Query         010661
Match_columns 505
No_of_seqs    175 out of 1985
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 03:07:24 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010661.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010661hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 6.7E-88 1.5E-92  638.2  46.1  461   29-504    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 8.3E-84 1.8E-88  600.0  42.9  476    8-503     9-498 (499)
  3 PLN03234 cytochrome P450 83B1; 100.0 1.5E-82 3.2E-87  625.1  47.5  472   25-503    23-498 (499)
  4 PLN02183 ferulate 5-hydroxylas 100.0   2E-81 4.3E-86  617.2  46.8  473   22-504    28-512 (516)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 3.9E-81 8.4E-86  615.3  48.8  474   25-504    29-509 (517)
  6 PLN02971 tryptophan N-hydroxyl 100.0   4E-81 8.8E-86  616.9  48.0  471   26-504    53-534 (543)
  7 PLN03112 cytochrome P450 famil 100.0 2.3E-80   5E-85  611.2  48.9  495    7-505     9-509 (514)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 9.1E-80   2E-84  601.7  47.7  469   25-504    26-497 (504)
  9 PLN02966 cytochrome P450 83A1  100.0 7.7E-80 1.7E-84  604.5  46.3  475   20-501    19-497 (502)
 10 PLN00168 Cytochrome P450; Prov 100.0 6.7E-78 1.4E-82  592.7  48.1  472   25-504    30-517 (519)
 11 PTZ00404 cytochrome P450; Prov 100.0 5.2E-78 1.1E-82  590.2  43.3  455   26-503    25-482 (482)
 12 PLN02394 trans-cinnamate 4-mon 100.0 2.6E-77 5.6E-82  588.5  47.0  470   25-504    25-502 (503)
 13 PLN02290 cytokinin trans-hydro 100.0 8.1E-77 1.8E-81  586.3  40.2  457   26-505    38-516 (516)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 5.2E-77 1.1E-81  576.9  36.5  457   28-504    33-496 (497)
 15 PLN02655 ent-kaurene oxidase   100.0 7.8E-76 1.7E-80  570.8  43.5  456   32-505     1-465 (466)
 16 PLN02500 cytochrome P450 90B1  100.0   2E-75 4.3E-80  572.2  41.6  425   19-475    27-468 (490)
 17 PLN03018 homomethionine N-hydr 100.0 1.8E-74   4E-79  564.9  48.0  469   29-504    39-524 (534)
 18 PLN02774 brassinosteroid-6-oxi 100.0 6.2E-75 1.3E-79  564.0  39.1  432   26-502    27-462 (463)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-74 2.8E-79  525.1  36.9  457   27-504    47-518 (519)
 20 PLN02169 fatty acid (omega-1)- 100.0 2.6E-74 5.7E-79  562.0  41.1  453   31-503    32-499 (500)
 21 PLN03195 fatty acid omega-hydr 100.0 3.9E-74 8.4E-79  566.7  41.8  459   31-504    31-516 (516)
 22 PLN02196 abscisic acid 8'-hydr 100.0 3.7E-73   8E-78  551.0  40.2  430   24-503    29-462 (463)
 23 PF00067 p450:  Cytochrome P450 100.0 1.4E-74   3E-79  569.3  29.5  433   32-475     1-441 (463)
 24 PLN02738 carotene beta-ring hy 100.0 1.5E-72 3.2E-77  556.8  41.2  438   48-504   150-595 (633)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 9.4E-72   2E-76  540.6  39.9  438   26-504     3-450 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 5.2E-71 1.1E-75  543.7  43.2  439   25-503    37-487 (490)
 27 KOG0684 Cytochrome P450 [Secon 100.0 2.8E-71 6.1E-76  490.3  35.2  443   30-504    31-485 (486)
 28 PLN02987 Cytochrome P450, fami 100.0   9E-71   2E-75  532.0  41.2  437   24-503    24-468 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 2.1E-70 4.6E-75  534.9  40.6  453   31-503    13-481 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.2E-68 2.6E-73  521.3  42.8  442   38-504    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 6.4E-61 1.4E-65  459.3  31.1  401   27-475    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 8.3E-56 1.8E-60  419.6  33.2  360   51-474    24-387 (411)
 33 PF12508 DUF3714:  Protein of u  56.2     3.1 6.7E-05   35.0  -0.5   44  354-399    51-94  (200)
 34 PHA02681 ORF089 virion membran  49.7      85  0.0018   21.7   5.6   22    4-25      6-27  (92)
 35 PRK06789 flagellar motor switc  48.5      19 0.00041   24.7   2.4   40  361-400    21-62  (74)
 36 PF12554 MOZART1:  Mitotic-spin  45.1      57  0.0012   20.2   3.8   42  296-337     6-47  (48)
 37 PF05952 ComX:  Bacillus compet  43.9     7.9 0.00017   24.8   0.1   25  318-342     4-28  (57)
 38 PF01102 Glycophorin_A:  Glycop  43.8      19  0.0004   27.6   2.0   16    9-24     77-92  (122)
 39 PF15102 TMEM154:  TMEM154 prot  38.9      28 0.00061   27.4   2.3   27    3-29     61-87  (146)
 40 PF14129 DUF4296:  Domain of un  38.9 1.4E+02  0.0031   21.2   6.4   51  292-342    29-79  (87)
 41 KOG3506 40S ribosomal protein   38.6      15 0.00031   23.1   0.6   10  437-446    12-21  (56)
 42 PF10717 ODV-E18:  Occlusion-de  37.3      78  0.0017   22.1   4.0   17    9-25     33-49  (85)
 43 PF09201 SRX:  SRX;  InterPro:   36.6      29 0.00063   26.9   2.1   22  444-465    18-39  (148)
 44 TIGR03779 Bac_Flav_CT_M Bacter  33.7       9 0.00019   36.2  -1.2   43  354-398   254-296 (410)
 45 PF12273 RCR:  Chitin synthesis  33.1      21 0.00045   27.9   0.9   12   14-25     13-24  (130)
 46 PF15330 SIT:  SHP2-interacting  32.6      99  0.0021   23.1   4.3   11   37-47     45-55  (107)
 47 KOG3653 Transforming growth fa  32.5 1.5E+02  0.0033   28.8   6.4   47   50-96    210-257 (534)
 48 PHA03162 hypothetical protein;  30.3      40 0.00086   25.8   1.9   26  440-465     2-27  (135)
 49 PF14483 Cut8_M:  Cut8 dimerisa  29.6 1.2E+02  0.0026   17.6   3.9   13  323-335    23-35  (38)
 50 PF08492 SRP72:  SRP72 RNA-bind  26.2      41  0.0009   21.9   1.2    8  418-425    44-51  (59)
 51 PHA03049 IMV membrane protein;  25.8 1.6E+02  0.0035   19.5   3.7    9   28-36     29-37  (68)
 52 PRK05933 type III secretion sy  25.6      65  0.0014   29.3   2.7   44  357-400   316-362 (372)
 53 PF07886 BA14K:  BA14K-like pro  24.0      71  0.0015   17.6   1.7   16  432-447    16-31  (31)
 54 PF10777 YlaC:  Inner membrane   23.4      50  0.0011   26.0   1.4   38  319-356   114-151 (155)
 55 PF13893 RRM_5:  RNA recognitio  23.1   2E+02  0.0043   17.9   4.9   36   55-90      1-40  (56)
 56 PF05393 Hum_adeno_E3A:  Human   23.1 1.2E+02  0.0025   21.5   2.9    6   37-42     66-71  (94)
 57 PF07849 DUF1641:  Protein of u  23.0      79  0.0017   18.8   1.9   19  317-335    13-31  (42)
 58 PF12606 RELT:  Tumour necrosis  22.4 2.1E+02  0.0046   17.9   3.9   25    7-31     11-35  (50)
 59 PF15206 FAM209:  FAM209 family  22.2      83  0.0018   24.5   2.3   36    6-41     41-77  (150)
 60 PF13625 Helicase_C_3:  Helicas  22.1 1.9E+02  0.0042   22.4   4.6   40   50-91     75-114 (129)
 61 PRK10597 DNA damage-inducible   21.9 2.6E+02  0.0057   19.7   4.5   38   53-90     24-69  (81)
 62 PRK13467 F0F1 ATP synthase sub  20.9 1.6E+02  0.0035   19.7   3.2   25  313-337    20-44  (66)
 63 KOG0114 Predicted RNA-binding   20.8 3.6E+02  0.0079   20.1   5.6   59   29-89     11-75  (124)
 64 TIGR01260 ATP_synt_c ATP synth  20.1 1.3E+02  0.0029   19.5   2.7   23  314-336    11-33  (58)
 65 PF12444 Sox_N:  Sox developmen  20.1      65  0.0014   22.8   1.3   19  455-473    61-79  (84)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.7e-88  Score=638.19  Aligned_cols=461  Identities=46%  Similarity=0.793  Sum_probs=405.1

Q ss_pred             CCCCCCCCCCccccccccCCCC-chHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCc-cccch
Q 010661           29 LNLPPSPPRLPIIGNLHQLGTL-RHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKN-TAGDI  106 (505)
Q Consensus        29 ~~~~pgp~~~p~lG~~~~~~~~-~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~-~~~~~  106 (505)
                      .+.||||+++|++||++++... ++..+.++.++|||++.+++|..++|||+|++.++|++.+++..|.+|+.. .....
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7899999999999999999776 999999999999999999999999999999999999999999999999972 24455


Q ss_pred             hccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHH
Q 010661          107 IFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARSV  186 (505)
Q Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  186 (505)
                      ..+++.+++++.+|+.|+.+||+....+++...++.+...-.++++.+++.+.+ ..++++||+...+..++.++|++.+
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence            566778899998999999999999999999999999888889999999999987 2233899999999999999999999


