Query 010658
Match_columns 505
No_of_seqs 446 out of 1872
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 11:31:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010658.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010658hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mjh_A Protein (ATP-binding do 99.8 1.6E-20 5.3E-25 170.8 16.3 154 1-165 1-161 (162)
2 3s3t_A Nucleotide-binding prot 99.8 8.6E-20 2.9E-24 162.6 16.9 139 4-162 4-146 (146)
3 3hgm_A Universal stress protei 99.8 3.6E-20 1.2E-24 165.0 11.5 141 5-161 2-147 (147)
4 2dum_A Hypothetical protein PH 99.8 1.8E-19 6E-24 165.3 16.0 147 1-164 1-157 (170)
5 3idf_A USP-like protein; unive 99.8 5.2E-19 1.8E-23 156.2 15.0 133 6-162 2-138 (138)
6 2gm3_A Unknown protein; AT3G01 99.8 3.4E-19 1.2E-23 164.3 13.6 147 4-164 4-164 (175)
7 3fg9_A Protein of universal st 99.8 6.7E-19 2.3E-23 159.1 15.2 137 4-162 14-156 (156)
8 2z08_A Universal stress protei 99.8 4.8E-19 1.6E-23 156.6 13.6 135 5-162 2-137 (137)
9 3tnj_A Universal stress protei 99.8 1E-18 3.4E-23 156.5 14.9 143 4-164 5-148 (150)
10 1tq8_A Hypothetical protein RV 99.8 5E-19 1.7E-23 162.3 11.4 139 4-164 16-159 (163)
11 3dlo_A Universal stress protei 99.8 1.9E-18 6.5E-23 157.1 13.7 130 4-162 23-155 (155)
12 3fdx_A Putative filament prote 99.7 5.8E-18 2E-22 150.2 12.3 136 6-162 2-143 (143)
13 1jmv_A USPA, universal stress 99.7 1.8E-17 6.3E-22 146.7 11.3 137 5-164 2-139 (141)
14 1q77_A Hypothetical protein AQ 99.7 1.3E-16 4.4E-21 140.9 9.6 129 4-162 3-138 (138)
15 3ab8_A Putative uncharacterize 99.7 2.4E-16 8.2E-21 154.7 12.0 144 6-164 1-150 (268)
16 3olq_A Universal stress protei 99.7 5.1E-16 1.8E-20 156.0 14.0 144 4-165 6-152 (319)
17 3cis_A Uncharacterized protein 99.6 2E-15 6.8E-20 151.6 15.1 140 3-165 17-163 (309)
18 3loq_A Universal stress protei 99.6 3E-16 1E-20 156.3 8.1 142 1-164 18-163 (294)
19 3mt0_A Uncharacterized protein 99.6 2.7E-15 9.4E-20 149.3 15.0 137 4-163 133-276 (290)
20 3olq_A Universal stress protei 99.6 5.1E-15 1.7E-19 148.7 13.5 143 5-165 156-307 (319)
21 3cis_A Uncharacterized protein 99.6 6.7E-15 2.3E-19 147.7 13.3 136 5-163 171-306 (309)
22 3mt0_A Uncharacterized protein 99.6 8.4E-15 2.9E-19 145.7 11.1 123 3-164 5-129 (290)
23 3loq_A Universal stress protei 99.5 2.1E-14 7.3E-19 142.9 10.7 121 4-164 169-291 (294)
24 3ab8_A Putative uncharacterize 99.4 9.3E-13 3.2E-17 129.0 11.2 113 5-162 154-268 (268)
25 2nru_A Interleukin-1 receptor- 97.1 0.00037 1.3E-08 68.4 4.8 49 446-495 10-64 (307)
26 4gt4_A Tyrosine-protein kinase 96.5 0.00069 2.4E-08 67.9 1.5 43 459-504 26-78 (308)
27 3uim_A Brassinosteroid insensi 96.0 0.0032 1.1E-07 62.1 3.2 49 446-495 15-64 (326)
28 4aoj_A High affinity nerve gro 95.6 0.0058 2E-07 61.7 3.5 43 461-504 41-92 (329)
29 2c30_A Serine/threonine-protei 95.6 0.0095 3.3E-07 59.1 4.7 46 449-495 23-80 (321)
30 3vkg_A Dynein heavy chain, cyt 95.4 0.78 2.7E-05 58.8 21.6 28 284-311 1934-1961(3245)
31 2qkw_B Protein kinase; three-h 95.3 0.0036 1.2E-07 61.8 0.5 46 449-495 27-73 (321)
32 3omv_A RAF proto-oncogene seri 94.4 0.019 6.4E-07 57.5 3.1 30 464-495 39-68 (307)
33 3p1a_A MYT1 kinase, membrane-a 94.1 0.0097 3.3E-07 58.6 0.2 34 461-495 57-92 (311)
34 3a2k_A TRNA(Ile)-lysidine synt 93.6 0.28 9.7E-06 51.7 10.5 100 1-130 14-129 (464)
35 1k9a_A Carboxyl-terminal SRC k 93.5 0.046 1.6E-06 57.0 4.1 42 461-503 193-234 (450)
36 1byg_A CSK, protein (C-termina 93.5 0.064 2.2E-06 51.3 4.8 43 460-503 20-62 (278)
37 4fih_A Serine/threonine-protei 93.2 0.05 1.7E-06 55.3 3.8 31 463-494 76-108 (346)
38 4aw2_A Serine/threonine-protei 92.7 0.045 1.5E-06 57.3 2.6 43 451-494 64-108 (437)
39 1wy5_A TILS, hypothetical UPF0 92.7 0.56 1.9E-05 46.7 10.6 41 2-43 21-62 (317)
40 2x7f_A TRAF2 and NCK-interacti 92.7 0.022 7.5E-07 55.9 0.2 48 447-495 10-59 (326)
41 3vkg_A Dynein heavy chain, cyt 92.6 4.1 0.00014 52.4 20.2 66 361-426 2014-2079(3245)
42 4g3f_A NF-kappa-beta-inducing 92.6 0.056 1.9E-06 54.8 3.1 35 460-495 57-93 (336)
43 4fie_A Serine/threonine-protei 92.5 0.081 2.8E-06 55.3 4.2 32 462-494 152-185 (423)
44 3soc_A Activin receptor type-2 92.4 0.075 2.6E-06 52.4 3.7 34 460-494 23-56 (322)
45 2w4o_A Calcium/calmodulin-depe 92.2 0.089 3E-06 52.7 4.0 36 459-495 51-88 (349)
46 4ase_A Vascular endothelial gr 92.2 0.098 3.4E-06 53.2 4.3 35 461-496 64-105 (353)
47 4f9c_A Cell division cycle 7-r 92.0 0.068 2.3E-06 54.5 2.8 38 459-497 19-61 (361)
48 1qcf_A Haematopoetic cell kina 91.9 0.12 4E-06 53.9 4.5 44 459-503 186-231 (454)
49 2vd5_A DMPK protein; serine/th 91.8 0.072 2.5E-06 55.2 2.7 43 451-494 51-95 (412)
50 2vuw_A Serine/threonine-protei 91.7 0.069 2.4E-06 52.9 2.5 34 460-494 19-52 (336)
51 3pg1_A Mitogen-activated prote 91.5 0.11 3.6E-06 52.0 3.6 43 451-494 12-55 (362)
52 3dzo_A Rhoptry kinase domain; 91.5 0.085 2.9E-06 54.3 3.0 36 458-494 75-112 (413)
53 4b9d_A Serine/threonine-protei 91.5 0.092 3.1E-06 53.5 3.1 34 461-495 24-59 (350)
54 3fpq_A Serine/threonine-protei 91.4 0.11 3.6E-06 51.5 3.4 28 467-495 32-61 (290)
55 4b99_A Mitogen-activated prote 91.4 0.11 3.8E-06 53.7 3.7 34 461-495 54-89 (398)
56 3llt_A Serine/threonine kinase 91.3 0.058 2E-06 53.8 1.4 48 447-495 21-70 (360)
57 3gen_A Tyrosine-protein kinase 91.1 0.16 5.3E-06 48.6 4.3 42 460-502 23-66 (283)
58 3p86_A Serine/threonine-protei 91.1 0.14 4.6E-06 50.4 3.8 35 460-495 36-70 (309)
59 1i84_S Smooth muscle myosin he 91.0 0.45 1.5E-05 56.0 8.8 10 22-31 437-446 (1184)
60 3na7_A HP0958; flagellar bioge 90.7 12 0.00042 35.8 17.9 60 361-420 104-167 (256)
61 3tnu_B Keratin, type II cytosk 90.7 3.6 0.00012 35.4 12.1 73 347-419 29-112 (129)
62 4aw0_A HPDK1, 3-phosphoinositi 90.6 0.13 4.5E-06 51.4 3.2 33 461-494 32-66 (311)
63 1fmk_A C-SRC, P60-SRC, tyrosin 90.5 0.18 6E-06 52.6 4.3 43 460-503 183-227 (452)
64 3e3p_A Protein kinase, putativ 90.4 0.17 5.6E-06 50.3 3.8 41 454-495 16-58 (360)
65 3mdy_A Bone morphogenetic prot 90.4 0.13 4.5E-06 50.4 3.0 36 458-494 34-69 (337)
66 3com_A Serine/threonine-protei 90.2 0.17 5.9E-06 49.1 3.7 36 460-496 28-65 (314)
67 3v8s_A RHO-associated protein 89.8 0.16 5.6E-06 52.5 3.2 39 455-494 63-103 (410)
68 3uqc_A Probable conserved tran 89.4 0.26 8.8E-06 47.9 4.2 34 461-495 31-66 (286)
69 2y7j_A Phosphorylase B kinase 89.4 0.28 9.7E-06 49.3 4.6 38 457-495 90-129 (365)
70 3kul_A Ephrin type-A receptor 89.4 0.22 7.7E-06 49.1 3.8 32 463-495 51-87 (325)
71 2h8h_A Proto-oncogene tyrosine 89.3 0.24 8.2E-06 52.9 4.2 43 460-503 266-310 (535)
72 1opk_A P150, C-ABL, proto-onco 89.2 0.21 7.2E-06 52.7 3.6 43 460-503 219-264 (495)
73 1b6c_B TGF-B superfamily recep 89.1 0.35 1.2E-05 47.5 4.9 37 458-495 39-75 (342)
74 3an0_A Dual specificity mitoge 89.0 0.23 7.9E-06 48.9 3.5 36 459-495 49-86 (340)
75 2clq_A Mitogen-activated prote 88.9 0.26 8.8E-06 47.2 3.7 32 463-495 24-57 (295)
76 3u1c_A Tropomyosin alpha-1 cha 88.9 7.1 0.00024 32.1 12.0 67 327-393 24-90 (101)
77 2vx3_A Dual specificity tyrosi 88.9 0.21 7.2E-06 50.4 3.2 37 458-495 51-89 (382)
78 1vzo_A Ribosomal protein S6 ki 88.8 0.28 9.6E-06 49.1 4.0 34 460-494 53-91 (355)
79 3vhe_A Vascular endothelial gr 88.7 0.26 8.9E-06 48.8 3.7 44 451-495 12-62 (359)
80 4f0f_A Serine/threonine-protei 88.7 0.29 9.9E-06 46.8 3.9 34 460-494 18-53 (287)
81 2dfs_A Myosin-5A; myosin-V, in 88.6 15 0.00053 42.6 18.8 9 22-30 411-419 (1080)
82 3u59_A Tropomyosin beta chain; 88.5 7.2 0.00025 32.0 11.9 66 327-392 24-89 (101)
83 3v5w_A G-protein coupled recep 88.4 0.26 8.8E-06 54.6 3.7 34 460-494 188-223 (689)
84 3bas_A Myosin heavy chain, str 88.4 6.4 0.00022 31.6 11.2 56 333-388 28-83 (89)
85 3e7e_A HBUB1, BUB1A, mitotic c 88.2 0.21 7.3E-06 49.9 2.7 36 459-495 63-105 (365)
86 1j1b_A Glycogen synthase kinas 88.1 0.28 9.5E-06 50.5 3.6 33 462-495 55-89 (420)
87 3niz_A Rhodanese family protei 88.1 0.29 1E-05 47.9 3.6 35 460-495 20-55 (311)
88 3oja_B Anopheles plasmodium-re 88.0 5.9 0.0002 42.3 14.2 27 389-415 544-570 (597)
89 1u5q_A Serine/threonine protei 87.9 0.29 1E-05 49.0 3.5 35 460-495 53-89 (348)
90 1xjd_A Protein kinase C, theta 87.9 0.29 1E-05 49.1 3.5 36 458-494 14-51 (345)
91 3byv_A Rhoptry kinase; malaria 87.8 0.22 7.5E-06 50.2 2.6 34 460-494 72-107 (377)
92 3coi_A Mitogen-activated prote 87.8 0.4 1.4E-05 47.6 4.4 34 461-495 24-59 (353)
93 3aln_A Dual specificity mitoge 87.8 0.31 1.1E-05 47.7 3.5 34 461-495 22-57 (327)
94 3cbl_A C-FES, proto-oncogene t 87.7 0.3 1E-05 49.3 3.5 34 461-495 114-149 (377)
95 2x4f_A Myosin light chain kina 87.6 0.25 8.5E-06 50.1 2.8 31 464-495 92-124 (373)
96 3qwe_A GMIP, GEM-interacting p 87.6 19 0.00065 35.1 16.1 121 292-415 102-228 (279)
97 2wqm_A Serine/threonine-protei 87.5 0.4 1.4E-05 46.5 4.1 35 460-495 31-67 (310)
98 3nsz_A CK II alpha, casein kin 87.5 0.37 1.3E-05 47.1 3.9 34 461-495 36-71 (330)
99 3a99_A Proto-oncogene serine/t 87.5 0.38 1.3E-05 47.2 4.0 35 459-494 41-77 (320)
100 3rgf_A Cyclin-dependent kinase 87.4 0.32 1.1E-05 49.5 3.5 30 466-496 26-59 (405)
101 4exu_A Mitogen-activated prote 87.3 0.44 1.5E-05 47.9 4.4 35 460-495 41-77 (371)
102 1zar_A RIO2 kinase; serine kin 87.3 0.42 1.4E-05 46.6 4.1 35 459-494 88-123 (282)
103 3dls_A PAS domain-containing s 87.2 0.37 1.2E-05 47.9 3.7 35 460-495 23-59 (335)
104 1mqb_A Ephrin type-A receptor 87.2 0.29 9.8E-06 48.4 2.9 45 450-495 24-83 (333)
105 3q60_A ROP5B; pseudokinase, tr 87.2 0.33 1.1E-05 48.7 3.4 35 460-495 61-97 (371)
106 3ubd_A Ribosomal protein S6 ki 87.1 0.33 1.1E-05 48.2 3.3 33 461-494 24-61 (304)
107 1ic2_A Tropomyosin alpha chain 87.1 8.4 0.00029 30.3 11.0 32 353-384 5-36 (81)
108 3is5_A Calcium-dependent prote 87.0 0.4 1.4E-05 46.0 3.8 34 461-495 22-57 (285)
109 3hko_A Calcium/calmodulin-depe 87.0 0.4 1.4E-05 47.1 3.9 39 455-494 20-60 (345)
110 3fxz_A Serine/threonine-protei 86.9 0.34 1.2E-05 47.0 3.3 33 461-494 20-54 (297)
111 3mi9_A Cell division protein k 86.9 0.44 1.5E-05 47.2 4.1 34 460-494 16-51 (351)
112 3cek_A Dual specificity protei 86.8 0.12 4.2E-06 50.4 -0.1 44 451-495 18-62 (313)
113 3gbz_A Kinase, CMGC CDK; ssgci 86.7 0.42 1.4E-05 47.0 3.8 37 457-494 30-68 (329)
114 1cm8_A Phosphorylated MAP kina 86.7 0.46 1.6E-05 47.8 4.2 35 460-495 24-60 (367)
115 3a7i_A MST3 kinase, serine/thr 86.6 0.5 1.7E-05 45.6 4.2 34 461-495 22-57 (303)
116 2qol_A Ephrin receptor; recept 86.6 0.25 8.4E-06 50.1 2.0 34 461-495 45-83 (373)
117 2iwi_A Serine/threonine-protei 86.5 0.33 1.1E-05 47.1 2.9 37 458-495 28-66 (312)
118 1wak_A Serine/threonine-protei 86.4 0.42 1.4E-05 47.8 3.7 34 461-495 37-72 (397)
119 2zmd_A Dual specificity protei 86.4 0.37 1.3E-05 49.0 3.3 34 461-495 56-90 (390)
120 3uc3_A Serine/threonine-protei 86.2 0.43 1.5E-05 47.9 3.7 35 460-495 19-55 (361)
121 2dyl_A Dual specificity mitoge 86.2 0.42 1.4E-05 46.2 3.5 35 460-495 24-60 (318)
122 2xir_A Vascular endothelial gr 86.1 0.38 1.3E-05 46.5 3.1 44 452-496 18-68 (316)
123 2pml_X PFPK7, Ser/Thr protein 86.1 0.42 1.4E-05 47.1 3.4 34 460-494 30-63 (348)
124 4dc2_A Protein kinase C IOTA t 86.1 0.45 1.5E-05 48.9 3.8 34 460-494 51-86 (396)
125 3fhr_A MAP kinase-activated pr 86.1 0.41 1.4E-05 47.4 3.4 35 460-495 27-64 (336)
126 2j7t_A Serine/threonine-protei 86.0 0.52 1.8E-05 45.3 4.0 35 460-495 18-54 (302)
127 4aaa_A Cyclin-dependent kinase 85.9 0.54 1.8E-05 46.2 4.2 34 461-495 25-60 (331)
128 3txo_A PKC-L, NPKC-ETA, protei 85.9 0.38 1.3E-05 48.4 3.0 34 460-494 22-57 (353)
129 1luf_A Muscle-specific tyrosin 85.8 0.47 1.6E-05 46.5 3.6 37 459-496 45-88 (343)
130 3oja_B Anopheles plasmodium-re 85.8 14 0.00049 39.3 15.7 26 394-419 542-567 (597)
131 3kvw_A DYRK2, dual specificity 85.8 0.46 1.6E-05 49.1 3.7 34 461-495 97-132 (429)
132 2fxo_A Myosin heavy chain, car 85.8 16 0.00055 31.3 18.9 87 331-417 25-118 (129)
133 3i6u_A CDS1, serine/threonine- 85.7 0.54 1.9E-05 48.3 4.2 35 459-494 133-169 (419)
134 1p4o_A Insulin-like growth fac 85.7 0.29 1E-05 47.7 2.0 44 451-495 15-65 (322)
135 1zth_A RIO1 serine protein kin 85.7 0.58 2E-05 44.7 4.1 29 465-494 51-83 (258)
136 2fst_X Mitogen-activated prote 85.6 0.46 1.6E-05 47.9 3.5 35 460-495 28-64 (367)
137 4ejn_A RAC-alpha serine/threon 85.6 0.45 1.5E-05 49.2 3.5 34 460-494 147-182 (446)
138 3op5_A Serine/threonine-protei 85.3 0.44 1.5E-05 47.6 3.2 36 459-495 33-75 (364)
139 3tnu_A Keratin, type I cytoske 85.3 9.3 0.00032 32.9 11.3 74 347-420 31-115 (131)
140 2r5t_A Serine/threonine-protei 85.3 0.56 1.9E-05 47.6 4.0 34 460-494 37-72 (373)
141 3l9p_A Anaplastic lymphoma kin 85.2 0.56 1.9E-05 47.2 3.9 34 461-495 71-111 (367)
142 1phk_A Phosphorylase kinase; g 85.2 0.53 1.8E-05 45.1 3.6 35 460-495 16-52 (298)
143 3ll6_A Cyclin G-associated kin 85.1 0.54 1.8E-05 45.7 3.7 34 460-494 27-62 (337)
144 2psq_A Fibroblast growth facto 85.1 0.68 2.3E-05 46.6 4.5 35 461-496 81-124 (370)
145 3rp9_A Mitogen-activated prote 85.0 0.44 1.5E-05 49.3 3.1 35 460-495 52-88 (458)
146 1t4h_A Serine/threonine-protei 84.9 0.56 1.9E-05 44.9 3.6 30 464-494 29-60 (290)
147 3qyz_A Mitogen-activated prote 84.7 0.57 2E-05 46.8 3.7 36 459-495 25-62 (364)
148 2pvf_A Fibroblast growth facto 84.6 0.75 2.6E-05 45.2 4.5 36 460-496 34-78 (334)
149 1t46_A HOMO sapiens V-KIT hard 84.6 0.7 2.4E-05 44.5 4.2 36 460-496 22-64 (313)
150 2w1i_A JAK2; chromosomal rearr 84.5 0.62 2.1E-05 45.6 3.8 34 461-495 41-80 (326)
151 3lxl_A Tyrosine-protein kinase 84.3 0.5 1.7E-05 46.2 3.0 34 461-495 23-62 (327)
152 2qr7_A Ribosomal protein S6 ki 84.3 0.58 2E-05 46.7 3.5 35 460-495 21-57 (342)
153 3lm5_A Serine/threonine-protei 84.3 0.5 1.7E-05 46.5 3.0 28 467-495 35-64 (327)
154 3a62_A Ribosomal protein S6 ki 84.2 0.57 1.9E-05 46.2 3.4 34 461-495 17-55 (327)
155 2efr_A General control protein 84.2 22 0.00076 31.6 20.6 17 317-333 26-42 (155)
156 3lxp_A Non-receptor tyrosine-p 84.1 0.92 3.2E-05 44.2 4.8 33 463-496 33-71 (318)
157 1rdq_E PKA C-alpha, CAMP-depen 84.1 0.69 2.4E-05 46.3 4.0 33 461-494 41-75 (350)
158 3og7_A AKAP9-BRAF fusion prote 84.0 0.52 1.8E-05 45.3 2.9 33 461-495 24-56 (289)
159 3p23_A Serine/threonine-protei 84.0 0.42 1.4E-05 49.6 2.4 36 459-495 22-58 (432)
160 3tt0_A Basic fibroblast growth 83.9 0.67 2.3E-05 46.7 3.8 36 460-496 68-112 (382)
161 3n9x_A Phosphotransferase; mal 83.9 0.54 1.8E-05 48.5 3.2 35 460-495 25-61 (432)
162 3c4z_A Rhodopsin kinase; Ser/T 83.9 0.67 2.3E-05 49.8 4.0 33 461-494 185-219 (543)
163 2i0e_A Protein kinase C-beta I 83.8 0.39 1.3E-05 48.3 2.0 34 460-494 19-54 (353)
164 4e5w_A Tyrosine-protein kinase 83.7 0.72 2.5E-05 44.2 3.8 33 462-495 22-60 (302)
165 1q8y_A SR protein kinase; tran 83.7 0.66 2.3E-05 46.0 3.7 34 461-495 19-54 (373)
166 2ivs_A Proto-oncogene tyrosine 83.7 0.42 1.4E-05 46.2 2.1 36 460-496 22-64 (314)
167 1rjb_A FL cytokine receptor; k 83.6 0.65 2.2E-05 45.6 3.5 36 459-495 43-85 (344)
168 3eqc_A Dual specificity mitoge 83.5 0.72 2.5E-05 45.8 3.8 34 461-495 33-68 (360)
169 2buj_A Serine/threonine-protei 83.5 0.65 2.2E-05 45.0 3.4 33 461-494 29-63 (317)
170 3c0i_A Peripheral plasma membr 83.3 0.68 2.3E-05 46.2 3.5 33 461-494 24-58 (351)
171 3ttj_A Mitogen-activated prote 83.1 0.66 2.3E-05 48.5 3.5 35 460-495 61-97 (464)
172 2h34_A Serine/threonine-protei 82.9 0.75 2.6E-05 44.7 3.6 35 460-495 33-69 (309)
173 2bdw_A Hypothetical protein K1 82.9 0.62 2.1E-05 46.8 3.1 36 459-495 27-64 (362)
174 4gyi_A RIO2 kinase; protein ki 82.8 0.79 2.7E-05 47.3 3.9 31 463-494 97-128 (397)
175 2acx_A G protein-coupled recep 82.7 0.68 2.3E-05 50.2 3.5 34 460-494 183-218 (576)
176 2xrw_A Mitogen-activated prote 82.7 0.74 2.5E-05 46.2 3.6 35 460-495 24-60 (371)
177 3uto_A Twitchin; kinase, muscl 82.6 0.67 2.3E-05 50.0 3.4 34 461-495 157-192 (573)
178 3pfq_A PKC-B, PKC-beta, protei 82.3 0.79 2.7E-05 50.5 3.9 34 460-494 340-375 (674)
179 2i1j_A Moesin; FERM, coiled-co 82.2 0.75 2.6E-05 49.9 3.6 25 7-32 15-39 (575)
180 2yfx_A Tyrosine-protein kinase 82.0 0.87 3E-05 44.5 3.7 35 460-495 29-70 (327)
181 2ozo_A Tyrosine-protein kinase 81.8 0.77 2.6E-05 49.9 3.5 27 468-495 343-373 (613)
182 3qup_A Tyrosine-protein kinase 81.8 0.62 2.1E-05 45.4 2.5 36 459-495 21-61 (323)
183 3u1c_A Tropomyosin alpha-1 cha 81.7 20 0.00069 29.3 14.1 55 375-429 37-91 (101)
184 3oja_A Leucine-rich immune mol 81.6 29 0.00099 36.0 15.6 6 37-42 36-41 (487)
185 3pls_A Macrophage-stimulating 81.5 1.1 3.6E-05 42.9 4.0 32 463-495 23-59 (298)
186 1uix_A RHO-associated kinase; 81.3 17 0.00057 28.0 10.3 66 355-420 5-70 (71)
187 2wei_A Calmodulin-domain prote 81.2 0.8 2.7E-05 43.8 3.0 34 460-494 21-56 (287)
188 1nxk_A MAP kinase-activated pr 81.0 0.86 3E-05 46.5 3.4 27 467-494 68-96 (400)
189 1ni5_A Putative cell cycle pro 80.9 1.5 5.1E-05 45.7 5.1 39 4-43 12-51 (433)
190 3hnw_A Uncharacterized protein 80.8 25 0.00086 30.6 12.2 50 346-395 81-130 (138)
191 3m2w_A MAP kinase-activated pr 80.7 0.94 3.2E-05 43.7 3.4 34 461-495 17-53 (299)
192 3s4r_A Vimentin; alpha-helix, 80.7 14 0.00048 29.9 9.9 79 352-430 7-90 (93)
193 3q5i_A Protein kinase; CDPK, m 80.6 1 3.5E-05 47.3 3.8 35 459-494 34-70 (504)
194 1kob_A Twitchin; kinase, intra 80.6 0.89 3E-05 46.3 3.3 35 460-495 50-86 (387)
195 2q6q_A Spindle POLE BODY compo 80.1 13 0.00044 28.2 8.5 59 340-398 3-61 (74)
196 2y4i_B KSR2, HKSR2, kinase sup 80.1 1.3 4.3E-05 42.9 4.1 33 460-494 32-64 (319)
197 3brb_A Proto-oncogene tyrosine 80.1 1 3.5E-05 43.6 3.4 36 459-495 32-72 (313)
198 2v71_A Nuclear distribution pr 79.8 37 0.0013 31.1 21.6 66 349-414 90-155 (189)
199 3mwu_A Calmodulin-domain prote 79.7 1.1 3.8E-05 46.7 3.8 33 461-494 22-56 (486)
200 1k92_A Argininosuccinate synth 79.7 6.8 0.00023 41.1 9.6 35 4-43 9-43 (455)
201 4e7w_A Glycogen synthase kinas 79.6 0.89 3E-05 46.2 2.9 33 462-495 41-74 (394)
202 2b9c_A Striated-muscle alpha t 79.1 33 0.0011 30.1 12.8 27 342-368 40-66 (147)
203 2eu9_A Dual specificity protei 79.0 1.1 3.6E-05 43.9 3.2 34 461-495 19-55 (355)
204 3nyv_A Calmodulin-domain prote 79.0 0.99 3.4E-05 47.0 3.1 33 461-494 26-60 (484)
205 3gni_B Strad alpha; kinase fol 78.8 1.1 3.7E-05 45.1 3.2 35 460-495 24-62 (389)
206 1xbb_A Tyrosine-protein kinase 78.7 1.2 4E-05 42.7 3.3 33 462-495 17-54 (291)
207 2i1m_A Macrophage colony-stimu 78.6 1.8 6.1E-05 42.2 4.6 37 459-496 44-87 (333)
208 3lb7_A RAF proto-oncogene seri 78.6 1.1 3.7E-05 43.7 3.0 33 461-495 36-68 (307)
209 3mq9_A Bone marrow stromal ant 78.3 27 0.00093 36.1 14.0 66 364-429 400-469 (471)
210 2owb_A Serine/threonine-protei 77.9 1.1 3.8E-05 44.0 3.0 34 460-494 40-75 (335)
211 2jii_A Serine/threonine-protei 77.7 0.96 3.3E-05 44.8 2.4 34 461-495 42-85 (352)
212 3ghg_A Fibrinogen alpha chain; 77.3 34 0.0012 36.0 13.8 45 358-402 114-158 (562)
213 3f66_A Hepatocyte growth facto 77.0 1.6 5.4E-05 41.8 3.7 32 463-495 27-63 (298)
214 3lij_A Calcium/calmodulin depe 76.9 1.4 5E-05 46.0 3.6 34 460-494 36-71 (494)
215 2v62_A Serine/threonine-protei 76.3 1 3.4E-05 44.6 2.1 34 461-495 37-75 (345)
216 2v71_A Nuclear distribution pr 75.8 48 0.0017 30.3 20.3 81 346-429 55-135 (189)
217 4fl3_A Tyrosine-protein kinase 75.7 1.3 4.6E-05 48.2 3.1 28 467-495 375-406 (635)
218 3bl5_A Queuosine biosynthesis 75.7 17 0.00058 33.1 10.3 34 5-43 3-36 (219)
219 1ic2_A Tropomyosin alpha chain 75.5 27 0.00093 27.3 11.2 30 381-410 40-69 (81)
220 3c1x_A Hepatocyte growth facto 75.2 2.2 7.4E-05 43.0 4.3 32 463-495 91-127 (373)
221 1fvr_A Tyrosine-protein kinase 74.4 1.8 6.2E-05 42.1 3.4 34 461-495 25-62 (327)
222 2v66_B Nuclear distribution pr 74.3 38 0.0013 28.4 13.5 66 349-414 37-102 (111)
223 2pzi_A Probable serine/threoni 74.2 1.6 5.4E-05 47.8 3.2 34 461-495 80-116 (681)
224 3hnw_A Uncharacterized protein 73.5 31 0.001 30.0 10.7 11 321-331 60-70 (138)
225 1u46_A ACK-1, activated CDC42 73.1 1.6 5.5E-05 41.4 2.5 34 461-495 18-56 (291)
226 3mq9_A Bone marrow stromal ant 72.7 90 0.0031 32.0 17.5 68 342-412 399-466 (471)
227 3u59_A Tropomyosin beta chain; 71.6 40 0.0014 27.5 14.1 46 384-429 46-91 (101)
228 3bas_A Myosin heavy chain, str 71.4 37 0.0013 27.1 11.2 36 348-383 22-57 (89)
229 2v66_B Nuclear distribution pr 70.2 47 0.0016 27.8 14.4 18 406-423 59-76 (111)
230 3o0z_A RHO-associated protein 68.9 65 0.0022 28.9 19.1 73 341-420 63-135 (168)
231 1kor_A Argininosuccinate synth 68.9 16 0.00056 37.4 9.2 34 6-43 1-34 (400)
232 3oja_A Leucine-rich immune mol 67.8 99 0.0034 31.9 15.2 47 358-404 432-478 (487)
233 4fla_A Regulation of nuclear P 67.7 55 0.0019 28.9 11.1 59 327-385 83-145 (152)
234 2nz2_A Argininosuccinate synth 67.2 14 0.00048 38.1 8.3 34 5-43 5-38 (413)
235 3i00_A HIP-I, huntingtin-inter 66.9 58 0.002 27.6 10.8 15 388-402 46-60 (120)
236 3en9_A Glycoprotease, O-sialog 66.5 2.6 8.9E-05 45.0 2.7 30 464-494 339-368 (540)
237 3haj_A Human pacsin2 F-BAR; pa 66.4 1.3E+02 0.0044 31.3 16.2 7 352-358 155-161 (486)
238 2fxo_A Myosin heavy chain, car 65.9 62 0.0021 27.5 18.6 36 381-416 89-124 (129)
239 3ghg_A Fibrinogen alpha chain; 65.9 93 0.0032 32.8 13.9 14 271-284 46-59 (562)
240 1sur_A PAPS reductase; assimil 65.5 20 0.0007 32.8 8.4 34 6-44 45-78 (215)
241 2b5u_A Colicin E3; high resolu 65.1 59 0.002 34.0 12.1 17 406-422 405-421 (551)
242 2j0j_A Focal adhesion kinase 1 64.7 4.2 0.00014 44.4 3.9 35 460-495 389-428 (656)
243 2b9c_A Striated-muscle alpha t 64.7 73 0.0025 27.9 15.9 54 349-402 61-114 (147)
244 3nmd_A CGMP dependent protein 64.1 22 0.00075 27.4 6.7 25 391-415 42-66 (72)
245 2pg3_A Queuosine biosynthesis 63.5 37 0.0013 31.3 9.9 33 6-43 3-35 (232)
246 1s1c_X RHO-associated, coiled- 62.7 50 0.0017 25.3 9.9 63 356-420 8-70 (71)
247 2ocy_A RAB guanine nucleotide 61.3 87 0.003 27.7 13.5 35 327-361 59-93 (154)
248 3hhm_B NISH2 P85alpha; PI3KCA, 60.7 1.5E+02 0.005 30.0 14.4 62 357-425 201-262 (373)
249 2i1j_A Moesin; FERM, coiled-co 60.2 14 0.00046 39.9 6.8 41 374-414 404-444 (575)
250 3nmd_A CGMP dependent protein 59.7 38 0.0013 26.1 7.3 21 378-398 43-63 (72)
251 2xry_A Deoxyribodipyrimidine p 57.9 24 0.00081 37.0 8.1 84 21-129 53-136 (482)
252 1zun_A Sulfate adenylyltransfe 57.5 25 0.00084 35.0 7.8 38 5-43 46-83 (325)
253 3ol1_A Vimentin; structural ge 56.8 87 0.003 26.2 13.4 28 327-354 49-76 (119)
254 2v4h_A NF-kappa-B essential mo 56.5 86 0.0029 26.1 11.2 11 356-366 64-74 (110)
255 1vl2_A Argininosuccinate synth 56.4 49 0.0017 34.1 10.0 34 5-43 14-47 (421)
256 3tnu_A Keratin, type I cytoske 54.0 89 0.0031 26.5 9.8 73 329-404 9-81 (131)
257 2dpl_A GMP synthetase, GMP syn 53.9 64 0.0022 31.5 10.1 36 5-44 20-55 (308)
258 3i00_A HIP-I, huntingtin-inter 53.8 1E+02 0.0034 26.1 10.8 64 353-419 21-84 (120)
259 2ywb_A GMP synthase [glutamine 53.4 45 0.0015 35.1 9.4 34 5-43 209-242 (503)
260 2c5s_A THII, probable thiamine 52.9 83 0.0028 32.1 11.1 35 5-44 187-221 (413)
261 3cvf_A Homer-3, homer protein 52.1 84 0.0029 24.6 8.3 24 365-388 10-33 (79)
262 3tqi_A GMP synthase [glutamine 51.1 22 0.00077 37.7 6.6 35 5-43 230-264 (527)
263 1cxz_B Protein (PKN); protein- 50.7 44 0.0015 26.6 6.6 45 336-384 35-79 (86)
264 1gmj_A ATPase inhibitor; coile 50.2 93 0.0032 24.6 8.8 29 342-370 46-74 (84)
265 2der_A TRNA-specific 2-thiouri 50.0 56 0.0019 33.1 9.2 38 1-43 13-50 (380)
266 3umv_A Deoxyribodipyrimidine p 49.3 32 0.0011 36.4 7.5 82 21-126 54-135 (506)
267 1f5n_A Interferon-induced guan 49.2 2.2E+02 0.0075 30.6 14.1 12 150-163 173-184 (592)
268 2b5u_A Colicin E3; high resolu 48.2 2E+02 0.0068 30.2 12.7 34 348-381 343-376 (551)
269 4etp_A Kinesin-like protein KA 48.1 45 0.0015 34.2 8.1 25 375-399 17-41 (403)
270 1d7m_A Cortexillin I; coiled-c 48.1 1E+02 0.0036 24.5 12.4 21 353-373 17-37 (101)
271 3hhm_B NISH2 P85alpha; PI3KCA, 47.9 2.2E+02 0.0077 28.6 13.2 47 369-415 199-245 (373)
272 1o97_C Electron transferring f 47.8 84 0.0029 30.1 9.6 80 15-132 36-124 (264)
273 1x8y_A Lamin A/C; structural p 46.9 1E+02 0.0036 24.2 8.7 46 382-427 28-73 (86)
274 2e7s_A RAB guanine nucleotide 46.3 1E+02 0.0036 26.5 8.8 30 331-360 51-80 (135)
275 4etp_A Kinesin-like protein KA 44.9 53 0.0018 33.6 8.1 53 378-430 6-58 (403)
276 1efp_B ETF, protein (electron 44.6 1.9E+02 0.0065 27.3 11.5 25 108-132 101-125 (252)
277 2hma_A Probable tRNA (5-methyl 44.1 69 0.0023 32.3 8.7 36 4-44 8-43 (376)
278 3efg_A Protein SLYX homolog; x 43.4 96 0.0033 24.1 7.5 41 375-415 14-54 (78)
279 1efv_B Electron transfer flavo 43.1 1.8E+02 0.006 27.7 11.0 25 108-132 104-128 (255)
280 2yy0_A C-MYC-binding protein; 41.8 36 0.0012 24.5 4.4 30 354-383 19-48 (53)
281 3cve_A Homer protein homolog 1 41.3 1.2E+02 0.0041 23.3 10.3 29 344-372 18-46 (72)
282 1np7_A DNA photolyase; protein 40.4 93 0.0032 32.4 9.3 104 3-127 3-107 (489)
283 3cvf_A Homer-3, homer protein 39.1 1.4E+02 0.0047 23.4 9.9 30 344-373 24-53 (79)
284 3u06_A Protein claret segregat 38.5 75 0.0026 32.6 8.0 9 391-399 33-41 (412)
285 3mq7_A Bone marrow stromal ant 38.4 1.8E+02 0.006 24.4 12.3 12 289-300 30-41 (121)
286 1gpm_A GMP synthetase, XMP ami 38.1 77 0.0026 33.5 8.3 35 5-43 227-261 (525)
287 1vbk_A Hypothetical protein PH 37.4 1.7E+02 0.006 28.4 10.3 33 5-43 179-211 (307)
288 3haj_A Human pacsin2 F-BAR; pa 37.0 3.7E+02 0.013 27.7 17.7 22 387-408 215-236 (486)
289 2eqb_B RAB guanine nucleotide 36.7 1.7E+02 0.0058 23.7 14.1 37 363-399 28-64 (97)
290 2wsi_A FAD synthetase; transfe 35.4 1.2E+02 0.004 29.6 8.6 25 107-131 143-168 (306)
291 2j07_A Deoxyribodipyrimidine p 35.2 88 0.003 32.0 8.0 41 84-127 54-94 (420)
292 3q8t_A Beclin-1; autophagy, AT 35.2 1.7E+02 0.006 23.4 13.2 24 392-415 70-93 (96)
293 3ibp_A Chromosome partition pr 34.2 3.4E+02 0.012 26.5 11.6 39 389-431 66-104 (302)
294 1wt6_A Myotonin-protein kinase 33.9 1.7E+02 0.0058 22.9 9.5 20 377-396 40-59 (81)
295 3u06_A Protein claret segregat 33.7 1.1E+02 0.0038 31.3 8.4 21 344-364 7-27 (412)
296 3fy4_A 6-4 photolyase; DNA rep 33.7 77 0.0026 33.7 7.4 41 85-128 71-111 (537)
297 2efl_A Formin-binding protein 33.4 3.1E+02 0.011 25.8 18.5 26 345-370 135-160 (305)
298 2no2_A HIP-I, huntingtin-inter 33.2 2E+02 0.0069 23.6 13.5 15 406-420 85-99 (107)
299 3qwe_A GMIP, GEM-interacting p 32.9 3.4E+02 0.012 26.1 15.7 46 284-335 108-153 (279)
300 1wt6_A Myotonin-protein kinase 32.2 1.8E+02 0.0062 22.7 9.0 10 347-356 31-40 (81)
301 3a7p_A Autophagy protein 16; c 31.9 2.6E+02 0.009 24.5 11.7 37 346-382 74-110 (152)
302 4h22_A Leucine-rich repeat fli 31.9 89 0.003 25.7 5.7 26 346-371 43-68 (103)
303 1m1j_B Fibrinogen beta chain; 31.8 4.6E+02 0.016 27.2 15.0 20 451-470 214-233 (464)
304 3uux_B Mitochondrial division 31.7 3.3E+02 0.011 25.7 11.6 60 359-418 154-213 (242)
305 2oq2_A Phosphoadenosine phosph 31.5 1.4E+02 0.0048 28.2 8.3 35 6-42 42-76 (261)
306 3mq7_A Bone marrow stromal ant 30.8 2.4E+02 0.0081 23.6 12.0 8 304-311 10-17 (121)
307 3ter_A Mammalian stromal inter 30.4 1.4E+02 0.0048 25.7 7.0 32 389-420 45-76 (136)
308 2j4d_A Cryptochrome 3, cryptoc 30.1 1.7E+02 0.0058 30.8 9.4 41 84-127 102-142 (525)
309 3rjz_A N-type ATP pyrophosphat 30.1 2E+02 0.0069 27.0 8.9 94 6-130 5-100 (237)
310 3swk_A Vimentin; cytoskeleton, 29.9 2E+02 0.0069 22.6 11.1 27 327-353 29-55 (86)
311 3lqk_A Dipicolinate synthase s 29.2 47 0.0016 30.6 4.2 38 1-40 3-41 (201)
312 2oqq_A Transcription factor HY 28.4 1.4E+02 0.0049 20.3 5.9 23 378-400 6-28 (42)
313 1gk4_A Vimentin; intermediate 27.3 2.2E+02 0.0075 22.1 11.9 46 382-427 26-71 (84)
314 3k29_A Putative uncharacterize 27.1 3.4E+02 0.011 24.2 16.0 70 351-420 52-130 (169)
315 2wq7_A RE11660P; lyase-DNA com 26.9 1.8E+02 0.0061 30.8 8.8 85 21-127 45-131 (543)
316 1m1j_C Fibrinogen gamma chain; 26.9 5.2E+02 0.018 26.3 13.2 26 374-399 90-115 (409)
317 3efg_A Protein SLYX homolog; x 26.8 2.1E+02 0.0073 22.1 7.0 44 379-422 11-54 (78)
318 2zqm_A Prefoldin beta subunit 26.2 2.6E+02 0.0088 22.5 11.2 34 379-412 74-107 (117)
319 2z5i_A TM, general control pro 26.1 1.1E+02 0.0038 21.8 4.8 41 327-367 6-46 (52)
320 3zqu_A Probable aromatic acid 25.3 82 0.0028 29.1 5.1 38 1-41 1-38 (209)
321 3mcu_A Dipicolinate synthase, 24.1 62 0.0021 30.0 4.0 39 1-41 1-40 (207)
322 2zqm_A Prefoldin beta subunit 24.0 1.9E+02 0.0065 23.4 6.8 8 392-399 73-80 (117)
323 3ol1_A Vimentin; structural ge 23.2 3.2E+02 0.011 22.6 14.0 43 357-399 44-93 (119)
324 1fxk_A Prefoldin; archaeal pro 23.0 1.5E+02 0.0052 23.6 5.9 41 355-395 2-42 (107)
325 2x3v_A Syndapin I, protein kin 22.2 5.3E+02 0.018 24.7 17.0 134 293-431 77-218 (337)
326 2ke4_A CDC42-interacting prote 22.2 3.1E+02 0.011 22.1 9.1 19 327-345 23-41 (98)
327 4fla_A Regulation of nuclear P 22.1 3.9E+02 0.013 23.3 11.2 60 358-420 79-138 (152)
328 3tvs_A Cryptochrome-1; circadi 22.1 1.7E+02 0.0058 31.0 7.5 83 21-126 20-105 (538)
329 2efk_A CDC42-interacting prote 21.9 4.9E+02 0.017 24.3 18.6 134 293-431 67-200 (301)
330 3tqr_A Phosphoribosylglycinami 21.8 3.3E+02 0.011 25.0 8.6 88 1-129 1-92 (215)
331 4h22_A Leucine-rich repeat fli 21.4 3.4E+02 0.012 22.2 10.2 24 360-383 29-52 (103)
332 1lwu_C Fibrinogen gamma chain; 21.4 2.1E+02 0.0073 28.2 7.5 7 487-493 114-120 (323)
333 3q0x_A Centriole protein; cent 21.2 3.7E+02 0.013 25.2 8.7 15 407-421 203-217 (228)
334 3abh_A Pacsin2, protein kinase 21.1 5.3E+02 0.018 24.4 15.9 18 349-366 159-176 (312)
335 3m91_A Proteasome-associated A 21.0 2.3E+02 0.0079 20.1 6.7 11 404-414 38-48 (51)
336 3exr_A RMPD (hexulose-6-phosph 20.8 1.7E+02 0.0057 27.0 6.3 38 1-44 1-38 (221)
337 1owl_A Photolyase, deoxyribodi 20.7 1.5E+02 0.0052 30.8 6.7 39 86-127 61-99 (484)
338 1f5n_A Interferon-induced guan 20.6 7.9E+02 0.027 26.2 18.0 13 288-300 383-395 (592)
339 3qja_A IGPS, indole-3-glycerol 20.5 2.5E+02 0.0086 26.8 7.7 72 84-166 151-222 (272)
340 2jee_A YIIU; FTSZ, septum, coi 20.5 3.1E+02 0.011 21.4 10.8 12 408-419 53-64 (81)
341 3n0v_A Formyltetrahydrofolate 20.4 5.3E+02 0.018 24.7 10.1 83 5-129 90-175 (286)
342 3jsv_C NF-kappa-B essential mo 20.3 3.4E+02 0.012 21.8 10.2 19 346-364 15-33 (94)
343 1iv0_A Hypothetical protein; r 20.2 57 0.0019 26.4 2.6 23 107-129 38-60 (98)
344 1cii_A Colicin IA; bacteriocin 20.1 7.5E+02 0.026 25.7 14.9 11 36-46 13-23 (602)
345 1u3d_A Cryptochrome 1 apoprote 20.1 3.4E+02 0.012 28.2 9.4 42 84-127 67-108 (509)
346 3iv1_A Tumor susceptibility ge 20.0 3.1E+02 0.011 21.3 10.3 15 286-300 9-23 (78)
No 1
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=99.85 E-value=1.6e-20 Score=170.77 Aligned_cols=154 Identities=16% Similarity=0.060 Sum_probs=115.5
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCC--cccccCCCC--C-CCCcCChHHHHHHHHH
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIK--DFVYTPFGK--L-PATSLSDEKLEILKKY 75 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~--~~i~~~~~~--~-p~~~~~~~~~~~~~~~ 75 (505)
|....++||||||+|+. |..||+||+.++...++.|++|||.++.... .+.+..... + |. ....+..+.+.
