+++|++.....
T Consensus 199 P~~~~~dg~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~th 274 (352)
T TIGR02658 199 PAYSNKSGRLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTH 274 (352)
T ss_pred CceEcCCCcEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccc
Confidence 33456 8988766544 679999976654 12222211 1121 1348999999999653211
Q ss_pred -CCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEE-EEEEecCCeeEEEEEEcCC
Q 010654 99 -LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 99 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l-~~~~~~~~~~~l~~~~~~~ 156 (505)
.+..++.++|.++..... .+.-. ..+..+..++|+. .++........+.++|+.+
T Consensus 275 k~~~~~V~ViD~~t~kvi~-~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t 331 (352)
T TIGR02658 275 KTASRFLFVVDAKTGKRLR-KIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAET 331 (352)
T ss_pred cCCCCEEEEEECCCCeEEE-EEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcC
Confidence 233589999987622222 22211 1356777888744 3333333345588888753
No 258
>PTZ00421 coronin; Provisional
Probab=94.36 E-value=7.1 Score=40.12 Aligned_cols=139 Identities=10% Similarity=0.019 Sum_probs=73.0
Q ss_pred ceEEEEECCCCCC-----CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-E
Q 010654 8 DKAWLHKLEADQS-----NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~-----~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~ 81 (505)
..|.+|++.+... +....+.+. ..-...+.|+|++..++++... ...|.+.|+.++.....+........ .
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L~gH-~~~V~~l~f~P~~~~iLaSgs~--DgtVrIWDl~tg~~~~~l~~h~~~V~sl 174 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHLQGH-TKKVGIVSFHPSAMNVLASAGA--DMVVNVWDVERGKAVEVIKCHSDQITSL 174 (493)
T ss_pred CEEEEEecCCCccccccCcceEEecCC-CCcEEEEEeCcCCCCEEEEEeC--CCEEEEEECCCCeEEEEEcCCCCceEEE
Confidence 4578888865321 112233322 2233467899998655554432 34578889888752333333332322 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEe--cCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYER--EGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~--~~~~~~l~~~~~~ 155 (505)
.|+|||+.|+..+.+ ..|.++|+.. +.....+............|.++ ..+++.. .....++.+|++.
T Consensus 175 a~spdG~lLatgs~D-----g~IrIwD~rs-g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr 245 (493)
T PTZ00421 175 EWNLDGSLLCTTSKD-----KKLNIIDPRD-GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR 245 (493)
T ss_pred EEECCCCEEEEecCC-----CEEEEEECCC-CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC
Confidence 499999876654432 3778888865 33221222222222334556654 3333322 2223468889875
No 259
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=94.32 E-value=0.36 Score=48.75 Aligned_cols=98 Identities=8% Similarity=-0.006 Sum_probs=57.9
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-----cce
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-----VGV 79 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-----~~~ 79 (505)
.....|-+|||.+....- .+... .+-..+++|||||++++-..... .|.+++..++. +.+..+. .|.
T Consensus 697 syd~Ti~lWDl~~~~~~~-~l~gH--tdqIf~~AWSpdGr~~AtVcKDg---~~rVy~Prs~e--~pv~Eg~gpvgtRgA 768 (1012)
T KOG1445|consen 697 SYDSTIELWDLANAKLYS-RLVGH--TDQIFGIAWSPDGRRIATVCKDG---TLRVYEPRSRE--QPVYEGKGPVGTRGA 768 (1012)
T ss_pred hccceeeeeehhhhhhhh-eeccC--cCceeEEEECCCCcceeeeecCc---eEEEeCCCCCC--CccccCCCCccCcce
Confidence 345678999998863222 22222 23455789999999987665542 46666666553 3333222 122
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..-|--||+.++...-+..+ ..+|-.|+...
T Consensus 769 Ri~wacdgr~viv~Gfdk~S-eRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 769 RILWACDGRIVIVVGFDKSS-ERQVQMYDAQT 799 (1012)
T ss_pred eEEEEecCcEEEEecccccc-hhhhhhhhhhh
Confidence 33488899888877765332 34666666543
No 260
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=94.21 E-value=1.2 Score=47.87 Aligned_cols=153 Identities=7% Similarity=-0.051 Sum_probs=80.9
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeC--------CCCC-----ceee---eeccc-cceeEEeeeeCCEEEEEEcCCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDV--------SKPE-----ELRV---LTPRV-VGVDTAASHRGNHFFITRRSDEL 99 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~--------~~~~-----~~~~---l~~~~-~~~~~~~s~dg~~l~~~~~~~~~ 99 (505)
++|||||++++..+.. .--.+|-..- ++|. .++. +..+. +-.+..||||+..++-.+.+
T Consensus 75 VR~S~dG~~lAsGSDD-~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~D--- 150 (942)
T KOG0973|consen 75 VRFSPDGSYLASGSDD-RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLD--- 150 (942)
T ss_pred EEECCCCCeEeeccCc-ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEeccc---
Confidence 5699999998754322 2334555551 1111 1222 22222 11234599999877766654
Q ss_pred CCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeee
Q 010654 100 FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179 (505)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (505)
..+.+++..++...+ ++... ...+.++.|++-+.||+...+.+. +.+|+... ..+.....+.--..+...+ +
T Consensus 151 --nsViiwn~~tF~~~~-vl~~H-~s~VKGvs~DP~Gky~ASqsdDrt-ikvwrt~d--w~i~k~It~pf~~~~~~T~-f 222 (942)
T KOG0973|consen 151 --NSVIIWNAKTFELLK-VLRGH-QSLVKGVSWDPIGKYFASQSDDRT-LKVWRTSD--WGIEKSITKPFEESPLTTF-F 222 (942)
T ss_pred --ceEEEEccccceeee-eeecc-cccccceEECCccCeeeeecCCce-EEEEEccc--ceeeEeeccchhhCCCcce-e
Confidence 367777876653333 22222 224678999998888888776654 66777442 2121111111000111111 2
Q ss_pred cCCCCcccCCEEEEEEecCCCCc
Q 010654 180 DPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
.-++|||||..+ .+.+..+.|.
T Consensus 223 ~RlSWSPDG~~l-as~nA~n~~~ 244 (942)
T KOG0973|consen 223 LRLSWSPDGHHL-ASPNAVNGGK 244 (942)
T ss_pred eecccCCCcCee-cchhhccCCc
Confidence 236899998854 4555555554
No 261
>PTZ00420 coronin; Provisional
Probab=94.21 E-value=4.1 Score=42.47 Aligned_cols=138 Identities=12% Similarity=-0.009 Sum_probs=71.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce--eE----
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DT---- 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~--~~---- 81 (505)
..|.+||+.+++ ....+. .+.-...++|+|||+.|+.... ...|.++|+.++.....+..+.... ..
T Consensus 148 gtIrIWDl~tg~--~~~~i~--~~~~V~SlswspdG~lLat~s~---D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~ 220 (568)
T PTZ00420 148 SFVNIWDIENEK--RAFQIN--MPKKLSSLKWNIKGNLLSGTCV---GKHMHIIDPRKQEIASSFHIHDGGKNTKNIWID 220 (568)
T ss_pred CeEEEEECCCCc--EEEEEe--cCCcEEEEEECCCCCEEEEEec---CCEEEEEECCCCcEEEEEecccCCceeEEEEee
Confidence 458889997753 222222 2223457889999998765432 3458888998876233333332211 11
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC-EEEE-EEecCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAV-YEREGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~-~~~~~~~~~l~~~~~~ 155 (505)
.|++|++.|+-.+..+ .....+.+.|+...+...-.+..+.....--..|+.+ +++| +...+ ..+++|++.
T Consensus 221 ~fs~d~~~IlTtG~d~-~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD--~tIr~~e~~ 293 (568)
T PTZ00420 221 GLGGDDNYILSTGFSK-NNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGD--GNCRYYQHS 293 (568)
T ss_pred eEcCCCCEEEEEEcCC-CCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECC--CeEEEEEcc
Confidence 1457887766555432 2224788889875333221222221111112334443 4444 44434 346778775
No 262
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.19 E-value=0.15 Score=46.94 Aligned_cols=85 Identities=18% Similarity=0.053 Sum_probs=49.2
Q ss_pred cEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCc
Q 010654 264 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 343 (505)
Q Consensus 264 P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 343 (505)
|.++++|++.|.. ..|......|... .-|+..+.+|.+.... ....++|..+..-..+.+- -....
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----------~~~~l~~~a~~yv~~Ir~~-QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----------PFASLDDMAAAYVAAIRRV-QPEGP 66 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCccccccc----------ccCCHHHHHHHHHHHHHHh-CCCCC
Confidence 5688899876532 2233333444444 7788888887664222 1234455544332222210 01136
Q ss_pred EEEEeeChHHHHHHHHHhh
Q 010654 344 LCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~ 362 (505)
+.+.|||+||.++.-+|.+
T Consensus 67 y~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred EEEEeeccccHHHHHHHHH
Confidence 8899999999998888765
No 263
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=94.15 E-value=0.062 Score=48.65 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=17.2
Q ss_pred CcEEEEeeChHHHHHHHHHh
Q 010654 342 EKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~ 361 (505)
.+|.++|||+||.++-.++.
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 58999999999998877665
No 264
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=94.14 E-value=3.1 Score=40.96 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=70.6
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-c----cee
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-V----GVD 80 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~----~~~ 80 (505)
|...|-++|+.+.+ .+-+-.-...-.+.+.|+||+++++... ..+.+-++|.++.+..+.+.... . ...
T Consensus 56 rdg~vsviD~~~~~----~v~~i~~G~~~~~i~~s~DG~~~~v~n~--~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~R 129 (369)
T PF02239_consen 56 RDGTVSVIDLATGK----VVATIKVGGNPRGIAVSPDGKYVYVANY--EPGTVSVIDAETLEPVKTIPTGGMPVDGPESR 129 (369)
T ss_dssp TTSEEEEEETTSSS----EEEEEE-SSEEEEEEE--TTTEEEEEEE--ETTEEEEEETTT--EEEEEE--EE-TTTS---
T ss_pred CCCeEEEEECCccc----EEEEEecCCCcceEEEcCCCCEEEEEec--CCCceeEeccccccceeecccccccccccCCC
Confidence 44567788887753 1211111223457889999999876532 24578889998876233332111 0 011
Q ss_pred ---EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 81 ---TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 81 ---~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
...+|.+..+++.-.+ ..+++.+|........ .-.......+.+..|++++.+|+...++...+.+++..
T Consensus 130 v~aIv~s~~~~~fVv~lkd----~~~I~vVdy~d~~~~~-~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~ 202 (369)
T PF02239_consen 130 VAAIVASPGRPEFVVNLKD----TGEIWVVDYSDPKNLK-VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK 202 (369)
T ss_dssp EEEEEE-SSSSEEEEEETT----TTEEEEEETTTSSCEE-EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred ceeEEecCCCCEEEEEEcc----CCeEEEEEeccccccc-eeeecccccccccccCcccceeeecccccceeEEEeec
Confidence 1246666665555433 2488888876532211 11111233467888888865555444445577777765
No 265
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.12 E-value=1.1 Score=44.46 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=75.6
Q ss_pred CCCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCchhHHHHHHCCc-EEEEEcccCCCCCchhHHHcccccC
Q 010654 240 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF-IFAIAQIRGGGELGRQWYENGKFLK 318 (505)
Q Consensus 240 s~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~-~v~~~d~rG~~~~g~~~~~~~~~~~ 318 (505)
...+..+-. .+.|-+. |.|+.|+.-|--. ..+|.. .-.|-..|. -.+.-|.|--||. |. .
T Consensus 272 D~~reEi~y-YFnPGD~-----KPPL~VYFSGyR~---aEGFEg-y~MMk~Lg~PfLL~~DpRleGGa---FY------l 332 (511)
T TIGR03712 272 DSKRQEFIY-YFNPGDF-----KPPLNVYFSGYRP---AEGFEG-YFMMKRLGAPFLLIGDPRLEGGA---FY------L 332 (511)
T ss_pred cCCCCeeEE-ecCCcCC-----CCCeEEeeccCcc---cCcchh-HHHHHhcCCCeEEeeccccccce---ee------e
Confidence 344666743 3666655 6799999976433 233432 234455566 5677889866642 21 1
Q ss_pred CcchH-HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhh
Q 010654 319 KKNTF-TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 382 (505)
Q Consensus 319 ~~~~~-~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~ 382 (505)
+...+ +-+...++...+.-..+.+.+.+.|-|||.+-|+.+++.- .-.|+|..=|++++-..
T Consensus 333 Gs~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~NLGti 395 (511)
T TIGR03712 333 GSDEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLVNLGTI 395 (511)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC--CCceEEEcCcccchhhh
Confidence 11111 2334444433333235778999999999999999998864 24889999999886443
No 266
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.08 E-value=0.18 Score=48.93 Aligned_cols=97 Identities=15% Similarity=0.087 Sum_probs=56.6
Q ss_pred EEEEEcCCCCcCCCCCCchhHHHHHHCCcE---EEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 265 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 265 ~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
.+|++||.... ...|......+...|+. +..+++.+....+. .....+-+.+-++.+......
T Consensus 61 pivlVhG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~ql~~~V~~~l~~~ga-- 126 (336)
T COG1075 61 PIVLVHGLGGG--YGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYS----------LAVRGEQLFAYVDEVLAKTGA-- 126 (336)
T ss_pred eEEEEccCcCC--cchhhhhhhhhcchHHHhcccccccccccCCCcc----------ccccHHHHHHHHHHHHhhcCC--
Confidence 67888996322 12233333345555666 66666664421111 112223333444444443322
Q ss_pred CcEEEEeeChHHHHHHHHHhhCC--CceeEEEecCC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRP--DLFKAAVAAVP 375 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p--~~~~a~v~~~~ 375 (505)
.++.+.|||+||..+..++...+ .+++..+...+
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 78999999999999999988877 67777776654
No 267
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=94.00 E-value=2.6 Score=40.41 Aligned_cols=53 Identities=8% Similarity=0.092 Sum_probs=38.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 67 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~ 67 (505)
..+.+|++||+. + +++-+.++...+..|+-||.+++-+... ..|.++|..+++
T Consensus 154 n~v~iWnv~tge--a--li~l~hpd~i~S~sfn~dGs~l~TtckD---KkvRv~dpr~~~ 206 (472)
T KOG0303|consen 154 NTVSIWNVGTGE--A--LITLDHPDMVYSMSFNRDGSLLCTTCKD---KKVRVIDPRRGT 206 (472)
T ss_pred ceEEEEeccCCc--e--eeecCCCCeEEEEEeccCCceeeeeccc---ceeEEEcCCCCc
Confidence 468999999973 2 2222367788889999999998755443 357778877765
No 268
>PF03283 PAE: Pectinacetylesterase
Probab=93.98 E-value=0.033 Score=54.30 Aligned_cols=37 Identities=24% Similarity=0.184 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHH
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
.-+.+++++|..+++-++++|.+.|.|+||+-++.-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4567889999999888899999999999999776644
No 269
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.94 E-value=2.4 Score=38.76 Aligned_cols=89 Identities=19% Similarity=0.203 Sum_probs=51.0
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHHcCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCT 340 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d 340 (505)
.|+ |..||-...+.+..+....+.+.+. |..|.+.+. |.| -...|. ....+....+ +.+...+..
T Consensus 24 ~P~-ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-~~~s~l---------~pl~~Qv~~~ce~v~~m~~l- 90 (296)
T KOG2541|consen 24 VPV-IVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-IKDSSL---------MPLWEQVDVACEKVKQMPEL- 90 (296)
T ss_pred CCE-EEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-cchhhh---------ccHHHHHHHHHHHHhcchhc-
Confidence 454 4559976555554455556677665 888888876 222 111111 1223333333 333333322
Q ss_pred CCcEEEEeeChHHHHHHHHHhhCC
Q 010654 341 KEKLCIEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 341 ~~rv~i~G~S~GG~~~~~~~~~~p 364 (505)
++-+-|+|.|.||..+-+++..-+
T Consensus 91 sqGynivg~SQGglv~Raliq~cd 114 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCD 114 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCC
Confidence 467889999999988877776544
No 270
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=93.76 E-value=1.1 Score=42.40 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=50.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEe-CCCCCceeeeecccccee-EEee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD-VSKPEELRVLTPRVVGVD-TAAS 84 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d-~~~~~~~~~l~~~~~~~~-~~~s 84 (505)
.+.+.+|+..+++. .++.... .+. +....|||||.+++...- .....||..+ .-+.+ ...+... -.. ..||
T Consensus 217 sssi~iWdpdtg~~-~pL~~~g-lgg-~slLkwSPdgd~lfaAt~-davfrlw~e~q~wt~e-rw~lgsg--rvqtacWs 289 (445)
T KOG2139|consen 217 SSSIMIWDPDTGQK-IPLIPKG-LGG-FSLLKWSPDGDVLFAATC-DAVFRLWQENQSWTKE-RWILGSG--RVQTACWS 289 (445)
T ss_pred cceEEEEcCCCCCc-ccccccC-CCc-eeeEEEcCCCCEEEEecc-cceeeeehhcccceec-ceeccCC--ceeeeeec
Confidence 35678888877654 3333222 122 335689999998765432 2344555322 22211 2222221 122 2399
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
|+|+.|.|..... ..||.+...
T Consensus 290 pcGsfLLf~~sgs----p~lysl~f~ 311 (445)
T KOG2139|consen 290 PCGSFLLFACSGS----PRLYSLTFD 311 (445)
T ss_pred CCCCEEEEEEcCC----ceEEEEeec
Confidence 9999999887531 366666543
No 271
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=93.66 E-value=0.32 Score=56.85 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 010654 263 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 342 (505)
Q Consensus 263 ~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 342 (505)
.|.++++||+.+... .|......| ..++.|+.++.+|.+.. ......++++.+.+...+..-.. ..
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~l~~~l-~~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~~-~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSVLSRYL-DPQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQP-HG 1133 (1296)
T ss_pred CCCeEEecCCCCchH--HHHHHHHhc-CCCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhCC-CC
Confidence 366888998776432 344333333 45799999999887532 11113444444433333322111 24
Q ss_pred cEEEEeeChHHHHHHHHHhh---CCCceeEEEecCC
Q 010654 343 KLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVP 375 (505)
Q Consensus 343 rv~i~G~S~GG~~~~~~~~~---~p~~~~a~v~~~~ 375 (505)
++.++|||+||.++..++.+ +++.....+...+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 78999999999999888874 4666666665443
No 272
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.55 E-value=1.9 Score=38.91 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=61.2
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCCCCch-hHHHHHH-CC--cEEEEEcccCCCCCchhHHHccccc
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RG--FIFAIAQIRGGGELGRQWYENGKFL 317 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~~~~~-~~~~l~~-~G--~~v~~~d~rG~~~~g~~~~~~~~~~ 317 (505)
.|..++...+.|--. ......|+|+++-|.||.. +|.. ....|.. .+ .-|..+-.-|+......-++.....
T Consensus 9 ~gl~~si~~~~~~v~-~~~~~~~li~~IpGNPG~~---gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 9 SGLPTSILTLKPWVT-KSGEDKPLIVWIPGNPGLL---GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT 84 (301)
T ss_pred cCCcccceeeeeeec-cCCCCceEEEEecCCCCch---hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc
Confidence 344444443444332 3446679999999888743 2332 2222222 22 2344443333332221111111111
Q ss_pred C-CcchHHHHHH-HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEecCC
Q 010654 318 K-KKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVP 375 (505)
Q Consensus 318 ~-~~~~~~D~~~-~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~~~ 375 (505)
. ..-..+|..+ -++++.+. .-...||.++|||-|+||++.++-.... .+..+++..|
T Consensus 85 ~~eifsL~~QV~HKlaFik~~-~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 85 NEEIFSLQDQVDHKLAFIKEY-VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred cccccchhhHHHHHHHHHHHh-CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 0 0112233322 23333332 2223689999999999999999873322 2344555555
No 273
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=93.55 E-value=3.3 Score=42.27 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=80.4
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
-.++++|++-.+ ..-..++. ....+.....++|+|+. +++... ...+.+.|+.+++..+.|..+.+++. ..+++
T Consensus 224 D~tiriwd~~~~-~~~~~~l~-gH~~~v~~~~f~p~g~~-i~Sgs~--D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 224 DKTLRIWDLKDD-GRNLKTLK-GHSTYVTSVAFSPDGNL-LVSGSD--DGTVRIWDVRTGECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred CceEEEeeccCC-CeEEEEec-CCCCceEEEEecCCCCE-EEEecC--CCcEEEEeccCCeEEEeeeccCCceEEEEECC
Confidence 356899998222 23444554 34556678899999954 444333 33477777777753455555554544 34899
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCce--EEEcCCCCc-eeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETT--VLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~-~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
||..|+-.+. + ..|.+.|+.+ +... -.+...... .+..+.++++..++..-... ..+.+|++.
T Consensus 299 d~~~l~s~s~-d----~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d-~~~~~w~l~ 364 (456)
T KOG0266|consen 299 DGNLLVSASY-D----GTIRVWDLET-GSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD-RTLKLWDLR 364 (456)
T ss_pred CCCEEEEcCC-C----ccEEEEECCC-CceeeeecccCCCCCCceeEEEECCCCcEEEEecCC-CeEEEEEcc
Confidence 9987765532 2 4788888876 3311 122222222 46777888886665544332 246677775
No 274
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=93.49 E-value=2.4 Score=39.51 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=40.4
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEE-eCCCCC--cee---eeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYL-DVSKPE--ELR---VLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~-d~~~~~--~~~---~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
-..+.|||||+|+...-..+.. +|-+ =-.+|. ++. .|..+..+.. +.||++.++++-.+.+ + ..+|+-.
T Consensus 232 ~~aavSP~GRFia~~gFTpDVk-VwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD-G--~wriwdt 307 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGFTPDVK-VWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD-G--KWRIWDT 307 (420)
T ss_pred cceeeCCCCcEEEEecCCCCce-EEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC-C--cEEEeec
Confidence 3578999999998775544322 3332 233343 222 2333333433 3489998887777654 3 2477655
Q ss_pred eC
Q 010654 108 PV 109 (505)
Q Consensus 108 ~~ 109 (505)
|+
T Consensus 308 dV 309 (420)
T KOG2096|consen 308 DV 309 (420)
T ss_pred cc
Confidence 54
No 275
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=93.49 E-value=9.1 Score=38.64 Aligned_cols=96 Identities=11% Similarity=0.075 Sum_probs=58.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEE--EEEEeCCCcEEEEEeccc----cceEEEEEeCCCCCceeeeeccccce
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSL--GLQASESKKFLFIASESK----ITRFVFYLDVSKPEELRVLTPRVVGV 79 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~--~~~~SpDg~~i~~~~~~~----~~~~l~~~d~~~~~~~~~l~~~~~~~ 79 (505)
-+++|.+||+.|+...+ -|...+..+.. -+.||-|+++++=...++ .....+++|..+-+ ..|+
T Consensus 280 e~~~l~IWDI~tG~lkr--sF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslk--------i~gI 349 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKR--SFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLK--------ISGI 349 (698)
T ss_pred CCceEEEEEccccchhc--ceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccC--------Cccc
Confidence 45789999999985433 34332222322 468999999987654432 22335555544322 1233
Q ss_pred -eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 80 -DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 80 -~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.++|||-+.-|+|.+.....-..++-++.+-.
T Consensus 350 r~FswsP~~~llAYwtpe~~~~parvtL~evPs 382 (698)
T KOG2314|consen 350 RDFSWSPTSNLLAYWTPETNNIPARVTLMEVPS 382 (698)
T ss_pred cCcccCCCcceEEEEcccccCCcceEEEEecCc
Confidence 36699999999998865433234666666644
No 276
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=93.47 E-value=4.9 Score=39.13 Aligned_cols=142 Identities=10% Similarity=0.091 Sum_probs=81.3
Q ss_pred ceEEEEECCCCCCC-----CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecc-cccee
Q 010654 8 DKAWLHKLEADQSN-----DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPR-VVGVD 80 (505)
Q Consensus 8 ~~l~~~~lgt~~~~-----~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~-~~~~~ 80 (505)
+.+.+||+.....+ .+.+|.. +.+-.-+++|++-...++.+.. +...|.+.|+.++. ++....+. .....
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~-h~~~VeDV~~h~~h~~lF~sv~--dd~~L~iwD~R~~~~~~~~~~~ah~~~vn 276 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSG-HEDVVEDVAWHPLHEDLFGSVG--DDGKLMIWDTRSNTSKPSHSVKAHSAEVN 276 (422)
T ss_pred CcEEEEeccccccCCccccceEEeec-CCcceehhhccccchhhheeec--CCCeEEEEEcCCCCCCCcccccccCCcee
Confidence 45778888544332 2334432 2333346778887777665443 35667888877532 13222222 22222
Q ss_pred -EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCC
Q 010654 81 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAV 157 (505)
Q Consensus 81 -~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~ 157 (505)
..|.|.+..|+-....+ ..|.+.|+......-..+....+ .+..+.|+++ .++.....++ ++.+|+++.-
T Consensus 277 ~~~fnp~~~~ilAT~S~D----~tV~LwDlRnL~~~lh~~e~H~d-ev~~V~WSPh~etvLASSg~D~--rl~vWDls~i 349 (422)
T KOG0264|consen 277 CVAFNPFNEFILATGSAD----KTVALWDLRNLNKPLHTFEGHED-EVFQVEWSPHNETVLASSGTDR--RLNVWDLSRI 349 (422)
T ss_pred EEEeCCCCCceEEeccCC----CcEEEeechhcccCceeccCCCc-ceEEEEeCCCCCceeEecccCC--cEEEEecccc
Confidence 23889888776665443 48999998764443324444445 4678999996 4554444444 5778888743
Q ss_pred CC
Q 010654 158 GE 159 (505)
Q Consensus 158 ~~ 159 (505)
|+
T Consensus 350 g~ 351 (422)
T KOG0264|consen 350 GE 351 (422)
T ss_pred cc
Confidence 33
No 277
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=93.47 E-value=3 Score=41.84 Aligned_cols=117 Identities=10% Similarity=0.087 Sum_probs=69.1
Q ss_pred EEEEeCCCcEEEEEecccc---------ceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 36 GLQASESKKFLFIASESKI---------TRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~---------~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
..-|-..|.+|++...++. +-+|+.++=..-. +..+--.+.-..+.|.|.|+++.+++......+-+.|.
T Consensus 398 kLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp-ve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~ 476 (698)
T KOG2314|consen 398 KLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP-VEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYA 476 (698)
T ss_pred EEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCC-ceeeecchheeeeeeccCCCeEEEEEccccccceeEEE
Confidence 3579999999999876532 3356666533321 22221111122355999999999998654444456676
Q ss_pred eeCCCCCCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcC
Q 010654 107 CPVDNTSETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~ 155 (505)
+.... ...+ ++..-.......+.|++.+ +++.........+..|+.+
T Consensus 477 ~e~~~-~~~~-lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 477 VETNI-KKPS-LVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred eecCC-Cchh-hhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence 66432 3333 4433333455678888864 4444444445678888876
No 278
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=93.38 E-value=0.25 Score=34.46 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=26.8
Q ss_pred CCceEEEEEEECCCCceeeEEEEEeCC-ccCCCCCCcEEEEEcCCCCcCC
Q 010654 229 NNYFTERKWASASDGTQIPICIVYRKN-LVKLDGSDPLLLYGYGSYEICN 277 (505)
Q Consensus 229 ~~~~~~~~~~~s~dG~~i~~~l~~p~~-~~~~~~~~P~iv~~hGg~~~~~ 277 (505)
..+..|...+.+.||.-+...-+.++. .....++.|+|++.||-..++.
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~ 57 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD 57 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH
Confidence 367889999999999988776554444 1124466899999999876544
No 279
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=93.34 E-value=0.58 Score=44.81 Aligned_cols=153 Identities=15% Similarity=0.112 Sum_probs=72.7
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+.|+|+||.|+..+.+. .-.|| +..+=.-..+++.++..+.. .||++|.++ +..+.++ -|...+..- ..
T Consensus 101 ~v~WtPeGRRLltgs~SG-EFtLW--Ng~~fnFEtilQaHDs~Vr~m~ws~~g~wm-iSgD~gG----~iKyWqpnm-nn 171 (464)
T KOG0284|consen 101 VVRWTPEGRRLLTGSQSG-EFTLW--NGTSFNFETILQAHDSPVRTMKWSHNGTWM-ISGDKGG----MIKYWQPNM-NN 171 (464)
T ss_pred eEEEcCCCceeEeecccc-cEEEe--cCceeeHHHHhhhhcccceeEEEccCCCEE-EEcCCCc----eEEecccch-hh
Confidence 468999999987655443 22233 22221101223333333333 399998753 3333322 222222211 00
Q ss_pred ceEEEcCCCCceeeEEEEeC-CEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEE
Q 010654 115 TTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 193 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~-d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (505)
.. .+-......|.+++.++ |..++.+.+++.-+++-+.... ++..+....+.+....+.|.-+ +++
T Consensus 172 Vk-~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k-----------ee~vL~GHgwdVksvdWHP~kg-Lia 238 (464)
T KOG0284|consen 172 VK-IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK-----------EERVLRGHGWDVKSVDWHPTKG-LIA 238 (464)
T ss_pred hH-HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc-----------hhheeccCCCCcceeccCCccc-eeE
Confidence 11 11111122355666654 6888888888765544332221 1122234445555566666544 556
Q ss_pred EEecCCCCceEEEEECCCCc
Q 010654 194 HYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~ 213 (505)
+.+..+ -+-+.|+++++
T Consensus 239 sgskDn---lVKlWDprSg~ 255 (464)
T KOG0284|consen 239 SGSKDN---LVKLWDPRSGS 255 (464)
T ss_pred EccCCc---eeEeecCCCcc
Confidence 665554 34445665543
No 280
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=93.31 E-value=0.71 Score=49.49 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=38.2
Q ss_pred eEEEEEeCCCCCceeee-eccccceeEE-eeeeCCEEEE-EEcCCCCCCceEEEeeCCCCC
Q 010654 56 RFVFYLDVSKPEELRVL-TPRVVGVDTA-ASHRGNHFFI-TRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l-~~~~~~~~~~-~s~dg~~l~~-~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.+|.++|.++.. .+.+ +.....+... |||||++|+| ++-.+-.....||+.+|.+.+
T Consensus 329 ~~L~~~D~dG~n-~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~ 388 (912)
T TIGR02171 329 GNLAYIDYTKGA-SRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASG 388 (912)
T ss_pred CeEEEEecCCCC-ceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccC
Confidence 389999999886 6766 4433223223 9999999999 544431124579998887533
No 281
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=93.06 E-value=0.91 Score=43.21 Aligned_cols=110 Identities=13% Similarity=0.032 Sum_probs=58.7
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
.+.+++||||++|+- .+...+-++|=++..++ ......+..-+. ..|||||++|+=- .-.+.|.+.|.+..
T Consensus 118 Vl~~~fsp~g~~l~t-GsGD~TvR~WD~~TeTp--~~t~KgH~~WVlcvawsPDgk~iASG-----~~dg~I~lwdpktg 189 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLVT-GSGDTTVRLWDLDTETP--LFTCKGHKNWVLCVAWSPDGKKIASG-----SKDGSIRLWDPKTG 189 (480)
T ss_pred EEEEEecCCCceEEe-cCCCceEEeeccCCCCc--ceeecCCccEEEEEEECCCcchhhcc-----ccCCeEEEecCCCC
Confidence 456789999998752 22223345555555444 333333333343 3499999987622 22347777886652
Q ss_pred CC-ceEEEcCCCCceeeEEEEeCC------EEEEEEecCCeeEEEEEEcC
Q 010654 113 SE-TTVLIPHRESVKLQDIQLFID------HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 113 ~~-~~~~~~~~~~~~i~~~~~~~d------~l~~~~~~~~~~~l~~~~~~ 155 (505)
+. .+ .+..... .|..++|-+- +++....++|. +.++++.
T Consensus 190 ~~~g~-~l~gH~K-~It~Lawep~hl~p~~r~las~skDg~--vrIWd~~ 235 (480)
T KOG0271|consen 190 QQIGR-ALRGHKK-WITALAWEPLHLVPPCRRLASSSKDGS--VRIWDTK 235 (480)
T ss_pred Ccccc-cccCccc-ceeEEeecccccCCCccceecccCCCC--EEEEEcc
Confidence 11 11 2333322 3666777652 34444445543 4567654
No 282
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=93.02 E-value=0.19 Score=49.85 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=53.2
Q ss_pred CCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHH
Q 010654 280 AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359 (505)
Q Consensus 280 ~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~ 359 (505)
.|....+.|.+.||..- .+.+ +.+-+|+.+.. ....-+..+...++.+.+.. ..+|.|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~-~~l~---~~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRG-KDLF---AAPYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccC-CEEE---EEeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 46667788888888531 1111 11124443222 12234456666666665543 4799999999999999998
Q ss_pred HhhCCC------ceeEEEecCC
Q 010654 360 LNMRPD------LFKAAVAAVP 375 (505)
Q Consensus 360 ~~~~p~------~~~a~v~~~~ 375 (505)
+...+. .++..|+.++
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCC
Confidence 877643 3566666554
No 283
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=92.93 E-value=3 Score=42.09 Aligned_cols=142 Identities=15% Similarity=0.083 Sum_probs=82.6
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEe
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAA 83 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~ 83 (505)
-|...+..+|+...+..-. .+.+ ..+-..+..|++||++++ +....+.+++.|..+......++.+...+ ...|
T Consensus 277 sr~~~I~~~dvR~~~~~~~-~~~~-H~qeVCgLkws~d~~~lA---SGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~aw 351 (484)
T KOG0305|consen 277 SRDGKILNHDVRISQHVVS-TLQG-HRQEVCGLKWSPDGNQLA---SGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAW 351 (484)
T ss_pred cCCCcEEEEEEecchhhhh-hhhc-ccceeeeeEECCCCCeec---cCCCccceEeccCCCccccEEEeccceeeeEeee
Confidence 4667788888877653222 2222 233456889999999875 33445677888875543233444443222 2348
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecC-CeeEEEEEEcCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREG-GLQKITTYRLPA 156 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~-~~~~l~~~~~~~ 156 (505)
+|.-..|.-... |.....|...+..+ +. . +-..+....|..+.|++..--++.+.+ ...++.+|+.++
T Consensus 352 cP~q~~lLAsGG--Gs~D~~i~fwn~~~-g~-~-i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps 420 (484)
T KOG0305|consen 352 CPWQSGLLATGG--GSADRCIKFWNTNT-GA-R-IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS 420 (484)
T ss_pred CCCccCceEEcC--CCcccEEEEEEcCC-Cc-E-ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc
Confidence 888776665542 33345777778764 32 2 222333446889999997633333322 334677887764
No 284
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.84 E-value=2 Score=40.47 Aligned_cols=74 Identities=14% Similarity=0.056 Sum_probs=48.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE----eeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA----ASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~----~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
++..+|+...+++...+. -..++++|..+++ ........++..++ ||+||++||-..++-......|-++|.+.
T Consensus 9 ~~a~~p~~~~avafaRRP-G~~~~v~D~~~g~-~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRP-GTFALVFDCRTGQ-LLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ceeeCCCCCeEEEEEeCC-CcEEEEEEcCCCc-eeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 456788555544433332 4568889999987 44333334454432 99999998888775444557899999873
No 285
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=92.81 E-value=0.17 Score=44.76 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=55.1
Q ss_pred cEEEEEcccCCCCCchh-HHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC----C---
Q 010654 293 FIFAIAQIRGGGELGRQ-WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR----P--- 364 (505)
Q Consensus 293 ~~v~~~d~rG~~~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~----p--- 364 (505)
..|+.|-||-..-+... -............+.|+.+|.++.+++-. +...+.|.|||.|+.+...++..+ |
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~ 124 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDPLRK 124 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCchHHh
Confidence 47899999866543221 01111112233678999999998777632 235799999999999999988664 1
Q ss_pred CceeEEEecCCchh
Q 010654 365 DLFKAAVAAVPFVD 378 (505)
Q Consensus 365 ~~~~a~v~~~~~~d 378 (505)
.++.|.+...+++.
T Consensus 125 rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 125 RLVAAYLIGYPVTV 138 (207)
T ss_pred hhheeeecCccccH
Confidence 24566666666654
No 286
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=92.65 E-value=0.34 Score=40.17 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
...+...++.+.++.. +.+|.+.|||.||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 4455566666655543 3789999999999988777654
No 287
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=92.65 E-value=7.5 Score=35.28 Aligned_cols=142 Identities=13% Similarity=0.044 Sum_probs=72.5
Q ss_pred eEEEEEeCCCCCceeeeec--cccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe
Q 010654 56 RFVFYLDVSKPEELRVLTP--RVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF 133 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 133 (505)
..|..+|+.+|+++....- ...+......++++.+++.+.. ..|+.+|..+ |+..|........ .......