Q ss_pred             hcccchhcccCCchhHHHHHHHHHHHhhhccccccccc-cCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccCC
Q 010661          187 LGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFP-SLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISDE  265 (505)
Q Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (505)
                      ||.++... +++...++.++..+.......+...+++| ++.++....+..++......++.+++++.|+++++.. .. 
T Consensus       184 fG~rf~~~-~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~-  260 (489)
T KOG0156|consen  184 FGRRFEEE-DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD-  260 (489)
T ss_pred             hCCccccC-CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc-
Confidence            99999842 11223457788888888888888889999 5666654446667777777779999999999998875 11 


Q ss_pred             CCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCC
Q 010661          266 DNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKHKS  345 (505)
Q Consensus       266 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~  345 (505)
                          +++.|+++.++....+++.+. +++++|...+.++++||+|||++|+.|++.+|++||++|+|+++||++++|.++
T Consensus       261 ----~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r  335 (489)
T KOG0156|consen  261 ----EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGR  335 (489)
T ss_pred             ----CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence                112899999999876544222 999999999999999999999999999999999999999999999999999988


Q ss_pred             CCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccC
Q 010661          346 SINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRFIDS  425 (505)
Q Consensus       346 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~~~  425 (505)
                      .++.+|+.+||||+|||+|++|++|++|+..+|.+.+|+.++||.|||||.|+++.|++||||++|+||++|+||||+++
T Consensus       336 ~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~  415 (489)
T KOG0156|consen  336 LVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDS  415 (489)
T ss_pred             CCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeeccCC
Q 010661          426 TIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPTLYL  504 (505)
Q Consensus       426 ~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  504 (505)
                      + +.+.....++|||.|.|.|||..+|.+|+.+++|.|+++|+|+.+++    +++..... ++...+.|+...+.+|.
T Consensus       416 ~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  416 N-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             c-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCcceeeeecCC
Confidence            5 33336789999999999999999999999999999999999999877    23344443 66777888888888775


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.3e-84  Score=599.99  Aligned_cols=476  Identities=26%  Similarity=0.383  Sum_probs=377.5

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCCCCCCCccccccccC--CCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHH
Q 010661            8 FLLLLFPFLFLRLKHSRNKNKLNLPPSPPRLPIIGNLHQL--GTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITR   85 (505)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~--~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~   85 (505)
                      +++++++++++++.+....+.++-+|||+++|++||+..+  .+.+.....+...+||+++.++.+.+|.++|+||++|+
T Consensus         9 l~~~l~~l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik   88 (499)
T KOG0158|consen    9 LLILLLVLLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIK   88 (499)
T ss_pred             HHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHH
Confidence            3333334445555555556666789999999999999888  33345666666666699999999999999999999999


Q ss_pred             HHHHhcCccccCCC--CccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhcc
Q 010661           86 EIIKNHDIVFANRP--KNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCF  163 (505)
Q Consensus        86 ~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~  163 (505)
                      +|+.++.++|.++.  ....-..  -.+...+++..|++||+.|..+ +|.|++.+++.+.+.+++.++++++.+.+...
T Consensus        89 ~I~ik~F~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~  165 (499)
T KOG0158|consen   89 EILIKDFDNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSE  165 (499)
T ss_pred             HHHHHhCccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999998843  2222111  1133567777899999999997 89999999999999999999999999988644


Q ss_pred             CCCceeHHHHHHHHHHHHHHHHHhcccchhcccCCchhHHHHHHHHHHHh-hhccc----cccccccCccchhhhhhhhh
Q 010661          164 NGGSVNLAEMLQTVANNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQ-SASFC----YRDLFPSLGWLDVVTGRIGR  238 (505)
Q Consensus       164 ~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~~~~~~~~~~~  238 (505)
                      .+..+++.+.+.+++.|+|++++||.+.+++.  +...+|.......... .....    ....+|.+....   .....
T Consensus       166 ~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~--d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~~~  240 (499)
T KOG0158|consen  166 GGQEGEIKDLCARYTTDVIGSCAFGLDANSLR--DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVKLF  240 (499)
T ss_pred             ccCCccHHHHHHHHHHHHHhHhhcccchhhhc--CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcccC
Confidence            44688999999999999999999999998765  3445666555544433 11111    111222221110   11222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCCCCCCCccchHHHHHHhhccc--CCcC-c-cCCHHHHHHHHHHHHhccccchHH
Q 010661          239 LKATAREFDALFDQVIEEHRKSEISDEDNDQSDEKDLVHTILKLQKD--GRLG-I-ELNQDNLKALLLDMFSGGTETTSA  314 (505)
Q Consensus       239 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~-~-~l~~~~i~~~~~~~~~Ag~~tt~~  314 (505)
                      ..+..+.+.+.+.+.++.|..+        ...++|+++.+++++.+  .+.+ . .+|.+||+++++.+++||+||||+
T Consensus       241 ~~~~~~~~~~~v~~~v~~R~~~--------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~  312 (499)
T KOG0158|consen  241 PEDVTDFFRKLVNSRVEQREKE--------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTAS  312 (499)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc--------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHH
Confidence            4445555666667777666322        35689999999999754  1111 1 599999999999999999999999


Q ss_pred             HHHHHHHHHhhCchhHHHHHHHHHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCccccccccccccccc-CeeeCC
Q 010661          315 TVEWAMAELVKNPKLMKKTQEEVRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLR-GYDIPA  393 (505)
Q Consensus       315 ~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~-g~~ip~  393 (505)
                      +++.++|+||+||++|+|+|+||++++.+...+|+|.+.+|+||++||+||||+||+++.. .|.|++|++++ ++.|||
T Consensus       313 tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~k  391 (499)
T KOG0158|consen  313 TLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPK  391 (499)
T ss_pred             HHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCC
Confidence            9999999999999999999999999977655599999999999999999999999999996 59999999999 999999


Q ss_pred             CCEEEecchhhccCCCCCCCCCCCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCC
Q 010661          394 NTTTYINAWAIQRDPKVWNRAEEFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPG  473 (505)
Q Consensus       394 g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~  473 (505)
                      |+.|.++++++||||++||||++|+||||.+++.+ ..++..|+|||.|||+|+|++||++|+|+.|++||++|+++.-+
T Consensus       392 G~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~  470 (499)
T KOG0158|consen  392 GTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP  470 (499)
T ss_pred             CCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC
Confidence            99999999999999999999999999999987644 44788999999999999999999999999999999999999877


Q ss_pred             CCCCCCCCcccccCeeeecCCCeeEeeccC
Q 010661          474 GAVNEDLDMTEVFGLTVSKKFPLILVPTLY  503 (505)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  503 (505)
                      .+.+ . ......+.+..|+.++++++.+|
T Consensus       471 ~t~~-~-~~~~~~~~~l~pk~gi~Lkl~~r  498 (499)
T KOG0158|consen  471 TTII-P-LEGDPKGFTLSPKGGIWLKLEPR  498 (499)
T ss_pred             cccC-c-ccCCccceeeecCCceEEEEEeC
Confidence            4332 2 22223366678999999999887


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.5e-82  Score=625.10  Aligned_cols=472  Identities=39%  Similarity=0.707  Sum_probs=387.0

Q ss_pred             CCCCCCCCCCCCCCccccccccCC-CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccc
Q 010661           25 NKNKLNLPPSPPRLPIIGNLHQLG-TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTA  103 (505)
Q Consensus        25 ~~~~~~~~pgp~~~p~lG~~~~~~-~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~  103 (505)
                      .+++.+.||||+++|++||+..+. .++..++.+++++||++|++++|+.++|+++||+++++|+.++...|..++....
T Consensus        23 ~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         23 TKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             cCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            345567899999999999998884 4788899999999999999999999999999999999999988777887775443


Q ss_pred             cchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHH
Q 010661          104 GDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIA  183 (505)
Q Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  183 (505)
                      .......+....+...++.|+++|+.+..++|++++++.+.+.+.++++++++.+.+..++++++|+.+.+..+++++++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~  182 (499)
T PLN03234        103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVC  182 (499)
T ss_pred             hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHH
Confidence            33222223444455668999999998657889999999999999999999999998665567789999999999999999


Q ss_pred             HHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 010661          184 RSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEIS  263 (505)
Q Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  263 (505)
                      +++||.+++...  ....++.+.................+|++.++..+.+..++..++.+.+.+++.+.|+++++....
T Consensus       183 ~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (499)
T PLN03234        183 RQAFGKRYNEYG--TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP  260 (499)
T ss_pred             HHHhCCcccccc--hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999999886321  122344444444333222222334455544432233445677888899999999999987654210


Q ss_pred             CCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC
Q 010661          264 DEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKH  343 (505)
Q Consensus       264 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  343 (505)
                           ....+|+++.|++...+++.+..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|+++++++
T Consensus       261 -----~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~  335 (499)
T PLN03234        261 -----KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD  335 (499)
T ss_pred             -----CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence                 123578999998765433222368999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCcc
Q 010661          344 KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVW-NRAEEFLPDRF  422 (505)
Q Consensus       344 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~PeR~  422 (505)
                      .+.++++++++|||++|||+|++|++|+++...+|.+.+|++++|+.|||||.|.++++++||||++| +||++||||||
T Consensus       336 ~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~  415 (499)
T PLN03234        336 KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERF  415 (499)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhh
Confidence            77799999999999999999999999999997679999999999999999999999999999999999 89999999999


Q ss_pred             ccCCCC--CCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEee
Q 010661          423 IDSTID--FNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVP  500 (505)
Q Consensus       423 ~~~~~~--~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (505)
                      +++...  .+.....|+|||+|+|.|+|+++|++|+++++|+|+++|+|+++++..++.+......+++..++.++.+.+
T Consensus       416 l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (499)
T PLN03234        416 MKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAP  495 (499)
T ss_pred             cCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEe
Confidence            976432  233466899999999999999999999999999999999999987654455666667788888888999999


Q ss_pred             ccC
Q 010661          501 TLY  503 (505)
Q Consensus       501 ~~r  503 (505)
                      ++|
T Consensus       496 ~~~  498 (499)
T PLN03234        496 TKH  498 (499)
T ss_pred             ecC
Confidence            987