T Consensus 1 M~~~~~~ILv~vD~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 76 (162)
T 1mjh_A 1 MSVMYKKILYPTDFSET-AEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKS---VEEFENELKNK 76 (162)
T ss_dssp --CCCCEEEEECCSCHH-HHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC--------------------CHHHHHHHHHH
T ss_pred CccccceEEEEeCCCHH-HHHHHHHHHHHHhhcCCeEEEEEEecCccccccccccccccccccccc---hhhhHHHHHHH
Confidence 66668999999999999 9999999999999889999999998763000 000000000 1 11 10112334455
Q ss_pred HHHHHHHHHHHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCC
Q 010658 76 EQGKTDNLLSKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMP 153 (505)
Q Consensus 76 ~~~~~~~lL~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap 153 (505)
..+.+++.|+.+...+. ++.+++.+..| +|++.|+++|+++++|+||||++|++++ ++.+.||++.+|++++|
T Consensus 77 ~~~~~~~~l~~~~~~~~~~g~~~~~~v~~G---~~~~~I~~~a~~~~~dlIV~G~~g~~~~--~~~~~GSv~~~vl~~~~ 151 (162)
T 1mjh_A 77 LTEEAKNKMENIKKELEDVGFKVKDIIVVG---IPHEEIVKIAEDEGVDIIIMGSHGKTNL--KEILLGSVTENVIKKSN 151 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---CHHHHHHHHHHHTTCSEEEEESCCSSCC--TTCSSCHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEEEEcCC---CHHHHHHHHHHHcCCCEEEEcCCCCCCc--cceEecchHHHHHHhCC
Confidence 56778888888888776 56677777665 8999999999999999999999998887 78889999999999998
Q ss_pred CceEEEEEeCCe
Q 010658 154 DYCELFIICGGK 165 (505)
Q Consensus 154 ~~C~V~vV~kgk 165 (505)
|||+||..++
T Consensus 152 --~pVlvv~~~~ 161 (162)
T 1mjh_A 152 --KPVLVVKRKN 161 (162)
T ss_dssp --SCEEEECCCC
T ss_pred --CCEEEEeCCC
Confidence 9999997653
No 2
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=99.83 E-value=8.6e-20 Score=162.61 Aligned_cols=139 Identities=14% Similarity=0.150 Sum_probs=115.0
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNL 83 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 83 (505)
..++||||||+|+. |..||+||+.++...++.|++|||.++.. +.+.. . ......+.+...+.+++.
T Consensus 4 ~~~~ILv~~D~s~~-s~~al~~A~~la~~~~a~l~ll~v~~~~~---~~~~~-----~----~~~~~~~~~~~~~~~~~~ 70 (146)
T 3s3t_A 4 RYTNILVPVDSSDA-AQAAFTEAVNIAQRHQANLTALYVVDDSA---YHTPA-----L----DPVLSELLDAEAAHAKDA 70 (146)
T ss_dssp CCCEEEEECCSSHH-HHHHHHHHHHHHHHHTCEEEEEEEEECCC---CCCGG-----G----HHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCHH-HHHHHHHHHHHHHhcCCEEEEEEEecCcc---ccccc-----c----ccccHHHHHHHHHHHHHH
Confidence 46899999999999 99999999999998899999999988743 11100 0 001233455567778889
Q ss_pred HHHHHhhhc--cC-ccEEEEEecCCCChHHHHHH-HHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEE
Q 010658 84 LSKYLGFCG--KV-KAEILKVEKSDEPVHKLILD-LVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELF 159 (505)
Q Consensus 84 L~~~~~~c~--~v-~ve~~vve~~~~d~~~~Ive-~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~ 159 (505)
|+.+...+. ++ .+++.+..| +|++.|++ +|+++++|+||||++|++.+ .+.+.||++.+|++++| |||+
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~~g---~~~~~I~~~~a~~~~~dliV~G~~~~~~~--~~~~~Gs~~~~vl~~~~--~pVl 143 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEISYG---IPKHTIEDYAKQHPEIDLIVLGATGTNSP--HRVAVGSTTSYVVDHAP--CNVI 143 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEE---CHHHHHHHHHHHSTTCCEEEEESCCSSCT--TTCSSCHHHHHHHHHCS--SEEE
T ss_pred HHHHHHHHHhcCCcceEEEEecC---ChHHHHHHHHHhhcCCCEEEECCCCCCCc--ceEEEcchHHHHhccCC--CCEE
Confidence 999988887 56 778888876 79999999 99999999999999998887 77889999999999999 9999
Q ss_pred EEe
Q 010658 160 IIC 162 (505)
Q Consensus 160 vV~ 162 (505)
||.
T Consensus 144 vV~ 146 (146)
T 3s3t_A 144 VIR 146 (146)
T ss_dssp EEC
T ss_pred EeC
Confidence 984
No 3
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=99.82 E-value=3.6e-20 Score=165.05 Aligned_cols=141 Identities=13% Similarity=0.083 Sum_probs=109.6
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
+++||||||+|+. |..|++||+.++...++.|++|||.++.. ......+..+..... .+.+...+.+++.|
T Consensus 2 ~~~ILv~vD~s~~-s~~al~~A~~la~~~~a~l~ll~v~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l 72 (147)
T 3hgm_A 2 FNRIMVPVDGSKG-AVKALEKGVGLQQLTGAELYILCVFKHHS---LLEASLSMARPEQLD-----IPDDALKDYATEIA 72 (147)
T ss_dssp CSEEEEECCSBHH-HHHHHHHHHHHHHHHCCEEEEEEEECCHH---HHHHTBSSCCCGGGC-----CCTTHHHHHHHHHH
T ss_pred CceEEEEeCCCHH-HHHHHHHHHHHHHhcCCEEEEEEEecCcc---cccccccccChhhhh-----hHHHHHHHHHHHHH
Confidence 5899999999998 99999999999998899999999987631 111111111111100 01122355677788
Q ss_pred HHHHhhhc--cCcc---EEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEE
Q 010658 85 SKYLGFCG--KVKA---EILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELF 159 (505)
Q Consensus 85 ~~~~~~c~--~v~v---e~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~ 159 (505)
+.+...+. ++.+ ++.+..| +|++.|+++|+++++|+||||++|++++ .+.+.||++.+|++++| |||+
T Consensus 73 ~~~~~~~~~~g~~~~~~~~~~~~g---~~~~~I~~~a~~~~~dliV~G~~~~~~~--~~~~~Gs~~~~vl~~~~--~pVl 145 (147)
T 3hgm_A 73 VQAKTRATELGVPADKVRAFVKGG---RPSRTIVRFARKRECDLVVIGAQGTNGD--KSLLLGSVAQRVAGSAH--CPVL 145 (147)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEES---CHHHHHHHHHHHTTCSEEEECSSCTTCC--SCCCCCHHHHHHHHHCS--SCEE
T ss_pred HHHHHHHHhcCCCccceEEEEecC---CHHHHHHHHHHHhCCCEEEEeCCCCccc--cceeeccHHHHHHhhCC--CCEE
Confidence 88887776 6666 7777775 8999999999999999999999998887 77889999999999999 9999
Q ss_pred EE
Q 010658 160 II 161 (505)
Q Consensus 160 vV 161 (505)
||
T Consensus 146 vV 147 (147)
T 3hgm_A 146 VV 147 (147)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 4
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=99.82 E-value=1.8e-19 Score=165.26 Aligned_cols=147 Identities=12% Similarity=0.011 Sum_probs=109.8
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCC------CCcCChHHHHHHHH
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLP------ATSLSDEKLEILKK 74 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p------~~~~~~~~~~~~~~ 74 (505)
|....++||||||+|+. |..||+||+.++...++.|++|||.++.. .+.....++ ..... .+.+
T Consensus 1 M~~m~~~ILv~vD~s~~-s~~al~~A~~la~~~~a~l~ll~v~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~ 70 (170)
T 2dum_A 1 MIFMFRKVLFPTDFSEG-AYRAVEVFEKRNKMEVGEVILLHVIDEGT----LEELMDGYSFFYDNAEIELK-----DIKE 70 (170)
T ss_dssp ---CCSEEEEECCSSHH-HHHHHHHHHHHCCSCCSEEEEEEEEETTG----GGCCC------------CCT-----TSHH
T ss_pred CccccceEEEEecCCHH-HHHHHHHHHHHHHhcCCEEEEEEEecCcc----ccccccccccccccccccHH-----HHHH
Confidence 55668999999999998 99999999999999999999999987642 110100111 00000 1122
Q ss_pred HHHHHHHHHHHHHHhhhc--cCccEE--EEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcc
Q 010658 75 YEQGKTDNLLSKYLGFCG--KVKAEI--LKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHH 150 (505)
Q Consensus 75 ~~~~~~~~lL~~~~~~c~--~v~ve~--~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k 150 (505)
...+.+++.|+.+...+. ++.+++ .+..| +|++.|+++|+++++|+||||++|++.+ .+.+.||++.+|++
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g---~~~~~I~~~a~~~~~DlIV~G~~g~~~~--~~~~~Gsv~~~vl~ 145 (170)
T 2dum_A 71 KLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFG---IPWDEIVKVAEEENVSLIILPSRGKLSL--SHEFLGSTVMRVLR 145 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEEE---CHHHHHHHHHHHTTCSEEEEESCCCCC----TTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceeeeeEEecC---ChHHHHHHHHHHcCCCEEEECCCCCCcc--ccceechHHHHHHH
Confidence 344556777777777765 677777 66665 8999999999999999999999998877 77889999999999
Q ss_pred cCCCceEEEEEeCC
Q 010658 151 HMPDYCELFIICGG 164 (505)
Q Consensus 151 ~Ap~~C~V~vV~kg 164 (505)
++| |||+||..+
T Consensus 146 ~~~--~PVlvv~~~ 157 (170)
T 2dum_A 146 KTK--KPVLIIKEV 157 (170)
T ss_dssp HCS--SCEEEECCC
T ss_pred hCC--CCEEEEccC
Confidence 998 999999754
No 5
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=99.80 E-value=5.2e-19 Score=156.20 Aligned_cols=133 Identities=14% Similarity=0.116 Sum_probs=107.9
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhh-hcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHH-HHHHHH
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKW-KAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQ-GKTDNL 83 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~-~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~l 83 (505)
++||||||+|+. |..|+.||+.++ ...++.|++|||.++.. ..+.. + .....+.+... +.+++.
T Consensus 2 ~~ILv~~D~s~~-s~~al~~a~~la~~~~~a~l~ll~v~~~~~---~~~~~-~---------~~~~~~~~~~~~~~~~~~ 67 (138)
T 3idf_A 2 KKLLFAIDDTEA-CERAAQYILDMFGKDADCTLTLIHVKPEFM---LYGEA-V---------LAAYDEIEMKEEEKAKLL 67 (138)
T ss_dssp EEEEEECCSSHH-HHHHHHHHHHHHTTCTTEEEEEEEEECCCC---CCHHH-H---------HHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCHH-HHHHHHHHHHHhccCCCCEEEEEEEecCCC---ccccc-c---------cCcHHHHHHHHHHHHHHH
Confidence 689999999999 999999999999 88999999999987743 11000 0 00112233344 677888
Q ss_pred HHHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEE
Q 010658 84 LSKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFII 161 (505)
Q Consensus 84 L~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV 161 (505)
|+.+...+. ++.+++.+..| +|++.|+++|+ ++|+||||+++++.+ .+.+ ||++.+|++++| |||++|
T Consensus 68 l~~~~~~~~~~g~~~~~~v~~g---~~~~~I~~~a~--~~dliV~G~~~~~~~--~~~~-Gs~~~~vl~~~~--~pVlvv 137 (138)
T 3idf_A 68 TQKFSTFFTEKGINPFVVIKEG---EPVEMVLEEAK--DYNLLIIGSSENSFL--NKIF-ASHQDDFIQKAP--IPVLIV 137 (138)
T ss_dssp HHHHHHHHHTTTCCCEEEEEES---CHHHHHHHHHT--TCSEEEEECCTTSTT--SSCC-CCTTCHHHHHCS--SCEEEE
T ss_pred HHHHHHHHHHCCCCeEEEEecC---ChHHHHHHHHh--cCCEEEEeCCCcchH--HHHh-CcHHHHHHhcCC--CCEEEe
Confidence 888888886 67778888776 79999999999 999999999998887 6777 999999999999 999998
Q ss_pred e
Q 010658 162 C 162 (505)
Q Consensus 162 ~ 162 (505)
.
T Consensus 138 ~ 138 (138)
T 3idf_A 138 K 138 (138)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=99.80 E-value=3.4e-19 Score=164.30 Aligned_cols=147 Identities=23% Similarity=0.250 Sum_probs=102.4
Q ss_pred CCCEEEEEecCCh---------HhHHHHHHHHHHhhhc---CCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHH
Q 010658 4 EEPKVYVAVGNDL---------QDGYRTLDWTIRKWKA---QSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEI 71 (505)
Q Consensus 4 ~~~kIlVAVDgS~---------~~S~~AL~WAl~~~~~---~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 71 (505)
..++||||||+|+ . |..||.||+.++.. .++.|++|||.++.. ..+ ....+ .......+..
T Consensus 4 ~~~~ILv~vD~s~~~~~~~~~~~-s~~al~~a~~la~~~~~~~a~l~ll~v~~~~~-~~~-~~~~~----~~~~~~~~~~ 76 (175)
T 2gm3_A 4 EPTKVMVAVNASTIKDYPNPSIS-CKRAFEWTLEKIVRSNTSDFKILLLHVQVVDE-DGF-DDVDS----IYASPEDFRD 76 (175)
T ss_dssp -CEEEEEECCBCSSSCTTCBCHH-HHHHHHHHHHHTTTTCTTSEEEEEEEEEC------------C----CCCSHHHHHH
T ss_pred CccEEEEEECCCcccccccccHH-HHHHHHHHHHHhhcccCCCCEEEEEEEeeccc-ccc-ccccc----ccCCHHHHHH
Confidence 3589999999999 8 99999999998754 478999999976532 001 00000 0011222333
Q ss_pred HHHHHHHHHHHHHHHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhc
Q 010658 72 LKKYEQGKTDNLLSKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVH 149 (505)
Q Consensus 72 ~~~~~~~~~~~lL~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~ 149 (505)
+.+...+.+++.|+.+...+. ++.+++.+..| +|++.|+++|.++++|+||||++|++++ ++.+.||++.+|+
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~v~~G---~~~~~I~~~a~~~~~DLIVmG~~g~~~~--~~~~~Gsva~~vl 151 (175)
T 2gm3_A 77 MRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTG---DPKDVICQEVKRVRPDFLVVGSRGLGRF--QKVFVGTVSAFCV 151 (175)
T ss_dssp HTTSHHHHHHHHHHHHHHHHHHHTCEEEEEEEES---CHHHHHHHHHHHHCCSEEEEEECCCC----------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecC---CHHHHHHHHHHHhCCCEEEEeCCCCChh--hhhhcCchHHHHH
Confidence 333345566778888887775 66677777765 8999999999999999999999998887 7788999999999
Q ss_pred ccCCCceEEEEEeCC
Q 010658 150 HHMPDYCELFIICGG 164 (505)
Q Consensus 150 k~Ap~~C~V~vV~kg 164 (505)
++++ |||+||..+
T Consensus 152 ~~a~--~pVlvv~~~ 164 (175)
T 2gm3_A 152 KHAE--CPVMTIKRN 164 (175)
T ss_dssp HHCS--SCEEEEECC
T ss_pred hCCC--CCEEEEcCC
Confidence 9998 999999854
No 7
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=99.80 E-value=6.7e-19 Score=159.11 Aligned_cols=137 Identities=15% Similarity=0.197 Sum_probs=109.6
Q ss_pred CCCEEEEEec--CChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVG--NDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTD 81 (505)
Q Consensus 4 ~~~kIlVAVD--gS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 81 (505)
.+++|||||| +|+. |..|++||+.++...++.|++|||.++.. .+.. + .+.. .+.+...+.++
T Consensus 14 ~~~~ILv~vD~~~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~----~~~~----~--~~~~----~~~~~~~~~~~ 78 (156)
T 3fg9_A 14 VYRRILLTVDEDDNTS-SERAFRYATTLAHDYDVPLGICSVLESED----INIF----D--SLTP----SKIQAKRKHVE 78 (156)
T ss_dssp CCC-EEEECCSCCCHH-HHHHHHHHHHHHHHHTCCEEEEEEECCCC----TTCC----C--SSHH----HHHHHHHHHHH
T ss_pred cCceEEEEECCCCCHH-HHHHHHHHHHHHHhcCCEEEEEEEEeCCC----cccc----c--cCCH----HHHHHHHHHHH
Confidence 4789999999 9999 99999999999998899999999987743 1111 1 0111 23444566778
Q ss_pred HHHHHHHhhhc--cC-ccEEEEEecCCCChHHHHHHH-HHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceE
Q 010658 82 NLLSKYLGFCG--KV-KAEILKVEKSDEPVHKLILDL-VSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCE 157 (505)
Q Consensus 82 ~lL~~~~~~c~--~v-~ve~~vve~~~~d~~~~Ive~-a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~ 157 (505)
+.|+.+...+. ++ .+++.+..+ ++|++.|+++ |+++++|+||||++|++++ ++ +.||++.+|++++| ||
T Consensus 79 ~~l~~~~~~~~~~g~~~~~~~v~~~--g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~--~~-~~Gs~~~~vl~~a~--~P 151 (156)
T 3fg9_A 79 DVVAEYVQLAEQRGVNQVEPLVYEG--GDVDDVILEQVIPEFKPDLLVTGADTEFPH--SK-IAGAIGPRLARKAP--IS 151 (156)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEEEC--SCHHHHHHHTHHHHHCCSEEEEETTCCCTT--SS-SCSCHHHHHHHHCS--SE
T ss_pred HHHHHHHHHHHHcCCCceEEEEEeC--CCHHHHHHHHHHHhcCCCEEEECCCCCCcc--ce-eecchHHHHHHhCC--CC
Confidence 88888887776 56 477777772 3899999999 9999999999999999887 54 79999999999999 99
Q ss_pred EEEEe
Q 010658 158 LFIIC 162 (505)
Q Consensus 158 V~vV~ 162 (505)
|+||.
T Consensus 152 VlvV~ 156 (156)
T 3fg9_A 152 VIVVR 156 (156)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99984
No 8
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=99.80 E-value=4.8e-19 Score=156.57 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=104.6
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
.++||||+|+|+. |..||+||+.++...++.|++|||.++.+ + + ..+..|. .+.+...+.+++.|
T Consensus 2 ~~~ILv~~D~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~---~-~-~~~~~~~---------~~~~~~~~~~~~~l 66 (137)
T 2z08_A 2 FKTILLAYDGSEH-ARRAAEVAKAEAEAHGARLIVVHAYEPVP---D-Y-LGEPFFE---------EALRRRLERAEGVL 66 (137)
T ss_dssp CSEEEEECCSSHH-HHHHHHHHHHHHHHHTCEEEEEEEECC----------------------------CHHHHHHHHHH
T ss_pred cceEEEEeCCCHH-HHHHHHHHHHHHhhcCCEEEEEEEecCCC---c-c-ccccchH---------HHHHHHHHHHHHHH
Confidence 4899999999998 99999999999998899999999987532 1 0 0000010 12222345566777
Q ss_pred HHHHhhhccC-ccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEEe
Q 010658 85 SKYLGFCGKV-KAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (505)
Q Consensus 85 ~~~~~~c~~v-~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV~ 162 (505)
+.+... .++ .+++.+..| +|++.|+++|+++++|+||||++|++++ .+.+.||++.+|++++| |||+||.
T Consensus 67 ~~~~~~-~g~~~~~~~~~~g---~~~~~I~~~a~~~~~dliV~G~~~~~~~--~~~~~Gs~~~~vl~~~~--~pVlvv~ 137 (137)
T 2z08_A 67 EEARAL-TGVPKEDALLLEG---VPAEAILQAARAEKADLIVMGTRGLGAL--GSLFLGSQSQRVVAEAP--CPVLLVR 137 (137)
T ss_dssp HHHHHH-HCCCGGGEEEEES---SHHHHHHHHHHHTTCSEEEEESSCTTCC--SCSSSCHHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHH-cCCCccEEEEEec---CHHHHHHHHHHHcCCCEEEECCCCCchh--hhhhhccHHHHHHhcCC--CCEEEeC
Confidence 776554 467 778877765 8999999999999999999999998877 77789999999999998 9999984
No 9
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=99.79 E-value=1e-18 Score=156.54 Aligned_cols=143 Identities=13% Similarity=-0.000 Sum_probs=99.3
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNL 83 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 83 (505)
.+++||||||+|+. |..||+||+.++...++.|++|||.++.+ . ..+...+..|.. ..+ +.+...+.+++.
T Consensus 5 ~~~~ILv~vD~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~-~-~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~ 75 (150)
T 3tnj_A 5 VYHHILLAVDFSSE-DSQVVQKVRNLASQIGARLSLIHVLDNIP-M-PDTPYGTAIPLD-TET-----TYDAMLDVEKQK 75 (150)
T ss_dssp CCSEEEEECCCSTT-HHHHHHHHHHHHHHHTCEEEEEEEEC----------CTTCCCSS-SCC-----CHHHHHHHHHHH
T ss_pred ccceEEEEeCCCHH-HHHHHHHHHHHHhhcCCEEEEEEEEcCcc-c-cccccccccCcC-HHH-----HHHHHHHHHHHH
Confidence 47999999999999 99999999999999899999999987743 0 000112222221 111 122234555666
Q ss_pred HHHHHhhhccCc-cEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEEe
Q 010658 84 LSKYLGFCGKVK-AEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (505)
Q Consensus 84 L~~~~~~c~~v~-ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV~ 162 (505)
|..+...+ ++. ++..+..| +|++.|+++|+++++|+||||++|++++ . .+.||++.+|++++| |||+||.
T Consensus 76 l~~~~~~~-~~~~~~~~~~~g---~~~~~I~~~a~~~~~dliV~G~~~~~~~--~-~~~Gs~~~~vl~~~~--~pVlvv~ 146 (150)
T 3tnj_A 76 LSQIGNTL-GIDPAHRWLVWG---EPREEIIRIAEQENVDLIVVGSHGRHGL--A-LLLGSTANSVLHYAK--CDVLAVR 146 (150)
T ss_dssp HHHHHHHH-TCCGGGEEEEES---CHHHHHHHHHHHTTCSEEEEEEC-----------CCCHHHHHHHHCS--SEEEEEE
T ss_pred HHHHHHHc-CCCcceEEEecC---CHHHHHHHHHHHcCCCEEEEecCCCCCc--C-eEecchHHHHHHhCC--CCEEEEe
Confidence 66665444 444 46666665 8999999999999999999999998887 7 889999999999999 9999997
Q ss_pred CC
Q 010658 163 GG 164 (505)
Q Consensus 163 kg 164 (505)
..
T Consensus 147 ~~ 148 (150)
T 3tnj_A 147 LR 148 (150)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 10
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=99.78 E-value=5e-19 Score=162.32 Aligned_cols=139 Identities=14% Similarity=0.047 Sum_probs=104.5
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEE--EEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVIL--HVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTD 81 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~Ivll--HV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 81 (505)
..++||||||+|+. |..||+||++++. .++.|++| ||.++.. + +.. ...+. ..+.+...+.++
T Consensus 16 ~~~~ILv~vD~s~~-s~~al~~A~~lA~-~~a~l~ll~a~v~~~~~---~-~~~-~~~~~--------~~~~~~~~~~~~ 80 (163)
T 1tq8_A 16 AYKTVVVGTDGSDS-SMRAVDRAAQIAG-ADAKLIIASAYLPQHED---A-RAA-DILKD--------ESYKVTGTAPIY 80 (163)
T ss_dssp CCCEEEEECCSSHH-HHHHHHHHHHHHT-TTSEEEEEEECCC---------------------------------CCTHH
T ss_pred cCCEEEEEcCCCHH-HHHHHHHHHHHhC-CCCEEEEEEeeeccCcc---c-ccc-ccccc--------HHHHHHHHHHHH
Confidence 46899999999998 9999999999999 99999999 8865532 1 000 00000 112222345567
Q ss_pred HHHHHHHhhhc--cCc-cEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEE
Q 010658 82 NLLSKYLGFCG--KVK-AEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCEL 158 (505)
Q Consensus 82 ~lL~~~~~~c~--~v~-ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V 158 (505)
+.|+.+...+. ++. +++.+..| +|++.|+++|++.++|+||||++|++.+ ++.+.||++.+|++++| |||
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G---~~~~~I~~~a~~~~~DLIV~G~~g~~~~--~~~~lGSva~~vl~~a~--~PV 153 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVG---APVDALVNLADEEKADLLVVGNVGLSTI--AGRLLGSVPANVSRRAK--VDV 153 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECS---SHHHHHHHHHHHTTCSEEEEECCCCCSH--HHHHTBBHHHHHHHHTT--CEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecC---CHHHHHHHHHHhcCCCEEEECCCCCCcc--cceeeccHHHHHHHhCC--CCE
Confidence 78888877776 566 66766665 8999999999999999999999998877 77789999999999998 999
Q ss_pred EEEeCC
Q 010658 159 FIICGG 164 (505)
Q Consensus 159 ~vV~kg 164 (505)
+||...
T Consensus 154 lvV~~~ 159 (163)
T 1tq8_A 154 LIVHTT 159 (163)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999753
No 11
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=99.77 E-value=1.9e-18 Score=157.13 Aligned_cols=130 Identities=14% Similarity=0.085 Sum_probs=104.9
Q ss_pred CCCEEEEEecC-ChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGN-DLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDN 82 (505)
Q Consensus 4 ~~~kIlVAVDg-S~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (505)
.+++||||||+ |+. |..||+||+.++...++.|++|||.++.. + . .+ ...+.+++
T Consensus 23 m~~~ILv~vD~~s~~-s~~al~~A~~la~~~~a~l~llhV~~~~~-------~-----~---~~--------~~~~~~~~ 78 (155)
T 3dlo_A 23 IYMPIVVAVDKKSDR-AERVLRFAAEEARLRGVPVYVVHSLPGGG-------R-----T---KD--------EDIIEAKE 78 (155)
T ss_dssp CCCCEEEECCSSSHH-HHHHHHHHHHHHHHHTCCEEEEEEECCST-------T-----S---CH--------HHHHHHHH
T ss_pred ccCeEEEEECCCCHH-HHHHHHHHHHHHHhcCCEEEEEEEEcCCC-------c-----c---cH--------HHHHHHHH
Confidence 46899999999 998 99999999999998899999999976531 0 0 11 12345666
Q ss_pred HHHHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEE
Q 010658 83 LLSKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFI 160 (505)
Q Consensus 83 lL~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~v 160 (505)
.|+.+...+. ++.+++.+... .++|++.|+++|+++++|+||||++|++.+ .+.+.||++.+|++++| |||+|
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~v~-~G~~~~~I~~~a~~~~~DLIV~G~~g~~~~--~~~~lGSv~~~vl~~a~--~PVLv 153 (155)
T 3dlo_A 79 TLSWAVSIIRKEGAEGEEHLLVR-GKEPPDDIVDFADEVDAIAIVIGIRKRSPT--GKLIFGSVARDVILKAN--KPVIC 153 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEES-SSCHHHHHHHHHHHTTCSEEEEECCEECTT--SCEECCHHHHHHHHHCS--SCEEE
T ss_pred HHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHcCCCEEEECCCCCCCC--CCEEeccHHHHHHHhCC--CCEEE
Confidence 7777777665 55566544332 248999999999999999999999998877 77789999999999999 99999
Q ss_pred Ee
Q 010658 161 IC 162 (505)
Q Consensus 161 V~ 162 (505)
|.
T Consensus 154 Vr 155 (155)
T 3dlo_A 154 IK 155 (155)
T ss_dssp EC
T ss_pred eC
Confidence 84
No 12
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=99.75 E-value=5.8e-18 Score=150.16 Aligned_cols=136 Identities=10% Similarity=0.068 Sum_probs=97.0
Q ss_pred CEEEEEecCChHh-HHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 6 PKVYVAVGNDLQD-GYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 6 ~kIlVAVDgS~~~-S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
++||||||+|+.. |..|++||+.++...++.|++|||.++.+ ..+......+. . .....+..++.+
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~---~~~~~~~~~~~-~---------~~~~~~~~~~~~ 68 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLP---YYASLGMAYTA-E---------LPGMDELREGSE 68 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHHHHHHHTCEEEEEEEECC-----------------------------CHHHHHHHHH
T ss_pred CEEEEEecCChHhhHHHHHHHHHHHHHhcCCeEEEEEEecCCc---ccccccccccc-h---------hhhHHHHHHHHH
Confidence 7999999999831 78899999999998899999999987743 11111111110 0 001122233444
Q ss_pred HHHHhhhc-----cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEE
Q 010658 85 SKYLGFCG-----KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELF 159 (505)
Q Consensus 85 ~~~~~~c~-----~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~ 159 (505)
..+..++. ++.+++.+..| +|++.|+++|+++++|+||||+++ +++ .+.+.||++.+|++++| |||+
T Consensus 69 ~~l~~~~~~~~~~~~~v~~~~~~g---~~~~~I~~~a~~~~~dliV~G~~~-~~~--~~~~~Gs~~~~v~~~~~--~pVl 140 (143)
T 3fdx_A 69 TQLKEIAKKFSIPEDRMHFHVAEG---SPKDKILALAKSLPADLVIIASHR-PDI--TTYLLGSNAAAVVRHAE--CSVL 140 (143)
T ss_dssp HHHHHHHTTSCCCGGGEEEEEEES---CHHHHHHHHHHHTTCSEEEEESSC-TTC--CSCSSCHHHHHHHHHCS--SEEE
T ss_pred HHHHHHHHHcCCCCCceEEEEEec---ChHHHHHHHHHHhCCCEEEEeCCC-CCC--eeeeeccHHHHHHHhCC--CCEE
Confidence 44555554 23456777765 899999999999999999999995 666 77889999999999999 9999
Q ss_pred EEe
Q 010658 160 IIC 162 (505)
Q Consensus 160 vV~ 162 (505)
+|.
T Consensus 141 vv~ 143 (143)
T 3fdx_A 141 VVR 143 (143)
T ss_dssp EEC
T ss_pred EeC
Confidence 984
No 13
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=99.72 E-value=1.8e-17 Score=146.73 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=99.7
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
+++||||+|+|+. |..||+||+.++...++.|++|||.++.+ ...+ + .+ ......+.+...+.+++.|
T Consensus 2 ~~~ILv~~D~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~--~~~~---~-~~-----~~~~~~~~~~~~~~~~~~l 69 (141)
T 1jmv_A 2 YKHILVAVDLSEE-SPILLKKAVGIAKRHDAKLSIIHVDVNFS--DLYT---G-LI-----DVNMSSMQDRISTETQKAL 69 (141)
T ss_dssp CSEEEEEECCSTT-HHHHHHHHHHHHHHHTCEEEEEEEEECCG--GGCC---C-CE-----EHHHHHHTTCCCCHHHHHH
T ss_pred CceEEEEecCchh-hHHHHHHHHHHHHhcCCEEEEEEEecCch--hhhc---c-cc-----ccchHHHHHHHHHHHHHHH
Confidence 5899999999998 99999999999998899999999985421 0111 1 00 0011112222234455666
Q ss_pred HHHHhhhccCcc-EEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEEeC
Q 010658 85 SKYLGFCGKVKA-EILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICG 163 (505)
Q Consensus 85 ~~~~~~c~~v~v-e~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV~k 163 (505)
+.+.... ++.+ +..+..| +|++.|+++|+++++|+||||++ ++.+ .+ .||++.+|++++| |||+||..
T Consensus 70 ~~~~~~~-~~~~~~~~~~~g---~~~~~I~~~a~~~~~dliV~G~~-~~~~--~~--lgs~~~~vl~~~~--~pVlvv~~ 138 (141)
T 1jmv_A 70 LDLAESV-DYPISEKLSGSG---DLGQVLSDAIEQYDVDLLVTGHH-QDFW--SK--LMSSTRQVMNTIK--IDMLVVPL 138 (141)
T ss_dssp HHHHHHS-SSCCCCEEEEEE---CHHHHHHHHHHHTTCCEEEEEEC-CCCH--HH--HHHHHHHHHTTCC--SEEEEEEC
T ss_pred HHHHHHc-CCCceEEEEecC---CHHHHHHHHHHhcCCCEEEEeCC-Cchh--hh--hcchHHHHHhcCC--CCEEEeeC
Confidence 6654433 4554 4555555 89999999999999999999999 7766 44 3899999999998 99999975
Q ss_pred C
Q 010658 164 G 164 (505)
Q Consensus 164 g 164 (505)
+
T Consensus 139 ~ 139 (141)
T 1jmv_A 139 R 139 (141)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=99.67 E-value=1.3e-16 Score=140.86 Aligned_cols=129 Identities=12% Similarity=-0.013 Sum_probs=97.0
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe-eC-CCCCccccc-CCCCCCCCcCChHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT-YN-ISIKDFVYT-PFGKLPATSLSDEKLEILKKYEQGKT 80 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~-~~-~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~ 80 (505)
..++||||+|+|+. |..||.||+.++...++.|++|||. ++ +. .+. .....|.. .+ +.+...+.+
T Consensus 3 ~~~~ILv~~D~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~~~----~~~~~~~~~~~~---~~----~~~~~~~~~ 70 (138)
T 1q77_A 3 AMKVLLVLTDAYSD-CEKAITYAVNFSEKLGAELDILAVLEDVYNL----ERANVTFGLPFP---PE----IKEESKKRI 70 (138)
T ss_dssp CCEEEEEEESTTCC-CHHHHHHHHHHHTTTCCEEEEEEECHHHHHH----HHHHHHHCCCCC---TH----HHHHHHHHH
T ss_pred cccEEEEEccCCHh-HHHHHHHHHHHHHHcCCeEEEEEEecccccc----cccccccCCCCC---hH----HHHHHHHHH
Confidence 36899999999998 9999999999999889999999997 53 10 110 00012211 11 223344556
Q ss_pred HHHHHHHHhhh--c--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCce
Q 010658 81 DNLLSKYLGFC--G--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYC 156 (505)
Q Consensus 81 ~~lL~~~~~~c--~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C 156 (505)
++.|+.+ ..| . + .+++.+..| +|++.|+++|+++++|+||||++|+ |++.+|++++| |
T Consensus 71 ~~~l~~~-~~~~~~~~~-~~~~~~~~g---~~~~~I~~~a~~~~~dliV~G~~g~-----------sv~~~vl~~a~--~ 132 (138)
T 1q77_A 71 ERRLREV-WEKLTGSTE-IPGVEYRIG---PLSEEVKKFVEGKGYELVVWACYPS-----------AYLCKVIDGLN--L 132 (138)
T ss_dssp HHHHHHH-HHHHHSCCC-CCCEEEECS---CHHHHHHHHHTTSCCSEEEECSCCG-----------GGTHHHHHHSS--S
T ss_pred HHHHHHH-HHHhhccCC-cceEEEEcC---CHHHHHHHHHHhcCCCEEEEeCCCC-----------chHHHHHHhCC--C
Confidence 6777777 653 3 5 677776654 8999999999999999999999974 78899999999 9
Q ss_pred EEEEEe
Q 010658 157 ELFIIC 162 (505)
Q Consensus 157 ~V~vV~ 162 (505)
||++|.