T Consensus 3 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~l~~~d~~t-G~~~W~~~~~~~~-~~~~~~~ 75 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGD-----GNLYALDAKT-GKVLWRFDLPGPI-SGAPVVD 75 (238)
T ss_dssp SEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETT-----SEEEEEETTT-SEEEEEEECSSCG-GSGEEEE
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCC-----CEEEEEECCC-CCEEEEeeccccc-cceeeec
Confidence 3566677766652222111 1111111145688888888532 4899999877 7778855542221 1123556
Q ss_pred CCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 134 IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 134 ~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
++.+++.. .++ +++.++..+ |...-.. .....+... .........+++.+++... ...++.+++.+|+
T Consensus 76 ~~~v~v~~-~~~--~l~~~d~~t-G~~~W~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 76 GGRVYVGT-SDG--SLYALDAKT-GKVLWSI---YLTSSPPAG-VRSSSSPAVDGDRLYVGTS----SGKLVALDPKTGK 143 (238)
T ss_dssp TTEEEEEE-TTS--EEEEEETTT-SCEEEEE---EE-SSCTCS-TB--SEEEEETTEEEEEET----CSEEEEEETTTTE
T ss_pred cccccccc-cee--eeEecccCC-cceeeee---ccccccccc-cccccCceEecCEEEEEec----cCcEEEEecCCCc
Confidence 67776666 333 677777543 4321100 000000000 0111122334665655544 6789999999998
Q ss_pred EEE
Q 010654 214 SVL 216 (505)
Q Consensus 214 ~~~ 216 (505)
..+
T Consensus 144 ~~w 146 (238)
T PF13360_consen 144 LLW 146 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 288
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=92.61 E-value=2.5 Score=40.35 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=52.6
Q ss_pred EEEEEeCCCCCce-eeeeccccce------eEEeeeeCCEEEEEEcC-----C--CCCCceEEEeeCCCCCCceEEEcCC
Q 010654 57 FVFYLDVSKPEEL-RVLTPRVVGV------DTAASHRGNHFFITRRS-----D--ELFNSELLACPVDNTSETTVLIPHR 122 (505)
Q Consensus 57 ~l~~~d~~~~~~~-~~l~~~~~~~------~~~~s~dg~~l~~~~~~-----~--~~~~~~l~~~~~~~~~~~~~~~~~~ 122 (505)
.+++++.+++. . +.+.....+. +.-+.||| .+||.+.. . ..+...||+++..+ +..+ ++..+
T Consensus 86 g~~~~~~~~~~-~~t~~~~~~~~~~~~r~ND~~v~pdG-~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g-~~~~-l~~~~ 161 (307)
T COG3386 86 GVRLLDPDTGG-KITLLAEPEDGLPLNRPNDGVVDPDG-RIWFGDMGYFDLGKSEERPTGSLYRVDPDG-GVVR-LLDDD 161 (307)
T ss_pred ccEEEeccCCc-eeEEeccccCCCCcCCCCceeEcCCC-CEEEeCCCccccCccccCCcceEEEEcCCC-CEEE-eecCc
Confidence 36677766664 4 4444333221 22377886 46776655 1 12446899999754 3333 44433
Q ss_pred CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 123 ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 123 ~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.. ...+++|++|...+++.+-...+++.|+++
T Consensus 162 ~~-~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 162 LT-IPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred EE-ecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 22 235789999864444444444567777765
No 289
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=92.58 E-value=9.9 Score=36.30 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=76.2
Q ss_pred eEEEEEeCCCCCceeee--e-ccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE
Q 010654 56 RFVFYLDVSKPEELRVL--T-PRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ 131 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l--~-~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 131 (505)
..+|++|+.+.+-+..+ + +...|. ..++++.+.+++|-...+ .+.++++|+.+..... .+.... ..+..++
T Consensus 106 e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t---~GdV~l~d~~nl~~v~-~I~aH~-~~lAala 180 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT---SGDVVLFDTINLQPVN-TINAHK-GPLAALA 180 (391)
T ss_pred ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCC---CceEEEEEcccceeee-EEEecC-CceeEEE
Confidence 35999999987622222 1 222232 233566667888876553 4689999987643333 444333 3477888
Q ss_pred EeCCEEEE-EEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEE
Q 010654 132 LFIDHLAV-YEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYD 208 (505)
Q Consensus 132 ~~~d~l~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 208 (505)
.+.++-.+ ++.+.| .-++++.++. |..+.+.-.|.. +- .+-..++++++.. +.+++-+.--.+|.++
T Consensus 181 fs~~G~llATASeKG-TVIRVf~v~~-G~kl~eFRRG~~---~~---~IySL~Fs~ds~~--L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 181 FSPDGTLLATASEKG-TVIRVFSVPE-GQKLYEFRRGTY---PV---SIYSLSFSPDSQF--LAASSNTETVHIFKLE 248 (391)
T ss_pred ECCCCCEEEEeccCc-eEEEEEEcCC-ccEeeeeeCCce---ee---EEEEEEECCCCCe--EEEecCCCeEEEEEec
Confidence 88875444 455555 4577888763 443333321111 11 1223456777773 3455555445566654
No 290
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.53 E-value=2.1 Score=32.25 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=45.9
Q ss_pred EEEEeCCCcEEEEEeccc---------------cceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCC
Q 010654 36 GLQASESKKFLFIASESK---------------ITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDEL 99 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~---------------~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~ 99 (505)
++++.+|+..|+|+..+. .+.+|+.+|.++++ .+.|....... -..+|+|++.+++....
T Consensus 2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~-~~vl~~~L~fpNGVals~d~~~vlv~Et~--- 77 (89)
T PF03088_consen 2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKE-TTVLLDGLYFPNGVALSPDESFVLVAETG--- 77 (89)
T ss_dssp EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTE-EEEEEEEESSEEEEEE-TTSSEEEEEEGG---
T ss_pred ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCe-EEEehhCCCccCeEEEcCCCCEEEEEecc---
Confidence 356778866788885542 25799999999996 77776544221 13489999998888754
Q ss_pred CCceEEEeeCCC
Q 010654 100 FNSELLACPVDN 111 (505)
Q Consensus 100 ~~~~l~~~~~~~ 111 (505)
..||.++-+++
T Consensus 78 -~~Ri~rywl~G 88 (89)
T PF03088_consen 78 -RYRILRYWLKG 88 (89)
T ss_dssp -GTEEEEEESSS
T ss_pred -CceEEEEEEeC
Confidence 35898888765
No 291
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=92.39 E-value=3.7 Score=43.68 Aligned_cols=123 Identities=14% Similarity=0.071 Sum_probs=72.3
Q ss_pred CeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeeccccce------eEEeeeeCCEEEE
Q 010654 22 DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGV------DTAASHRGNHFFI 92 (505)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~------~~~~s~dg~~l~~ 92 (505)
.+.++++.+.. ...+...|.|.+|++... +..|+++|++++. .+.-+.+..+.. ...|+|+|++|++
T Consensus 130 ~~~~lrgh~ap-Vl~l~~~p~~~fLAvss~---dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~ 205 (933)
T KOG1274|consen 130 QEKVLRGHDAP-VLQLSYDPKGNFLAVSSC---DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV 205 (933)
T ss_pred hheeecccCCc-eeeeeEcCCCCEEEEEec---CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe
Confidence 33444443332 335678999998887654 3468899998886 233333443322 1349999999988
Q ss_pred EEcCCCCCCceEEEeeCCCCCCceEEEcCC-CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 93 TRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
...++ -+.+++..+ .+....+..+ ....+..+.|++.+.|+++..- ..++.+|+++
T Consensus 206 ~~~d~-----~Vkvy~r~~-we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~-~g~I~vWnv~ 262 (933)
T KOG1274|consen 206 PPVDN-----TVKVYSRKG-WELQFKLRDKLSSSKFSDLQWSPNGKYIAASTL-DGQILVWNVD 262 (933)
T ss_pred eccCC-----eEEEEccCC-ceeheeecccccccceEEEEEcCCCcEEeeecc-CCcEEEEecc
Confidence 87652 455555544 2222122222 2223778899998877775432 1356777776
No 292
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=91.99 E-value=4.9 Score=39.11 Aligned_cols=139 Identities=12% Similarity=0.123 Sum_probs=80.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeecccccee-EEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~s~ 85 (505)
.+|.+||+++.+.+............. .++|.|=+.+|+.+.+. ...|.+.|+.+-. .+..+....+.+. ..|||
T Consensus 250 ~~L~iwD~R~~~~~~~~~~~ah~~~vn-~~~fnp~~~~ilAT~S~--D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP 326 (422)
T KOG0264|consen 250 GKLMIWDTRSNTSKPSHSVKAHSAEVN-CVAFNPFNEFILATGSA--DKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP 326 (422)
T ss_pred CeEEEEEcCCCCCCCcccccccCCcee-EEEeCCCCCceEEeccC--CCcEEEeechhcccCceeccCCCcceEEEEeCC
Confidence 579999998643333333332222222 45788988887766543 3457778877654 1233333332222 34999
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCc-----------eEEEcCCC-CceeeEEEEeCC--EEEEEEecCCeeEEEE
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSET-----------TVLIPHRE-SVKLQDIQLFID--HLAVYEREGGLQKITT 151 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~-~~~i~~~~~~~d--~l~~~~~~~~~~~l~~ 151 (505)
+.+.+.-.+..+ .+|.+.|+..-+++ ..++.+.. -..+.+++|.+. .++..+.++. .|.+
T Consensus 327 h~etvLASSg~D----~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN--~LqI 400 (422)
T KOG0264|consen 327 HNETVLASSGTD----RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDN--ILQI 400 (422)
T ss_pred CCCceeEecccC----CcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCc--eEEE
Confidence 999988776543 48888887542222 22344433 235678999886 4555555553 4556
Q ss_pred EEcC
Q 010654 152 YRLP 155 (505)
Q Consensus 152 ~~~~ 155 (505)
++..
T Consensus 401 W~~s 404 (422)
T KOG0264|consen 401 WQMA 404 (422)
T ss_pred eecc
Confidence 6654
No 293
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=91.97 E-value=7.3 Score=37.17 Aligned_cols=135 Identities=11% Similarity=0.075 Sum_probs=76.5
Q ss_pred eEEEEECCCCCCCCeEEEE---e--cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee--E
Q 010654 9 KAWLHKLEADQSNDICLYH---E--KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--T 81 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~---~--~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~ 81 (505)
.+|+||+.+= .+++ . +++.=......+..+.++++-. +.+..+|++.|+.+-+ .....+..++.. .
T Consensus 107 ~IyIydI~~M-----klLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~-s~t~GdV~l~d~~nl~-~v~~I~aH~~~lAal 179 (391)
T KOG2110|consen 107 SIYIYDIKDM-----KLLHTIETTPPNPKGLCALSPNNANCYLAYPG-STTSGDVVLFDTINLQ-PVNTINAHKGPLAAL 179 (391)
T ss_pred cEEEEecccc-----eeehhhhccCCCccceEeeccCCCCceEEecC-CCCCceEEEEEcccce-eeeEEEecCCceeEE
Confidence 4888988542 2222 1 2222234555667777888763 3357899999988765 332223333433 3
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC-CceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.|++||..|+=-++. | . -|-++.+.+ |..-..+-..- -..|-+++.++|.-++++..+. ..++++.++.
T Consensus 180 afs~~G~llATASeK-G-T--VIRVf~v~~-G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T-eTVHiFKL~~ 249 (391)
T KOG2110|consen 180 AFSPDGTLLATASEK-G-T--VIRVFSVPE-GQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT-ETVHIFKLEK 249 (391)
T ss_pred EECCCCCEEEEeccC-c-e--EEEEEEcCC-ccEeeeeeCCceeeEEEEEEECCCCCeEEEecCC-CeEEEEEecc
Confidence 499999988866654 2 2 233334433 21111222211 2356788888988777776654 3478888763
No 294
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=91.82 E-value=13 Score=35.77 Aligned_cols=167 Identities=13% Similarity=-0.018 Sum_probs=79.5
Q ss_pred ceEEEEEEeCCCcEEEEEecc------ccceE-EEEEeCCCCC-ceeeeecc---cc-c---eeEEeeeeCCEEEEEEcC
Q 010654 32 IYSLGLQASESKKFLFIASES------KITRF-VFYLDVSKPE-ELRVLTPR---VV-G---VDTAASHRGNHFFITRRS 96 (505)
Q Consensus 32 ~~~~~~~~SpDg~~i~~~~~~------~~~~~-l~~~d~~~~~-~~~~l~~~---~~-~---~~~~~s~dg~~l~~~~~~ 96 (505)
.|...+..||||+.++....- ..+++ |-+.|..+-. ......|. .. . ....+|.||+++++..-.
T Consensus 36 g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~T 115 (342)
T PF06433_consen 36 GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFT 115 (342)
T ss_dssp ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEES
T ss_pred ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccC
Confidence 345567889999998765421 13444 4456888764 12222222 11 1 123489999998888654
Q ss_pred CCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCe
Q 010654 97 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 176 (505)
Q Consensus 97 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (505)
|...+-++|++...... .+. .++ +..-+-+.+++ +.....+|. +..+.++.+|+..+.. ..+=.++..
T Consensus 116 ---Pa~SVtVVDl~~~kvv~-ei~-~PG-C~~iyP~~~~~-F~~lC~DGs--l~~v~Ld~~Gk~~~~~---t~~F~~~~d 183 (342)
T PF06433_consen 116 ---PATSVTVVDLAAKKVVG-EID-TPG-CWLIYPSGNRG-FSMLCGDGS--LLTVTLDADGKEAQKS---TKVFDPDDD 183 (342)
T ss_dssp ---SSEEEEEEETTTTEEEE-EEE-GTS-EEEEEEEETTE-EEEEETTSC--EEEEEETSTSSEEEEE---EEESSTTTS
T ss_pred ---CCCeEEEEECCCCceee-eec-CCC-EEEEEecCCCc-eEEEecCCc--eEEEEECCCCCEeEee---ccccCCCCc
Confidence 55689999998621111 111 112 22233334455 334444443 3445566556532110 011111110
Q ss_pred eeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCcE
Q 010654 177 YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 214 (505)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 214 (505)
..+.....+..++.++|. +--..+|.+++.+...
T Consensus 184 p~f~~~~~~~~~~~~~F~----Sy~G~v~~~dlsg~~~ 217 (342)
T PF06433_consen 184 PLFEHPAYSRDGGRLYFV----SYEGNVYSADLSGDSA 217 (342)
T ss_dssp -B-S--EEETTTTEEEEE----BTTSEEEEEEETTSSE
T ss_pred ccccccceECCCCeEEEE----ecCCEEEEEeccCCcc
Confidence 011111112344555552 2336788888876653
No 295
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.45 E-value=0.34 Score=49.34 Aligned_cols=67 Identities=10% Similarity=0.163 Sum_probs=47.0
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcCCC-----CCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMKTD-----DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 492 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 492 (505)
.+|+.||..|..||+..+..+++++.+.-.. -+++.|-..||.+|...-.-....+.+..+.+|.++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 5999999999999999999999999775321 234444444499995432222334555568888876
No 296
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=91.30 E-value=16 Score=35.85 Aligned_cols=135 Identities=11% Similarity=0.135 Sum_probs=71.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE---Eee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT---AAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~---~~s 84 (505)
..+++|..+.... ..+....+.. .-.....|.|.|++..++... .-.-|..++......+....++.+ .|.
T Consensus 283 ~~i~vws~~~~s~--~~~~~~h~~~-V~~ls~h~tgeYllsAs~d~~---w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 283 EIIRVWSVPLSSE--PTSSRPHEEP-VTGLSLHPTGEYLLSASNDGT---WAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred ceEEeeccccccC--cccccccccc-ceeeeeccCCcEEEEecCCce---EEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 3467777766432 2222211111 123456788888776555431 222355555423333332222333 399
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
||| ++|-+. .+.+.|-.+|+....... -++.. ...+..+..+.++-+++...+... +.+||+..
T Consensus 357 pDg--Lifgtg---t~d~~vkiwdlks~~~~a-~Fpgh-t~~vk~i~FsENGY~Lat~add~~-V~lwDLRK 420 (506)
T KOG0289|consen 357 PDG--LIFGTG---TPDGVVKIWDLKSQTNVA-KFPGH-TGPVKAISFSENGYWLATAADDGS-VKLWDLRK 420 (506)
T ss_pred CCc--eEEecc---CCCceEEEEEcCCccccc-cCCCC-CCceeEEEeccCceEEEEEecCCe-EEEEEehh
Confidence 997 344432 234588888987633222 34443 335888999988766665544322 78898863
No 297
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=91.27 E-value=5.5 Score=40.62 Aligned_cols=113 Identities=13% Similarity=0.125 Sum_probs=64.5
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeC-CCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDV-SKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~-~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
...+..|||||++|+ ... ....|++.|+ +.+..++.+..+...+. ..|+|+| .+++....++ -+.+.|+.
T Consensus 205 ~v~~~~fs~d~~~l~-s~s--~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~----tvriWd~~ 276 (456)
T KOG0266|consen 205 GVSDVAFSPDGSYLL-SGS--DDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDG----TVRIWDVR 276 (456)
T ss_pred ceeeeEECCCCcEEE-Eec--CCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCC----cEEEEecc
Confidence 344789999999653 222 2345666777 33333566655543332 2399999 5666655432 45666776
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+ ++..-.+....+ .+..++..++.-+++... ....+.+|++.+
T Consensus 277 ~-~~~~~~l~~hs~-~is~~~f~~d~~~l~s~s-~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 277 T-GECVRKLKGHSD-GISGLAFSPDGNLLVSAS-YDGTIRVWDLET 319 (456)
T ss_pred C-CeEEEeeeccCC-ceEEEEECCCCCEEEEcC-CCccEEEEECCC
Confidence 5 333224443333 477777777754444332 234578898764
No 298
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=91.17 E-value=4.8 Score=41.37 Aligned_cols=137 Identities=14% Similarity=0.207 Sum_probs=78.1
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceE---EEEEEeCCCcEEEEEeccccceEEEEEeCCCCC--ceeeeeccc-cce
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYS---LGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRV-VGV 79 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~---~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~--~~~~l~~~~-~~~ 79 (505)
+++++.+++|.... ......-.+.+... ....+|-|+..+++.+ .+..+|...+++++. +...+++.. .+.
T Consensus 401 t~~~~~iy~L~~~~-~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s--~~~~~le~~el~~ps~kel~~~~~~~~~~~ 477 (691)
T KOG2048|consen 401 TVSRTKIYRLQPDP-NVKVINVDDVPLALLDASAISFTIDKNKLFLVS--KNIFSLEEFELETPSFKELKSIQSQAKCPS 477 (691)
T ss_pred eccceEEEEeccCc-ceeEEEeccchhhhccceeeEEEecCceEEEEe--cccceeEEEEecCcchhhhhccccccCCCc
Confidence 45677777776543 11111112222222 2345788888888776 334567777777765 333344331 121
Q ss_pred --eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE---EeCCEEEEEEecCCeeEEEEEEc
Q 010654 80 --DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ---LFIDHLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 80 --~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~d~l~~~~~~~~~~~l~~~~~ 154 (505)
....|+||++|+..+.. ..++.+++++ .+..|+. ...+..+.... +..+++++.... .|++-|++
T Consensus 478 I~~l~~SsdG~yiaa~~t~-----g~I~v~nl~~-~~~~~l~-~rln~~vTa~~~~~~~~~~lvvats~---nQv~efdi 547 (691)
T KOG2048|consen 478 ISRLVVSSDGNYIAAISTR-----GQIFVYNLET-LESHLLK-VRLNIDVTAAAFSPFVRNRLVVATSN---NQVFEFDI 547 (691)
T ss_pred ceeEEEcCCCCEEEEEecc-----ceEEEEEccc-ceeecch-hccCcceeeeeccccccCcEEEEecC---CeEEEEec
Confidence 23489999999999854 4899999987 5555433 22223343333 333466665444 35777777
Q ss_pred C
Q 010654 155 P 155 (505)
Q Consensus 155 ~ 155 (505)
+
T Consensus 548 ~ 548 (691)
T KOG2048|consen 548 E 548 (691)
T ss_pred c
Confidence 4
No 299
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=91.16 E-value=8.8 Score=38.82 Aligned_cols=178 Identities=11% Similarity=0.046 Sum_probs=89.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee----------------
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---------------- 71 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---------------- 71 (505)
.-||+|+--++ +...+++. +.+...++.|++||++|++-.... .+.++|....+..+.
T Consensus 197 ~~vylW~~~s~--~v~~l~~~-~~~~vtSv~ws~~G~~LavG~~~g---~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~ 270 (484)
T KOG0305|consen 197 QSVYLWSASSG--SVTELCSF-GEELVTSVKWSPDGSHLAVGTSDG---TVQIWDVKEQKKTRTLRGSHASRVGSLAWNS 270 (484)
T ss_pred ceEEEEecCCC--ceEEeEec-CCCceEEEEECCCCCEEEEeecCC---eEEEEehhhccccccccCCcCceeEEEeccC
Confidence 35899997664 34455543 244566889999999998875432 233333222110000
Q ss_pred --------------------------eecc-ccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCC
Q 010654 72 --------------------------LTPR-VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES 124 (505)
Q Consensus 72 --------------------------l~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 124 (505)
+..+ ++-.-..|++|+++++=-. ....+++.|... ..+...+.....
T Consensus 271 ~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGg-----nDN~~~Iwd~~~-~~p~~~~~~H~a 344 (484)
T KOG0305|consen 271 SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGG-----NDNVVFIWDGLS-PEPKFTFTEHTA 344 (484)
T ss_pred ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCC-----CccceEeccCCC-ccccEEEeccce
Confidence 0000 0001123788877665222 224777777643 122222333222
Q ss_pred ceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCc
Q 010654 125 VKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP 202 (505)
Q Consensus 125 ~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 202 (505)
.+-.++|.+- .++.+..-..-.++.+++..+ |..+..+-++- .|-.+.+++..+.++.+......--
T Consensus 345 -AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~-g~~i~~vdtgs---------QVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 345 -AVKALAWCPWQSGLLATGGGSADRCIKFWNTNT-GARIDSVDTGS---------QVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred -eeeEeeeCCCccCceEEcCCCcccEEEEEEcCC-CcEecccccCC---------ceeeEEEcCCCCEEEEecCCCCCcE
Confidence 3567777774 444443322234677888653 43332221111 1333556777777776666555544
Q ss_pred eEEEEE
Q 010654 203 SVYDYD 208 (505)
Q Consensus 203 ~~~~~~ 208 (505)
.||.+.
T Consensus 414 ~lw~~p 419 (484)
T KOG0305|consen 414 TLWKYP 419 (484)
T ss_pred EEEecc
Confidence 555553
No 300
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=90.98 E-value=1.7 Score=40.44 Aligned_cols=103 Identities=19% Similarity=0.251 Sum_probs=43.2
Q ss_pred CCCcEEEEEcCCCCcCCCC-CCchhHHHHHHC---CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHH-HHHHH
Q 010654 261 GSDPLLLYGYGSYEICNDP-AFNSSRLSLLDR---GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIK 335 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~-~~~~~~~~l~~~---G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~ 335 (505)
.+.| ||+.||-..+...+ ++. ....+.++ |..|..++. |.+.. .+ .. .... ..+.+..+.+ +.+.+
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~-~i~~~i~~~~PG~yV~si~i-g~~~~-~D-~~--~s~f--~~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMG-SIKELIEEQHPGTYVHSIEI-GNDPS-ED-VE--NSFF--GNVNDQVEQVCEQLAN 74 (279)
T ss_dssp SS---EEEE--TT--S--TTTHH-HHHHHHHHHSTT--EEE--S-SSSHH-HH-HH--HHHH--SHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEcCccccCChhHHH-HHHHHHHHhCCCceEEEEEE-CCCcc-hh-hh--hhHH--HHHHHHHHHHHHHHhh
Confidence 3445 45559975444332 222 23444443 766777664 22211 00 00 0001 2233333333 33444
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHhhCCC-ceeEEEec
Q 010654 336 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAA 373 (505)
Q Consensus 336 ~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~ 373 (505)
.+... +-+-++|+|.||.++=.++.+.++ .++-.|+.
T Consensus 75 ~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 75 DPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp -GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred Chhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 33332 568899999999998888887765 35555554
No 301
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=90.95 E-value=5 Score=41.92 Aligned_cols=142 Identities=12% Similarity=0.088 Sum_probs=77.5
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHR 86 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~d 86 (505)
...|++|.+.|++--+ ++.+.... ..+...+|+|..|+ +.+...+-++|-+=-..+. ...+.-..+.....|+||
T Consensus 457 ~F~IfvWS~qTGqllD--iLsGHEgP-Vs~l~f~~~~~~La-S~SWDkTVRiW~if~s~~~-vEtl~i~sdvl~vsfrPd 531 (893)
T KOG0291|consen 457 SFEIFVWSVQTGQLLD--ILSGHEGP-VSGLSFSPDGSLLA-SGSWDKTVRIWDIFSSSGT-VETLEIRSDVLAVSFRPD 531 (893)
T ss_pred eEEEEEEEeecCeeee--hhcCCCCc-ceeeEEccccCeEE-eccccceEEEEEeeccCce-eeeEeeccceeEEEEcCC
Confidence 4579999999986433 44433222 23556899998654 3332233466666555554 555554444445669999
Q ss_pred CCEEEEEEcCC------CCCCceEEEee----CCCCCCce-EEEcCC---CCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 87 GNHFFITRRSD------ELFNSELLACP----VDNTSETT-VLIPHR---ESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 87 g~~l~~~~~~~------~~~~~~l~~~~----~~~~~~~~-~~~~~~---~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
|+.|++.+-++ .....++..+| +.+ |... -.++.. ....+..++.+.|+-++.+.-. ...+.+|
T Consensus 532 G~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~-gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~-sn~iCiY 609 (893)
T KOG0291|consen 532 GKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSG-GRKETDRITAENSAKGKTFTTICYSADGKCILAGGE-SNSICIY 609 (893)
T ss_pred CCeEEEEEecceEEEEEhhhceeeccccchhhccc-cccccceeehhhcccCCceEEEEEcCCCCEEEecCC-cccEEEE
Confidence 99999998652 01122332222 111 1111 022222 1234667788887655544322 2347888
Q ss_pred EcC
Q 010654 153 RLP 155 (505)
Q Consensus 153 ~~~ 155 (505)
++.
T Consensus 610 ~v~ 612 (893)
T KOG0291|consen 610 DVP 612 (893)
T ss_pred ECc
Confidence 876
No 302
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=90.84 E-value=5.2 Score=37.32 Aligned_cols=106 Identities=10% Similarity=0.054 Sum_probs=52.0
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
+-+|.+||+-|-.. -.++... -.=..+..||+|||.|+-++. ...+-+.|+..|.-++++.-.. -+. ..|.|
T Consensus 44 nG~vvI~D~~T~~i--ar~lsaH-~~pi~sl~WS~dgr~LltsS~---D~si~lwDl~~gs~l~rirf~s-pv~~~q~hp 116 (405)
T KOG1273|consen 44 NGRVVIYDFDTFRI--ARMLSAH-VRPITSLCWSRDGRKLLTSSR---DWSIKLWDLLKGSPLKRIRFDS-PVWGAQWHP 116 (405)
T ss_pred CCcEEEEEccccch--hhhhhcc-ccceeEEEecCCCCEeeeecC---CceeEEEeccCCCceeEEEccC-ccceeeecc
Confidence 34677888766421 1222211 111346799999999764322 2346667777765122222111 112 23777
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCc
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV 125 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 125 (505)
......+.+-... .-+++++.. .... +++.+.+.
T Consensus 117 ~k~n~~va~~~~~----sp~vi~~s~-~~h~-~Lp~d~d~ 150 (405)
T KOG1273|consen 117 RKRNKCVATIMEE----SPVVIDFSD-PKHS-VLPKDDDG 150 (405)
T ss_pred ccCCeEEEEEecC----CcEEEEecC-Ccee-eccCCCcc
Confidence 6665555554422 234455543 2333 55554443
No 303
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=90.70 E-value=17 Score=36.74 Aligned_cols=112 Identities=8% Similarity=0.027 Sum_probs=66.6
Q ss_pred EEEEEeCCCcEEEEEecc-c--------cceEEEEEeCCCCCceeeeecccccee--EEeeeeCCEEEEEEcCCCCCCce
Q 010654 35 LGLQASESKKFLFIASES-K--------ITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSE 103 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~-~--------~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~ 103 (505)
+...|.+-|.-|++.... . ..+.||+++.+ |. -..+.-...|.. +.|+|+|+.+.+...-- + ..
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~-s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfM--P-Ak 295 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GE-SVSVPLLKEGPVHDVTWSPSGREFAVVYGFM--P-AK 295 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-Cc-eEEEecCCCCCceEEEECCCCCEEEEEEecc--c-ce
Confidence 356799999887776543 2 24689999998 33 222222223433 45999999998887432 2 46
Q ss_pred EEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcCC
Q 010654 104 LLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+-.+|+.+ .....+++.+.. .+-+++ +-++++.--|-...+.+||+..
T Consensus 296 vtifnlr~--~~v~df~egpRN---~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n 345 (566)
T KOG2315|consen 296 VTIFNLRG--KPVFDFPEGPRN---TAFFNPHGNIILLAGFGNLPGDMEVWDVPN 345 (566)
T ss_pred EEEEcCCC--CEeEeCCCCCcc---ceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence 77778764 332244444433 333444 3444444445566788999863
No 304
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=90.49 E-value=17 Score=34.80 Aligned_cols=152 Identities=13% Similarity=0.141 Sum_probs=84.9
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
++.+|+.++ +.+....+. -|+.++.+|..+-.++.+.+.+. ..||+||..|+ .... .++|.+....+ +..
T Consensus 70 vsl~P~~~l-~aTGGgDD~--AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLA-TGdm----sG~v~v~~~st-g~~ 140 (399)
T KOG0296|consen 70 VSLHPNNNL-VATGGGDDL--AFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLA-TGDM----SGKVLVFKVST-GGE 140 (399)
T ss_pred EEeCCCCce-EEecCCCce--EEEEEccCCcceeEecCCCCceEEEEEccCceEEE-ecCC----CccEEEEEccc-Cce
Confidence 456785543 444333333 45556666653555665554443 34999997554 2222 24788888776 667
Q ss_pred eEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCCEEEEE
Q 010654 116 TVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFH 194 (505)
Q Consensus 116 ~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (505)
+|.+... -..|..+.|-+. .++++-..+| .++.|+++.. +..+ .++...-....-.+.|+|++++..
T Consensus 141 ~~~~~~e-~~dieWl~WHp~a~illAG~~DG--svWmw~ip~~-~~~k--------v~~Gh~~~ct~G~f~pdGKr~~tg 208 (399)
T KOG0296|consen 141 QWKLDQE-VEDIEWLKWHPRAHILLAGSTDG--SVWMWQIPSQ-ALCK--------VMSGHNSPCTCGEFIPDGKRILTG 208 (399)
T ss_pred EEEeecc-cCceEEEEecccccEEEeecCCC--cEEEEECCCc-ceee--------EecCCCCCcccccccCCCceEEEE
Confidence 7855422 224677777776 4555555555 4789998742 2111 111211112223456788877655
Q ss_pred EecCCCCceEEEEECCCCc
Q 010654 195 YSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~ 213 (505)
+. -..|...+++++.
T Consensus 209 y~----dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 209 YD----DGTIIVWNPKTGQ 223 (399)
T ss_pred ec----CceEEEEecCCCc
Confidence 54 3566777777775
No 305
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=90.37 E-value=1.9 Score=44.74 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=53.3
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--Eeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~ 85 (505)
+.|-+||+-++ ..+++|.+... -....+.||+|++|+- ......|.++|+.++..+..+..+ .+..+ .||.
T Consensus 557 ~tVRlWDv~~G--~~VRiF~GH~~-~V~al~~Sp~Gr~LaS---g~ed~~I~iWDl~~~~~v~~l~~H-t~ti~SlsFS~ 629 (707)
T KOG0263|consen 557 RTVRLWDVSTG--NSVRIFTGHKG-PVTALAFSPCGRYLAS---GDEDGLIKIWDLANGSLVKQLKGH-TGTIYSLSFSR 629 (707)
T ss_pred ceEEEEEcCCC--cEEEEecCCCC-ceEEEEEcCCCceEee---cccCCcEEEEEcCCCcchhhhhcc-cCceeEEEEec
Confidence 35778888775 46889976433 2446789999999863 233456888999987633344444 34443 4999
Q ss_pred eCCEEEEEE
Q 010654 86 RGNHFFITR 94 (505)
Q Consensus 86 dg~~l~~~~ 94 (505)
||.-|+.-+
T Consensus 630 dg~vLasgg 638 (707)
T KOG0263|consen 630 DGNVLASGG 638 (707)
T ss_pred CCCEEEecC
Confidence 998776544
No 306
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.35 E-value=0.5 Score=39.98 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=20.7
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCC
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p 364 (505)
...+|.++|||+||.++..++....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3478999999999999988877644
No 307
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=90.14 E-value=8.1 Score=34.92 Aligned_cols=128 Identities=14% Similarity=0.112 Sum_probs=71.1
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee--cccccee-EEeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVVGVD-TAASH 85 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~--~~~~~~~-~~~s~ 85 (505)
.|.+||..|+.. ...|.-..+ .-+...|+||++|.+.-.+ .|-..|..+-. +|. ....++. .+.+|
T Consensus 166 tVRLWD~rTgt~-v~sL~~~s~---VtSlEvs~dG~ilTia~gs----sV~Fwdaksf~---~lKs~k~P~nV~SASL~P 234 (334)
T KOG0278|consen 166 TVRLWDHRTGTE-VQSLEFNSP---VTSLEVSQDGRILTIAYGS----SVKFWDAKSFG---LLKSYKMPCNVESASLHP 234 (334)
T ss_pred ceEEEEeccCcE-EEEEecCCC---CcceeeccCCCEEEEecCc----eeEEecccccc---ceeeccCccccccccccC
Confidence 356677777632 222322111 2256789999998776443 35556665432 222 1122222 34788
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEE-EecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~-~~~~~~~~l~~~~~~ 155 (505)
+. .+++.... ...+|.+|-.+ |++.-..-......+..+..++|+.+++ -.++|.- .+|...
T Consensus 235 ~k-~~fVaGge----d~~~~kfDy~T-geEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi--rlWQt~ 297 (334)
T KOG0278|consen 235 KK-EFFVAGGE----DFKVYKFDYNT-GEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI--RLWQTT 297 (334)
T ss_pred CC-ceEEecCc----ceEEEEEeccC-CceeeecccCCCCceEEEEECCCCceeeccCCCceE--EEEEec
Confidence 76 55555433 36899999876 5443232223344677888999976655 4566654 445543
No 308
>PLN02606 palmitoyl-protein thioesterase
Probab=90.09 E-value=3.8 Score=38.58 Aligned_cols=100 Identities=16% Similarity=0.081 Sum_probs=52.6
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.+.|+|| .||-......+++....+.+.+. |.-+..+. .|.+. . ...-....+.+..+.+.|.+.+..
T Consensus 25 ~~~PvVi-wHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~----~s~~~~~~~Qv~~vce~l~~~~~L 93 (306)
T PLN02606 25 LSVPFVL-FHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----Q----DSLFMPLRQQASIACEKIKQMKEL 93 (306)
T ss_pred CCCCEEE-ECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----c----cccccCHHHHHHHHHHHHhcchhh
Confidence 3456554 59976444444555545555423 66444443 33211 0 011011223333344444443333
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEe
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVA 372 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~ 372 (505)
.+-+-++|+|.||.++=.++.+.|+ .++-.|+
T Consensus 94 -~~G~naIGfSQGglflRa~ierc~~~p~V~nlIS 127 (306)
T PLN02606 94 -SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVS 127 (306)
T ss_pred -cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEE
Confidence 2458899999999999888888766 2444443
No 309
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=89.45 E-value=18 Score=33.75 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=83.5
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCC-------------
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDEL------------- 99 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~------------- 99 (505)
..+...|+||..++..+. ...|.++|..+++..+.+....-|.+. .|.++...++..++....
T Consensus 17 i~sl~fs~~G~~litss~---dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkyl 93 (311)
T KOG1446|consen 17 INSLDFSDDGLLLITSSE---DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYL 93 (311)
T ss_pred eeEEEecCCCCEEEEecC---CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceE
Confidence 346788999998776332 335777888887645555444344443 255555555555542110
Q ss_pred -----CCceEEEeeCCCCCCceEEEcCCCCcee-------------------eEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 100 -----FNSELLACPVDNTSETTVLIPHRESVKL-------------------QDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 100 -----~~~~l~~~~~~~~~~~~~~~~~~~~~~i-------------------~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
-..++..+.+.- .... .+....|..+ .-.+.++.+++|+...++. .+.+|++.
T Consensus 94 RYF~GH~~~V~sL~~sP-~~d~-FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~-~IkLyD~R 170 (311)
T KOG1446|consen 94 RYFPGHKKRVNSLSVSP-KDDT-FLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSE-LIKLYDLR 170 (311)
T ss_pred EEcCCCCceEEEEEecC-CCCe-EEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCC-eEEEEEec
Confidence 011222222211 1111 1111111111 1234566788888776654 78889876
Q ss_pred C-CCCcccccCCCceeeccCCe-eeecCCCCcccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 156 A-VGEPLKSLQGGKSVEFIDPV-YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 156 ~-~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. +.++- ..+.++.+. -.+..+.+|+||+.++++.+ -..++++|.=+|.
T Consensus 171 s~dkgPF------~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~----~s~~~~lDAf~G~ 220 (311)
T KOG1446|consen 171 SFDKGPF------TTFSITDNDEAEWTDLEFSPDGKSILLSTN----ASFIYLLDAFDGT 220 (311)
T ss_pred ccCCCCc------eeEccCCCCccceeeeEEcCCCCEEEEEeC----CCcEEEEEccCCc
Confidence 3 12211 111111111 11344667899998887654 3467888876676
No 310
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=89.26 E-value=18 Score=36.31 Aligned_cols=128 Identities=12% Similarity=0.110 Sum_probs=69.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee--eeccccce-eEEee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV--LTPRVVGV-DTAAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~--l~~~~~~~-~~~~s 84 (505)
.+|++|.|-.+....+.+..+... =...++.||||++|+..- ....+.++|+.+.. .+. ..-+...+ -..||
T Consensus 465 gkvhvysl~g~~l~ee~~~~~h~a-~iT~vaySpd~~yla~~D---a~rkvv~yd~~s~~-~~~~~w~FHtakI~~~aWs 539 (603)
T KOG0318|consen 465 GKVHVYSLSGDELKEEAKLLEHRA-AITDVAYSPDGAYLAAGD---ASRKVVLYDVASRE-VKTNRWAFHTAKINCVAWS 539 (603)
T ss_pred ceEEEEEecCCcccceeeeecccC-CceEEEECCCCcEEEEec---cCCcEEEEEcccCc-eecceeeeeeeeEEEEEeC
Confidence 458888884332233333332211 123568999999987652 23467888888875 321 11111112 23599
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCe
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGL 146 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~ 146 (505)
|+.+.++=-+- ..-++.++++.+..--......... +..+.|..+.-++..-++..