No 4  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2e-81  Score=617.21  Aligned_cols=473  Identities=38%  Similarity=0.720  Sum_probs=376.7

Q ss_pred             ccCCCCCCCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCc
Q 010661           22 HSRNKNKLNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKN  101 (505)
Q Consensus        22 ~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~  101 (505)
                      +.+..++.+.||||+++|++|++..+....+.++.+++++||++|++++++.++|+++||+++++|+.++...|..++..
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            33444456789999999999999877656678899999999999999999999999999999999999887777777654


Q ss_pred             cccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHH
Q 010661          102 TAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNI  181 (505)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~  181 (505)
                      .........+.+++++.+|+.|+++|+++..++|+...++.+.+++ +++..+++.+.+  ..++++|+.+++..+++++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~v  184 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRNI  184 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHH
Confidence            3332222223456777889999999999557889999999888864 678999999864  2467899999999999999


Q ss_pred             HHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 010661          182 IARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSE  261 (505)
Q Consensus       182 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  261 (505)
                      +++++||.+++     ...+++.+....+............+|++.++.. ....++..+..+.+.+++.+.|++++++.
T Consensus       185 i~~~~fG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (516)
T PLN02183        185 TYRAAFGSSSN-----EGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKR  258 (516)
T ss_pred             HHhHhhcCccc-----chHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999998775     2334566655555443333334455665543311 12244566677788888888888876543


Q ss_pred             ccCCC-C-CCCccchHHHHHHhhcccCC---------cCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhH
Q 010661          262 ISDED-N-DQSDEKDLVHTILKLQKDGR---------LGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLM  330 (505)
Q Consensus       262 ~~~~~-~-~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q  330 (505)
                      ..+.. . .+....|+++.++++..++.         ....++++++.+++.++++||+|||+.+++|++++|++||++|
T Consensus       259 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq  338 (516)
T PLN02183        259 KNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDL  338 (516)
T ss_pred             cccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHH
Confidence            21111 0 01234689999998643211         1125899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCC
Q 010661          331 KKTQEEVRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKV  410 (505)
Q Consensus       331 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~  410 (505)
                      +|+++|++++++.++.++++++++||||+|||+|+||++|+++... |.+.+|++++|+.|||||.|.++.+++||||++
T Consensus       339 ~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~  417 (516)
T PLN02183        339 KRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNS  417 (516)
T ss_pred             HHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCccc
Confidence            9999999999986667899999999999999999999999999985 999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCC-CCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCee
Q 010661          411 WNRAEEFLPDRFIDSTI-DFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLT  489 (505)
Q Consensus       411 ~~~p~~f~PeR~~~~~~-~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  489 (505)
                      |+||++|+||||++++. +...++..|+|||+|+|+|+|++||++|+++++|+|+++|+|++.++..++.++.....+.+
T Consensus       418 ~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  497 (516)
T PLN02183        418 WEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLT  497 (516)
T ss_pred             cCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccc
Confidence            99999999999997543 22234568999999999999999999999999999999999998776433334444455665


Q ss_pred             eecCCCeeEeeccCC
Q 010661          490 VSKKFPLILVPTLYL  504 (505)
Q Consensus       490 ~~~~~~~~~~~~~r~  504 (505)
                      .+++.++.+.+++|+
T Consensus       498 ~~~~~~~~~~~~~r~  512 (516)
T PLN02183        498 APRATRLVAVPTYRL  512 (516)
T ss_pred             cccCCCcEEEeecCC
Confidence            556678999999886


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.9e-81  Score=615.32  Aligned_cols=474  Identities=39%  Similarity=0.742  Sum_probs=385.1

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 010661           25 NKNKLNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAG  104 (505)
Q Consensus        25 ~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  104 (505)
                      .+++.+.||||+++|++|++..+..+++..+.+++++||++|++++|++++|+++||+++++++.++...|.+++.....
T Consensus        29 ~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         29 GKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            34455678999999999999888777899999999999999999999999999999999999999887778877654433


Q ss_pred             chhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010661          105 DIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIAR  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  184 (505)
                      ......+.+.+++.+|+.|+++|+.+..+.|+.++++.+.+.+.+++.++++.+.+.. +++++|+.++++.+++|+++.
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHH
Confidence            3333234567777789999999999854789999999999999999999999997642 356899999999999999999


Q ss_pred             HHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccC
Q 010661          185 SVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISD  264 (505)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  264 (505)
                      .+||.++...+.+.....+.+....+............+|.+.|+.. ....++..+..+.+.+++.+.++++++.... 
T Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-  265 (517)
T PLN02687        188 AMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-  265 (517)
T ss_pred             HHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            99999976432222334566655555443332222345565444311 1223456667788889999999988765321 


Q ss_pred             CCCCCCccchHHHHHHhhcccC---CcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHh
Q 010661          265 EDNDQSDEKDLVHTILKLQKDG---RLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVV  341 (505)
Q Consensus       265 ~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  341 (505)
                         +.....|+++.+++...+.   ..+..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+++++
T Consensus       266 ---~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        266 ---GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ---cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence               0123579999999875431   1123699999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCc
Q 010661          342 KHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDR  421 (505)
Q Consensus       342 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR  421 (505)
                      +.++.++.+++.+||||+|||+|+||++|+++...+|.+.+|++++|+.||+||.|.++.+++||||++|+||++|+|||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence            87778999999999999999999999999999877899999999999999999999999999999999999999999999


Q ss_pred             cccCCCC----CCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCee
Q 010661          422 FIDSTID----FNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLI  497 (505)
Q Consensus       422 ~~~~~~~----~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (505)
                      |++++..    ....+..|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++..++++......+++..++.+++
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLM  502 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeE
Confidence            9975321    112456899999999999999999999999999999999999987643334444445666666777899


Q ss_pred             EeeccCC
Q 010661          498 LVPTLYL  504 (505)
Q Consensus       498 ~~~~~r~  504 (505)
                      +++++|+
T Consensus       503 ~~~~~R~  509 (517)
T PLN02687        503 VHPRPRL  509 (517)
T ss_pred             EeeccCC
Confidence            9999885


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4e-81  Score=616.86  Aligned_cols=471  Identities=27%  Similarity=0.487  Sum_probs=369.5

Q ss_pred             CCCCCCCCCCCCCccccccccCCC-C-chHHHHHHHHhcC-CeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCcc
Q 010661           26 KNKLNLPPSPPRLPIIGNLHQLGT-L-RHRSLKALSNKYG-PLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNT  102 (505)
Q Consensus        26 ~~~~~~~pgp~~~p~lG~~~~~~~-~-~~~~~~~~~~~yG-~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~  102 (505)
                      .++.+.||||+++|++||++.+.. . .+.++.++.++|| +++++++|++++|+|+||+++++++.+++..|.+++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            345678999999999999988733 2 3677899999999 899999999999999999999999999888888887543


Q ss_pred             ccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHH
Q 010661          103 AGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNII  182 (505)
Q Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i  182 (505)
                      .......+..++++..+|+.|+++|+++..+++++...+.+.+.+.++++.+++.+.+...+++++|+.+.+..++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            33222222234577788999999999987777877777788899999999999888764445568999999999999999


Q ss_pred             HHHHhcccchhccc---CCchhHHHHHHHHHHHhhh---ccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 010661          183 ARSVLGRRVEEETA---GGNSNKFGELSRRMMIQSA---SFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEE  256 (505)
Q Consensus       183 ~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  256 (505)
                      ++++||.++...+.   ++...++......+.....   ...+.+++|.+.++. ..+..+...+..+.+.+++.+.|++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  291 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDE  291 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998742110   0011122233333322211   112334566554431 1122344555667788888888888


Q ss_pred             HHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHH
Q 010661          257 HRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEE  336 (505)
Q Consensus       257 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~E  336 (505)
                      +++....+.   .....|+++.|++...+++ ...++++++.+++.++++||+|||+.+++|++++|+.||++|+|+++|
T Consensus       292 ~~~~~~~~~---~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  367 (543)
T PLN02971        292 RIKMWREGK---RTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEE  367 (543)
T ss_pred             HHHHHhccC---CCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            765432110   1224699999998653321 124999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCC
Q 010661          337 VRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEE  416 (505)
Q Consensus       337 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  416 (505)
                      |++++++++.++++++.+|||++|||+|+||++|+++...+|.+.+|++++||.||||+.|+++.|++||||++|+||++
T Consensus       368 I~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~  447 (543)
T PLN02971        368 IDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLS  447 (543)
T ss_pred             HHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccc
Confidence            99999987889999999999999999999999999999778999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCC--CCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCC
Q 010661          417 FLPDRFIDSTID--FNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKF  494 (505)
Q Consensus       417 f~PeR~~~~~~~--~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (505)
                      |+||||+++..+  ...++..|+|||+|+|.|+|++||++|+++++|+||++|+|+++++..  .+++...++ ++..+.
T Consensus       448 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~~  524 (543)
T PLN02971        448 FKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFLSK  524 (543)
T ss_pred             cCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-cccccc
Confidence            999999975322  122456899999999999999999999999999999999999876542  345555556 554555


Q ss_pred             CeeEeeccCC
Q 010661          495 PLILVPTLYL  504 (505)
Q Consensus       495 ~~~~~~~~r~  504 (505)
                      ++.+.+++|+
T Consensus       525 ~~~~~~~~~~  534 (543)
T PLN02971        525 PLVMVGELRL  534 (543)
T ss_pred             cceeeeeecC
Confidence            7888888774


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.3e-80  Score=611.25  Aligned_cols=495  Identities=34%  Similarity=0.655  Sum_probs=393.8

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHH
Q 010661            7 LFLLLLFPFLFLRLKHSRNKNKLNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITRE   86 (505)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~   86 (505)
                      +++++++.++++++.+++..++.+.||||+++|++||+.++..+++..+.+++++||++|++++++++.|+++||+++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~   88 (514)
T PLN03112          9 LFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIRE   88 (514)
T ss_pred             HHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHH
Confidence            34444555555666666677788899999999999999888777899999999999999999999999999999999999


Q ss_pred             HHHhcCccccCCCCccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCC
Q 010661           87 IIKNHDIVFANRPKNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGG  166 (505)
Q Consensus        87 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  166 (505)
                      |+.++...|.+++.........++...+++..+|+.|+++|+.+..+.|+.++++.+.+.+.++++.+++.+.+....++
T Consensus        89 vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~  168 (514)
T PLN03112         89 ILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGK  168 (514)
T ss_pred             HHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Confidence            99988777877665432222222233455667799999999997577899999999999999999999998876544567


Q ss_pred             ceeHHHHHHHHHHHHHHHHHhcccchhcccC--CchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHH
Q 010661          167 SVNLAEMLQTVANNIIARSVLGRRVEEETAG--GNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAR  244 (505)
Q Consensus       167 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  244 (505)
                      ++|+.+.+..+++++++.++||.++......  ....++.+....+...........++|.+.++.. ....++..++.+
T Consensus       169 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~  247 (514)
T PLN03112        169 PVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEK  247 (514)
T ss_pred             eeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHH
Confidence            8999999999999999999999987432110  1123455555544433222223345565444321 123355667778


Q ss_pred             HHHHHHHHHHHHHHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHh
Q 010661          245 EFDALFDQVIEEHRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELV  324 (505)
Q Consensus       245 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~  324 (505)
                      .+.+++.+.++++++...+...  ..+..|+++.++++..+++ +..++++++.+++.++++||+|||+.+++|++++|+
T Consensus       248 ~~~~~~~~~i~~~~~~~~~~~~--~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~  324 (514)
T PLN03112        248 RVDEFHDKIIDEHRRARSGKLP--GGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVI  324 (514)
T ss_pred             HHHHHHHHHHHHHHHhhccccc--CCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence            8888999999887765321111  1234699999998653321 225899999999999999999999999999999999


Q ss_pred             hCchhHHHHHHHHHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhh
Q 010661          325 KNPKLMKKTQEEVRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAI  404 (505)
Q Consensus       325 ~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~  404 (505)
                      +||++|+|+++|+++++++++.++++++++|||++|||+|++|++|+++...+|.+.+|++++|+.|||||.|.++.+++
T Consensus       325 ~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~  404 (514)
T PLN03112        325 KNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGL  404 (514)
T ss_pred             hChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHh
Confidence            99999999999999999887789999999999999999999999999998767999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccccCCC---CC-CCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCC
Q 010661          405 QRDPKVWNRAEEFLPDRFIDSTI---DF-NGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDL  480 (505)
Q Consensus       405 ~~d~~~~~~p~~f~PeR~~~~~~---~~-~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~  480 (505)
                      ||||++|+||++|+||||.++..   .. ...+..|+|||+|+|.|||++||++|++++|++|+++|+|+++++...+++
T Consensus       405 h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  484 (514)
T PLN03112        405 GRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDI  484 (514)
T ss_pred             hCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccC
Confidence            99999999999999999865321   11 123468999999999999999999999999999999999998765433444


Q ss_pred             CcccccCeeeecCCCeeEeeccCCC
Q 010661          481 DMTEVFGLTVSKKFPLILVPTLYLP  505 (505)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~r~~  505 (505)
                      ......+++.+++.++.+++.+|++
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        485 DTQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             CCccccCcccccCCCeEEEeecCCc
Confidence            4555567777778889999999874


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=9.1e-80  Score=601.70  Aligned_cols=469  Identities=37%  Similarity=0.702  Sum_probs=381.0

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 010661           25 NKNKLNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAG  104 (505)
Q Consensus        25 ~~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  104 (505)
                      ...+.+.||||+++|++|++..+..+++.++.+++++||++|++++|++++|+|+||+++++++.++...|.+++.....
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            34556789999999999998877666889999999999999999999999999999999999999887778877654433


Q ss_pred             chhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010661          105 DIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIAR  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  184 (505)
                      .....++.+++++.+|+.|+++|+.+..+.|+.++++.+.+.+.+++..+++.+.+...+++++|+.+++..++.++++.
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~  185 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQ  185 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHH
Confidence            22222344567777899999999998656899999999999999999999999876555677899999999999999999


Q ss_pred             HHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccC
Q 010661          185 SVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISD  264 (505)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  264 (505)
                      ++||.++... .+...+++.+.............+...+|.+.|+. .....+...+..+.+.+++.+.++++++.... 
T Consensus       186 ~~fg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  262 (504)
T PLN00110        186 VILSRRVFET-KGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASAHE-  262 (504)
T ss_pred             HHhCCccccc-CchhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence            9999987211 11223456666655544333223335566655432 12233455666778888888888887654311 


Q ss_pred             CCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCC
Q 010661          265 EDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKHK  344 (505)
Q Consensus       265 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  344 (505)
                          .....|+++.+++..... .+..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++++++.+
T Consensus       263 ----~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  337 (504)
T PLN00110        263 ----RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN  337 (504)
T ss_pred             ----cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence                123468999999764321 123699999999999999999999999999999999999999999999999999877


Q ss_pred             CCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCcccc
Q 010661          345 SSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRFID  424 (505)
Q Consensus       345 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~~  424 (505)
                      +.++++++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+++|+||++||||++|+||||++
T Consensus       338 ~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~  417 (504)
T PLN00110        338 RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLS  417 (504)
T ss_pred             CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccC
Confidence            77999999999999999999999999999877899999999999999999999999999999999999999999999997


Q ss_pred             CCCCCC---CCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeec
Q 010661          425 STIDFN---GQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPT  501 (505)
Q Consensus       425 ~~~~~~---~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (505)
                      ++....   .+...|+|||+|+|.|+|++||++|++++||+|+++|+|++.++.   +.+.....+++..++.+++++++
T Consensus       418 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  494 (504)
T PLN00110        418 EKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVT  494 (504)
T ss_pred             CCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEeec
Confidence            532211   123579999999999999999999999999999999999987653   23333456677778889999998


Q ss_pred             cCC
Q 010661          502 LYL  504 (505)
Q Consensus       502 ~r~  504 (505)
                      +|.
T Consensus       495 ~r~  497 (504)
T PLN00110        495 PRL  497 (504)
T ss_pred             cCC
Confidence            885


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=7.7e-80  Score=604.52  Aligned_cols=475  Identities=35%  Similarity=0.660  Sum_probs=369.6

Q ss_pred             hhccCCCCCCCCCCCCCCCccccccccC-CCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCC
Q 010661           20 LKHSRNKNKLNLPPSPPRLPIIGNLHQL-GTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANR   98 (505)
Q Consensus        20 ~~~~~~~~~~~~~pgp~~~p~lG~~~~~-~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~   98 (505)
                      .+.+...+..+.||||+++|++||++.+ ..+++..+.+++++||++|++++++.++|+++||+++++|+.++...|.++
T Consensus        19 ~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~   98 (502)
T PLN02966         19 LYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADR   98 (502)
T ss_pred             HHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCC
Confidence            3344444556789999999999999888 457899999999999999999999999999999999999999877667655


Q ss_pred             CCccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHH
Q 010661           99 PKNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVA  178 (505)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  178 (505)
                      +..........+.....+..+|+.|+++|+.+..++|+..+++.+.+.+.+++.++++.+.+...+++.+|+.+++..++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t  178 (502)
T PLN02966         99 PPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFT  178 (502)
T ss_pred             CCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHH
Confidence            54332222222223344556699999999995578999999999999999999999999986555567899999999999


Q ss_pred             HHHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010661          179 NNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHR  258 (505)
Q Consensus       179 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  258 (505)
                      +++++.++||.+++...  +....+.+.............+..++|.+.++..+++..+......+...+++.+.++++.
T Consensus       179 ~dvi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (502)
T PLN02966        179 NSVVCRQAFGKKYNEDG--EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETL  256 (502)
T ss_pred             HHHHHHHHhCCccCccc--hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999986321  1122344433333333222233344554332211122222333455566677777777654


Q ss_pred             hccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHH
Q 010661          259 KSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVR  338 (505)
Q Consensus       259 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  338 (505)
                      ....   .  ..+..|+++.+++...++..+..++++++.++++++++||+|||+.+++|++++|++||++|+|+++|++
T Consensus       257 ~~~~---~--~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~  331 (502)
T PLN02966        257 DPKR---V--KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVR  331 (502)
T ss_pred             hccc---c--ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            4321   0  1234689999998754432223689999999999999999999999999999999999999999999999


Q ss_pred             HHhcCC--CCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCC-CCCC
Q 010661          339 RVVKHK--SSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVW-NRAE  415 (505)
Q Consensus       339 ~~~~~~--~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~  415 (505)
                      ++++++  +.++++++++||||+|||+|+||++|+++...+|.+.+|++++|+.||+||.|.++++++||||++| |||+
T Consensus       332 ~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~  411 (502)
T PLN02966        332 EYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPD  411 (502)
T ss_pred             HHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChh
Confidence            999753  3579999999999999999999999999987679999999999999999999999999999999999 9999


Q ss_pred             CCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCC
Q 010661          416 EFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFP  495 (505)
Q Consensus       416 ~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (505)
                      +|+||||++++.+....+..|+|||+|+|+|+|++||++|+++++|+||++|+|++.++..++.++.+...+++..++.+
T Consensus       412 ~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (502)
T PLN02966        412 EFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQH  491 (502)
T ss_pred             hCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCC
Confidence            99999999754322234568999999999999999999999999999999999999887654555555556766544446


Q ss_pred             eeEeec
Q 010661          496 LILVPT  501 (505)
Q Consensus       496 ~~~~~~  501 (505)
                      +.++.+
T Consensus       492 ~~~~~~  497 (502)
T PLN02966        492 LKLVPE  497 (502)
T ss_pred             eEEEEE
Confidence            665543


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=6.7e-78  Score=592.68  Aligned_cols=472  Identities=25%  Similarity=0.447  Sum_probs=365.4