T Consensus 133 PVlvv~ 138 (138)
T 1q77_A 133 ASLIVK 138 (138)
T ss_dssp EEEECC
T ss_pred ceEeeC
Confidence 999983
No 15
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=99.66 E-value=2.4e-16 Score=154.68 Aligned_cols=144 Identities=17% Similarity=0.038 Sum_probs=108.7
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChH--HH-HHHHHHHHHHHHH
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDE--KL-EILKKYEQGKTDN 82 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~--~~-~~~~~~~~~~~~~ 82 (505)
++||||+|+|+. |..|++||+.++...++.|++|||.++.. . ..+...+ .+. ..++ .+ ..+.+...+.+++
T Consensus 1 k~ILv~vD~s~~-s~~al~~A~~lA~~~~a~l~ll~v~~~~~-~-~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 74 (268)
T 3ab8_A 1 MRILLATDGSPQ-ARGAEALAEWLAYKLSAPLTVLFVVDTRL-A-RIPELLD-FGA--LTVPVPVLRTELERALALRGEA 74 (268)
T ss_dssp CCEEEECCSCGG-GHHHHHHHHHHHHHHTCCEEEEEEEEHHH-H-THHHHC----------CHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCHH-HHHHHHHHHHHHHHhCCcEEEEEEeccCC-c-ccccccC-chH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999 99999999999998899999999987532 0 0111111 110 0010 01 1113344566788
Q ss_pred HHHHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCC-CCCCcccccccccchhcccCCCceEEE
Q 010658 83 LLSKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMI-PSAGKSRTAVSGSYFVHHHMPDYCELF 159 (505)
Q Consensus 83 lL~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~-~~~~kr~~~gsvs~~V~k~Ap~~C~V~ 159 (505)
.|+.+...+. ++.+++.+..| +|++.|+++ ++++|+||||++|++ ++ ++.+.||++.+|++++| |||+
T Consensus 75 ~l~~~~~~~~~~g~~~~~~~~~g---~~~~~I~~~--~~~~dliV~G~~g~~~~~--~~~~~Gs~~~~v~~~a~--~PVl 145 (268)
T 3ab8_A 75 VLERVRQSALAAGVAVEAVLEEG---VPHEAILRR--ARAADLLVLGRSGEAHGD--GFGGLGSTADRVLRASP--VPVL 145 (268)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEE---CHHHHHHHH--HTTCSEEEEESSCTTSCT--TCCSCCHHHHHHHHHCS--SCEE
T ss_pred HHHHHHHHHHhCCCCeEEEEecC---CHHHHHHhh--ccCCCEEEEeccCCCccc--cccccchhHHHHHHhCC--CCEE
Confidence 8888888876 67777777776 899999999 999999999999988 77 77789999999999998 9999
Q ss_pred EEeCC
Q 010658 160 IICGG 164 (505)
Q Consensus 160 vV~kg 164 (505)
+|..+
T Consensus 146 vv~~~ 150 (268)
T 3ab8_A 146 LAPGE 150 (268)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 99754
No 16
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=99.66 E-value=5.1e-16 Score=156.02 Aligned_cols=144 Identities=10% Similarity=0.073 Sum_probs=112.5
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNL 83 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 83 (505)
..++||||+|+|+. |..||.||+..+...++.|++|||.++.+ + ...+. +.......+.+...+.+++.
T Consensus 6 ~~k~ILv~~D~s~~-s~~al~~A~~lA~~~~a~l~ll~v~~~~~---~--~~~~~-----~~~~~~~~~~~~~~~~~~~~ 74 (319)
T 3olq_A 6 KYQNLLVVIDPNQD-DQPALRRAVYIVQRNGGRIKAFLPVYDLS---Y--DMTTL-----LSPDERNAMRKGVINQKTAW 74 (319)
T ss_dssp CSCEEEEECCTTCS-CCHHHHHHHHHHHHHCCEEEEEEEECCGG---G--GCTTT-----SCHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEECCCcc-cHHHHHHHHHHHHHcCCeEEEEEEecccc---h--hhccc-----cChhhHHHHHHHHHHHHHHH
Confidence 36899999999998 99999999999999999999999976532 1 11111 11222334444455666777
Q ss_pred HHHHHhhhc--cCccEEEEE-ecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEE
Q 010658 84 LSKYLGFCG--KVKAEILKV-EKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFI 160 (505)
Q Consensus 84 L~~~~~~c~--~v~ve~~vv-e~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~v 160 (505)
|..+...+. ++.+++.+. .| +|.+.|++++.++++|+||||++|.+.+ .+.+.||++..|+++++ |||+|
T Consensus 75 l~~~~~~~~~~~v~~~~~~~~~g---~~~~~i~~~a~~~~~DLiV~G~~g~~~~--~~~~~Gs~~~~vl~~~~--~PVlv 147 (319)
T 3olq_A 75 IKQQARYYLEAGIQIDIKVIWHN---RPYEAIIEEVITDKHDLLIKMAHQHDKL--GSLIFTPLDWQLLRKCP--APVWM 147 (319)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECS---CHHHHHHHHHHHHTCSEEEEEEBCC--C--CSCBCCHHHHHHHHHCS--SCEEE
T ss_pred HHHHHHHHhhcCCeEEEEEEecC---ChHHHHHHHHHhcCCCEEEEecCcCchh--hcccccccHHHHHhcCC--CCEEE
Confidence 887777764 777887777 44 8999999999999999999999998877 77889999999999998 99999
Q ss_pred EeCCe
Q 010658 161 ICGGK 165 (505)
Q Consensus 161 V~kgk 165 (505)
|..+.
T Consensus 148 v~~~~ 152 (319)
T 3olq_A 148 VKDKE 152 (319)
T ss_dssp EESSC
T ss_pred ecCcc
Confidence 98653
No 17
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=99.63 E-value=2e-15 Score=151.63 Aligned_cols=140 Identities=14% Similarity=0.127 Sum_probs=106.2
Q ss_pred CCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHH
Q 010658 3 TEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDN 82 (505)
Q Consensus 3 ~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (505)
...++||||||+|+. |..|++||+.++...++.|++|||.++.. .+.+.+. +..+ +.+...+.+++
T Consensus 17 ~~~~~ILv~~D~s~~-s~~al~~A~~lA~~~~a~l~ll~v~~~~~----~~~~~~~-----~~~~----~~~~~~~~~~~ 82 (309)
T 3cis_A 17 NSSLGIIVGIDDSPA-AQVAVRWAARDAELRKIPLTLVHAVSPEV----ATWLEVP-----LPPG----VLRWQQDHGRH 82 (309)
T ss_dssp -CTTEEEEECCSSHH-HHHHHHHHHHHHHHHTCCEEEEEECCCCC----CCTTCCC-----CCHH----HHHHHHHHHHH
T ss_pred CCCCeEEEEECCCHH-HHHHHHHHHHHHHhcCCcEEEEEEecCcc----cccccCC-----CCch----hhHHHHHHHHH
Confidence 346899999999998 99999999999998899999999987531 1111111 1111 22223445566
Q ss_pred HHHHHHhhhc-------cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCc
Q 010658 83 LLSKYLGFCG-------KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDY 155 (505)
Q Consensus 83 lL~~~~~~c~-------~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~ 155 (505)
.|+.+...+. ++.+++.+..| +|.+.|+++++ ++|+||||++|++.+ .+.+.||++.+|++++|
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~I~~~a~--~~DliV~G~~g~~~~--~~~~~Gs~~~~vl~~~~-- 153 (309)
T 3cis_A 83 LIDDALKVVEQASLRAGPPTVHSEIVPA---AAVPTLVDMSK--DAVLMVVGCLGSGRW--PGRLLGSVSSGLLRHAH-- 153 (309)
T ss_dssp HHHHHHHHHHHHCSSSCCSCEEEEEESS---CHHHHHHHHGG--GEEEEEEESSCTTCC--TTCCSCHHHHHHHHHCS--
T ss_pred HHHHHHHHHHHhcccCCCceEEEEEecC---CHHHHHHHHhc--CCCEEEECCCCCccc--cccccCcHHHHHHHhCC--
Confidence 6666665553 56667766654 89999999997 899999999998877 77889999999999998
Q ss_pred eEEEEEeCCe
Q 010658 156 CELFIICGGK 165 (505)
Q Consensus 156 C~V~vV~kgk 165 (505)
|||+||..+.
T Consensus 154 ~PVlvv~~~~ 163 (309)
T 3cis_A 154 CPVVIIHDED 163 (309)
T ss_dssp SCEEEECTTC
T ss_pred CCEEEEcCCc
Confidence 9999998653
No 18
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=99.63 E-value=3e-16 Score=156.35 Aligned_cols=142 Identities=15% Similarity=0.031 Sum_probs=110.2
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHH
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKT 80 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 80 (505)
|-+..++||||||+|+. |..|++||+..+...++.|++|||.++.. .+.... . .... .+.+...+.+
T Consensus 18 ~m~m~~~ILv~vD~s~~-s~~al~~A~~lA~~~~a~l~ll~v~~~~~----~~~~~~---~-~~~~----~~~~~~~~~~ 84 (294)
T 3loq_A 18 LYFQSNAMLLPTDLSEN-SFKVLEYLGDFKKVGVEEIGVLFVINLTK----LSTVSG---G-IDID----HYIDEMSEKA 84 (294)
T ss_dssp CSSTTCEEEEECCSCTG-GGGGGGGHHHHHHTTCCEEEEECCEECTT----C--------C-CCTT----HHHHHHHHHH
T ss_pred HHHhhccEEEecCCCHH-HHHHHHHHHHHHhhcCCEEEEEEEecCcc----cccccc---c-ccHH----HHHHHHHHHH
Confidence 34457999999999998 99999999999999999999999987743 111110 0 1111 2334455677
Q ss_pred HHHHHHHHhhhc--cCccEE-EEE-ecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCce
Q 010658 81 DNLLSKYLGFCG--KVKAEI-LKV-EKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYC 156 (505)
Q Consensus 81 ~~lL~~~~~~c~--~v~ve~-~vv-e~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C 156 (505)
++.|+.+...+. ++.+++ .+. .| +|.+.| ++.+.++|+||||++|.+.+ .+.+.||++.+|++++| |
T Consensus 85 ~~~l~~~~~~~~~~g~~~~~~~v~~~g---~~~~~I--~a~~~~~DliV~G~~g~~~~--~~~~~Gs~~~~vl~~~~--~ 155 (294)
T 3loq_A 85 EEVLPEVAQKIEAAGIKAEVIKPFPAG---DPVVEI--IKASENYSFIAMGSRGASKF--KKILLGSVSEGVLHDSK--V 155 (294)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSSCCEE---CHHHHH--HHHHTTSSEEEEECCCCCHH--HHHHHCCHHHHHHHHCS--S
T ss_pred HHHHHHHHHHHHHcCCCcceeEeeccC---ChhHhe--eeccCCCCEEEEcCCCCccc--cceeeccHHHHHHhcCC--C
Confidence 788888888876 555555 445 44 899999 99999999999999998876 66778999999999999 9
Q ss_pred EEEEEeCC
Q 010658 157 ELFIICGG 164 (505)
Q Consensus 157 ~V~vV~kg 164 (505)
||+||..+
T Consensus 156 PVlvv~~~ 163 (294)
T 3loq_A 156 PVYIFKHD 163 (294)
T ss_dssp CEEEECCC
T ss_pred CEEEecCc
Confidence 99999854
No 19
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=99.63 E-value=2.7e-15 Score=149.25 Aligned_cols=137 Identities=10% Similarity=0.049 Sum_probs=102.6
Q ss_pred CCCEEEEEecCChHh------HHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQD------GYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQ 77 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~------S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~ 77 (505)
..++|+||+|+|+.+ |..|++||+..+...++.|++|||.++.. .. . ..|. . .+.+...
T Consensus 133 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~----~~-~--~~~~----~----~~~~~~~ 197 (290)
T 3mt0_A 133 TGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPM----LS-S--ADPT----F----QLSETIE 197 (290)
T ss_dssp TTCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEC----------------C----H----HHHHHHH
T ss_pred CCCeEEEEECCCCcchhhhHHHHHHHHHHHHHHHHcCCeEEEEEEecCcc----cc-c--cCch----h----HHHHHHH
Confidence 368999999999853 78999999999999999999999987642 11 0 0111 0 1223334
Q ss_pred HHHHHHHHHHHhhhccCc-cEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCce
Q 010658 78 GKTDNLLSKYLGFCGKVK-AEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYC 156 (505)
Q Consensus 78 ~~~~~lL~~~~~~c~~v~-ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C 156 (505)
+...+.|..+.... ++. +.+.+..| +|++.|+++|+++++|+||||++|++++ .+.+.||++.+|++++| |
T Consensus 198 ~~~~~~l~~~~~~~-g~~~~~~~v~~g---~~~~~I~~~a~~~~~dLiVmG~~g~~~~--~~~~~Gsv~~~vl~~~~--~ 269 (290)
T 3mt0_A 198 ARYREACRTFQAEY-GFSDEQLHIEEG---PADVLIPRTAQKLDAVVTVIGTVARTGL--SGALIGNTAEVVLDTLE--S 269 (290)
T ss_dssp HHHHHHHHHHHHHH-TCCTTTEEEEES---CHHHHHHHHHHHHTCSEEEEECCSSCCG--GGCCSCHHHHHHHTTCS--S
T ss_pred HHHHHHHHHHHHHc-CCCcceEEEecc---CHHHHHHHHHHhcCCCEEEECCCCCcCC--cceecchHHHHHHhcCC--C
Confidence 44555555554433 443 45666665 8999999999999999999999999888 78889999999999999 9
Q ss_pred EEEEEeC
Q 010658 157 ELFIICG 163 (505)
Q Consensus 157 ~V~vV~k 163 (505)
||++|..
T Consensus 270 pVLvv~~ 276 (290)
T 3mt0_A 270 DVLVLKP 276 (290)
T ss_dssp EEEEECC
T ss_pred CEEEECC
Confidence 9999973
No 20
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=99.60 E-value=5.1e-15 Score=148.74 Aligned_cols=143 Identities=11% Similarity=0.034 Sum_probs=108.5
Q ss_pred CCEEEEEecCCh-------HhHHHHHHHHHHhhhcC--CCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHH
Q 010658 5 EPKVYVAVGNDL-------QDGYRTLDWTIRKWKAQ--SISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKY 75 (505)
Q Consensus 5 ~~kIlVAVDgS~-------~~S~~AL~WAl~~~~~~--g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 75 (505)
.++|+||+|+|+ . |.+||.||+..+... ++.|++|||.++.. .. .....|.. . ...+.+.
T Consensus 156 ~~~Ilva~D~s~~~~~~~~~-s~~al~~a~~la~~~~~~a~l~ll~v~~~~~----~~-~~~~~~~~--~---~~~~~~~ 224 (319)
T 3olq_A 156 YGTIVVAANLSNEESYHDAL-NLKLIELTNDLSHRIQKDPDVHLLSAYPVAP----IN-IAIELPDF--D---PNLYNNA 224 (319)
T ss_dssp TCEEEEECCCSCCSTHHHHH-HHHHHHHHHHHHHHHCSSCCEEEEEEECCCS----CS-CCTTCTTC--C---HHHHHHH
T ss_pred CCeEEEEECCCCcchhHHHH-HHHHHHHHHHHHHhccCCCeEEEEEeecCcc----hh-hhccCCcc--c---HHHHHHH
Confidence 689999999999 5 799999999999887 89999999987643 11 11111211 1 1234444
Q ss_pred HHHHHHHHHHHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCc
Q 010658 76 EQGKTDNLLSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDY 155 (505)
Q Consensus 76 ~~~~~~~lL~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~ 155 (505)
..+...+.|..+...+.-..+...+..| +|+++|+++|+++++|+||||++|++++ .+.+.||++.+|+++++
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~v~~g---~~~~~I~~~a~~~~~dLiV~G~~g~~~~--~~~~~Gsv~~~vl~~~~-- 297 (319)
T 3olq_A 225 LRGQHLIAMKELRQKFSIPEEKTHVKEG---LPEQVIPQVCEELNAGIVVLGILGRTGL--SAAFLGNTAEQLIDHIK-- 297 (319)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEES---CHHHHHHHHHHHTTEEEEEEECCSCCST--HHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEecC---CcHHHHHHHHHHhCCCEEEEeccCccCC--ccccccHHHHHHHhhCC--
Confidence 5556666776665544322345666665 8999999999999999999999999888 77889999999999998
Q ss_pred eEEEEEeCCe
Q 010658 156 CELFIICGGK 165 (505)
Q Consensus 156 C~V~vV~kgk 165 (505)
|||++|....
T Consensus 298 ~pVLvv~~~~ 307 (319)
T 3olq_A 298 CDLLAIKPDG 307 (319)
T ss_dssp SEEEEECCTT
T ss_pred CCEEEECCCC
Confidence 9999997543
No 21
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=99.59 E-value=6.7e-15 Score=147.75 Aligned_cols=136 Identities=10% Similarity=0.035 Sum_probs=101.9
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
.++|+||+|+|+. |..||+||+..+...++.|++|||.++.. +. ..+. ... ..+.+..++...+++
T Consensus 171 ~~~Ilv~~D~s~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~---~~-----~~~~--~~~---~~~~~~~~~~l~~~~ 236 (309)
T 3cis_A 171 QAPVLVGVDGSSA-SELATAIAFDEASRRNVDLVALHAWSDVD---VS-----EWPG--IDW---PATQSMAEQVLAERL 236 (309)
T ss_dssp CCCEEEECCSSHH-HHHHHHHHHHHHHHTTCCEEEEEESCSSC---CT-----TCSS--CCH---HHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCChH-HHHHHHHHHHHHHhcCCEEEEEEEeeccc---cc-----CCCc--ccH---HHHHHHHHHHHHHHH
Confidence 5789999999998 99999999999998899999999976532 11 0111 111 122222233333444
Q ss_pred HHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEEeC
Q 010658 85 SKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICG 163 (505)
Q Consensus 85 ~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV~k 163 (505)
..+...+.++.+++.+..| +|+++|+++++ ++|+||||+++++.+ .+.+.||++.+|++++| |||+||..
T Consensus 237 ~~~~~~~~~~~~~~~~~~g---~~~~~I~~~a~--~adliV~G~~~~~~~--~~~l~Gsv~~~vl~~~~--~pVlvv~~ 306 (309)
T 3cis_A 237 AGWQERYPNVAITRVVVRD---QPARQLVQRSE--EAQLVVVGSRGRGGY--AGMLVGSVGETVAQLAR--TPVIVARE 306 (309)
T ss_dssp TTHHHHCTTSCEEEEEESS---CHHHHHHHHHT--TCSEEEEESSCSSCC--TTCSSCHHHHHHHHHCS--SCEEEECC
T ss_pred HHHHhhCCCCcEEEEEEcC---CHHHHHHHhhC--CCCEEEECCCCCCCc--cccccCcHHHHHHhcCC--CCEEEeCC
Confidence 4443333467777776654 89999999997 999999999999887 77889999999999998 99999964
No 22
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=99.56 E-value=8.4e-15 Score=145.72 Aligned_cols=123 Identities=10% Similarity=0.018 Sum_probs=99.4
Q ss_pred CCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHH
Q 010658 3 TEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDN 82 (505)
Q Consensus 3 ~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (505)
...++||||+|+|+. |..||.||+..+...++.|++|||.+|. . .++
T Consensus 5 ~~~~~ILv~~D~s~~-s~~al~~A~~la~~~~a~l~ll~v~~~~----------------~----------------~~~ 51 (290)
T 3mt0_A 5 QAIRSILVVIEPDQL-EGLALKRAQLIAGVTQSHLHLLVCEKRR----------------D----------------HSA 51 (290)
T ss_dssp TTCCEEEEECCSSCS-CCHHHHHHHHHHHHHCCEEEEEEECSSS----------------C----------------CHH
T ss_pred hhhceEEEEeCCCcc-chHHHHHHHHHHHhcCCeEEEEEeeCcH----------------H----------------HHH
Confidence 347999999999998 9999999999999999999999995421 0 111
Q ss_pred HHHHHHhhh--ccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEE
Q 010658 83 LLSKYLGFC--GKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFI 160 (505)
Q Consensus 83 lL~~~~~~c--~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~v 160 (505)
.|+.+...+ .++.+++.+..+ ++|.+.|+++|++.++|+||||++|.+.+ .+.+.||++..|++++| |||++
T Consensus 52 ~l~~~~~~~~~~~~~~~~~~~~~--g~~~~~i~~~a~~~~~dliV~G~~~~~~~--~~~~~gs~~~~vl~~~~--~PVlv 125 (290)
T 3mt0_A 52 ALNDLAQELREEGYSVSTNQAWK--DSLHQTIIAEQQAEGCGLIIKQHFPDNPL--KKAILTPDDWKLLRFAP--CPVLM 125 (290)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECS--SSHHHHHHHHHHHHTCSEEEEECCCSCTT--STTSCCHHHHHHHHHCS--SCEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEEeC--CCHHHHHHHHHHhcCCCEEEEecccCCch--hhcccCHHHHHHHhcCC--CCEEE
Confidence 222222222 267777777643 48999999999999999999999998877 77889999999999998 99999
Q ss_pred EeCC
Q 010658 161 ICGG 164 (505)
Q Consensus 161 V~kg 164 (505)
|..+
T Consensus 126 v~~~ 129 (290)
T 3mt0_A 126 TKTA 129 (290)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 9843
No 23
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.1e-14 Score=142.91 Aligned_cols=121 Identities=20% Similarity=0.119 Sum_probs=98.1
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHH
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNL 83 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 83 (505)
..++|+||+|+|+. +..||.||+..+...++.|++|||.++.. .+ +.
T Consensus 169 ~~~~Ilv~~d~s~~-s~~al~~a~~la~~~~~~l~ll~v~~~~~-----------------~~---------------~~ 215 (294)
T 3loq_A 169 LFDRVLVAYDFSKW-ADRALEYAKFVVKKTGGELHIIHVSEDGD-----------------KT---------------AD 215 (294)
T ss_dssp TTSEEEEECCSSHH-HHHHHHHHHHHHHHHTCEEEEEEECSSSC-----------------CH---------------HH
T ss_pred cCCEEEEEECCCHH-HHHHHHHHHHHhhhcCCEEEEEEEccCch-----------------HH---------------HH
Confidence 45899999999998 99999999999988899999999965420 01 12
Q ss_pred HHHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEE
Q 010658 84 LSKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFII 161 (505)
Q Consensus 84 L~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV 161 (505)
++.+...+. ++.+++.+..| +|+++|+++++++++|+||||+++++.+ ++.+.||++.+|++++| |||++|
T Consensus 216 l~~~~~~l~~~~~~~~~~~~~g---~~~~~I~~~a~~~~~dLlV~G~~~~~~~--~~~~~Gs~~~~vl~~~~--~pvLvv 288 (294)
T 3loq_A 216 LRVMEEVIGAEGIEVHVHIESG---TPHKAILAKREEINATTIFMGSRGAGSV--MTMILGSTSESVIRRSP--VPVFVC 288 (294)
T ss_dssp HHHHHHHHHHTTCCEEEEEECS---CHHHHHHHHHHHTTCSEEEEECCCCSCH--HHHHHHCHHHHHHHHCS--SCEEEE
T ss_pred HHHHHHHHHHcCCcEEEEEecC---CHHHHHHHHHHhcCcCEEEEeCCCCCCc--cceeeCcHHHHHHhcCC--CCEEEE
Confidence 222222222 56666666654 8999999999999999999999998877 77788999999999999 999999
Q ss_pred eCC
Q 010658 162 CGG 164 (505)
Q Consensus 162 ~kg 164 (505)
..+
T Consensus 289 ~~~ 291 (294)
T 3loq_A 289 KRG 291 (294)
T ss_dssp CSC
T ss_pred CCC
Confidence 864
No 24
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=99.39 E-value=9.3e-13 Score=128.98 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=88.6
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
.++|+||+|+|+. |..|+.||...+...++.|++|||.++. + ..++.+
T Consensus 154 ~~~ilv~~d~s~~-~~~al~~a~~la~~~~a~l~ll~v~~~~--------------------~-----------~~~~~l 201 (268)
T 3ab8_A 154 LEGALLGYDASES-AVRALHALAPLARALGLGVRVVSVHEDP--------------------A-----------RAEAWA 201 (268)
T ss_dssp CCEEEEECCSCHH-HHHHHHHHHHHHHHHTCCEEEEEECSSH--------------------H-----------HHHHHH
T ss_pred CCEEEEEECCCHH-HHHHHHHHHHhhhcCCCEEEEEEEcCcH--------------------H-----------HHHHHH
Confidence 5799999999998 9999999999988888899999995431 0 111223
Q ss_pred HHHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEEe
Q 010658 85 SKYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (505)
Q Consensus 85 ~~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV~ 162 (505)
+.+...+. ++.+++.+..| +|+++|+++++++ |+||||+ ++ .+.+.||++.+|++++| |||++|.
T Consensus 202 ~~~~~~l~~~~~~~~~~~~~g---~~~~~i~~~a~~~--dliV~G~----~~--~~~~~Gs~~~~vl~~~~--~pvlvv~ 268 (268)
T 3ab8_A 202 LEAEAYLRDHGVEASALVLGG---DAADHLLRLQGPG--DLLALGA----PV--RRLVFGSTAERVIRNAQ--GPVLTAR 268 (268)
T ss_dssp HHHHHHHHHTTCCEEEEEECS---CHHHHHHHHCCTT--EEEEEEC----CC--SCCSSCCHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHHHHHcCCceEEEEeCC---ChHHHHHHHHHhC--CEEEECC----cc--cccEeccHHHHHHhcCC--CCEEEeC
Confidence 33333333 56677666654 8999999999999 9999999 33 56678999999999998 9999984
No 25
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=97.08 E-value=0.00037 Score=68.35 Aligned_cols=49 Identities=29% Similarity=0.569 Sum_probs=44.2
Q ss_pred cccccccHHHHHHHhhccccc------cccccCCCcceEEEEEECCcEEEEEEccC
Q 010658 446 CAFREYAAEDIRLATEDFSER------FRLKCAGDWTNVYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 446 ~~~~~~s~~el~~AT~~Fs~~------~~iG~gg~~G~VYkg~L~g~~VAVK~L~~ 495 (505)
..+..|++.++..+|++|+.. ..||.|+ ||.||+|..+|..||||++..
T Consensus 10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~-~g~Vy~~~~~~~~vavK~~~~ 64 (307)
T 2nru_A 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGG-FGVVYKGYVNNTTVAVKKLAA 64 (307)
T ss_dssp -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECS-SEEEEEEESSSCEEEEEEECC
T ss_pred CCCCcccHHHHHHHHcccccccccccCCccccCC-CeEEEEEEECCceEEEEEEec
Confidence 356789999999999999988 8899999 999999999999999999863
No 26
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=96.48 E-value=0.00069 Score=67.92 Aligned_cols=43 Identities=35% Similarity=0.505 Sum_probs=30.5
Q ss_pred HhhccccccccccCCCcceEEEEEEC-------CcEEEEEEccCC---CChhhhhc
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNG---LSEEDFQA 504 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~-------g~~VAVK~L~~~---~~~~eF~~ 504 (505)
++-.|.+ .||+|+ ||.||+|.+. +..||||+|... ...++|..
T Consensus 26 ~~~~~~~--~lG~G~-fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~ 78 (308)
T 4gt4_A 26 SAVRFME--ELGEDR-FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78 (308)
T ss_dssp GGEEEEE--EEEECS-SCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHH
T ss_pred HHCeEee--EeccCC-CcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHH
Confidence 3334544 799999 9999999973 468999999742 23456654
No 27
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=95.97 E-value=0.0032 Score=62.14 Aligned_cols=49 Identities=29% Similarity=0.615 Sum_probs=44.0
Q ss_pred cccccccHHHHHHHhhccccccccccCCCcceEEEEEE-CCcEEEEEEccC
Q 010658 446 CAFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLNN 495 (505)
Q Consensus 446 ~~~~~~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~~ 495 (505)
.....|++.++..++++|.....||.|+ ||.||+|.. +|..||||++..
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~~ 64 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGG-FGKVYKGRLADGTLVAVKRLKE 64 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCS-SSEEEEECCSSSCCEEEEECCC
T ss_pred CccceecHHHHHHHhhccccceeEecCC-CcEEEEEEecCCCEEEEEEecc
Confidence 3456799999999999999999999999 999999988 589999999974
No 28
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=95.62 E-value=0.0058 Score=61.72 Aligned_cols=43 Identities=23% Similarity=0.402 Sum_probs=31.6
Q ss_pred hccccccccccCCCcceEEEEEEC-------CcEEEEEEccCCC--Chhhhhc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGL--SEEDFQA 504 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~-------g~~VAVK~L~~~~--~~~eF~~ 504 (505)
.+|.-...||+|+ ||.||+|.+. |..||||++.... ..++|..
T Consensus 41 ~d~~l~~~LG~G~-fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~ 92 (329)
T 4aoj_A 41 RDIVLKWELGEGA-FGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR 92 (329)
T ss_dssp GGEEEEEEEEECS-SEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHH
T ss_pred HHeEEEEEEccCC-CcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHH
Confidence 3455567899999 9999999863 5789999997422 3455654
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=95.56 E-value=0.0095 Score=59.12 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=38.2
Q ss_pred ccccHHHHHHHhhc----------cccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 449 REYAAEDIRLATED----------FSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 449 ~~~s~~el~~AT~~----------Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..|++.++..+|+. |.....||.|+ ||.||+|.. +|..||||++..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~-~g~V~~a~~~~~g~~vavK~~~~ 80 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGS-TGIVCLAREKHSGRQVAVKMMDL 80 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEET
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCC-CeEEEEEEECCCCcEEEEEEEec
Confidence 45899999999975 56667899999 999999998 489999999863
No 30
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=95.35 E-value=0.78 Score=58.77 Aligned_cols=28 Identities=4% Similarity=0.203 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhHHHH
Q 010658 284 ERTEFMKSKINEAREMIRLKKKETKDDA 311 (505)
Q Consensus 284 e~~~~l~~~l~ea~~~~~~~r~~~~~~~ 311 (505)
+.++.|+.+|.+-......+.++|.+..
T Consensus 1934 ~~V~~l~~~L~~~~~~L~~k~~ea~~~l 1961 (3245)
T 3vkg_A 1934 AQVKDLQVSLAQKNRELDVKNEQANQKL 1961 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777777766666666666544
No 31
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=95.27 E-value=0.0036 Score=61.82 Aligned_cols=46 Identities=28% Similarity=0.428 Sum_probs=38.6
Q ss_pred ccccHHHHHHHhhccccccccccCCCcceEEEEEE-CCcEEEEEEccC
Q 010658 449 REYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLNN 495 (505)
Q Consensus 449 ~~~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~~ 495 (505)
..+++.++..++++|.....||.|+ ||.||+|.. +|..||||++..
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~vavK~~~~ 73 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGV-FGKVYKGVLRDGAKVALKRRTP 73 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCS-SSEEEEEECTTCCEEEEEECCS
T ss_pred eeecHHHHHHHHhccCccceeecCC-CeeEEEEEECCCCEEEEEEecc
Confidence 3466677788999999999999999 999999998 489999999874
No 32
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=94.39 E-value=0.019 Score=57.47 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=24.9
Q ss_pred ccccccccCCCcceEEEEEECCcEEEEEEccC
Q 010658 464 SERFRLKCAGDWTNVYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 464 s~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~ 495 (505)
.-...||.|+ ||.||+|.+.+ .||||.++.
T Consensus 39 ~l~~~iG~G~-fG~Vy~~~~~~-~vAvK~~~~ 68 (307)
T 3omv_A 39 MLSTRIGSGS-FGTVYKGKWHG-DVAVKILKV 68 (307)
T ss_dssp CEEEECCCCS-SSEEEEEESSS-EEEEEECCC
T ss_pred EEeeEEeeCC-CcEEEEEEECC-cEEEEEEEe
Confidence 3355899999 99999999865 599999963
No 33
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=94.06 E-value=0.0097 Score=58.63 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.2
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|....+||.|+ ||.||+|.. +|..||||++..
T Consensus 57 ~~y~~~~~LG~G~-~g~Vy~~~~~~~~~~vavK~~~~ 92 (311)
T 3p1a_A 57 QSFQRLSRLGHGS-YGEVFKVRSKEDGRLYAVKRSMS 92 (311)
T ss_dssp HHEEEEEEEEEET-TEEEEEEEETTTSCEEEEEEESS
T ss_pred hheeeeheeccCC-CeEEEEEEECCCCeEEEEEEecc
Confidence 6788888999999 999999998 489999999864
No 34
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=93.64 E-value=0.28 Score=51.69 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHH
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKT 80 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 80 (505)
|...+.+|+||+.|... |..+|.++.......+..|+++||..... | .+ .
T Consensus 14 l~~~~~~vlVa~SGG~D-S~~Ll~ll~~~~~~~~~~v~avhvdhglr---------g--------~~------------s 63 (464)
T 3a2k_A 14 LLSEGAAVIVGVSGGPD-SLALLHVFLSLRDEWKLQVIAAHVDHMFR---------G--------RE------------S 63 (464)
T ss_dssp SSSCSSBEEEECCSSHH-HHHHHHHHHHHHHTTTCBCEEEEEECTTC---------T--------HH------------H
T ss_pred CCCCCCEEEEEEcCcHH-HHHHHHHHHHHHHHcCCeEEEEEEECCCC---------c--------cc------------c
Confidence 34457899999999997 98766666555544577899999953210 0 00 1
Q ss_pred HHHHHHHHhhhccCccEEEEEecC--------CCCh--------HHHHHHHHHHcCCCEEEEccCC
Q 010658 81 DNLLSKYLGFCGKVKAEILKVEKS--------DEPV--------HKLILDLVSRLTITKLVMGLSF 130 (505)
Q Consensus 81 ~~lL~~~~~~c~~v~ve~~vve~~--------~~d~--------~~~Ive~a~~~~idlLVmGs~g 130 (505)
..-......+|...++...++..+ +.++ ...+.++|.++|++.|++|.+.
T Consensus 64 ~~~~~~v~~~~~~lgi~~~v~~~~~~~~~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~ 129 (464)
T 3a2k_A 64 EEEMEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHG 129 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTTCCSHHHHHHHHHHHHHHHHHTTTCCEEECCCCH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEechhhhhhccCCCHHHHHHHHHHHHHHHHHHHcCcCEEEEeCCh
Confidence 111334556677555555544431 1111 1455678889999999999874
No 35
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=93.48 E-value=0.046 Score=57.04 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=33.6
Q ss_pred hccccccccccCCCcceEEEEEECCcEEEEEEccCCCChhhhh
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQ 503 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~~~~~~eF~ 503 (505)
++|.-...||.|+ ||.||+|...|..||||.+........|.
T Consensus 193 ~~~~~~~~lG~G~-fg~V~~~~~~~~~vavK~~~~~~~~~~~~ 234 (450)
T 1k9a_A 193 KELKLLQTIGKGE-FGDVMLGDYRGNKVAVKCIKNDATAQAFL 234 (450)
T ss_dssp GGEEEEEEEEECS-SEEEEEEEETTEEEEEEEESSCTTSHHHH
T ss_pred HHeEEEeeecCcC-CeeEEEEEecCCeEEEEEeCCchHHHHHH
Confidence 4466667999999 99999999999999999997544444454
No 36
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=93.47 E-value=0.064 Score=51.34 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=33.5
Q ss_pred hhccccccccccCCCcceEEEEEECCcEEEEEEccCCCChhhhh
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQ 503 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~~~~~~eF~ 503 (505)
.++|.-...||.|+ ||.||+|...|..||||.+........|.
T Consensus 20 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~vavK~~~~~~~~~~~~ 62 (278)
T 1byg_A 20 MKELKLLQTIGKGE-FGDVMLGDYRGNKVAVKCIKNDATAQAFL 62 (278)
T ss_dssp GGGEEEEEEEEECS-SCEEEEEEETTEEEEEEECCCCC--HHHH
T ss_pred hhhceEEeEEecCC-CceEEEEEEcCCEEEEEEecchhHHHHHH
Confidence 35677778999999 99999999999999999997544334443
No 37
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=93.25 E-value=0.05 Score=55.31 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=26.7
Q ss_pred cccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 463 FSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
|..-..||+|+ ||.||+|.- .|..||||++.
T Consensus 76 y~~~~~iG~G~-fG~V~~a~~~~tg~~vAiK~i~ 108 (346)
T 4fih_A 76 LDNFIKIGEGS-TGIVCIATVRSSGKLVAVKKMD 108 (346)
T ss_dssp EEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEE
T ss_pred cEEeEEeecCc-CeEEEEEEECCCCCEEEEEEEe
Confidence 44556899999 999999987 48999999996
No 38
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=92.73 E-value=0.045 Score=57.26 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=36.1
Q ss_pred ccHHHHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
+.+.++...+++|.-..+||.|+ ||.||+|.. .|..||||++.
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~-fG~V~~~~~~~~~~~vAvK~~~ 108 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGA-FGEVAVVKLKNADKVFAMKILN 108 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCC-CEEEEEEEEcCCCcEEEEEEEE
Confidence 34456666788999999999999 999999998 37899999985
No 39
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=92.72 E-value=0.56 Score=46.72 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=30.1
Q ss_pred CCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCe-EEEEEEe
Q 010658 2 DTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSIS-IVILHVT 43 (505)
Q Consensus 2 ~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~-IvllHV~ 43 (505)
...+.+|+||+.|... |..+|.++.......|.. |+++||.
T Consensus 21 ~~~~~~vlva~SGG~D-S~~Ll~ll~~~~~~~g~~~v~av~vd 62 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVD-SVVLTDVLLKLKNYFSLKEVALAHFN 62 (317)
T ss_dssp CSSCCEEEEECCSSHH-HHHHHHHHHHSTTTTTCSEEEEEEEE
T ss_pred CCCCCEEEEEecchHH-HHHHHHHHHHHHHHcCCCEEEEEEEE
Confidence 3457899999999997 886666555544344667 9999994
No 40
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=92.69 E-value=0.022 Score=55.95 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=36.9
Q ss_pred ccccccHHHHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 447 ~~~~~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
....+++.++...++.|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 10 ~~~~~~~~~l~~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~ 59 (326)
T 2x7f_A 10 SLDEIDLSALRDPAGIFELVELVGNGT-YGQVYKGRHVKTGQLAAIKVMDV 59 (326)
T ss_dssp ------CCCCCCCTTTEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEC
T ss_pred cchhccchhccCCCCcEEEEEEeccCC-CEEEEEEEECCCCCeEEEEEEec
Confidence 345566667777888899899999999 999999998 588999999863
No 41
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.64 E-value=4.1 Score=52.38 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhH
Q 010658 361 RDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRI 426 (505)
Q Consensus 361 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~ 426 (505)
.++.++..+|...+.++.+++.++++.+..+.+++++++.+..+.+.+..+.+..++.=+.|.+-+
T Consensus 2014 ~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li 2079 (3245)
T 3vkg_A 2014 EEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALL 2079 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555555555555555555555666666666666666666555555444434444433
No 42
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=92.63 E-value=0.056 Score=54.75 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=29.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|....+||.|+ ||.||+|.- .|..||||+++.
T Consensus 57 ~~~~~~~~~lG~G~-fG~Vy~a~~~~~g~~vAiK~i~~ 93 (336)
T 4g3f_A 57 VHWMTHQPRVGRGS-FGEVHRMKDKQTGFQCAVKKVRL 93 (336)
T ss_dssp TTEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEET
T ss_pred hhheEeCcEeccCC-CeEEEEEEECCCCCEEEEEEECH
Confidence 45677777899999 999999987 489999999963
No 43
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=92.47 E-value=0.081 Score=55.27 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=27.6
Q ss_pred ccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 462 ~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.|..-..||+|+ ||.||+|.- .|..||||++.