T Consensus 540 P~n~~vATGSl-----Dt~Viiysv~kP~~~i~iknAH~~g-Vn~v~wlde~tvvSsG~Da~ 595 (603)
T KOG0318|consen 540 PNNKLVATGSL-----DTNVIIYSVKKPAKHIIIKNAHLGG-VNSVAWLDESTVVSSGQDAN 595 (603)
T ss_pred CCceEEEeccc-----cceEEEEEccChhhheEeccccccC-ceeEEEecCceEEeccCcce
Confidence 99886652221 1367777776533221122222333 67788887766666655543
No 311
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.24 E-value=0.52 Score=49.29 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHHHHc--C--CCC---CCcEEEEeeChHHHHHHHHHhhCCCceeEEE
Q 010654 321 NTFTDFIACAEYLIKN--C--YCT---KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 371 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~--~--~~d---~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v 371 (505)
...+-+.+|+.++.+. + .-+ |.-|.++||||||..+.++++ +|+..+..|
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sV 210 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSV 210 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchh
Confidence 4556677888887764 2 233 667999999999988877777 575555444
No 312
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=89.12 E-value=3.2 Score=40.17 Aligned_cols=143 Identities=12% Similarity=-0.002 Sum_probs=73.3
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-ccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
-...++|.|+|++|.-.+ .+. ..-+.|+.++. .-.+.. +..+.. ..|.+||.-+. ....+ ...+++ |+.
T Consensus 263 RVs~VafHPsG~~L~Tas--fD~-tWRlWD~~tk~-ElL~QEGHs~~v~~iaf~~DGSL~~-tGGlD--~~~RvW--DlR 333 (459)
T KOG0272|consen 263 RVSRVAFHPSGKFLGTAS--FDS-TWRLWDLETKS-ELLLQEGHSKGVFSIAFQPDGSLAA-TGGLD--SLGRVW--DLR 333 (459)
T ss_pred hheeeeecCCCceeeecc--ccc-chhhcccccch-hhHhhcccccccceeEecCCCceee-ccCcc--chhhee--ecc
Confidence 345788999999975332 222 23345777775 222222 222332 34889986433 32222 123444 665
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEE-ecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccCC
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYE-REGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSR 189 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (505)
+ |...-.+....+ .|-++.|++++..++. ..+ ....+|++..... .-+.|...-.++.+-+++..+
T Consensus 334 t-gr~im~L~gH~k-~I~~V~fsPNGy~lATgs~D--nt~kVWDLR~r~~---------ly~ipAH~nlVS~Vk~~p~~g 400 (459)
T KOG0272|consen 334 T-GRCIMFLAGHIK-EILSVAFSPNGYHLATGSSD--NTCKVWDLRMRSE---------LYTIPAHSNLVSQVKYSPQEG 400 (459)
T ss_pred c-CcEEEEeccccc-ceeeEeECCCceEEeecCCC--CcEEEeeeccccc---------ceecccccchhhheEecccCC
Confidence 4 333224554444 3779999998754443 333 3456787753111 112222222233444566677
Q ss_pred EEEEEEec
Q 010654 190 ILRFHYSS 197 (505)
Q Consensus 190 ~~~~~~~~ 197 (505)
.++++++-
T Consensus 401 ~fL~Tasy 408 (459)
T KOG0272|consen 401 YFLVTASY 408 (459)
T ss_pred eEEEEccc
Confidence 77766653
No 313
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.00 E-value=16 Score=33.92 Aligned_cols=56 Identities=14% Similarity=0.103 Sum_probs=37.2
Q ss_pred ceEEEEEeCCCCCceeeeeccccceeEE----eeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVDTA----ASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~~~----~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
-+..++.|..+.+++..+.. ..+..++ |||||++||-..|+-.....-|-+||...
T Consensus 90 Gtf~~vfD~~~~~~pv~~~s-~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~ 149 (366)
T COG3490 90 GTFAMVFDPNGAQEPVTLVS-QEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE 149 (366)
T ss_pred CceEEEECCCCCcCcEEEec-ccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc
Confidence 35678888888764444433 3343332 99999999988876444456777888653
No 314
>PLN02633 palmitoyl protein thioesterase family protein
Probab=88.97 E-value=5.5 Score=37.58 Aligned_cols=101 Identities=17% Similarity=0.120 Sum_probs=55.2
Q ss_pred CCCcEEEEEcCCCCcCCCCCCchhHHHHHHC-CcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCC
Q 010654 261 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 339 (505)
Q Consensus 261 ~~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 339 (505)
.+.|+||+ ||-......++.....+.+.+. |.-|.++.. |.+ . .+ .+-....+.+..+.+.+.+....
T Consensus 24 ~~~P~Viw-HG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~-----~~---s~~~~~~~Qve~vce~l~~~~~l 92 (314)
T PLN02633 24 VSVPFIML-HGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG-V-----GD---SWLMPLTQQAEIACEKVKQMKEL 92 (314)
T ss_pred CCCCeEEe-cCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC-c-----cc---cceeCHHHHHHHHHHHHhhchhh
Confidence 45676655 9866555555554444555443 666665544 222 1 00 11112223333334444443332
Q ss_pred CCCcEEEEeeChHHHHHHHHHhhCCC--ceeEEEec
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAA 373 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~~p~--~~~a~v~~ 373 (505)
.+-+-++|+|.||.++=.++.+.|+ .++-.|+.
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 2458899999999999888888776 35555543
No 315
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=88.95 E-value=13 Score=37.28 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=82.8
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc------eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG------VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.|.|+.+..+++.+....-++|-++-...+ .+.+.+...+ ....|++||+.|+-- ..+|+ -+++ +..+
T Consensus 275 ~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-~qVik~k~~~g~Rv~~tsC~~nrdg~~iAag-c~DGS--IQ~W--~~~~ 348 (641)
T KOG0772|consen 275 CWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-LQVIKTKPAGGKRVPVTSCAWNRDGKLIAAG-CLDGS--IQIW--DKGS 348 (641)
T ss_pred ccccCcccceEEecCCCcEEEEecCCchhh-eeEEeeccCCCcccCceeeecCCCcchhhhc-ccCCc--eeee--ecCC
Confidence 699999998888776666677776544333 4444433222 123399999885422 22221 2333 2221
Q ss_pred CC-CceEEE--cCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccC
Q 010654 112 TS-ETTVLI--PHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSS 188 (505)
Q Consensus 112 ~~-~~~~~~--~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (505)
.. .+...+ ++.....|..+..+.|+-+++.+-.. ..|.+|+|.--.+ +|-.. ..++. .+.-....+||+.
T Consensus 349 ~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D-~tLKvWDLrq~kk---pL~~~--tgL~t-~~~~tdc~FSPd~ 421 (641)
T KOG0772|consen 349 RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD-DTLKVWDLRQFKK---PLNVR--TGLPT-PFPGTDCCFSPDD 421 (641)
T ss_pred cccccceEeeeccCCCCceeEEEeccccchhhhccCC-Cceeeeecccccc---chhhh--cCCCc-cCCCCccccCCCc
Confidence 11 111122 23444568888888887666655332 3477888753122 22110 11111 0111123467776
Q ss_pred CEEEEEEecCC---CCceEEEEECCC
Q 010654 189 RILRFHYSSLR---TPPSVYDYDMDM 211 (505)
Q Consensus 189 ~~~~~~~~~~~---~p~~~~~~~~~~ 211 (505)
. ++++.+|.. .++.|+.++..+
T Consensus 422 k-li~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 422 K-LILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred e-EEEecccccCCCCCceEEEEeccc
Confidence 6 666666632 555677777543
No 316
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=88.79 E-value=20 Score=33.24 Aligned_cols=140 Identities=9% Similarity=-0.030 Sum_probs=70.5
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeee-cccc-ce-eE
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLT-PRVV-GV-DT 81 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~-~~~~-~~-~~ 81 (505)
....||....+.. ...+... .-...|.|++||...++.. ......++. +..++. ....+. +... .+ .+
T Consensus 46 ~~~~L~~~~~~~~---~~~~~~g---~~l~~PS~d~~g~~W~v~~-~~~~~~~~~-~~~~g~~~~~~v~~~~~~~~I~~l 117 (253)
T PF10647_consen 46 GGRSLYVGPAGGP---VRPVLTG---GSLTRPSWDPDGWVWTVDD-GSGGVRVVR-DSASGTGEPVEVDWPGLRGRITAL 117 (253)
T ss_pred CCCEEEEEcCCCc---ceeeccC---CccccccccCCCCEEEEEc-CCCceEEEE-ecCCCcceeEEecccccCCceEEE
Confidence 3456777766542 2233221 2345789999976544433 222223333 333343 122222 2111 22 34
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCC--CCCCceE-----EEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVD--NTSETTV-----LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 153 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~-----~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~ 153 (505)
.+||||.++++.....+. .+|++.-+. +.+.... .+.......+.++.|.++ .|++.....+.....++.
T Consensus 118 ~vSpDG~RvA~v~~~~~~--~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~~v~ 195 (253)
T PF10647_consen 118 RVSPDGTRVAVVVEDGGG--GRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVRLVS 195 (253)
T ss_pred EECCCCcEEEEEEecCCC--CeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCCceeEEEE
Confidence 599999999999866432 577776553 2121111 222222335678999887 565555554443333344
Q ss_pred cC
Q 010654 154 LP 155 (505)
Q Consensus 154 ~~ 155 (505)
+.
T Consensus 196 ~d 197 (253)
T PF10647_consen 196 VD 197 (253)
T ss_pred cc
Confidence 33
No 317
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=88.67 E-value=9.4 Score=34.76 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=59.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
+..|+|-..-++++..... .+.++|...++ ...-+... ++....|||+|+++++...++ .|..+|..+.
T Consensus 69 ql~w~~~~~d~~atas~dk--~ir~wd~r~~k-~~~~i~~~~eni~i~wsp~g~~~~~~~kdD-----~it~id~r~~-- 138 (313)
T KOG1407|consen 69 QLCWDPKHPDLFATASGDK--TIRIWDIRSGK-CTARIETKGENINITWSPDGEYIAVGNKDD-----RITFIDARTY-- 138 (313)
T ss_pred hheeCCCCCcceEEecCCc--eEEEEEeccCc-EEEEeeccCcceEEEEcCCCCEEEEecCcc-----cEEEEEeccc--
Confidence 4567766655555544432 34555665555 33222222 234445999999999887652 6777786541
Q ss_pred ceEEEcCCCCceeeEEEEeC-CEEEEEEecCCeeEEEEE
Q 010654 115 TTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTY 152 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~-d~l~~~~~~~~~~~l~~~ 152 (505)
+.+-+.........+.|.. +.++|..+-.|.-++.-|
T Consensus 139 -~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsy 176 (313)
T KOG1407|consen 139 -KIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSY 176 (313)
T ss_pred -ceeehhcccceeeeeeecCCCCEEEEecCCceEEEEec
Confidence 1122333333345666765 467777766665544444
No 318
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=88.56 E-value=20 Score=32.92 Aligned_cols=135 Identities=14% Similarity=0.170 Sum_probs=74.7
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCC------c-e-eeeeccccc
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE------E-L-RVLTPRVVG 78 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~------~-~-~~l~~~~~~ 78 (505)
.+.+||+-|++ ....++. +.-.-...+|++|.++++..... ..+.|.+.|+.... + . +..++...-
T Consensus 75 t~kLWDv~tGk--~la~~k~--~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ski 150 (327)
T KOG0643|consen 75 TAKLWDVETGK--QLATWKT--NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKI 150 (327)
T ss_pred eeEEEEcCCCc--EEEEeec--CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccce
Confidence 36788887763 3333332 21222567899999988876543 45667777765321 2 2 222333222
Q ss_pred eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 79 VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 79 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
...-|+|-|+.|+.-.. .+.|-.+|+.+ |..-......-...|.+++.++|. .+++..++.... ++++.
T Consensus 151 t~a~Wg~l~~~ii~Ghe-----~G~is~~da~~-g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttak--l~D~~ 220 (327)
T KOG0643|consen 151 TSALWGPLGETIIAGHE-----DGSISIYDART-GKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAK--LVDVR 220 (327)
T ss_pred eeeeecccCCEEEEecC-----CCcEEEEEccc-CceeeechhhhccccccccccCCcceEEecccCccce--eeecc
Confidence 22349999987764432 24677888765 332211111112367888888885 555566665543 45543
No 319
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=88.52 E-value=3.4 Score=40.67 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=71.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--Eeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~ 85 (505)
.+|++|++-.. ..-.+.|-+... =.-++.||.+|+.++ +.+ ....|-+.|+++|+....+..+ ...+ .+.|
T Consensus 237 ~~vklW~vy~~-~~~lrtf~gH~k-~Vrd~~~s~~g~~fL--S~s-fD~~lKlwDtETG~~~~~f~~~--~~~~cvkf~p 309 (503)
T KOG0282|consen 237 GLVKLWNVYDD-RRCLRTFKGHRK-PVRDASFNNCGTSFL--SAS-FDRFLKLWDTETGQVLSRFHLD--KVPTCVKFHP 309 (503)
T ss_pred ceEEEEEEecC-cceehhhhcchh-hhhhhhccccCCeee--eee-cceeeeeeccccceEEEEEecC--CCceeeecCC
Confidence 46888888653 223333332211 112578999999854 222 2345777899999722222211 1222 3889
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~~~~ 155 (505)
|+..+++....+ .+|...|.......+ ...+... .+..+...+++ .++...+++. +.+|+..
T Consensus 310 d~~n~fl~G~sd----~ki~~wDiRs~kvvq-eYd~hLg-~i~~i~F~~~g~rFissSDdks--~riWe~~ 372 (503)
T KOG0282|consen 310 DNQNIFLVGGSD----KKIRQWDIRSGKVVQ-EYDRHLG-AILDITFVDEGRRFISSSDDKS--VRIWENR 372 (503)
T ss_pred CCCcEEEEecCC----CcEEEEeccchHHHH-HHHhhhh-heeeeEEccCCceEeeeccCcc--EEEEEcC
Confidence 997788776543 488888886521111 1112222 35566666654 4444555554 4455443
No 320
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=88.50 E-value=0.88 Score=45.44 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=50.7
Q ss_pred CCCCcEEEEEcCCCCcCCCCCCc-------------h----hHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcch
Q 010654 260 DGSDPLLLYGYGSYEICNDPAFN-------------S----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 322 (505)
Q Consensus 260 ~~~~P~iv~~hGg~~~~~~~~~~-------------~----~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~ 322 (505)
..+.|+|+++-||||.+...... + .-..|.+.+ .++.+|.+-.+||...-.... .......
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a-dLvFiDqPvGTGfS~a~~~e~-~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFA-DLVFIDQPVGTGFSRALGDEK-KKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCC-ceEEEecCcccCccccccccc-ccchhcc
Confidence 35789999999999864322111 0 113566665 455567444444443211111 1111122
Q ss_pred HHHHHHHHH----HHHHcCCCCCCcEEEEeeChHHHHHHHHH
Q 010654 323 FTDFIACAE----YLIKNCYCTKEKLCIEGRSAGGLLIGAVL 360 (505)
Q Consensus 323 ~~D~~~~~~----~l~~~~~~d~~rv~i~G~S~GG~~~~~~~ 360 (505)
-+|+..+.+ ++-+.... -.+..|+|.||||.-+..+|
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~-~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARL-LSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhh-cCceeEeeccccchhhHHHH
Confidence 244444333 33333221 24788999999998665554
No 321
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=88.25 E-value=1.3 Score=42.97 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=50.1
Q ss_pred HHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCC
Q 010654 285 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 364 (505)
Q Consensus 285 ~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p 364 (505)
...|.++|+-|+-+|-- +-|.. .........|+...+++...+.. .+|+.++|+|+|+-+.-.+..+-|
T Consensus 280 ~~~l~~~gvpVvGvdsL------RYfW~---~rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 280 AEALQKQGVPVVGVDSL------RYFWS---ERTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHCCCceeeeehh------hhhhc---cCCHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchhhHHHHHhCC
Confidence 35788899999999842 11110 12223456888888888877643 379999999999988777766655
Q ss_pred Ccee
Q 010654 365 DLFK 368 (505)
Q Consensus 365 ~~~~ 368 (505)
...+
T Consensus 349 ~~~r 352 (456)
T COG3946 349 PATR 352 (456)
T ss_pred HHHH
Confidence 4433
No 322
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=87.83 E-value=1.7 Score=37.65 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.++.+.++-|.... ....++.++|||||+.++..++.+
T Consensus 92 ~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 92 PRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhh
Confidence 44444444444433 345689999999999999988876
No 323
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=87.78 E-value=32 Score=34.51 Aligned_cols=101 Identities=8% Similarity=0.070 Sum_probs=59.0
Q ss_pred CCCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccc--------cceEEEEEeCCCCCceeeeecc
Q 010654 4 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--------ITRFVFYLDVSKPEELRVLTPR 75 (505)
Q Consensus 4 ~~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~--------~~~~l~~~d~~~~~~~~~l~~~ 75 (505)
...|.++-++.+.-+ .++....=..--.+.+.|-+.|++|++....+ .-++||++++.... .+.....
T Consensus 198 ~~kpa~~~i~sIp~~---s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~ 273 (561)
T COG5354 198 LNKPAMVRILSIPKN---SVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDL 273 (561)
T ss_pred CCCCcEEEEEEccCC---CeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccc
Confidence 345667777777522 22222110000124578999999998886442 23789999998554 3333222
Q ss_pred ccc-eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 76 VVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 76 ~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+- .++.|+|+++.+.+.+... + ..+..+++.+
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~--p-a~~s~~~lr~ 307 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYM--P-ASVSVFDLRG 307 (561)
T ss_pred cccceeeeecccCCceeEEeccc--c-cceeeccccc
Confidence 222 2456999999999998331 1 3555566653
No 324
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=87.62 E-value=28 Score=34.89 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=59.9
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+.+.|.| .|++-. .....+++|.++.. +-.+-...+... ..++|||..|++-+.+ +.-.||+++..+...
T Consensus 412 ~~~fhpsg-~va~Gt---~~G~w~V~d~e~~~-lv~~~~d~~~ls~v~ysp~G~~lAvgs~d---~~iyiy~Vs~~g~~y 483 (626)
T KOG2106|consen 412 CADFHPSG-VVAVGT---ATGRWFVLDTETQD-LVTIHTDNEQLSVVRYSPDGAFLAVGSHD---NHIYIYRVSANGRKY 483 (626)
T ss_pred EeeccCcc-eEEEee---ccceEEEEecccce-eEEEEecCCceEEEEEcCCCCEEEEecCC---CeEEEEEECCCCcEE
Confidence 34577888 444432 23457778888754 332222211111 2399999999988754 222444444433211
Q ss_pred ceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 115 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
.+ +.......|..++|+.|.-++..+..+.. +..|
T Consensus 484 ~r--~~k~~gs~ithLDwS~Ds~~~~~~S~d~e-iLyW 518 (626)
T KOG2106|consen 484 SR--VGKCSGSPITHLDWSSDSQFLVSNSGDYE-ILYW 518 (626)
T ss_pred EE--eeeecCceeEEeeecCCCceEEeccCceE-EEEE
Confidence 11 22122257889999999988888876654 4445
No 325
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=87.57 E-value=27 Score=33.43 Aligned_cols=134 Identities=10% Similarity=0.006 Sum_probs=70.0
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEEeeeeC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRG 87 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg 87 (505)
+-|+|++.++. ..-.+.+. .+-.....||-||.+|+- ..-...|.+...+++. ++....+..+=....|.|.+
T Consensus 87 ~AflW~~~~ge-~~~eltgH--KDSVt~~~FshdgtlLAT---GdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a 160 (399)
T KOG0296|consen 87 LAFLWDISTGE-FAGELTGH--KDSVTCCSFSHDGTLLAT---GDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRA 160 (399)
T ss_pred eEEEEEccCCc-ceeEecCC--CCceEEEEEccCceEEEe---cCCCccEEEEEcccCceEEEeecccCceEEEEecccc
Confidence 46899998863 22222222 334557789999988752 2334567777777776 22222222222335588866
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.-|+ ....++ .++...+...+..+..-++......+.+..++++++..+. +| .+.+|++.+
T Consensus 161 ~ill-AG~~DG----svWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~-dg--ti~~Wn~kt 221 (399)
T KOG0296|consen 161 HILL-AGSTDG----SVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYD-DG--TIIVWNPKT 221 (399)
T ss_pred cEEE-eecCCC----cEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEec-Cc--eEEEEecCC
Confidence 4444 333333 4555554432333323333334444555555455444443 44 366777654
No 326
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=87.46 E-value=0.61 Score=46.33 Aligned_cols=55 Identities=20% Similarity=0.156 Sum_probs=36.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--EeeeeCCEEEEEE
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASHRGNHFFITR 94 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~~ 94 (505)
++.+||||++|+..+.+. -|-+.|.++.+ +.-+.+.--|-.. .|||||++|+.-.
T Consensus 295 ~f~FS~DG~~LA~VSqDG---fLRvF~fdt~e-Llg~mkSYFGGLLCvcWSPDGKyIvtGG 351 (636)
T KOG2394|consen 295 EFAFSPDGKYLATVSQDG---FLRIFDFDTQE-LLGVMKSYFGGLLCVCWSPDGKYIVTGG 351 (636)
T ss_pred ceeEcCCCceEEEEecCc---eEEEeeccHHH-HHHHHHhhccceEEEEEcCCccEEEecC
Confidence 467899999998776543 46666777664 5555544433332 3999999776544
No 327
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.45 E-value=1.2 Score=40.52 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..++...+..+.++. ...+|.+.|||+||.++..++..
T Consensus 111 ~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 111 YNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 344555555554441 23689999999999998877664
No 328
>PLN02454 triacylglycerol lipase
Probab=86.89 E-value=1.2 Score=43.89 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..+++.+.++.++++.--..-+|.++|||+||.++..++..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 45677777887776532112259999999999999887753
No 329
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=86.67 E-value=6.5 Score=39.57 Aligned_cols=57 Identities=11% Similarity=0.080 Sum_probs=39.6
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec--cccceeEEeeeeCCEEEEEEcC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVVGVDTAASHRGNHFFITRRS 96 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~~~~ 96 (505)
+.|+|-|++|++..-.....++-+.|+.+.+ ++.. ..+...+.|+|||++|+-.++.
T Consensus 317 ~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K---~i~~~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 317 AFFNPHGNIILLAGFGNLPGDMEVWDVPNRK---LIAKFKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred eEECCCCCEEEEeecCCCCCceEEEeccchh---hccccccCCceEEEEcCCCcEEEEEecc
Confidence 4689999999988765567788888887743 3322 1222334599999988877654
No 330
>PRK02888 nitrous-oxide reductase; Validated
Probab=86.64 E-value=38 Score=35.51 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=18.4
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
.+||||+++|.....+ ..+-++|++.
T Consensus 327 ~vSPDGkylyVanklS----~tVSVIDv~k 352 (635)
T PRK02888 327 NTSPDGKYFIANGKLS----PTVTVIDVRK 352 (635)
T ss_pred EECCCCCEEEEeCCCC----CcEEEEEChh
Confidence 3899999988776432 3677777764
No 331
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=86.31 E-value=18 Score=35.74 Aligned_cols=107 Identities=9% Similarity=0.035 Sum_probs=62.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE--eeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.++|+-||..|+...- ..++-+++..+.. ...+-.+. |..+. |+.+|.+|+=.+ .+ ....+.|.-. +
T Consensus 240 ~L~Wn~~G~~LatG~~---~G~~riw~~~G~l-~~tl~~Hk-gPI~slKWnk~G~yilS~~----vD-~ttilwd~~~-g 308 (524)
T KOG0273|consen 240 SLDWNNDGTLLATGSE---DGEARIWNKDGNL-ISTLGQHK-GPIFSLKWNKKGTYILSGG----VD-GTTILWDAHT-G 308 (524)
T ss_pred eEEecCCCCeEEEeec---CcEEEEEecCchh-hhhhhccC-CceEEEEEcCCCCEEEecc----CC-ccEEEEeccC-c
Confidence 6789999998875433 3456666666654 44444444 33333 888887654222 12 3667777654 3
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+....++...-. -.+++|-.+.-+.+...++. +++|.+..
T Consensus 309 ~~~q~f~~~s~~-~lDVdW~~~~~F~ts~td~~--i~V~kv~~ 348 (524)
T KOG0273|consen 309 TVKQQFEFHSAP-ALDVDWQSNDEFATSSTDGC--IHVCKVGE 348 (524)
T ss_pred eEEEeeeeccCC-ccceEEecCceEeecCCCce--EEEEEecC
Confidence 322244433221 24788988777777666654 56677653
No 332
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=86.24 E-value=22 Score=37.39 Aligned_cols=170 Identities=14% Similarity=0.169 Sum_probs=93.5
Q ss_pred eEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEecccc-ceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
.+-+|.+.|- ....+|.+.. |-| +++++|-|-| |.+.+++ ...||..|-..+ +|.+..+..... +.|.|
T Consensus 474 svRLWsl~t~--s~~V~y~GH~~PVw--dV~F~P~GyY--Fatas~D~tArLWs~d~~~P--lRifaghlsDV~cv~FHP 545 (707)
T KOG0263|consen 474 SVRLWSLDTW--SCLVIYKGHLAPVW--DVQFAPRGYY--FATASHDQTARLWSTDHNKP--LRIFAGHLSDVDCVSFHP 545 (707)
T ss_pred ceeeeecccc--eeEEEecCCCccee--eEEecCCceE--EEecCCCceeeeeecccCCc--hhhhcccccccceEEECC
Confidence 4667788773 4566666432 333 4567899855 3344544 568888887543 455555443344 45888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ 165 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 165 (505)
...+++ +. ..+ ..+-..|+......+ +++.... .+..+..++++.+++..... ..+.+|++.. |..+..+-
T Consensus 546 Ns~Y~a--TG--SsD-~tVRlWDv~~G~~VR-iF~GH~~-~V~al~~Sp~Gr~LaSg~ed-~~I~iWDl~~-~~~v~~l~ 616 (707)
T KOG0263|consen 546 NSNYVA--TG--SSD-RTVRLWDVSTGNSVR-IFTGHKG-PVTALAFSPCGRYLASGDED-GLIKIWDLAN-GSLVKQLK 616 (707)
T ss_pred cccccc--cC--CCC-ceEEEEEcCCCcEEE-EecCCCC-ceEEEEEcCCCceEeecccC-CcEEEEEcCC-Ccchhhhh
Confidence 876543 21 112 233334555422333 6765444 58889999988887765432 3578899874 33333221
Q ss_pred CCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEE
Q 010654 166 GGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVY 205 (505)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 205 (505)
++ .. .+..++++.+|+.+ ...+..+.-.+|
T Consensus 617 -~H----t~---ti~SlsFS~dg~vL--asgg~DnsV~lW 646 (707)
T KOG0263|consen 617 -GH----TG---TIYSLSFSRDGNVL--ASGGADNSVRLW 646 (707)
T ss_pred -cc----cC---ceeEEEEecCCCEE--EecCCCCeEEEE
Confidence 11 11 23335667787733 344444444555
No 333
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.18 E-value=28 Score=33.79 Aligned_cols=67 Identities=24% Similarity=0.149 Sum_probs=48.3
Q ss_pred EEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhhCCC
Q 010654 427 ILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 497 (505)
Q Consensus 427 ~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 497 (505)
.+.+.+..|.++|..+.+++++..+..|+.++-+-+.+.....|.-. .+..+ .....+|+.......
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~--~p~~y--~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS--FPKTY--LKKCSEFLRSVISSY 294 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc--CcHHH--HHHHHHHHHhccccc
Confidence 67777999999999999999999999999888777775434444322 22222 234788998876543
No 334
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.12 E-value=9 Score=34.76 Aligned_cols=133 Identities=11% Similarity=0.071 Sum_probs=73.0
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE--eeeeC
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRG 87 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg 87 (505)
|-+||++.+ ...+..|.|.... ..+++|.+-.++++++++...+-.||..+.... ++.+.... ...|. |||.-
T Consensus 85 Lrl~d~~~~-s~Pi~~~kEH~~E-V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S--v~Tf~gh~-~~Iy~a~~sp~~ 159 (311)
T KOG0277|consen 85 LRLFDLTMP-SKPIHKFKEHKRE-VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS--VQTFNGHN-SCIYQAAFSPHI 159 (311)
T ss_pred EEEeccCCC-CcchhHHHhhhhh-eEEeccccccceeEEeeccCCceEeecCCCCcc--eEeecCCc-cEEEEEecCCCC
Confidence 556665543 4455566554332 236679998888887775555667777665543 44444332 23343 88765
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.-++-....+ ..+-+.|+...|... .+.... ..+...+|++ ..++++...+. -++.|++.
T Consensus 160 ~nlfas~Sgd----~~l~lwdvr~~gk~~-~i~ah~-~Eil~cdw~ky~~~vl~Tg~vd~--~vr~wDir 221 (311)
T KOG0277|consen 160 PNLFASASGD----GTLRLWDVRSPGKFM-SIEAHN-SEILCCDWSKYNHNVLATGGVDN--LVRGWDIR 221 (311)
T ss_pred CCeEEEccCC----ceEEEEEecCCCcee-EEEecc-ceeEeecccccCCcEEEecCCCc--eEEEEehh
Confidence 4444333222 245555665545554 333222 2366777876 35555555544 46677764
No 335
>PLN00181 protein SPA1-RELATED; Provisional
Probab=86.02 E-value=60 Score=35.85 Aligned_cols=134 Identities=8% Similarity=0.052 Sum_probs=72.0
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEe-ee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAA-SH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~-s~ 85 (505)
..|.+||+.+++ ....+.+ .......++|+| ||.+|+..+. ...+.+.|+.++.....+.....-....| ++
T Consensus 555 g~v~lWd~~~~~--~~~~~~~-H~~~V~~l~~~p~~~~~L~Sgs~---Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~ 628 (793)
T PLN00181 555 GVVQVWDVARSQ--LVTEMKE-HEKRVWSIDYSSADPTLLASGSD---DGSVKLWSINQGVSIGTIKTKANICCVQFPSE 628 (793)
T ss_pred CeEEEEECCCCe--EEEEecC-CCCCEEEEEEcCCCCCEEEEEcC---CCEEEEEECCCCcEEEEEecCCCeEEEEEeCC
Confidence 457888987642 2333332 233445778997 7776543322 34577788877652223322211112235 45
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+|..|+.-+.+ ..++.+|+.........+.... ..+..+.|.++..+++...++. +.+|++.
T Consensus 629 ~g~~latgs~d-----g~I~iwD~~~~~~~~~~~~~h~-~~V~~v~f~~~~~lvs~s~D~~--ikiWd~~ 690 (793)
T PLN00181 629 SGRSLAFGSAD-----HKVYYYDLRNPKLPLCTMIGHS-KTVSYVRFVDSSTLVSSSTDNT--LKLWDLS 690 (793)
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCccceEecCCC-CCEEEEEEeCCCEEEEEECCCE--EEEEeCC
Confidence 66666554432 3788888865221211232222 2467788876666666666654 6778875
No 336
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=85.96 E-value=18 Score=35.19 Aligned_cols=116 Identities=11% Similarity=0.010 Sum_probs=67.2
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc---cc---eeE
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV---VG---VDT 81 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~---~~---~~~ 81 (505)
.+|-+||+++. +.++.. +-..-.-++..|+||..|+..+ ....+=++|+.+.. .+...... .+ ...
T Consensus 322 kkvRfwD~Rs~--~~~~sv--~~gg~vtSl~ls~~g~~lLsss---RDdtl~viDlRt~e-I~~~~sA~g~k~asDwtrv 393 (459)
T KOG0288|consen 322 KKVRFWDIRSA--DKTRSV--PLGGRVTSLDLSMDGLELLSSS---RDDTLKVIDLRTKE-IRQTFSAEGFKCASDWTRV 393 (459)
T ss_pred cceEEEeccCC--ceeeEe--ecCcceeeEeeccCCeEEeeec---CCCceeeeeccccc-EEEEeecccccccccccee
Confidence 34888998764 222222 2233444788999999976552 22346677887765 55443222 11 123
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH 136 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~ 136 (505)
.|||||++++--+. .+.||+.++.+..-+..+-....+..|..+.|++.+
T Consensus 394 vfSpd~~YvaAGS~-----dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 394 VFSPDGSYVAAGSA-----DGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG 443 (459)
T ss_pred EECCCCceeeeccC-----CCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence 49999987764332 358999998762222323333444357788887754
No 337
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=85.57 E-value=14 Score=34.75 Aligned_cols=91 Identities=11% Similarity=0.114 Sum_probs=60.1
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
-.+||+|..++ .+.++.-.+.||+.|+..-+ +..+......+.+ .|.|..-+|++.+.. .|||....++
T Consensus 323 ~lafs~Ds~y~-aTrnd~~PnalW~Wdlq~l~-l~avLiQk~piraf~WdP~~prL~vctg~-----srLY~W~psg--- 392 (447)
T KOG4497|consen 323 KLAFSCDSTYA-ATRNDKYPNALWLWDLQNLK-LHAVLIQKHPIRAFEWDPGRPRLVVCTGK-----SRLYFWAPSG--- 392 (447)
T ss_pred eeeecCCceEE-eeecCCCCceEEEEechhhh-hhhhhhhccceeEEEeCCCCceEEEEcCC-----ceEEEEcCCC---
Confidence 46899999885 45677778999999998765 3333222223444 499988888888743 4899888765
Q ss_pred ceEEEcCCCCceeeEEEEeCCE
Q 010654 115 TTVLIPHRESVKLQDIQLFIDH 136 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~d~ 136 (505)
...+--+.+.-.|..+.|..++
T Consensus 393 ~~~V~vP~~GF~i~~l~W~~~g 414 (447)
T KOG4497|consen 393 PRVVGVPKKGFNIQKLQWLQPG 414 (447)
T ss_pred ceEEecCCCCceeeeEEecCCC
Confidence 2322122333457888887653
No 338
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=85.34 E-value=1.4 Score=45.19 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=49.0
Q ss_pred CchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccc-cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHH
Q 010654 281 FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF-LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 359 (505)
Q Consensus 281 ~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~ 359 (505)
|....+.|++.||. --|.+|.+ -+|+.+... ..+..-+..+...|+.+.+.. ..++|.|+||||||.++...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAP---YDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAA---YDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecc---cccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHH
Confidence 35667889999997 45666543 356543221 122344566777777665542 13689999999999999887
Q ss_pred Hhh
Q 010654 360 LNM 362 (505)
Q Consensus 360 ~~~ 362 (505)
+..
T Consensus 231 L~w 233 (642)
T PLN02517 231 MKW 233 (642)
T ss_pred HHh
Confidence 653
No 339
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=85.25 E-value=3.6 Score=39.32 Aligned_cols=143 Identities=10% Similarity=0.072 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCchhhhhhc------cCCCCCCCcccc
Q 010654 323 FTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM------LDPTIPLTTAEW 395 (505)
Q Consensus 323 ~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~~d~~~~~------~~~~~~~~~~~~ 395 (505)
+..+..|++-..+. ..+.-++..|.|.|--|+.+...|...|..++.+-...-++|....+ ++..-|.....|
T Consensus 214 v~a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~py 293 (507)
T COG4287 214 VYAVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPY 293 (507)
T ss_pred HHHHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchh
Confidence 34444555544332 22445789999999999999888887775443332222233221111 111222222222
Q ss_pred cccC---CCCCHHHHHHHHhCChhhcc-----cCCCCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCC
Q 010654 396 EEWG---DPWKEEFYFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 467 (505)
Q Consensus 396 ~~~g---~~~~~~~~~~~~~~sp~~~~-----~~~~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 467 (505)
-+-| .-+.+.....+.-.+|+.+. .++..| -.|+.+..|+..++..+.-++..|.... .+...| +
T Consensus 294 yaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalp-KyivnaSgDdff~pDsa~lYyd~LPG~k---aLrmvP---N 366 (507)
T COG4287 294 YAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALP-KYIVNASGDDFFVPDSANLYYDDLPGEK---ALRMVP---N 366 (507)
T ss_pred HhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhcccc-ceeecccCCcccCCCccceeeccCCCce---eeeeCC---C
Confidence 1111 11334444444556887666 555777 8888899999999999999999887532 234455 7
Q ss_pred CCCCC
Q 010654 468 AGHFS 472 (505)
Q Consensus 468 ~gH~~ 472 (505)
..|..