Q ss_pred             CCCCCCCCCCCCCCccccccccCC---CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCc
Q 010661           25 NKNKLNLPPSPPRLPIIGNLHQLG---TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKN  101 (505)
Q Consensus        25 ~~~~~~~~pgp~~~p~lG~~~~~~---~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~  101 (505)
                      ..+..+.||||+++|++|++..+.   .+++..+.+++++||++|++++|+.+.|+++||+++++++.++...|..++..
T Consensus        30 ~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~  109 (519)
T PLN00168         30 GKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAV  109 (519)
T ss_pred             CCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcc
Confidence            344567799999999999987653   35678899999999999999999999999999999999999888888777654


Q ss_pred             cccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHH
Q 010661          102 TAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNI  181 (505)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~  181 (505)
                      ......+..+....+..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.+.+....++.+|+.+.+..++.++
T Consensus       110 ~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        110 ASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             cchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence            32222221111222236799999999855589999999999999999999999999986544455789999999999999


Q ss_pred             HHHHHhcccchhcccCCchhHHHHHHHHHHHhh-hccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhc
Q 010661          182 IARSVLGRRVEEETAGGNSNKFGELSRRMMIQS-ASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKS  260 (505)
Q Consensus       182 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  260 (505)
                      ++.++||.+++.    .....+......+.... ....+..++|.+.+.. .....++..+..+.+.+++.+.++++++.
T Consensus       190 i~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        190 LVLMCFGERLDE----PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHHHcCCCcCh----hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998852    11222333332221111 1122334456443221 11234455667788899999999888764


Q ss_pred             cccC---CCCC---CCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHH
Q 010661          261 EISD---EDND---QSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQ  334 (505)
Q Consensus       261 ~~~~---~~~~---~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~  334 (505)
                      ....   ....   .....|+++.|++....+..+..++++++.+++.++++||+|||+.+++|++++|++||++|+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            3110   0000   011468999999765322212369999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCC-CCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCC
Q 010661          335 EEVRRVVKHK-SSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNR  413 (505)
Q Consensus       335 ~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~  413 (505)
                      +|+++++++. +.++++++.+||||+|||+|++|++|+++...+|.+.+|++++||.|||||.|.++.+++||||++|||
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            9999999753 568999999999999999999999999998878999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCC----C-CCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCe
Q 010661          414 AEEFLPDRFIDSTID----F-NGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGL  488 (505)
Q Consensus       414 p~~f~PeR~~~~~~~----~-~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  488 (505)
                      |++|+||||++++..    . ..++..|+|||+|+|+|||++||++|++++|++|+++|+|++.++..   ++.....++
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~  501 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKREF  501 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhcee
Confidence            999999999974321    1 12346899999999999999999999999999999999999876532   222222344


Q ss_pred             eeecCCCeeEeeccCC
Q 010661          489 TVSKKFPLILVPTLYL  504 (505)
Q Consensus       489 ~~~~~~~~~~~~~~r~  504 (505)
                      +..++.++.++.++|.
T Consensus       502 ~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        502 TTVMAKPLRARLVPRR  517 (519)
T ss_pred             EEeecCCcEEEEEecc
Confidence            5556667888887775


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=5.2e-78  Score=590.22  Aligned_cols=455  Identities=23%  Similarity=0.374  Sum_probs=357.8

Q ss_pred             CCCCCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccc
Q 010661           26 KNKLNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGD  105 (505)
Q Consensus        26 ~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (505)
                      +.....+|||+++|++||+..+..+++..+.+++++||++|++++++.++|+++||+++++++.++...|..++......
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            34567789999999999998887788999999999999999999999999999999999999998766676665443322


Q ss_pred             hhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHH
Q 010661          106 IIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARS  185 (505)
Q Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~  185 (505)
                      ... .+.++ ++.+|+.|+++|+++ .+.|+...++.+.+.+.+.++.+++.+.+....++.+|+.+++..+++|+++.+
T Consensus       105 ~~~-~~~~l-~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        105 HGT-FYHGI-VTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             eec-cCCce-eccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence            111 24444 455799999999997 788999999999999999999999999765445677999999999999999999


Q ss_pred             Hhcccchhccc--CCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 010661          186 VLGRRVEEETA--GGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEIS  263 (505)
Q Consensus       186 ~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  263 (505)
                      +||.+++..+.  ......+.+.+..+............++.+....  ........+..+.+.+++.+.+++++++.. 
T Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  258 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY--YQYLEHTDKNFKKIKKFIKEKYHEHLKTID-  258 (482)
T ss_pred             HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHccC-
Confidence            99998864211  0111345554444443322211112222211110  011223345566777788887777655421 


Q ss_pred             CCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC
Q 010661          264 DEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKH  343 (505)
Q Consensus       264 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  343 (505)
                           ....+|+++.|+++..+.   +....+++++++..+++||+|||+.+++|++++|++||++|+|+++|+++++++
T Consensus       259 -----~~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~  330 (482)
T PTZ00404        259 -----PEVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG  330 (482)
T ss_pred             -----CCCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC
Confidence                 123579999999864221   122334588999999999999999999999999999999999999999999987


Q ss_pred             CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccc-cCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCcc
Q 010661          344 KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNL-RGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRF  422 (505)
Q Consensus       344 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~  422 (505)
                      +..++++++++||||+|||+|+||++|+++...+|.+.+|+++ +|+.|||||.|.++.+++||||++||||++|+||||
T Consensus       331 ~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRw  410 (482)
T PTZ00404        331 RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRF  410 (482)
T ss_pred             CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcccc
Confidence            6778999999999999999999999999998667999999999 999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeecc
Q 010661          423 IDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPTL  502 (505)
Q Consensus       423 ~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (505)
                      ++..     .+..|+|||+|+|.|+|++||++|+++++++|+++|+|+..++..   .......++++. +.++++.+++
T Consensus       411 l~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~  481 (482)
T PTZ00404        411 LNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEYGLTLK-PNKFKVLLEK  481 (482)
T ss_pred             CCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccccceeec-CCCceeeeec
Confidence            8742     356899999999999999999999999999999999999866532   212224456665 5568888777


Q ss_pred             C
Q 010661          503 Y  503 (505)
Q Consensus       503 r  503 (505)
                      |
T Consensus       482 R  482 (482)
T PTZ00404        482 R  482 (482)
T ss_pred             C
Confidence            6


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.6e-77  Score=588.52  Aligned_cols=470  Identities=31%  Similarity=0.541  Sum_probs=356.7

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCC-chHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccc
Q 010661           25 NKNKLNLPPSPPRLPIIGNLHQLGTL-RHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTA  103 (505)
Q Consensus        25 ~~~~~~~~pgp~~~p~lG~~~~~~~~-~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~  103 (505)
                      ..++.+.||||+++|++|++..+..+ .+..+.+++++||++|+++++++++|+|+||+.+++++.++...|.+++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            34567889999999999999888544 56889999999999999999999999999999999999987776776655443


Q ss_pred             cchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhcc-CCCceeHHHHHHHHHHHHH
Q 010661          104 GDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCF-NGGSVNLAEMLQTVANNII  182 (505)
Q Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~~i  182 (505)
                      .......+.+++++.+|+.|+++|+.+..++|+..+++.+.+.++++++++++.+..... .++.+++.+.+..+++|++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            333322244567777899999999998558899999999999999999999999976432 2456999999999999999


Q ss_pred             HHHHhcccchhcccCCchhHHHHHHHHHHHhhhc--cccccccccCccchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHh
Q 010661          183 ARSVLGRRVEEETAGGNSNKFGELSRRMMIQSAS--FCYRDLFPSLGWLDVVTGRIGRLKATAREFDA-LFDQVIEEHRK  259 (505)
Q Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~~~~  259 (505)
                      ++++||.+++..+. .....+.............  ..+..++|.+.+.  .....+........... +....++++++
T Consensus       185 ~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        185 YRMMFDRRFESEDD-PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHhCCCcccccc-hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999864211 1111111222211111111  1112233432211  01111112222222222 33445666554


Q ss_pred             ccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHH
Q 010661          260 SEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRR  339 (505)
Q Consensus       260 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  339 (505)
                      ........ .....|+++.|+++..++    .++++++..++.++++||+|||+.+++|++|+|++||++|+|+++|+++
T Consensus       262 ~~~~~~~~-~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~  336 (503)
T PLN02394        262 LMSAKGMD-KEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDT  336 (503)
T ss_pred             HhhhccCC-cchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            32111001 123478999999875432    5899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCC
Q 010661          340 VVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLP  419 (505)
Q Consensus       340 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P  419 (505)
                      +++.+..++++++++||||+|||+|+||++|+++...+|.+.+|++++||.||+||.|.+++|++||||++|+||++|+|
T Consensus       337 v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~P  416 (503)
T PLN02394        337 VLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRP  416 (503)
T ss_pred             HhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCc
Confidence            99876678999999999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             CccccCCCC--CCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccC-eeeecCCCe
Q 010661          420 DRFIDSTID--FNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFG-LTVSKKFPL  496 (505)
Q Consensus       420 eR~~~~~~~--~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  496 (505)
                      |||++++..  .......|+|||+|+|+|+|++||++|+++++|+|+++|+|++.++..  .++.....+ .....+.++
T Consensus       417 eRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  494 (503)
T PLN02394        417 ERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHS  494 (503)
T ss_pred             cccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCc
Confidence            999975432  122456899999999999999999999999999999999999876642  233332232 444355588


Q ss_pred             eEeeccCC
Q 010661          497 ILVPTLYL  504 (505)
Q Consensus       497 ~~~~~~r~  504 (505)
                      ++++.+|-
T Consensus       495 ~~~~~~r~  502 (503)
T PLN02394        495 TVVFKPRS  502 (503)
T ss_pred             eEEeecCC
Confidence            88888874


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=8.1e-77  Score=586.30  Aligned_cols=457  Identities=23%  Similarity=0.359  Sum_probs=356.3