T Consensus 152 ~y~~~~~iG~G~-fG~V~~a~~~~tg~~vAiK~i~ 185 (423)
T 4fie_A 152 YLDNFIKIGEGS-TGIVCIATVRSSGKLVAVKKMD 185 (423)
T ss_dssp TEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEE
T ss_pred hcEeeeEeccCc-CcEEEEEEECCCCCEEEEEEEe
Confidence 355566899999 999999987 48999999996
No 44
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=92.41 E-value=0.075 Score=52.40 Aligned_cols=34 Identities=15% Similarity=0.107 Sum_probs=30.3
Q ss_pred hhccccccccccCCCcceEEEEEECCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~ 494 (505)
.++|.-..+||.|+ ||.||+|...|..||||++.
T Consensus 23 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~vavK~~~ 56 (322)
T 3soc_A 23 SMPLQLLEVKARGR-FGCVWKAQLLNEYVAVKIFP 56 (322)
T ss_dssp TEEEEEEEEEECST-TCEEEEEEETTEEEEEEEEC
T ss_pred hhhchhhheecccC-ceEEEEEEECCCEEEEEEee
Confidence 35677788999999 99999999999999999985
No 45
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=92.20 E-value=0.089 Score=52.75 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=30.8
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++.|.-...||.|+ ||.||+|.. .+..||||.+..
T Consensus 51 ~~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~vavK~~~~ 88 (349)
T 2w4o_A 51 LSDFFEVESELGRGA-TSIVYRCKQKGTQKPYALKVLKK 88 (349)
T ss_dssp GGGTEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEC
T ss_pred ccCcEEEeeEEeeCC-CEEEEEEEECCCCcEEEEEEecc
Confidence 456688788999999 999999998 367999999974
No 46
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=92.19 E-value=0.098 Score=53.18 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=27.8
Q ss_pred hccccccccccCCCcceEEEEEECC-------cEEEEEEccCC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLNH-------ASVAIKTLNNG 496 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~g-------~~VAVK~L~~~ 496 (505)
++|.-...||.|+ ||.||+|...+ ..||||++...
T Consensus 64 ~~~~l~~~LG~G~-fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~ 105 (353)
T 4ase_A 64 DRLKLGKPLGRGA-FGQVIEADAFGIDKTATCRTVAVKMLKEG 105 (353)
T ss_dssp GGEEEEEEEEECS-SEEEEEEEEETSSSTTCEEEEEEEEECTT
T ss_pred HHeEEeeEEecCC-CeEEEEEEEcCCCcccCCeEEEEEEEccc
Confidence 4556667899999 99999998732 57999999753
No 47
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=91.97 E-value=0.068 Score=54.46 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=29.6
Q ss_pred HhhccccccccccCCCcceEEEEEE--C---CcEEEEEEccCCC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--N---HASVAIKTLNNGL 497 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~---g~~VAVK~L~~~~ 497 (505)
..+.|.-...||+|+ ||.||+|.- + +..||||++....
T Consensus 19 l~~~Y~i~~~lG~G~-fg~Vy~a~~~~~~~~~~~vAiK~i~~~~ 61 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGT-FSSVYLATAQLQVGPEEKIALKHLIPTS 61 (361)
T ss_dssp GGGTCEEEEEEEECS-SEEEEEEEEEBTTSCEEEEEEEEECTTS
T ss_pred ccCcEEEEEEEeccc-CcEEEEEEEcccCCCCCEEEEEEEcccc
Confidence 345677778999999 999999974 2 5689999986533
No 48
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=91.85 E-value=0.12 Score=53.92 Aligned_cols=44 Identities=30% Similarity=0.470 Sum_probs=34.2
Q ss_pred HhhccccccccccCCCcceEEEEEEC-CcEEEEEEccCC-CChhhhh
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQ 503 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~-g~~VAVK~L~~~-~~~~eF~ 503 (505)
..++|.-...||.|+ ||.||+|... +..||||.+... .....|.
T Consensus 186 ~~~~~~~~~~lG~G~-fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~ 231 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQ-FGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 231 (454)
T ss_dssp CGGGEEEEEEEECCS-SEEEEEEEETTTEEEEEEEECTTSBCHHHHH
T ss_pred chHHeEEEEEcccCC-ceEEEEEEECCccEEEEEEecCCCccHHHHH
Confidence 346677778999999 9999999994 789999999743 2444554
No 49
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=91.76 E-value=0.072 Score=55.21 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=35.8
Q ss_pred ccHHHHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
+.+.++...+++|.-...||.|+ ||.||++.. .|..||||+++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~-fG~V~~~~~~~~~~~vAiK~l~ 95 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGA-FSEVAVVKMKQTGQVYAMKIMN 95 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEEe
Confidence 34445555678899899999999 999999998 48999999985
No 50
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=91.72 E-value=0.069 Score=52.88 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=30.0
Q ss_pred hhccccccccccCCCcceEEEEEECCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|.-.|..||||++.
T Consensus 19 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~vAvK~~~ 52 (336)
T 2vuw_A 19 TEKLQRCEKIGEGV-FGEVFQTIADHTPVAIKIIA 52 (336)
T ss_dssp HHHHHTCEEEEEET-TEEEEEEEETTEEEEEEEEE
T ss_pred cccchheeeecccC-ceEEEEEEeCCceEEEEEEe
Confidence 35567778999999 99999999889999999996
No 51
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=91.53 E-value=0.11 Score=51.96 Aligned_cols=43 Identities=14% Similarity=0.148 Sum_probs=37.7
Q ss_pred ccHHHHHHHhhccccccccccCCCcceEEEEEE-CCcEEEEEEcc
Q 010658 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLN 494 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~ 494 (505)
..+.++...++.|.-...||.|+ ||.||+|.. .|..||||++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~ 55 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGS-YGAVCAGVDSEGIPVAIKRVF 55 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEET-TEEEEEEECTTSCEEEEEEEC
T ss_pred HHHHHHHHhccceEEeEEeccCC-CEEEEEEECCCCCeEEEEecc
Confidence 44567788889999999999999 999999987 58999999986
No 52
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=91.52 E-value=0.085 Score=54.32 Aligned_cols=36 Identities=6% Similarity=-0.148 Sum_probs=30.9
Q ss_pred HHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 458 ~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
..+.+|....+||.|+ ||.||+|.- .|..||||++.
T Consensus 75 ~~~~~~~~~~~LG~G~-fG~Vy~a~~~~~g~~vAvK~~~ 112 (413)
T 3dzo_A 75 ERPRTLVRGTVLGQED-PYAYLEATDQETGESFEVHVPY 112 (413)
T ss_dssp SCCEEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEC
T ss_pred CCceeEEEecccccCC-CEEEEEEEecCCCCceEEEEEe
Confidence 3456677788999999 999999996 48999999987
No 53
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=91.46 E-value=0.092 Score=53.46 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=23.4
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.- .|..||||+++.
T Consensus 24 e~Y~~~~~lG~G~-fg~V~~a~~~~~~~~vAiK~i~~ 59 (350)
T 4b9d_A 24 EKYVRLQKIGEGS-FGKAILVKSTEDGRQYVIKEINI 59 (350)
T ss_dssp CCEEEEEEC-------CEEEEEETTTCCEEEEEEEEC
T ss_pred cceEEeEEEecCC-CeEEEEEEECCCCCEEEEEEEeh
Confidence 5677778999999 999999986 589999999974
No 54
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=91.40 E-value=0.11 Score=51.46 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=24.4
Q ss_pred cccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 467 ~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..||.|+ ||.||+|.- .|..||||++..
T Consensus 32 ~~iG~G~-fg~Vy~a~~~~~~~~vAiK~i~~ 61 (290)
T 3fpq_A 32 IEIGRGS-FKTVYKGLDTETTVEVAWCELQD 61 (290)
T ss_dssp EEEEECS-SEEEEEEEETTTCCEEEEEEEEG
T ss_pred eEEecCc-CcEEEEEEECCCCeEEEEEEEch
Confidence 4799999 999999987 478999999963
No 55
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=91.38 E-value=0.11 Score=53.68 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=28.9
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|.- .|..||||++..
T Consensus 54 ~~Y~~~~~lG~G~-fG~V~~a~~~~t~~~vAiK~i~~ 89 (398)
T 4b99_A 54 DEYEIIETIGNGA-YGVVSSARRRLTGQQVAIKKIPN 89 (398)
T ss_dssp SSEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEETT
T ss_pred CCeEEEEEEeccc-CeEEEEEEECCCCCEEEEEEECc
Confidence 3466677999999 999999986 589999999964
No 56
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=91.25 E-value=0.058 Score=53.83 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=39.2
Q ss_pred ccccccHHHHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 447 ~~~~~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
....|++.+.....+.|.-..+||.|+ ||.||+|.. .|..||||.+..
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 70 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGT-FGRVLLCQHIDNKKYYAVKVVRN 70 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEECS
T ss_pred cceeeeeecceEecCEEEEEEEEcccC-CeEEEEEEECCCCeEEEEEEecc
Confidence 344566666666678899899999999 999999998 588999999863
No 57
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=91.13 E-value=0.16 Score=48.62 Aligned_cols=42 Identities=29% Similarity=0.400 Sum_probs=29.3
Q ss_pred hhccccccccccCCCcceEEEEEEC-CcEEEEEEccCCC-Chhhh
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN-HASVAIKTLNNGL-SEEDF 502 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~-g~~VAVK~L~~~~-~~~eF 502 (505)
.++|.-...||.|+ ||.||+|... +..||||++.... ....|
T Consensus 23 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~vavK~~~~~~~~~~~~ 66 (283)
T 3gen_A 23 PKDLTFLKELGTGQ-FGVVKYGKWRGQYDVAIKMIKEGSMSEDEF 66 (283)
T ss_dssp GGGEEEEEECC----CEEEEEEEETTTEEEEEEEECTTSBCHHHH
T ss_pred HHHHHhHhhcCCCC-CceEEEEEEcCCCeEEEEEecCCCCCHHHH
Confidence 45677778999999 9999999984 6789999997432 33444
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=91.07 E-value=0.14 Score=50.40 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=30.7
Q ss_pred hhccccccccccCCCcceEEEEEECCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|...|..||||.+..
T Consensus 36 ~~~y~i~~~lG~G~-~g~V~~~~~~~~~vavK~~~~ 70 (309)
T 3p86_A 36 WCDLNIKEKIGAGS-FGTVHRAEWHGSDVAVKILME 70 (309)
T ss_dssp GGGEEEEEEEEECS-SEEEEEEEETTEEEEEEEECC
T ss_pred hhHceeeeEeecCC-CeEEEEEEECCCcEEEEEecC
Confidence 45677778999999 999999999999999999964
No 59
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=91.00 E-value=0.45 Score=56.00 Aligned_cols=10 Identities=10% Similarity=0.584 Sum_probs=6.2
Q ss_pred HHHHHHHhhh
Q 010658 22 TLDWTIRKWK 31 (505)
Q Consensus 22 AL~WAl~~~~ 31 (505)
.|.|-+..+.
T Consensus 437 lF~wlv~~iN 446 (1184)
T 1i84_S 437 LFRWILTRVN 446 (1184)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 4567776653
No 60
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=90.67 E-value=12 Score=35.81 Aligned_cols=60 Identities=8% Similarity=-0.007 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhHh
Q 010658 361 RDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIA----RAEIVKDIEELRRQRD 420 (505)
Q Consensus 361 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~----~~~~~~~~~~l~~~r~ 420 (505)
.+...+..++..++++...+...+......+.+++..+...... .+++..+++.+..+|.
T Consensus 104 ~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~ 167 (256)
T 3na7_A 104 ERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKE 167 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444444444444444444444444333222 2344455555655654
No 61
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=90.66 E-value=3.6 Score=35.42 Aligned_cols=73 Identities=19% Similarity=0.268 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 347 RDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLST-----------MAKGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 347 e~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-----------~~~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
+.|...|.++-++++.+..+..+|+.+..++..|+..+.+.. ..+.++|.+|..+-...+...+++..|
T Consensus 29 ~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~L 108 (129)
T 3tnu_B 29 DDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQEL 108 (129)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 445666777888888888888888887777777777766543 334445555554444444444455555
Q ss_pred HHhH
Q 010658 416 RRQR 419 (505)
Q Consensus 416 ~~~r 419 (505)
...+
T Consensus 109 lnvK 112 (129)
T 3tnu_B 109 MNTK 112 (129)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 62
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=90.62 E-value=0.13 Score=51.44 Aligned_cols=33 Identities=30% Similarity=0.268 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
++|.-...||+|+ ||.||++.- .|..||||.+.
T Consensus 32 ~dy~i~~~lG~G~-fg~V~~a~~~~~~~~~AiK~i~ 66 (311)
T 4aw0_A 32 EDFKFGKILGEGS-FSTVVLARELATSREYAIKILE 66 (311)
T ss_dssp GGEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred cccEEEEEEeccc-CeEEEEEEECCCCCEEEEEEEE
Confidence 4677778999999 999999986 58999999996
No 63
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=90.52 E-value=0.18 Score=52.56 Aligned_cols=43 Identities=35% Similarity=0.490 Sum_probs=33.0
Q ss_pred hhccccccccccCCCcceEEEEEEC-CcEEEEEEccCC-CChhhhh
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQ 503 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~-g~~VAVK~L~~~-~~~~eF~ 503 (505)
.++|.-...||.|+ ||.||+|... +..||||.+... .....|.
T Consensus 183 ~~~~~~~~~lG~G~-fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~ 227 (452)
T 1fmk_A 183 RESLRLEVKLGQGC-FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFL 227 (452)
T ss_dssp GGGEEEEEEEEECS-SCEEEEEEETTTEEEEEEECCTTSSCHHHHH
T ss_pred hhHceeeeeecCCC-CeEEEEEEECCCceEEEEEeccCCCCHHHHH
Confidence 35566778999999 9999999995 568999999753 2444554
No 64
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=90.39 E-value=0.17 Score=50.31 Aligned_cols=41 Identities=24% Similarity=0.195 Sum_probs=24.9
Q ss_pred HHHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 454 EDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 454 ~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.......++|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~ 58 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGT-FGTVQLGKEKSTGMSVAIKKVIQ 58 (360)
T ss_dssp HHHHHHHTTEEEC-----------CEEEEETTTCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCC-CeEEEEEEECCCCCEEEEEEEec
Confidence 34556778899999999999 999999998 488999999853
No 65
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=90.36 E-value=0.13 Score=50.36 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=32.0
Q ss_pred HHhhccccccccccCCCcceEEEEEECCcEEEEEEcc
Q 010658 458 LATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLN 494 (505)
Q Consensus 458 ~AT~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~ 494 (505)
...+.|.-...||.|+ ||.||+|...|..||||++.
T Consensus 34 ~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~vavK~~~ 69 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGR-YGEVWMGKWRGEKVAVKVFF 69 (337)
T ss_dssp THHHHCEEEEEEEEET-TEEEEEEEETTEEEEEEEEE
T ss_pred ccccceEEEeEeecCC-CeEEEEEEECCceEEEEEEe
Confidence 3456788889999999 99999999999999999985
No 66
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=90.23 E-value=0.17 Score=49.10 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=25.4
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccCC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG 496 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~~ 496 (505)
.+.|.....||.|+ ||.||+|.. .|..||||.+...
T Consensus 28 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~~ 65 (314)
T 3com_A 28 EEVFDVLEKLGEGS-YGSVYKAIHKETGQIVAIKQVPVE 65 (314)
T ss_dssp --CEEEEEECC-----CEEEEEEETTTCCEEEEEEEETT
T ss_pred hhhhhhheeeccCC-CeEEEEEEECCCCCEEEEEecCch
Confidence 45577778999999 999999998 3889999999753
No 67
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=89.76 E-value=0.16 Score=52.46 Aligned_cols=39 Identities=23% Similarity=0.282 Sum_probs=32.7
Q ss_pred HHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 455 DIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 455 el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
++...+++|.-...||.|+ ||.||+|.. .|..||||++.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~-fG~V~~~~~~~~~~~~AiK~~~ 103 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGA-FGEVQLVRHKSTRKVYAMKLLS 103 (410)
T ss_dssp HHSCCGGGEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEE
T ss_pred hcccCccccEEEEEEEcCC-CEEEEEEEECCCCcEEEEEEEe
Confidence 4444567788888999999 999999998 47899999985
No 68
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=89.43 E-value=0.26 Score=47.88 Aligned_cols=34 Identities=6% Similarity=-0.050 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEEC--CcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~--g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|.-. |..||||.+..
T Consensus 31 ~~y~i~~~lg~G~-~g~Vy~a~~~~~~~~vavK~~~~ 66 (286)
T 3uqc_A 31 GRYRLLIFHGGVP-PLQFWQALDTALDRQVALTFVDP 66 (286)
T ss_dssp TTEEEEEEEEBST-TCEEEEEEETTTTEEEEEEESCT
T ss_pred CcEEEEEEEcccC-CeEEEEEEecCCCceEEEEEECc
Confidence 4466667999999 9999999983 89999999974
No 69
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=89.38 E-value=0.28 Score=49.33 Aligned_cols=38 Identities=11% Similarity=0.007 Sum_probs=32.2
Q ss_pred HHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 457 RLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 457 ~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
....++|.....||.|+ ||.||+|.. +|..||||.+..
T Consensus 90 ~~~~~~y~~~~~lg~G~-~g~Vy~a~~~~~g~~vavK~~~~ 129 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGV-SSVVRRCVHRATGHEFAVKIMEV 129 (365)
T ss_dssp HHHHHHEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEET
T ss_pred hhhhhhcccceEEecCC-CEEEEEEEECCCCcEEEEEEEEc
Confidence 34456788888999999 999999998 489999999864
No 70
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=89.35 E-value=0.22 Score=49.10 Aligned_cols=32 Identities=28% Similarity=0.287 Sum_probs=25.8
Q ss_pred cccccccccCCCcceEEEEEEC-----CcEEEEEEccC
Q 010658 463 FSERFRLKCAGDWTNVYRGRLN-----HASVAIKTLNN 495 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L~-----g~~VAVK~L~~ 495 (505)
|.-...||.|+ ||.||+|... +..||||.+..
T Consensus 51 y~i~~~lG~G~-~g~V~~~~~~~~~~~~~~vavK~~~~ 87 (325)
T 3kul_A 51 IHIEKIIGSGD-SGEVCYGRLRVPGQRDVPVAIKALKA 87 (325)
T ss_dssp EEEEEEEEETT-TEEEEEEEECCTTSCCEEEEEEEECT
T ss_pred eEEeeEEEeCC-CcEEEEEEEecCCCCCceEEEEecCC
Confidence 44457899999 9999999982 34699999974
No 71
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=89.26 E-value=0.24 Score=52.87 Aligned_cols=43 Identities=35% Similarity=0.490 Sum_probs=32.9
Q ss_pred hhccccccccccCCCcceEEEEEEC-CcEEEEEEccCC-CChhhhh
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN-HASVAIKTLNNG-LSEEDFQ 503 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~-g~~VAVK~L~~~-~~~~eF~ 503 (505)
.+.|.-...||.|+ ||.||+|... +..||||.+... .....|.
T Consensus 266 ~~~~~~~~~lG~G~-fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~ 310 (535)
T 2h8h_A 266 RESLRLEVKLGQGC-FGEVWMGTWNGTTRVAIKTLKPGTMSPEAFL 310 (535)
T ss_dssp GGGEEEEEEEEECS-SEEEEEEEETTTEEEEEEEECTTSSCHHHHH
T ss_pred hhhhhhheecccCC-CeEEEEEEECCCceEEEEEeCCCCCCHHHHH
Confidence 34566677999999 9999999995 568999999753 2444554
No 72
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=89.19 E-value=0.21 Score=52.73 Aligned_cols=43 Identities=28% Similarity=0.498 Sum_probs=33.3
Q ss_pred hhccccccccccCCCcceEEEEEEC--CcEEEEEEccCC-CChhhhh
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLNNG-LSEEDFQ 503 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~--g~~VAVK~L~~~-~~~~eF~ 503 (505)
..+|.-...||.|+ ||.||+|... +..||||.+... .....|.
T Consensus 219 ~~~~~~~~~lG~G~-fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~ 264 (495)
T 1opk_A 219 RTDITMKHKLGGGQ-YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 264 (495)
T ss_dssp GGGEEEEEESGGGT-TSSEEEEEEGGGTEEEEEEECCSSSSCHHHHH
T ss_pred HHHceeeeEecCCC-CeEEEEEEEcCCCeEEEEEEecCcccchHHHH
Confidence 34577778999999 9999999984 789999999743 2444554
No 73
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=89.13 E-value=0.35 Score=47.48 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=32.4
Q ss_pred HHhhccccccccccCCCcceEEEEEECCcEEEEEEccC
Q 010658 458 LATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 458 ~AT~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~ 495 (505)
...++|.-...||.|+ ||.||+|...|..||||.+..
T Consensus 39 ~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~vavK~~~~ 75 (342)
T 1b6c_B 39 TIARTIVLQESIGKGR-FGEVWRGKWRGEEVAVKIFSS 75 (342)
T ss_dssp HHHHHCEEEEEEEEET-TEEEEEEEETTEEEEEEEECG
T ss_pred cccccEEEEeeecCCC-CcEEEEEEEcCccEEEEEeCc
Confidence 3456788888999999 999999999999999999863
No 74
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=88.96 E-value=0.23 Score=48.95 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=30.6
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..++|.....||.|+ ||.||+|.. .|..||||++..
T Consensus 49 ~~~~~~~~~~lG~G~-~g~Vy~~~~~~~~~~vavK~~~~ 86 (340)
T 3an0_A 49 KADDLEPIMELGRGA-YGVVEKMRHVPSGQIMAVKRIRA 86 (340)
T ss_dssp CSSCEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECS
T ss_pred ehhheeEeeEecccC-CEEEEEEEEcCCCCEEEEEEecc
Confidence 345677778899999 999999997 589999999974
No 75
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=88.90 E-value=0.26 Score=47.22 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=27.1
Q ss_pred cccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 463 FSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
|....+||.|+ ||.||+|.- +|..||||.+..
T Consensus 24 ~~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~ 57 (295)
T 2clq_A 24 NGDRVVLGKGT-YGIVYAGRDLSNQVRIAIKEIPE 57 (295)
T ss_dssp TSSBCEEEECS-SSEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCcEEEeecC-cEEEEEEEECCCCeEEEEEEccC
Confidence 45566899999 999999997 578999999864
No 76
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=88.87 E-value=7.1 Score=32.14 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=36.1
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGH 393 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e 393 (505)
++..+|......-..+...|+.++.-..++..+..++|.+...|......+.+.+....++...+.-
T Consensus 24 rae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~ 90 (101)
T 3u1c_A 24 RAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVAS 90 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444333333344555666666666666666677766666665555555555544444433333
No 77
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=88.85 E-value=0.21 Score=50.45 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=31.4
Q ss_pred HHhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 458 ~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..+++|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 51 ~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~~ 89 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGS-FGQVVKAYDRVEQEWVAIKIIKN 89 (382)
T ss_dssp EETTTEEEEEEEEEET-TEEEEEEEETTTTEEEEEEEECS
T ss_pred EeeeeEEEEEEEeecC-CEEEEEEEEcCCCcEEEEEEEec
Confidence 3467788888999999 999999987 478999999963
No 78
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=88.75 E-value=0.28 Score=49.11 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=29.7
Q ss_pred hhccccccccccCCCcceEEEEEE-----CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL-----NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L-----~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||++.. .|..||||++.
T Consensus 53 ~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~vavK~~~ 91 (355)
T 1vzo_A 53 IENFELLKVLGTGA-YGKVFLVRKISGHDTGKLYAMKVLK 91 (355)
T ss_dssp GGGEEEEEEEEETT-TEEEEEEEECSSTTTTCEEEEEEES
T ss_pred ccceEEEEEeccCC-CEEEEEEEEcccCCCCeEEEEEEEe
Confidence 36788888999999 999999987 47899999985
No 79
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=88.74 E-value=0.26 Score=48.82 Aligned_cols=44 Identities=18% Similarity=0.245 Sum_probs=34.6
Q ss_pred ccHHHHHHHhhccccccccccCCCcceEEEEEE-------CCcEEEEEEccC
Q 010658 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNN 495 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L-------~g~~VAVK~L~~ 495 (505)
+.........++|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~ 62 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGA-FGQVIEADAFGIDKTATCRTVAVKMLKE 62 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECS-SEEEEEEEEESSSSTTCEEEEEEEEECT
T ss_pred CCcccccccccceeeceeecCCC-CceEEEEEeccccccccceEEEEEEecC
Confidence 44444445678888889999999 999999984 247899999974
No 80
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=88.67 E-value=0.29 Score=46.80 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=29.6
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+.|.-...||.|+ ||.||+|.. +|..||||.+.
T Consensus 18 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~ 53 (287)
T 4f0f_A 18 DNEIEYEKQIGKGG-FGLVHKGRLVKDKSVVAIKSLI 53 (287)
T ss_dssp STTEEEEEECCCCS-SSCEEEEEETTTCCEEEEEECC
T ss_pred hccceehhccccCC-ceeEEEEEEcCCceEEEEEEee
Confidence 35677778999999 999999998 58899999996
No 81
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=88.56 E-value=15 Score=42.58 Aligned_cols=9 Identities=11% Similarity=0.641 Sum_probs=5.1
Q ss_pred HHHHHHHhh
Q 010658 22 TLDWTIRKW 30 (505)
Q Consensus 22 AL~WAl~~~ 30 (505)
.|.|-+..+
T Consensus 411 LF~wlV~~i 419 (1080)
T 2dfs_A 411 LFNWIVDHV 419 (1080)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 356766544
No 82
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=88.51 E-value=7.2 Score=32.03 Aligned_cols=66 Identities=15% Similarity=0.137 Sum_probs=35.8
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKG 392 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 392 (505)
++..+|......-......++.+..-+.++..+..++|.+...|......+.+.+....++...+.
T Consensus 24 ~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~eva 89 (101)
T 3u59_A 24 RAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVA 89 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444433333233445566666666667777777777766666555555555544444443333
No 83
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=88.43 E-value=0.26 Score=54.57 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=30.0
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-..+||.|+ ||.||++.- .|..||||++.
T Consensus 188 lddf~i~k~LG~G~-fG~V~la~~~~tg~~~AiK~i~ 223 (689)
T 3v5w_A 188 MNDFSVHRIIGRGG-FGEVYGCRKADTGKMYAMKCLD 223 (689)
T ss_dssp GGGEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEE
T ss_pred hHHeEEEEEEeccc-CeEEEEEEECCCCCEEEEEEEe
Confidence 36688888999999 999999988 48999999985
No 84
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=88.36 E-value=6.4 Score=31.63 Aligned_cols=56 Identities=13% Similarity=0.184 Sum_probs=30.6
Q ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 333 SLTKEDVASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLST 388 (505)
Q Consensus 333 ~~~~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~ 388 (505)
..+.++-..|++++.....--++-..+..++.++-++...+..++.+|+.++.+.+
T Consensus 28 e~l~k~e~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~ 83 (89)
T 3bas_A 28 EDLAKTERIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLK 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556677777555544444444444455555555555566666666555544
No 85
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=88.22 E-value=0.21 Score=49.94 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=29.6
Q ss_pred HhhccccccccccCCCcceEEEEE------E-CCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGR------L-NHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~------L-~g~~VAVK~L~~ 495 (505)
..+.|.-...||.|+ ||.||+|. . .|..||||++..
T Consensus 63 ~~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~ 105 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGA-FAQVYEATQGDLNDAKNKQKFVLKVQKP 105 (365)
T ss_dssp SSSEEEEEEEEEECS-SEEEEEEEC-------CCCCEEEEEESS
T ss_pred CCEEEEEEEEeeccC-CEEEEEEEecCCcccccCcEEEEEEeCC
Confidence 456677788999999 99999994 3 578999999964
No 86
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=88.11 E-value=0.28 Score=50.53 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=28.6
Q ss_pred ccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 462 ~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.|.....||.|+ ||.||+|.. .|..||||++..
T Consensus 55 ~y~~~~~lG~G~-fg~Vy~~~~~~~~~~vaiK~~~~ 89 (420)
T 1j1b_A 55 SYTDTKVIGNGS-FGVVYQAKLCDSGELVAIKKVLQ 89 (420)
T ss_dssp EEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEEC
T ss_pred eEEeeeEEeeCC-CEEEEEEEECCCCcEEEEEEecc
Confidence 466678999999 999999998 489999999863
No 87
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=88.08 E-value=0.29 Score=47.85 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEE-CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~~ 495 (505)
.+.|.-...||.|+ ||.||+|.. +|..||||++..
T Consensus 20 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~vavK~~~~ 55 (311)
T 3niz_A 20 MEKYQKLEKVGEGT-YGVVYKAKDSQGRIVALKRIRL 55 (311)
T ss_dssp SCEEEEEEEEEECS-SCEEEEEEETTSCEEEEEEEC-
T ss_pred HhhhHhhhhccCCC-CeEEEEEEECCCCEEEEEEEec
Confidence 35666678999999 999999998 689999999963
No 88
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=88.03 E-value=5.9 Score=42.35 Aligned_cols=27 Identities=19% Similarity=0.129 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 389 MAKGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 389 ~~~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
..+.++++++........+++++.+.+
T Consensus 544 ~~~~~le~~~~~~~~~~~~l~~e~~~~ 570 (597)
T 3oja_B 544 QENIALEKQLDNKRAKQAELRQETSLK 570 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 333444444444333444444444333
No 89
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=87.91 E-value=0.29 Score=49.00 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=29.9
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
...|.....||.|+ ||.||+|.- +|..||||++..
T Consensus 53 ~~~y~~~~~lG~G~-~g~Vy~a~~~~~~~~vaiK~~~~ 89 (348)
T 1u5q_A 53 EKLFSDLREIGHGS-FGAVYFARDVRNSEVVAIKKMSY 89 (348)
T ss_dssp HHHEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEES
T ss_pred hhheeeeeEEccCC-CEEEEEEEEccCCeEEEEEEEcc
Confidence 35577788999999 999999986 588999999963
No 90
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=87.85 E-value=0.29 Score=49.10 Aligned_cols=36 Identities=28% Similarity=0.340 Sum_probs=30.3
Q ss_pred HHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 458 ~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
...++|.-...||.|+ ||.||+|.. .|..||||.+.
T Consensus 14 ~~~~~y~~~~~lG~G~-fg~V~~~~~~~~~~~vaiK~~~ 51 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGS-FGKVFLAEFKKTNQFFAIKALK 51 (345)
T ss_dssp --CTTEEEEEEEEECS-SSEEEEEEETTTTEEEEEEEEE
T ss_pred CChHHeEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEEE
Confidence 3456788888999999 999999998 47899999986
No 91
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=87.84 E-value=0.22 Score=50.21 Aligned_cols=34 Identities=6% Similarity=-0.123 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|.. +|..||||++.
T Consensus 72 ~~~y~~~~~lG~G~-~g~V~~a~~~~~~~~vavK~~~ 107 (377)
T 3byv_A 72 PRTLVRGTVLGQED-PYAYLEATDQETGESFEVHVPY 107 (377)
T ss_dssp CEEEEEEEEEEEET-TEEEEEEEC-CCCCEEEEEEEE
T ss_pred CceEEEcceeecCC-CEEEEEEEECCCCcEEEEEEEe
Confidence 45677778999999 999999996 48999999986
No 92
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=87.83 E-value=0.4 Score=47.60 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=29.2
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.....||.|+ ||.||+|.. .|..||||.+..
T Consensus 24 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~ 59 (353)
T 3coi_A 24 KTYVSPTHVGSGA-YGSVCSAIDKRSGEKVAIKKLSR 59 (353)
T ss_dssp TTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEESS
T ss_pred ceEEEeeeEecCC-CeEEEEEEECCCCCEEEEEEecc
Confidence 4566778999999 999999987 488999999964
No 93
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=87.75 E-value=0.31 Score=47.72 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=28.6
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.....||.|+ ||.||+|.. +|..||||.+..
T Consensus 22 ~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~ 57 (327)
T 3aln_A 22 EDLKDLGEIGRGA-YGSVNKMVHKPSGQIMAVKRIRS 57 (327)
T ss_dssp CSEEC-CEEEECS-SEEEEEEEETTTTEEEEEEEEEC
T ss_pred HHhhehheeccCC-CEEEEEEEEcCCCCEEEEEEeec
Confidence 5567778999999 999999998 488999999964
No 94
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=87.70 E-value=0.3 Score=49.29 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=29.2
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. +|..||||.+..
T Consensus 114 ~~~~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 149 (377)
T 3cbl_A 114 EDLVLGEQIGRGN-FGEVFSGRLRADNTLVAVKSCRE 149 (377)
T ss_dssp GGEEEEEEEEEET-TEEEEEEEETTTCCEEEEEECCT
T ss_pred HHeEEeeEeccCC-CCeEEEEEEecCCeEEEEEEccc
Confidence 4566677999999 999999998 488999999864
No 95
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=87.64 E-value=0.25 Score=50.07 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=21.5
Q ss_pred ccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 464 s~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.....||.|+ ||.||+|.. .|..||||.+..
T Consensus 92 ~~~~~lG~G~-~g~Vy~a~~~~~g~~vavK~~~~ 124 (373)
T 2x4f_A 92 SKTEILGGGR-FGQVHKCEETATGLKLAAKIIKT 124 (373)
T ss_dssp EEEEECC------CEEEEEETTTCCEEEEEEEEC
T ss_pred ecceEEecCc-CEEEEEEEEcCCCcEEEEEEEcc
Confidence 4456799999 999999987 488999999864
No 96
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=87.60 E-value=19 Score=35.13 Aligned_cols=121 Identities=16% Similarity=0.075 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhHHhhHHHHHHHHHHHHHHHHhhhhHHHHhhhhHHHHHhHHHHH-----HHHH-HHHHHHHHHHHHHHH
Q 010658 292 KINEAREMIRLKKKETKDDAERCAKAKWAICLCNSRADQLESLTKEDVASRMEIQ-----RDLD-SLKEQSCEVIRDVEE 365 (505)
Q Consensus 292 ~l~ea~~~~~~~r~~~~~~~~~~~kae~~~~~~~~~~~~~e~~~~~e~~~R~e~e-----e~l~-~eke~~e~~~~~~~~ 365 (505)
.|.+-..+.+..||+.++...|.+|.--+...+.+||+..=....+|..+-+... +... .-...+++.++.-|+
T Consensus 102 ~L~~~~~e~ek~RK~~Ke~w~r~eKk~~dae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K~lek~r~~EEe 181 (279)
T 3qwe_A 102 PLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSKQQERRRRSREE 181 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhHHHhhHHH
Confidence 3333344444556666666666666555555555666555444444443222210 0000 001223334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 366 SKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 366 ~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
+..+.+... ..-...+++++....+++...-.++.++.++..+.|.-
T Consensus 182 a~~K~eeAd---~~Y~~~V~~a~~~r~eL~~tk~~~v~~Lr~LI~e~D~~ 228 (279)
T 3qwe_A 182 AQAKAQEAE---ALYQACVREANARQQDLEIAKQRIVSHVRKLVFQGDEV 228 (279)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 433333222 22234455555566666666566666666666555553
No 97
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=87.52 E-value=0.4 Score=46.46 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=28.0
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|.. +|..||||++..
T Consensus 31 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~~ 67 (310)
T 2wqm_A 31 LANFRIEKKIGRGQ-FSEVYRAACLLDGVPVALKKVQI 67 (310)
T ss_dssp GGGEEEEEEEECC---CEEEEEEETTTCCEEEEEEECT
T ss_pred ccceEEEEeecCCC-CceEEEEEEcCCCceEEEEeeeh
Confidence 35677788999999 999999997 589999999863
No 98
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=87.48 E-value=0.37 Score=47.07 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=29.1
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 36 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~ 71 (330)
T 3nsz_A 36 DDYQLVRKLGRGK-YSEVFEAINITNNEKVVVKILKP 71 (330)
T ss_dssp GGEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEECS
T ss_pred CceEEEEEecccC-CeEEEEEEECCCCcEEEEEEecc
Confidence 5566778999999 999999986 588999999864
No 99
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=87.46 E-value=0.38 Score=47.17 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=29.9
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
..+.|.-...||.|+ ||.||+|.. +|..||||.+.
T Consensus 41 ~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~ 77 (320)
T 3a99_A 41 LESQYQVGPLLGSGG-FGSVYSGIRVSDNLPVAIKHVE 77 (320)
T ss_dssp CTTTEEEEEECSSSS-SCEEEEEEETTTTEEEEEEEEE
T ss_pred ccCceEEEEEEeeCC-CeEEEEEEECCCCcEEEEEEEe
Confidence 345677788999999 999999987 58899999986
No 100
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=87.42 E-value=0.32 Score=49.52 Aligned_cols=30 Identities=13% Similarity=0.329 Sum_probs=20.2
Q ss_pred ccccccCCCcceEEEEEEC----CcEEEEEEccCC
Q 010658 466 RFRLKCAGDWTNVYRGRLN----HASVAIKTLNNG 496 (505)
Q Consensus 466 ~~~iG~gg~~G~VYkg~L~----g~~VAVK~L~~~ 496 (505)
..+||.|+ ||.||+|... +..||||++...
T Consensus 26 g~~lG~G~-~g~Vy~~~~~~~~~~~~vaiK~~~~~ 59 (405)
T 3rgf_A 26 GCKVGRGT-YGHVYKAKRKDGKDDKDYALKQIEGT 59 (405)
T ss_dssp SCCCC------EEEEEEESSSSCCCCEEEEECSSS
T ss_pred CcEeeecC-CeEEEEEEEccCCCCeEEEEEEECCC
Confidence 45899999 9999999962 678999999743
No 101
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=87.35 E-value=0.44 Score=47.92 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=29.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.....||.|+ ||.||+|.- .|..||||++..
T Consensus 41 ~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~vaiK~~~~ 77 (371)
T 4exu_A 41 PKTYVSPTHVGSGA-YGSVCSAIDKRSGEKVAIKKLSR 77 (371)
T ss_dssp ETTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECS
T ss_pred cccEEEEeEEecCC-CeEEEEEEECCCCCEEEEEEecc
Confidence 35677778999999 999999987 489999999974
No 102
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=87.32 E-value=0.42 Score=46.57 Aligned_cols=35 Identities=6% Similarity=-0.110 Sum_probs=28.4
Q ss_pred HhhccccccccccCCCcceEEEEEE-CCcEEEEEEcc
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLN 494 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~ 494 (505)
....|.-...||.|+ ||.||+|.. +|..||||.+.
T Consensus 88 ~~~~~~~~~~iG~G~-~g~Vy~~~~~~g~~valK~~~ 123 (282)
T 1zar_A 88 SGKVDAIGKLMGEGK-ESAVFNCYSEKFGECVVKFHK 123 (282)
T ss_dssp TTSCSEEEEEEEECS-SEEEEEEEETTTEEEEEEEEC
T ss_pred CCeEEEecCEeccCC-CceEEEEEeCCCCEEEEEEEE
Confidence 333444457999999 999999998 58899999996
No 103
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=87.25 E-value=0.37 Score=47.88 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=29.9
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.....||.|+ ||.||+|.. .|..||||.+..
T Consensus 23 ~~~y~~~~~lG~G~-~g~Vy~a~~~~~~~~vavK~~~~ 59 (335)
T 3dls_A 23 SQKYSTMSPLGSGA-FGFVWTAVDKEKNKEVVVKFIKK 59 (335)
T ss_dssp HHHEEEEEECSSSS-SCSEEEEEETTTTEEEEEEEEES
T ss_pred ccceEEEeEEEecC-CEEEEEEEECCCCcEEEEEEEeh
Confidence 45677778999999 999999986 588999999864
No 104
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=87.21 E-value=0.29 Score=48.44 Aligned_cols=45 Identities=29% Similarity=0.384 Sum_probs=24.6
Q ss_pred cccHHHHHHHhhcccc---------ccccccCCCcceEEEEEEC--C----cEEEEEEccC
Q 010658 450 EYAAEDIRLATEDFSE---------RFRLKCAGDWTNVYRGRLN--H----ASVAIKTLNN 495 (505)
Q Consensus 450 ~~s~~el~~AT~~Fs~---------~~~iG~gg~~G~VYkg~L~--g----~~VAVK~L~~ 495 (505)
.+...+...++..|.. ...||.|+ ||.||+|... + ..||||.+..
T Consensus 24 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~vavK~~~~ 83 (333)
T 1mqb_A 24 GAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGE-FGEVYKGMLKTSSGKKEVPVAIKTLKA 83 (333)
T ss_dssp --------------CCBCCTTTEEEEEEEEECS-SSEEEEEEEEC---CCEEEEEEEEECT
T ss_pred ccccCChhhhhhhccccCChHHhhcccEEecCC-CeEEEEEEEecCCCCccccEEEEEcCC
Confidence 3444455555555544 57899999 9999999873 1 3599999974
No 105
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=87.20 E-value=0.33 Score=48.74 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=29.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..+|.....||.|+ ||.||+|.. +|..||||++..