T Consensus 367 ~~H~~ 371 (507)
T COG4287 367 DPHNL 371 (507)
T ss_pred Ccchh
Confidence 78854
No 340
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=85.20 E-value=25 Score=36.30 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=51.6
Q ss_pred ceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-CCceeeEEEE
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQL 132 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 132 (505)
...+|+.|++++++...+....+-+.. .||.||+-++.. ..+ .+|..+|.....++. ..++. ....=+.+.|
T Consensus 149 ~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llats-cKd----kqirifDPRa~~~pi-Q~te~H~~~rdsRv~w 222 (1012)
T KOG1445|consen 149 HGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATS-CKD----KQIRIFDPRASMEPI-QTTEGHGGMRDSRVLW 222 (1012)
T ss_pred CceEEEEEcccCceeecccCCchhhhccccccCCceEeee-cCC----cceEEeCCccCCCcc-ccccccccchhheeee
Confidence 346899999998744444433333333 399999876644 332 377777865433332 23322 2212235677
Q ss_pred eCC--EEEEE-EecCCeeEEEEEEcC
Q 010654 133 FID--HLAVY-EREGGLQKITTYRLP 155 (505)
Q Consensus 133 ~~d--~l~~~-~~~~~~~~l~~~~~~ 155 (505)
.++ +|+-+ ++.....++.+|+..
T Consensus 223 ~Gn~~rlisTGF~~~R~reV~~~Dtr 248 (1012)
T KOG1445|consen 223 AGNWERLISTGFTTKRIREVRAYDTR 248 (1012)
T ss_pred ccchhhhhhcccchhhheeeeeeecc
Confidence 776 34333 233334456777754
No 341
>PLN02408 phospholipase A1
Probab=85.00 E-value=1.6 Score=42.40 Aligned_cols=39 Identities=18% Similarity=0.036 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
+.+.+.+..++++.--.+.+|.|.|||.||.++..++..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 455566666665432223469999999999998887764
No 342
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=84.52 E-value=75 Score=36.32 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=42.8
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc-----ccc-----------eeEEeeeeCCEEEEEEcCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-----VVG-----------VDTAASHRGNHFFITRRSDEL 99 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~-----~~~-----------~~~~~s~dg~~l~~~~~~~~~ 99 (505)
++.++|++..|++... .+..|+++|..++. ...+... ..+ ....++|||++||+....
T Consensus 687 gVa~dp~~g~LyVad~--~~~~I~v~d~~~g~-v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~--- 760 (1057)
T PLN02919 687 DVCFEPVNEKVYIAMA--GQHQIWEYNISDGV-TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE--- 760 (1057)
T ss_pred EEEEecCCCeEEEEEC--CCCeEEEEECCCCe-EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC---
Confidence 5678887666665532 35568888887775 4332211 000 012388999998887543
Q ss_pred CCceEEEeeCCC
Q 010654 100 FNSELLACPVDN 111 (505)
Q Consensus 100 ~~~~l~~~~~~~ 111 (505)
+.+|.++|+++
T Consensus 761 -n~~Irv~D~~t 771 (1057)
T PLN02919 761 -SSSIRALDLKT 771 (1057)
T ss_pred -CCeEEEEECCC
Confidence 24888888875
No 343
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=84.52 E-value=27 Score=34.13 Aligned_cols=80 Identities=18% Similarity=0.082 Sum_probs=42.7
Q ss_pred EEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeeeeCCE
Q 010654 11 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNH 89 (505)
Q Consensus 11 ~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~ 89 (505)
.+||++|+ .-+.++++ .-.=..+++|||.|-.|+ +.+....-.||-+... .++-++..+.+- ....++|+.++
T Consensus 328 RvWDlRtg--r~im~L~g-H~k~I~~V~fsPNGy~lA-Tgs~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~ 401 (459)
T KOG0272|consen 328 RVWDLRTG--RCIMFLAG-HIKEILSVAFSPNGYHLA-TGSSDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGY 401 (459)
T ss_pred heeecccC--cEEEEecc-cccceeeEeECCCceEEe-ecCCCCcEEEeeeccc--ccceecccccchhhheEecccCCe
Confidence 47899886 45666665 222344788999997654 3333334445544332 222333222211 12347887666
Q ss_pred EEEEEcC
Q 010654 90 FFITRRS 96 (505)
Q Consensus 90 l~~~~~~ 96 (505)
+......
T Consensus 402 fL~Tasy 408 (459)
T KOG0272|consen 402 FLVTASY 408 (459)
T ss_pred EEEEccc
Confidence 6666544
No 344
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=83.79 E-value=20 Score=36.02 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=58.4
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCc-e---eeeeccccceeEEeeeeCCEEEEEEcC--CCCCCceEEEee
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEE-L---RVLTPRVVGVDTAASHRGNHFFITRRS--DELFNSELLACP 108 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~-~---~~l~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~ 108 (505)
..+.+|+||++|+- +.....|-++|+...++ + .-|.....+....||||.+ |++..+. .+.....|+.+|
T Consensus 368 tsi~FS~dg~~LlS---Rg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d 443 (641)
T KOG0772|consen 368 TSISFSYDGNYLLS---RGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFD 443 (641)
T ss_pred eEEEeccccchhhh---ccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCce-EEEecccccCCCCCceEEEEe
Confidence 36789999998752 22233455556655431 1 1112222344456999975 5555443 122335789888
Q ss_pred CCCCCCceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEE
Q 010654 109 VDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 153 (505)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~ 153 (505)
.-++.... -+.-. ...+..+.|-+. .-+++..-+|..++ +|+
T Consensus 444 ~~t~d~v~-ki~i~-~aSvv~~~WhpkLNQi~~gsgdG~~~v-yYd 486 (641)
T KOG0772|consen 444 RMTLDTVY-KIDIS-TASVVRCLWHPKLNQIFAGSGDGTAHV-YYD 486 (641)
T ss_pred ccceeeEE-EecCC-CceEEEEeecchhhheeeecCCCceEE-EEC
Confidence 65533222 22222 445667778775 33444444555544 355
No 345
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=83.42 E-value=21 Score=33.05 Aligned_cols=108 Identities=12% Similarity=0.097 Sum_probs=56.6
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCc--eeeeeccccc-ee-E---Eeee--eCCEEEEEEcCCCCCCceEEEe
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEE--LRVLTPRVVG-VD-T---AASH--RGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~--~~~l~~~~~~-~~-~---~~s~--dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
+.|-|++..++-.. .++|.+++++.+.+ ...+.+...+ .. + .||| ||..++..+.. .|..+
T Consensus 129 vew~Pns~klasm~----dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~------tl~~~ 198 (370)
T KOG1007|consen 129 VEWEPNSDKLASMD----DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDS------TLQFW 198 (370)
T ss_pred EEEcCCCCeeEEec----cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCC------cEEEE
Confidence 46888888876554 45677777776641 1122222211 11 1 2886 67776655432 45556
Q ss_pred eCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 108 PVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|+.+ -...|.+...-...+.+++..++.-.+.++.+.-..+.+|+..
T Consensus 199 D~RT-~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R 245 (370)
T KOG1007|consen 199 DLRT-MKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR 245 (370)
T ss_pred Eccc-hhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence 6653 2233334333333455666777654444443333446778764
No 346
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=83.41 E-value=49 Score=32.62 Aligned_cols=137 Identities=8% Similarity=0.096 Sum_probs=74.9
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccce-eEEeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV-DTAASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~-~~~~s~ 85 (505)
..|.+||+.+++... +++.. ..=.....|.|---.++++.+- ...+-+.|+.... ..+.+.-. ..+ ...|.|
T Consensus 266 ~TV~lWD~~~g~p~~--s~~~~-~k~Vq~l~wh~~~p~~LLsGs~--D~~V~l~D~R~~~~s~~~wk~~-g~VEkv~w~~ 339 (463)
T KOG0270|consen 266 KTVKLWDVDTGKPKS--SITHH-GKKVQTLEWHPYEPSVLLSGSY--DGTVALKDCRDPSNSGKEWKFD-GEVEKVAWDP 339 (463)
T ss_pred ceEEEEEcCCCCcce--ehhhc-CCceeEEEecCCCceEEEeccc--cceEEeeeccCccccCceEEec-cceEEEEecC
Confidence 468899998875433 33211 1112356788887776665432 2335555554211 01111111 111 234888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.....++.+..+ +.||-+|+...+.+-|.+-...+ .|++++.+...-.+.++..+-..+.+++++
T Consensus 340 ~se~~f~~~tdd----G~v~~~D~R~~~~~vwt~~AHd~-~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 340 HSENSFFVSTDD----GTVYYFDIRNPGKPVWTLKAHDD-EISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred CCceeEEEecCC----ceEEeeecCCCCCceeEEEeccC-CcceEEecCCCCcceeeccccceEEEEeec
Confidence 877777777654 48999999877778884443333 488888877533333333333345666665
No 347
>PLN02571 triacylglycerol lipase
Probab=83.34 E-value=2 Score=42.38 Aligned_cols=40 Identities=15% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
.+++.+.++.++++.--..-+|.|+|||+||.+|..+|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4566677776665421112369999999999998887753
No 348
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=83.01 E-value=5.6 Score=35.00 Aligned_cols=69 Identities=22% Similarity=0.184 Sum_probs=38.9
Q ss_pred CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHH-HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh---CCCc
Q 010654 291 RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RPDL 366 (505)
Q Consensus 291 ~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~---~p~~ 366 (505)
..+.|+.++.+|.+... .....++++... ++.+.+. ....++.++|||+||.++..++.+ .++.
T Consensus 24 ~~~~v~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 24 GRRDVSALPLPGFGPGE----------PLPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred CCccEEEecCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 35789999988765311 111223333332 2223322 123568899999999998777664 2334
Q ss_pred eeEEE
Q 010654 367 FKAAV 371 (505)
Q Consensus 367 ~~a~v 371 (505)
....+
T Consensus 92 ~~~l~ 96 (212)
T smart00824 92 PAAVV 96 (212)
T ss_pred CcEEE
Confidence 44444
No 349
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=82.79 E-value=92 Score=35.66 Aligned_cols=111 Identities=17% Similarity=0.171 Sum_probs=59.7
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc-------------cc----------eeEEeeeeCCEEEE
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-------------VG----------VDTAASHRGNHFFI 92 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~-------------~~----------~~~~~s~dg~~l~~ 92 (505)
+++++|||++|++... .++.|+++|++++. .+.+.... ++ ....++++|+ +|+
T Consensus 744 GIavspdG~~LYVADs--~n~~Irv~D~~tg~-~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYV 819 (1057)
T PLN02919 744 GISLSPDLKELYIADS--ESSSIRALDLKTGG-SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYV 819 (1057)
T ss_pred EEEEeCCCCEEEEEEC--CCCeEEEEECCCCc-EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEE
Confidence 4689999998776533 35679999988765 33322100 01 0112677775 544
Q ss_pred EEcCCCCCCceEEEeeCCCCCCceEEEcCC------------CCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 93 TRRSDELFNSELLACPVDNTSETTVLIPHR------------ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.. . .+.+|.++|.++ +....+.... ......++..++++-++++.. +..++.++++.+
T Consensus 820 AD-s---~N~rIrviD~~t-g~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt-~Nn~Irvid~~~ 889 (1057)
T PLN02919 820 AD-S---YNHKIKKLDPAT-KRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADT-NNSLIRYLDLNK 889 (1057)
T ss_pred EE-C---CCCEEEEEECCC-CeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEEC-CCCEEEEEECCC
Confidence 43 2 235888888765 3222122110 011345677776644444332 234577888764
No 350
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=82.38 E-value=55 Score=32.47 Aligned_cols=162 Identities=11% Similarity=0.067 Sum_probs=84.7
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.+++++|||+.+++......++.++++|..++.....+..........++|+|+.+|..... ...|..++..+ .
T Consensus 119 ~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~----~~~v~vi~~~~--~ 192 (381)
T COG3391 119 VGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSD----DNTVSVIDTSG--N 192 (381)
T ss_pred ceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecC----CCeEEEEeCCC--c
Confidence 35789999999877654435778999999887622222222212223499999998888732 24888888654 2
Q ss_pred ceEEE----cCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeecCCCCcccC
Q 010654 115 TTVLI----PHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSS 188 (505)
Q Consensus 115 ~~~~~----~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (505)
..+.- .-........+.++.+ .+++....+....+..++... ...... ..+...........+|++
T Consensus 193 ~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~--~~v~~~------~~~~~~~~~~~v~~~p~g 264 (381)
T COG3391 193 SVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT--GNVTAT------DLPVGSGAPRGVAVDPAG 264 (381)
T ss_pred ceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCC--ceEEEe------ccccccCCCCceeECCCC
Confidence 11110 0111112234555555 344443333223455555442 211110 011111001123456778
Q ss_pred CEEEEEEecCCCCceEEEEECCCCc
Q 010654 189 RILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 189 ~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
..+++..+. ...++.++..+..
T Consensus 265 ~~~yv~~~~---~~~V~vid~~~~~ 286 (381)
T COG3391 265 KAAYVANSQ---GGTVSVIDGATDR 286 (381)
T ss_pred CEEEEEecC---CCeEEEEeCCCCc
Confidence 866555443 6677888866554
No 351
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=82.26 E-value=4.8 Score=42.45 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=48.6
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGN 88 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~ 88 (505)
.|.++|..|. .-.+.|.+. .+-.-+..+|||||+|+..+.. +.|.+.|+-++.....+.-........+||.|.
T Consensus 557 ~I~vvD~~t~--kvvR~f~gh-~nritd~~FS~DgrWlisasmD---~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD 630 (910)
T KOG1539|consen 557 SIRVVDVVTR--KVVREFWGH-GNRITDMTFSPDGRWLISASMD---STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGD 630 (910)
T ss_pred eEEEEEchhh--hhhHHhhcc-ccceeeeEeCCCCcEEEEeecC---CcEEEEeccCcceeeeEecCCcceeeEECCCCC
Confidence 4667777663 233334322 1223367899999999876553 347788888876222222222223345899998
Q ss_pred EEEEEEcC
Q 010654 89 HFFITRRS 96 (505)
Q Consensus 89 ~l~~~~~~ 96 (505)
.|+-....
T Consensus 631 ~LAT~Hvd 638 (910)
T KOG1539|consen 631 FLATVHVD 638 (910)
T ss_pred EEEEEEec
Confidence 88776643
No 352
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=82.18 E-value=40 Score=30.71 Aligned_cols=137 Identities=9% Similarity=0.125 Sum_probs=73.6
Q ss_pred CceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeee
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH 85 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~ 85 (505)
+.+|-+||+.+........|+..... ...+.+.-|||+++ +.+....-.|| |+.... ..++......+. .-..|
T Consensus 60 ~qhvRlyD~~S~np~Pv~t~e~h~kN-VtaVgF~~dgrWMy-TgseDgt~kIW--dlR~~~-~qR~~~~~spVn~vvlhp 134 (311)
T KOG0315|consen 60 NQHVRLYDLNSNNPNPVATFEGHTKN-VTAVGFQCDGRWMY-TGSEDGTVKIW--DLRSLS-CQRNYQHNSPVNTVVLHP 134 (311)
T ss_pred CCeeEEEEccCCCCCceeEEeccCCc-eEEEEEeecCeEEE-ecCCCceEEEE--eccCcc-cchhccCCCCcceEEecC
Confidence 56788999988755566667654322 22445678999864 33333333444 444443 333332221211 22455
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEE-EecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~-~~~~~~~~l~~~~~~~ 156 (505)
.-..|+ ..+. .+++.+.|+.+-.-.. .+.+..+..+.++....|+-.++ .+.. ...+++++-.
T Consensus 135 nQteLi-s~dq----sg~irvWDl~~~~c~~-~liPe~~~~i~sl~v~~dgsml~a~nnk--G~cyvW~l~~ 198 (311)
T KOG0315|consen 135 NQTELI-SGDQ----SGNIRVWDLGENSCTH-ELIPEDDTSIQSLTVMPDGSMLAAANNK--GNCYVWRLLN 198 (311)
T ss_pred CcceEE-eecC----CCcEEEEEccCCcccc-ccCCCCCcceeeEEEcCCCcEEEEecCC--ccEEEEEccC
Confidence 544444 3322 2478888886511122 33344456788888877754444 3433 4567888753
No 353
>PLN02324 triacylglycerol lipase
Probab=81.94 E-value=2.4 Score=41.73 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
..+.+.+.+..|+++.--..-+|.|+|||.||.++..+|.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3455666677776652211237999999999999888775
No 354
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=81.94 E-value=5.6 Score=43.11 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=57.5
Q ss_pred EEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCc
Q 010654 24 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNS 102 (505)
Q Consensus 24 ~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~ 102 (505)
.++.+.+.+ ..++.||||+++++-.+ ..+.+.+.|..+.+..+.+-.+..-+ -..|.|-|++|+-.+++.
T Consensus 123 ~~l~~H~~D-V~Dv~Wsp~~~~lvS~s---~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr----- 193 (942)
T KOG0973|consen 123 SILRGHDSD-VLDVNWSPDDSLLVSVS---LDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR----- 193 (942)
T ss_pred EEEecCCCc-cceeccCCCccEEEEec---ccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCc-----
Confidence 455554332 34789999999875332 23457777777654233333222111 135999999888776541
Q ss_pred eEEEeeCCCCCCceEEEcCCCC-----ceeeEEEEeCCEEEEEE
Q 010654 103 ELLACPVDNTSETTVLIPHRES-----VKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~d~l~~~~ 141 (505)
.|.+....+.+... .++..++ ..+..++|++|+-+++.
T Consensus 194 tikvwrt~dw~i~k-~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973|consen 194 TLKVWRTSDWGIEK-SITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred eEEEEEcccceeeE-eeccchhhCCCcceeeecccCCCcCeecc
Confidence 23333322222222 3333322 23456788888655543
No 355
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=81.57 E-value=98 Score=34.87 Aligned_cols=60 Identities=10% Similarity=0.079 Sum_probs=39.4
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcC
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRS 96 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~ 96 (505)
..+++..--|+..|++... ..++.++|.++.. +..+..-..|+.. +||||++.+++.+..
T Consensus 70 ~i~s~~fl~d~~~i~v~~~---~G~iilvd~et~~-~eivg~vd~GI~aaswS~Dee~l~liT~~ 130 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITA---LGDIILVDPETLE-LEIVGNVDNGISAASWSPDEELLALITGR 130 (1265)
T ss_pred ceEEEEEecccceEEEEec---CCcEEEEcccccc-eeeeeeccCceEEEeecCCCcEEEEEeCC
Confidence 3344455555555554433 2357777887775 6666666667664 499999999999875
No 356
>PLN02802 triacylglycerol lipase
Probab=80.94 E-value=2.7 Score=42.41 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 323 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
-+++.+.+..+++...-..-+|.|+|||+||.++..++..
T Consensus 311 reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 311 SESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3556666666665422112479999999999998877653
No 357
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=80.84 E-value=3.1 Score=36.21 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=39.2
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHh
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS-KSGRFERLREAAFTYTFLMRA 493 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~~fl~~~ 493 (505)
++|-|-|+.|+++.+.|+....+... |.+......-..++.||.+ ..+..-+.+-+-.+.+|+.++
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~--glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCT--GLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhc--CCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 49999999999999999876544322 2232222233334899954 333322233345577787653
No 358
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=80.51 E-value=12 Score=28.20 Aligned_cols=54 Identities=9% Similarity=0.106 Sum_probs=33.4
Q ss_pred CCCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCC
Q 010654 5 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 64 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~ 64 (505)
...-+|+.||..|+ +.+.+.++ -.|--+++.|||+++|++.-.. ..+|..+-++
T Consensus 34 ~~~GRll~ydp~t~--~~~vl~~~--L~fpNGVals~d~~~vlv~Et~--~~Ri~rywl~ 87 (89)
T PF03088_consen 34 RPTGRLLRYDPSTK--ETTVLLDG--LYFPNGVALSPDESFVLVAETG--RYRILRYWLK 87 (89)
T ss_dssp ---EEEEEEETTTT--EEEEEEEE--ESSEEEEEE-TTSSEEEEEEGG--GTEEEEEESS
T ss_pred CCCcCEEEEECCCC--eEEEehhC--CCccCeEEEcCCCCEEEEEecc--CceEEEEEEe
Confidence 34568999999885 34455543 3355588999999999887543 3445555444
No 359
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=80.24 E-value=44 Score=32.21 Aligned_cols=129 Identities=12% Similarity=0.074 Sum_probs=65.9
Q ss_pred CcEEEEEecc--ccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcC----CCCCC-ceEEEeeCCCCC-C
Q 010654 43 KKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS----DELFN-SELLACPVDNTS-E 114 (505)
Q Consensus 43 g~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~----~~~~~-~~l~~~~~~~~~-~ 114 (505)
-+++++.-.. +-.+++|++|.++++ ..=..+..-......||||+.+|..+.- ..+.. .-|-.+|..+.. .
T Consensus 2 ~~rvyV~D~~~~~~~~rv~viD~d~~k-~lGmi~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~ 80 (342)
T PF06433_consen 2 AHRVYVQDPVFFHMTSRVYVIDADSGK-LLGMIDTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPT 80 (342)
T ss_dssp TTEEEEEE-GGGGSSEEEEEEETTTTE-EEEEEEEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred CcEEEEECCccccccceEEEEECCCCc-EEEEeecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCccc
Confidence 3455555332 234689999999875 3222221111123489999999876542 11122 345567776632 1
Q ss_pred ceEEEcCCCCc----eeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeee
Q 010654 115 TTVLIPHRESV----KLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 179 (505)
Q Consensus 115 ~~~~~~~~~~~----~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (505)
.+..++..... ....+..+.| +.+++.+..-...+.++|+.. ++.+ .++..|+|...+
T Consensus 81 ~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~-~kvv------~ei~~PGC~~iy 143 (342)
T PF06433_consen 81 GEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAA-KKVV------GEIDTPGCWLIY 143 (342)
T ss_dssp EEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTT-TEEE------EEEEGTSEEEEE
T ss_pred ceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCC-Ccee------eeecCCCEEEEE
Confidence 12255543111 1123455544 455566666566788898863 2211 456777776543
No 360
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=80.21 E-value=51 Score=30.74 Aligned_cols=152 Identities=8% Similarity=0.016 Sum_probs=0.0
Q ss_pred CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE-eeeeCCEEEEEEcCCCC
Q 010654 21 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDEL 99 (505)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~~~~ 99 (505)
..++++.+...-.+ ...|++|+|+|+ +......|.+.|.-+..+...+.-....+-.. ++|.|+.++--.-+
T Consensus 46 ~~rr~LkGH~~Ki~-~~~ws~Dsr~iv---SaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLd--- 118 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIY-AMDWSTDSRRIV---SASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLD--- 118 (343)
T ss_pred eeEEEeccccccee-eeEecCCcCeEE---eeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcC---
Q ss_pred CCceEEEeeCC--CCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCC
Q 010654 100 FNSELLACPVD--NTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDP 175 (505)
Q Consensus 100 ~~~~l~~~~~~--~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (505)
+.--+|.+... + +..+. .++..... ++.....+|.-+++..-+ ..-.+|++++ |. ....|.+.
T Consensus 119 N~Csiy~ls~~d~~-g~~~v~r~l~gHtgy-lScC~f~dD~~ilT~SGD--~TCalWDie~-g~--------~~~~f~GH 185 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAE-GNVRVSRELAGHTGY-LSCCRFLDDNHILTGSGD--MTCALWDIET-GQ--------QTQVFHGH 185 (343)
T ss_pred ceeEEEeccccccc-ccceeeeeecCccce-eEEEEEcCCCceEecCCC--ceEEEEEccc-ce--------EEEEecCC
Q ss_pred eeeecCCCCcc-cCCEEE
Q 010654 176 VYSIDPSESVF-SSRILR 192 (505)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~ 192 (505)
..++-+++++| ++++++
T Consensus 186 ~gDV~slsl~p~~~ntFv 203 (343)
T KOG0286|consen 186 TGDVMSLSLSPSDGNTFV 203 (343)
T ss_pred cccEEEEecCCCCCCeEE
No 361
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=79.96 E-value=78 Score=34.33 Aligned_cols=104 Identities=16% Similarity=0.087 Sum_probs=55.0
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEE-ecCCeeEEEEEEcCCCCCc
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE-REGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~-~~~~~~~l~~~~~~~~~~~ 160 (505)
.++.+|+++++-+++ ..+.++++.+.+... ....-+..+..++.++++.+++. .-+| .+.+|+++. +..
T Consensus 103 ~v~g~g~~iaagsdD-----~~vK~~~~~D~s~~~--~lrgh~apVl~l~~~p~~~fLAvss~dG--~v~iw~~~~-~~~ 172 (933)
T KOG1274|consen 103 AVSGSGKMIAAGSDD-----TAVKLLNLDDSSQEK--VLRGHDAPVLQLSYDPKGNFLAVSSCDG--KVQIWDLQD-GIL 172 (933)
T ss_pred EEecCCcEEEeecCc-----eeEEEEeccccchhe--eecccCCceeeeeEcCCCCEEEEEecCc--eEEEEEccc-chh
Confidence 378888888776643 466777766533333 23333455778888887655543 4455 577888863 321
Q ss_pred ccccCCC-ceeeccCCeeeecCCCCcccCCEEEEEEe
Q 010654 161 LKSLQGG-KSVEFIDPVYSIDPSESVFSSRILRFHYS 196 (505)
Q Consensus 161 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (505)
...|+.- +...+.. .-.+.-+.|+|+++.+++...
T Consensus 173 ~~tl~~v~k~n~~~~-s~i~~~~aW~Pk~g~la~~~~ 208 (933)
T KOG1274|consen 173 SKTLTGVDKDNEFIL-SRICTRLAWHPKGGTLAVPPV 208 (933)
T ss_pred hhhcccCCccccccc-cceeeeeeecCCCCeEEeecc
Confidence 2222110 0001100 001122567888887776544
No 362
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=79.51 E-value=21 Score=38.89 Aligned_cols=65 Identities=15% Similarity=0.199 Sum_probs=42.2
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCCCceEE-EcCCCCceeeEEEEeCC--EEEE-EEecC--CeeEEEEEEcCCCCC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTSETTVL-IPHRESVKLQDIQLFID--HLAV-YEREG--GLQKITTYRLPAVGE 159 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~d--~l~~-~~~~~--~~~~l~~~~~~~~~~ 159 (505)
.+|+|+.... .+|.++|.++ ...+.+ +.. ...+-..+|++| .+.| +..+. +.+.+++.+|.+++.
T Consensus 319 tkiAfv~~~~----~~L~~~D~dG-~n~~~ve~~~--~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~ 389 (912)
T TIGR02171 319 AKLAFRNDVT----GNLAYIDYTK-GASRAVEIED--TISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGS 389 (912)
T ss_pred eeEEEEEcCC----CeEEEEecCC-CCceEEEecC--CCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCC
Confidence 4688887542 2899999886 445523 333 223556677776 5666 44555 688899999987654
No 363
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.74 E-value=4.2 Score=37.03 Aligned_cols=25 Identities=28% Similarity=0.383 Sum_probs=21.3
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCc
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDL 366 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~ 366 (505)
.+++|.|-||||.++..+...++..
T Consensus 195 g~~~~~g~Smgg~~a~~vgS~~q~P 219 (371)
T KOG1551|consen 195 GNLNLVGRSMGGDIANQVGSLHQKP 219 (371)
T ss_pred ccceeeeeecccHHHHhhcccCCCC
Confidence 5799999999999999998866544
No 364
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=78.67 E-value=18 Score=33.31 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=63.6
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
..|.||.++|+.+.+.. ..|+.+++++ ...+ .++-......++++..++..+++..+ ...++++++++..+..
T Consensus 27 LTy~pd~~tLfaV~d~~----~~i~els~~G-~vlr-~i~l~g~~D~EgI~y~g~~~~vl~~E-r~~~L~~~~~~~~~~~ 99 (248)
T PF06977_consen 27 LTYNPDTGTLFAVQDEP----GEIYELSLDG-KVLR-RIPLDGFGDYEGITYLGNGRYVLSEE-RDQRLYIFTIDDDTTS 99 (248)
T ss_dssp EEEETTTTEEEEEETTT----TEEEEEETT---EEE-EEE-SS-SSEEEEEE-STTEEEEEET-TTTEEEEEEE----TT
T ss_pred cEEcCCCCeEEEEECCC----CEEEEEcCCC-CEEE-EEeCCCCCCceeEEEECCCEEEEEEc-CCCcEEEEEEeccccc
Confidence 34889999999998762 4899999864 2222 33333344678999988766655543 2346777877543322
Q ss_pred ccccCCCceee--ccC-CeeeecCCCCcccCCEEEEEEecCCCCceEEEEEC
Q 010654 161 LKSLQGGKSVE--FID-PVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 209 (505)
Q Consensus 161 ~~~l~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 209 (505)
+.. ..-..++ ++. ....+.++++++.++.+++... ..|..+|.++.
T Consensus 100 ~~~-~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE--~~P~~l~~~~~ 148 (248)
T PF06977_consen 100 LDR-ADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKE--RKPKRLYEVNG 148 (248)
T ss_dssp --E-EEEEEEE---S---SS--EEEEEETTTTEEEEEEE--SSSEEEEEEES
T ss_pred cch-hhceEEecccccCCCcceEEEEEcCCCCEEEEEeC--CCChhhEEEcc
Confidence 110 0001122 221 1111334566777777777654 46778888875
No 365
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=78.44 E-value=11 Score=35.27 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=12.5
Q ss_pred eEEEEEEeCCCcEEEEEe
Q 010654 33 YSLGLQASESKKFLFIAS 50 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~ 50 (505)
|.-.+.+++||.+|+-.+
T Consensus 350 yvn~a~ft~dG~~iisaS 367 (508)
T KOG0275|consen 350 YVNEATFTDDGHHIISAS 367 (508)
T ss_pred cccceEEcCCCCeEEEec
Confidence 334677899999876544
No 366
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=78.30 E-value=72 Score=31.60 Aligned_cols=115 Identities=10% Similarity=0.106 Sum_probs=61.6
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee------eeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEee
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV------LTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACP 108 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~------l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 108 (505)
.+...+|||.++++.. ...+.|.++|.++.. ... +.....-....+++||+.+|..-.... ...+..++
T Consensus 163 ~~~a~~p~g~~vyv~~--~~~~~v~vi~~~~~~-v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~--~~~v~~id 237 (381)
T COG3391 163 TGVAVDPDGNKVYVTN--SDDNTVSVIDTSGNS-VVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG--SNNVLKID 237 (381)
T ss_pred ceEEECCCCCeEEEEe--cCCCeEEEEeCCCcc-eeccccccccccCCCCceEEECCCCCEEEEEeccCC--CceEEEEe
Confidence 5678899999877654 456789999977654 332 111110112348999998887765422 35788888
Q ss_pred CCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 109 VDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
........+....... ....+...+++.+++........+.+.+..
T Consensus 238 ~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~ 283 (381)
T COG3391 238 TATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGA 283 (381)
T ss_pred CCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCC
Confidence 7652222221222221 223344455543333333333445555543
No 367
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=78.07 E-value=17 Score=34.36 Aligned_cols=119 Identities=14% Similarity=0.109 Sum_probs=68.2
Q ss_pred CCCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcCCCC--CCc----------hhHHHHHHCCcEEEEEcccCCCCCch
Q 010654 241 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFN----------SSRLSLLDRGFIFAIAQIRGGGELGR 308 (505)
Q Consensus 241 ~dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~~~~--~~~----------~~~~~l~~~G~~v~~~d~rG~~~~g~ 308 (505)
+++.....||++-... ....+|+.+++.|||+++..- .|. +....|.+.--.+++=|+-|+|-+--
T Consensus 11 r~~a~~F~wly~~~~~--~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyV 88 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATAN--VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYV 88 (414)
T ss_pred ecCceEEEEEeeeccc--cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeee
Confidence 4566777787776543 225689999999999865331 111 11124555433444444455542211
Q ss_pred hHHHcccccCCcchHHHHHHHHHHHHH-cCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 309 QWYENGKFLKKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 309 ~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
+-. ..+.........|+...++-+.. ++......+.|+-.||||-|+...+..
T Consensus 89 dg~-~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 89 DGS-SAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred cCc-ccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 100 11112222445677776665443 455666789999999999998877644
No 368
>PLN00413 triacylglycerol lipase
Probab=77.86 E-value=4.3 Score=40.63 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
.+..+...++.++++. ...+|.|+|||.||.+|..++.
T Consensus 266 ayy~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3445666666665542 2358999999999999888775
No 369
>PRK13613 lipoprotein LpqB; Provisional
Probab=76.57 E-value=1.1e+02 Score=32.46 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=58.9
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCc----eeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEE----LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+++.|+||+.+++... +...||+-.+..+.+ .+.+.....-...+|+.+| ++|.. +. +....++.++--.+
T Consensus 367 s~avS~~g~~~A~v~~--~~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g-~vWtv-d~-~~~~~~vl~v~~~~ 441 (599)
T PRK13613 367 RVAVSRDESRAAGISA--DGDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRG-DLWVV-DR-DPADPRLLWLLQGD 441 (599)
T ss_pred ceEEcCCCceEEEEcC--CCcEEEEeccCCCCccccccceeeccCcccCCcCcCCC-CEEEe-cC-CCCCceEEEEEcCC
Confidence 6789999999888743 345777766644432 1222222211223488887 55544 22 11222433332122
Q ss_pred CCCceEEEcCCC-CceeeEEEEeCC--EEEEEEecCCeeEEEEEEc
Q 010654 112 TSETTVLIPHRE-SVKLQDIQLFID--HLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 112 ~~~~~~~~~~~~-~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~ 154 (505)
++..-+-.... ...|..+..+.| ++.++...++..++++--+
T Consensus 442 -G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V 486 (599)
T PRK13613 442 -GEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRI 486 (599)
T ss_pred -CcEEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEE
Confidence 32221111121 236888888888 5666666666666665544
No 370
>PLN02753 triacylglycerol lipase
Probab=76.41 E-value=4.4 Score=41.09 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHcCCCC---CCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCYCT---KEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d---~~rv~i~G~S~GG~~~~~~~~ 361 (505)
..+.+.+.++.|+++.-.+ .-+|.|+|||.||.+|..+|.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4566677777776642211 358999999999999888764
No 371
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.31 E-value=42 Score=31.46 Aligned_cols=119 Identities=8% Similarity=0.047 Sum_probs=72.0
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
..|+||.+.|+-+++.. .+|+-++.++ .--+ .++-+.....+.+.+.++..+.+..+.. .+++++.++.++..
T Consensus 91 LTynp~~rtLFav~n~p----~~iVElt~~G-dlir-tiPL~g~~DpE~Ieyig~n~fvi~dER~-~~l~~~~vd~~t~~ 163 (316)
T COG3204 91 LTYNPDTRTLFAVTNKP----AAIVELTKEG-DLIR-TIPLTGFSDPETIEYIGGNQFVIVDERD-RALYLFTVDADTTV 163 (316)
T ss_pred eeeCCCcceEEEecCCC----ceEEEEecCC-ceEE-EecccccCChhHeEEecCCEEEEEehhc-ceEEEEEEcCCccE
Confidence 34999999999888762 4888888775 2222 4555555567888999988777766543 45777777654432
Q ss_pred ccccCCCceeeccCC---eeeecCCCCcccCCEEEEEEecCCCCceEEEEECC
Q 010654 161 LKSLQGGKSVEFIDP---VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
+. +. ...+++... +--+.+..+++....++|.- -..|-.||.++..
T Consensus 164 ~~-~~-~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aK--Er~P~~I~~~~~~ 212 (316)
T COG3204 164 IS-AK-VQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAK--ERNPIGIFEVTQS 212 (316)
T ss_pred Ee-cc-ceEEeccccCCCCcCceeeecCCCCceEEEEE--ccCCcEEEEEecC
Confidence 11 10 012222111 11134566777777665544 4678889988743
No 372
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=76.02 E-value=70 Score=30.03 Aligned_cols=132 Identities=10% Similarity=0.040 Sum_probs=69.2
Q ss_pred cCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee--EEeeeeCCEEEEEEcCCCCCCceEEE
Q 010654 29 KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLA 106 (505)
Q Consensus 29 ~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~ 106 (505)
++.+-...+++||.-..++...+....-++|-+.-++.-..+...... +.. ..||.||..++.-..+ .++-+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~-~PvL~v~WsddgskVf~g~~D-----k~~k~ 98 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHD-GPVLDVCWSDDGSKVFSGGCD-----KQAKL 98 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccC-CCeEEEEEccCCceEEeeccC-----CceEE
Confidence 344555578899955554433333345577777655221222222222 322 3499999766554433 26777
Q ss_pred eeCCCCCCceEEEcCCCCceeeEEEEeCCEE---EEEEecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeee
Q 010654 107 CPVDNTSETTVLIPHRESVKLQDIQLFIDHL---AVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS 178 (505)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l---~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 178 (505)
.|+++ +... .+... +..+..+.|.+... +.+..-+. .|..||... .+++ ..+.+|+..|.
T Consensus 99 wDL~S-~Q~~-~v~~H-d~pvkt~~wv~~~~~~cl~TGSWDK--TlKfWD~R~----~~pv---~t~~LPeRvYa 161 (347)
T KOG0647|consen 99 WDLAS-GQVS-QVAAH-DAPVKTCHWVPGMNYQCLVTGSWDK--TLKFWDTRS----SNPV---ATLQLPERVYA 161 (347)
T ss_pred EEccC-CCee-eeeec-ccceeEEEEecCCCcceeEeccccc--ceeecccCC----CCee---eeeeccceeee
Confidence 79887 4444 34433 33467788887643 22222221 366676542 1111 34667776554
No 373
>PLN02761 lipase class 3 family protein
Probab=75.68 E-value=4.7 Score=40.83 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHcCC---CCC-CcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCY---CTK-EKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~---~d~-~rv~i~G~S~GG~~~~~~~~ 361 (505)
.-+++.+.++.|++... -++ -+|.|.|||+||.++..++.