Q ss_pred             CCCCCCCCCCCCCccccccccCC-------------------CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHH
Q 010661           26 KNKLNLPPSPPRLPIIGNLHQLG-------------------TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITRE   86 (505)
Q Consensus        26 ~~~~~~~pgp~~~p~lG~~~~~~-------------------~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~   86 (505)
                      ....+.||||+++|++||++++.                   .+....+.+|+++||++|++++|+.++|+++||+.+++
T Consensus        38 ~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~  117 (516)
T PLN02290         38 IMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKE  117 (516)
T ss_pred             HHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHH
Confidence            33556799999999999987763                   12334578899999999999999999999999999999


Q ss_pred             HHHhcCccccCCCCccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCC-
Q 010661           87 IIKNHDIVFANRPKNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNG-  165 (505)
Q Consensus        87 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-  165 (505)
                      ++.++.. +..++...........+.++ +..+|+.|+++|+++ .+.|+..+++.+.+.+.++++.+++.+.+....+ 
T Consensus       118 il~~~~~-~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  194 (516)
T PLN02290        118 LLTKYNT-VTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQ  194 (516)
T ss_pred             HHhcCCC-CCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9997633 43443221111111124444 445699999999997 7889999999999999999999999997654333 


Q ss_pred             CceeHHHHHHHHHHHHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHH
Q 010661          166 GSVNLAEMLQTVANNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATARE  245 (505)
Q Consensus       166 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~  245 (505)
                      ..+|+.+++..++++++++++||.++..      .+++.+....+............+|.+.++.  .+..++.....+.
T Consensus       195 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~  266 (516)
T PLN02290        195 TEVEIGEYMTRLTADIISRTEFDSSYEK------GKQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGE  266 (516)
T ss_pred             ceEEhHHHHHHHHHHHHHHHHcCCcccc------chHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHH
Confidence            5799999999999999999999998752      2233333333332221111112234333221  1223445667778


Q ss_pred             HHHHHHHHHHHHHhccccCCCCCCCccchHHHHHHhhcccC-CcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHh
Q 010661          246 FDALFDQVIEEHRKSEISDEDNDQSDEKDLVHTILKLQKDG-RLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELV  324 (505)
Q Consensus       246 l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~  324 (505)
                      +.+++.+.|+++++....+..  ....+|+++.+++...+. ..+..++++++.+++.++++||+|||+.+++|++++|+
T Consensus       267 ~~~~~~~~i~~~~~~~~~~~~--~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~  344 (516)
T PLN02290        267 VERLLMEIIQSRRDCVEIGRS--SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLA  344 (516)
T ss_pred             HHHHHHHHHHHHHHHhhcccC--CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence            889999999888765422111  123579999999864322 11235889999999999999999999999999999999


Q ss_pred             hCchhHHHHHHHHHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhh
Q 010661          325 KNPKLMKKTQEEVRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAI  404 (505)
Q Consensus       325 ~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~  404 (505)
                      +||++|+|+++|++++++++ .++++++++||||+|||+||||++|+++.+ +|.+.+|++++|+.||+||.|.++.+++
T Consensus       345 ~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IP~Gt~V~~~~~~~  422 (516)
T PLN02290        345 SNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIKLGDLHIPKGLSIWIPVLAI  422 (516)
T ss_pred             cCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCeeECCEEECCCCEEEecHHHh
Confidence            99999999999999999864 789999999999999999999999999975 7999999999999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcc
Q 010661          405 QRDPKVW-NRAEEFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMT  483 (505)
Q Consensus       405 ~~d~~~~-~~p~~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~  483 (505)
                      ||||++| +||++|+||||+++..   .....|+|||.|+|.|+|++||++|+++++++|+++|+|++.++..     ..
T Consensus       423 ~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~  494 (516)
T PLN02290        423 HHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HA  494 (516)
T ss_pred             cCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cC
Confidence            9999999 8999999999995421   1345799999999999999999999999999999999999876532     11


Q ss_pred             cccCeeeecCCCeeEeeccCCC
Q 010661          484 EVFGLTVSKKFPLILVPTLYLP  505 (505)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~r~~  505 (505)
                      ...+++..|+.++++++++|-+
T Consensus       495 ~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        495 PVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             ccceeeecCCCCCeEEEEeCCC
Confidence            1235677888889999888854


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=5.2e-77  Score=576.90  Aligned_cols=457  Identities=27%  Similarity=0.452  Sum_probs=363.4

Q ss_pred             CCCCCCCCCCCccccccccCCC---CchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 010661           28 KLNLPPSPPRLPIIGNLHQLGT---LRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAG  104 (505)
Q Consensus        28 ~~~~~pgp~~~p~lG~~~~~~~---~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  104 (505)
                      ....+|||+++|++|++.++.+   +...++.++..+||++|+.|++|.++|+++||+.+++|+.++...+...+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5567899999999999988832   4667889999999999999999999999999999999997555444444443322


Q ss_pred             chhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010661          105 DIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIAR  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  184 (505)
                      .. ...|.+++++. |+.|+++||++ .+.|+...++.+.+.+.+++..+...+..... ++.+|+.+.++++++|+++.
T Consensus       113 ~~-~~lG~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LK-PWLGDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HH-HHhcCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHHH
Confidence            21 22356777777 99999999997 89999999999999999999998887776432 33399999999999999999


Q ss_pred             HHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccc-cCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 010661          185 SVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFP-SLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEIS  263 (505)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  263 (505)
                      ++||......+. ....++.+....+...+   ..+...| +..++..+. ..++..++.+.+.+++++.|+++++....
T Consensus       189 ~~~G~~~~~~~~-~~~~~~~~a~~~~~~~~---~~~~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~~~  263 (497)
T KOG0157|consen  189 TAMGPESLDAEG-PELFEYVQAFDDLTELI---SKRINLPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRERREELEK  263 (497)
T ss_pred             HhcCCccccccC-CcccHHHHHHHHHHHHH---HHHHcCchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999922211000 12224444444333322   2233344 333333332 66788889999999999999999976543


Q ss_pred             CCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC
Q 010661          264 DEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKH  343 (505)
Q Consensus       264 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  343 (505)
                      ++..+.....|+++.+.....     ..+++++|.+++.+|++||+|||+.+++|++++|+.||++|+|+++|+++++++
T Consensus       264 ~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  264 EGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             cCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            222112446788886333222     279999999999999999999999999999999999999999999999999985


Q ss_pred             CCC-CChhhccCChhHHHHHHHhcCCCCCCcccccccccccccc-cCeeeCCCCEEEecchhhccCCCCCC-CCCCCCCC
Q 010661          344 KSS-INVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNL-RGYDIPANTTTYINAWAIQRDPKVWN-RAEEFLPD  420 (505)
Q Consensus       344 ~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~Pe  420 (505)
                      ... ++..+.++|+||++||+|||||||++|... |.+.+|+++ +|+.||||+.|.++++++|||+++|+ ||++||||
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~Pe  417 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPE  417 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcc
Confidence            433 233333479999999999999999999996 999999999 58999999999999999999999996 99999999


Q ss_pred             ccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEee
Q 010661          421 RFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVP  500 (505)
Q Consensus       421 R~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (505)
                      ||+++......++++|+|||+|+|.|+|++||++|+|+++++|+++|+|++..+..     ......++.+++.++.+++
T Consensus       418 Rf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~  492 (497)
T KOG0157|consen  418 RFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKL  492 (497)
T ss_pred             ccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEE
Confidence            99975433345679999999999999999999999999999999999999877642     4556788899999999999


Q ss_pred             ccCC
Q 010661          501 TLYL  504 (505)
Q Consensus       501 ~~r~  504 (505)
                      ++|.
T Consensus       493 ~~r~  496 (497)
T KOG0157|consen  493 RPRG  496 (497)
T ss_pred             EeCC
Confidence            9985


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=7.8e-76  Score=570.76  Aligned_cols=456  Identities=26%  Similarity=0.431  Sum_probs=362.1

Q ss_pred             CCCCCCCccccccccCC-CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccchhccC
Q 010661           32 PPSPPRLPIIGNLHQLG-TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGDIIFYA  110 (505)
Q Consensus        32 ~pgp~~~p~lG~~~~~~-~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  110 (505)
                      ||||+++|++||++++. .+++..+.+|+++||++|+++++++++|+|+||+++++|+.++...|.+++...........
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998884 55889999999999999999999999999999999999999888888776544333322211


Q ss_pred             CcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhcc--CCCceeHHHHHHHHHHHHHHHHHhc
Q 010661          111 SKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCF--NGGSVNLAEMLQTVANNIIARSVLG  188 (505)
Q Consensus       111 ~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~~i~~~~fG  188 (505)
                      +..+.+..+|+.|+++|+.+..++++...++.+.+.+.+.++.+++.+.+...  .++++|+.+.+..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22244445699999999987788898888888999998998888888865432  4578999999999999999999999


Q ss_pred             ccchhcccCCch------hHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 010661          189 RRVEEETAGGNS------NKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEI  262 (505)
Q Consensus       189 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (505)
                      .++.....++..      +.+......+........+.+++|.++|+.. ....+...+....+.+++.+.+++++++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            987653211111      1223333333333222233456776555421 112223333344556788888887775532


Q ss_pred             cCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010661          263 SDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVK  342 (505)
Q Consensus       263 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  342 (505)
                      .     ..+..|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       240 ~-----~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        240 R-----GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             C-----CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            1     123468999999764      15899999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCcc
Q 010661          343 HKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRF  422 (505)
Q Consensus       343 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~  422 (505)
                      +.. ++++++++||||+|||+|+||++|+++...+|.+.+|++++|+.|||||.|+++.+++||||++|+||++|+||||
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  387 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERF  387 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcccc
Confidence            754 9999999999999999999999999999878999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeecc
Q 010661          423 IDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPTL  502 (505)
Q Consensus       423 ~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (505)
                      ++++... .....++|||+|+|.|||++||..|+++++++||++|+|++.++.. +.   ....+++..++.++.+.+++
T Consensus       388 ~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~  462 (466)
T PLN02655        388 LGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPLHAHLKP  462 (466)
T ss_pred             CCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cc---cchhheeEeecCCcEEEEee
Confidence            9754221 2346899999999999999999999999999999999999876542 11   23456777788889998888