T Consensus 61 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 97 (371)
T 3q60_A 61 ERKLKLVEPLRVGD-RSVVFLVRDVERLEDFALKVFTM 97 (371)
T ss_dssp EEEEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEEC
T ss_pred ceeeeeeeeccCCC-CEEEEEEEECCCCceeEEEEEEe
Confidence 34567778999999 999999996 588999999974
No 106
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=87.11 E-value=0.33 Score=48.22 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=27.3
Q ss_pred hccccccccccCCCcceEEEEEE-----CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL-----NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L-----~g~~VAVK~L~ 494 (505)
++|.-...||.|+ ||.||++.- .|..||||.++
T Consensus 24 ~~Y~i~~~lG~G~-fg~Vy~a~~~~~~~~~~~vAiK~i~ 61 (304)
T 3ubd_A 24 SQFELLKVLGQGS-FGKVFLVKKISGSDARQLYAMKVLK 61 (304)
T ss_dssp GGEEEEEEEECGG-GCEEEEEEECSSTTTTCEEEEEEEE
T ss_pred cccEEEEEEecCC-CeEEEEEEEccCCCCCEEEEEEEEe
Confidence 4577778999999 999999974 25789999986
No 107
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=87.09 E-value=8.4 Score=30.29 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 353 KEQSCEVIRDVEESKNRLSSLIELQSELSNKL 384 (505)
Q Consensus 353 ke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~ 384 (505)
|.++..++.+.|.+..++......+...+.+.
T Consensus 5 kkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~ 36 (81)
T 1ic2_A 5 KKKMQMLKLDKENALDRAEQAEADKKAAEERS 36 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555544444444433333
No 108
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=87.05 E-value=0.4 Score=46.02 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=29.4
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||++.. .|..||||.+..
T Consensus 22 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~aiK~~~~ 57 (285)
T 3is5_A 22 DLFIFKRKLGSGA-FGDVHLVEERSSGLERVIKTINK 57 (285)
T ss_dssp HHEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEG
T ss_pred hheeecceeccCC-CeEEEEEEEccCCceEEEEEeec
Confidence 5677788999999 999999987 478999999863
No 109
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=87.03 E-value=0.4 Score=47.13 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=33.1
Q ss_pred HHHHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 455 DIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 455 el~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+....+.|.-...||.|+ ||.||+|.. .+..||||.+.
T Consensus 20 ~~~~~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~ 60 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGS-YGVVRVAIENQTRAIRAIKIMN 60 (345)
T ss_dssp CHHHHHHHEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEE
T ss_pred hhhhhhhheeecceeeecC-CeEEEEEEECCCCceEEEeehh
Confidence 3455678888889999999 999999988 47899999985
No 110
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=86.95 E-value=0.34 Score=47.02 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=27.5
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
+.|.-...||.|+ ||.||+|.- .|..||||++.
T Consensus 20 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~ 54 (297)
T 3fxz_A 20 KKYTRFEKIGQGA-SGTVYTAMDVATGQEVAIRQMN 54 (297)
T ss_dssp GTBCCCEEEEEET-TEEEEEEEBTTTCCEEEEEEEE
T ss_pred hceeeeeeeccCC-CeEEEEEEECCCCcEEEEEEee
Confidence 3455566899999 999999986 58899999986
No 111
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=86.86 E-value=0.44 Score=47.17 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=29.6
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+.|.-...||.|+ ||.||+|.. .|..||||++.
T Consensus 16 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~ 51 (351)
T 3mi9_A 16 VSKYEKLAKIGQGT-FGEVFKARHRKTGQKVALKKVL 51 (351)
T ss_dssp GGGEEEEEECSSCS-TTSEEEEEETTTCCEEEEEECC
T ss_pred ccceeEEEEEecCC-CcEEEEEEECCCCCEEEEEEEe
Confidence 35677788999999 999999998 48899999986
No 112
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=86.76 E-value=0.12 Score=50.36 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=33.7
Q ss_pred ccHHHHHHHhhccccccccccCCCcceEEEEEE-CCcEEEEEEccC
Q 010658 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLNN 495 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~~ 495 (505)
|.+..+....+.|.-...||.|+ ||.||++.. +|..||||.+..
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~vavK~~~~ 62 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGG-SSKVFQVLNEKKQIYAIKYVNL 62 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCS-SEEEEEEECTTCCEEEEEEEEC
T ss_pred CCeeeeeeccceEEEEEEecCCC-CEEEEEEEcCCCcEEEEEEecc
Confidence 44444444556788888999999 999999988 588999999863
No 113
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=86.67 E-value=0.42 Score=47.05 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=30.9
Q ss_pred HHHhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 457 RLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 457 ~~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
....++|.-...||.|+ ||.||+|.- .|..||||++.
T Consensus 30 ~~~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~ 68 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGT-YGEVYKAIDTVTNETVAIKRIR 68 (329)
T ss_dssp --CGGGEEEEEEEEECS-SSEEEEEEETTTTEEEEEEECC
T ss_pred ccchhhEEEEEEEEecC-CeEEEEEEECCCCceEEEEEEc
Confidence 34557788889999999 999999986 58899999996
No 114
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=86.67 E-value=0.46 Score=47.85 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=24.1
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.....||.|+ ||.||+|.. .|..||||++..
T Consensus 24 ~~~y~~~~~lG~G~-~g~V~~a~~~~~~~~vaiK~~~~ 60 (367)
T 1cm8_A 24 RAVYRDLQPVGSGA-YGAVCSAVDGRTGAKVAIKKLYR 60 (367)
T ss_dssp BSSEEEEEEC-------CEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEeEEeeecC-CeEEEEEEECCCCCEEEEEEeCc
Confidence 45677778999999 999999987 489999999963
No 115
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=86.56 E-value=0.5 Score=45.59 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..|.....||.|+ ||.||+|.. .|..||||.+..
T Consensus 22 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~ 57 (303)
T 3a7i_A 22 ELFTKLEKIGKGS-FGEVFKGIDNRTQKVVAIKIIDL 57 (303)
T ss_dssp GTEEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEET
T ss_pred HHHHHhhhhcccC-CeEEEEEEECCCCcEEEEEEecc
Confidence 4577778999999 999999987 488999999963
No 116
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=86.56 E-value=0.25 Score=50.06 Aligned_cols=34 Identities=35% Similarity=0.393 Sum_probs=27.6
Q ss_pred hccccccccccCCCcceEEEEEEC-----CcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN-----HASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~-----g~~VAVK~L~~ 495 (505)
++|.....||.|+ ||.||+|... +..||||.+..
T Consensus 45 ~~~~~~~~lG~G~-fg~Vy~~~~~~~~~~~~~vaiK~~~~ 83 (373)
T 2qol_A 45 TNISIDKVVGAGE-FGEVCSGRLKLPSKKEISVAIKTLKV 83 (373)
T ss_dssp GGCCCCEEEEECS-SSEEEEC-CBCTTSCBCCEEEEECCT
T ss_pred hhceeeeEEeeCC-CeEEEEEEEecCCCCceeEEEEEecC
Confidence 4577778999999 9999999863 56899999974
No 117
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=86.51 E-value=0.33 Score=47.05 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=28.5
Q ss_pred HHhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 458 ~AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
...++|.-...||.|+ ||.||+|.. +|..||||.+..
T Consensus 28 ~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vavK~~~~ 66 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGG-FGTVFAGHRLTDRLQVAIKVIPR 66 (312)
T ss_dssp -----CEEEEEEEEET-TEEEEEEECTTTCCEEEEEECCS
T ss_pred hhhhceEEeeEEEcCC-CEEEEEEEEccCCeEEEEEEEec
Confidence 3456788888999999 999999987 578999999963
No 118
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=86.42 E-value=0.42 Score=47.82 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=29.2
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
+.|.-..+||.|+ ||.||+|.- .|..||||++..
T Consensus 37 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~ 72 (397)
T 1wak_A 37 GRYHVIRKLGWGH-FSTVWLSWDIQGKKFVAMKVVKS 72 (397)
T ss_dssp TTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECS
T ss_pred CeEEEEEEeeecC-CeeEEEEEecCCCeEEEEEEEec
Confidence 5577778999999 999999986 478999999964
No 119
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=86.39 E-value=0.37 Score=49.01 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=28.9
Q ss_pred hccccccccccCCCcceEEEEEE-CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~~ 495 (505)
..|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 56 ~~y~~~~~LG~G~-fg~Vy~~~~~~~~~vaiK~~~~ 90 (390)
T 2zmd_A 56 RIYSILKQIGSGG-SSKVFQVLNEKKQIYAIKYVNL 90 (390)
T ss_dssp EEEEEEEEEECCS-SEEEEEEECTTCCEEEEEEEEC
T ss_pred CceEEEEEEccCC-CeEEEEEEcCCCCEEEEEEEec
Confidence 3477778999999 999999987 588999999863
No 120
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=86.19 E-value=0.43 Score=47.91 Aligned_cols=35 Identities=11% Similarity=0.093 Sum_probs=29.6
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.-...||.|+ ||.||++.- .|..||||++..
T Consensus 19 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 55 (361)
T 3uc3_A 19 SDRYDFVKDIGSGN-FGVARLMRDKLTKELVAVKYIER 55 (361)
T ss_dssp TTTEEEEEEESSST-TSSEEEEEETTTCCEEEEEEEES
T ss_pred CCcEEEEEEeccCC-CEEEEEEEECCCCcEEEEEEEec
Confidence 34567778999999 999999988 488999999974
No 121
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=86.16 E-value=0.42 Score=46.23 Aligned_cols=35 Identities=14% Similarity=0.257 Sum_probs=24.4
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.....||.|+ ||.||+|.. +|..||||.+..
T Consensus 24 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~ 60 (318)
T 2dyl_A 24 INDLENLGEMGSGT-CGQVWKMRFRKTGHVIAVKQMRR 60 (318)
T ss_dssp GGGEEEEEEC-------CEEEEEETTTCCEEEEEEEET
T ss_pred hccccccceeeecC-CeeEEEEEEecCCeEEEEEEecc
Confidence 46677778999999 999999998 488999999964
No 122
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=86.15 E-value=0.38 Score=46.51 Aligned_cols=44 Identities=18% Similarity=0.236 Sum_probs=33.5
Q ss_pred cHHHHHHHhhccccccccccCCCcceEEEEEE-------CCcEEEEEEccCC
Q 010658 452 AAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNG 496 (505)
Q Consensus 452 s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L-------~g~~VAVK~L~~~ 496 (505)
.........++|.-...||.|+ ||.||+|.. .+..||||.+...
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~ 68 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGA-FGQVIEADAFGIDKTATCRTVAVKMLKEG 68 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECS-SEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred cccceecchhheeeeeEEcCCC-ceeEEEEEEecCCccccceEEEEEecccC
Confidence 3334444567788888999999 999999984 2478999999743
No 123
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=86.13 E-value=0.42 Score=47.08 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=30.2
Q ss_pred hhccccccccccCCCcceEEEEEECCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|..+|..||||.+.
T Consensus 30 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~vavK~~~ 63 (348)
T 2pml_X 30 INDYRIIRTLNQGK-FNKIILCEKDNKFYALKKYE 63 (348)
T ss_dssp ETTEEEEEEEECCS-SCCEEEEEETTEEEEEEEEE
T ss_pred cCceEEEEEEcCCC-CeEEEEEEcCCceEEEEEee
Confidence 35677778999999 99999999999999999986
No 124
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=86.10 E-value=0.45 Score=48.87 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-..+||.|+ ||.||++.. .|..||||++.
T Consensus 51 ~~~y~~~~~LG~G~-fG~V~~~~~~~~~~~~AvK~~~ 86 (396)
T 4dc2_A 51 LQDFDLLRVIGRGS-YAKVLLVRLKKTDRIYAMRVVK 86 (396)
T ss_dssp GGGEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEE
T ss_pred hhHcEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEEE
Confidence 35677788999999 999999998 47899999986
No 125
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=86.07 E-value=0.41 Score=47.41 Aligned_cols=35 Identities=20% Similarity=0.124 Sum_probs=28.7
Q ss_pred hhcccc-ccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSE-RFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~-~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
+++|.- ..+||.|+ ||.||+|.. .|..||||.+..
T Consensus 27 ~~~y~i~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 64 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGV-NGKVLECFHRRTGQKCALKLLYD 64 (336)
T ss_dssp GGTEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEES
T ss_pred cceeEecceeeeeCC-CeEEEEEEECCCCCEEEEEEecC
Confidence 456666 45799999 999999998 489999999853
No 126
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=86.05 E-value=0.52 Score=45.26 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=29.0
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 18 ~~~y~i~~~lg~G~-~g~V~~~~~~~~~~~~aiK~~~~ 54 (302)
T 2j7t_A 18 NEVWEIVGELGDGA-FGKVYKAKNKETGALAAAKVIET 54 (302)
T ss_dssp GGTEEEEEEEECST-TCCEEEEEETTTCCEEEEEEEC-
T ss_pred ccceeecceeccCC-CeEEEEEEEcCCCcEEEEEEecC
Confidence 35567777899999 999999998 378999999863
No 127
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=85.94 E-value=0.54 Score=46.17 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
+.|.....||.|+ ||.||+|.. .|..||||++..
T Consensus 25 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~ 60 (331)
T 4aaa_A 25 EKYENLGLVGEGS-YGMVMKCRNKDTGRIVAIKKFLE 60 (331)
T ss_dssp GGEEEEEEGGGGT-TSSEEEEEETTTCCEEEEEEEES
T ss_pred hhheeeeEEeecC-CEEEEEEEECCCCceEEEEEEec
Confidence 4566778999999 999999998 388999999863
No 128
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=85.89 E-value=0.38 Score=48.39 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=29.4
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|.. .|..||||++.
T Consensus 22 ~~~y~~~~~lG~G~-fg~V~~~~~~~~~~~~AvK~~~ 57 (353)
T 3txo_A 22 IDNFEFIRVLGKGS-FGKVMLARVKETGDLYAVKVLK 57 (353)
T ss_dssp -CCEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred hhheEEEEEEeeCC-CEEEEEEEEcCCCCEEEEEEEE
Confidence 46788888999999 999999998 47899999985
No 129
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=85.85 E-value=0.47 Score=46.54 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=30.7
Q ss_pred HhhccccccccccCCCcceEEEEEECC-------cEEEEEEccCC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLNH-------ASVAIKTLNNG 496 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~g-------~~VAVK~L~~~ 496 (505)
..++|.-...||.|+ ||.||+|...+ ..||||.+...
T Consensus 45 ~~~~~~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~ 88 (343)
T 1luf_A 45 PRNNIEYVRDIGEGA-FGRVFQARAPGLLPYEPFTMVAVKMLKEE 88 (343)
T ss_dssp CGGGCEEEEEEEECS-SCEEEEEEEETSSTTSSEEEEEEEECCTT
T ss_pred cHHHCeeeeeeeecC-CeeEEEEEecCcCCCCCceeEEEEEeccc
Confidence 456787788999999 99999999743 78999999743
No 130
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=85.82 E-value=14 Score=39.27 Aligned_cols=26 Identities=15% Similarity=0.005 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhH
Q 010658 394 AEAQLEKAVIARAEIVKDIEELRRQR 419 (505)
Q Consensus 394 ~e~~l~~~~~~~~~~~~~~~~l~~~r 419 (505)
++.+...-.....++++...+++++-
T Consensus 542 ~~~~~~~le~~~~~~~~~~~~l~~e~ 567 (597)
T 3oja_B 542 LEQENIALEKQLDNKRAKQAELRQET 567 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHhhhhhHHHHHHHHH
Confidence 33333333333333333333333333
No 131
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=85.77 E-value=0.46 Score=49.07 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 97 ~ry~~~~~LG~G~-fg~V~~a~~~~~~~~vAvK~~~~ 132 (429)
T 3kvw_A 97 YRYEVLKVIGKGS-FGQVVKAYDHKVHQHVALKMVRN 132 (429)
T ss_dssp TTEEEEEEEEESS-SEEEEEEEETTTTEEEEEEEECS
T ss_pred CcEEEEEEcccCc-cEEEEEEEECCCCcEEEEEEECC
Confidence 4567778999999 999999987 478999999964
No 132
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=85.76 E-value=16 Score=31.28 Aligned_cols=87 Identities=17% Similarity=0.270 Sum_probs=41.9
Q ss_pred HhhhhHHHHHhHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 331 LESLTKEDVASRMEIQRDLDSLKEQSCEV-------IRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVI 403 (505)
Q Consensus 331 ~e~~~~~e~~~R~e~ee~l~~eke~~e~~-------~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~ 403 (505)
++..+..+-..|+++++....--++...+ +..+.++-+++..+..++.+|+.++.+....+.+.+........
T Consensus 25 lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee~~~~L~~ 104 (129)
T 2fxo_A 25 LKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTA 104 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444455666554433333332222 22233344444555566666666666666666665555554444
Q ss_pred HHHHHHHHHHHHHH
Q 010658 404 ARAEIVKDIEELRR 417 (505)
Q Consensus 404 ~~~~~~~~~~~l~~ 417 (505)
....+..++..|++
T Consensus 105 ~kkkle~e~~~Lk~ 118 (129)
T 2fxo_A 105 KKRKLEDECSELKR 118 (129)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444433
No 133
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=85.73 E-value=0.54 Score=48.28 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=29.9
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
..+.|.-...||.|+ ||.||+|.. .|..||||.+.
T Consensus 133 ~~~~y~~~~~LG~G~-~g~V~~a~~~~~~~~vavK~~~ 169 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGA-CGEVKLAFERKTCKKVAIRIIS 169 (419)
T ss_dssp HHTTEEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEE
T ss_pred hhccEEEEeEEeeCC-CeEEEEEEECCCCcEEEEEEEE
Confidence 356677788999999 999999988 47899999985
No 134
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=85.73 E-value=0.29 Score=47.65 Aligned_cols=44 Identities=30% Similarity=0.441 Sum_probs=34.3
Q ss_pred ccHHHHHHHhhccccccccccCCCcceEEEEEEC-------CcEEEEEEccC
Q 010658 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNN 495 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG~gg~~G~VYkg~L~-------g~~VAVK~L~~ 495 (505)
+...+.....++|.-...||.|+ ||.||+|... +..||||.+..
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~~vaiK~~~~ 65 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGS-FGMVYEGVAKGVVKDEPETRVAIKTVNE 65 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECS-SSEEEEEEEEEEETTEEEEEEEEEECCT
T ss_pred cChhhhcchhhheeeeeEeccCC-ceEEEeeeecCccCCCCceEEEEEeccc
Confidence 33444455667888889999999 9999999753 57899999974
No 135
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=85.69 E-value=0.58 Score=44.71 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=25.3
Q ss_pred cccccccCCCcceEEEEEE--CCcE--EEEEEcc
Q 010658 465 ERFRLKCAGDWTNVYRGRL--NHAS--VAIKTLN 494 (505)
Q Consensus 465 ~~~~iG~gg~~G~VYkg~L--~g~~--VAVK~L~ 494 (505)
-...||.|+ ||.||+|.. +|.. ||||.+.
T Consensus 51 i~~~ig~G~-~g~Vy~a~~~~~g~~~~vAvK~~~ 83 (258)
T 1zth_A 51 MGGVISTGK-EANVFYADGVFDGKPVAMAVKIYR 83 (258)
T ss_dssp EEEEEEECS-SEEEEEEEEEETTEEEEEEEEEEC
T ss_pred hCCEEeecc-eEEEEEEEEcCCCcEeeEEEEEEE
Confidence 346899999 999999998 6888 9999875
No 136
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=85.61 E-value=0.46 Score=47.94 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=25.9
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.....||.|+ ||.||+|.- .|..||||++..
T Consensus 28 ~~~y~~~~~lG~G~-~g~V~~a~~~~~~~~vaiK~~~~ 64 (367)
T 2fst_X 28 PERYQNLSPVGSGA-YGSVCAAFDTKTGLRVAVKKLSR 64 (367)
T ss_dssp ETTEEEEEECC-----CCEEEEEETTTTEEEEEEECSS
T ss_pred CCceEEeeEEeecC-CeEEEEEEECCCCCEEEEEEeCc
Confidence 35677778999999 999999986 588999999964
No 137
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=85.55 E-value=0.45 Score=49.21 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|.- .|..||||.+.
T Consensus 147 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~ 182 (446)
T 4ejn_A 147 MNEFEYLKLLGKGT-FGKVILVKEKATGRYYAMKILK 182 (446)
T ss_dssp GGGEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred hHHcEEeEEEeeCc-CEEEEEEEEcCCCCEEEEEEEE
Confidence 35677788999999 999999987 48899999985
No 138
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=85.27 E-value=0.44 Score=47.65 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=29.0
Q ss_pred HhhccccccccccCCCcceEEEEEEC-------CcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~-------g~~VAVK~L~~ 495 (505)
.+++|.-...||.|+ ||.||+|... +..||||.+..
T Consensus 33 ~~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~ 75 (364)
T 3op5_A 33 AAAAWKVGLPIGQGG-FGCIYLADMNSSESVGSDAPCVVKVEPS 75 (364)
T ss_dssp TCCEEEEEEECCCC--CCEEEEEEECCSSCCCTTCSEEEEEEET
T ss_pred CCCeEEEEEEEecCC-CeEEEEeeecCccccccccceEEEEeec
Confidence 356788888999999 9999999883 36899999864
No 139
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=85.27 E-value=9.3 Score=32.88 Aligned_cols=74 Identities=19% Similarity=0.203 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 347 RDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLST-----------MAKGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 347 e~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-----------~~~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
+.|...|.++-++++.+..+..+|+.+..++..|+..+.+.. ..+.++|.+|..+-...+...+++..|
T Consensus 31 ~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~L 110 (131)
T 3tnu_A 31 ELVQSGKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKIL 110 (131)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666666666666666666666666554433 344455555555555555555555555
Q ss_pred HHhHh
Q 010658 416 RRQRD 420 (505)
Q Consensus 416 ~~~r~ 420 (505)
...+-
T Consensus 111 l~vKl 115 (131)
T 3tnu_A 111 LDVKT 115 (131)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 140
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=85.26 E-value=0.56 Score=47.57 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=29.6
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||++.. .|..||||.+.
T Consensus 37 ~~~y~~~~~lG~G~-fg~V~~~~~~~~~~~~AiK~~~ 72 (373)
T 2r5t_A 37 PSDFHFLKVIGKGS-FGKVLLARHKAEEVFYAVKVLQ 72 (373)
T ss_dssp GGGEEEEEEEECCT-TCEEEEEEETTTCCEEEEEEEE
T ss_pred hhheEEEEEEeeCC-CeEEEEEEEcCCCCEEEEEEEE
Confidence 35688888999999 999999998 47899999985
No 141
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=85.24 E-value=0.56 Score=47.16 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=27.9
Q ss_pred hccccccccccCCCcceEEEEEEC-------CcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~-------g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|... +..||||++..
T Consensus 71 ~~~~~~~~LG~G~-fg~Vy~~~~~~~~~~~~~~~vavK~~~~ 111 (367)
T 3l9p_A 71 KNITLIRGLGHGA-FGEVYEGQVSGMPNDPSPLQVAVKTLPE 111 (367)
T ss_dssp GGEEEEEECCCCS-SSCEEEEEECC-----CCEEEEEEECCS
T ss_pred hHeEEeeEeeeCC-CEEEEEEEEccCCCCCcceeEEEEeccc
Confidence 4566677899999 9999999953 45899999964
No 142
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=85.18 E-value=0.53 Score=45.14 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=30.1
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.....||.|+ ||.||+|.. .|..||||.+..
T Consensus 16 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~~ 52 (298)
T 1phk_A 16 YENYEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDV 52 (298)
T ss_dssp TTTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEET
T ss_pred hhccceeeeecCCC-ceEEEEEEEcCcCceEEEEEEec
Confidence 45677788999999 999999998 478999999963
No 143
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=85.14 E-value=0.54 Score=45.71 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
..+|.-...||.|+ ||.||+|.. .|..||||++.
T Consensus 27 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~ 62 (337)
T 3ll6_A 27 ELRLRVRRVLAEGG-FAFVYEAQDVGSGREYALKRLL 62 (337)
T ss_dssp TEEEEEEEEEECCS-SEEEEEEEETTTCCEEEEEEEE
T ss_pred CceEEEEEEEccCC-ceEEEEEEECCCCcEEEEEEec
Confidence 45677788999999 999999997 58899999985
No 144
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=85.12 E-value=0.68 Score=46.61 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=27.8
Q ss_pred hccccccccccCCCcceEEEEEEC---------CcEEEEEEccCC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN---------HASVAIKTLNNG 496 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~---------g~~VAVK~L~~~ 496 (505)
++|.-...||.|+ ||.||+|... +..||||.+...
T Consensus 81 ~~~~~~~~LG~G~-fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~ 124 (370)
T 2psq_A 81 DKLTLGKPLGEGC-FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 124 (370)
T ss_dssp GGEEEEEEESCCS-SSEEEEEEEETCSTTCTTCEEEEEEEECCTT
T ss_pred HHCEeeeEEeeCC-CeeEEEEEEecccCcCcCcceeEEEEEecCC
Confidence 4566677999999 9999999851 347999999743
No 145
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=84.97 E-value=0.44 Score=49.33 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=21.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 52 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~i~~ 88 (458)
T 3rp9_A 52 PDRYEIRHLIGTGS-YGHVCEAYDKLEKRVVAIKKILR 88 (458)
T ss_dssp CTTEEECCC--------CEEEEEECC--CEEEEEEECS
T ss_pred CCCeEEeeEeeecC-CeEEEEEEECCCCcEEEEEEech
Confidence 35677788999999 999999986 488999999863
No 146
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=84.90 E-value=0.56 Score=44.92 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=25.0
Q ss_pred ccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 464 s~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.-...||.|+ ||.||+|.. .+..||||.+.
T Consensus 29 ~~~~~lg~G~-~g~Vy~~~~~~~~~~va~k~~~ 60 (290)
T 1t4h_A 29 KFDIEIGRGS-FKTVYKGLDTETTVEVAWCELQ 60 (290)
T ss_dssp EEEEEEEECS-SEEEEEEEETTTCCEEEEEEEE
T ss_pred EeeeeccCCC-CeEEEEeEecCCceEEEEEEec
Confidence 3345799999 999999988 46789999986
No 147
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=84.73 E-value=0.57 Score=46.80 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=30.6
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..+.|.....||.|+ ||.||+|.- .|..||||++..
T Consensus 25 ~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vaiK~~~~ 62 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGA-YGMVCSAYDNLNKVRVAIKKISP 62 (364)
T ss_dssp CTTTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECC
T ss_pred ccccEEEEEEeecCC-CeEEEEEEECCCCeEEEEEEecc
Confidence 355677888999999 999999986 478999999964
No 148
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=84.65 E-value=0.75 Score=45.18 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=28.7
Q ss_pred hhccccccccccCCCcceEEEEEEC---------CcEEEEEEccCC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN---------HASVAIKTLNNG 496 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~---------g~~VAVK~L~~~ 496 (505)
.++|.-...||.|+ ||.||+|... +..||||.+...
T Consensus 34 ~~~y~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~ 78 (334)
T 2pvf_A 34 RDKLTLGKPLGEGA-FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78 (334)
T ss_dssp GGGEEEEEEEEECS-SCEEEEEEETTCSTTCC---CEEEEEECCTT
T ss_pred HhHeEEeeEEeecC-ceeEEEeEeccccccccccceEEEEeeeccC
Confidence 35677778999999 9999999862 468999999743
No 149
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=84.62 E-value=0.7 Score=44.50 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=29.3
Q ss_pred hhccccccccccCCCcceEEEEEE-------CCcEEEEEEccCC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNG 496 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L-------~g~~VAVK~L~~~ 496 (505)
.++|.-...||.|+ ||.||+|.. .+..||||.+...
T Consensus 22 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~~~~~vavK~~~~~ 64 (313)
T 1t46_A 22 RNRLSFGKTLGAGA-FGKVVEATAYGLIKSDAAMTVAVKMLKPS 64 (313)
T ss_dssp GGGEEEEEEEEECS-SEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred hhhhhHHHhhCccC-CcceEEEEEeeccccchhhhhHHHhcCcc
Confidence 35677778999999 999999985 2478999999743
No 150
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=84.51 E-value=0.62 Score=45.61 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=27.9
Q ss_pred hccccccccccCCCcceEEEEEE------CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL------NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L------~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 41 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~~~~vavK~~~~ 80 (326)
T 2w1i_A 41 RHLKFLQQLGKGN-FGSVEMCRYDPLQDNTGEVVAVKKLQH 80 (326)
T ss_dssp GGEEEEEEEECCS-SEEEEEEEECTTSSSCCEEEEEEEESS
T ss_pred HHceeeeeeccCC-CeEEEEEEeccccCCCceEEEEEEecc
Confidence 3455567899999 999999984 478999999974
No 151
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=84.35 E-value=0.5 Score=46.25 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=28.2
Q ss_pred hccccccccccCCCcceEEEEEE------CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL------NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L------~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 23 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~~~~vavK~~~~ 62 (327)
T 3lxl_A 23 RHLKYISQLGKGN-FGSVELCRYDPLGDNTGALVAVKQLQH 62 (327)
T ss_dssp GGEEEEEEEEEET-TEEEEEEEECTTSSSCSEEEEEEEESS
T ss_pred hhhhhhhhccCCC-CeEEEEEEeccCCCCcceEEEEEEecc
Confidence 4566677999999 999999984 468999999964
No 152
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=84.30 E-value=0.58 Score=46.72 Aligned_cols=35 Identities=11% Similarity=0.237 Sum_probs=29.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 21 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~avK~~~~ 57 (342)
T 2qr7_A 21 TDGYEVKEDIGVGS-YSVCKRCIHKATNMEFAVKIIDK 57 (342)
T ss_dssp HHHEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEET
T ss_pred cccEEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEEc
Confidence 45677778999999 999999998 478999999964
No 153
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=84.28 E-value=0.5 Score=46.45 Aligned_cols=28 Identities=18% Similarity=0.026 Sum_probs=24.9
Q ss_pred cccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 467 ~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..||.|+ ||.||+|.. .|..||||.+..
T Consensus 35 ~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 64 (327)
T 3lm5_A 35 KELGRGK-FAVVRQCISKSTGQEYAAKFLKK 64 (327)
T ss_dssp EEEEEET-TEEEEEEEETTTCCEEEEEEEES
T ss_pred ceeCCCC-CeEEEEEEECCCCCEEEEEEEeh
Confidence 6899999 999999988 489999999863
No 154
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=84.21 E-value=0.57 Score=46.16 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=28.9
Q ss_pred hccccccccccCCCcceEEEEEE-----CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL-----NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L-----~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||++.. .|..||||.+..
T Consensus 17 ~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~~~~aiK~~~~ 55 (327)
T 3a62_A 17 ECFELLRVLGKGG-YGKVFQVRKVTGANTGKIFAMKVLKK 55 (327)
T ss_dssp GGEEEEEEEEEET-TEEEEEEEECSSTTTTCEEEEEEECC
T ss_pred HHeEEEEEEEeCC-CEEEEEEEEeccCCCCcEEEEEEEEH
Confidence 4677788999999 999999986 478999999863
No 155
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=84.18 E-value=22 Score=31.57 Aligned_cols=17 Identities=24% Similarity=0.132 Sum_probs=8.1
Q ss_pred HHHHHHHhhhhHHHHhh
Q 010658 317 AKWAICLCNSRADQLES 333 (505)
Q Consensus 317 ae~~~~~~~~~~~~~e~ 333 (505)
.+.++--|-.|+..+|.
T Consensus 26 ~E~dLEraEERae~aE~ 42 (155)
T 2efr_A 26 LKKLLERAEERAELSEG 42 (155)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444445555544
No 156
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=84.07 E-value=0.92 Score=44.24 Aligned_cols=33 Identities=18% Similarity=0.081 Sum_probs=27.0
Q ss_pred cccccccccCCCcceEEEEEE------CCcEEEEEEccCC
Q 010658 463 FSERFRLKCAGDWTNVYRGRL------NHASVAIKTLNNG 496 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L------~g~~VAVK~L~~~ 496 (505)
|.....||.|+ ||.||+|.. .|..||||++...
T Consensus 33 ~~~~~~lG~G~-~g~V~~~~~~~~~~~~~~~vavK~~~~~ 71 (318)
T 3lxp_A 33 LKKIRDLGEGH-FGKVSLYCYDPTNDGTGEMVAVKALKAD 71 (318)
T ss_dssp EEEEEEEEECS-SEEEEEEEECSCC--CCEEEEEEEECTT
T ss_pred HhhhheecCCC-CeEEEEEEEccCCCCCCcEEEEEEeccc
Confidence 45667899999 999999875 3678999999753
No 157
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=84.06 E-value=0.69 Score=46.34 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=28.9
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
++|.-...||.|+ ||.||++.. .|..||||.+.
T Consensus 41 ~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~ 75 (350)
T 1rdq_E 41 DQFDRIKTLGTGS-FGRVMLVKHKESGNHYAMKILD 75 (350)
T ss_dssp GGEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEE
T ss_pred HHCEEEEEeecCc-CcEEEEEEECCCCCEEEEEEEE
Confidence 5677778999999 999999998 48899999985
No 158
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=84.02 E-value=0.52 Score=45.27 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=26.9
Q ss_pred hccccccccccCCCcceEEEEEECCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|...+ .||||.+..
T Consensus 24 ~~y~~~~~lG~G~-~g~Vy~~~~~~-~vavK~~~~ 56 (289)
T 3og7_A 24 GQITVGQRIGSGS-FGTVYKGKWHG-DVAVKMLNV 56 (289)
T ss_dssp TSCEEEEEEEECS-SEEEEEEESSS-EEEEEEESC
T ss_pred cceeeeeEecCCC-CeEEEEEEEcC-ceEEEEEec
Confidence 3466667999999 99999998754 599999863
No 159
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=84.02 E-value=0.42 Score=49.56 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=29.7
Q ss_pred HhhccccccccccCCCcce-EEEEEECCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTN-VYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~-VYkg~L~g~~VAVK~L~~ 495 (505)
....|....+||.|+ ||+ ||++..+|..||||++..
T Consensus 22 ~~~~y~~~~~LG~G~-~G~V~~~~~~~~~~vAvK~~~~ 58 (432)
T 3p23_A 22 GKISFCPKDVLGHGA-EGTIVYRGMFDNRDVAVKRILP 58 (432)
T ss_dssp TTEEEEEEEEEEECG-GGCEEEEEESSSSEEEEEEECT
T ss_pred ccEEEecCCeeecCc-CEEEEEEEEeCCeEEEEEEECH
Confidence 345688888999999 998 566777899999999964
No 160
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=83.90 E-value=0.67 Score=46.73 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=28.6
Q ss_pred hhccccccccccCCCcceEEEEEEC---------CcEEEEEEccCC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN---------HASVAIKTLNNG 496 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~---------g~~VAVK~L~~~ 496 (505)
.+.|.-...||.|+ ||.||+|... +..||||++...
T Consensus 68 ~~~y~i~~~LG~G~-~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~ 112 (382)
T 3tt0_A 68 RDRLVLGKPLGEGA-FGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 112 (382)
T ss_dssp GGGEEEEEEEEECS-SEEEEEEEEETSSTTCTTCEEEEEEEEECTT
T ss_pred hhheEeeeEEecCC-CeEEEEEEEccccccccccceEEEEEeeccc
Confidence 35677778999999 9999999852 257999999754
No 161
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=83.89 E-value=0.54 Score=48.46 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=30.3
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|.. .|..||||++..
T Consensus 25 ~~~y~~~~~lG~G~-~g~V~~a~~~~~~~~vAiK~~~~ 61 (432)
T 3n9x_A 25 PDNYIIKHLIGRGS-YGYVYLAYDKNTEKNVAIKKVNR 61 (432)
T ss_dssp CTTEEEEEEEEEET-TEEEEEEEETTTTEEEEEEEECS
T ss_pred cCCEEEEEEEeecC-CEEEEEEEECCCCcEEEEEEeCc
Confidence 45788888999999 999999987 478999999964
No 162
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=83.86 E-value=0.67 Score=49.81 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=29.2
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
++|.....||.|+ ||.||+|.. .|..||||++.
T Consensus 185 ~~f~~~~~LG~G~-fG~Vy~a~~~~tg~~vAiK~l~ 219 (543)
T 3c4z_A 185 DWFLDFRVLGRGG-FGEVFACQMKATGKLYACKKLN 219 (543)
T ss_dssp GGEEEEEEEEECS-SSEEEEEEETTTCCEEEEEEEE
T ss_pred hheEEEEEEeeCC-CeEEEEEEECCCCcEEEEEEEE
Confidence 5677778999999 999999998 48999999995
No 163
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=83.81 E-value=0.39 Score=48.34 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEEC--CcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~--g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|... |..||||.+.
T Consensus 19 ~~~y~~~~~lG~G~-fg~V~~~~~~~~~~~~AiK~~~ 54 (353)
T 2i0e_A 19 LTDFNFLMVLGKGS-FGKVMLSERKGTDELYAVKILK 54 (353)
T ss_dssp CTTEEEEEEEEEET-TEEEEEEEETTEEEEEEEEEEE
T ss_pred hHHcEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEE
Confidence 46688888999999 9999999984 6789999985
No 164
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=83.72 E-value=0.72 Score=44.25 Aligned_cols=33 Identities=21% Similarity=0.127 Sum_probs=27.3
Q ss_pred ccccccccccCCCcceEEEEEE------CCcEEEEEEccC
Q 010658 462 DFSERFRLKCAGDWTNVYRGRL------NHASVAIKTLNN 495 (505)
Q Consensus 462 ~Fs~~~~iG~gg~~G~VYkg~L------~g~~VAVK~L~~ 495 (505)
.|.....||.|+ ||.||+|.. .|..||||.+..
T Consensus 22 ~~~~~~~lg~G~-~g~V~~~~~~~~~~~~~~~vavK~~~~ 60 (302)
T 4e5w_A 22 FLKRIRDLGEGH-FGKVELCRYDPEGDNTGEQVAVKSLKP 60 (302)
T ss_dssp GEEEEEEEEECS-SEEEEEEEECTTSSSCSEEEEEEEEC-
T ss_pred hhhhhhccCCCC-ceEEEEEEEccccCccCeEEEEEEecc
Confidence 366677999999 999999984 478999999974
No 165
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=83.72 E-value=0.66 Score=46.01 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|.- .|..||||.+..
T Consensus 19 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~ 54 (373)
T 1q8y_A 19 ARYILVRKLGWGH-FSTVWLAKDMVNNTHVAMKIVRG 54 (373)
T ss_dssp TTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEECS
T ss_pred CeEEEEEeeeecC-CeEEEEEEecCCCcEEEEEEecC
Confidence 4566677999999 999999986 588999999863
No 166
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=83.65 E-value=0.42 Score=46.19 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=28.9
Q ss_pred hhccccccccccCCCcceEEEEEE-------CCcEEEEEEccCC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNG 496 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L-------~g~~VAVK~L~~~ 496 (505)
.++|.-...||.|+ ||.||+|.. .|..||||.+...
T Consensus 22 ~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~~~~~vavK~~~~~ 64 (314)
T 2ivs_A 22 RKNLVLGKTLGEGE-FGKVVKATAFHLKGRAGYTTVAVKMLKEN 64 (314)
T ss_dssp GGGEEEEEEEEECS-SSEEEEEEEETGGGCSSEEEEEEEECCTT
T ss_pred hhheeeeeeecccC-CeeEEEEEEeccCcccCcceEEEEeccCC
Confidence 45677778899999 999999985 2378999999743
No 167
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=83.57 E-value=0.65 Score=45.64 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=29.4
Q ss_pred HhhccccccccccCCCcceEEEEEE-------CCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L-------~g~~VAVK~L~~ 495 (505)
..++|.-...||.|+ ||.||+|.. .+..||||.+..
T Consensus 43 ~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~~~~~vavK~~~~ 85 (344)
T 1rjb_A 43 PRENLEFGKVLGSGA-FGKVMNATAYGISKTGVSIQVAVKMLKE 85 (344)
T ss_dssp CGGGEEEEEEEEECS-SEEEEEEEEESCSSSSCEEEEEEEEECC
T ss_pred CHHHceeeeeecCCC-CceeEEeeeeccccCCcceEEEEEeccc
Confidence 346777788999999 999999986 245899999963
No 168
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=83.54 E-value=0.72 Score=45.77 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=28.7
Q ss_pred hccccccccccCCCcceEEEEEEC--CcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~--g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|... |..||||.+..