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34566777777766421 123 38999999999999887764
No 374
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=75.60 E-value=54 Score=30.70 Aligned_cols=108 Identities=9% Similarity=0.107 Sum_probs=56.6
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccce--eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
-..++|||..++- ......|++.++.+-. ..-.+..+. +. ...|..|++.|+=.+.+ .+++..|.++
T Consensus 52 ~~~F~P~gs~~aS---gG~Dr~I~LWnv~gdceN~~~lkgHs-gAVM~l~~~~d~s~i~S~gtD-----k~v~~wD~~t- 121 (338)
T KOG0265|consen 52 TIKFHPDGSCFAS---GGSDRAIVLWNVYGDCENFWVLKGHS-GAVMELHGMRDGSHILSCGTD-----KTVRGWDAET- 121 (338)
T ss_pred EEEECCCCCeEee---cCCcceEEEEeccccccceeeecccc-ceeEeeeeccCCCEEEEecCC-----ceEEEEeccc-
Confidence 3578999987642 2223456666654432 122233222 32 34589999887755543 4899999886
Q ss_pred CCceEEEcCCCCceeeEEEEeCCE--EEEEEecCCeeEEEEEEcCC
Q 010654 113 SETTVLIPHRESVKLQDIQLFIDH--LAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~d~--l~~~~~~~~~~~l~~~~~~~ 156 (505)
|....-...+.. .+..+....-+ ++.....++ ++.+||+..
T Consensus 122 G~~~rk~k~h~~-~vNs~~p~rrg~~lv~SgsdD~--t~kl~D~R~ 164 (338)
T KOG0265|consen 122 GKRIRKHKGHTS-FVNSLDPSRRGPQLVCSGSDDG--TLKLWDIRK 164 (338)
T ss_pred ceeeehhccccc-eeeecCccccCCeEEEecCCCc--eEEEEeecc
Confidence 432211222222 23444444433 333334443 577788763
No 375
>PRK02888 nitrous-oxide reductase; Validated
Probab=75.19 E-value=24 Score=36.95 Aligned_cols=149 Identities=12% Similarity=0.024 Sum_probs=71.0
Q ss_pred EeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE
Q 010654 39 ASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 117 (505)
Q Consensus 39 ~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 117 (505)
++|||+.+... +...+-+-.+|.++.+ .++.+.... -....+++||+++++...... ....+..++..+ ..|
T Consensus 200 lpnDGk~l~~~--~ey~~~vSvID~etmeV~~qV~Vdgn-pd~v~~spdGk~afvTsyNsE-~G~tl~em~a~e---~d~ 272 (635)
T PRK02888 200 LPNDGKDLDDP--KKYRSLFTAVDAETMEVAWQVMVDGN-LDNVDTDYDGKYAFSTCYNSE-EGVTLAEMMAAE---RDW 272 (635)
T ss_pred cCCCCCEeecc--cceeEEEEEEECccceEEEEEEeCCC-cccceECCCCCEEEEeccCcc-cCcceeeecccc---Cce
Confidence 57888865322 3456677788998765 233333221 112348999999888863211 123455555433 223
Q ss_pred EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCC---CCcccccCCCceeeccCCeeeecCCCCcccCCEEEEE
Q 010654 118 LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAV---GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFH 194 (505)
Q Consensus 118 ~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (505)
++.-.+.. +..+.-.++..++ . ..++.+++..++ +..+. ..+..+. ..++++.+||++.++++
T Consensus 273 ~vvfni~~-iea~vkdGK~~~V--~---gn~V~VID~~t~~~~~~~v~-----~yIPVGK---sPHGV~vSPDGkylyVa 338 (635)
T PRK02888 273 VVVFNIAR-IEEAVKAGKFKTI--G---GSKVPVVDGRKAANAGSALT-----RYVPVPK---NPHGVNTSPDGKYFIAN 338 (635)
T ss_pred EEEEchHH-HHHhhhCCCEEEE--C---CCEEEEEECCccccCCcceE-----EEEECCC---CccceEECCCCCEEEEe
Confidence 33322221 1122122333332 1 234666765431 11111 1122222 13456788999966544
Q ss_pred EecCCCCceEEEEECCC
Q 010654 195 YSSLRTPPSVYDYDMDM 211 (505)
Q Consensus 195 ~~~~~~p~~~~~~~~~~ 211 (505)
.- ..+.+-.+|.++
T Consensus 339 nk---lS~tVSVIDv~k 352 (635)
T PRK02888 339 GK---LSPTVTVIDVRK 352 (635)
T ss_pred CC---CCCcEEEEEChh
Confidence 32 233455666654
No 376
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=74.93 E-value=64 Score=29.03 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=57.7
Q ss_pred eCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEE
Q 010654 40 SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 119 (505)
Q Consensus 40 SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 119 (505)
.+++..+++. .....|+.+|+++|+....... ..........+++.+++.+.. .+|+.+|..+ |+..|..
T Consensus 33 ~~~~~~v~~~---~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v~v~~~~-----~~l~~~d~~t-G~~~W~~ 102 (238)
T PF13360_consen 33 VPDGGRVYVA---SGDGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRVYVGTSD-----GSLYALDAKT-GKVLWSI 102 (238)
T ss_dssp EEETTEEEEE---ETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEEEEEETT-----SEEEEEETTT-SCEEEEE
T ss_pred EEeCCEEEEE---cCCCEEEEEECCCCCEEEEeec-cccccceeeecccccccccce-----eeeEecccCC-cceeeee
Confidence 4456666555 2456899999988862212111 111111124577788888732 2899999877 7888853
Q ss_pred -cCC-CC---ceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 120 -PHR-ES---VKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 120 -~~~-~~---~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
... +. .....+...++.+++... ...++.+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~l~~~d~~t 141 (238)
T PF13360_consen 103 YLTSSPPAGVRSSSSPAVDGDRLYVGTS---SGKLVALDPKT 141 (238)
T ss_dssp EE-SSCTCSTB--SEEEEETTEEEEEET---CSEEEEEETTT
T ss_pred ccccccccccccccCceEecCEEEEEec---cCcEEEEecCC
Confidence 211 11 112244555666666554 23466777653
No 377
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=74.77 E-value=6.4 Score=40.56 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=38.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEE
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFF 91 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 91 (505)
+.++-|||+++++...+ .+++.|..+|..+..|..+.+.+.. .||+||+.++
T Consensus 17 d~afkPDGsqL~lAAg~----rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFA 69 (1081)
T KOG1538|consen 17 DIAFKPDGTQLILAAGS----RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFA 69 (1081)
T ss_pred eeEECCCCceEEEecCC----EEEEEeCCCcccccccccccceEEEEEEccCCceec
Confidence 67789999999887654 5999999888756666655544432 3899998654
No 378
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=74.56 E-value=10 Score=39.01 Aligned_cols=45 Identities=13% Similarity=0.232 Sum_probs=34.9
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHh--cCCCCCeEEEEecCCCCCC
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLRE--MKTDDNILLFKCELGAGHF 471 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~--~~~~~~~~~~~~~~~~gH~ 471 (505)
|++|+||..|-.+|+.++-+-|-.|.+ .|...++..|+.+ ++-|+
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~-naqHf 603 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVT-NAQHF 603 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEec-CCeec
Confidence 499999999999999998777777754 3555667777765 66663
No 379
>PLN02162 triacylglycerol lipase
Probab=74.34 E-value=6.1 Score=39.52 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
.+..+.+.++.+.++. ...++.+.|||.||.+|..+++
T Consensus 260 ay~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 3455666666555442 1358999999999999877654
No 380
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=73.56 E-value=7.5 Score=38.71 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=46.3
Q ss_pred CchhHHHHHHCCcEEEEEcccCCC--CCchhHHHccc-ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHH
Q 010654 281 FNSSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGK-FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 357 (505)
Q Consensus 281 ~~~~~~~l~~~G~~v~~~d~rG~~--~~g~~~~~~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~ 357 (505)
|....+.|+.-||. ||.. +.+-+|+.+-. .+....-+..+..-++..-+.. ..++|.|++|||||.++.
T Consensus 126 w~~~i~~lv~~GYe------~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 126 WHELIENLVGIGYE------RGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHhhCcc------cCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHHH
Confidence 44455677777875 2222 22335553211 1122234555555666554432 237999999999999999
Q ss_pred HHHhhCCC
Q 010654 358 AVLNMRPD 365 (505)
Q Consensus 358 ~~~~~~p~ 365 (505)
..+..+++
T Consensus 198 yFl~w~~~ 205 (473)
T KOG2369|consen 198 YFLKWVEA 205 (473)
T ss_pred HHHhcccc
Confidence 99988776
No 381
>PLN02934 triacylglycerol lipase
Probab=73.48 E-value=6 Score=39.99 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=28.0
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHh
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
..+..+...++.+.++. ...+|.+.|||.||.+|..++.
T Consensus 302 ~Ay~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 302 SAYYAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred hHHHHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 34455667777766653 1258999999999999887764
No 382
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=73.08 E-value=13 Score=36.91 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=32.7
Q ss_pred eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec----c---------cc------ce-eEEeeeeCCEEEE
Q 010654 33 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP----R---------VV------GV-DTAASHRGNHFFI 92 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~----~---------~~------~~-~~~~s~dg~~l~~ 92 (505)
+..++.+|.|.|+|+++.+- ..++..+|+++...+++.-. . .. |. -.+.|-||++||+
T Consensus 313 LitDI~iSlDDrfLYvs~W~--~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv 390 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSNWL--HGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV 390 (461)
T ss_dssp ----EEE-TTS-EEEEEETT--TTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred ceEeEEEccCCCEEEEEccc--CCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence 45678899999999887654 56788899888753333211 0 00 11 1348899999999
Q ss_pred EEcC
Q 010654 93 TRRS 96 (505)
Q Consensus 93 ~~~~ 96 (505)
++.-
T Consensus 391 TnSL 394 (461)
T PF05694_consen 391 TNSL 394 (461)
T ss_dssp E---
T ss_pred Eeec
Confidence 8764
No 383
>PRK13614 lipoprotein LpqB; Provisional
Probab=72.57 E-value=1.3e+02 Score=31.58 Aligned_cols=165 Identities=10% Similarity=0.074 Sum_probs=83.5
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
.++.|+||+.+++... +...+|+..... . .+.+.....-...+|+++| ++|-.-+ + ...+|.++.-.+.+..
T Consensus 347 s~avS~~g~~~A~~~~--~~~~l~~~~~g~-~-~~~~~~g~~Lt~PS~d~~g-~vWtv~~--g-~~~~vv~~~~~g~~~~ 418 (573)
T PRK13614 347 SPAESPVSQTVAFLNG--SRTTLYTVSPGQ-P-ARALTSGSTLTRPSFSPQD-WVWTAGP--G-GNGRIVAYRPTGVAEG 418 (573)
T ss_pred ceeecCCCceEEEecC--CCcEEEEecCCC-c-ceeeecCCCccCCcccCCC-CEEEeeC--C-CCceEEEEecCCCccc
Confidence 5689999999888633 335788776643 2 4444333211223488887 5554332 2 2236666554321111
Q ss_pred eE----EEcCC--CCceeeEEEEeCC--EEEEEEecCCeeEEEEEEc--CCCCCcccccCCCceeeccCCeeeecCCCCc
Q 010654 116 TV----LIPHR--ESVKLQDIQLFID--HLAVYEREGGLQKITTYRL--PAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 185 (505)
Q Consensus 116 ~~----~~~~~--~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (505)
.+ .+... ....|..+..+.| ++.++...+|..++++--+ +.+|. +..|.....+. . .......+|.
T Consensus 419 ~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~-P~~L~~~~~~~--~-~~~~~sl~W~ 494 (573)
T PRK13614 419 AQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGT-PRELTAPITLA--A-DSDADTGAWV 494 (573)
T ss_pred ccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCC-eEEccCceecc--c-CCCcceeEEc
Confidence 10 11112 1335888888887 5667666678766766443 22232 33443221211 1 0112223443
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCCCc
Q 010654 186 FSSRILRFHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 186 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 213 (505)
. ++.+++..++...-...+++.+..+.
T Consensus 495 ~-~~sl~V~~~~~~~~~~~~~v~v~~g~ 521 (573)
T PRK13614 495 G-DSTVVVTKASATSNVVPELLSVDAGQ 521 (573)
T ss_pred C-CCEEEEEeccCCCcceEEEEEeCCCC
Confidence 3 44465555555544556666664443
No 384
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=72.55 E-value=81 Score=29.16 Aligned_cols=107 Identities=17% Similarity=0.165 Sum_probs=53.5
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee---ccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT---PRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~---~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+++|||.|++|+..+-. ...-||.-. ++. +..+. .++..+ -..||++|++|+--++.. .++.....+
T Consensus 66 svAwsp~g~~La~aSFD-~t~~Iw~k~--~~e-fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK-----SVWiWe~de 136 (312)
T KOG0645|consen 66 SVAWSPHGRYLASASFD-ATVVIWKKE--DGE-FECVATLEGHENEVKCVAWSASGNYLATCSRDK-----SVWIWEIDE 136 (312)
T ss_pred eeeecCCCcEEEEeecc-ceEEEeecC--CCc-eeEEeeeeccccceeEEEEcCCCCEEEEeeCCC-----eEEEEEecC
Confidence 67999999977643322 122333322 332 44433 122111 134999999999887652 344444433
Q ss_pred CCCceE--EEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEc
Q 010654 112 TSETTV--LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRL 154 (505)
Q Consensus 112 ~~~~~~--~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~ 154 (505)
.++..- ++.+... .+..+.|-+. .|++...-+. .+.+|+-
T Consensus 137 ddEfec~aVL~~Htq-DVK~V~WHPt~dlL~S~SYDn--TIk~~~~ 179 (312)
T KOG0645|consen 137 DDEFECIAVLQEHTQ-DVKHVIWHPTEDLLFSCSYDN--TIKVYRD 179 (312)
T ss_pred CCcEEEEeeeccccc-cccEEEEcCCcceeEEeccCC--eEEEEee
Confidence 123221 3433322 3556777773 3444444332 3455553
No 385
>PLN02310 triacylglycerol lipase
Probab=71.77 E-value=6.4 Score=38.81 Aligned_cols=39 Identities=18% Similarity=0.125 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCC-CCC-CcEEEEeeChHHHHHHHHHh
Q 010654 323 FTDFIACAEYLIKNCY-CTK-EKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 323 ~~D~~~~~~~l~~~~~-~d~-~rv~i~G~S~GG~~~~~~~~ 361 (505)
.+.+.+.+..|++.-. -++ -+|.|+|||+||.++..++.
T Consensus 188 ~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 3555666666655311 122 47999999999999887764
No 386
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=71.73 E-value=1.1e+02 Score=32.75 Aligned_cols=57 Identities=18% Similarity=0.071 Sum_probs=37.6
Q ss_pred eEEEEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEE
Q 010654 33 YSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 93 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 93 (505)
....+.|||||+.+++..+.. ....+|+++.+ +. ... + ........|+++|+.+.+.
T Consensus 61 ~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g~-~~~-~-~~~v~~~~~~~~g~~~~~~ 118 (620)
T COG1506 61 GVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-GL-ITK-T-AFGVSDARWSPDGDRIAFL 118 (620)
T ss_pred cccccccCCCCCEEEEEeccCCCcceEEEEecC-Cc-eee-e-ecccccceeCCCCCeEEEE
Confidence 445678999999999998443 46899999887 32 111 1 1112234588888888774
No 387
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=70.69 E-value=34 Score=33.29 Aligned_cols=70 Identities=9% Similarity=0.090 Sum_probs=35.2
Q ss_pred eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC----CEEEEEEecCCeeEEEEEEcC
Q 010654 80 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI----DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 80 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+..|||||+.|+.++.+ ..+++ +.++.-...|.-+.+.+..+....... +.+++.+.......+..+++.
T Consensus 191 DL~FS~dgk~lasig~d----~~~VW--~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~ 264 (398)
T KOG0771|consen 191 DLDFSPDGKFLASIGAD----SARVW--SVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDIS 264 (398)
T ss_pred cceeCCCCcEEEEecCC----ceEEE--EeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEee
Confidence 45699999999988754 12444 433311222222233343344433333 245555555444445556554
No 388
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=70.61 E-value=84 Score=30.92 Aligned_cols=82 Identities=17% Similarity=-0.003 Sum_probs=39.7
Q ss_pred ceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeC
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI 134 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 134 (505)
...|+.+|.++|+...................|+.+++.+.. ..|+.++..+ ++..|.+.-............+
T Consensus 288 ~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~-----G~l~~~d~~t-G~~~~~~~~~~~~~~~sp~~~~ 361 (377)
T TIGR03300 288 DGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFE-----GYLHWLSRED-GSFVARLKTDGSGIASPPVVVG 361 (377)
T ss_pred CCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCC-----CEEEEEECCC-CCEEEEEEcCCCccccCCEEEC
Confidence 356888888877511111110111111122356677665432 3788888776 6666644322211223344555
Q ss_pred CEEEEEEe
Q 010654 135 DHLAVYER 142 (505)
Q Consensus 135 d~l~~~~~ 142 (505)
+++++...
T Consensus 362 ~~l~v~~~ 369 (377)
T TIGR03300 362 DGLLVQTR 369 (377)
T ss_pred CEEEEEeC
Confidence 66554433
No 389
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=70.41 E-value=17 Score=37.14 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=66.3
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
+..|..+|.||+.......+..+++.+++... .+.-+....|... -|.|-.-++++.+.. .+-.||+.. +
T Consensus 526 ~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~-sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~------~vRiYdL~k-q 597 (733)
T KOG0650|consen 526 QVTWHRKGDYLATVMPDSGNKSVLIHQLSKRK-SQSPFRKSKGLVQRVKFHPSKPYLFVATQR------SVRIYDLSK-Q 597 (733)
T ss_pred eeeeecCCceEEEeccCCCcceEEEEeccccc-ccCchhhcCCceeEEEecCCCceEEEEecc------ceEEEehhH-H
Confidence 67899999999888777778889999988765 2221222224322 266665566666543 444556653 1
Q ss_pred C-ceEEEcCCCCceeeEEEE--eCCEEEEEEecCCeeEEEEEEcCCCCCcc
Q 010654 114 E-TTVLIPHRESVKLQDIQL--FIDHLAVYEREGGLQKITTYRLPAVGEPL 161 (505)
Q Consensus 114 ~-~~~~~~~~~~~~i~~~~~--~~d~l~~~~~~~~~~~l~~~~~~~~~~~~ 161 (505)
+ ..-+++...- |+.++. .+|.+++....+ ++..++++.+.+..
T Consensus 598 elvKkL~tg~kw--iS~msihp~GDnli~gs~d~---k~~WfDldlsskPy 643 (733)
T KOG0650|consen 598 ELVKKLLTGSKW--ISSMSIHPNGDNLILGSYDK---KMCWFDLDLSSKPY 643 (733)
T ss_pred HHHHHHhcCCee--eeeeeecCCCCeEEEecCCC---eeEEEEcccCcchh
Confidence 1 0103333222 444444 447777776553 46778888655433
No 390
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=69.99 E-value=1.1e+02 Score=29.68 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=72.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC---ceeeeecccccee-EEe
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGVD-TAA 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~~-~~~ 83 (505)
+.|-.|||.+++..++ ++.. . -...++.+|+.+.|+-.+. ...+-+.|..++. ....+..+..-+. ..|
T Consensus 281 HTIk~WDletg~~~~~-~~~~-k--sl~~i~~~~~~~Ll~~gss---dr~irl~DPR~~~gs~v~~s~~gH~nwVssvkw 353 (423)
T KOG0313|consen 281 HTIKVWDLETGGLKST-LTTN-K--SLNCISYSPLSKLLASGSS---DRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKW 353 (423)
T ss_pred ceEEEEEeecccceee-eecC-c--ceeEeecccccceeeecCC---CCceeecCCCCCCCceeEEeeecchhhhhheec
Confidence 5688999988754333 3321 1 2235567888776653322 2346667766654 1223333332222 238
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEE
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~ 152 (505)
+|-....++....+ ..+.+.|+.....+-..+....|. +..++|.+...++....+. ++.++
T Consensus 354 sp~~~~~~~S~S~D----~t~klWDvRS~k~plydI~~h~DK-vl~vdW~~~~~IvSGGaD~--~l~i~ 415 (423)
T KOG0313|consen 354 SPTNEFQLVSGSYD----NTVKLWDVRSTKAPLYDIAGHNDK-VLSVDWNEGGLIVSGGADN--KLRIF 415 (423)
T ss_pred CCCCceEEEEEecC----CeEEEEEeccCCCcceeeccCCce-EEEEeccCCceEEeccCcc--eEEEe
Confidence 99877766665543 256666776522233345555553 6688888876666655443 34444
No 391
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=69.85 E-value=2e+02 Score=32.49 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=28.7
Q ss_pred ceEEEEE----eCCCCCceeeeeccccceeEE-eeeeCCEEEEEEcC
Q 010654 55 TRFVFYL----DVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRS 96 (505)
Q Consensus 55 ~~~l~~~----d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~ 96 (505)
..+|.++ +.++.. ...+..-+.|.... ||||++.|++.+..
T Consensus 96 ~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~ 141 (928)
T PF04762_consen 96 SGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGE 141 (928)
T ss_pred CceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCC
Confidence 3567777 555554 66665555566544 99999999999865
No 392
>PRK13615 lipoprotein LpqB; Provisional
Probab=69.30 E-value=1.5e+02 Score=30.99 Aligned_cols=162 Identities=12% Similarity=-0.037 Sum_probs=79.4
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCc
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 115 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 115 (505)
+++.|+||+.+++.... ..+|+-... +. .+.+.....-...+|+++| ++|-.-+ +.. .++......+ ..
T Consensus 338 s~avS~dg~~~A~v~~~---~~l~vg~~~-~~-~~~~~~~~~Lt~PS~d~~g-~vWtv~~--g~~-~~l~~~~~~G--~~ 406 (557)
T PRK13615 338 AATLSADGRQAAVRNAS---GVWSVGDGD-RD-AVLLDTRPGLVAPSLDAQG-YVWSTPA--SDP-RGLVAWGPDG--VG 406 (557)
T ss_pred cceEcCCCceEEEEcCC---ceEEEecCC-Cc-ceeeccCCccccCcCcCCC-CEEEEeC--CCc-eEEEEecCCC--ce
Confidence 57899999998887432 245555444 22 3333322211223488887 5554332 222 4555544322 22
Q ss_pred eEEEcCC--CCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCccccc-CCCceeeccCCeeeecCCCCcccCCE
Q 010654 116 TVLIPHR--ESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSL-QGGKSVEFIDPVYSIDPSESVFSSRI 190 (505)
Q Consensus 116 ~~~~~~~--~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (505)
. .+..+ .+..|..+..+.| ++.++...++..++++--+.-.++....| +....+. +... .....+|..+ +.
T Consensus 407 ~-~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~~~p~~l~-~~l~-~v~sl~W~~~-~~ 482 (557)
T PRK13615 407 H-PVAVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELL-ASPG-TPLDATWVDE-LD 482 (557)
T ss_pred E-EeeccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEeeeccEEcc-cCcC-cceeeEEcCC-CE
Confidence 1 12222 2346888888887 56666666666677664443223333344 3211111 1111 2222344434 44
Q ss_pred EEEEEecCCCCceEEEEECCCC
Q 010654 191 LRFHYSSLRTPPSVYDYDMDMG 212 (505)
Q Consensus 191 ~~~~~~~~~~p~~~~~~~~~~~ 212 (505)
+++.......-.+++++.+.+.
T Consensus 483 laVl~~~~~~~~~v~~v~v~g~ 504 (557)
T PRK13615 483 VATLTLAPDGERQVELHQVGGP 504 (557)
T ss_pred EEEEeccCCCCceEEEEECCCc
Confidence 5444433334345677776644
No 393
>PLN02719 triacylglycerol lipase
Probab=69.26 E-value=8.2 Score=39.10 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHcCCC---CCCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCYC---TKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~---d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
..+++.+.+..|+++.-- ..-+|.|+|||+||.++..+|.
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 446677777777664211 1248999999999999887764
No 394
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=69.15 E-value=67 Score=27.90 Aligned_cols=66 Identities=11% Similarity=0.119 Sum_probs=43.2
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEE-EEEEeCCCcEEEEEeccc----cceEEEEEeCCCCCceeeeeccc
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSL-GLQASESKKFLFIASESK----ITRFVFYLDVSKPEELRVLTPRV 76 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~-~~~~SpDg~~i~~~~~~~----~~~~l~~~d~~~~~~~~~l~~~~ 76 (505)
.||+.++.++. --.+.....+..+.. .+.|-.|-..+++..... ...+||++++.++. ...|++..
T Consensus 89 kIYIkn~~~~~-~~~L~i~~~~~k~sPK~i~WiDD~~L~vIIG~a~GTvS~GGnLy~~nl~tg~-~~~ly~~~ 159 (200)
T PF15525_consen 89 KIYIKNLNNNN-WWSLQIDQNEEKYSPKYIEWIDDNNLAVIIGYAHGTVSKGGNLYKYNLNTGN-LTELYEWK 159 (200)
T ss_pred eEEEEecCCCc-eEEEEecCcccccCCceeEEecCCcEEEEEccccceEccCCeEEEEEccCCc-eeEeeecc
Confidence 58899987642 222333322234444 567888887776665443 35799999999997 88887653
No 395
>PLN03037 lipase class 3 family protein; Provisional
Probab=68.33 E-value=8.3 Score=39.11 Aligned_cols=38 Identities=21% Similarity=0.171 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHcCC-C-CCCcEEEEeeChHHHHHHHHHh
Q 010654 324 TDFIACAEYLIKNCY-C-TKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~-~-d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
+.+.+.+..|++.-- . ..-+|.|.|||+||.+|..+|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 344455555554311 1 1247999999999999887764
No 396
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=66.95 E-value=85 Score=35.27 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=63.2
Q ss_pred eEEEEEEeCCCcEEEEEecc--cc-ceEEEEEeCCCCCceeeeecccccee--EEeeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 33 YSLGLQASESKKFLFIASES--KI-TRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 33 ~~~~~~~SpDg~~i~~~~~~--~~-~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
-.+.+.|-.||++++++.-. .. ...+-+.+-+ |. +.-.....+|.. ..|-|.|..|+-..... ....+..+
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~-L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~--~~~~VvFf 286 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE-LQSTSEPVDGLEGALSWRPSGNLIASSQRLP--DRHDVVFF 286 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce-EEeccccCCCccCCccCCCCCCEEEEEEEcC--CCcEEEEE
Confidence 44567899999999988652 22 3445555554 43 444444444443 35999999888777542 33578888
Q ss_pred eCCCCCCceEEEcC-CCCceeeEEEEeCCEEEEE
Q 010654 108 PVDNTSETTVLIPH-RESVKLQDIQLFIDHLAVY 140 (505)
Q Consensus 108 ~~~~~~~~~~~~~~-~~~~~i~~~~~~~d~l~~~ 140 (505)
.-.|..-.+..+.. ..+..+..+.|+.|.-+++
T Consensus 287 ErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLA 320 (928)
T PF04762_consen 287 ERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILA 320 (928)
T ss_pred ecCCcEeeeEecCCCCCCceeeEEEECCCCCEEE
Confidence 87763222222332 3344678899998753333
No 397
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=66.60 E-value=1.9e+02 Score=31.01 Aligned_cols=130 Identities=10% Similarity=0.094 Sum_probs=63.9
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeC-CCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeC
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRG 87 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg 87 (505)
|-+|+++.. +-..+|. .++|.--+++.| |.+|+ ++..-...-+||-| ...+ +--.+.-.+-+ ...++|||
T Consensus 392 VRLWh~~~~--~CL~~F~--HndfVTcVaFnPvDDryF-iSGSLD~KvRiWsI--~d~~-Vv~W~Dl~~lITAvcy~PdG 463 (712)
T KOG0283|consen 392 VRLWHPGRK--ECLKVFS--HNDFVTCVAFNPVDDRYF-ISGSLDGKVRLWSI--SDKK-VVDWNDLRDLITAVCYSPDG 463 (712)
T ss_pred EEeecCCCc--ceeeEEe--cCCeeEEEEecccCCCcE-eecccccceEEeec--CcCe-eEeehhhhhhheeEEeccCC
Confidence 778888764 3455665 456887888888 55553 33322234445544 3322 22222222111 13489998
Q ss_pred CEEEEEEcCCCCCCceEEEeeCCCCC-CceEEEcCC-----CCceeeEEEEeC---CEEEEEEecCCeeEEEEEEcC
Q 010654 88 NHFFITRRSDELFNSELLACPVDNTS-ETTVLIPHR-----ESVKLQDIQLFI---DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 88 ~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-----~~~~i~~~~~~~---d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+..++=+-. | ....|+..+.. ..++.+... ....|.+++..+ +.++++.++ +++.+|+..
T Consensus 464 k~avIGt~~-G----~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnD---SrIRI~d~~ 532 (712)
T KOG0283|consen 464 KGAVIGTFN-G----YCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSND---SRIRIYDGR 532 (712)
T ss_pred ceEEEEEec-c----EEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCC---CceEEEecc
Confidence 876665543 2 23333333211 111111111 012467777664 345555444 467788863
No 398
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=66.33 E-value=77 Score=31.50 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=41.2
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec-ccccee-EEe
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TAA 83 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~-~~~ 83 (505)
|| .|.+|.+.-.+.....+. . |.-.....-+|+|.+++-. ....+||+..+++|. +-.+.. +-.... ..|
T Consensus 60 rp-~l~vw~i~k~~~~~q~~v-~--Pg~v~al~s~n~G~~l~ag---~i~g~lYlWelssG~-LL~v~~aHYQ~ITcL~f 131 (476)
T KOG0646|consen 60 RP-LLHVWEILKKDQVVQYIV-L--PGPVHALASSNLGYFLLAG---TISGNLYLWELSSGI-LLNVLSAHYQSITCLKF 131 (476)
T ss_pred Cc-cccccccCchhhhhhhcc-c--ccceeeeecCCCceEEEee---cccCcEEEEEecccc-HHHHHHhhccceeEEEE
Confidence 44 577777754322110111 1 1122345668999887643 234579999999997 333221 111111 237
Q ss_pred eeeCCEEE
Q 010654 84 SHRGNHFF 91 (505)
Q Consensus 84 s~dg~~l~ 91 (505)
|.||+.|+
T Consensus 132 s~dgs~ii 139 (476)
T KOG0646|consen 132 SDDGSHII 139 (476)
T ss_pred eCCCcEEE
Confidence 87777554
No 399
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=66.11 E-value=81 Score=30.55 Aligned_cols=112 Identities=12% Similarity=0.064 Sum_probs=61.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
+++|||.-+-++++.+-...-.||=+...-.+ .-.+++...+ ...+|+-+-. |+... ++.+.+-+.|+..+.
T Consensus 262 DLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-~~~~~kAh~sDVNVISWnr~~~-lLasG----~DdGt~~iwDLR~~~ 335 (440)
T KOG0302|consen 262 DLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-AAVSTKAHNSDVNVISWNRREP-LLASG----GDDGTLSIWDLRQFK 335 (440)
T ss_pred hhccCCccCceEEeeecCceEEEEEecCCCcc-ceeEeeccCCceeeEEccCCcc-eeeec----CCCceEEEEEhhhcc
Confidence 57999999998887665444455544433222 3333433222 1234654433 22222 233467777876533
Q ss_pred CceE--EEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCC
Q 010654 114 ETTV--LIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 114 ~~~~--~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..+. .+..... .|..+.|.+. .++.+...+ .++.+|++..
T Consensus 336 ~~~pVA~fk~Hk~-pItsieW~p~e~s~iaasg~D--~QitiWDlsv 379 (440)
T KOG0302|consen 336 SGQPVATFKYHKA-PITSIEWHPHEDSVIAASGED--NQITIWDLSV 379 (440)
T ss_pred CCCcceeEEeccC-CeeEEEeccccCceEEeccCC--CcEEEEEeec
Confidence 2221 3443333 5889999873 555554444 4677888874
No 400
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=65.83 E-value=40 Score=31.70 Aligned_cols=83 Identities=13% Similarity=0.102 Sum_probs=40.4
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc-eeEEeeeeC
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRG 87 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg 87 (505)
++-+|++.|++- .+-|+.....=....++|.|+++|+-.+... -+.+--+++|+-++.+..+..- ....|++||
T Consensus 286 kIKvWri~tG~C--lRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~---tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG 360 (508)
T KOG0275|consen 286 KIKVWRIETGQC--LRRFDRAHTKGVTCLSFSRDNSQILSASFDQ---TVRIHGLKSGKCLKEFRGHSSYVNEATFTDDG 360 (508)
T ss_pred cEEEEEEecchH--HHHhhhhhccCeeEEEEccCcchhhcccccc---eEEEeccccchhHHHhcCccccccceEEcCCC
Confidence 566777777642 2222211111123567899999875332221 1233345555412222211111 122389999
Q ss_pred CEEEEEEcC
Q 010654 88 NHFFITRRS 96 (505)
Q Consensus 88 ~~l~~~~~~ 96 (505)
.+++-.+.+
T Consensus 361 ~~iisaSsD 369 (508)
T KOG0275|consen 361 HHIISASSD 369 (508)
T ss_pred CeEEEecCC
Confidence 987766654
No 401
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=65.81 E-value=2e+02 Score=31.10 Aligned_cols=81 Identities=12% Similarity=0.071 Sum_probs=41.5
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEE-ecCCeeEEEEEEcCCCCCcccccCCCceeeccCCeeeec
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE-REGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 180 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (505)
..+.++|..+....+ .+-...+ .|.+++.++|+..++. ..++ .+.+||+.+ +..+. .+.++.+ ..
T Consensus 556 f~I~vvD~~t~kvvR-~f~gh~n-ritd~~FS~DgrWlisasmD~--tIr~wDlpt-~~lID------~~~vd~~---~~ 621 (910)
T KOG1539|consen 556 FSIRVVDVVTRKVVR-EFWGHGN-RITDMTFSPDGRWLISASMDS--TIRTWDLPT-GTLID------GLLVDSP---CT 621 (910)
T ss_pred eeEEEEEchhhhhhH-Hhhcccc-ceeeeEeCCCCcEEEEeecCC--cEEEEeccC-cceee------eEecCCc---ce
Confidence 355556654322222 2222223 4788899888544443 3333 477899986 32221 2222222 12
Q ss_pred CCCCcccCCEEEEEEe
Q 010654 181 PSESVFSSRILRFHYS 196 (505)
Q Consensus 181 ~~~~~~~~~~~~~~~~ 196 (505)
.++++|+++.++.+..
T Consensus 622 sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 622 SLSFSPNGDFLATVHV 637 (910)
T ss_pred eeEECCCCCEEEEEEe
Confidence 3567888886655544
No 402
>KOG4328 consensus WD40 protein [Function unknown]
Probab=65.19 E-value=91 Score=30.99 Aligned_cols=172 Identities=8% Similarity=-0.024 Sum_probs=77.7
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCc-eEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecc-ccceeE---E
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDI-YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVDT---A 82 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~-~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~---~ 82 (505)
-+|-+||+++.+.+...++-.+... -.....++|-..--+++++- ..-+-+.|++++. .+.+... .+...+ .
T Consensus 210 G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSy--DGtiR~~D~~~~i-~e~v~s~~~d~~~fs~~d 286 (498)
T KOG4328|consen 210 GQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSY--DGTIRLQDFEGNI-SEEVLSLDTDNIWFSSLD 286 (498)
T ss_pred CcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeecc--Cceeeeeeecchh-hHHHhhcCccceeeeecc
Confidence 3577889875444322233222211 12244566644333333222 2235667777765 3333222 112222 2
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
++.+...++|..+-+ .+-++|+...+.+-|.+.-... .|..++..+- +.+.++..++ ...+||+..=+++
T Consensus 287 ~~~e~~~vl~~~~~G-----~f~~iD~R~~~s~~~~~~lh~k-KI~sv~~NP~~p~~laT~s~D~--T~kIWD~R~l~~K 358 (498)
T KOG4328|consen 287 FSAESRSVLFGDNVG-----NFNVIDLRTDGSEYENLRLHKK-KITSVALNPVCPWFLATASLDQ--TAKIWDLRQLRGK 358 (498)
T ss_pred ccCCCccEEEeeccc-----ceEEEEeecCCccchhhhhhhc-ccceeecCCCCchheeecccCc--ceeeeehhhhcCC
Confidence 777777788877652 3344555432332222222222 5777777664 4444444333 3457776421111
Q ss_pred ccccCCCceeeccCCeeeecCCCCcccCCEEEEEE
Q 010654 161 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHY 195 (505)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (505)
..+ .+..-.....+.+..+||+++.++.++
T Consensus 359 ~sp-----~lst~~HrrsV~sAyFSPs~gtl~TT~ 388 (498)
T KOG4328|consen 359 ASP-----FLSTLPHRRSVNSAYFSPSGGTLLTTC 388 (498)
T ss_pred CCc-----ceecccccceeeeeEEcCCCCceEeec
Confidence 100 011101112344456788888755443
No 403
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=65.09 E-value=18 Score=35.20 Aligned_cols=79 Identities=11% Similarity=0.104 Sum_probs=46.2
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEE-----EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee--cccc-
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSL-----GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVV- 77 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~-----~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~--~~~~- 77 (505)
|.-.+-++|+.+.+ -+..|.. +.|.. .+.+||||+|++..+ -...||+.++.+++ +.... ....