Q ss_pred             CCC
Q 010661          503 YLP  505 (505)
Q Consensus       503 r~~  505 (505)
                      |.+
T Consensus       463 r~~  465 (466)
T PLN02655        463 RGS  465 (466)
T ss_pred             cCC
Confidence            763


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2e-75  Score=572.15  Aligned_cols=425  Identities=22%  Similarity=0.364  Sum_probs=332.0

Q ss_pred             HhhccCCCCCCCCCCCCCCCccccccccCC-----CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCc
Q 010661           19 RLKHSRNKNKLNLPPSPPRLPIIGNLHQLG-----TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDI   93 (505)
Q Consensus        19 ~~~~~~~~~~~~~~pgp~~~p~lG~~~~~~-----~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~   93 (505)
                      +..++...++.+.||||+++|++||+..+.     ++++.++.+++++||++|++++|++++|+++||+++++++.+++.
T Consensus        27 ~~~~~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~  106 (490)
T PLN02500         27 LTKRRPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGR  106 (490)
T ss_pred             hCccccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCC
Confidence            333334455667899999999999976541     356678899999999999999999999999999999999998776


Q ss_pred             cccCCCCccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHH-hHhhHHHHHHHHHHHHHhhccCCCceeHHH
Q 010661           94 VFANRPKNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQS-LQYVNEEEVAIMTNKIRSSCFNGGSVNLAE  172 (505)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~  172 (505)
                      .|..+....... . . +.+.++..+|+.|+++|+.+ .+.|+..+++. +.+.+.+.+..+++.+..    ++.+|+.+
T Consensus       107 ~f~~~~~~~~~~-~-~-g~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~  178 (490)
T PLN02500        107 LFECSYPRSIGG-I-L-GKWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQD  178 (490)
T ss_pred             eEEeeCchHHHH-H-h-CcccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehH
Confidence            665432211111 1 1 22233444699999999998 68888888876 567777777777776643    45799999


Q ss_pred             HHHHHHHHHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHH
Q 010661          173 MLQTVANNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQ  252 (505)
Q Consensus       173 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~  252 (505)
                      .+..++++++++++||.+.+.    .....+.+....+......  ....+|.        ...++..++.+.+.+++.+
T Consensus       179 ~~~~~~~~vi~~~~fg~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~p~--------~~~~~~~~~~~~~~~~~~~  244 (490)
T PLN02500        179 EAKKFTFNLMAKHIMSMDPGE----EETEQLKKEYVTFMKGVVS--APLNFPG--------TAYRKALKSRATILKFIER  244 (490)
T ss_pred             HHHHHHHHHHHHHHhCCCCCc----hHHHHHHHHHHHHHhhhhc--chhcCCC--------cccHHHHHHHHHHHHHHHH
Confidence            999999999999999987642    1122233222222221111  1111221        1124455677888899999


Q ss_pred             HHHHHHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHH
Q 010661          253 VIEEHRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKK  332 (505)
Q Consensus       253 ~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~  332 (505)
                      .+++++++..++..  .....|+++.+++..       .++++++++++.++++||+|||+.+++|++++|++||++|+|
T Consensus       245 ~i~~~~~~~~~~~~--~~~~~d~l~~ll~~~-------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~k  315 (490)
T PLN02500        245 KMEERIEKLKEEDE--SVEEDDLLGWVLKHS-------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQE  315 (490)
T ss_pred             HHHHHHHhhhcccC--CCCcchHHHHHHhcc-------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHH
Confidence            99887764321111  123468999999741       589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC-----CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccC
Q 010661          333 TQEEVRRVVKH-----KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRD  407 (505)
Q Consensus       333 l~~Ei~~~~~~-----~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d  407 (505)
                      +++|++++++.     +..++++|+++|||++|||+|+||++|+++.. +|.+.+|++++||.|||||.|+++.|++|||
T Consensus       316 l~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrd  394 (490)
T PLN02500        316 LREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLD  394 (490)
T ss_pred             HHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccC
Confidence            99999998742     34589999999999999999999999999997 5999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccCCCCCC------CCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCC
Q 010661          408 PKVWNRAEEFLPDRFIDSTIDFN------GQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGA  475 (505)
Q Consensus       408 ~~~~~~p~~f~PeR~~~~~~~~~------~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~  475 (505)
                      |++|+||++|+||||++++....      ..+..|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++.
T Consensus       395 p~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~  468 (490)
T PLN02500        395 SSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD  468 (490)
T ss_pred             cccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC
Confidence            99999999999999997542211      135689999999999999999999999999999999999987653


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.8e-74  Score=564.85  Aligned_cols=469  Identities=23%  Similarity=0.377  Sum_probs=353.3

Q ss_pred             CCCCCCCCCCccccccccCC-CCch-HHHHHHHHhc-CCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccc
Q 010661           29 LNLPPSPPRLPIIGNLHQLG-TLRH-RSLKALSNKY-GPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGD  105 (505)
Q Consensus        29 ~~~~pgp~~~p~lG~~~~~~-~~~~-~~~~~~~~~y-G~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (505)
                      .+.||||+++|++||++++. ..+. .++.++.++| |+||++++|++++|+|+||+++++++.++...|.+++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            34789999999999998873 3332 4566667766 7999999999999999999999999998888888877554443


Q ss_pred             hhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHH
Q 010661          106 IIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARS  185 (505)
Q Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~  185 (505)
                      .....+.+++++.+|+.|+++|+++...+++......+.+...+++.++++.+.+....++++|+.+.+..+++++++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            33222235666667999999999985555555555556667677889999999764444567999999999999999999


Q ss_pred             HhcccchhcccCC-chhH----HHHHHHHHHHhhhc---cccccccc-cCccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 010661          186 VLGRRVEEETAGG-NSNK----FGELSRRMMIQSAS---FCYRDLFP-SLGWLDVVTGRIGRLKATAREFDALFDQVIEE  256 (505)
Q Consensus       186 ~fG~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~---~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  256 (505)
                      +||.++....... .+.+    +.............   ....+.+| ++.+. ...+...+.....+.+.+++.+.+++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGW-NIDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhh-cccchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999986432100 0111    22122222111111   11122233 22211 01122334444566788888999988


Q ss_pred             HHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHH
Q 010661          257 HRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEE  336 (505)
Q Consensus       257 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~E  336 (505)
                      +++......  ......|+++.+++...+++ ...++++++++++.++++||+|||+.+++|++++|+.||++|+|+++|
T Consensus       278 ~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        278 RVELWREKG--GKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHHHhhhcc--CCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            765421100  01224689999998654322 113899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCC
Q 010661          337 VRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEE  416 (505)
Q Consensus       337 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  416 (505)
                      |+++++.++.++.+++.+||||+|||+|+||++|+++...+|++.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       355 i~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~  434 (534)
T PLN03018        355 LDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLV  434 (534)
T ss_pred             HHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccc
Confidence            99999877789999999999999999999999999999877999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCC-----CCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeee
Q 010661          417 FLPDRFIDSTIDF-----NGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVS  491 (505)
Q Consensus       417 f~PeR~~~~~~~~-----~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (505)
                      |+||||++++...     ...+..|+|||+|+|.|||++||.+|+++++|+|+++|+|++.++..  +++.....+.+. 
T Consensus       435 F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~-  511 (534)
T PLN03018        435 YEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDASLL-  511 (534)
T ss_pred             cCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCcccccccee-
Confidence            9999999753211     12456899999999999999999999999999999999999876531  233333334443 


Q ss_pred             cCCCeeEeeccCC
Q 010661          492 KKFPLILVPTLYL  504 (505)
Q Consensus       492 ~~~~~~~~~~~r~  504 (505)
                      .+.++++++++|+
T Consensus       512 ~p~~~~v~~~~R~  524 (534)
T PLN03018        512 MAKPLLLSVEPRL  524 (534)
T ss_pred             cCCCeEEEEEecc
Confidence            4457888888875


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=6.2e-75  Score=563.97  Aligned_cols=432  Identities=21%  Similarity=0.281  Sum_probs=339.9

Q ss_pred             CCCCCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccc
Q 010661           26 KNKLNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGD  105 (505)
Q Consensus        26 ~~~~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (505)
                      ....+.||||+++|++||+..+.+++..++.+++++||++|+++++++++++++||+.+++++.++...|..........
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            34446789999999999998876777889999999999999999999999999999999999987766554332211111


Q ss_pred             hhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHH-hHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010661          106 IIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQS-LQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIAR  184 (505)
Q Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  184 (505)
                       . . +.+.+++.+|+.|+++|+.+ .+.|+...++. +.+.+.+.++++++++..    ++++|+.+.+..+++++++.
T Consensus       107 -~-l-g~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        107 -I-L-GTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             -H-h-CccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHHHH
Confidence             1 1 33344455799999999998 67899988876 788888888888887643    46799999999999999999


Q ss_pred             HHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccC
Q 010661          185 SVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISD  264 (505)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  264 (505)
                      ++||.+...     ..+++.+....+   ....   ..+|.  ++.  ....++..++.+.+.+++.+.+++++++.   
T Consensus       179 ~~~g~~~~~-----~~~~~~~~~~~~---~~~~---~~~~~--~lp--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---  240 (463)
T PLN02774        179 QIAGTLSKP-----ISEEFKTEFFKL---VLGT---LSLPI--DLP--GTNYRSGVQARKNIVRMLRQLIQERRASG---  240 (463)
T ss_pred             HHcCCCChH-----HHHHHHHHHHHH---hccc---ccCCc--CCC--ChhhhHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence            999976531     112222222111   1110   01111  110  11234566778889999999998876532   