T Consensus 33 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~va~K~~~~ 68 (360)
T 3eqc_A 33 DDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHL 68 (360)
T ss_dssp GGEEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEC
T ss_pred ccceeeeeecCCC-CeEEEEEEECCCCcEEEEEEecc
Confidence 3466677999999 9999999984 88999999864
No 169
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=83.52 E-value=0.65 Score=44.99 Aligned_cols=33 Identities=15% Similarity=0.046 Sum_probs=26.9
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
++|.-...||.|+ ||.||++.- .|..||||++.
T Consensus 29 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~vavK~~~ 63 (317)
T 2buj_A 29 KHYLFIQKLGEGG-FSYVDLVEGLHDGHFYALKRIL 63 (317)
T ss_dssp EEEEEEEEEEC---CEEEEEEEETTTCCEEEEEEEE
T ss_pred eEEEEEEEecCCC-CeEEEEEEecCCCcEEEEEEEe
Confidence 5677788999999 999999996 58999999885
No 170
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=83.27 E-value=0.68 Score=46.16 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=28.5
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
+.|.-...||.|+ ||.||+|.- .|..||||.+.
T Consensus 24 ~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~ 58 (351)
T 3c0i_A 24 DVYELCEVIGKGP-FSVVRRCINRETGQQFAVKIVD 58 (351)
T ss_dssp HHEEEEEEEEECS-SEEEEEEEETTTCCEEEEEEEE
T ss_pred cceEEeeEEeeCC-CEEEEEEEECCCCCEEEEEEEE
Confidence 4577778999999 999999987 48999999985
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=83.07 E-value=0.66 Score=48.51 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=29.6
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.....||.|+ ||.||+|.- .|..||||++..
T Consensus 61 ~~~y~~~~~lG~G~-~g~V~~a~~~~~~~~vAiK~~~~ 97 (464)
T 3ttj_A 61 LKRYQNLKPIGSGA-QGIVCAAYDAVLDRNVAIKKLSR 97 (464)
T ss_dssp ETTEEEEEEEEECS-SCEEEEEEETTTTEEEEEEEEES
T ss_pred cCCeEEEEEeecCC-CeEEEEEEECCCCCEEEEEEECc
Confidence 45677778999999 999999986 488999999963
No 172
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=82.95 E-value=0.75 Score=44.70 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=29.4
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 33 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~vaiK~~~~ 69 (309)
T 2h34_A 33 FGPYRLRRLVGRGG-MGDVYEAEDTVRERIVALKLMSE 69 (309)
T ss_dssp -CCEEEEEEEEECS-SSEEEEEEETTTTEEEEEEECGG
T ss_pred eccEEEEEEEcCCC-CeeEEEEEEcCCCeEEEEEecCc
Confidence 35677788999999 999999997 488999999863
No 173
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=82.89 E-value=0.62 Score=46.81 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=30.8
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
..++|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 27 ~~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~avK~~~~ 64 (362)
T 2bdw_A 27 FSDNYDVKEELGKGA-FSVVRRCVHKTTGLEFAAKIINT 64 (362)
T ss_dssp HHHHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEET
T ss_pred cccCeEEeeEEecCC-CeEEEEEEECCCCCEEEEEEEEc
Confidence 346788788999999 999999987 488999999964
No 174
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=82.84 E-value=0.79 Score=47.33 Aligned_cols=31 Identities=10% Similarity=0.011 Sum_probs=26.3
Q ss_pred cccccccccCCCcceEEEEEE-CCcEEEEEEcc
Q 010658 463 FSERFRLKCAGDWTNVYRGRL-NHASVAIKTLN 494 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~ 494 (505)
+.-...||.|+ +|.||+|.- +|..||||.+.
T Consensus 97 Y~I~~~IG~Gk-~a~VY~a~d~~G~~vAvKi~r 128 (397)
T 4gyi_A 97 YSVGSRIGVGK-ESDIMIVADEKGKQKVLKIHR 128 (397)
T ss_dssp SEEEEEEEECS-SEEEEEEECTTCCEEEEEEEC
T ss_pred EEecCEeeeCC-ceEEEEEECCCCCEEEEEEEe
Confidence 34456899999 999999987 68999999875
No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=82.74 E-value=0.68 Score=50.19 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=30.0
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.....||.|+ ||.||+|.. .|..||||++.
T Consensus 183 ~~~f~~~~~LG~G~-fG~Vy~a~~~~tg~~vAvK~l~ 218 (576)
T 2acx_A 183 KNTFRQYRVLGKGG-FGEVCACQVRATGKMYACKKLE 218 (576)
T ss_dssp GGGEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred ccceEEEEEEeeCC-CEEEEEEEECCCCCEEEEEEEE
Confidence 46688888999999 999999998 48899999985
No 176
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=82.73 E-value=0.74 Score=46.21 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=29.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|.- .|..||||++..
T Consensus 24 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~~ 60 (371)
T 2xrw_A 24 LKRYQNLKPIGSGA-QGIVCAAYDAILERNVAIKKLSR 60 (371)
T ss_dssp ETTEEEEEEEEECS-SEEEEEEEETTTTEEEEEEEEEC
T ss_pred hhheeEeeeeEecC-CEEEEEEEECCCCceEEEEEecc
Confidence 35677788999999 999999986 588999999964
No 177
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=82.57 E-value=0.67 Score=50.05 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=29.0
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.- .|..||||.+..
T Consensus 157 ~~Y~i~~~lG~G~-fg~V~~~~~~~tg~~~AiK~i~~ 192 (573)
T 3uto_A 157 DHYDIHEELGTGA-FGVVHRVTERATGNNFAAKFVMT 192 (573)
T ss_dssp GTEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEC
T ss_pred cccEEEEEEeecc-CeEEEEEEECCCCCEEEEEEEec
Confidence 4566677899999 999999987 489999999864
No 178
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=82.34 E-value=0.79 Score=50.47 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.1
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|.. .|..||||++.
T Consensus 340 ~~~f~~~~~LG~G~-fG~V~~~~~~~~~~~vAvK~l~ 375 (674)
T 3pfq_A 340 LTDFNFLMVLGKGS-FGKVMLSERKGTDELYAVKILK 375 (674)
T ss_dssp CTTEEEEEESSBTT-TBCEEEEEESSSCCEEEEEEEE
T ss_pred ccceEEEEEEccCC-CEEEEEEEECCCCcEEEEEEEe
Confidence 35677778999999 999999998 47889999985
No 179
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=82.25 E-value=0.75 Score=49.85 Aligned_cols=25 Identities=12% Similarity=0.199 Sum_probs=19.3
Q ss_pred EEEEEecCChHhHHHHHHHHHHhhhc
Q 010658 7 KVYVAVGNDLQDGYRTLDWTIRKWKA 32 (505)
Q Consensus 7 kIlVAVDgS~~~S~~AL~WAl~~~~~ 32 (505)
.+-|.||.+.. +...+.-....+.-
T Consensus 15 t~e~~vd~~tt-~~ell~~V~~~LgL 39 (575)
T 2i1j_A 15 ELEFAIQQTTT-GKQLFDQVVKTIGL 39 (575)
T ss_dssp EEEEEEETTCB-HHHHHHHHHHHHTC
T ss_pred eEEEEECCCCC-HHHHHHHHHHHcCC
Confidence 56789999887 88888877776643
No 180
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=81.96 E-value=0.87 Score=44.51 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=26.3
Q ss_pred hhccccccccccCCCcceEEEEEE-------CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L-------~g~~VAVK~L~~ 495 (505)
.++|.-...||.|+ ||.||+|.. .|..||||.+..
T Consensus 29 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~ 70 (327)
T 2yfx_A 29 RKNITLIRGLGHGA-FGEVYEGQVSGMPNDPSPLQVAVKTLPE 70 (327)
T ss_dssp GGGCEEEEECC--C-SSCEEEEEC--------CCEEEEEECCS
T ss_pred hhheEEEEEEcCCC-CeeEEEEEEcCCCCCCccceEEEEEecc
Confidence 35677778999999 999999984 356899999964
No 181
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=81.83 E-value=0.77 Score=49.89 Aligned_cols=27 Identities=33% Similarity=0.581 Sum_probs=23.1
Q ss_pred ccccCCCcceEEEEEE----CCcEEEEEEccC
Q 010658 468 RLKCAGDWTNVYRGRL----NHASVAIKTLNN 495 (505)
Q Consensus 468 ~iG~gg~~G~VYkg~L----~g~~VAVK~L~~ 495 (505)
.||.|+ ||.||+|.. .+..||||.+..
T Consensus 343 ~LG~G~-fG~Vy~~~~~~~~~~~~vAvK~~~~ 373 (613)
T 2ozo_A 343 ELGCGN-FGSVRQGVYRMRKKQIDVAIKVLKQ 373 (613)
T ss_dssp EEEECS-SSEEEEEEEECSSCEEEEEEEECCC
T ss_pred EEecCC-CcEEEEEEEecCCCcEEEEEEEcCC
Confidence 799999 999999987 245799999974
No 182
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=81.81 E-value=0.62 Score=45.36 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=25.3
Q ss_pred HhhccccccccccCCCcceEEEEEEC--Cc---EEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLN--HA---SVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~--g~---~VAVK~L~~ 495 (505)
..++|.-...||.|+ ||.||+|... +. .||||.+..
T Consensus 21 ~~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~vavK~~~~ 61 (323)
T 3qup_A 21 PEQQFTLGRMLGKGE-FGSVREAQLKQEDGSFVKVAVKMLKA 61 (323)
T ss_dssp C---CEEEEEEEEET-TEEEEEEEC-------CEEEEEEC--
T ss_pred ChhHeEEeceecccC-CeEEEEEEEcccCCcceeEEEEEecc
Confidence 345677788999999 9999999873 32 799999964
No 183
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=81.73 E-value=20 Score=29.35 Aligned_cols=55 Identities=5% Similarity=-0.034 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHH
Q 010658 375 ELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFC 429 (505)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e~~ 429 (505)
.....++..+......+.-++.++..+...+.+....++.-.+....+-.++..+
T Consensus 37 ~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L 91 (101)
T 3u1c_A 37 ERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASL 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444555555555555555555555555555555555554444444444
No 184
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=81.65 E-value=29 Score=35.99 Aligned_cols=6 Identities=17% Similarity=0.274 Sum_probs=2.4
Q ss_pred EEEEEE
Q 010658 37 IVILHV 42 (505)
Q Consensus 37 IvllHV 42 (505)
|..|+.
T Consensus 36 L~~L~L 41 (487)
T 3oja_A 36 VKELDL 41 (487)
T ss_dssp CCEEEC
T ss_pred ccEEEe
Confidence 344443
No 185
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=81.49 E-value=1.1 Score=42.89 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=25.4
Q ss_pred cccccccccCCCcceEEEEEE--CC---cEEEEEEccC
Q 010658 463 FSERFRLKCAGDWTNVYRGRL--NH---ASVAIKTLNN 495 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L--~g---~~VAVK~L~~ 495 (505)
|....+||.|+ ||.||+|.. .+ ..||||.+..
T Consensus 23 ~~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~aiK~~~~ 59 (298)
T 3pls_A 23 THSDRVIGKGH-FGVVYHGEYIDQAQNRIQCAIKSLSR 59 (298)
T ss_dssp EEEEEEEEEET-TEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EccCceeccCC-CceEEEEEEecCCCceeeeeeeeccc
Confidence 44557899999 999999986 22 3799999874
No 186
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=81.26 E-value=17 Score=28.03 Aligned_cols=66 Identities=20% Similarity=0.258 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 010658 355 QSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRD 420 (505)
Q Consensus 355 ~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~ 420 (505)
.++.+.++.+++..+|...++....+...-......+..++.+|..=..+.......+.+.+..||
T Consensus 5 ~v~~l~~E~eel~~klk~~~ee~~~~~eee~~~~~~k~~lek~L~~E~~LK~QAVNKLAEIMNRKd 70 (71)
T 1uix_A 5 DVANLANEKEELNNKLKEAQEQLSRLKDEEISAAAIKAQFEKQLLTERTLKTQAVNKLAEIMNRKE 70 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 344455556666666665555544433222222234446666666655666666666666666553
No 187
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=81.24 E-value=0.8 Score=43.79 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=29.4
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+.|.-...||.|+ ||.||+|.. .|..||||.+.
T Consensus 21 ~~~y~i~~~lg~G~-~g~V~~~~~~~~~~~valK~~~ 56 (287)
T 2wei_A 21 AERYNIVCMLGKGS-FGEVLKCKDRITQQEYAVKVIN 56 (287)
T ss_dssp HHHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred hhcceeeEEEcCCC-CEEEEEEEEcCCCcEEEEEEec
Confidence 35677778999999 999999998 48899999985
No 188
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=81.03 E-value=0.86 Score=46.48 Aligned_cols=27 Identities=19% Similarity=-0.028 Sum_probs=24.2
Q ss_pred cccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 467 ~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+||.|+ ||.||+|.. .|..||||++.
T Consensus 68 ~~LG~G~-~g~V~~~~~~~~~~~vAiK~~~ 96 (400)
T 1nxk_A 68 QVLGLGI-NGKVLQIFNKRTQEKFALKMLQ 96 (400)
T ss_dssp EEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred ceeeecc-CeEEEEEEECCCCCEEEEEEeC
Confidence 5899999 999999987 47899999985
No 189
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=80.86 E-value=1.5 Score=45.69 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=29.7
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhc-CCCeEEEEEEe
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKA-QSISIVILHVT 43 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~-~g~~IvllHV~ 43 (505)
.+.+|+||+.|... |..+|.++.+.... .|..|+++||.
T Consensus 12 ~~~~vlVa~SGG~D-S~~Ll~ll~~~~~~~~g~~v~avhvd 51 (433)
T 1ni5_A 12 TSRQILVAFSGGLD-STVLLHQLVQWRTENPGVALRAIHVH 51 (433)
T ss_dssp TCSEEEEECCSBHH-HHHHHHHHHHHHTTSTTCEEEEEEEC
T ss_pred CCCEEEEEEcchHH-HHHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 46899999999997 88666555554443 57789999994
No 190
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=80.76 E-value=25 Score=30.56 Aligned_cols=50 Identities=10% Similarity=0.106 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 346 QRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAE 395 (505)
Q Consensus 346 ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e 395 (505)
+..+.....++..++.++.....++..+...+..|..++.+....+..+|
T Consensus 81 ~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 81 SLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445555554444444444444444444443333333333333
No 191
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=80.73 E-value=0.94 Score=43.69 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=27.0
Q ss_pred hccccc-cccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 461 EDFSER-FRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~-~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
++|.-. ..||.|+ ||.||++.- .|..||||.+..
T Consensus 17 ~~y~~~~~~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~ 53 (299)
T 3m2w_A 17 DDYKVTSQVLGLGI-NGKVLQIFNKRTQEKFALKMLQD 53 (299)
T ss_dssp GTEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEC
T ss_pred cchhhcCcccccCC-CeEEEEEEEcCCCcEEEEEEecc
Confidence 334433 5799999 999999987 588999999863
No 192
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=80.66 E-value=14 Score=29.91 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhH
Q 010658 352 LKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAK-----GHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRI 426 (505)
Q Consensus 352 eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~-----~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~ 426 (505)
||+++..+.....-..++-+.+..++..|+.++......- .-.+..|...-.++..+..+...+..+.+++...+
T Consensus 7 EKe~mq~LNdRlAsyIdKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~ 86 (93)
T 3s4r_A 7 EKVELQELNDRFANLIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDI 86 (93)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555555566655554433211 11233333333333344444444555555544444
Q ss_pred HHHH
Q 010658 427 EFCK 430 (505)
Q Consensus 427 e~~~ 430 (505)
+.++
T Consensus 87 ~~~k 90 (93)
T 3s4r_A 87 MRLR 90 (93)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 193
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=80.60 E-value=1 Score=47.31 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=27.9
Q ss_pred HhhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
..+.|.-...||.|+ ||.||+|.. .|..||||.+.
T Consensus 34 i~~~Y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~ 70 (504)
T 3q5i_A 34 IGESYFKVRKLGSGA-YGEVLLCKEKNGHSEKAIKVIK 70 (504)
T ss_dssp GGGTEEEEEEEEC---CEEEEEEEETTTCCEEEEEEEE
T ss_pred cccceEEEeEecccC-CeEEEEEEECCCCcEEEEEEEE
Confidence 346677788999999 999999998 47899999986
No 194
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=80.59 E-value=0.89 Score=46.33 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=29.5
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.-...||.|+ ||.||+|.. .|..||+|.+..
T Consensus 50 ~~~y~i~~~LG~G~-~g~Vy~~~~~~~~~~~a~K~~~~ 86 (387)
T 1kob_A 50 YDYYDILEELGSGA-FGVVHRCVEKATGRVFVAKFINT 86 (387)
T ss_dssp GGTEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEEC
T ss_pred ccceEEEEEEecCC-CEEEEEEEECCCCCEEEEEEecc
Confidence 35677778999999 999999988 478999999864
No 195
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=80.10 E-value=13 Score=28.20 Aligned_cols=59 Identities=14% Similarity=0.213 Sum_probs=38.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 340 ASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQL 398 (505)
Q Consensus 340 ~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l 398 (505)
+|-||+-..|....+|++++..=+.-+..+|-...+...-|+.+.+-+...+++++.++
T Consensus 3 kQNKeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k~~ 61 (74)
T 2q6q_A 3 QQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKL 61 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhc
Confidence 45677777788888888887777777777776665555555555555555555554443
No 196
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=80.08 E-value=1.3 Score=42.86 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=27.8
Q ss_pred hhccccccccccCCCcceEEEEEECCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~ 494 (505)
.++|.-...||.|+ ||.||+|...+ .||||.+.
T Consensus 32 ~~~~~~~~~lg~G~-~g~V~~~~~~~-~~avk~~~ 64 (319)
T 2y4i_B 32 FEQLEIGELIGKGR-FGQVYHGRWHG-EVAIRLID 64 (319)
T ss_dssp CSCEECCCBCCCSS-SSEEEEEEESS-SEEEEECC
T ss_pred HHHeEEeeEeccCC-ceEEEEEEEcC-eEEEEEee
Confidence 45677778999999 99999999865 49999986
No 197
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=80.07 E-value=1 Score=43.56 Aligned_cols=36 Identities=22% Similarity=0.181 Sum_probs=26.5
Q ss_pred HhhccccccccccCCCcceEEEEEEC-----CcEEEEEEccC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLN-----HASVAIKTLNN 495 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~-----g~~VAVK~L~~ 495 (505)
..++|.-...||.|+ ||.||+|... +..||||.+..
T Consensus 32 ~~~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~~~vavK~~~~ 72 (313)
T 3brb_A 32 DRNLLILGKILGEGE-FGSVMEGNLKQEDGTSLKVAVKTMKL 72 (313)
T ss_dssp CGGGEEEEEEEEC-C-CCCEEEEEEECTTSCEEEEEEEEC--
T ss_pred CHHHeeeccceeecC-CeEEEEEEEeccCCceeEEEEEEEec
Confidence 345677778899999 9999999872 24799999974
No 198
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=79.82 E-value=37 Score=31.14 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 349 LDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEE 414 (505)
Q Consensus 349 l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~ 414 (505)
...-..++..++...+.....|..+...+..|+++.......+.+++.++..|+...+-+..++++
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~E 155 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDE 155 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444466667778888888888888888889999999999999999999999998888888777775
No 199
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=79.70 E-value=1.1 Score=46.71 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=28.6
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
+.|.-...||.|+ ||.||+|.- .|..||||++.
T Consensus 22 ~~y~~~~~lG~G~-~g~V~~~~~~~~~~~vavK~~~ 56 (486)
T 3mwu_A 22 ERYNIVCMLGKGS-FGEVLKCKDRITQQEYAVKVIN 56 (486)
T ss_dssp HHEEEEEEEECCS-SSEEEEEEETTTCCEEEEEEEE
T ss_pred cceEEeEEEeecC-CEEEEEEEECCCCCEEEEEEEe
Confidence 4577778999999 999999987 48899999985
No 200
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=79.67 E-value=6.8 Score=41.06 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=29.5
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
..+||+||+.|-.. |--++.|+.+. |..|+.+|+.
T Consensus 9 ~~~KVvVA~SGGlD-SSvll~~L~e~----G~eViavtvd 43 (455)
T 1k92_A 9 VGQRIGIAFSGGLD-TSAALLWMRQK----GAVPYAYTAN 43 (455)
T ss_dssp TTSEEEEECCSSHH-HHHHHHHHHHT----TCEEEEEEEE
T ss_pred CCCeEEEEEcChHH-HHHHHHHHHHc----CCEEEEEEEE
Confidence 46799999999997 88899998663 7789999994
No 201
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=79.57 E-value=0.89 Score=46.18 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=27.4
Q ss_pred ccccccccccCCCcceEEEEEE-CCcEEEEEEccC
Q 010658 462 DFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLNN 495 (505)
Q Consensus 462 ~Fs~~~~iG~gg~~G~VYkg~L-~g~~VAVK~L~~ 495 (505)
.|....+||.|+ ||.||+|.. .+..||||++..
T Consensus 41 ~Y~~~~~lG~G~-~g~V~~a~~~~~~~~aikk~~~ 74 (394)
T 4e7w_A 41 AYTNCKVIGNGS-FGVVFQAKLVESDEVAIKKVLQ 74 (394)
T ss_dssp EEEEEEEEEEET-TEEEEEEEETTTEEEEEEEEEC
T ss_pred eEEEeEEEeeCC-CeEEEEEEECCCCeEEEEEEec
Confidence 466677999999 999999998 566799998853
No 202
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=79.06 E-value=33 Score=30.14 Aligned_cols=27 Identities=15% Similarity=0.022 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 342 RMEIQRDLDSLKEQSCEVIRDVEESKN 368 (505)
Q Consensus 342 R~e~ee~l~~eke~~e~~~~~~~~~~~ 368 (505)
|+-+|......-++++.+-.++.+++.
T Consensus 40 ~k~lE~r~~~deEr~~~lE~qLkeak~ 66 (147)
T 2b9c_A 40 MKVIESRAQKDEEKMEIQEIQLKEAKH 66 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccHHHHHHHHHHHHHHHH
Confidence 333333333333444444444444433
No 203
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=79.00 E-value=1.1 Score=43.91 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=28.3
Q ss_pred hccccccccccCCCcceEEEEEE--CC-cEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NH-ASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g-~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|.- .+ ..||||.+..
T Consensus 19 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~vavK~~~~ 55 (355)
T 2eu9_A 19 ERYEIVGNLGEGT-FGKVVECLDHARGKSQVALKIIRN 55 (355)
T ss_dssp TTEEEEEEEEEET-TEEEEEEEETTTTTEEEEEEEECS
T ss_pred ccEEEEEEeeccC-CeEEEEEEecCCCceEEEEEEEcc
Confidence 4677778999999 999999987 34 6899999864
No 204
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=78.96 E-value=0.99 Score=46.97 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=28.6
Q ss_pred hccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
+.|.-...||.|+ ||.||+|.- .|..||||++.
T Consensus 26 ~~y~~~~~lg~G~-~g~V~~~~~~~~~~~~avK~~~ 60 (484)
T 3nyv_A 26 DRYKGQRVLGKGS-FGEVILCKDKITGQECAVKVIS 60 (484)
T ss_dssp HHEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred CceEEeeEEecCC-CEEEEEEEECCCCCEEEEEEEE
Confidence 4566678999999 999999987 48899999985
No 205
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=78.79 E-value=1.1 Score=45.09 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=29.3
Q ss_pred hhccccccccccC--CCcceEEEEEE--CCcEEEEEEccC
Q 010658 460 TEDFSERFRLKCA--GDWTNVYRGRL--NHASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~g--g~~G~VYkg~L--~g~~VAVK~L~~ 495 (505)
.+.|.-...||.| + ||.||+|.. .|..||||++..
T Consensus 24 ~~~y~~~~~lG~G~~~-~g~V~~~~~~~~~~~vavK~~~~ 62 (389)
T 3gni_B 24 GGCYELLTVIGKGFED-LMTVNLARYKPTGEYVTVRRINL 62 (389)
T ss_dssp GGGEEEEEEEEEETTT-TEEEEEEEETTTCCEEEEEEEEG
T ss_pred CCcEEEEecccCCcCC-ceEEEEEEEcCCCCEEEEEEecc
Confidence 3456667799999 9 999999998 488999999963
No 206
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=78.69 E-value=1.2 Score=42.67 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=25.3
Q ss_pred cccccc-ccccCCCcceEEEEEE----CCcEEEEEEccC
Q 010658 462 DFSERF-RLKCAGDWTNVYRGRL----NHASVAIKTLNN 495 (505)
Q Consensus 462 ~Fs~~~-~iG~gg~~G~VYkg~L----~g~~VAVK~L~~ 495 (505)
.|.-.. .||.|+ ||.||+|.. .+..||||.+..
T Consensus 17 ~y~~~~~~lg~G~-~g~Vy~~~~~~~~~~~~vavK~~~~ 54 (291)
T 1xbb_A 17 LLTLEDKELGSGN-FGTVKKGYYQMKKVVKTVAVKILKN 54 (291)
T ss_dssp GEEEEEEEEEECS-SEEEEEEEEECSSSEEEEEEEEEC-
T ss_pred hhhhccCcccccc-CeeeEeeeecCCCceeeEEEEeecc
Confidence 344444 899999 999999965 257899999974
No 207
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=78.62 E-value=1.8 Score=42.21 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=29.7
Q ss_pred HhhccccccccccCCCcceEEEEEEC--C-----cEEEEEEccCC
Q 010658 459 ATEDFSERFRLKCAGDWTNVYRGRLN--H-----ASVAIKTLNNG 496 (505)
Q Consensus 459 AT~~Fs~~~~iG~gg~~G~VYkg~L~--g-----~~VAVK~L~~~ 496 (505)
..++|.-...||.|+ ||.||+|... | ..||||.+...
T Consensus 44 ~~~~~~~~~~lG~G~-~g~Vy~~~~~~~~~~~~~~~vavK~~~~~ 87 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGA-FGKVVEATAFGLGKEDAVLKVAVKMLKST 87 (333)
T ss_dssp CTTSEEEEEEEEECS-SEEEEEEEETTCSSSCCCCEEEEEEECTT
T ss_pred CHHHceeeeEeccCC-CcceEEEEecCCCcccchhHHHHHhcccc
Confidence 346677788999999 9999999873 2 37999999753
No 208
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=78.58 E-value=1.1 Score=43.68 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=26.2
Q ss_pred hccccccccccCCCcceEEEEEECCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|...+ .+|||.+..
T Consensus 36 ~~~~~~~~lG~G~-~g~Vy~~~~~~-~~avk~~k~ 68 (307)
T 3lb7_A 36 SEVMLSTRIGSGS-FGTVYKGKWHG-DVAVKILKV 68 (307)
T ss_dssp TSCCEEEEEEECS-SCEEEEEESSS-EEEEEECCC
T ss_pred cceEEEeEecCCC-CeEEEEEEECC-EEEEEEEec
Confidence 3455667899999 99999998754 589998863
No 209
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=78.26 E-value=27 Score=36.05 Aligned_cols=66 Identities=11% Similarity=0.036 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhHhHHHHhHHHH
Q 010658 364 EESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIA----RAEIVKDIEELRRQRDVLHRRIEFC 429 (505)
Q Consensus 364 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~----~~~~~~~~~~l~~~r~~~~~~~e~~ 429 (505)
..+..+|..++.....++.|+...++.+.-|.+-|++-+.+ .+++..++.+|.++-.++..+++++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T 3mq9_A 400 HLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERL 469 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455555555555666666666555544444433333 3344444444444444444444444
No 210
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=77.93 E-value=1.1 Score=44.05 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=28.8
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+.|.-...||.|+ ||.||++.. .|..||+|.+.
T Consensus 40 ~~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~a~K~~~ 75 (335)
T 2owb_A 40 RRRYVRGRFLGKGG-FAKCFEISDADTKEVFAGKIVP 75 (335)
T ss_dssp TEEEEEEEEEEEET-TEEEEEEEETTTCCEEEEEEEE
T ss_pred CCceEEEEEEeeCC-CeEEEEEEECCCCCEEEEEEec
Confidence 35677778999999 999999998 37899999986
No 211
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=77.72 E-value=0.96 Score=44.81 Aligned_cols=34 Identities=6% Similarity=-0.000 Sum_probs=27.4
Q ss_pred hccccccccccCCCcceEEEEEEC----------CcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRLN----------HASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L~----------g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|... |..||||.+..
T Consensus 42 ~~y~~~~~lg~G~-~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~ 85 (352)
T 2jii_A 42 RQWKLKSFQTRDN-QGILYEAAPTSTLTCDSGPQKQKFSLKLDAK 85 (352)
T ss_dssp CEEEEEEEEEEET-TEEEEEEEECC-----------CEEEEEEET
T ss_pred CeEEEEEEecCCC-CeEEEEEeecCCccccccccCceEEEEEecc
Confidence 5677778999999 9999999873 67899999864
No 212
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=77.28 E-value=34 Score=36.04 Aligned_cols=45 Identities=9% Similarity=0.170 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 358 EVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAV 402 (505)
Q Consensus 358 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~ 402 (505)
+|++.+..++.+++....++..|++.|.+.-..|..||..+..++
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqi 158 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKI 158 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666666666666667777777777777777777766443
No 213
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=77.00 E-value=1.6 Score=41.75 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=24.9
Q ss_pred cccccccccCCCcceEEEEEEC--C---cEEEEEEccC
Q 010658 463 FSERFRLKCAGDWTNVYRGRLN--H---ASVAIKTLNN 495 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L~--g---~~VAVK~L~~ 495 (505)
|.-...||.|+ ||.||+|... + ..||||.+..
T Consensus 27 y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~avk~~~~ 63 (298)
T 3f66_A 27 VHFNEVIGRGH-FGCVYHGTLLDNDGKKIHCAVKSLNR 63 (298)
T ss_dssp EEEEEEEEEET-TEEEEEEEEC-----CEEEEEEEETT
T ss_pred hhhcceeeecC-CceEEEEEEecCCCceeEEEEEeccc
Confidence 44557899999 9999999872 1 3589999874
No 214
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=76.88 E-value=1.4 Score=46.00 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=26.1
Q ss_pred hhccccccccccCCCcceEEEEEE--CCcEEEEEEcc
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN 494 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L--~g~~VAVK~L~ 494 (505)
.+.|.-...||.|+ ||.||+|.- .|..||||.+.
T Consensus 36 ~~~y~~~~~lG~G~-~g~V~~~~~~~~~~~~aiK~~~ 71 (494)
T 3lij_A 36 SEMYQRVKKLGSGA-YGEVLLCRDKVTHVERAIKIIR 71 (494)
T ss_dssp HHHEEEEEEEECC----EEEEEEETTTCCEEEEEEEE
T ss_pred hcCeEEeeEEecCC-CEEEEEEEECCCCcEEEEEEEe
Confidence 34577778999999 999999998 47899999986
No 215
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=76.35 E-value=1 Score=44.61 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=22.6
Q ss_pred hccccccccccCCCcceEEEEEE-----CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL-----NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L-----~g~~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. .+..||||.+..
T Consensus 37 ~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~~aiK~~~~ 75 (345)
T 2v62_A 37 NQWVLGKKIGSGG-FGLIYLAFPTNKPEKDARHVVKVEYQ 75 (345)
T ss_dssp CEEEEEEEC-------CEEEEEESSSCGGGCCEEEEEEEC
T ss_pred ceEEEEeeEeecC-CeEEEEEEecCCCCccceEEEEeeec
Confidence 4577778999999 999999998 346899999864
No 216
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=75.79 E-value=48 Score=30.35 Aligned_cols=81 Identities=14% Similarity=0.113 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHh
Q 010658 346 QRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRR 425 (505)
Q Consensus 346 ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~ 425 (505)
+..+...+.+..++..+++..+.++..... +...++......+..+..........+..+-+..|.|.+..+...-.
T Consensus 55 Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~---e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~S 131 (189)
T 2v71_A 55 EQRNRDLQADNQRLKYEVEALKEKLEHQYA---QSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMS 131 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Confidence 344445555666666666666666654333 22333333333444444444444444555666666666666555544
Q ss_pred HHHH
Q 010658 426 IEFC 429 (505)
Q Consensus 426 ~e~~ 429 (505)
++.+
T Consensus 132 leD~ 135 (189)
T 2v71_A 132 LEDF 135 (189)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 217
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=75.72 E-value=1.3 Score=48.22 Aligned_cols=28 Identities=29% Similarity=0.356 Sum_probs=23.6
Q ss_pred cccccCCCcceEEEEEE----CCcEEEEEEccC
Q 010658 467 FRLKCAGDWTNVYRGRL----NHASVAIKTLNN 495 (505)
Q Consensus 467 ~~iG~gg~~G~VYkg~L----~g~~VAVK~L~~ 495 (505)
..||.|+ ||.||+|.. .+..||||++..
T Consensus 375 ~~LG~G~-fG~Vy~~~~~~~~~~~~vAvK~~~~ 406 (635)
T 4fl3_A 375 KELGSGN-FGTVKKGYYQMKKVVKTVAVKILKN 406 (635)
T ss_dssp EEEEECS-SEEEEEEEEECSSCEEEEEEEEECG
T ss_pred CEeccCC-CEEEEEEEEcCCCcceEEEEEEecc
Confidence 4799999 999999976 247899999963
No 218
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=75.70 E-value=17 Score=33.12 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=26.8
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
.++|+|++.|-.. |--++.|+.+. +..|+.+|+.
T Consensus 3 ~~~v~v~lSGG~D-S~~ll~ll~~~----~~~v~~~~~~ 36 (219)
T 3bl5_A 3 KEKAIVVFSGGQD-STTCLLWALKE----FEEVETVTFH 36 (219)
T ss_dssp CCEEEEECCSSHH-HHHHHHHHHHH----CSEEEEEEEE
T ss_pred CCCEEEEccCcHH-HHHHHHHHHHc----CCceEEEEEe
Confidence 5789999999997 88777776553 3578899984
No 219
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=75.45 E-value=27 Score=27.28 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 381 SNKLQLSTMAKGHAEAQLEKAVIARAEIVK 410 (505)
Q Consensus 381 ~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~ 410 (505)
+..+......+..++..+..+...+.....
T Consensus 40 E~ev~~L~kKiq~lE~eld~~ee~l~~a~~ 69 (81)
T 1ic2_A 40 EDELVALQKKLKGTEDELDKYSESLKDAQE 69 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333444444433333333333
No 220
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=75.24 E-value=2.2 Score=43.03 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=24.9
Q ss_pred cccccccccCCCcceEEEEEE--C-C--cEEEEEEccC
Q 010658 463 FSERFRLKCAGDWTNVYRGRL--N-H--ASVAIKTLNN 495 (505)
Q Consensus 463 Fs~~~~iG~gg~~G~VYkg~L--~-g--~~VAVK~L~~ 495 (505)
|.-...||.|+ ||.||+|.. . + ..||||.+..
T Consensus 91 ~~~~~~LG~G~-fg~Vy~~~~~~~~~~~~~vavK~~~~ 127 (373)
T 3c1x_A 91 VHFNEVIGRGH-FGCVYHGTLLDNDGKKIHCAVKSLNR 127 (373)
T ss_dssp EEEEEEEECCS-SSEEEEEEEEETTTEEEEEEEEECCS
T ss_pred eecCcEeeeCC-CeEEEEEEEECCCCcEEEEEEEEcCC
Confidence 34456899999 999999987 2 2 3689999864
No 221
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=74.41 E-value=1.8 Score=42.13 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=27.3
Q ss_pred hccccccccccCCCcceEEEEEE--CCcE--EEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL--NHAS--VAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L--~g~~--VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. +|.. ||||.+..
T Consensus 25 ~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~v~iK~~~~ 62 (327)
T 1fvr_A 25 NDIKFQDVIGEGN-FGQVLKARIKKDGLRMDAAIKRMKE 62 (327)
T ss_dssp GGCEEEEEEECGG-GCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred HHccceeeeecCC-CceEEEEEEccCCcccceeeeeecc
Confidence 4577778999999 999999987 4654 59998863
No 222
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=74.29 E-value=38 Score=28.37 Aligned_cols=66 Identities=14% Similarity=0.193 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 349 LDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEE 414 (505)
Q Consensus 349 l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~ 414 (505)
...-..++..++...+.....|+.+...+..|+.+.......+.+++.++..|+..-+-|..++++
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~E 102 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDE 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445555566666666666666666666666666666666666666666666655555555553
No 223
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=74.21 E-value=1.6 Score=47.83 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=29.3
Q ss_pred hccccccccccCCCcceEEEEEE---CCcEEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL---NHASVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L---~g~~VAVK~L~~ 495 (505)
+.|.-...||.|+ ||.||+|.. +|..||||.+..
T Consensus 80 ~~y~i~~~lg~G~-~g~Vy~a~~~~~~~~~vaiK~~~~ 116 (681)
T 2pzi_A 80 GQYEVKGCIAHGG-LGWIYLALDRNVNGRPVVLKGLVH 116 (681)
T ss_dssp TTEEEEEEEEEET-TEEEEEEEEGGGTTEEEEEEESCS
T ss_pred CceEEEEEEeeCC-CeEEEEEEEcCCCCcEEEEEEeCc
Confidence 5677778999999 999999986 478999999864
No 224
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=73.45 E-value=31 Score=29.99 Aligned_cols=11 Identities=18% Similarity=0.036 Sum_probs=4.4
Q ss_pred HHHhhhhHHHH
Q 010658 321 ICLCNSRADQL 331 (505)
Q Consensus 321 ~~~~~~~~~~~ 331 (505)
++.|+--+.++
T Consensus 60 VLaALNiadEl 70 (138)
T 3hnw_A 60 DMMYLNIADDY 70 (138)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44343344433
No 225
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=73.09 E-value=1.6 Score=41.41 Aligned_cols=34 Identities=29% Similarity=0.313 Sum_probs=21.4
Q ss_pred hccccccccccCCCcceEEEEEE---CCc--EEEEEEccC
Q 010658 461 EDFSERFRLKCAGDWTNVYRGRL---NHA--SVAIKTLNN 495 (505)
Q Consensus 461 ~~Fs~~~~iG~gg~~G~VYkg~L---~g~--~VAVK~L~~ 495 (505)
++|.-...||.|+ ||.||+|.. .+. .||||.+..
T Consensus 18 ~~y~~~~~lg~G~-~g~Vy~~~~~~~~~~~~~vavK~~~~ 56 (291)
T 1u46_A 18 KDLRLLEKLGDGS-FGVVRRGEWDAPSGKTVSVAVKCLKP 56 (291)
T ss_dssp GGEEEEEECC-----CCCEEEEEECTTSCEEEEEEEC---
T ss_pred hHeeeeeeecCCC-ceeEEEEEeccCCCceeEEEEEEEcc
Confidence 4577778999999 999999986 233 689999864
No 226
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=72.67 E-value=90 Score=32.02 Aligned_cols=68 Identities=9% Similarity=0.118 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 342 RMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDI 412 (505)
Q Consensus 342 R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~ 412 (505)
+.++++.|++.+.-+.+++.+..-.. ..++..+..|+.+.....-.+.|+|.++.+...+++.+..+.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (471)
T 3mq9_A 399 THLLQQELTEAQKGFQDVEAQAATAN---HTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEV 466 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777777777777776654332 223444445555444444455566655554433333333333
No 227
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=71.56 E-value=40 Score=27.46 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHH
Q 010658 384 LQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFC 429 (505)
Q Consensus 384 ~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e~~ 429 (505)
+......+.-++.++..+...+......++.-.+.+..+-.++..+
T Consensus 46 i~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasL 91 (101)
T 3u59_A 46 QQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASL 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444444444444444444444444443344333
No 228
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=71.39 E-value=37 Score=27.05 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 348 DLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNK 383 (505)
Q Consensus 348 ~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~ 383 (505)
.+...++.+++....+.++......+...+..|..|
T Consensus 22 el~~lke~l~k~e~~rkele~~~~~l~~ek~~L~~q 57 (89)
T 3bas_A 22 QMDKMKEDLAKTERIKKELEEQNVTLLEQKNDLFGS 57 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444433333333333343333444344333
No 229
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=70.23 E-value=47 Score=27.77 Aligned_cols=18 Identities=17% Similarity=0.291 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHhHhHHH
Q 010658 406 AEIVKDIEELRRQRDVLH 423 (505)
Q Consensus 406 ~~~~~~~~~l~~~r~~~~ 423 (505)
.++.+..|.|++..++..
T Consensus 59 ReLEq~NDDLER~~R~t~ 76 (111)
T 2v66_B 59 RELEQANDDLERAKRATI 76 (111)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhchHHHHHHHHHH
Confidence 333334444444433333
No 230
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=68.93 E-value=65 Score=28.89 Aligned_cols=73 Identities=16% Similarity=0.196 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 010658 341 SRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRD 420 (505)
Q Consensus 341 ~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~ 420 (505)
.|..++..++.-..++++-++.+-...+ ...+|+.++......++.+...+..+......+...+-.|++.+.