T Consensus 361 RDdtl~viDlRt~e--I~~~~sA--~g~k~asDwtrvvfSpd~~YvaAGS---~dgsv~iW~v~tgK-lE~~l~~s~s~~ 432 (459)
T KOG0288|consen 361 RDDTLKVIDLRTKE--IRQTFSA--EGFKCASDWTRVVFSPDGSYVAAGS---ADGSVYIWSVFTGK-LEKVLSLSTSNA 432 (459)
T ss_pred CCCceeeeeccccc--EEEEeec--cccccccccceeEECCCCceeeecc---CCCcEEEEEccCce-EEEEeccCCCCc
Confidence 44457778887742 3444432 22322 356899999987543 34579999999997 43322 2222
Q ss_pred cee-EEeeeeCCEEEE
Q 010654 78 GVD-TAASHRGNHFFI 92 (505)
Q Consensus 78 ~~~-~~~s~dg~~l~~ 92 (505)
++. ..|+|-|+.+.=
T Consensus 433 aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 433 AITSLSWNPSGSGLLS 448 (459)
T ss_pred ceEEEEEcCCCchhhc
Confidence 222 348887776543
No 404
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=64.99 E-value=68 Score=30.16 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=31.1
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 321 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 321 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..-..+..+..+|.++- -..++|.++|+|-|++++-.++..
T Consensus 72 g~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 34466677888876653 445789999999999998777765
No 405
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=64.93 E-value=13 Score=35.73 Aligned_cols=84 Identities=10% Similarity=0.070 Sum_probs=48.9
Q ss_pred EEEEEcccCCCCCchhHHHcccc-cCCcchHHHHHHHHHHHH-HcCCCCCCcEEEEeeChHHHHHHHHHhh----C----
Q 010654 294 IFAIAQIRGGGELGRQWYENGKF-LKKKNTFTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLIGAVLNM----R---- 363 (505)
Q Consensus 294 ~v~~~d~rG~~~~g~~~~~~~~~-~~~~~~~~D~~~~~~~l~-~~~~~d~~rv~i~G~S~GG~~~~~~~~~----~---- 363 (505)
.++.+|.+-+.||.. ...... ..-....+|+..++.... ..+......+.|+|.||||..+-.++.. .
T Consensus 3 NvLfiDqPvGvGfSy--~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSY--SKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCC--CCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccccc
Confidence 477888774444432 111001 111123477777776444 4455556789999999999855444432 1
Q ss_pred --CCceeEEEecCCchhh
Q 010654 364 --PDLFKAAVAAVPFVDV 379 (505)
Q Consensus 364 --p~~~~a~v~~~~~~d~ 379 (505)
+=-+++++...|.++.
T Consensus 81 ~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 81 EPPINLQGYMLGNPVTYM 98 (319)
T ss_pred CCceeeeEEEeCCCCCCc
Confidence 1147888888887764
No 406
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.55 E-value=49 Score=30.89 Aligned_cols=130 Identities=8% Similarity=0.085 Sum_probs=69.3
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEecccc--ceEEEEEeCCCCCceeeee----ccccceeEEe
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI--TRFVFYLDVSKPEELRVLT----PRVVGVDTAA 83 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~--~~~l~~~d~~~~~~~~~l~----~~~~~~~~~~ 83 (505)
.++.|..+.+ +...+....+..|+---.+||||++|+.+.+..+ +.-|=++|...+ ...+- ..-...+..|
T Consensus 93 ~~vfD~~~~~-~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~--fqrvgE~~t~GiGpHev~l 169 (366)
T COG3490 93 AMVFDPNGAQ-EPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG--FQRVGEFSTHGIGPHEVTL 169 (366)
T ss_pred EEEECCCCCc-CcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc--cceecccccCCcCcceeEE
Confidence 4556665443 2333444445567776689999999988877654 345666676643 22221 1111123458
Q ss_pred eeeCCEEEEEEc---C--C-C-------CCCceEEEeeCCCCCC--ceEEEcC-CCCceeeEEEEeCC-EEEEEEec
Q 010654 84 SHRGNHFFITRR---S--D-E-------LFNSELLACPVDNTSE--TTVLIPH-RESVKLQDIQLFID-HLAVYERE 143 (505)
Q Consensus 84 s~dg~~l~~~~~---~--~-~-------~~~~~l~~~~~~~~~~--~~~~~~~-~~~~~i~~~~~~~d-~l~~~~~~ 143 (505)
.+||+.+++..- . + + .-...|.++|..+ |. ++-.++. ....++.-++..+| ++++...-
T Consensus 170 m~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~at-G~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy 245 (366)
T COG3490 170 MADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAAT-GNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQY 245 (366)
T ss_pred ecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccc-cchhhhccCchhhhhcceeeeeeCCCCcEEEEEEe
Confidence 999999887753 1 1 0 1123567777443 21 1113332 22234556666666 45555443
No 407
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=64.46 E-value=30 Score=31.36 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=19.0
Q ss_pred CCCcEEEEeeChHHHHHHHHHhh
Q 010654 340 TKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 340 d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..+++.|+|+|+|+.++..++.+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHH
Confidence 56789999999999988776654
No 408
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=64.40 E-value=16 Score=31.79 Aligned_cols=39 Identities=21% Similarity=0.467 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
...++...++...++. -..++.++|+|.|+.++..++..
T Consensus 63 G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 63 GVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHh
Confidence 3455555565544442 12589999999999999998876
No 409
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=64.40 E-value=48 Score=34.64 Aligned_cols=107 Identities=13% Similarity=0.004 Sum_probs=53.4
Q ss_pred CceEEEEEEeCCCcEEEEEeccc--------cceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCC
Q 010654 31 DIYSLGLQASESKKFLFIASESK--------ITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFN 101 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~--------~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~ 101 (505)
++|..+..|+|+|..|+-.+... .++-||+-.+.-|. + .....|... .|+|++.-++-.+.. | .
T Consensus 267 eDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe-~---gg~a~GF~g~lw~~n~~~ii~~g~~-G--g 339 (764)
T KOG1063|consen 267 EDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGE-V---GGSAGGFWGGLWSPNSNVIIAHGRT-G--G 339 (764)
T ss_pred ccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeec-c---cccccceeeEEEcCCCCEEEEeccc-C--c
Confidence 56777889999996654333221 13334444332222 1 111112111 299998655544433 3 2
Q ss_pred ceEEEeeCCCCCCceE----EEcCCCCceeeEEEEeCCE-EEEEEecCCeeEE
Q 010654 102 SELLACPVDNTSETTV----LIPHRESVKLQDIQLFIDH-LAVYEREGGLQKI 149 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l 149 (505)
.+++. +. ....| .+....+ .+.+++|.+.+ .++.+..+..+++
T Consensus 340 ~hlWk-t~---d~~~w~~~~~iSGH~~-~V~dv~W~psGeflLsvs~DQTTRl 387 (764)
T KOG1063|consen 340 FHLWK-TK---DKTFWTQEPVISGHVD-GVKDVDWDPSGEFLLSVSLDQTTRL 387 (764)
T ss_pred EEEEe-cc---Cccceeeccccccccc-cceeeeecCCCCEEEEeccccceee
Confidence 46766 21 23445 2333334 47899999754 3334444444444
No 410
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=63.01 E-value=1.5e+02 Score=28.63 Aligned_cols=107 Identities=20% Similarity=0.247 Sum_probs=59.8
Q ss_pred EEEEeCCCcEEEEEecc---ccceEEEEEeCCCCCceeee-ecc--------------cccee-EEeeeeCCEEEEEEcC
Q 010654 36 GLQASESKKFLFIASES---KITRFVFYLDVSKPEELRVL-TPR--------------VVGVD-TAASHRGNHFFITRRS 96 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~---~~~~~l~~~d~~~~~~~~~l-~~~--------------~~~~~-~~~s~dg~~l~~~~~~ 96 (505)
++++.+||.+.+-.-.. .....|+.++.+ |...+.+ .+. ..|.+ ..++|||+.||.....
T Consensus 89 gi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~ 167 (326)
T PF13449_consen 89 GIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMES 167 (326)
T ss_pred HeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECc
Confidence 45667788764433222 124689999987 4312222 111 11222 2489999988887764
Q ss_pred C----CCC-------CceEEEeeCCCCC--CceEEEcCC------CCceeeEEEEeCCE-EEEEEec
Q 010654 97 D----ELF-------NSELLACPVDNTS--ETTVLIPHR------ESVKLQDIQLFIDH-LAVYERE 143 (505)
Q Consensus 97 ~----~~~-------~~~l~~~~~~~~~--~~~~~~~~~------~~~~i~~~~~~~d~-l~~~~~~ 143 (505)
. +.. ..+|+.+|....+ ..+|...-+ ....++++.+.+++ +++..+.
T Consensus 168 ~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~ 234 (326)
T PF13449_consen 168 PLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERD 234 (326)
T ss_pred cccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEcc
Confidence 2 111 1588899987533 334444433 34567888887764 5555544
No 411
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=62.53 E-value=12 Score=36.23 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 324 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 324 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
..+.+.++.|+...- .-+|.+.|||.||.+|..++..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 455556666665532 3589999999999998877653
No 412
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=62.37 E-value=44 Score=33.34 Aligned_cols=81 Identities=16% Similarity=0.146 Sum_probs=44.0
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 341 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 341 (505)
+.|+++...--...-..+........|.+.|+.|+-|.. | .+. ....+..+..+.+++...+..+....-...
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~-g--~la----~~~~g~gr~~~~~~I~~~~~~~~~~~~l~g 188 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPAS-G--RLA----CGDVGPGRMAEPEEIVAAAERALSPKDLAG 188 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCC-c--ccc----CCCcCCCCCCCHHHHHHHHHHHhhhcccCC
Confidence 468888873211111112223345678889999886653 1 110 001122334667888777765554322345
Q ss_pred CcEEEEee
Q 010654 342 EKLCIEGR 349 (505)
Q Consensus 342 ~rv~i~G~ 349 (505)
.++.|.|+
T Consensus 189 k~vlITgG 196 (399)
T PRK05579 189 KRVLITAG 196 (399)
T ss_pred CEEEEeCC
Confidence 68889998
No 413
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=61.67 E-value=1.4e+02 Score=27.75 Aligned_cols=112 Identities=8% Similarity=0.008 Sum_probs=55.6
Q ss_pred EEEEEEeCC-CcEEEEEeccccceEEEEEeCCCCCceeeeeccccc----e-eEEeeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 34 SLGLQASES-KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG----V-DTAASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 34 ~~~~~~SpD-g~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~----~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
...++|+|- |. |+.+... ...|-+.+..++..+.+.+--.++ + ...|||+|+.|+--+-+ . -....
T Consensus 17 ~W~~awhp~~g~-ilAscg~--Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD-~----t~~Iw 88 (312)
T KOG0645|consen 17 VWSVAWHPGKGV-ILASCGT--DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD-A----TVVIW 88 (312)
T ss_pred EEEEEeccCCce-EEEeecC--CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeecc-c----eEEEe
Confidence 446789998 76 3443332 334555555533223333211111 1 23499999977655533 1 12222
Q ss_pred eCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 108 PVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 108 ~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
.-.+ ++..- .+... +..+..++|+.++-+++.-...+ .++++.++.
T Consensus 89 ~k~~-~efecv~~lEGH-EnEVK~Vaws~sG~~LATCSRDK-SVWiWe~de 136 (312)
T KOG0645|consen 89 KKED-GEFECVATLEGH-ENEVKCVAWSASGNYLATCSRDK-SVWIWEIDE 136 (312)
T ss_pred ecCC-CceeEEeeeecc-ccceeEEEEcCCCCEEEEeeCCC-eEEEEEecC
Confidence 2122 22221 23333 33477899998765554333333 378888873
No 414
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=61.40 E-value=1.3e+02 Score=28.57 Aligned_cols=70 Identities=16% Similarity=0.130 Sum_probs=44.3
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..-.++|+-|.++++...+ ..|.++|+.|-.-.+.++.+-..+ ...||+||+.|.=.+.+ ..+.+.|+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~n---G~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D-----~si~lwDl~~ 96 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCAN---GRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRD-----WSIKLWDLLK 96 (405)
T ss_pred cceEEeccCcceeeeeccC---CcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCC-----ceeEEEeccC
Confidence 3356789999998876543 468888988764223344333222 24599999877655433 2566677654
No 415
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=61.29 E-value=1.4e+02 Score=29.86 Aligned_cols=73 Identities=11% Similarity=-0.020 Sum_probs=41.0
Q ss_pred ceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEe
Q 010654 55 TRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF 133 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 133 (505)
.+-|-++|+..+.....++.+.+.+. ..|||+|++++.-+.+ ..+...+... + .- +-....+..|-.++|.
T Consensus 431 dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~d-----g~V~iws~~~-~-~l-~~s~~~~~~Ifel~Wn 502 (524)
T KOG0273|consen 431 DSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLD-----GCVHIWSTKT-G-KL-VKSYQGTGGIFELCWN 502 (524)
T ss_pred CCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCC-----CeeEeccccc-h-he-eEeecCCCeEEEEEEc
Confidence 45677788888763445656654433 3499999988765433 2455445433 1 11 1122223346677786
Q ss_pred CC
Q 010654 134 ID 135 (505)
Q Consensus 134 ~d 135 (505)
.+
T Consensus 503 ~~ 504 (524)
T KOG0273|consen 503 AA 504 (524)
T ss_pred CC
Confidence 54
No 416
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=60.33 E-value=1.2e+02 Score=28.52 Aligned_cols=139 Identities=9% Similarity=0.054 Sum_probs=63.9
Q ss_pred EEEEECCCCCC---CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc--ceeEEee
Q 010654 10 AWLHKLEADQS---NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV--GVDTAAS 84 (505)
Q Consensus 10 l~~~~lgt~~~---~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~--~~~~~~s 84 (505)
.-+|++.+++. +..+|-+. .+-| +++|+.+|+.++.+..... .+.+.|+..-...+.+..... ......+
T Consensus 175 CTiWdie~~~~~~vkTQLIAHD-KEV~--DIaf~~~s~~~FASvgaDG--SvRmFDLR~leHSTIIYE~p~~~~pLlRLs 249 (364)
T KOG0290|consen 175 CTIWDIETGVSGTVKTQLIAHD-KEVY--DIAFLKGSRDVFASVGADG--SVRMFDLRSLEHSTIIYEDPSPSTPLLRLS 249 (364)
T ss_pred EEEEEEeeccccceeeEEEecC-ccee--EEEeccCccceEEEecCCC--cEEEEEecccccceEEecCCCCCCcceeec
Confidence 45677766533 34445432 2323 5678999999887765433 234444443321233332211 1111222
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
....-..|+.+- ..+...+..+|+.-++.+--.+... ...+.++.|.+..---+++.+.-.+..+++++
T Consensus 250 wnkqDpnymATf-~~dS~~V~iLDiR~P~tpva~L~~H-~a~VNgIaWaPhS~~hictaGDD~qaliWDl~ 318 (364)
T KOG0290|consen 250 WNKQDPNYMATF-AMDSNKVVILDIRVPCTPVARLRNH-QASVNGIAWAPHSSSHICTAGDDCQALIWDLQ 318 (364)
T ss_pred cCcCCchHHhhh-hcCCceEEEEEecCCCcceehhhcC-cccccceEecCCCCceeeecCCcceEEEEecc
Confidence 111122222221 1123467777765433221112212 23577899988632222222333566778876
No 417
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=59.59 E-value=98 Score=30.97 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=43.8
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE-EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 160 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~ 160 (505)
.|+|++++++....++. ..-..|+++ ...+. +.++..++...++...+++++++..-+|. +.+|+....+..
T Consensus 117 ~f~~~d~t~l~s~sDd~----v~k~~d~s~-a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~--vrl~DtR~~~~~ 189 (487)
T KOG0310|consen 117 KFSPQDNTMLVSGSDDK----VVKYWDLST-AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK--VRLWDTRSLTSR 189 (487)
T ss_pred EecccCCeEEEecCCCc----eEEEEEcCC-cEEEEEecCCcceeEeeccccCCCeEEEecCCCce--EEEEEeccCCce
Confidence 48999988877765531 233334544 33332 33333343344444455789998877775 456776554443
Q ss_pred ccccCCCc
Q 010654 161 LKSLQGGK 168 (505)
Q Consensus 161 ~~~l~~~~ 168 (505)
+..|..+.
T Consensus 190 v~elnhg~ 197 (487)
T KOG0310|consen 190 VVELNHGC 197 (487)
T ss_pred eEEecCCC
Confidence 33343333
No 418
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=59.18 E-value=1.1e+02 Score=32.06 Aligned_cols=119 Identities=16% Similarity=0.127 Sum_probs=63.8
Q ss_pred ceEE-EEEEeCCCcEEEEEecc--ccceEEEEEeCCCCCceeeeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 32 IYSL-GLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 32 ~~~~-~~~~SpDg~~i~~~~~~--~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
.|.+ ..+.||+|..|+-...+ .....|++.+..+-.+...|..+.-++ ...|||||++|.=.+.+ . ...||-.
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRD-R--t~sl~~~ 601 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRD-R--TVSLYEV 601 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecC-c--eEEeeee
Confidence 3554 57889999987655433 356789999877643233343333232 23499999998877754 1 1234433
Q ss_pred eCCCCCCceEEEcCCCCceeeEEEEeCCEEEE-EEecCCeeEEEEEEcC
Q 010654 108 PVDNTSETTVLIPHRESVKLQDIQLFIDHLAV-YEREGGLQKITTYRLP 155 (505)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~-~~~~~~~~~l~~~~~~ 155 (505)
--....+.+.-....-.+-|-+.+|.++..+| ++.++. .+.+|..+
T Consensus 602 ~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK--~VkVW~~~ 648 (764)
T KOG1063|consen 602 QEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDK--KVKVWEEP 648 (764)
T ss_pred ecccchhhhhccccccceEEEEcccCcccceeEEecCCc--eEEEEecc
Confidence 11111111110111112345567788887644 444543 35667765
No 419
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=58.27 E-value=1.5e+02 Score=27.21 Aligned_cols=140 Identities=13% Similarity=0.150 Sum_probs=72.8
Q ss_pred CceEEEEECCCCCC-CCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEE--
Q 010654 7 PDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTA-- 82 (505)
Q Consensus 7 ~~~l~~~~lgt~~~-~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~-- 82 (505)
+-+|+++++..+++ ..-.-|+..| -..+++||+.-..+++.......-+|| |+.-.. .+..+.++... .++
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D--~LfdV~Wse~~e~~~~~a~GDGSLrl~--d~~~~s~Pi~~~kEH~~E-V~Svd 111 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTED--GLFDVAWSENHENQVIAASGDGSLRLF--DLTMPSKPIHKFKEHKRE-VYSVD 111 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeeccc--ceeEeeecCCCcceEEEEecCceEEEe--ccCCCCcchhHHHhhhhh-eEEec
Confidence 45789999853322 1222233323 234678999998888877665444444 433222 13333333322 233
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
|.+-.+...+++.-++ .-+|+..+... ..+ .+....+ .|-...|++. .++..+.-++ .+.++++...|+
T Consensus 112 wn~~~r~~~ltsSWD~--TiKLW~~~r~~--Sv~-Tf~gh~~-~Iy~a~~sp~~~nlfas~Sgd~--~l~lwdvr~~gk 182 (311)
T KOG0277|consen 112 WNTVRRRIFLTSSWDG--TIKLWDPNRPN--SVQ-TFNGHNS-CIYQAAFSPHIPNLFASASGDG--TLRLWDVRSPGK 182 (311)
T ss_pred cccccceeEEeeccCC--ceEeecCCCCc--ceE-eecCCcc-EEEEEecCCCCCCeEEEccCCc--eEEEEEecCCCc
Confidence 7777777776664332 23444444322 111 2333333 4667777774 4555555554 456677665454
No 420
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=57.78 E-value=1.6e+02 Score=27.34 Aligned_cols=113 Identities=8% Similarity=0.028 Sum_probs=61.0
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE-eeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
..|.-+..+..||. ++-++..-..|.|..+|+++++ ...-.+-....... +..-++.||.++... ...+++|.
T Consensus 44 ~aFTQGL~~~~~g~-LyESTG~yG~S~l~~~d~~tg~-~~~~~~l~~~~FgEGit~~~d~l~qLTWk~----~~~f~yd~ 117 (264)
T PF05096_consen 44 TAFTQGLEFLDDGT-LYESTGLYGQSSLRKVDLETGK-VLQSVPLPPRYFGEGITILGDKLYQLTWKE----GTGFVYDP 117 (264)
T ss_dssp T-EEEEEEEEETTE-EEEEECSTTEEEEEEEETTTSS-EEEEEE-TTT--EEEEEEETTEEEEEESSS----SEEEEEET
T ss_pred cccCccEEecCCCE-EEEeCCCCCcEEEEEEECCCCc-EEEEEECCccccceeEEEECCEEEEEEecC----CeEEEEcc
Confidence 44666888877775 3344444568999999999997 33322221111111 555688999999763 37888898
Q ss_pred CCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 110 DNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 110 ~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
+++.... .++-..+. -+++-+++.++.. +|..+++.++..
T Consensus 118 ~tl~~~~-~~~y~~EG--WGLt~dg~~Li~S---DGS~~L~~~dP~ 157 (264)
T PF05096_consen 118 NTLKKIG-TFPYPGEG--WGLTSDGKRLIMS---DGSSRLYFLDPE 157 (264)
T ss_dssp TTTEEEE-EEE-SSS----EEEECSSCEEEE----SSSEEEEE-TT
T ss_pred ccceEEE-EEecCCcc--eEEEcCCCEEEEE---CCccceEEECCc
Confidence 7643222 22211110 1233333443333 566777777643
No 421
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=57.38 E-value=1.8e+02 Score=28.80 Aligned_cols=14 Identities=7% Similarity=-0.107 Sum_probs=7.1
Q ss_pred eEEEeeCCCCCCceE
Q 010654 103 ELLACPVDNTSETTV 117 (505)
Q Consensus 103 ~l~~~~~~~~~~~~~ 117 (505)
.|+.+|.++ |+..|
T Consensus 346 ~l~~ld~~t-G~~~~ 359 (394)
T PRK11138 346 YLHWINRED-GRFVA 359 (394)
T ss_pred EEEEEECCC-CCEEE
Confidence 455555554 44444
No 422
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=57.34 E-value=1.6e+02 Score=29.22 Aligned_cols=88 Identities=14% Similarity=0.090 Sum_probs=48.5
Q ss_pred eEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC
Q 010654 56 RFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 135 (505)
Q Consensus 56 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d 135 (505)
..++.+|+++|+ . ... ...+.......+++.+|+.+.. .+|+.+|.++ |+..|................++
T Consensus 266 g~l~ald~~tG~-~-~W~-~~~~~~~~~~~~~~~vy~~~~~-----g~l~ald~~t-G~~~W~~~~~~~~~~~sp~v~~g 336 (394)
T PRK11138 266 GNLVALDLRSGQ-I-VWK-REYGSVNDFAVDGGRIYLVDQN-----DRVYALDTRG-GVELWSQSDLLHRLLTAPVLYNG 336 (394)
T ss_pred CeEEEEECCCCC-E-EEe-ecCCCccCcEEECCEEEEEcCC-----CeEEEEECCC-CcEEEcccccCCCcccCCEEECC
Confidence 578889998886 1 111 1111111133467788887643 4899999876 67777332211222334444556
Q ss_pred EEEEEEecCCeeEEEEEEcC
Q 010654 136 HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 136 ~l~~~~~~~~~~~l~~~~~~ 155 (505)
.+++. ..+| .++.++..
T Consensus 337 ~l~v~-~~~G--~l~~ld~~ 353 (394)
T PRK11138 337 YLVVG-DSEG--YLHWINRE 353 (394)
T ss_pred EEEEE-eCCC--EEEEEECC
Confidence 66544 4444 46667654
No 423
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=55.50 E-value=2.1e+02 Score=28.02 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=51.8
Q ss_pred CcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcC
Q 010654 43 KKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH 121 (505)
Q Consensus 43 g~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 121 (505)
|..|++... ...|+.+|.++|+ .++.-... ........+++.+|+.+.. ..|+.+|.++ |+..|....
T Consensus 65 ~~~v~v~~~---~g~v~a~d~~tG~~~W~~~~~~--~~~~~p~v~~~~v~v~~~~-----g~l~ald~~t-G~~~W~~~~ 133 (377)
T TIGR03300 65 GGKVYAADA---DGTVVALDAETGKRLWRVDLDE--RLSGGVGADGGLVFVGTEK-----GEVIALDAED-GKELWRAKL 133 (377)
T ss_pred CCEEEEECC---CCeEEEEEccCCcEeeeecCCC--CcccceEEcCCEEEEEcCC-----CEEEEEECCC-CcEeeeecc
Confidence 344544432 2469999998886 12211111 1111233467777766532 4899999876 777784432
Q ss_pred CCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 122 RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 122 ~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
... ........++.+++. ..+ ..++.++...
T Consensus 134 ~~~-~~~~p~v~~~~v~v~-~~~--g~l~a~d~~t 164 (377)
T TIGR03300 134 SSE-VLSPPLVANGLVVVR-TND--GRLTALDAAT 164 (377)
T ss_pred Cce-eecCCEEECCEEEEE-CCC--CeEEEEEcCC
Confidence 221 122333345555543 323 3467777653
No 424
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=55.05 E-value=31 Score=29.39 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=25.8
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCCc
Q 010654 326 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 376 (505)
Q Consensus 326 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~~ 376 (505)
+.+.++.+.++ .++|+++|.|..|.+.+.++...++.+.+++-..|.
T Consensus 57 l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 57 LREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 33344444444 378999999999998888888767778888777663
No 425
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=53.65 E-value=2.1e+02 Score=27.31 Aligned_cols=70 Identities=16% Similarity=-0.016 Sum_probs=38.8
Q ss_pred EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCcee-eEEEEeCC--EEEEEEe--cCCeeEEEEEEcC
Q 010654 82 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKL-QDIQLFID--HLAVYER--EGGLQKITTYRLP 155 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~d--~l~~~~~--~~~~~~l~~~~~~ 155 (505)
..+|.....++..++ |..-++++|..+..... .+....+.-+ +--.+++| .||.+.+ +.++..+-+|+..
T Consensus 11 a~~p~~~~avafaRR---PG~~~~v~D~~~g~~~~-~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 11 AAHPTRPEAVAFARR---PGTFALVFDCRTGQLLQ-RLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred eeCCCCCeEEEEEeC---CCcEEEEEEcCCCceee-EEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 467755555555444 22478889987733344 3443443323 33344555 4444443 2467789999976
No 426
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=52.62 E-value=1.7e+02 Score=29.96 Aligned_cols=94 Identities=5% Similarity=-0.005 Sum_probs=51.4
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeee-ccccceeEE--eeeeCCEEEEEEcCCCCCCceEEEeeCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDTA--ASHRGNHFFITRRSDELFNSELLACPVDNT 112 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~--~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 112 (505)
.++|.|+...|+|....+ +++-.+.-.. +.+. ...+|.... |++..+-|+ .. ++..+..+.|.-
T Consensus 150 c~~W~p~S~~vl~c~g~h----~~IKpL~~n~--k~i~WkAHDGiiL~~~W~~~s~lI~-sg----GED~kfKvWD~~-- 216 (737)
T KOG1524|consen 150 CARWAPNSNSIVFCQGGH----ISIKPLAANS--KIIRWRAHDGLVLSLSWSTQSNIIA-SG----GEDFRFKIWDAQ-- 216 (737)
T ss_pred EEEECCCCCceEEecCCe----EEEeeccccc--ceeEEeccCcEEEEeecCcccccee-ec----CCceeEEeeccc--
Confidence 356888888877765543 5555555432 2222 233465443 777655322 22 222355555533
Q ss_pred CCceEEEcCC-CCceeeEEEEeCCEEEEEEecC
Q 010654 113 SETTVLIPHR-ESVKLQDIQLFIDHLAVYEREG 144 (505)
Q Consensus 113 ~~~~~~~~~~-~~~~i~~~~~~~d~l~~~~~~~ 144 (505)
|.. +++.. .+..|.+++|.+|.++.+...+
T Consensus 217 G~~--Lf~S~~~ey~ITSva~npd~~~~v~S~n 247 (737)
T KOG1524|consen 217 GAN--LFTSAAEEYAITSVAFNPEKDYLLWSYN 247 (737)
T ss_pred Ccc--cccCChhccceeeeeeccccceeeeeee
Confidence 222 45433 3567899999999777765443
No 427
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=51.16 E-value=2e+02 Score=26.50 Aligned_cols=111 Identities=14% Similarity=0.201 Sum_probs=53.9
Q ss_pred EEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE-eee-eCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 34 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASH-RGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 34 ~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..+.+|.||.+.|+...+. ...|+.+++++.- ++.+.-.. -.++. +.- .+..+++...+. .+|+.+++..
T Consensus 24 ~SGLTy~pd~~tLfaV~d~--~~~i~els~~G~v-lr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~----~~L~~~~~~~ 95 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDE--PGEIYELSLDGKV-LRRIPLDG-FGDYEGITYLGNGRYVLSEERD----QRLYIFTIDD 95 (248)
T ss_dssp EEEEEEETTTTEEEEEETT--TTEEEEEETT--E-EEEEE-SS--SSEEEEEE-STTEEEEEETTT----TEEEEEEE--
T ss_pred ccccEEcCCCCeEEEEECC--CCEEEEEcCCCCE-EEEEeCCC-CCCceeEEEECCCEEEEEEcCC----CcEEEEEEec
Confidence 4578999998887665554 4678999986432 44432111 11122 221 334555555432 4888887743
Q ss_pred CCC----c---eEE--EcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEE
Q 010654 112 TSE----T---TVL--IPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYR 153 (505)
Q Consensus 112 ~~~----~---~~~--~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~ 153 (505)
.+. . +.- +....+.-+++++|+.. +++++ .+.....++-++
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~-kE~~P~~l~~~~ 147 (248)
T PF06977_consen 96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVA-KERKPKRLYEVN 147 (248)
T ss_dssp --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEE-EESSSEEEEEEE
T ss_pred cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEE-eCCCChhhEEEc
Confidence 111 1 111 12223445889999884 55554 444444444444
No 428
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=50.87 E-value=1.4e+02 Score=30.08 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=46.9
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 117 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 117 (505)
.+||....|+++.. -...|+++|....+...+|+-...-....|+++|-+|..-+. +++|+.||+.+...+ .
T Consensus 215 cfspsne~l~vsVG--~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s-----~G~~i~YD~R~~k~P-v 286 (673)
T KOG4378|consen 215 CFSPSNEALLVSVG--YDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNS-----KGELIAYDMRSTKAP-V 286 (673)
T ss_pred eecCCccceEEEec--ccceEEEeecccccccceeeecCCcceeeecCCceEEEeecC-----CceEEEEecccCCCC-c
Confidence 34444444443322 145688888776543344442221222348999976665433 359999999763222 2
Q ss_pred EEcCCCCceeeEEEEeCC
Q 010654 118 LIPHRESVKLQDIQLFID 135 (505)
Q Consensus 118 ~~~~~~~~~i~~~~~~~d 135 (505)
-+-+..+..+..++|-..
T Consensus 287 ~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 287 AVRSAHDASVTRVAFQPS 304 (673)
T ss_pred eEeeecccceeEEEeeec
Confidence 122222334566666544
No 429
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=50.37 E-value=1.5e+02 Score=32.48 Aligned_cols=129 Identities=9% Similarity=0.009 Sum_probs=64.3
Q ss_pred cceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCC---CCCCceEEEeeCCCCCCceEEEc-C----CCCc
Q 010654 54 ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD---ELFNSELLACPVDNTSETTVLIP-H----RESV 125 (505)
Q Consensus 54 ~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~-~----~~~~ 125 (505)
..+.||.+|++.|+-+..+.-..++....+.|+.+ +.-+++.. |-....|+++|..-.+ .. ++. . ....
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K-~aqlt~e~tflGls~n~lfriDpR~~~-~k-~v~~~~k~Y~~~~ 578 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSK-FAQLTNEQTFLGLSDNSLFRIDPRLSG-NK-LVDSQSKQYSSKN 578 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEeccccc-ccccCCCceEEEECCCceEEeccCCCC-Cc-eeeccccccccCC
Confidence 35789999999997112221122221223444432 11111110 1123488888865322 11 221 1 1123
Q ss_pred eeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc-ccccCCCceeeccCCeeeecCCCCcccCCEEEEEEec
Q 010654 126 KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP-LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 197 (505)
Q Consensus 126 ~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (505)
.++.++-++++-+.+....|. +.+|+-- |.. .+. +|..+..|-++..+.||+.++.+|.+
T Consensus 579 ~Fs~~aTt~~G~iavgs~~G~--IRLyd~~--g~~AKT~--------lp~lG~pI~~iDvt~DGkwilaTc~t 639 (794)
T PF08553_consen 579 NFSCFATTEDGYIAVGSNKGD--IRLYDRL--GKRAKTA--------LPGLGDPIIGIDVTADGKWILATCKT 639 (794)
T ss_pred CceEEEecCCceEEEEeCCCc--EEeeccc--chhhhhc--------CCCCCCCeeEEEecCCCcEEEEeecc
Confidence 456677777766666666654 5667632 221 122 23222224445678899999988774
No 430
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=49.62 E-value=3.3e+02 Score=28.45 Aligned_cols=65 Identities=9% Similarity=-0.003 Sum_probs=34.1
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCC-C---CceeeEEEEeCCEEEEEEecC---CeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-E---SVKLQDIQLFIDHLAVYEREG---GLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~d~l~~~~~~~---~~~~l~~~~~~~ 156 (505)
.+.++|+.+.. .+|+.+|.++ |+..|..... . ....+.....++.+++..... ....++.+++.+
T Consensus 119 ~~~~v~v~t~d-----g~l~ALDa~T-Gk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~T 190 (527)
T TIGR03075 119 YDGKVFFGTLD-----ARLVALDAKT-GKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKT 190 (527)
T ss_pred ECCEEEEEcCC-----CEEEEEECCC-CCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCC
Confidence 44566665432 4899999877 7787843311 1 111223444556655543311 134566666653
No 431
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=48.77 E-value=1.7e+02 Score=27.49 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=45.2
Q ss_pred EEEEECCCCCC-CC-eEEEEecCCceE---EEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE--E
Q 010654 10 AWLHKLEADQS-ND-ICLYHEKDDIYS---LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--A 82 (505)
Q Consensus 10 l~~~~lgt~~~-~~-~~~~~~~~~~~~---~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~--~ 82 (505)
+-+|+++.--. ++ ..||.+....|. +..+|||++++|-+-+. ...+|++|..+.. .....++..|... .
T Consensus 240 vrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~---dr~vyvwd~~~r~-~lyklpGh~gsvn~~~ 315 (338)
T KOG0265|consen 240 VRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSA---DRFVYVWDTTSRR-ILYKLPGHYGSVNEVD 315 (338)
T ss_pred EEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccc---cceEEEeeccccc-EEEEcCCcceeEEEee
Confidence 55666644322 23 567776655553 46789999998765433 3358899987754 4444455445432 3
Q ss_pred eeeeCC
Q 010654 83 ASHRGN 88 (505)
Q Consensus 83 ~s~dg~ 88 (505)
|.|.-.
T Consensus 316 Fhp~e~ 321 (338)
T KOG0265|consen 316 FHPTEP 321 (338)
T ss_pred ecCCCc
Confidence 666543
No 432
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=48.19 E-value=2.5e+02 Score=26.59 Aligned_cols=94 Identities=19% Similarity=0.218 Sum_probs=47.1
Q ss_pred CceEEEEECCCCCCCCeEEEEecC-----CceEEEEEEeC-CC----cEEEEEeccccceEEEEEeCCCCCceeeeeccc
Q 010654 7 PDKAWLHKLEADQSNDICLYHEKD-----DIYSLGLQASE-SK----KFLFIASESKITRFVFYLDVSKPEELRVLTPRV 76 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~~~-----~~~~~~~~~Sp-Dg----~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~ 76 (505)
|-+|+.+||.|++ ....+.-++ ..+..+++... ++ .+++++ ... ...|.++|+.+++ .+++....
T Consensus 33 ~pKLv~~Dl~t~~--li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYIt-D~~-~~glIV~dl~~~~-s~Rv~~~~ 107 (287)
T PF03022_consen 33 PPKLVAFDLKTNQ--LIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYIT-DSG-GPGLIVYDLATGK-SWRVLHNS 107 (287)
T ss_dssp --EEEEEETTTTC--EEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEE-ETT-TCEEEEEETTTTE-EEEEETCG
T ss_pred CcEEEEEECCCCc--EEEEEECChHHcccccccceEEEEccCCCCcceEEEEe-CCC-cCcEEEEEccCCc-EEEEecCC
Confidence 5689999998864 333333221 23444555433 11 344333 222 3378889998886 33332110
Q ss_pred --------------------cce---eE-EeeeeCCEEEEEEcCCCCCCceEEEeeC
Q 010654 77 --------------------VGV---DT-AASHRGNHFFITRRSDELFNSELLACPV 109 (505)
Q Consensus 77 --------------------~~~---~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 109 (505)
+|. .. ..++||++|||..-.+ .++|.++.
T Consensus 108 ~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss----~~ly~v~T 160 (287)
T PF03022_consen 108 FSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS----RKLYRVPT 160 (287)
T ss_dssp CTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-----SEEEEEEH
T ss_pred cceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC----CcEEEEEH
Confidence 111 01 1355888888887542 37887774
No 433
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=48.17 E-value=2e+02 Score=28.74 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=18.9
Q ss_pred EEcCCCCceeeEEEEeC-CEEEEEEecCCe
Q 010654 118 LIPHRESVKLQDIQLFI-DHLAVYEREGGL 146 (505)
Q Consensus 118 ~~~~~~~~~i~~~~~~~-d~l~~~~~~~~~ 146 (505)
+++-..+..+..+..++ ++.+|+.+++|.
T Consensus 211 Llti~fp~si~av~lDpae~~~yiGt~~G~ 240 (476)
T KOG0646|consen 211 LLTITFPSSIKAVALDPAERVVYIGTEEGK 240 (476)
T ss_pred eEEEecCCcceeEEEcccccEEEecCCcce
Confidence 44445566777887777 466777666664
No 434
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=47.96 E-value=2.1e+02 Score=30.64 Aligned_cols=112 Identities=17% Similarity=0.124 Sum_probs=0.0
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
++-.+.+..||||+++++..-+. +-.+|.+|.=.-- +.+--+...-....+|||++-++=-+.+ .+-+++=+|..
T Consensus 508 ~ddvL~v~~Spdgk~LaVsLLdn-TVkVyflDtlKFf-lsLYGHkLPV~smDIS~DSklivTgSAD---KnVKiWGLdFG 582 (888)
T KOG0306|consen 508 EDDVLCVSVSPDGKLLAVSLLDN-TVKVYFLDTLKFF-LSLYGHKLPVLSMDISPDSKLIVTGSAD---KNVKIWGLDFG 582 (888)
T ss_pred cccEEEEEEcCCCcEEEEEeccC-eEEEEEecceeee-eeecccccceeEEeccCCcCeEEeccCC---CceEEeccccc
Q ss_pred CCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEE
Q 010654 111 NTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKIT 150 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~ 150 (505)
+ .-.. +++++.-.---.+.+ .++++|++.+++.-+.|
T Consensus 583 D-CHKS-~fAHdDSvm~V~F~P-~~~~FFt~gKD~kvKqW 619 (888)
T KOG0306|consen 583 D-CHKS-FFAHDDSVMSVQFLP-KTHLFFTCGKDGKVKQW 619 (888)
T ss_pred h-hhhh-hhcccCceeEEEEcc-cceeEEEecCcceEEee
No 435
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.90 E-value=79 Score=35.08 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=76.9
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceE-EEEEEeCCCcEEEEEecccc-ceEEEEEeCCCCC-ceeeeeccccceeE-Eee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYS-LGLQASESKKFLFIASESKI-TRFVFYLDVSKPE-ELRVLTPRVVGVDT-AAS 84 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~-~~~~~SpDg~~i~~~~~~~~-~~~l~~~d~~~~~-~~~~l~~~~~~~~~-~~s 84 (505)
++-+|||.-. +.+.=+.+...+.. ..+.|.||+..-++..+..+ .--|-+.|+.-.. .++.++.++.|... .|.
T Consensus 185 ~~~iWDlr~~--~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc 262 (1049)
T KOG0307|consen 185 RAVIWDLRKK--KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWC 262 (1049)
T ss_pred CceeccccCC--CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccC
Confidence 5778998654 22322333333333 36789999987555555443 3344555543322 26667777777664 499
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~ 155 (505)
+.+.++.+.+-.+ .+++..+.++ ++.---++...+ .+.++.|.+. .++-+...+|.. -+|.+.
T Consensus 263 ~~D~~lllSsgkD----~~ii~wN~~t-gEvl~~~p~~~n-W~fdv~w~pr~P~~~A~asfdgkI--~I~sl~ 327 (1049)
T KOG0307|consen 263 PQDPRLLLSSGKD----NRIICWNPNT-GEVLGELPAQGN-WCFDVQWCPRNPSVMAAASFDGKI--SIYSLQ 327 (1049)
T ss_pred CCCchhhhcccCC----CCeeEecCCC-ceEeeecCCCCc-ceeeeeecCCCcchhhhheeccce--eeeeee
Confidence 9888888777543 3777777665 321112333222 3456777764 345455555554 445554
No 436
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=47.76 E-value=2.6e+02 Score=26.70 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=56.2
Q ss_pred EEEEEeCCCcEEEEEeccccceEEEEEe-CCCCCceeeee---ccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 35 LGLQASESKKFLFIASESKITRFVFYLD-VSKPEELRVLT---PRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~~~~~l~~~d-~~~~~~~~~l~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
.+.++|.||++++-.+. ...-.||-++ .... +-+.+- +........|+||-+.+++.--. + ..|+++-+.
T Consensus 90 t~~~FsSdGK~lat~~~-Dr~Ir~w~~~DF~~~-eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~-g---~~l~vyk~~ 163 (420)
T KOG2096|consen 90 TDVAFSSDGKKLATISG-DRSIRLWDVRDFENK-EHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKR-G---NKLCVYKLV 163 (420)
T ss_pred eeeEEcCCCceeEEEeC-CceEEEEecchhhhh-hhhHhhccccCCCceEEEECCCcceEEEEEcc-C---CEEEEEEee
Confidence 36789999999764433 2233455442 2222 122221 21222233488998887777543 2 255555442
Q ss_pred C--CCC-----ceE---EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 111 N--TSE-----TTV---LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 111 ~--~~~-----~~~---~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
. -|. ..| .+...-...+-++-..++..++.....+ ..+.+|++.
T Consensus 164 K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~d-t~i~lw~lk 217 (420)
T KOG2096|consen 164 KKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLD-TKICLWDLK 217 (420)
T ss_pred ecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCC-CcEEEEecC
Confidence 1 111 112 1222222334455555666666554443 457788876
No 437
>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]
Probab=47.70 E-value=73 Score=31.07 Aligned_cols=94 Identities=14% Similarity=0.062 Sum_probs=49.4
Q ss_pred EEEEEeC---------CCCCceeeeeccccceeE------EeeeeCCEEEEEEcCC-------------CCCCceEEEee
Q 010654 57 FVFYLDV---------SKPEELRVLTPRVVGVDT------AASHRGNHFFITRRSD-------------ELFNSELLACP 108 (505)
Q Consensus 57 ~l~~~d~---------~~~~~~~~l~~~~~~~~~------~~s~dg~~l~~~~~~~-------------~~~~~~l~~~~ 108 (505)
+||++|+ +++. .+.+....+|... .+++ .+.+||..... +.+.+||+++|
T Consensus 128 dL~VaDAYlGL~~V~p~g~~-a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~a~l~g~~~GRl~~YD 205 (376)
T KOG1520|consen 128 DLYVADAYLGLLKVGPEGGL-AELLADEAEGKPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVFAALEGDPTGRLFRYD 205 (376)
T ss_pred eEEEEecceeeEEECCCCCc-ceeccccccCeeeeecCceeEcC-CCeEEEeccccccchhheEEeeecCCCccceEEec
Confidence 6666664 4443 5555555555322 2555 45667765432 23557888888
Q ss_pred CCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcC
Q 010654 109 VDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
..+ ...+ ++-.... ...+++.++|+-++.+.+-+..++.-|-++
T Consensus 206 ~~t-K~~~-VLld~L~-F~NGlaLS~d~sfvl~~Et~~~ri~rywi~ 249 (376)
T KOG1520|consen 206 PST-KVTK-VLLDGLY-FPNGLALSPDGSFVLVAETTTARIKRYWIK 249 (376)
T ss_pred Ccc-cchh-hhhhccc-ccccccCCCCCCEEEEEeeccceeeeeEec
Confidence 765 3333 2322222 234666777654444444444555555555
No 438
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=47.62 E-value=1.3e+02 Score=30.48 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=60.3
Q ss_pred EEEEECCCCC-CCCeEEEEec-CCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceee---eeccccc-eeEEe
Q 010654 10 AWLHKLEADQ-SNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPRVVG-VDTAA 83 (505)
Q Consensus 10 l~~~~lgt~~-~~~~~~~~~~-~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~---l~~~~~~-~~~~~ 83 (505)
|-+||+.... +..+.-+.-- ...|.-+...+|||+.|++-.- .+.|-+.|++... ++. |+..... ....+
T Consensus 442 VKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGe---astlsiWDLAapT-prikaeltssapaCyALa~ 517 (705)
T KOG0639|consen 442 VKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGE---ASTLSIWDLAAPT-PRIKAELTSSAPACYALAI 517 (705)
T ss_pred EEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccc---cceeeeeeccCCC-cchhhhcCCcchhhhhhhc
Confidence 5567774331 2222222211 2335557889999999876432 4556777887765 332 2211111 11238
Q ss_pred eeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCC
Q 010654 84 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 135 (505)
Q Consensus 84 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d 135 (505)
|||.+ +.|....++ .|.+.|+-+....+ .+....|. .+.++.++|
T Consensus 518 spDak-vcFsccsdG----nI~vwDLhnq~~Vr-qfqGhtDG-ascIdis~d 562 (705)
T KOG0639|consen 518 SPDAK-VCFSCCSDG----NIAVWDLHNQTLVR-QFQGHTDG-ASCIDISKD 562 (705)
T ss_pred CCccc-eeeeeccCC----cEEEEEcccceeee-cccCCCCC-ceeEEecCC
Confidence 99875 566665543 56777876522222 33333343 455666655
No 439
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=46.57 E-value=4e+02 Score=28.69 Aligned_cols=38 Identities=16% Similarity=0.023 Sum_probs=24.8
Q ss_pred ceEEEEECCCCCCCCeEEEEecC-CceEEEEEEeCCCcEEEEEe
Q 010654 8 DKAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFIAS 50 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~-~~~~~~~~~SpDg~~i~~~~ 50 (505)
.+|-+|.+-. . .|....| .++...+..+|||++.++-.
T Consensus 432 ~KvRiWsI~d----~-~Vv~W~Dl~~lITAvcy~PdGk~avIGt 470 (712)
T KOG0283|consen 432 GKVRLWSISD----K-KVVDWNDLRDLITAVCYSPDGKGAVIGT 470 (712)
T ss_pred cceEEeecCc----C-eeEeehhhhhhheeEEeccCCceEEEEE
Confidence 4678888833 2 2333334 34555788999999987764
No 440
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=46.53 E-value=17 Score=37.14 Aligned_cols=46 Identities=20% Similarity=0.291 Sum_probs=40.4
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCCC
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 473 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 473 (505)
+.||+-|+...-|+.. ..+..|+.+|+.+|.++.+-+++ +-.|++.
T Consensus 786 qLPp~~i~ac~mDP~L--DD~vmfA~kLr~lG~~v~l~vle---~lPHGFL 831 (880)
T KOG4388|consen 786 QLPPVHIVACAMDPML--DDSVMFARKLRNLGQPVTLRVLE---DLPHGFL 831 (880)
T ss_pred cCCCceEEEeccCcch--hHHHHHHHHHHhcCCceeehhhh---cCCccce
Confidence 6788999999999987 78999999999999999888888 6788763
No 441
>PLN02847 triacylglycerol lipase
Probab=46.37 E-value=16 Score=37.81 Aligned_cols=21 Identities=29% Similarity=0.275 Sum_probs=17.1
Q ss_pred CcEEEEeeChHHHHHHHHHhh
Q 010654 342 EKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~ 362 (505)
-+|.|.|||+||.+++.++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999988776543
No 442
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=46.17 E-value=3.3e+02 Score=27.47 Aligned_cols=102 Identities=4% Similarity=0.092 Sum_probs=47.2
Q ss_pred CceEEEEECCCCCCCCeEEEEe-cCCc--eEEEEEEeCCCcEEEEEeccccceEEEEEeC-CCCC-ceee---eeccc--
Q 010654 7 PDKAWLHKLEADQSNDICLYHE-KDDI--YSLGLQASESKKFLFIASESKITRFVFYLDV-SKPE-ELRV---LTPRV-- 76 (505)
Q Consensus 7 ~~~l~~~~lgt~~~~~~~~~~~-~~~~--~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~-~~~~-~~~~---l~~~~-- 76 (505)
-++|.+||+.+. +.+..+.- .+.. ..+.+.+.|+..+=++... ..+.||++-- +++. +.+. +.+..
T Consensus 221 G~~l~vWD~~~r--~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~a--Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~ 296 (461)
T PF05694_consen 221 GHSLHVWDWSTR--KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCA--LSSSIWRFYKDDDGEWAAEKVIDIPAKKVE 296 (461)
T ss_dssp --EEEEEETTTT--EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE----EEEEEEEE-ETTEEEEEEEEEE--EE--
T ss_pred cCeEEEEECCCC--cEeeEEecCCCCCceEEEEecCCCCccceEEEEe--ccceEEEEEEcCCCCeeeeEEEECCCcccC
Confidence 467999999764 33444432 2222 2345556777776444332 4556776643 3333 1111 11110
Q ss_pred --------------cc--eeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCce
Q 010654 77 --------------VG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT 116 (505)
Q Consensus 77 --------------~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 116 (505)
.+ .+..+|.|.+.||+..-.. +.+-.+|+..+..++
T Consensus 297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~----GdvrqYDISDP~~Pk 348 (461)
T PF05694_consen 297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLH----GDVRQYDISDPFNPK 348 (461)
T ss_dssp SS---GGGGGG-EE------EEE-TTS-EEEEEETTT----TEEEEEE-SSTTS-E
T ss_pred cccccccccccccCCCceEeEEEccCCCEEEEEcccC----CcEEEEecCCCCCCc
Confidence 01 1234899999999887653 367778887644443
No 443
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=45.78 E-value=29 Score=34.20 Aligned_cols=103 Identities=22% Similarity=0.189 Sum_probs=66.5
Q ss_pred CCcEEEEEcCCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCc---hhHHHcccccCCcchHHHHHHHHHHHHHcCC
Q 010654 262 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG---RQWYENGKFLKKKNTFTDFIACAEYLIKNCY 338 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g---~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 338 (505)
..|+|++.- |++....+... +...|.+ -.-+.+.+|--+.+- .+|.. ....+...|...+++.++.-
T Consensus 62 drPtV~~T~-GY~~~~~p~r~-Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~----Lti~QAA~D~Hri~~A~K~i-- 131 (448)
T PF05576_consen 62 DRPTVLYTE-GYNVSTSPRRS-EPTQLLD--GNQLSVEHRFFGPSRPEPADWSY----LTIWQAASDQHRIVQAFKPI-- 131 (448)
T ss_pred CCCeEEEec-CcccccCcccc-chhHhhc--cceEEEEEeeccCCCCCCCCccc----ccHhHhhHHHHHHHHHHHhh--
Confidence 469988874 45554444433 2223333 356677888655432 23432 22225678888888888653
Q ss_pred CCCCcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 339 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 339 ~d~~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
=+.|-.-.|.|=||..++..=..+|+-..+.|+.+.
T Consensus 132 -Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 132 -YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred -ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 256777899999999988888889998888887643
No 444
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=45.60 E-value=2.7e+02 Score=30.19 Aligned_cols=56 Identities=11% Similarity=0.170 Sum_probs=36.1
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-E-EeeeeCCEEEEEEcC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T-AASHRGNHFFITRRS 96 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~~~~ 96 (505)
..+||+||.+|+ + ...-..+-+.-+++++ +++.|+-.... + .+|||+........+
T Consensus 256 ~L~fS~~G~~Ll-S--GG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~D 313 (792)
T KOG1963|consen 256 SLSFSSDGAYLL-S--GGREGVLVLWQLETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLED 313 (792)
T ss_pred eeEEecCCceEe-e--cccceEEEEEeecCCC--cccccccCCeeEEEEEcCCCCeEEEEecC
Confidence 578999999875 2 2223445556666764 55666664433 3 399999987777643
No 445
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=45.27 E-value=1.9e+02 Score=30.81 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=35.4
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccc----cc-eeEEeeeeCCEEEEEEcC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV----VG-VDTAASHRGNHFFITRRS 96 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~----~~-~~~~~s~dg~~l~~~~~~ 96 (505)
++||++|+.|+-.. .+.|-.+|++++. .. +.... +. ..+.++||++.|+...+.
T Consensus 25 ~~~s~nG~~L~t~~----~d~Vi~idv~t~~-~~-l~s~~~ed~d~ita~~l~~d~~~L~~a~rs 83 (775)
T KOG0319|consen 25 VAWSSNGQHLYTAC----GDRVIIIDVATGS-IA-LPSGSNEDEDEITALALTPDEEVLVTASRS 83 (775)
T ss_pred eeECCCCCEEEEec----CceEEEEEccCCc-ee-cccCCccchhhhheeeecCCccEEEEeecc
Confidence 78999999875433 2457889999886 32 22111 11 124599999988888754
No 446
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=45.13 E-value=2.1e+02 Score=29.09 Aligned_cols=57 Identities=11% Similarity=0.124 Sum_probs=30.7
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccc--eeEEeeeeCCEEEEEEcC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRS 96 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~ 96 (505)
-.+.||||.++++.+.+. .--||.++.++.+ ..++-..... ....||+|++. +.++.
T Consensus 452 ~v~ysp~G~~lAvgs~d~-~iyiy~Vs~~g~~-y~r~~k~~gs~ithLDwS~Ds~~--~~~~S 510 (626)
T KOG2106|consen 452 VVRYSPDGAFLAVGSHDN-HIYIYRVSANGRK-YSRVGKCSGSPITHLDWSSDSQF--LVSNS 510 (626)
T ss_pred EEEEcCCCCEEEEecCCC-eEEEEEECCCCcE-EEEeeeecCceeEEeeecCCCce--EEecc
Confidence 357899999988754332 2234555554443 3333322211 11349999984 45554
No 447
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=44.72 E-value=2.4e+02 Score=27.33 Aligned_cols=56 Identities=14% Similarity=0.317 Sum_probs=38.4
Q ss_pred CCCceEEEEECCCCCCCCeEEEE-ecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC
Q 010654 5 LRPDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 67 (505)
Q Consensus 5 ~r~~~l~~~~lgt~~~~~~~~~~-~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~ 67 (505)
-|...+-+||+.|+ ..+++ .....|..+..+||-|+||+-... ...|.+.|+.+++
T Consensus 311 SrDktIk~wdv~tg----~cL~tL~ghdnwVr~~af~p~Gkyi~ScaD---Dktlrvwdl~~~~ 367 (406)
T KOG0295|consen 311 SRDKTIKIWDVSTG----MCLFTLVGHDNWVRGVAFSPGGKYILSCAD---DKTLRVWDLKNLQ 367 (406)
T ss_pred cccceEEEEeccCC----eEEEEEecccceeeeeEEcCCCeEEEEEec---CCcEEEEEeccce
Confidence 46667889999886 35555 334558889999999999864332 3346667777654
No 448
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=43.84 E-value=35 Score=34.22 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=46.4
Q ss_pred ceEEEEECCCCCCCCeEEEEecC---CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEE-e
Q 010654 8 DKAWLHKLEADQSNDICLYHEKD---DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-A 83 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~---~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~ 83 (505)
+.|-+|||.+... .|-.+-. +.- ...+.|||.+. +|..-+. ..|-++|+.+...++.+....+|...- +
T Consensus 487 stlsiWDLAapTp---rikaeltssapaC-yALa~spDakv-cFsccsd--GnI~vwDLhnq~~VrqfqGhtDGascIdi 559 (705)
T KOG0639|consen 487 STLSIWDLAAPTP---RIKAELTSSAPAC-YALAISPDAKV-CFSCCSD--GNIAVWDLHNQTLVRQFQGHTDGASCIDI 559 (705)
T ss_pred ceeeeeeccCCCc---chhhhcCCcchhh-hhhhcCCccce-eeeeccC--CcEEEEEcccceeeecccCCCCCceeEEe
Confidence 4577889877532 2222211 110 13468999985 4554433 346667776654477787777776543 8
Q ss_pred eeeCCEEE
Q 010654 84 SHRGNHFF 91 (505)
Q Consensus 84 s~dg~~l~ 91 (505)
|+||..||
T Consensus 560 s~dGtklW 567 (705)
T KOG0639|consen 560 SKDGTKLW 567 (705)
T ss_pred cCCCceee
Confidence 99998877
No 449
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=43.68 E-value=39 Score=34.49 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=25.4
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHH
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLR 451 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~ 451 (505)
..+ |||.+|+.|..|++..++++.++|+
T Consensus 364 gik-VLiYnGd~D~icn~~Gt~~wi~~L~ 391 (462)
T PTZ00472 364 GVR-VMIYAGDMDFICNWIGNKAWTLALQ 391 (462)
T ss_pred Cce-EEEEECCcCeecCcHhHHHHHHhCC
Confidence 355 9999999999999999999999886
No 450
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=42.34 E-value=2.9e+02 Score=27.18 Aligned_cols=52 Identities=12% Similarity=-0.002 Sum_probs=28.5
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEE
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAV 139 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~ 139 (505)
..|+||+..+..-+-+ ..++..|+.. |...-.+... ...+..++|++-..++
T Consensus 129 L~Ws~d~~~l~s~s~d-----ns~~l~Dv~~-G~l~~~~~dh-~~yvqgvawDpl~qyv 180 (434)
T KOG1009|consen 129 LAWSPDSNFLVSGSVD-----NSVRLWDVHA-GQLLAILDDH-EHYVQGVAWDPLNQYV 180 (434)
T ss_pred hhccCCCceeeeeecc-----ceEEEEEecc-ceeEeecccc-ccccceeecchhhhhh
Confidence 4599999877766543 2566677654 3221122222 2235677787744443
No 451
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=42.08 E-value=4.4e+02 Score=27.79 Aligned_cols=37 Identities=22% Similarity=0.210 Sum_probs=29.5
Q ss_pred EEEEeeChHHHHHHHHHhhCCC-ceeEEEecCCchhhh
Q 010654 344 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPFVDVL 380 (505)
Q Consensus 344 v~i~G~S~GG~~~~~~~~~~p~-~~~a~v~~~~~~d~~ 380 (505)
|...+.|.||..++.++.+..+ ++.+++..-|-+++.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 5556888999999999987654 788998888877653
No 452
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.76 E-value=2.4e+02 Score=27.68 Aligned_cols=67 Identities=10% Similarity=0.087 Sum_probs=36.4
Q ss_pred eeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEE
Q 010654 69 LRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 69 ~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~ 141 (505)
.++...+.++... .+|+||+.+++-+++ + .+..++......-. .+.+.-...+.++..++|.-+...
T Consensus 274 ~~~~~~~~~siSsl~VS~dGkf~AlGT~d-G----sVai~~~~~lq~~~-~vk~aH~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 274 LRKKIKRFKSISSLAVSDDGKFLALGTMD-G----SVAIYDAKSLQRLQ-YVKEAHLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred hhhhhhccCcceeEEEcCCCcEEEEeccC-C----cEEEEEeceeeeeE-eehhhheeeeeeEEEcCCcCcccc
Confidence 4444444434433 499999999988875 3 34444543311111 333333335677777777544443
No 453
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=41.75 E-value=56 Score=31.02 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhh
Q 010654 322 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 362 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~ 362 (505)
-..-+..|..+|+.+... .++|.++|+|-|+|.+-.+|++
T Consensus 103 L~~nI~~AYrFL~~~yep-GD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 103 LVQNIREAYRFLIFNYEP-GDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHHhcCC-CCeEEEeeccchhHHHHHHHHH
Confidence 456778889999887432 4799999999999988777665
No 454
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=41.62 E-value=1.8e+02 Score=27.35 Aligned_cols=86 Identities=14% Similarity=0.010 Sum_probs=52.5
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCc-EEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-Eeee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKK-FLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASH 85 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~-~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~ 85 (505)
+.|-.||.-|.| ....|.. ++...+-+|||=.. ..++. ...+...|-+.|+++|.-...|..+.+++.. .|||
T Consensus 124 htlKVWDtnTlQ--~a~~F~m--e~~VYshamSp~a~sHcLiA-~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp 198 (397)
T KOG4283|consen 124 HTLKVWDTNTLQ--EAVDFKM--EGKVYSHAMSPMAMSHCLIA-AGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSP 198 (397)
T ss_pred ceEEEeecccce--eeEEeec--CceeehhhcChhhhcceEEE-EecCCCcEEEEeccCCcceeeeccccCceEEEEecc
Confidence 347788877754 3334443 22333446888444 22222 2234567999999999734556665556553 5999
Q ss_pred eCCEEEEEEcCCC
Q 010654 86 RGNHFFITRRSDE 98 (505)
Q Consensus 86 dg~~l~~~~~~~~ 98 (505)
..+++.+....++
T Consensus 199 ~~e~vLatgsaDg 211 (397)
T KOG4283|consen 199 SSEWVLATGSADG 211 (397)
T ss_pred CceeEEEecCCCc
Confidence 9998888776543
No 455
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=41.55 E-value=3.5e+02 Score=26.52 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=42.1
Q ss_pred EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 81 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 81 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..||||++. +++.++++ .-++-.++.. +....|.+++... ++.++..+++.++.. .|-..+++|++..
T Consensus 157 VavS~D~~~-IitaDRDE--kIRvs~ypa~-f~IesfclGH~eF--VS~isl~~~~~LlS~--sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 157 VAVSPDDQF-IITADRDE--KIRVSRYPAT-FVIESFCLGHKEF--VSTISLTDNYLLLSG--SGDKTLRLWDITS 224 (390)
T ss_pred eeecCCCCE-EEEecCCc--eEEEEecCcc-cchhhhccccHhh--eeeeeeccCceeeec--CCCCcEEEEeccc
Confidence 349999954 45555543 3455555532 2345567776655 577888888774443 3445688888864
No 456
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=41.38 E-value=2.4e+02 Score=32.10 Aligned_cols=98 Identities=10% Similarity=0.088 Sum_probs=57.2
Q ss_pred EEEEEeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccce--eEEeeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 35 LGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 35 ~~~~~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
..+.|--||.+++++.-.. +...+-+.|-+ |. +........+. ...|-|.|..++-..... .. ..+..+.-.
T Consensus 199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~-Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~-sd-~~IvffErN 274 (1265)
T KOG1920|consen 199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GA-LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKT-SD-SDIVFFERN 274 (1265)
T ss_pred ceEEEccCCcEEEEEEEeccCCceeEEEeccc-ch-hhcccCcccccccceeecCCCCeEeeeeecC-CC-CcEEEEecC
Confidence 3478999999988875332 33556666666 43 33333222232 245889888887776542 22 367777776
Q ss_pred CCCCceEEEcCCCCce-eeEEEEeCCE
Q 010654 111 NTSETTVLIPHRESVK-LQDIQLFIDH 136 (505)
Q Consensus 111 ~~~~~~~~~~~~~~~~-i~~~~~~~d~ 136 (505)
|.......++...+.. +..+.|..+.
T Consensus 275 GL~hg~f~l~~p~de~~ve~L~Wns~s 301 (1265)
T KOG1920|consen 275 GLRHGEFVLPFPLDEKEVEELAWNSNS 301 (1265)
T ss_pred CccccccccCCcccccchheeeecCCC
Confidence 5332222344444444 6788887653
No 457
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=41.20 E-value=66 Score=30.95 Aligned_cols=28 Identities=21% Similarity=0.335 Sum_probs=25.6
Q ss_pred CCeEEEEccCCCCCCCCChHHHHHHHHHh
Q 010654 424 YPHILVTAGLNDPRVMYSEPAKFVAKLRE 452 (505)
Q Consensus 424 ~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~ 452 (505)
.+ |||..|..|..|++..++++.++|+-
T Consensus 234 i~-VliY~Gd~D~icn~~g~~~wi~~L~w 261 (319)
T PLN02213 234 YR-SLIYSGDHDIAVPFLATQAWIRSLNY 261 (319)
T ss_pred ce-EEEEECCcCeeCCcHhHHHHHHhcCC
Confidence 54 99999999999999999999999973
No 458
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=40.30 E-value=67 Score=32.54 Aligned_cols=62 Identities=24% Similarity=0.307 Sum_probs=41.8
Q ss_pred CCeEEEEccCCCCCCCCChHHHHHHHHHhcCCC---------------------CCeEEEEecCCCCCCCCCChHHHHHH
Q 010654 424 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD---------------------DNILLFKCELGAGHFSKSGRFERLRE 482 (505)
Q Consensus 424 ~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~---------------------~~~~~~~~~~~~gH~~~~~~~~~~~~ 482 (505)
++ +||..|+.|.+||+..++.+.++|.-..+. ..++... |+||..+..++....
T Consensus 364 ~r-vliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVr---GaGH~VP~~~p~~al- 438 (454)
T KOG1282|consen 364 YR-VLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVR---GAGHMVPYDKPESAL- 438 (454)
T ss_pred eE-EEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEe---CCcccCCCCCcHHHH-
Confidence 65 999999999999999999998888643221 1223344 899987766655332
Q ss_pred HHHHHHHHH
Q 010654 483 AAFTYTFLM 491 (505)
Q Consensus 483 ~~~~~~fl~ 491 (505)
.....|+.
T Consensus 439 -~m~~~fl~ 446 (454)
T KOG1282|consen 439 -IMFQRFLN 446 (454)
T ss_pred -HHHHHHHc
Confidence 23444553
No 459
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=40.16 E-value=24 Score=27.65 Aligned_cols=16 Identities=13% Similarity=0.083 Sum_probs=14.2
Q ss_pred EEeCCCcEEEEEeccc
Q 010654 38 QASESKKFLFIASESK 53 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~ 53 (505)
.|||||++|.|+-+..
T Consensus 74 vfSpDG~~lSFTYNDh 89 (122)
T PF12566_consen 74 VFSPDGSWLSFTYNDH 89 (122)
T ss_pred EECCCCCEEEEEecch
Confidence 7999999999998764
No 460
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=39.77 E-value=2.8e+02 Score=24.88 Aligned_cols=97 Identities=6% Similarity=0.156 Sum_probs=56.1
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC-
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTS- 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~- 113 (505)
.+...|.||.++ +....+...++|+.++.-++.+-+....+.. .|||-. -|+++.. ....|-+.|+.+--
T Consensus 236 av~vdpsgrll~---sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a--~yllt~s---yd~~ikltdlqgdla 307 (350)
T KOG0641|consen 236 AVAVDPSGRLLA---SGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGA--HYLLTCS---YDMKIKLTDLQGDLA 307 (350)
T ss_pred EEEECCCcceee---eccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCc--eEEEEec---ccceEEEeecccchh
Confidence 467889998764 3334566788888887623334454433333 388853 3444432 22578888887511
Q ss_pred --CceEEEcCCCCceeeEEEEeCCEEEEEE
Q 010654 114 --ETTVLIPHRESVKLQDIQLFIDHLAVYE 141 (505)
Q Consensus 114 --~~~~~~~~~~~~~i~~~~~~~d~l~~~~ 141 (505)
-+..++.+..+..| ...|-+..+-|+.
T Consensus 308 ~el~~~vv~ehkdk~i-~~rwh~~d~sfis 336 (350)
T KOG0641|consen 308 HELPIMVVAEHKDKAI-QCRWHPQDFSFIS 336 (350)
T ss_pred hcCceEEEEeccCceE-EEEecCccceeee
Confidence 12226777777655 5677765544443
No 461
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=39.61 E-value=3.4e+02 Score=25.84 Aligned_cols=88 Identities=11% Similarity=0.080 Sum_probs=49.3
Q ss_pred CCceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccc-ceeEE--
Q 010654 6 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTA-- 82 (505)
Q Consensus 6 r~~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~-- 82 (505)
+.-+|=+.+|.......+.+....+.+.. -.+.+-+|..|+-.+. ..+=|.+.|..+|..+..+-.+.+ ...|.
T Consensus 157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Ia-cv~Ln~~Gt~vATaSt--kGTLIRIFdt~~g~~l~E~RRG~d~A~iy~ia 233 (346)
T KOG2111|consen 157 KTGQVQIVDLASTKPNAPSIINAHDSDIA-CVALNLQGTLVATAST--KGTLIRIFDTEDGTLLQELRRGVDRADIYCIA 233 (346)
T ss_pred ccceEEEEEhhhcCcCCceEEEcccCcee-EEEEcCCccEEEEecc--CcEEEEEEEcCCCcEeeeeecCCchheEEEEE
Confidence 44567777776542222334433232222 3568899987653322 234466678888862222222221 22343
Q ss_pred eeeeCCEEEEEEcC
Q 010654 83 ASHRGNHFFITRRS 96 (505)
Q Consensus 83 ~s~dg~~l~~~~~~ 96 (505)
||||+.+|+..++.
T Consensus 234 FSp~~s~LavsSdK 247 (346)
T KOG2111|consen 234 FSPNSSWLAVSSDK 247 (346)
T ss_pred eCCCccEEEEEcCC
Confidence 99999999999875
No 462
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=38.19 E-value=4.5e+02 Score=26.79 Aligned_cols=135 Identities=12% Similarity=0.067 Sum_probs=73.5
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeec--c-ccceeEEeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--R-VVGVDTAASH 85 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~~s~ 85 (505)
.|.+|.+.|+++.. -|..+..+-.--++.||..|+++...+. +.-|.++|+.+.. +.--.. + .......|||
T Consensus 144 diiih~~~t~~~tt--~f~~~sgqsvRll~ys~skr~lL~~asd--~G~VtlwDv~g~s-p~~~~~~~HsAP~~gicfsp 218 (673)
T KOG4378|consen 144 DIIIHGTKTKQKTT--TFTIDSGQSVRLLRYSPSKRFLLSIASD--KGAVTLWDVQGMS-PIFHASEAHSAPCRGICFSP 218 (673)
T ss_pred cEEEEecccCcccc--ceecCCCCeEEEeecccccceeeEeecc--CCeEEEEeccCCC-cccchhhhccCCcCcceecC
Confidence 36778877765422 2222222222245678888877655443 4556777776543 211111 1 1111235888
Q ss_pred eCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 86 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 86 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
-...|++.-.. + .+|+.+|........-+... ..++.++..+++-++++-. .+.+++.|++..
T Consensus 219 sne~l~vsVG~---D-kki~~yD~~s~~s~~~l~y~---~Plstvaf~~~G~~L~aG~-s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 219 SNEALLVSVGY---D-KKINIYDIRSQASTDRLTYS---HPLSTVAFSECGTYLCAGN-SKGELIAYDMRS 281 (673)
T ss_pred CccceEEEecc---c-ceEEEeecccccccceeeec---CCcceeeecCCceEEEeec-CCceEEEEeccc
Confidence 88777666433 2 49999998642222213332 3466777788765555432 335688899863
No 463
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=37.83 E-value=4.7e+02 Score=28.26 Aligned_cols=136 Identities=7% Similarity=-0.011 Sum_probs=69.6
Q ss_pred ceEEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC-ceeeeeccccceeE--Eee
Q 010654 8 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDT--AAS 84 (505)
Q Consensus 8 ~~l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~--~~s 84 (505)
.-+-.||++.. +....|.. +-+-.-++.|||---..+++.. +..-|.+.|+.-.. -.++++.+. |..+ .|+
T Consensus 156 g~vK~~DlR~~--~S~~t~~~-nSESiRDV~fsp~~~~~F~s~~--dsG~lqlWDlRqp~r~~~k~~AH~-GpV~c~nwh 229 (839)
T KOG0269|consen 156 GTVKCWDLRSK--KSKSTFRS-NSESIRDVKFSPGYGNKFASIH--DSGYLQLWDLRQPDRCEKKLTAHN-GPVLCLNWH 229 (839)
T ss_pred ceEEEEeeecc--cccccccc-cchhhhceeeccCCCceEEEec--CCceEEEeeccCchhHHHHhhccc-CceEEEeec
Confidence 34667777664 23334432 1112235677775555444433 34456667776544 133444444 3333 399
Q ss_pred eeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEE--ecCCeeEEEEEEcC
Q 010654 85 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE--REGGLQKITTYRLP 155 (505)
Q Consensus 85 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~--~~~~~~~l~~~~~~ 155 (505)
|++.+|+=-+ +| ..+.+.+..+ ....-..+-..-..+..+.|-+.+-+-.+ ..-+-..+++|++.
T Consensus 230 Pnr~~lATGG-RD----K~vkiWd~t~-~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr 296 (839)
T KOG0269|consen 230 PNREWLATGG-RD----KMVKIWDMTD-SRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR 296 (839)
T ss_pred CCCceeeecC-CC----ccEEEEeccC-CCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence 9777665322 22 2566667654 22221333333345778888886433222 22233567888875
No 464
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=37.73 E-value=5.3e+02 Score=27.43 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=44.7
Q ss_pred EeCCCcEEEEEeccc--cceEEEEEeCCCCCceeeeeccccceeEE-eee-eCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 39 ASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASH-RGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 39 ~SpDg~~i~~~~~~~--~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
.|||-++|++..-.. ....+ +.++.... -..++...|..+. |-. ||+.|.+.+.+...-.-+||..-+.+-+.
T Consensus 145 ~spD~~~ia~~~~~~~~e~~~~-v~~~~~~~--~~~~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~~Gtdq~ 221 (712)
T KOG2237|consen 145 SSPDHKYIAYTKDTEGKELFTV-VIDVKFSG--PVWTHDGKGVSYLAWAKQDGEDLLYGTEDENNRPHKVYYHTLGTDQS 221 (712)
T ss_pred cCCCceEEEEEEcCCCCcccee-eeeeccCC--ceeeccCCceEeeeecccCCceeeeeeeccccCcceEEEEecccCCC
Confidence 678888887775443 23445 56665543 2223334455544 655 78877777665332335899888865334
Q ss_pred ceEEEc
Q 010654 115 TTVLIP 120 (505)
Q Consensus 115 ~~~~~~ 120 (505)
...++-
T Consensus 222 ~Dvl~~ 227 (712)
T KOG2237|consen 222 EDVLLY 227 (712)
T ss_pred cceEEE
Confidence 444333
No 465
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=37.31 E-value=3.1e+02 Score=26.67 Aligned_cols=108 Identities=10% Similarity=0.092 Sum_probs=53.4
Q ss_pred EEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceE
Q 010654 38 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 117 (505)
Q Consensus 38 ~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 117 (505)
..+|--..|+.+..+ ...|+++|+..+..++.+.-.-.....+|+| +.+.|+... +...||.+|......+-
T Consensus 194 kfNpvETsILas~~s--DrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP--eafnF~~a~---ED~nlY~~DmR~l~~p~- 265 (433)
T KOG0268|consen 194 KFNPVETSILASCAS--DRSIVLYDLRQASPLKKVILTMRTNTICWNP--EAFNFVAAN---EDHNLYTYDMRNLSRPL- 265 (433)
T ss_pred ecCCCcchheeeecc--CCceEEEecccCCccceeeeeccccceecCc--cccceeecc---ccccceehhhhhhcccc-
Confidence 345555554443322 3458888887765233332221123356999 566666543 22589999976533221
Q ss_pred EEcCCCCceeeEEEEeCCEE-EEEEecCCeeEEEEEEcC
Q 010654 118 LIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITTYRLP 155 (505)
Q Consensus 118 ~~~~~~~~~i~~~~~~~d~l-~~~~~~~~~~~l~~~~~~ 155 (505)
-+-.+--..+-+++.++-+- ++...-+. .+.+|.+.