T Consensus 63 ~k~~Leke~~~LQa~L~qEr~~r~q~se-------~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a 135 (168)
T 3o0z_A 63 SKSQTDKDYYQLQAILEAERRDRGHDSE-------MIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKN 135 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444433332222 223444444444444445555555544454555555555555443
No 231
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=68.92 E-value=16 Score=37.40 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=27.9
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
++|+||+.|-.. |--+|.|+.+.+ |..|+.+||.
T Consensus 1 ~kVvva~SGG~D-Ssvll~ll~~~~---g~~V~av~vd 34 (400)
T 1kor_A 1 MKIVLAYSGGLD-TSIILKWLKETY---RAEVIAFTAD 34 (400)
T ss_dssp CEEEEECCSSHH-HHHHHHHHHHHH---TCEEEEEEEE
T ss_pred CcEEEEEeChHH-HHHHHHHHHHhh---CCcEEEEEEe
Confidence 479999999997 888999987654 4678999984
No 232
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=67.79 E-value=99 Score=31.86 Aligned_cols=47 Identities=23% Similarity=0.278 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 358 EVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIA 404 (505)
Q Consensus 358 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~ 404 (505)
+++++.+...++.+...+++..++..+.+...++.+..+++..|+.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (487)
T 3oja_A 432 NAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVR 478 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHHH
Confidence 34444444444444444444444554444444444444444443333
No 233
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=67.65 E-value=55 Score=28.86 Aligned_cols=59 Identities=20% Similarity=0.313 Sum_probs=34.8
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSL----KEQSCEVIRDVEESKNRLSSLIELQSELSNKLQ 385 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~e----ke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 385 (505)
...+.-.....|++.|+.+...|..- ++.+.+.+..+++-++++..+...+.+|.++++
T Consensus 83 ~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 83 LLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444444566777777776555544 334445566666666666666666666665543
No 234
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=67.23 E-value=14 Score=38.14 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=28.2
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
.++|+||+.|-.. |--++.|+.+. |..|+.+|+.
T Consensus 5 ~~kVvvalSGGlD-Ssvll~lL~e~----G~eV~av~vd 38 (413)
T 2nz2_A 5 KGSVVLAYSGGLD-TSCILVWLKEQ----GYDVIAYLAN 38 (413)
T ss_dssp CEEEEEECCSSHH-HHHHHHHHHHT----TEEEEEEEEE
T ss_pred CCeEEEEEcChHH-HHHHHHHHHHc----CCEEEEEEEE
Confidence 4789999999997 88888888663 6688999984
No 235
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=66.95 E-value=58 Score=27.57 Aligned_cols=15 Identities=20% Similarity=0.093 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHH
Q 010658 388 TMAKGHAEAQLEKAV 402 (505)
Q Consensus 388 ~~~~~e~e~~l~~~~ 402 (505)
...+.+|+.+|+..-
T Consensus 46 ~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 46 KGHVSELEADLAEQQ 60 (120)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444555555443
No 236
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=66.51 E-value=2.6 Score=44.98 Aligned_cols=30 Identities=13% Similarity=0.010 Sum_probs=19.1
Q ss_pred ccccccccCCCcceEEEEEECCcEEEEEEcc
Q 010658 464 SERFRLKCAGDWTNVYRGRLNHASVAIKTLN 494 (505)
Q Consensus 464 s~~~~iG~gg~~G~VYkg~L~g~~VAVK~L~ 494 (505)
.+..+||+|+ ||.||+|...+..+++|++.
T Consensus 339 ~~~~~LG~G~-fg~Vy~~~~~~~~~~~k~~~ 368 (540)
T 3en9_A 339 IPEHLIGKGA-EADIKRDSYLDFDVIIKERV 368 (540)
T ss_dssp ---------C-CEEEEEEECSSCEEEEEEEC
T ss_pred CCCCEEeeCC-CEEEEEEEECCCeEEEEEEe
Confidence 4466899999 99999998888999999875
No 237
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=66.40 E-value=1.3e+02 Score=31.32 Aligned_cols=7 Identities=14% Similarity=0.074 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 010658 352 LKEQSCE 358 (505)
Q Consensus 352 eke~~e~ 358 (505)
.|..+++
T Consensus 155 aKk~Y~~ 161 (486)
T 3haj_A 155 AKKAHHA 161 (486)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 238
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=65.89 E-value=62 Score=27.51 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 381 SNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELR 416 (505)
Q Consensus 381 ~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~ 416 (505)
..++.+......++..+..+.-..+..+...++.+.
T Consensus 89 ~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led~e 124 (129)
T 2fxo_A 89 NKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDLE 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333344444444444444445555555543
No 239
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=65.89 E-value=93 Score=32.83 Aligned_cols=14 Identities=0% Similarity=0.043 Sum_probs=7.3
Q ss_pred hhHhhhhhhhhHHH
Q 010658 271 NAAEQIDSNMSVAE 284 (505)
Q Consensus 271 ~~~~~~~~~~~eae 284 (505)
..=+.|...+...|
T Consensus 46 PSGCrLQglLdkqE 59 (562)
T 3ghg_A 46 PSGCRMKGLIDEVN 59 (562)
T ss_dssp ECHHHHHHHHHHHH
T ss_pred CcccchhhhHHhhc
Confidence 34455555555554
No 240
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=65.50 E-value=20 Score=32.81 Aligned_cols=34 Identities=9% Similarity=0.011 Sum_probs=24.2
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEee
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTY 44 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~ 44 (505)
.+|+||+.|... |.-.|..+.+.. ..|.++||..
T Consensus 45 ~~v~Va~SGGkD-S~vLL~ll~~~~----~~v~~v~vd~ 78 (215)
T 1sur_A 45 GEYVLSSSFGIQ-AAVSLHLVNQIR----PDIPVILTDT 78 (215)
T ss_dssp SEEEEECCCCTT-HHHHHHHHHHHS----TTCEEEEEEC
T ss_pred CCEEEEecCCHH-HHHHHHHHHHhC----CCCeEEEeeC
Confidence 589999999987 875555444432 3578899853
No 241
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=65.09 E-value=59 Score=34.05 Aligned_cols=17 Identities=0% Similarity=0.036 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHhHhHH
Q 010658 406 AEIVKDIEELRRQRDVL 422 (505)
Q Consensus 406 ~~~~~~~~~l~~~r~~~ 422 (505)
.-+...++++.++..++
T Consensus 405 ~~~~a~~d~~~~~~s~~ 421 (551)
T 2b5u_A 405 NNKQAAFDAAAKEKSDA 421 (551)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcccch
Confidence 33444455555555443
No 242
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=64.70 E-value=4.2 Score=44.44 Aligned_cols=35 Identities=26% Similarity=0.201 Sum_probs=28.2
Q ss_pred hhccccccccccCCCcceEEEEEEC-----CcEEEEEEccC
Q 010658 460 TEDFSERFRLKCAGDWTNVYRGRLN-----HASVAIKTLNN 495 (505)
Q Consensus 460 T~~Fs~~~~iG~gg~~G~VYkg~L~-----g~~VAVK~L~~ 495 (505)
.+.|.-...||.|+ ||.||+|... +..||||.+..
T Consensus 389 ~~~y~i~~~LG~G~-fG~Vy~a~~~~~~~~~~~vaiK~~~~ 428 (656)
T 2j0j_A 389 RERIELGRCIGEGQ-FGDVHQGIYMSPENPAMAVAIKTCKN 428 (656)
T ss_dssp GGGEEEEEEEECCS-SCCEEEEEECCSSSCCEEEEEEECSS
T ss_pred cccEEEeeEEeeCC-CEEEEEEEEecCCCccEEEEEEEecc
Confidence 35566678899999 9999999872 35799999864
No 243
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=64.69 E-value=73 Score=27.89 Aligned_cols=54 Identities=19% Similarity=0.154 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 349 LDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAV 402 (505)
Q Consensus 349 l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~ 402 (505)
|...+.-.+..-+..+++..+|..+...+.-.+.++..+...+.+|+.+|....
T Consensus 61 Lkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~ 114 (147)
T 2b9c_A 61 LKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVT 114 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444455555555544444445555555555555555555333
No 244
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=64.08 E-value=22 Score=27.42 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 391 KGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 391 ~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
+.+++.+|..--.++.+++.+++++
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333333334444444443
No 245
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=63.46 E-value=37 Score=31.33 Aligned_cols=33 Identities=6% Similarity=0.093 Sum_probs=26.8
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
++|+|++-|-.. |--++.|+.+.. ..|+.||+.
T Consensus 3 ~kvvv~lSGG~D-S~~~l~ll~~~~----~~v~av~~~ 35 (232)
T 2pg3_A 3 KRAVVVFSGGQD-STTCLIQALQDY----DDVHCITFD 35 (232)
T ss_dssp CEEEEECCSSHH-HHHHHHHHHHHC----SEEEEEEEE
T ss_pred CCEEEEecCcHH-HHHHHHHHHHcC----CCEEEEEEE
Confidence 589999999997 888888887643 578889984
No 246
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=62.67 E-value=50 Score=25.34 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 010658 356 SCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRD 420 (505)
Q Consensus 356 ~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~ 420 (505)
++.+.++.+++..+|...++....+. -.+.+..+..++.+|..=..+.......+.+++..||
T Consensus 8 i~~l~~E~eel~~klk~~~ee~~~~~--eee~~~~~~~lek~L~~E~~LK~QAVNKLAEIMNRKd 70 (71)
T 1s1c_X 8 IEILRRENEELTEKMKKAEEEYKLEK--EEEISNLKAAFEKNINTERTLKTQAVNKLAEIMNRKD 70 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 44455555666666655554443332 1122233446777777666666777777777776654
No 247
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=61.30 E-value=87 Score=27.67 Aligned_cols=35 Identities=11% Similarity=0.208 Sum_probs=23.3
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSLKEQSCEVIR 361 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~eke~~e~~~~ 361 (505)
..+.+-..+.+|-.+|.++|....+.-.++|.+--
T Consensus 59 e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLTa 93 (154)
T 2ocy_A 59 EVKRLREDIAKENELRTKAEEEADKLNKEVEDLTA 93 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555677777888888777777777766543
No 248
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=60.71 E-value=1.5e+02 Score=30.03 Aligned_cols=62 Identities=19% Similarity=0.355 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHh
Q 010658 357 CEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRR 425 (505)
Q Consensus 357 e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~ 425 (505)
+.+....+.++.+|..+.+.+..|+..++.-....-++++++. .++=++-+|++.||..+..
T Consensus 201 ~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~lkp~l~ql~k~rd~~~~~ 262 (373)
T 3hhm_B 201 QRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMN-------SIKPDLIQLRKTRDQYLMW 262 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHTC----
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------ccChHHHHHHHHHHHHHHH
Confidence 3445555555556655555555555555544444445555544 3444556777777755433
No 249
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=60.18 E-value=14 Score=39.95 Aligned_cols=41 Identities=7% Similarity=0.183 Sum_probs=1.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 374 IELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEE 414 (505)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~ 414 (505)
.+.+..|+.++.+.+..+..++.+......+...+..++..
T Consensus 404 ~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 444 (575)
T 2i1j_A 404 AAERQKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVED 444 (575)
T ss_dssp --------------------------------------CHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566666666666666666555555554444444333
No 250
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=59.67 E-value=38 Score=26.06 Aligned_cols=21 Identities=19% Similarity=0.132 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 010658 378 SELSNKLQLSTMAKGHAEAQL 398 (505)
Q Consensus 378 ~~l~~~~~~~~~~~~e~e~~l 398 (505)
.+|+.++.+.+..+.+|..+|
T Consensus 43 ~eLEk~L~ekd~eI~~LqseL 63 (72)
T 3nmd_A 43 DELELELDQKDELIQMLQNEL 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444
No 251
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=57.87 E-value=24 Score=36.96 Aligned_cols=84 Identities=12% Similarity=0.002 Sum_probs=53.3
Q ss_pred HHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHhhhccCccEEEE
Q 010658 21 RTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSKYLGFCGKVKAEILK 100 (505)
Q Consensus 21 ~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~~v~ve~~v 100 (505)
.||..|++.+...+..|+.|.|.+|.. .. . ... ...-..+-|..+..-+++.+....+
T Consensus 53 ~aL~~A~~~a~~~~~~v~~vfi~dp~~----~~-~---------~~~--------r~~Fl~~sL~~L~~~L~~~G~~L~v 110 (482)
T 2xry_A 53 WALLFSRAIAKEANVPVVVVFCLTDEF----LE-A---------GIR--------QYEFMLKGLQELEVSLSRKKIPSFF 110 (482)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEEECTTG----GG-S---------CHH--------HHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEEeChhh----hc-c---------CHH--------HHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 578888876654566788999988742 11 0 111 0111222333344444455666777
Q ss_pred EecCCCChHHHHHHHHHHcCCCEEEEccC
Q 010658 101 VEKSDEPVHKLILDLVSRLTITKLVMGLS 129 (505)
Q Consensus 101 ve~~~~d~~~~Ive~a~~~~idlLVmGs~ 129 (505)
..| +|.+.|.+++++++|+.|+.-..
T Consensus 111 ~~g---~~~~~l~~l~~~~~~~~V~~~~~ 136 (482)
T 2xry_A 111 LRG---DPGEKISRFVKDYNAGTLVTDFS 136 (482)
T ss_dssp EES---CHHHHHHHHHHHTTCSEEEEECC
T ss_pred EeC---CHHHHHHHHHHHcCCCEEEEecc
Confidence 776 89999999999999999998543
No 252
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=57.53 E-value=25 Score=34.96 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=27.3
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
..+|+|++-|... |.-.|..+.+.+...+..|.+|||.
T Consensus 46 ~~~ivVa~SGGkD-S~vLL~Ll~~~~~~~~~~i~vv~vD 83 (325)
T 1zun_A 46 FDNPVMLYSIGKD-SAVMLHLARKAFFPGKLPFPVMHVD 83 (325)
T ss_dssp CSSEEEECCSSHH-HHHHHHHHHHHHTTSCCSSCEEEEC
T ss_pred CCCEEEEEcChHH-HHHHHHHHHHhccccCCCEEEEEEE
Confidence 4579999999887 8866666666554334467888983
No 253
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=56.83 E-value=87 Score=26.24 Aligned_cols=28 Identities=21% Similarity=0.335 Sum_probs=17.5
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSLKE 354 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~eke 354 (505)
-++++...|-+|+..|..+|..+..-|.
T Consensus 49 ~~edfk~KyE~E~~~r~~~E~di~~lrK 76 (119)
T 3ol1_A 49 DIMRLREKLQEEMLQREEAENTLQSFRQ 76 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhhh
Confidence 3455666677788777777754444433
No 254
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=56.50 E-value=86 Score=26.06 Aligned_cols=11 Identities=0% Similarity=-0.233 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 010658 356 SCEVIRDVEES 366 (505)
Q Consensus 356 ~e~~~~~~~~~ 366 (505)
++-++.|++-.
T Consensus 64 I~vLkaQv~IY 74 (110)
T 2v4h_A 64 VPVLKAQADIY 74 (110)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33334444333
No 255
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=56.38 E-value=49 Score=34.13 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=27.9
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
..||+||+.|-.. |--++.|+.+ .|..|+.||+.
T Consensus 14 ~~KVVVA~SGGlD-SSv~a~~Lke----~G~eViavt~d 47 (421)
T 1vl2_A 14 KEKVVLAYSGGLD-TSVILKWLCE----KGFDVIAYVAN 47 (421)
T ss_dssp CCEEEEECCSSHH-HHHHHHHHHH----TTCEEEEEEEE
T ss_pred cCCEEEEeCCcHH-HHHHHHHHHH----CCCeEEEEEEE
Confidence 4789999999997 8888889855 36788889883
No 256
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=54.01 E-value=89 Score=26.53 Aligned_cols=73 Identities=8% Similarity=-0.005 Sum_probs=30.7
Q ss_pred HHHhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 329 DQLESLTKEDVASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIA 404 (505)
Q Consensus 329 ~~~e~~~~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~ 404 (505)
.++|.||..-+ +++.....+-.+.+...+.++-+.+..++.+......+.++-...+..+.+++.....++..
T Consensus 9 ~eaE~~y~~K~---eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~ 81 (131)
T 3tnu_A 9 KDAEEWFFTKT---EELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQ 81 (131)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45566664322 23344455556666777788888888888887777777777777777788877777655444
No 257
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=53.94 E-value=64 Score=31.54 Aligned_cols=36 Identities=8% Similarity=0.092 Sum_probs=27.1
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEee
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTY 44 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~ 44 (505)
+.+|+|++-|-.. |--++.++.+.+ |..|+.+||..
T Consensus 20 ~~kvlvalSGGvD-Ssvla~ll~~~~---g~~v~av~vd~ 55 (308)
T 2dpl_A 20 DSKAIIALSGGVD-SSTAAVLAHKAI---GDRLHAVFVNT 55 (308)
T ss_dssp TSCEEEECCSSHH-HHHHHHHHHHHH---GGGEEEEEEEC
T ss_pred CCCEEEEEeChHH-HHHHHHHHHHhh---CCCEEEEEEcC
Confidence 4689999999987 876776665543 45788999943
No 258
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=53.82 E-value=1e+02 Score=26.06 Aligned_cols=64 Identities=16% Similarity=0.159 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 010658 353 KEQSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQR 419 (505)
Q Consensus 353 ke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r 419 (505)
+.+++.++.+++.++.+-+ .-...|..++......+.+.......|......+..+++.+++.+
T Consensus 21 kreie~lk~ele~l~~E~q---~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~~~~ 84 (120)
T 3i00_A 21 YREISGLKAQLENMKTESQ---RVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQR 84 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555555555533333 223345555555555666666666667777777777777776555
No 259
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=53.36 E-value=45 Score=35.07 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=27.0
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
..+|+||+.|-.. |--++.++.+. |..|+.|||.
T Consensus 209 ~~kvvvalSGGvD-Ssvla~ll~~~----g~~v~av~vd 242 (503)
T 2ywb_A 209 KDRVLLAVSGGVD-SSTLALLLAKA----GVDHLAVFVD 242 (503)
T ss_dssp TSEEEEEECSSHH-HHHHHHHHHHH----TCEEEEEEEE
T ss_pred CccEEEEecCCcc-hHHHHHHHHHc----CCeEEEEEEe
Confidence 4789999999987 87777666543 6889999984
No 260
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=52.87 E-value=83 Score=32.11 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=27.4
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEee
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTY 44 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~ 44 (505)
..+|+|++.|-.. |--|+.++.+ .|..|+.|||..
T Consensus 187 ~~kvlvalSGGvD-S~vll~ll~~----~G~~v~av~v~~ 221 (413)
T 2c5s_A 187 GGKVMVLLSGGID-SPVAAYLTMK----RGVSVEAVHFHS 221 (413)
T ss_dssp TEEEEEECCSSSH-HHHHHHHHHH----BTEEEEEEEEEC
T ss_pred CCeEEEEeCCCCh-HHHHHHHHHH----cCCcEEEEEEeC
Confidence 5789999999887 8777766654 377899999953
No 261
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=52.07 E-value=84 Score=24.61 Aligned_cols=24 Identities=21% Similarity=0.371 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 365 ESKNRLSSLIELQSELSNKLQLST 388 (505)
Q Consensus 365 ~~~~~l~~~~~~~~~l~~~~~~~~ 388 (505)
++..+|+.+..++.+|+.+++.+.
T Consensus 10 ~~~~klq~~E~rN~~Le~~v~~le 33 (79)
T 3cvf_A 10 ETQQKVQDLETRNAELEHQLRAME 33 (79)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHH
Confidence 333444444444444444433333
No 262
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=51.06 E-value=22 Score=37.69 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=27.1
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
.++|+||+.|-.. |--++.++.+.+ |..|+.|||.
T Consensus 230 ~~kvlvalSGGvD-Ssvla~ll~~~~---G~~v~av~vd 264 (527)
T 3tqi_A 230 KEQVIVGLSGGVD-SAVTATLVHKAI---GDQLVCVLVD 264 (527)
T ss_dssp TSCEEEECTTTHH-HHHHHHHHHHHH---GGGEEEEEEC
T ss_pred CCeEEEEEecCcC-HHHHHHHHHHHh---CCeEEEEEec
Confidence 4789999999997 887776665543 4679999994
No 263
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=50.66 E-value=44 Score=26.64 Aligned_cols=45 Identities=9% Similarity=0.045 Sum_probs=21.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 336 KEDVASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSNKL 384 (505)
Q Consensus 336 ~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~ 384 (505)
.+|++.|+-.|-.+..+.. +++.++.+..+|..+..++..|..++
T Consensus 35 ~KElKiKeGaENL~katt~----~kk~~~~V~~eL~~sn~kl~~L~~eL 79 (86)
T 1cxz_B 35 RKELKLKEGAENLRRATTD----LGRSLGPVELLLRGSSRRLDLLHQQL 79 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHhHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666654444432 33334444444444444444444433
No 264
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=50.24 E-value=93 Score=24.62 Aligned_cols=29 Identities=7% Similarity=0.258 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 342 RMEIQRDLDSLKEQSCEVIRDVEESKNRL 370 (505)
Q Consensus 342 R~e~ee~l~~eke~~e~~~~~~~~~~~~l 370 (505)
|+.+++.|..-+++++++..+++..+.++
T Consensus 46 Kkkl~~el~~h~~ei~~le~~i~rhk~~i 74 (84)
T 1gmj_A 46 KKHKENEISHHAKEIERLQKEIERHKQSI 74 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555555444444
No 265
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=50.01 E-value=56 Score=33.09 Aligned_cols=38 Identities=16% Similarity=0.102 Sum_probs=26.4
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
|.....+|+||+.|-.. |--++.++. ..|..|+.||+.
T Consensus 13 ~~~~~~kVvVa~SGGvD-Ssv~a~lL~----~~G~~V~~v~~~ 50 (380)
T 2der_A 13 MSETAKKVIVGMSGGVD-SSVSAWLLQ----QQGYQVEGLFMK 50 (380)
T ss_dssp ----CCEEEEECCSCST-THHHHHHHH----TTCCEEEEEEEE
T ss_pred CCCCCCEEEEEEEChHH-HHHHHHHHH----HcCCeEEEEEEE
Confidence 66678899999999987 775555543 347789999984
No 266
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=49.30 E-value=32 Score=36.36 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHhhhccCccEEEE
Q 010658 21 RTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSKYLGFCGKVKAEILK 100 (505)
Q Consensus 21 ~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~~v~ve~~v 100 (505)
.||..|++.+...+..|+.|.|.+|.. +.+.. ... ...-+.+-|.....-+++.++...+
T Consensus 54 ~AL~~A~~~a~~~~~pVl~vfildp~~---~~~~~---------~~~--------r~~FL~~sL~dL~~~L~~lG~~L~v 113 (506)
T 3umv_A 54 WALLHAAGLAAASASPLAVAFALFPRP---FLLSA---------RRR--------QLGFLLRGLRRLAADAAARHLPFFL 113 (506)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCCTT---CGGGC---------CHH--------HHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhhhcCCCEEEEEeccchh---hccCC---------CHH--------HHHHHHHHHHHHHHHHHHcCCceEE
Confidence 578888887765567799999988742 11110 110 0111222233333334456677777
Q ss_pred EecCCCChHHHHHHHHHHcCCCEEEE
Q 010658 101 VEKSDEPVHKLILDLVSRLTITKLVM 126 (505)
Q Consensus 101 ve~~~~d~~~~Ive~a~~~~idlLVm 126 (505)
..| +|.+. .+++++++|+.|+.
T Consensus 114 ~~G---~p~~v-~~L~~~~~a~~V~~ 135 (506)
T 3umv_A 114 FTG---GPAEI-PALVQRLGASTLVA 135 (506)
T ss_dssp ESS---CTTHH-HHHHHHTTCSEEEE
T ss_pred Eec---ChHHH-HHHHHhcCCCEEEe
Confidence 776 78888 99999999999996
No 267
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=49.24 E-value=2.2e+02 Score=30.60 Aligned_cols=12 Identities=8% Similarity=0.204 Sum_probs=6.3
Q ss_pred ccCCCceEEEEEeC
Q 010658 150 HHMPDYCELFIICG 163 (505)
Q Consensus 150 k~Ap~~C~V~vV~k 163 (505)
+.-| .-+|+|.+
T Consensus 173 ~~fP--~~~wvvRD 184 (592)
T 1f5n_A 173 SFFP--DFVWTLRD 184 (592)
T ss_dssp HHCC--EEEEEEET
T ss_pred ccCC--ceEEEEec
Confidence 3345 45566654
No 268
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=48.25 E-value=2e+02 Score=30.17 Aligned_cols=34 Identities=6% Similarity=0.056 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 348 DLDSLKEQSCEVIRDVEESKNRLSSLIELQSELS 381 (505)
Q Consensus 348 ~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~ 381 (505)
.++++-+=+..++.++|.+...|..........+
T Consensus 343 r~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~~f~ 376 (551)
T 2b5u_A 343 RQAKAVQVYNSRKSELDAANKTLADAIAEIKQFN 376 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHhhHHHHHhhhhHHHHHHHhhhhhh
Confidence 3344444455566777777777665554444333
No 269
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=48.08 E-value=45 Score=34.15 Aligned_cols=25 Identities=16% Similarity=0.147 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 375 ELQSELSNKLQLSTMAKGHAEAQLE 399 (505)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~e~e~~l~ 399 (505)
++..+|+..++.+...+.++.+++.
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~~~~ 41 (403)
T 4etp_A 17 EKIAALKEKIKDTELGMKELNEILI 41 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444443
No 270
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=48.07 E-value=1e+02 Score=24.55 Aligned_cols=21 Identities=24% Similarity=0.332 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 010658 353 KEQSCEVIRDVEESKNRLSSL 373 (505)
Q Consensus 353 ke~~e~~~~~~~~~~~~l~~~ 373 (505)
|--.+++.++.++..+-|.++
T Consensus 17 K~S~eeL~kQk~eL~~~l~~l 37 (101)
T 1d7m_A 17 KVSREQLIKQKDQLNSLLASL 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444333
No 271
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=47.89 E-value=2.2e+02 Score=28.63 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 369 RLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 369 ~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
+++.++.....|.+++.+.......|+..|........++.+++..|
T Consensus 199 e~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 245 (373)
T 3hhm_B 199 EIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSI 245 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 55667777888888888888888888888887777666666666644
No 272
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=47.78 E-value=84 Score=30.06 Aligned_cols=80 Identities=13% Similarity=0.114 Sum_probs=48.9
Q ss_pred ChHhHHHHHHHHHHhhhcCCC--eEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010658 15 DLQDGYRTLDWTIRKWKAQSI--SIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSKYLGFCG 92 (505)
Q Consensus 15 S~~~S~~AL~WAl~~~~~~g~--~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~ 92 (505)
++. +..||..|+++.-..|. .|++|.+=++. +.+.+..+..
T Consensus 36 np~-d~~ale~A~~Lke~~g~~~~V~av~~G~~~---------------------------------~~~~lr~ala--- 78 (264)
T 1o97_C 36 NEW-DDFSLEEAMKIKESSDTDVEVVVVSVGPDR---------------------------------VDESLRKCLA--- 78 (264)
T ss_dssp CHH-HHHHHHHHHHHHHHCSSCCEEEEEEESCGG---------------------------------GHHHHHHHHH---
T ss_pred CHH-HHHHHHHHHHHHHhcCCCceEEEEEeCchh---------------------------------HHHHHHHHHh---
Confidence 455 78899999887654455 78888772110 1123333322
Q ss_pred cCccEEEEEecC----CCC---hHHHHHHHHHHcCCCEEEEccCCCC
Q 010658 93 KVKAEILKVEKS----DEP---VHKLILDLVSRLTITKLVMGLSFMI 132 (505)
Q Consensus 93 ~v~ve~~vve~~----~~d---~~~~Ive~a~~~~idlLVmGs~g~~ 132 (505)
.++...++..+ +.+ .+..|..++++.+.|+|++|.+...
T Consensus 79 -~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d 124 (264)
T 1o97_C 79 -KGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSD 124 (264)
T ss_dssp -TTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTT
T ss_pred -cCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 24443333221 112 4678899999999999999998754
No 273
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=46.91 E-value=1e+02 Score=24.21 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHH
Q 010658 382 NKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIE 427 (505)
Q Consensus 382 ~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e 427 (505)
.++......+..+|.+|.......+...+++..|...+-.+-.+|.
T Consensus 28 ~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIa 73 (86)
T 1x8y_A 28 RERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIH 73 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3444555566666666666655665666666666666544444443
No 274
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=46.33 E-value=1e+02 Score=26.55 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=18.0
Q ss_pred HhhhhHHHHHhHHHHHHHHHHHHHHHHHHH
Q 010658 331 LESLTKEDVASRMEIQRDLDSLKEQSCEVI 360 (505)
Q Consensus 331 ~e~~~~~e~~~R~e~ee~l~~eke~~e~~~ 360 (505)
+-..+.+|-.+|.++|....+--.++|.+-
T Consensus 51 L~~~l~eE~~~R~~aE~~~~~ie~ElE~LT 80 (135)
T 2e7s_A 51 LREDIAKENELRTKAEEEADKLNKEVEDLT 80 (135)
T ss_dssp HHHHHHHTTSHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445666667777766666666666544
No 275
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=44.88 E-value=53 Score=33.59 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHHH
Q 010658 378 SELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFCK 430 (505)
Q Consensus 378 ~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e~~~ 430 (505)
.+|+.++......+.++++++..+..+..++.+++.+.+..|+.+..++.+++
T Consensus 6 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elk 58 (403)
T 4etp_A 6 AALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELR 58 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34444455555555566666666555666666666666666666666666653
No 276
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=44.62 E-value=1.9e+02 Score=27.30 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHcCCCEEEEccCCCC
Q 010658 108 VHKLILDLVSRLTITKLVMGLSFMI 132 (505)
Q Consensus 108 ~~~~Ive~a~~~~idlLVmGs~g~~ 132 (505)
.+..|..++++.+.|+|++|.....
T Consensus 101 ~a~~La~~i~~~~~dlVl~G~~s~d 125 (252)
T 1efp_B 101 VAKILAAVARAEGTELIIAGKQAID 125 (252)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTT
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccC
Confidence 4678889999999999999998754
No 277
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=44.07 E-value=69 Score=32.34 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=27.1
Q ss_pred CCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEee
Q 010658 4 EEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTY 44 (505)
Q Consensus 4 ~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~ 44 (505)
...+|+|++-|-.. |--++.++.+ .|..|+.||+..
T Consensus 8 ~~~kVlVa~SGGvD-Ssv~a~lL~~----~G~~V~~v~~~~ 43 (376)
T 2hma_A 8 SKTRVVVGMSGGVD-SSVTALLLKE----QGYDVIGIFMKN 43 (376)
T ss_dssp GGSEEEEECCSSHH-HHHHHHHHHH----TTCEEEEEEEEC
T ss_pred CCCeEEEEEeCHHH-HHHHHHHHHH----cCCcEEEEEEEC
Confidence 35799999999997 8766655433 477899999843
No 278
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=43.44 E-value=96 Score=24.07 Aligned_cols=41 Identities=22% Similarity=0.191 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 375 ELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
.+..+|+.+++-.+..+.+|...+.....++..+..++..|
T Consensus 14 ~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L 54 (78)
T 3efg_A 14 ARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHL 54 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666666666666666665555544444444444
No 279
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=43.07 E-value=1.8e+02 Score=27.65 Aligned_cols=25 Identities=12% Similarity=0.295 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHcCCCEEEEccCCCC
Q 010658 108 VHKLILDLVSRLTITKLVMGLSFMI 132 (505)
Q Consensus 108 ~~~~Ive~a~~~~idlLVmGs~g~~ 132 (505)
.++.|..++++.+.|+|++|.....
T Consensus 104 ~A~~La~~i~~~~~dlVl~G~~s~d 128 (255)
T 1efv_B 104 VARVLAKLAEKEKVDLVLLGKQAID 128 (255)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTT
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccC
Confidence 4678889999999999999998754
No 280
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=41.80 E-value=36 Score=24.54 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 354 EQSCEVIRDVEESKNRLSSLIELQSELSNK 383 (505)
Q Consensus 354 e~~e~~~~~~~~~~~~l~~~~~~~~~l~~~ 383 (505)
.+++.++.+.++++.+...+..+..+|.++
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555444444444444
No 281
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=41.30 E-value=1.2e+02 Score=23.30 Aligned_cols=29 Identities=7% Similarity=0.262 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 344 EIQRDLDSLKEQSCEVIRDVEESKNRLSS 372 (505)
Q Consensus 344 e~ee~l~~eke~~e~~~~~~~~~~~~l~~ 372 (505)
++|+.+..-+++++..+.+.+..+.+|..
T Consensus 18 ~Le~~v~~le~~Le~s~~~q~~~~~Elk~ 46 (72)
T 3cve_A 18 DLEGQLSEMEQRLEKSQSEQDAFRSNLKT 46 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555555443
No 282
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=40.37 E-value=93 Score=32.43 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=56.5
Q ss_pred CCCCEEEEEecCChHh-HHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHH
Q 010658 3 TEEPKVYVAVGNDLQD-GYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTD 81 (505)
Q Consensus 3 ~~~~kIlVAVDgS~~~-S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 81 (505)
+....++|=+-++-.- =..||..|++ .++.|+.|.|.+|.. +-....+..+. ...- ..-..
T Consensus 3 m~~~~~l~WfrrDLRl~DN~aL~~A~~----~~~~v~~vfi~dp~~---~~~~~~~~~~~---~~~r--------~~Fl~ 64 (489)
T 1np7_A 3 HVPPTVLVWFRNDLRLHDHEPLHRALK----SGLAITAVYCYDPRQ---FAQTHQGFAKT---GPWR--------SNFLQ 64 (489)
T ss_dssp CCCCEEEEEESSCCCSTTCHHHHHHHH----TTSEEEEEEEECGGG---GSBCTTSCBSS---CHHH--------HHHHH
T ss_pred CCCCcEEEEeCCCCCcchHHHHHHHHh----cCCCEEEEEEECchh---hcccccccCCC---CHHH--------HHHHH
Confidence 3344555555544210 1246666654 456788899988742 11000011111 1110 11122
Q ss_pred HHHHHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEc
Q 010658 82 NLLSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMG 127 (505)
Q Consensus 82 ~lL~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmG 127 (505)
+-|..+..-+++.+....+..| ++.+.|.+++++++|+.|+.=
T Consensus 65 ~sL~~L~~~L~~~G~~L~v~~g---~~~~~l~~l~~~~~~~~V~~~ 107 (489)
T 1np7_A 65 QSVQNLAESLQKVGNKLLVTTG---LPEQVIPQIAKQINAKTIYYH 107 (489)
T ss_dssp HHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEEC---CHHHHHHHHHHHcCCCEEEEe
Confidence 2333343334455677777776 899999999999999998875
No 283
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=39.05 E-value=1.4e+02 Score=23.37 Aligned_cols=30 Identities=13% Similarity=0.268 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 344 EIQRDLDSLKEQSCEVIRDVEESKNRLSSL 373 (505)
Q Consensus 344 e~ee~l~~eke~~e~~~~~~~~~~~~l~~~ 373 (505)
++|+.+..-..+++..+.+.+.++.+|..+
T Consensus 24 ~Le~~v~~le~~Le~s~~~q~~~~~Elk~l 53 (79)
T 3cvf_A 24 ELEHQLRAMERSLEEARAERERARAEVGRA 53 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555555555433
No 284
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=38.53 E-value=75 Score=32.61 Aligned_cols=9 Identities=22% Similarity=0.051 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q 010658 391 KGHAEAQLE 399 (505)
Q Consensus 391 ~~e~e~~l~ 399 (505)
+.+++++|.
T Consensus 33 ~~~~~~~l~ 41 (412)
T 3u06_A 33 LETCKEQLF 41 (412)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 285
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=38.39 E-value=1.8e+02 Score=24.43 Aligned_cols=12 Identities=17% Similarity=0.423 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHH
Q 010658 289 MKSKINEAREMI 300 (505)
Q Consensus 289 l~~~l~ea~~~~ 300 (505)
|..+|-+|++..
T Consensus 30 Lq~qLTqAQe~l 41 (121)
T 3mq7_A 30 LQQELTEAQKGF 41 (121)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455555555433
No 286
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=38.08 E-value=77 Score=33.46 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=27.7
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
.++|+|++.|-.. |--++.++.+.+ |..|+.|||.
T Consensus 227 ~~~vvvalSGGvD-Ssv~a~ll~~a~---G~~v~av~v~ 261 (525)
T 1gpm_A 227 DDKVILGLSGGVD-SSVTAMLLHRAI---GKNLTCVFVD 261 (525)
T ss_dssp TCEEEEECCSSHH-HHHHHHHHHHHH---GGGEEEEEEE
T ss_pred ccceEEEecCCCC-HHHHHHHHHHHh---CCCEEEEEEe
Confidence 4789999999987 887777776643 4678999994
No 287
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=37.40 E-value=1.7e+02 Score=28.38 Aligned_cols=33 Identities=3% Similarity=0.022 Sum_probs=24.5
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEe
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVT 43 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~ 43 (505)
..+++|++.| .. |--|+-++ ...|..|+.+|..
T Consensus 179 ~~kvlvllSG-vD-S~vaa~ll----~~~G~~v~~v~~~ 211 (307)
T 1vbk_A 179 EGRMIGILHD-EL-SALAIFLM----MKRGVEVIPVYIG 211 (307)
T ss_dssp TCEEEEECSS-HH-HHHHHHHH----HHBTCEEEEEEES
T ss_pred CCcEEEEEeC-Cc-HHHHHHHH----HhCCCeEEEEEEE
Confidence 3689999999 87 76554443 3458899999984
No 288
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=37.01 E-value=3.7e+02 Score=27.72 Aligned_cols=22 Identities=5% Similarity=-0.011 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 010658 387 STMAKGHAEAQLEKAVIARAEI 408 (505)
Q Consensus 387 ~~~~~~e~e~~l~~~~~~~~~~ 408 (505)
.+....+.+..+..+...++.+
T Consensus 215 ~n~~~~~y~~~~~~~~~~lQ~l 236 (486)
T 3haj_A 215 LDQGTPQYMENMEQVFEQCQQF 236 (486)
T ss_dssp HHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444444444
No 289
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=36.67 E-value=1.7e+02 Score=23.75 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 363 VEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLE 399 (505)
Q Consensus 363 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~ 399 (505)
+..+...|.....+....+.+....+..+.+|-+.|.
T Consensus 28 ~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLF 64 (97)
T 2eqb_B 28 VKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLF 64 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444445555555555555555555554
No 290
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=35.37 E-value=1.2e+02 Score=29.60 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=19.2
Q ss_pred ChHHHHHHHHHHc-CCCEEEEccCCC
Q 010658 107 PVHKLILDLVSRL-TITKLVMGLSFM 131 (505)
Q Consensus 107 d~~~~Ive~a~~~-~idlLVmGs~g~ 131 (505)
...+++.++.+.. +++.|++|.+.-
T Consensus 143 ~l~~~~~~~~k~~p~~~aii~G~Rrd 168 (306)
T 2wsi_A 143 NMADAFRDFIKIYPETEAIVIGIRHT 168 (306)
T ss_dssp CHHHHHHHHHHHCTTCCEEECCCCCC
T ss_pred cHHHHHHHHHhhCCCCcEEEEEEecc
Confidence 4667777887774 789999999863
No 291
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=35.23 E-value=88 Score=31.97 Aligned_cols=41 Identities=7% Similarity=-0.031 Sum_probs=30.8
Q ss_pred HHHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEc
Q 010658 84 LSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMG 127 (505)
Q Consensus 84 L~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmG 127 (505)
|..+..-+++.++...+..| ++.+.|.+++++++|+.|+.-
T Consensus 54 L~~l~~~L~~~g~~l~~~~g---~~~~~l~~l~~~~~~~~v~~~ 94 (420)
T 2j07_A 54 VRALREAYRARGGALWVLEG---LPWEKVPEAARRLKAKAVYAL 94 (420)
T ss_dssp HHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHHHcCCCEEEEe
Confidence 33344444455677777776 899999999999999999884
No 292
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=35.16 E-value=1.7e+02 Score=23.44 Aligned_cols=24 Identities=8% Similarity=0.034 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 392 GHAEAQLEKAVIARAEIVKDIEEL 415 (505)
Q Consensus 392 ~e~e~~l~~~~~~~~~~~~~~~~l 415 (505)
.+++.++.+.-.+..-....+++|
T Consensus 70 ~e~~dE~~Sl~~q~~~~~~qLdkL 93 (96)
T 3q8t_A 70 LELDDELKSVENQMRYAQMQLDKL 93 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333333333333333333
No 293
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=34.20 E-value=3.4e+02 Score=26.47 Aligned_cols=39 Identities=15% Similarity=0.243 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHHHh
Q 010658 389 MAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFCKE 431 (505)
Q Consensus 389 ~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e~~~~ 431 (505)
..+..+...|++ -.++..+++++-.++.....+++.+..