T Consensus 266 ~v~~dhvsAV~dVdfsptG~EfvsgsyDk--sIRIf~~~ 302 (433)
T KOG0268|consen 266 NVHKDHVSAVMDVDFSPTGQEFVSGSYDK--SIRIFPVN 302 (433)
T ss_pred hhhcccceeEEEeccCCCcchhccccccc--eEEEeecC
Confidence 12222222345666665432 23333332 25566654
No 466
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=37.10 E-value=44 Score=26.49 Aligned_cols=30 Identities=27% Similarity=0.092 Sum_probs=14.9
Q ss_pred CCceeeEEEEEeCCccCCCCCCcEEEEEcCCCCcC
Q 010654 242 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC 276 (505)
Q Consensus 242 dG~~i~~~l~~p~~~~~~~~~~P~iv~~hGg~~~~ 276 (505)
+|..|+-.-..++ ..+...||++||.|++-
T Consensus 76 ~g~~iHFih~rs~-----~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 76 DGLDIHFIHVRSK-----RPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp TTEEEEEEEE--S------TT-EEEEEE--SS--G
T ss_pred eeEEEEEEEeeCC-----CCCCeEEEEECCCCccH
Confidence 6888875433332 23456788889999864
No 467
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=37.02 E-value=3.9e+02 Score=28.61 Aligned_cols=110 Identities=8% Similarity=-0.025 Sum_probs=53.9
Q ss_pred EEEEeCCCcEEEEEeccc-cceEEEEEeCCCCCceeeeecccccee-EEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCC
Q 010654 36 GLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTS 113 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 113 (505)
.+++|++|||++-..... ....+|-+-.-+ .+-.+..+.-+.. ..|||-++++.=+..... .-+-+.|+..
T Consensus 83 ~vAfS~~GryvatGEcG~~pa~kVw~la~h~--vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHD---MIVnv~dWr~-- 155 (1080)
T KOG1408|consen 83 CVAFSQNGRYVATGECGRTPASKVWSLAFHG--VVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHD---MIVNVNDWRV-- 155 (1080)
T ss_pred EEEEcCCCcEEEecccCCCccceeeeecccc--chhhhhhccccceeeeecCCCcEEEeeccccc---eEEEhhhhhh--
Confidence 578999999976443222 234555543322 2334444443333 249999987775543311 1111222210
Q ss_pred CceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEE
Q 010654 114 ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYR 153 (505)
Q Consensus 114 ~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~ 153 (505)
........-...+..++.+.|.-||+..-+..-.++.++
T Consensus 156 -N~~~asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~ 194 (1080)
T KOG1408|consen 156 -NSSGASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQ 194 (1080)
T ss_pred -cccccccccceeEEEEEEccCCceeeeeeeeeEEEEEee
Confidence 000111122335677788888777766554433344333
No 468
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=36.84 E-value=59 Score=20.77 Aligned_cols=32 Identities=6% Similarity=0.102 Sum_probs=17.3
Q ss_pred eCCCcEEEEEecc---ccceEEEEEeCCCCCceeee
Q 010654 40 SESKKFLFIASES---KITRFVFYLDVSKPEELRVL 72 (505)
Q Consensus 40 SpDg~~i~~~~~~---~~~~~l~~~d~~~~~~~~~l 72 (505)
.++++.++|-... ...+++|++|+++++ ++++
T Consensus 10 ~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~~-W~~~ 44 (49)
T PF13418_consen 10 IGDNSIYVFGGRDSSGSPLNDLWIFDIETNT-WTRL 44 (49)
T ss_dssp E-TTEEEEE--EEE-TEE---EEEEETTTTE-EEE-
T ss_pred EeCCeEEEECCCCCCCcccCCEEEEECCCCE-EEEC
Confidence 4566655555322 245799999999986 7776
No 469
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=36.72 E-value=1.3e+02 Score=21.98 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHHcCC-CCCCcEEEEeeChHHHHHHHHHh
Q 010654 322 TFTDFIACAEYLIKNCY-CTKEKLCIEGRSAGGLLIGAVLN 361 (505)
Q Consensus 322 ~~~D~~~~~~~l~~~~~-~d~~rv~i~G~S~GG~~~~~~~~ 361 (505)
....+..-++|+.+++- -.|++|-|.|.|-|=.++..++.
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~ 59 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAA 59 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHH
Confidence 44666777888888643 34689999999988556655544
No 470
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=35.87 E-value=4.6e+02 Score=26.21 Aligned_cols=67 Identities=7% Similarity=0.046 Sum_probs=35.0
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccce--eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
..++.|||- +|.. ....+.|-+.|++++.....+..+. +. ...|+.+|=+++...++ + .+.+.|+..
T Consensus 352 s~~fHpDgL--ifgt-gt~d~~vkiwdlks~~~~a~Fpght-~~vk~i~FsENGY~Lat~add-~----~V~lwDLRK 420 (506)
T KOG0289|consen 352 SAAFHPDGL--IFGT-GTPDGVVKIWDLKSQTNVAKFPGHT-GPVKAISFSENGYWLATAADD-G----SVKLWDLRK 420 (506)
T ss_pred EeeEcCCce--EEec-cCCCceEEEEEcCCccccccCCCCC-CceeEEEeccCceEEEEEecC-C----eEEEEEehh
Confidence 456777773 2222 2224567777887765233332222 32 23488777555544433 2 377778754
No 471
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=35.16 E-value=67 Score=29.28 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHhhC
Q 010654 327 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 327 ~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
.-+++.|.++++. ++.-.|.|-|+|+..++.++...
T Consensus 15 ~GVl~~L~e~gi~-~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 15 LGVLSLLIEAGVI-NETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHHcCCC-CCCCEEEEEcHHHHHHHHHHcCC
Confidence 4567888888754 34456899999999988888754
No 472
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=35.05 E-value=4.9e+02 Score=26.30 Aligned_cols=110 Identities=13% Similarity=0.195 Sum_probs=64.7
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCCCCCcee-eeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVSKPEELR-VLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~-~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
..++|++..++.+........+| |+++.. .. .++.+.+-... .|+|-..++.+...-|+ .+-++|....+
T Consensus 116 ~~f~~~d~t~l~s~sDd~v~k~~--d~s~a~-v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg----~vrl~DtR~~~- 187 (487)
T KOG0310|consen 116 TKFSPQDNTMLVSGSDDKVVKYW--DLSTAY-VQAELSGHTDYVRCGDISPANDHIVVTGSYDG----KVRLWDTRSLT- 187 (487)
T ss_pred EEecccCCeEEEecCCCceEEEE--EcCCcE-EEEEecCCcceeEeeccccCCCeEEEecCCCc----eEEEEEeccCC-
Confidence 35789888877665554334444 444443 31 23333333333 38998889988876543 55566765422
Q ss_pred ceEEEcCCCCceeeEEEEeCC-EEEEEEecCCeeEEEEEEcCCCC
Q 010654 115 TTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVG 158 (505)
Q Consensus 115 ~~~~~~~~~~~~i~~~~~~~d-~l~~~~~~~~~~~l~~~~~~~~~ 158 (505)
.|+.+-.-+..++.+..-+. .++..+ .| +.+.+||+.+++
T Consensus 188 -~~v~elnhg~pVe~vl~lpsgs~iasA--gG-n~vkVWDl~~G~ 228 (487)
T KOG0310|consen 188 -SRVVELNHGCPVESVLALPSGSLIASA--GG-NSVKVWDLTTGG 228 (487)
T ss_pred -ceeEEecCCCceeeEEEcCCCCEEEEc--CC-CeEEEEEecCCc
Confidence 45666555667888777666 444433 23 568899987533
No 473
>PLN02209 serine carboxypeptidase
Probab=33.62 E-value=1e+02 Score=31.24 Aligned_cols=30 Identities=17% Similarity=0.310 Sum_probs=26.5
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
..+ |||..|+.|.+|+...++++.+.|+-.
T Consensus 351 gir-VLiY~GD~D~icn~~Gte~wi~~L~w~ 380 (437)
T PLN02209 351 GYR-SLIFSGDHDITMPFQATQAWIKSLNYS 380 (437)
T ss_pred Cce-EEEEECCccccCCcHhHHHHHHhcCCc
Confidence 355 999999999999999999999999743
No 474
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=33.24 E-value=1.9e+02 Score=27.32 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=0.0
Q ss_pred EEEeCCCcEEEEEeccccceEEEEEeCC-------------------CCCceeeeeccccceeEEeeeeCCEEEEEEcCC
Q 010654 37 LQASESKKFLFIASESKITRFVFYLDVS-------------------KPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 97 (505)
Q Consensus 37 ~~~SpDg~~i~~~~~~~~~~~l~~~d~~-------------------~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~ 97 (505)
.++||||..++ .......|-++|++ .+- .+.|..+.+.+..-.-+-.++|.+.+.++
T Consensus 118 aafs~DG~lvA---TGsaD~SIKildvermlaks~~~em~~~~~qa~hPv-IRTlYDH~devn~l~FHPre~ILiS~srD 193 (430)
T KOG0640|consen 118 AAFSPDGSLVA---TGSADASIKILDVERMLAKSKPKEMISGDTQARHPV-IRTLYDHVDEVNDLDFHPRETILISGSRD 193 (430)
T ss_pred eeeCCCCcEEE---ccCCcceEEEeehhhhhhhcchhhhccCCcccCCce-EeehhhccCcccceeecchhheEEeccCC
Q ss_pred CCCCceEEEeeCCCCCCceE--EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 98 ELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 98 ~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
+ -+.++|...+...+- ++.+.....--++..+++.+++.... +.+.+|++++
T Consensus 194 ~----tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdH---p~~rlYdv~T 247 (430)
T KOG0640|consen 194 N----TVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDH---PTLRLYDVNT 247 (430)
T ss_pred C----eEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCC---CceeEEeccc
No 475
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=32.90 E-value=5.9e+02 Score=26.57 Aligned_cols=51 Identities=10% Similarity=0.052 Sum_probs=31.7
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 156 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~ 156 (505)
..|..+|+.+ ++..|........ ..+.....+.++|....+| .++.++..+
T Consensus 441 g~l~AiD~~t-Gk~~W~~~~~~p~-~~~~l~t~g~lvf~g~~~G--~l~a~D~~T 491 (527)
T TIGR03075 441 GSLIAWDPIT-GKIVWEHKEDFPL-WGGVLATAGDLVFYGTLEG--YFKAFDAKT 491 (527)
T ss_pred eeEEEEeCCC-CceeeEecCCCCC-CCcceEECCcEEEEECCCC--eEEEEECCC
Confidence 5688899887 7788855533221 2333334556777766555 577788764
No 476
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=32.83 E-value=1.2e+02 Score=18.36 Aligned_cols=25 Identities=12% Similarity=0.178 Sum_probs=16.9
Q ss_pred CCCcEEEEEeccccceEEEEEeCCCCC
Q 010654 41 ESKKFLFIASESKITRFVFYLDVSKPE 67 (505)
Q Consensus 41 pDg~~i~~~~~~~~~~~l~~~d~~~~~ 67 (505)
|||++|++... ....|.++|+.+++
T Consensus 1 pd~~~lyv~~~--~~~~v~~id~~~~~ 25 (42)
T TIGR02276 1 PDGTKLYVTNS--GSNTVSVIDTATNK 25 (42)
T ss_pred CCCCEEEEEeC--CCCEEEEEECCCCe
Confidence 68888765433 34567778887665
No 477
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=32.71 E-value=1.1e+02 Score=31.08 Aligned_cols=30 Identities=20% Similarity=0.301 Sum_probs=26.4
Q ss_pred CCCeEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 423 NYPHILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 423 ~~Pp~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
..+ |||..|+.|..||...++++.++|+-.
T Consensus 347 ~ir-VLiY~Gd~D~icn~~Gt~~wi~~L~w~ 376 (433)
T PLN03016 347 GYR-SLIYSGDHDIAVPFLATQAWIRSLNYS 376 (433)
T ss_pred Cce-EEEEECCccccCCcHhHHHHHHhCCCC
Confidence 355 999999999999999999999999743
No 478
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=32.55 E-value=5.7e+02 Score=26.29 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=31.7
Q ss_pred eEEEEEeCCCCC-ceeeeeccc--cce--eE--EeeeeC-CEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc
Q 010654 56 RFVFYLDVSKPE-ELRVLTPRV--VGV--DT--AASHRG-NHFFITRRSDELFNSELLACPVDNTSETTVLIP 120 (505)
Q Consensus 56 ~~l~~~d~~~~~-~~~~l~~~~--~~~--~~--~~s~dg-~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 120 (505)
..|+.+|+++|+ .++.-.... ... .. ...-.+ +.+|+.+.. ..|+.+|.++ |+..|...
T Consensus 71 g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~-----g~v~AlD~~T-G~~~W~~~ 137 (488)
T cd00216 71 SALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFD-----GRLVALDAET-GKQVWKFG 137 (488)
T ss_pred CcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCC-----CeEEEEECCC-CCEeeeec
Confidence 568888888886 222211110 000 00 012223 566665532 4899999887 78888544
No 479
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=32.47 E-value=91 Score=25.27 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCCcCCC----------CC-Cch-----------hHHHHHHCCcEEEEE
Q 010654 262 SDPLLLYGYGSYEICND----------PA-FNS-----------SRLSLLDRGFIFAIA 298 (505)
Q Consensus 262 ~~P~iv~~hGg~~~~~~----------~~-~~~-----------~~~~l~~~G~~v~~~ 298 (505)
++.+++++||.++..-. .. |.. ....|.+.||.|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 57899999997643211 11 111 124688889988876
No 480
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=32.24 E-value=75 Score=28.47 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=23.8
Q ss_pred CcEEEEeeChHHHHHHHHHhhCCCceeEEEecCC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 375 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~p~~~~a~v~~~~ 375 (505)
++|.+++||||=+.+..++...| ++.+++.+|
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAING 88 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGIP--FKRAIAING 88 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccCC--cceeEEEEC
Confidence 68999999999999888876544 455555544
No 481
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=32.12 E-value=4.5e+02 Score=24.97 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=56.3
Q ss_pred ceEEEEEeCCCCCceeeeeccc-cceeEEeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCC--CceeeEEE
Q 010654 55 TRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE--SVKLQDIQ 131 (505)
Q Consensus 55 ~~~l~~~d~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~i~~~~ 131 (505)
.+-|.++|++++..++++..-. +|..+.|.--|++.|+..-. .-+..+|+.++..++ +.+.-. ...-..+.
T Consensus 105 ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadld-----dgfLivdvsdpssP~-lagrya~~~~d~~~v~ 178 (370)
T COG5276 105 SSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLD-----DGFLIVDVSDPSSPQ-LAGRYALPGGDTHDVA 178 (370)
T ss_pred CCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeecc-----CcEEEEECCCCCCce-eeeeeccCCCCceeEE
Confidence 4568888888876444443222 25556688778877665432 257778888755554 322211 11124677
Q ss_pred EeCCEEEEEEecCCeeEEEEEEcC
Q 010654 132 LFIDHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 132 ~~~d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.++++-+.....+| |.+++++
T Consensus 179 ISGn~AYvA~~d~G---L~ivDVS 199 (370)
T COG5276 179 ISGNYAYVAWRDGG---LTIVDVS 199 (370)
T ss_pred EecCeEEEEEeCCC---eEEEEcc
Confidence 78898888877777 4567765
No 482
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=31.93 E-value=1.2e+02 Score=18.24 Aligned_cols=29 Identities=10% Similarity=0.053 Sum_probs=21.5
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKP 66 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~ 66 (505)
+++|+++++.|+++-... ..+++.++++.
T Consensus 13 ~la~d~~~~~lYw~D~~~--~~I~~~~~~g~ 41 (43)
T smart00135 13 GLAVDWIEGRLYWTDWGL--DVIEVANLDGT 41 (43)
T ss_pred EEEEeecCCEEEEEeCCC--CEEEEEeCCCC
Confidence 578999999988875543 66777777654
No 483
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=31.87 E-value=62 Score=30.31 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=43.1
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHhhC
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS-KSGRFERLREAAFTYTFLMRALS 495 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~~~~~~fl~~~l~ 495 (505)
.++-+-|++|++--..|++.. ..|.. +++-....+...++.||.+ ..+..-+.+-+-++.+|+.++=.
T Consensus 341 aL~tvEGEnDDIsgvGQTkAA-~~LC~-nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 341 ALFTVEGENDDISGVGQTKAA-HDLCS-NIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred eEEEeecccccccccchhHHH-HHHHh-cChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 489999999999988888654 33433 3443344444455899954 33333333345668889887643
No 484
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=31.70 E-value=53 Score=30.54 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=18.4
Q ss_pred CcEEEEeeChHHHHHHHHHhhC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
.+|-+.|||.||.++..+..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 5899999999998887776654
No 485
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=31.70 E-value=53 Score=30.54 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=18.4
Q ss_pred CcEEEEeeChHHHHHHHHHhhC
Q 010654 342 EKLCIEGRSAGGLLIGAVLNMR 363 (505)
Q Consensus 342 ~rv~i~G~S~GG~~~~~~~~~~ 363 (505)
.+|-+.|||.||.++..+..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 5899999999998887776654
No 486
>COG1647 Esterase/lipase [General function prediction only]
Probab=31.35 E-value=1.1e+02 Score=27.57 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=28.7
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhcCCCCCeEEEEecCCCCC
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 470 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 470 (505)
.+|++||--- .+.+.+.|.+.|+++|-.+-.=.|| |+||
T Consensus 17 AVLllHGFTG---t~~Dvr~Lgr~L~e~GyTv~aP~yp---GHG~ 55 (243)
T COG1647 17 AVLLLHGFTG---TPRDVRMLGRYLNENGYTVYAPRYP---GHGT 55 (243)
T ss_pred EEEEEeccCC---CcHHHHHHHHHHHHCCceEecCCCC---CCCC
Confidence 5999999764 3467899999999999765433455 4444
No 487
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=31.15 E-value=5e+02 Score=26.77 Aligned_cols=22 Identities=9% Similarity=0.151 Sum_probs=14.8
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVD 110 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 110 (505)
|.|+.+.+.|... .+++.-++.
T Consensus 153 W~p~S~~vl~c~g------~h~~IKpL~ 174 (737)
T KOG1524|consen 153 WAPNSNSIVFCQG------GHISIKPLA 174 (737)
T ss_pred ECCCCCceEEecC------CeEEEeecc
Confidence 8888888777652 266665654
No 488
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=30.98 E-value=5.3e+02 Score=25.48 Aligned_cols=50 Identities=12% Similarity=0.195 Sum_probs=28.8
Q ss_pred ceEEEeeCCCCCCceEEEcCCCCceeeEEEEeCCE-EEEEEecCCeeEEEEE
Q 010654 102 SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTY 152 (505)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~-l~~~~~~~~~~~l~~~ 152 (505)
..+|++|-+. -.+--++..--+..|.+++|+.|+ ..++...+|.-.+..+
T Consensus 321 ~svyvydtq~-~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtf 371 (434)
T KOG1009|consen 321 NSVYVYDTQT-LEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTF 371 (434)
T ss_pred ceEEEecccc-ccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEE
Confidence 3677777554 222224444445678899999984 4445555665544444
No 489
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=30.71 E-value=4.4e+02 Score=26.11 Aligned_cols=130 Identities=11% Similarity=0.100 Sum_probs=67.2
Q ss_pred eEEEEECCCCCCCCeEEEEecCCceEE-EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeecccccee-EEeeee
Q 010654 9 KAWLHKLEADQSNDICLYHEKDDIYSL-GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHR 86 (505)
Q Consensus 9 ~l~~~~lgt~~~~~~~~~~~~~~~~~~-~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~d 86 (505)
.|.+||-.-. +.++++.+ +.|.+ .++|.|.-..|+.. ++++ -|-+.|..++..+-.+-.....+. ..|+++
T Consensus 203 ~ikiWdf~~~--kee~vL~G--HgwdVksvdWHP~kgLiasg--skDn-lVKlWDprSg~cl~tlh~HKntVl~~~f~~n 275 (464)
T KOG0284|consen 203 TIKIWDFRMP--KEERVLRG--HGWDVKSVDWHPTKGLIASG--SKDN-LVKLWDPRSGSCLATLHGHKNTVLAVKFNPN 275 (464)
T ss_pred eEEEEeccCC--chhheecc--CCCCcceeccCCccceeEEc--cCCc-eeEeecCCCcchhhhhhhccceEEEEEEcCC
Confidence 4667776543 33445544 44666 68899998766532 2233 566678888752222222221222 349999
Q ss_pred CCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEc-CCCCceeeEEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 010654 87 GNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 87 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~--d~l~~~~~~~~~~~l~~~~~~ 155 (505)
|.+|+=.+.+ .-+-++|+..-.+-. .+- +..+ +..+.|.+ ..|+...--+|. ++.+.+.
T Consensus 276 ~N~Llt~skD-----~~~kv~DiR~mkEl~-~~r~Hkkd--v~~~~WhP~~~~lftsgg~Dgs--vvh~~v~ 337 (464)
T KOG0284|consen 276 GNWLLTGSKD-----QSCKVFDIRTMKELF-TYRGHKKD--VTSLTWHPLNESLFTSGGSDGS--VVHWVVG 337 (464)
T ss_pred CCeeEEccCC-----ceEEEEehhHhHHHH-Hhhcchhh--heeeccccccccceeeccCCCc--eEEEecc
Confidence 9766655433 245566765311111 111 2222 34555655 466666555554 4445444
No 490
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=29.73 E-value=4.3e+02 Score=25.93 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=0.0
Q ss_pred CceEEEEECCCCCC----CCeEEEEecCC------ceEEEEEEeCCCcEEEEEeccccc-----------------eEEE
Q 010654 7 PDKAWLHKLEADQS----NDICLYHEKDD------IYSLGLQASESKKFLFIASESKIT-----------------RFVF 59 (505)
Q Consensus 7 ~~~l~~~~lgt~~~----~~~~~~~~~~~------~~~~~~~~SpDg~~i~~~~~~~~~-----------------~~l~ 59 (505)
..+|+++.-..+.. +.+.+++.-.. ...-.+.|.||| +|+++...... ..+|
T Consensus 89 ~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG-~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~ 167 (367)
T TIGR02604 89 PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDG-WLYFNHGNTLASKVTRPGTSDESRQGLGGGLF 167 (367)
T ss_pred CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCC-CEEEecccCCCceeccCCCccCcccccCceEE
Q ss_pred EEeCCCCCceeeeeccccceeEE-eeeeCCEEEEEEcCCCCCCceEEEe
Q 010654 60 YLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLAC 107 (505)
Q Consensus 60 ~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~l~~~ 107 (505)
++|.++++ .+.+.....+..-. |+++|+. |.++.+.....++..+
T Consensus 168 r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~l--~~tdn~~~~~~~i~~~ 213 (367)
T TIGR02604 168 RYNPDGGK-LRVVAHGFQNPYGHSVDSWGDV--FFCDNDDPPLCRVTPV 213 (367)
T ss_pred EEecCCCe-EEEEecCcCCCccceECCCCCE--EEEccCCCceeEEccc
No 491
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=29.29 E-value=4.5e+02 Score=24.05 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=75.2
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCCceeeeeccccceeE-EeeeeCCEEEEEEcCCCCCCceEEEeeCCCCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 114 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 114 (505)
+++.|-|...++- ......+++.|+++|+..+.+-.+...+.. .|. +...+++...-+ ..+-+.|-.....
T Consensus 64 D~~~s~Dnskf~s---~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fN-eesSVv~SgsfD----~s~r~wDCRS~s~ 135 (307)
T KOG0316|consen 64 DAALSSDNSKFAS---CGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFN-EESSVVASGSFD----SSVRLWDCRSRSF 135 (307)
T ss_pred ecccccccccccc---CCCCceEEEEEcccCeeeeecccccceeeEEEec-CcceEEEecccc----ceeEEEEcccCCC
Confidence 5566666666432 223567999999999844444433222211 133 334555554432 2333344433122
Q ss_pred ceE-EEcCCCCceeeEEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceee-ccCCeeeecCCCCcccCCEEE
Q 010654 115 TTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVE-FIDPVYSIDPSESVFSSRILR 192 (505)
Q Consensus 115 ~~~-~~~~~~~~~i~~~~~~~d~l~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 192 (505)
+.. ++.+..|. +.++...+ +.++.-..+|. +..|++.. |. . ..+ +-. .+...++++|++..+
T Consensus 136 ePiQildea~D~-V~Si~v~~-heIvaGS~DGt--vRtydiR~-G~-l-------~sDy~g~---pit~vs~s~d~nc~L 199 (307)
T KOG0316|consen 136 EPIQILDEAKDG-VSSIDVAE-HEIVAGSVDGT--VRTYDIRK-GT-L-------SSDYFGH---PITSVSFSKDGNCSL 199 (307)
T ss_pred CccchhhhhcCc-eeEEEecc-cEEEeeccCCc--EEEEEeec-ce-e-------ehhhcCC---cceeEEecCCCCEEE
Confidence 222 55555553 66776654 45555566664 45677653 21 0 001 001 123345678888665
Q ss_pred EEEecCCCCceEEEEECCCCc
Q 010654 193 FHYSSLRTPPSVYDYDMDMGI 213 (505)
Q Consensus 193 ~~~~~~~~p~~~~~~~~~~~~ 213 (505)
...-. ..+-++|-.+|+
T Consensus 200 a~~l~----stlrLlDk~tGk 216 (307)
T KOG0316|consen 200 ASSLD----STLRLLDKETGK 216 (307)
T ss_pred Eeecc----ceeeecccchhH
Confidence 54332 345667777776
No 492
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.93 E-value=3.2e+02 Score=30.67 Aligned_cols=114 Identities=9% Similarity=0.068 Sum_probs=63.8
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEE-cCCCCceeeEEEEeCC--EEEEEEecCCeeEEEEEEcCCCCC
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI-PHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGE 159 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~d--~l~~~~~~~~~~~l~~~~~~~~~~ 159 (505)
|.+...-+.-. |+..+.|+..|+..+..+- .. +...-..|..++|... +++.....+| +..+||+..+ +
T Consensus 124 fN~~q~nlLAS----Ga~~geI~iWDlnn~~tP~-~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg--~~~iWDlr~~-~ 195 (1049)
T KOG0307|consen 124 FNPFQGNLLAS----GADDGEILIWDLNKPETPF-TPGSQAPPSEIKCLSWNRKVSHILASGSPSG--RAVIWDLRKK-K 195 (1049)
T ss_pred ccccCCceeec----cCCCCcEEEeccCCcCCCC-CCCCCCCcccceEeccchhhhHHhhccCCCC--CceeccccCC-C
Confidence 66666533322 3345799999998633222 12 1212234677888876 4444444443 4567888642 2
Q ss_pred cccccCCCceeeccCCeeeecCCCCcccCCEEEEEEecCCCCceEEEEECC
Q 010654 160 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 210 (505)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 210 (505)
.+..++.. .....++.+.|.|+..+-+++++....-+.|-+.|++
T Consensus 196 pii~ls~~------~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR 240 (1049)
T KOG0307|consen 196 PIIKLSDT------PGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR 240 (1049)
T ss_pred cccccccC------CCccceeeeeeCCCCceeeeeecCCCCCceeEeeccc
Confidence 22222211 1111244567888887777888887777777776654
No 493
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=28.30 E-value=22 Score=35.63 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=22.9
Q ss_pred eEEEEccCCCCCCCCChHHHHHHHHHhc
Q 010654 426 HILVTAGLNDPRVMYSEPAKFVAKLREM 453 (505)
Q Consensus 426 p~Li~~G~~D~~vp~~~~~~~~~~L~~~ 453 (505)
+|||.+|..|..||...++.+.+.|.-.
T Consensus 332 rVLiy~Gd~D~i~n~~Gt~~~i~~L~w~ 359 (415)
T PF00450_consen 332 RVLIYNGDLDLICNFLGTERWIDNLNWS 359 (415)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHCTECT
T ss_pred eeEEeccCCCEEEEeccchhhhhccccC
Confidence 4999999999999999999998887643
No 494
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=28.03 E-value=5e+02 Score=24.24 Aligned_cols=112 Identities=11% Similarity=0.045 Sum_probs=55.8
Q ss_pred EEEEeCCCcEEEEEeccccceEEEEEeCCCCC-cee--eeeccccce-eEEeeeeCCEEEEEEcCCCCCCceEEEeeCCC
Q 010654 36 GLQASESKKFLFIASESKITRFVFYLDVSKPE-ELR--VLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 111 (505)
Q Consensus 36 ~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~-~~~--~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 111 (505)
+...|+|+++++... +..+++++.++... -.. .+.+..++. ..+||.....++..+.+ + .+..+|+..
T Consensus 163 s~~~snd~~~~~~Vg---ds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qd-g----~~~I~DVR~ 234 (344)
T KOG4532|consen 163 SLHYSNDPSWGSSVG---DSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQD-G----TCAIYDVRN 234 (344)
T ss_pred eeEEcCCCceEEEec---CCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecC-C----cEEEEEecc
Confidence 567899999876543 23345554444332 011 222333332 23488888888888764 2 566667644
Q ss_pred CCCceEEE---cCCCCceeeEEEEeC-CEEEEEEecCCeeEEEEEEcC
Q 010654 112 TSETTVLI---PHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 155 (505)
Q Consensus 112 ~~~~~~~~---~~~~~~~i~~~~~~~-d~l~~~~~~~~~~~l~~~~~~ 155 (505)
.+.+.... .++....+.....+. +-+=+.+..++.+.+.++++.
T Consensus 235 ~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 235 MATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred cccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 22221111 122233455555552 222233333445567777765
No 495
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=27.13 E-value=2e+02 Score=26.76 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=22.6
Q ss_pred eEEEEccCCCCCCC-CChHHHHHHHHHhcCCCC
Q 010654 426 HILVTAGLNDPRVM-YSEPAKFVAKLREMKTDD 457 (505)
Q Consensus 426 p~Li~~G~~D~~vp-~~~~~~~~~~L~~~~~~~ 457 (505)
+++++||..+..+. ......+++.|.++|..+
T Consensus 28 ~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v 60 (274)
T TIGR03100 28 GVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPV 60 (274)
T ss_pred eEEEEeCCccccCCchhHHHHHHHHHHHCCCEE
Confidence 58889988877653 333456788888888653
No 496
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=26.17 E-value=1.7e+02 Score=29.31 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=23.3
Q ss_pred CceEEEEEEeCCCcEEEEEeccccceEEEEEeCCCCC
Q 010654 31 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 67 (505)
Q Consensus 31 ~~~~~~~~~SpDg~~i~~~~~~~~~~~l~~~d~~~~~ 67 (505)
+.|.+.+..||||++|+.- .....+|..|-.+-+
T Consensus 432 aGys~~v~fSpDG~~l~SG---dsdG~v~~wdwkt~k 465 (503)
T KOG0282|consen 432 AGYSCQVDFSPDGRTLCSG---DSDGKVNFWDWKTTK 465 (503)
T ss_pred cCceeeEEEcCCCCeEEee---cCCccEEEeechhhh
Confidence 4577778899999987532 224567888776654
No 497
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=25.51 E-value=2.9e+02 Score=27.52 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=42.2
Q ss_pred CcEEEEEc--CCCCcCCCCCCchhHHHHHHCCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc-CCC
Q 010654 263 DPLLLYGY--GSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYC 339 (505)
Q Consensus 263 ~P~iv~~h--Gg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 339 (505)
.|+|+..- ..+.. .+........|.+.|+.|+-|..- .|. ....+..+..+.+++...+...... ...
T Consensus 113 ~plviaPamn~~m~~--~p~~~~Nl~~L~~~G~~vv~P~~g---~~a----c~~~g~g~~~~~~~i~~~v~~~~~~~~~~ 183 (390)
T TIGR00521 113 APIILAPAMNENMYN--NPAVQENIKRLKDDGYIFIEPDSG---LLA----CGDEGKGRLAEPETIVKAAEREFSPKEDL 183 (390)
T ss_pred CCEEEEeCCChhhcC--CHHHHHHHHHHHHCCcEEECCCCc---ccc----cccccCCCCCCHHHHHHHHHHHHhhcccc
Confidence 57777763 22211 122233456788889888766531 110 0011233346678887777655543 223
Q ss_pred CCCcEEEEee
Q 010654 340 TKEKLCIEGR 349 (505)
Q Consensus 340 d~~rv~i~G~ 349 (505)
...++.|.|+
T Consensus 184 ~~~~vlit~g 193 (390)
T TIGR00521 184 EGKRVLITAG 193 (390)
T ss_pred CCceEEEecC
Confidence 4567888888
No 498
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=25.46 E-value=1.2e+02 Score=27.36 Aligned_cols=44 Identities=11% Similarity=0.122 Sum_probs=28.6
Q ss_pred CCcEEEEEcccCCCCCchhHHHcccccCCcchHHHHHHHHHHHHHc----CCCCCCcEEEEeeChH
Q 010654 291 RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN----CYCTKEKLCIEGRSAG 352 (505)
Q Consensus 291 ~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~rv~i~G~S~G 352 (505)
.|++++.|.|-++-. .-+..+++|+... .....+.++|+|.|.|
T Consensus 92 Dgvii~TPEYn~sip------------------g~LKNaiDwls~~~~~~~~~~~KpvaivgaSgg 139 (219)
T TIGR02690 92 EGQVWCSPERHGAIT------------------GSQKDQIDWIPLSVGPVRPTQGKTLAVMQVSGG 139 (219)
T ss_pred CEEEEeCCccccCcC------------------HHHHHHHHhcccCcccccccCCCcEEEEEeCCc
Confidence 588999998865421 3345677887653 1123467999999833
No 499
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only]
Probab=25.41 E-value=7.6e+02 Score=25.41 Aligned_cols=127 Identities=8% Similarity=0.025 Sum_probs=0.0
Q ss_pred EEEEECCCCCCCCeEEEEecCCceEEEEEEeCCCcEEEEEeccccc---eEEEEEeCCCCCceeeee-----ccccceeE
Q 010654 10 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKIT---RFVFYLDVSKPEELRVLT-----PRVVGVDT 81 (505)
Q Consensus 10 l~~~~lgt~~~~~~~~~~~~~~~~~~~~~~SpDg~~i~~~~~~~~~---~~l~~~d~~~~~~~~~l~-----~~~~~~~~ 81 (505)
|+.+|+.|..=.-...+...++....-..+.-+.+.++|-...... +++|++|+++.+ +..+. +.......
T Consensus 141 l~~~d~~t~~W~~l~~~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~ndl~i~d~~~~~-W~~~~~~g~~P~pR~gH~ 219 (482)
T KOG0379|consen 141 LHSLDLSTRTWSLLSPTGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLNDLHIYDLETST-WSELDTQGEAPSPRYGHA 219 (482)
T ss_pred eEeccCCCCcEEEecCcCCCCCCcccceEEEECCEEEEECCccCcccceeeeeeecccccc-ceecccCCCCCCCCCCce
Q ss_pred EeeeeCCEEEEEEcC-CCCCCceEEEeeCCCCCCceE-EEcCCCC----ceeeEEEEeCCEEEEE
Q 010654 82 AASHRGNHFFITRRS-DELFNSELLACPVDNTSETTV-LIPHRES----VKLQDIQLFIDHLAVY 140 (505)
Q Consensus 82 ~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~-~~~~~~~----~~i~~~~~~~d~l~~~ 140 (505)
.....++.+.|.... ++.....++.+|+.+ ..| .+....+ +.--...+.++.+++.
T Consensus 220 ~~~~~~~~~v~gG~~~~~~~l~D~~~ldl~~---~~W~~~~~~g~~p~~R~~h~~~~~~~~~~l~ 281 (482)
T KOG0379|consen 220 MVVVGNKLLVFGGGDDGDVYLNDVHILDLST---WEWKLLPTGGDLPSPRSGHSLTVSGDHLLLF 281 (482)
T ss_pred EEEECCeEEEEeccccCCceecceEeeeccc---ceeeeccccCCCCCCcceeeeEEECCEEEEE
No 500
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=25.32 E-value=6.8e+02 Score=26.88 Aligned_cols=62 Identities=13% Similarity=0.107 Sum_probs=38.4
Q ss_pred eeeeCCEEEEEEcCCCCCCceEEEeeCCCCCCceEEEcCCCCceeeEEE-EeCCEEEEEEecCCeeEEEEE
Q 010654 83 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ-LFIDHLAVYEREGGLQKITTY 152 (505)
Q Consensus 83 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~d~l~~~~~~~~~~~l~~~ 152 (505)
+-|+.+++++.+|. +.-++| ++.+ -.-+ ++....+..+ +++ |+.+.++.+..++....++.+
T Consensus 332 lG~e~~~laVATNs---~~lr~y--~~~~-~~c~-ii~GH~e~vl-SL~~~~~g~llat~sKD~svilWr~ 394 (775)
T KOG0319|consen 332 LGPEESHLAVATNS---PELRLY--TLPT-SYCQ-IIPGHTEAVL-SLDVWSSGDLLATGSKDKSVILWRL 394 (775)
T ss_pred cCCccceEEEEeCC---CceEEE--ecCC-CceE-EEeCchhhee-eeeecccCcEEEEecCCceEEEEEe
Confidence 78888999999886 223555 6655 3344 6666666533 444 554546666777765555544
Done!