T Consensus 66 ~v~~~mq~~Le~----Ere~~~~Rd~~a~~k~~Le~~ierLs~ 104 (302)
T 3ibp_A 66 DVTEYLQQLLER----EREAIVERDEVGARKNAVDEEIERLSQ 104 (302)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344444444442 145666677777777777777877654
No 294
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=33.93 E-value=1.7e+02 Score=22.92 Aligned_cols=20 Identities=15% Similarity=0.247 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 010658 377 QSELSNKLQLSTMAKGHAEA 396 (505)
Q Consensus 377 ~~~l~~~~~~~~~~~~e~e~ 396 (505)
+..++++++++...-.++..
T Consensus 40 ni~~eskL~eae~rn~eL~~ 59 (81)
T 1wt6_A 40 NQNFASQLREAEARNRDLEA 59 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444344333
No 295
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=33.75 E-value=1.1e+02 Score=31.30 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 010658 344 EIQRDLDSLKEQSCEVIRDVE 364 (505)
Q Consensus 344 e~ee~l~~eke~~e~~~~~~~ 364 (505)
++++.|...+++.+++.++..
T Consensus 7 ~l~~el~~~~~~~~~l~~~~~ 27 (412)
T 3u06_A 7 ALSTEVVHLRQRTEELLRCNE 27 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444443333333
No 296
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=33.71 E-value=77 Score=33.68 Aligned_cols=41 Identities=7% Similarity=0.139 Sum_probs=30.6
Q ss_pred HHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEcc
Q 010658 85 SKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGL 128 (505)
Q Consensus 85 ~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs 128 (505)
..+..-+.+.+...++..| +|.+.|.+++++++|+.|+.-.
T Consensus 71 ~~L~~~L~~~G~~L~v~~G---~~~~vl~~L~~~~~~~~V~~n~ 111 (537)
T 3fy4_A 71 KDLDSSLKKLGSRLLVFKG---EPGEVLVRCLQEWKVKRLCFEY 111 (537)
T ss_dssp HHHHHHHHHTTCCCEEEES---CHHHHHHHHHTTSCEEEEEECC
T ss_pred HHHHHHHHHcCCceEEEEC---CHHHHHHHHHHHcCCCEEEEec
Confidence 3333334455666777776 8999999999999999998844
No 297
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=33.42 E-value=3.1e+02 Score=25.76 Aligned_cols=26 Identities=12% Similarity=0.187 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 345 IQRDLDSLKEQSCEVIRDVEESKNRL 370 (505)
Q Consensus 345 ~ee~l~~eke~~e~~~~~~~~~~~~l 370 (505)
....|.+.|...+..-++.+.+...+
T Consensus 135 ~~~~l~KaK~~Y~~~~~e~e~a~~~~ 160 (305)
T 2efl_A 135 CWKQLESSKRRFERDCKEADRAQQYF 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555554443
No 298
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=33.24 E-value=2e+02 Score=23.60 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHhHh
Q 010658 406 AEIVKDIEELRRQRD 420 (505)
Q Consensus 406 ~~~~~~~~~l~~~r~ 420 (505)
..+...++.+...|+
T Consensus 85 ~~l~~~~~~l~~Ek~ 99 (107)
T 2no2_A 85 ANWAAEFAELEKERD 99 (107)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444445555444
No 299
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=32.86 E-value=3.4e+02 Score=26.15 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHHHhhhhHHHHhhhh
Q 010658 284 ERTEFMKSKINEAREMIRLKKKETKDDAERCAKAKWAICLCNSRADQLESLT 335 (505)
Q Consensus 284 e~~~~l~~~l~ea~~~~~~~r~~~~~~~~~~~kae~~~~~~~~~~~~~e~~~ 335 (505)
..+++.|++|++.-.-.+.+-.+|+..+ +++......+++++|.+.
T Consensus 108 ~e~ek~RK~~Ke~w~r~eKk~~dae~~l------~KAK~~Y~~r~ee~ekak 153 (279)
T 3qwe_A 108 TEIEKWRKEFKEQWMKEQKRMNEAVQAL------RRAQLQYVQRSEDLRARS 153 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHh
Confidence 3466778888888776654455555554 223334455666666543
No 300
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=32.19 E-value=1.8e+02 Score=22.75 Aligned_cols=10 Identities=10% Similarity=0.707 Sum_probs=3.8
Q ss_pred HHHHHHHHHH
Q 010658 347 RDLDSLKEQS 356 (505)
Q Consensus 347 e~l~~eke~~ 356 (505)
+.|.+.|...
T Consensus 31 EELs~vr~~n 40 (81)
T 1wt6_A 31 REMEAIRTDN 40 (81)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 301
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=31.94 E-value=2.6e+02 Score=24.50 Aligned_cols=37 Identities=11% Similarity=0.030 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 346 QRDLDSLKEQSCEVIRDVEESKNRLSSLIELQSELSN 382 (505)
Q Consensus 346 ee~l~~eke~~e~~~~~~~~~~~~l~~~~~~~~~l~~ 382 (505)
+..++..+.++.++..++.+..+.++.+++....|.-
T Consensus 74 ~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLql 110 (152)
T 3a7p_A 74 QKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTI 110 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444444443
No 302
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=31.94 E-value=89 Score=25.68 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 346 QRDLDSLKEQSCEVIRDVEESKNRLS 371 (505)
Q Consensus 346 ee~l~~eke~~e~~~~~~~~~~~~l~ 371 (505)
|+.++..+.++.+-.++++..+..+.
T Consensus 43 eE~~aql~Re~~eK~re~e~~Kr~~~ 68 (103)
T 4h22_A 43 EEQLAESRRQYEEKNKEFEREKHAHS 68 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444433333
No 303
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=31.81 E-value=4.6e+02 Score=27.24 Aligned_cols=20 Identities=25% Similarity=0.273 Sum_probs=9.3
Q ss_pred ccHHHHHHHhhccccccccc
Q 010658 451 YAAEDIRLATEDFSERFRLK 470 (505)
Q Consensus 451 ~s~~el~~AT~~Fs~~~~iG 470 (505)
.+..+|...-...+....|-
T Consensus 214 ~dC~di~~~g~~~SGvY~I~ 233 (464)
T 1m1j_B 214 RECEDIYRKGGETSEMYIIQ 233 (464)
T ss_dssp SSHHHHHHTTCCSCEEEEEC
T ss_pred CCHHHHHhcCCCCCeeEEEE
Confidence 35667665433333334443
No 304
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=31.73 E-value=3.3e+02 Score=25.66 Aligned_cols=60 Identities=13% Similarity=-0.005 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010658 359 VIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQ 418 (505)
Q Consensus 359 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~ 418 (505)
++++.+.+..+|..+--++....+.|.+.+..|..|...-.....-++.+.++=-.|+..
T Consensus 154 Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~e 213 (242)
T 3uux_B 154 LKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDN 213 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 555556666666666666666666666666555555555544444444444444444333
No 305
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=31.55 E-value=1.4e+02 Score=28.17 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=24.3
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEE
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHV 42 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV 42 (505)
.+|+|++-|... |.-.|.-+.+.... +..|.++|+
T Consensus 42 ~~v~va~SGGkD-S~vLL~ll~~~~~~-~~~i~vv~i 76 (261)
T 2oq2_A 42 PHLFQTTAFGLT-GLVTIDMLSKLSEK-YYMPELLFI 76 (261)
T ss_dssp SSEEEECCCCHH-HHHHHHHHHHHTTT-SCCCEEEEE
T ss_pred CCEEEEecCCHH-HHHHHHHHHHhCcc-CCCeeEEEe
Confidence 479999999887 87555555444432 446788888
No 306
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=30.78 E-value=2.4e+02 Score=23.64 Aligned_cols=8 Identities=13% Similarity=0.343 Sum_probs=4.1
Q ss_pred HHhhHHHH
Q 010658 304 KKETKDDA 311 (505)
Q Consensus 304 r~~~~~~~ 311 (505)
.++|.+.+
T Consensus 10 SeAC~dGL 17 (121)
T 3mq7_A 10 SEAARDGL 17 (121)
T ss_dssp -CHHHHHH
T ss_pred cHHHHHHH
Confidence 45566665
No 307
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=30.39 E-value=1.4e+02 Score=25.72 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 010658 389 MAKGHAEAQLEKAVIARAEIVKDIEELRRQRD 420 (505)
Q Consensus 389 ~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~ 420 (505)
..+..+..+...|..++.+.+...++|++.|.
T Consensus 45 ~E~q~~~~kk~~Aekql~~Ake~~eKlkKKrs 76 (136)
T 3ter_A 45 NEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQG 76 (136)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHHHHHhhh
Confidence 33445555555666666667777777777763
No 308
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=30.14 E-value=1.7e+02 Score=30.79 Aligned_cols=41 Identities=10% Similarity=0.006 Sum_probs=30.0
Q ss_pred HHHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEc
Q 010658 84 LSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMG 127 (505)
Q Consensus 84 L~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmG 127 (505)
|..+..-+++.+....+..| ++.+.|.+++++++|+.|+.=
T Consensus 102 L~~L~~~L~~~G~~L~v~~g---~~~~~l~~l~~~~~~~~V~~~ 142 (525)
T 2j4d_A 102 LVDLRKNLMKRGLNLLIRSG---KPEEILPSLAKDFGARTVFAH 142 (525)
T ss_dssp HHHHHHHHHHTTCCCEEEES---CHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEeC---CHHHHHHHHHHHcCCCEEEEe
Confidence 33333334445666666666 899999999999999999885
No 309
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=30.12 E-value=2e+02 Score=27.00 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=47.7
Q ss_pred CEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHHH
Q 010658 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLS 85 (505)
Q Consensus 6 ~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL~ 85 (505)
.||+|++.|-.. |-.|+-++.+ .|-.|+.|+..-+.. .... .+.. .. ++
T Consensus 5 MKvvvl~SGGkD-Ss~al~~l~~----~G~eV~~L~~~~~~~----~~s~--~~h~--~~------------------~e 53 (237)
T 3rjz_A 5 ADVAVLYSGGKD-SNYALYWAIK----NRFSVKFLVTMVSEN----EESY--MYHT--IN------------------AN 53 (237)
T ss_dssp SEEEEECCSSHH-HHHHHHHHHH----TTCEEEEEEEEECC--------------C--CS------------------SS
T ss_pred CEEEEEecCcHH-HHHHHHHHHH----cCCeEEEEEEEcCCC----CCcc--ccCC--cc------------------HH
Confidence 589999999997 8877777654 466777776543321 0000 0000 00 00
Q ss_pred HHHhhhc--cCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCC
Q 010658 86 KYLGFCG--KVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSF 130 (505)
Q Consensus 86 ~~~~~c~--~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g 130 (505)
.+...|. ++....+-+.+..++=-+.+.++.++.+|+.+|.|.-.
T Consensus 54 ~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~Gdi~ 100 (237)
T 3rjz_A 54 LTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVAGALA 100 (237)
T ss_dssp HHHHHHHHHTCCEEEEEC------CHHHHHHHHTTSCCSEEECC---
T ss_pred HHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEECCcc
Confidence 1122344 44433333333212234667777788899999999854
No 310
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=29.89 E-value=2e+02 Score=22.55 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=18.8
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSLK 353 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~ek 353 (505)
-+..+...|-.|+..|..+|..+..-|
T Consensus 29 ~~edfk~KyE~E~~~R~~~E~d~~~Lr 55 (86)
T 3swk_A 29 DIMRLREKLQEEMLQREEAENTLQSFR 55 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667778888888888886554444
No 311
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=29.19 E-value=47 Score=30.58 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=26.9
Q ss_pred CCCCCCEEEEEecCChHhHH-HHHHHHHHhhhcCCCeEEEE
Q 010658 1 MDTEEPKVYVAVGNDLQDGY-RTLDWTIRKWKAQSISIVIL 40 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~-~AL~WAl~~~~~~g~~Ivll 40 (505)
|.-.+++|+|+|-||-. +. ++++.. +.+...|..|.++
T Consensus 3 m~l~~k~I~lgiTGs~a-a~~k~~~ll-~~L~~~g~eV~vv 41 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHC-TYHEVLPQM-ERLVELGAKVTPF 41 (201)
T ss_dssp CCCTTCEEEEECCSCGG-GGGGTHHHH-HHHHHTTCEEEEE
T ss_pred CCcCCCEEEEEEEChHH-HHHHHHHHH-HHHhhCCCEEEEE
Confidence 66678999999999987 77 777654 4555567664443
No 312
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=28.39 E-value=1.4e+02 Score=20.33 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 010658 378 SELSNKLQLSTMAKGHAEAQLEK 400 (505)
Q Consensus 378 ~~l~~~~~~~~~~~~e~e~~l~~ 400 (505)
.+|+.+.++.+....|||.++..
T Consensus 6 ~eLE~r~k~le~~naeLEervst 28 (42)
T 2oqq_A 6 SELENRVKDLENKNSELEERLST 28 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666667777777777664
No 313
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=27.31 E-value=2.2e+02 Score=22.12 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHH
Q 010658 382 NKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIE 427 (505)
Q Consensus 382 ~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e 427 (505)
.++......+..+|.+|..+....+...+++..|...+-.+-.+|.
T Consensus 26 ~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIa 71 (84)
T 1gk4_A 26 VEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIA 71 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3445556666677777776666666666777777666654444443
No 314
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=27.12 E-value=3.4e+02 Score=24.20 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 010658 351 SLKEQSCEVIRDVEE---------SKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRD 420 (505)
Q Consensus 351 ~eke~~e~~~~~~~~---------~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~ 420 (505)
--+..+.+++.+.|. .+.=+..+.++...++.++.+....+......|..+...+....++.+++...|+
T Consensus 52 h~~~k~~qlre~~d~gtt~~~i~~m~~yI~llrErea~lEqkVaeq~e~Ve~e~q~Le~ar~el~qArke~eKfelHrq 130 (169)
T 3k29_A 52 HYMQKIRQLREQLDDGTTSDAILKMKAYIKVVAIQLSEEEEKVNKQKENVLAASKELERAEVELTKRRKEEEKTRLHKE 130 (169)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566655553 2222333667778888888888888888888888888888888888887766555
No 315
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=26.92 E-value=1.8e+02 Score=30.78 Aligned_cols=85 Identities=7% Similarity=0.010 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhc--CCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHhhhccCccEE
Q 010658 21 RTLDWTIRKWKA--QSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSKYLGFCGKVKAEI 98 (505)
Q Consensus 21 ~AL~WAl~~~~~--~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~~v~ve~ 98 (505)
.||..|++.... .+..|+.|.|.+|.. . .. .+. ...- ..-..+-|..+..-+++.+...
T Consensus 45 ~aL~~A~~~~~~~~~~~pv~~vfi~dp~~----~-~~---~~~---~~~r--------~~Fl~~sL~~L~~~L~~~G~~L 105 (543)
T 2wq7_A 45 PALSHIFTAANAAPGRYFVRPIFILDPGI----L-DW---MQV---GANR--------WRFLQQTLEDLDNQLRKLNSRL 105 (543)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEEEEECTTG----G-GC---TTS---CHHH--------HHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCccccCCCeEEEEEEECchh----h-cc---cCC---CHHH--------HHHHHHHHHHHHHHHHHCCCeE
Confidence 578888776543 344588899988742 1 10 111 1110 1111222333333344456666
Q ss_pred EEEecCCCChHHHHHHHHHHcCCCEEEEc
Q 010658 99 LKVEKSDEPVHKLILDLVSRLTITKLVMG 127 (505)
Q Consensus 99 ~vve~~~~d~~~~Ive~a~~~~idlLVmG 127 (505)
.++.| ++.+.|.+++++++|+.|+.=
T Consensus 106 ~v~~g---~~~~~l~~l~~~~~~~~v~~~ 131 (543)
T 2wq7_A 106 FVVRG---KPAEVFPRIFKSWRVEMLTFE 131 (543)
T ss_dssp EEEES---CHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEeC---CHHHHHHHHHHHcCCCEEEEe
Confidence 66766 899999999999999999885
No 316
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=26.85 E-value=5.2e+02 Score=26.31 Aligned_cols=26 Identities=12% Similarity=-0.066 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 374 IELQSELSNKLQLSTMAKGHAEAQLE 399 (505)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~e~e~~l~ 399 (505)
.+++..|+..+......+..|+..+.
T Consensus 90 l~~~~~~e~~~~~~~~~i~~l~~~~~ 115 (409)
T 1m1j_C 90 IEEIIRYENTILAHENTIQQLTDMHI 115 (409)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 33344444444444444445555444
No 317
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=26.79 E-value=2.1e+02 Score=22.07 Aligned_cols=44 Identities=18% Similarity=-0.007 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 010658 379 ELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVL 422 (505)
Q Consensus 379 ~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~ 422 (505)
.++.++.+.+..+...+.-++.--.......++++.|+++=+.+
T Consensus 11 ~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L 54 (78)
T 3efg_A 11 ELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHL 54 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666655554444455555555555554433
No 318
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=26.22 E-value=2.6e+02 Score=22.54 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 379 ELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDI 412 (505)
Q Consensus 379 ~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~ 412 (505)
.|+.++......++.++.++......+.+++..+
T Consensus 74 ~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l 107 (117)
T 2zqm_A 74 ELKEKIETLEVRLNALERQEKKLNEKLKELTAQI 107 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444445555555544333333343333
No 319
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=26.15 E-value=1.1e+02 Score=21.78 Aligned_cols=41 Identities=10% Similarity=0.076 Sum_probs=23.7
Q ss_pred hHHHHhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 327 RADQLESLTKEDVASRMEIQRDLDSLKEQSCEVIRDVEESK 367 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~ 367 (505)
+|+.+|.+..+=-+.-..+|+.|..+|++...+..++|...
T Consensus 6 ~aefAERsV~KLek~ID~LEdeL~~eKek~~~i~~eLD~tl 46 (52)
T 2z5i_A 6 KNYHLENEVARLKKLVDDLEDELYAQKLKYKAISEELDHAL 46 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44444443322222334567778888888877777766543
No 320
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=25.33 E-value=82 Score=29.15 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=27.0
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEE
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILH 41 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllH 41 (505)
|.. .++|+|+|-|+-. +.++++.. +.+.+.|..|.++-
T Consensus 1 m~~-~k~IllgvTGaia-a~k~~~ll-~~L~~~g~eV~vv~ 38 (209)
T 3zqu_A 1 MSG-PERITLAMTGASG-AQYGLRLL-DCLVQEEREVHFLI 38 (209)
T ss_dssp CCS-CSEEEEEECSSSC-HHHHHHHH-HHHHHTTCEEEEEE
T ss_pred CCC-CCEEEEEEECHHH-HHHHHHHH-HHHHHCCCEEEEEE
Confidence 443 4899999999997 88888764 44555676655543
No 321
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=24.13 E-value=62 Score=29.99 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=26.4
Q ss_pred CCCCCCEEEEEecCChHhHHH-HHHHHHHhhhcCCCeEEEEE
Q 010658 1 MDTEEPKVYVAVGNDLQDGYR-TLDWTIRKWKAQSISIVILH 41 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~-AL~WAl~~~~~~g~~IvllH 41 (505)
|.-.+++|+|+|-||.. +.+ ++++ ++.+...|..|.+|-
T Consensus 1 m~l~~k~IllgiTGsia-ayk~~~~l-l~~L~~~g~eV~vv~ 40 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGSHC-TYEEVMPH-LEKLIAEGAEVRPVV 40 (207)
T ss_dssp -CCTTCEEEEEECSCGG-GGTTSHHH-HHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEEEEChHH-HHHHHHHH-HHHHHhCCCEEEEEE
Confidence 55567999999999976 665 6665 455555677655443
No 322
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=24.05 E-value=1.9e+02 Score=23.35 Aligned_cols=8 Identities=13% Similarity=0.368 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 010658 392 GHAEAQLE 399 (505)
Q Consensus 392 ~e~e~~l~ 399 (505)
..++..+.
T Consensus 73 ~~L~~~~e 80 (117)
T 2zqm_A 73 AELKEKIE 80 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 323
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=23.24 E-value=3.2e+02 Score=22.64 Aligned_cols=43 Identities=14% Similarity=0.231 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Q 010658 357 CEVIRDVEESKNRLSSLIELQSELS-------NKLQLSTMAKGHAEAQLE 399 (505)
Q Consensus 357 e~~~~~~~~~~~~l~~~~~~~~~l~-------~~~~~~~~~~~e~e~~l~ 399 (505)
..++..+++++.+..........++ +.+.+..+...+||.++.
T Consensus 44 dn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~ie 93 (119)
T 3ol1_A 44 DNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVE 93 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHH
Confidence 3344455555555544333333333 333344444444444444
No 324
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=23.01 E-value=1.5e+02 Score=23.61 Aligned_cols=41 Identities=2% Similarity=0.040 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 355 QSCEVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAE 395 (505)
Q Consensus 355 ~~e~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e 395 (505)
++++...+......+++.+..++..++.++.+...+..+++
T Consensus 2 ~~Q~~i~~f~~lq~~~~~l~~q~~~l~~~~~e~~~~~~EL~ 42 (107)
T 1fxk_A 2 NVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELS 42 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 325
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=22.22 E-value=5.3e+02 Score=24.75 Aligned_cols=134 Identities=10% Similarity=0.103 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHHHHHHHHHHhhhhHHHHhhhhHHH--------HHhHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 293 INEAREMIRLKKKETKDDAERCAKAKWAICLCNSRADQLESLTKED--------VASRMEIQRDLDSLKEQSCEVIRDVE 364 (505)
Q Consensus 293 l~ea~~~~~~~r~~~~~~~~~~~kae~~~~~~~~~~~~~e~~~~~e--------~~~R~e~ee~l~~eke~~e~~~~~~~ 364 (505)
+..++..+ +.+.+..+.-|.+ -+..+...-++.+..+..+- .+.|++++..+.+....+.....+++
T Consensus 77 l~~aw~~~---~~e~e~~a~~H~~--~a~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~ 151 (337)
T 2x3v_A 77 LERAWGAM---MTEADKVSELHQE--VKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELE 151 (337)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHH--HHHHHHHTHHHHHHHHHHHHCCBCSSCSBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHHHh
Q 010658 365 ESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFCKE 431 (505)
Q Consensus 365 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e~~~~ 431 (505)
+++......+........+.........--.+++.++........++..+.+..-..++...+..+.
T Consensus 152 KaKk~Y~~~c~e~e~a~~~~~~~~~~~~~s~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~ 218 (337)
T 2x3v_A 152 AAKKAYHLACKEERLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTP 218 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHhccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
No 326
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=22.18 E-value=3.1e+02 Score=22.10 Aligned_cols=19 Identities=11% Similarity=0.223 Sum_probs=9.0
Q ss_pred hHHHHhhhhHHHHHhHHHH
Q 010658 327 RADQLESLTKEDVASRMEI 345 (505)
Q Consensus 327 ~~~~~e~~~~~e~~~R~e~ 345 (505)
|+.+++..+.+|.+.|+-+
T Consensus 23 Ki~el~~ei~ke~~~regl 41 (98)
T 2ke4_A 23 QLEERSRELQKEVDQREAL 41 (98)
T ss_dssp HHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555444444444433
No 327
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=22.13 E-value=3.9e+02 Score=23.25 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 010658 358 EVIRDVEESKNRLSSLIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRD 420 (505)
Q Consensus 358 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~ 420 (505)
+.-.-+++...+|...++....|..-+.... ...+.++..+...+.+.+...+++...|.
T Consensus 79 eA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~---~~~~~~l~e~e~~leeyK~Kl~rv~~vkk 138 (152)
T 4fla_A 79 EACLLLAEYNGRLAAELEDRRQLARMLVEYT---QNQKDVLSEKEKKLEEYKQKLARVTQVRK 138 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444433333322222 33334444444444555555555554443
No 328
>3tvs_A Cryptochrome-1; circadian clock light entrainment, jetlag, phosphorylation, gene regulation, signaling protein; HET: TPO FAD; 2.30A {Drosophila melanogaster} PDB: 4gu5_A*
Probab=22.09 E-value=1.7e+02 Score=30.99 Aligned_cols=83 Identities=10% Similarity=0.031 Sum_probs=49.8
Q ss_pred HHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHhhhccC---ccE
Q 010658 21 RTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSKYLGFCGKV---KAE 97 (505)
Q Consensus 21 ~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~~v---~ve 97 (505)
.||..|++... .|..|+.|+|.+|.. .. ..+. ... ...-+.+-|.....-..+. +..
T Consensus 20 ~AL~~A~~~~~-~g~~vl~vfi~dp~~----~~----~~~~---~~~--------r~~Fl~~sL~~L~~~L~~~~~~G~~ 79 (538)
T 3tvs_A 20 PALLAALADKD-QGIALIPVFIFDGES----AG----TKNV---GYN--------RMRFLLDSLQDIDDQLQAATDGRGR 79 (538)
T ss_dssp HHHHTTTGGGT-TTCBCCEEEEECSSS----SC----STTC---CHH--------HHHHHHHHHHHHHHHGGGSCSSSSC
T ss_pred HHHHHHHHhCC-CCCCEEEEEecChhh----hc----cCCC---CHH--------HHHHHHHHHHHHHHHHHHhhcCCCe
Confidence 35666655432 333788999988742 11 0011 111 0111223344444444456 777
Q ss_pred EEEEecCCCChHHHHHHHHHHcCCCEEEE
Q 010658 98 ILKVEKSDEPVHKLILDLVSRLTITKLVM 126 (505)
Q Consensus 98 ~~vve~~~~d~~~~Ive~a~~~~idlLVm 126 (505)
.++..| +|.+.|.+++++++|+.|+.
T Consensus 80 L~v~~G---~~~~vl~~L~~~~~a~~V~~ 105 (538)
T 3tvs_A 80 LLVFEG---EPAYIFRRLHEQVRLHRICI 105 (538)
T ss_dssp CEEEES---CHHHHHHHHHHHHCEEEECE
T ss_pred EEEEeC---CHHHHHHHHHHHcCCCEEEE
Confidence 777776 79999999999999999986
No 329
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=21.94 E-value=4.9e+02 Score=24.30 Aligned_cols=134 Identities=15% Similarity=0.031 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHHHHHHHHHHhhhhHHHHhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 293 INEAREMIRLKKKETKDDAERCAKAKWAICLCNSRADQLESLTKEDVASRMEIQRDLDSLKEQSCEVIRDVEESKNRLSS 372 (505)
Q Consensus 293 l~ea~~~~~~~r~~~~~~~~~~~kae~~~~~~~~~~~~~e~~~~~e~~~R~e~ee~l~~eke~~e~~~~~~~~~~~~l~~ 372 (505)
+..++..+ ..+.+..+.-|.. -+..+...-++.+..+..+--+.||..++...+...++.....++++++.....
T Consensus 67 ~~~~w~~~---l~~~e~~a~~h~~--~a~~L~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~ 141 (301)
T 2efk_A 67 QQQSFVQI---LQEVNDFAGQREL--VAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFER 141 (301)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHH--HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHhHHHHHh
Q 010658 373 LIELQSELSNKLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFCKE 431 (505)
Q Consensus 373 ~~~~~~~l~~~~~~~~~~~~e~e~~l~~~~~~~~~~~~~~~~l~~~r~~~~~~~e~~~~ 431 (505)
.+.....+..+...+..-..--..++.++........+..++.+..-...+...+..+.
T Consensus 142 ~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~ 200 (301)
T 2efk_A 142 DCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQA 200 (301)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 330
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.84 E-value=3.3e+02 Score=25.04 Aligned_cols=88 Identities=10% Similarity=0.064 Sum_probs=52.0
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHH
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKT 80 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 80 (505)
|.....||.|=+.|+.. ...||-.++..- .+..|++|-..+|.. + +
T Consensus 1 ~~~~~~riavl~SG~Gs-nl~all~~~~~~--~~~eI~~Vis~~~~a------------------------~-------~ 46 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGT-NLQAIIGAIQKG--LAIEIRAVISNRADA------------------------Y-------G 46 (215)
T ss_dssp ---CCEEEEEEESSCCH-HHHHHHHHHHTT--CSEEEEEEEESCTTC------------------------H-------H
T ss_pred CCCCCcEEEEEEeCCcH-HHHHHHHHHHcC--CCCEEEEEEeCCcch------------------------H-------H
Confidence 55667789999999987 777887776542 244565554422210 0 0
Q ss_pred HHHHHHHHhhhccCccEEEEEecCC-CC---hHHHHHHHHHHcCCCEEEEccC
Q 010658 81 DNLLSKYLGFCGKVKAEILKVEKSD-EP---VHKLILDLVSRLTITKLVMGLS 129 (505)
Q Consensus 81 ~~lL~~~~~~c~~v~ve~~vve~~~-~d---~~~~Ive~a~~~~idlLVmGs~ 129 (505)
...|.+.++.+..+...+ .+ -...+++..+++++|+||+-.-
T Consensus 47 -------~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy 92 (215)
T 3tqr_A 47 -------LKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLAGF 92 (215)
T ss_dssp -------HHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEEESSC
T ss_pred -------HHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhcCCCEEEEccc
Confidence 123344566665543210 01 1357999999999999998554
No 331
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=21.42 E-value=3.4e+02 Score=22.21 Aligned_cols=24 Identities=25% Similarity=0.241 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 010658 360 IRDVEESKNRLSSLIELQSELSNK 383 (505)
Q Consensus 360 ~~~~~~~~~~l~~~~~~~~~l~~~ 383 (505)
..++|-++..|....+....+..+
T Consensus 29 ~YqVdlLKD~LEe~eE~~aql~Re 52 (103)
T 4h22_A 29 MYQVDTLKDMLLELEEQLAESRRQ 52 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555555444444444433
No 332
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=21.38 E-value=2.1e+02 Score=28.22 Aligned_cols=7 Identities=14% Similarity=0.036 Sum_probs=3.3
Q ss_pred EEEEEEc
Q 010658 487 SVAIKTL 493 (505)
Q Consensus 487 ~VAVK~L 493 (505)
+|.-.+.
T Consensus 114 tviQrR~ 120 (323)
T 1lwu_C 114 TVIQHRH 120 (323)
T ss_dssp EEEEEES
T ss_pred EEEEEcc
Confidence 4444444
No 333
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=21.24 E-value=3.7e+02 Score=25.18 Aligned_cols=15 Identities=27% Similarity=0.412 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHhHhH
Q 010658 407 EIVKDIEELRRQRDV 421 (505)
Q Consensus 407 ~~~~~~~~l~~~r~~ 421 (505)
+-.+...+++.+.|.
T Consensus 203 ~~~~~~~~~~~~~~~ 217 (228)
T 3q0x_A 203 QCRQQLAQLREQYDK 217 (228)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 344444455555543
No 334
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=21.12 E-value=5.3e+02 Score=24.39 Aligned_cols=18 Identities=6% Similarity=0.171 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010658 349 LDSLKEQSCEVIRDVEES 366 (505)
Q Consensus 349 l~~eke~~e~~~~~~~~~ 366 (505)
|.+.|...+..-++.+.+
T Consensus 159 l~KaK~~Y~~~c~e~e~a 176 (312)
T 3abh_A 159 VEAAKKAHHAACKEEKLA 176 (312)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444433
No 335
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=21.03 E-value=2.3e+02 Score=20.14 Aligned_cols=11 Identities=0% Similarity=0.223 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q 010658 404 ARAEIVKDIEE 414 (505)
Q Consensus 404 ~~~~~~~~~~~ 414 (505)
++..+..++++
T Consensus 38 el~~Lkeele~ 48 (51)
T 3m91_A 38 QLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 336
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=20.77 E-value=1.7e+02 Score=27.03 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=24.5
Q ss_pred CCCCCCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEee
Q 010658 1 MDTEEPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTY 44 (505)
Q Consensus 1 M~~~~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~ 44 (505)
|.....++.||.|.... ..|++++-. .+..+..+||..
T Consensus 1 ~~~~~~~livAlD~~~~--~~a~~~~~~----~~~~~~~ikvg~ 38 (221)
T 3exr_A 1 MTKQLPNLQVALDHSNL--KGAITAAVS----VGNEVDVIEAGT 38 (221)
T ss_dssp --CCCCEEEEEECCSSH--HHHHHHHHH----HGGGCSEEEECH
T ss_pred CCCCCCCEEEEeCCCCH--HHHHHHHHh----hCCCceEEEECH
Confidence 77777899999998753 456666543 234567888843
No 337
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=20.72 E-value=1.5e+02 Score=30.78 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=29.2
Q ss_pred HHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEc
Q 010658 86 KYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMG 127 (505)
Q Consensus 86 ~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmG 127 (505)
.+..-+++.+....++.| ++.+.|.+++++++|+.|+.-
T Consensus 61 ~L~~~L~~~G~~L~v~~g---~~~~~l~~l~~~~~~~~v~~~ 99 (484)
T 1owl_A 61 ELQQRYQQAGSRLLLLQG---DPQHLIPQLAQQLQAEAVYWN 99 (484)
T ss_dssp HHHHHHHHHTSCEEEEES---CHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHCCCeEEEEeC---CHHHHHHHHHHHcCCCEEEEe
Confidence 333333345666667766 899999999999999999883
No 338
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=20.58 E-value=7.9e+02 Score=26.17 Aligned_cols=13 Identities=8% Similarity=0.284 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHH
Q 010658 288 FMKSKINEAREMI 300 (505)
Q Consensus 288 ~l~~~l~ea~~~~ 300 (505)
.|..++...+..+
T Consensus 383 ~L~~~i~~~~~~~ 395 (592)
T 1f5n_A 383 ELAAQLEKKRDDF 395 (592)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 339
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=20.52 E-value=2.5e+02 Score=26.79 Aligned_cols=72 Identities=8% Similarity=-0.026 Sum_probs=40.7
Q ss_pred HHHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEccCCCCCCCCcccccccccchhcccCCCceEEEEEeC
Q 010658 84 LSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICG 163 (505)
Q Consensus 84 L~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmGs~g~~~~~~kr~~~gsvs~~V~k~Ap~~C~V~vV~k 163 (505)
+..+...|...++..++-.. ++.+ ++.|.+.|+|.|.++.+....+ .........+.+..|..++ +|.-
T Consensus 151 l~~l~~~a~~lGl~~lvev~---t~ee--~~~A~~~Gad~IGv~~r~l~~~----~~dl~~~~~l~~~v~~~~p--vVae 219 (272)
T 3qja_A 151 LVSMLDRTESLGMTALVEVH---TEQE--ADRALKAGAKVIGVNARDLMTL----DVDRDCFARIAPGLPSSVI--RIAE 219 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEES---SHHH--HHHHHHHTCSEEEEESBCTTTC----CBCTTHHHHHGGGSCTTSE--EEEE
T ss_pred HHHHHHHHHHCCCcEEEEcC---CHHH--HHHHHHCCCCEEEECCCccccc----ccCHHHHHHHHHhCcccCE--EEEE
Confidence 44455556656676654443 5654 3456678999999987654433 1222334456666665444 4445
Q ss_pred CeE
Q 010658 164 GKL 166 (505)
Q Consensus 164 gkl 166 (505)
|.+
T Consensus 220 gGI 222 (272)
T 3qja_A 220 SGV 222 (272)
T ss_dssp SCC
T ss_pred CCC
Confidence 555
No 340
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=20.47 E-value=3.1e+02 Score=21.44 Aligned_cols=12 Identities=17% Similarity=0.448 Sum_probs=5.0
Q ss_pred HHHHHHHHHHhH
Q 010658 408 IVKDIEELRRQR 419 (505)
Q Consensus 408 ~~~~~~~l~~~r 419 (505)
+.++..+|+.++
T Consensus 53 L~~en~qLk~E~ 64 (81)
T 2jee_A 53 LERENNHLKEQQ 64 (81)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333444444443
No 341
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.37 E-value=5.3e+02 Score=24.73 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=50.0
Q ss_pred CCEEEEEecCChHhHHHHHHHHHHhhhcCCCeEEEEEEeeCCCCCcccccCCCCCCCCcCChHHHHHHHHHHHHHHHHHH
Q 010658 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (505)
Q Consensus 5 ~~kIlVAVDgS~~~S~~AL~WAl~~~~~~g~~IvllHV~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~lL 84 (505)
..||+|=+-|+.+ ...||-|+...-. .+..|++|-..+|. +.
T Consensus 90 ~~ri~vl~Sg~g~-~l~~ll~~~~~g~-l~~~i~~Visn~~~---------------------------------~~--- 131 (286)
T 3n0v_A 90 RPKVVIMVSKADH-CLNDLLYRQRIGQ-LGMDVVAVVSNHPD---------------------------------LE--- 131 (286)
T ss_dssp CCEEEEEESSCCH-HHHHHHHHHHTTS-SCCEEEEEEESSST---------------------------------TH---
T ss_pred CcEEEEEEeCCCC-CHHHHHHHHHCCC-CCcEEEEEEeCcHH---------------------------------HH---
Confidence 4689999999988 8888988865321 23566655542221 00
Q ss_pred HHHHhhhccCccEEEEEecCCCC-h--HHHHHHHHHHcCCCEEEEccC
Q 010658 85 SKYLGFCGKVKAEILKVEKSDEP-V--HKLILDLVSRLTITKLVMGLS 129 (505)
Q Consensus 85 ~~~~~~c~~v~ve~~vve~~~~d-~--~~~Ive~a~~~~idlLVmGs~ 129 (505)
.+|...++.+..+.....+ . ...+++..+++++|+||+-.-
T Consensus 132 ----~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y 175 (286)
T 3n0v_A 132 ----PLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVILARY 175 (286)
T ss_dssp ----HHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEEESSC
T ss_pred ----HHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEEeccc
Confidence 1133445555443211111 1 347899999999999998643
No 342
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=20.32 E-value=3.4e+02 Score=21.82 Aligned_cols=19 Identities=16% Similarity=0.144 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 010658 346 QRDLDSLKEQSCEVIRDVE 364 (505)
Q Consensus 346 ee~l~~eke~~e~~~~~~~ 364 (505)
|+.|++....+.+++.+..
T Consensus 15 EeaL~~kq~~id~lke~~~ 33 (94)
T 3jsv_C 15 EEALVAKQELIDKLKEEAE 33 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHH
Confidence 4455554444444444333
No 343
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=20.15 E-value=57 Score=26.39 Aligned_cols=23 Identities=39% Similarity=0.537 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHcCCCEEEEccC
Q 010658 107 PVHKLILDLVSRLTITKLVMGLS 129 (505)
Q Consensus 107 d~~~~Ive~a~~~~idlLVmGs~ 129 (505)
...+.|.+++++++++.||+|-.
T Consensus 38 ~~~~~l~~li~e~~v~~iVvGlP 60 (98)
T 1iv0_A 38 EDVEALLDFVRREGLGKLVVGLP 60 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeec
Confidence 34678899999999999999953
No 344
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=20.12 E-value=7.5e+02 Score=25.71 Aligned_cols=11 Identities=18% Similarity=0.168 Sum_probs=5.8
Q ss_pred eEEEEEEeeCC
Q 010658 36 SIVILHVTYNI 46 (505)
Q Consensus 36 ~IvllHV~~~~ 46 (505)
.|-+.|-.||.
T Consensus 13 ~~~~~~~~~~~ 23 (602)
T 1cii_A 13 RVDVFHGTPPA 23 (602)
T ss_dssp CCCCCCCCCCC
T ss_pred cccccCCCCch
Confidence 44555655553
No 345
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=20.09 E-value=3.4e+02 Score=28.19 Aligned_cols=42 Identities=10% Similarity=0.126 Sum_probs=30.4
Q ss_pred HHHHHhhhccCccEEEEEecCCCChHHHHHHHHHHcCCCEEEEc
Q 010658 84 LSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMG 127 (505)
Q Consensus 84 L~~~~~~c~~v~ve~~vve~~~~d~~~~Ive~a~~~~idlLVmG 127 (505)
|..+..-+++.+....++.+ +++.+.|.+++++++|+.|+.-
T Consensus 67 L~~L~~~L~~~G~~L~v~~~--g~~~~~l~~l~~~~~~~~V~~~ 108 (509)
T 1u3d_A 67 LAQLDSSLRSLGTCLITKRS--TDSVASLLDVVKSTGASQIFFN 108 (509)
T ss_dssp HHHHHHHHHHTTCCEEEEEC--SCHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeC--CCHHHHHHHHHHHcCCCEEEEe
Confidence 33444444455666666654 3899999999999999999874
No 346
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=20.03 E-value=3.1e+02 Score=21.28 Aligned_cols=15 Identities=7% Similarity=0.251 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHH
Q 010658 286 TEFMKSKINEAREMI 300 (505)
Q Consensus 286 ~~~l~~~l~ea~~~~ 300 (505)
.++||.+|+|.+..+
T Consensus 9 eDKLRrrl~E~~~q~ 23 (78)
T 3iv1_A 9 SDKLRWRMKEEMDRA 23 (78)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 356777777776544
Done!