Q ss_pred             CCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC-
Q 010661          265 EDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKH-  343 (505)
Q Consensus       265 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~-  343 (505)
                           ...+|+++.+++...++   ..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|++++++. 
T Consensus       241 -----~~~~d~l~~ll~~~~~~---~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~  312 (463)
T PLN02774        241 -----ETHTDMLGYLMRKEGNR---YKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERK  312 (463)
T ss_pred             -----CCcccHHHHHHhCccCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcc
Confidence                 23479999999743222   258999999999999999999999999999999999999999999999999864 


Q ss_pred             --CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCc
Q 010661          344 --KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDR  421 (505)
Q Consensus       344 --~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR  421 (505)
                        +..++++++++||||+|||+|+||++|+++.+ +|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+|||
T Consensus       313 ~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeR  391 (463)
T PLN02774        313 RPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWR  391 (463)
T ss_pred             CCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchh
Confidence              34689999999999999999999999999876 599999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeec
Q 010661          422 FIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPT  501 (505)
Q Consensus       422 ~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (505)
                      |++++..   ....|+|||+|+|.|||++||++|++++++.|+++|+|++.++....     ...  ++.|+.++.++++
T Consensus       392 fl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~-----~~~--~~~p~~g~~~~~~  461 (463)
T PLN02774        392 WLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM-----KFP--RVEAPNGLHIRVS  461 (463)
T ss_pred             cCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc-----cCC--CCCCCCCceEEee
Confidence            9975421   12369999999999999999999999999999999999997653211     111  2235667777765


Q ss_pred             c
Q 010661          502 L  502 (505)
Q Consensus       502 ~  502 (505)
                      +
T Consensus       462 ~  462 (463)
T PLN02774        462 P  462 (463)
T ss_pred             e
Confidence            3


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-74  Score=525.08  Aligned_cols=457  Identities=24%  Similarity=0.325  Sum_probs=377.1

Q ss_pred             CCCCCCCCCCCCccccccccC----CCCchHHHHHHHHhcCCeEEEE-ecCcceEEEcCHHHHHHHHHhcCccccCCC-C
Q 010661           27 NKLNLPPSPPRLPIIGNLHQL----GTLRHRSLKALSNKYGPLMFLH-LGHSPTLVVSSAEITREIIKNHDIVFANRP-K  100 (505)
Q Consensus        27 ~~~~~~pgp~~~p~lG~~~~~----~~~~~~~~~~~~~~yG~v~~i~-~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~-~  100 (505)
                      .+...+|||.++|++|.++..    ..+.++...+.+++|||||+.. +|+...|++.||++++.++++++. ++-++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            345568999999999998743    3577888899999999999999 888899999999999999997663 45553 2


Q ss_pred             ccccc--hhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhcc---CCCceeHHHHHH
Q 010661          101 NTAGD--IIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCF---NGGSVNLAEMLQ  175 (505)
Q Consensus       101 ~~~~~--~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~  175 (505)
                      ...+.  .-..++...++..+|++|.+.|..++..++++++++.+.+.+++.+++++..+....+   +..+.|+.+.+.
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence            22221  1123455567777899999999999989999999999999999999999999988755   345789999999


Q ss_pred             HHHHHHHHHHHhcccchhcccC--CchhHHHHHHHHHHHhhhccccccccc-cCccchhhhhhhhhHHHHHHHHHHHHHH
Q 010661          176 TVANNIIARSVLGRRVEEETAG--GNSNKFGELSRRMMIQSASFCYRDLFP-SLGWLDVVTGRIGRLKATAREFDALFDQ  252 (505)
Q Consensus       176 ~~~~~~i~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~l~~~~~~  252 (505)
                      +++++.||.++||.+++++..+  ++.+.|.+.+..++.....+   .+.| +++++  .++.++++.++.+.+.++.++
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~--~t~~wk~~~~~~D~i~~~~~~  280 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYF--PTKVWKDFVRAWDQIFDVGDK  280 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhC--CChHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998653  23456777777776655442   2233 23332  246788999999999999999


Q ss_pred             HHHHHHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHH
Q 010661          253 VIEEHRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKK  332 (505)
Q Consensus       253 ~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~  332 (505)
                      .|++..++.+.+.... .+..+.+..++..       .+++.+++..+++++++||.|||+.++.|+||+|++||++|++
T Consensus       281 ~Id~~l~~l~~~~~~~-~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~  352 (519)
T KOG0159|consen  281 YIDNALEELEKQDSAG-SEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQR  352 (519)
T ss_pred             HHHHHHHHHHhccccc-cchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHH
Confidence            9999888775433321 1223344444432       1689999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC-CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCC
Q 010661          333 TQEEVRRVVKH-KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVW  411 (505)
Q Consensus       333 l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~  411 (505)
                      |++|+.+++.+ +..++.+++.+||||.||||||+||||.++... |...+|.+++||.|||||.|.++++.+.+||++|
T Consensus       353 L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F  431 (519)
T KOG0159|consen  353 LREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYF  431 (519)
T ss_pred             HHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhC
Confidence            99999999987 678999999999999999999999999999996 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeee
Q 010661          412 NRAEEFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVS  491 (505)
Q Consensus       412 ~~p~~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (505)
                      ++|++|+||||++++. .+.++..++|||+|+|+|+||++|++|+.++||+|+++|+++..++.   +  +......+..
T Consensus       432 ~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~---p--v~~~~~~il~  505 (519)
T KOG0159|consen  432 PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE---P--VEYVYRFILV  505 (519)
T ss_pred             CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC---C--ccceeEEEEc
Confidence            9999999999999763 34578999999999999999999999999999999999999987753   2  3334455556


Q ss_pred             cCCCeeEeeccCC
Q 010661          492 KKFPLILVPTLYL  504 (505)
Q Consensus       492 ~~~~~~~~~~~r~  504 (505)
                      |..++.++.+.|.
T Consensus       506 P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  506 PNRPLRFKFRPRN  518 (519)
T ss_pred             CCCCcceeeeeCC
Confidence            7777887777664


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.6e-74  Score=562.00  Aligned_cols=453  Identities=17%  Similarity=0.276  Sum_probs=343.1

Q ss_pred             CCCCCCCCccccccccCCCCc---hHHHHHHHHhcCCeEE---EEecCcceEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 010661           31 LPPSPPRLPIIGNLHQLGTLR---HRSLKALSNKYGPLMF---LHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAG  104 (505)
Q Consensus        31 ~~pgp~~~p~lG~~~~~~~~~---~~~~~~~~~~yG~v~~---i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~  104 (505)
                      ..|||+++|++||+..+.++.   .+++.+..++||..++   +++|+.++|+|+||+++++|+.++...|.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            578999999999987763222   2334444455886655   6789999999999999999999876666654322211


Q ss_pred             chhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHh--HhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHH
Q 010661          105 DIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSL--QYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNII  182 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i  182 (505)
                        ....|.+++++ +|+.|+++||.+ .+.|+...+..+  .+.+.++++.+++.+.+...+++.+|+.+.+..+++|++
T Consensus       112 --~~~~g~gl~~~-~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        112 --FDVLGEGILTV-DFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             --HHhhcCccccc-CcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence              12224555554 599999999998 789988877643  366778888888888765445678999999999999999


Q ss_pred             HHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCcc-c-hhh-hhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 010661          183 ARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGW-L-DVV-TGRIGRLKATAREFDALFDQVIEEHRK  259 (505)
Q Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~-~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~  259 (505)
                      ++++||.+.++.+.+....++............   ...+.|++.+ + .++ .+..++..++.+.+.+++.+.|+++++
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~  264 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRK  264 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987643321222345544443332211   1122332211 0 111 234466778888999999999998876


Q ss_pred             ccccCCCCCCCccchHHHHHHhhcccC-CcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHH
Q 010661          260 SEISDEDNDQSDEKDLVHTILKLQKDG-RLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVR  338 (505)
Q Consensus       260 ~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  338 (505)
                      +....... ++..+|+++.+++..... ..+..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++
T Consensus       265 ~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~  343 (500)
T PLN02169        265 EEISRAET-EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEIN  343 (500)
T ss_pred             Hhhccccc-cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            42111110 122478999999864321 1112478899999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCccccccccccccc-ccCeeeCCCCEEEecchhhccCCCCC-CCCCC
Q 010661          339 RVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVN-LRGYDIPANTTTYINAWAIQRDPKVW-NRAEE  416 (505)
Q Consensus       339 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~-i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~  416 (505)
                      ++      ++++++.+||||+|||+||||+||++|... |.+.+|.+ ++|+.||||+.|.+++|++||||++| +||++
T Consensus       344 ~v------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~  416 (500)
T PLN02169        344 TK------FDNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALD  416 (500)
T ss_pred             hh------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhh
Confidence            87      468999999999999999999999999987 77666655 59999999999999999999999999 89999


Q ss_pred             CCCCccccCCCCCC-CCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCC
Q 010661          417 FLPDRFIDSTIDFN-GQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFP  495 (505)
Q Consensus       417 f~PeR~~~~~~~~~-~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (505)
                      |+||||++++.... ..+..|+|||+|+|+|+|++||++|+|+++|+|+++|+|+++++.   ++  ....++++.++.+
T Consensus       417 F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~l~~~~g  491 (500)
T PLN02169        417 FKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSILLRMKHG  491 (500)
T ss_pred             cCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceEEecCCC
Confidence            99999997543322 236789999999999999999999999999999999999987543   22  2345577788899


Q ss_pred             eeEeeccC
Q 010661          496 LILVPTLY  503 (505)
Q Consensus       496 ~~~~~~~r  503 (505)
                      +.+++++|
T Consensus       492 l~l~l~~~  499 (500)
T PLN02169        492 LKVTVTKK  499 (500)
T ss_pred             EEEEEEeC
Confidence            99999887


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.9e-74  Score=566.71  Aligned_cols=459  Identities=19%  Similarity=0.267  Sum_probs=344.3

Q ss_pred             CCCCCCCCccccccccCCCCchHHHHHHHHhc---CCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccchh
Q 010661           31 LPPSPPRLPIIGNLHQLGTLRHRSLKALSNKY---GPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGDII  107 (505)
Q Consensus        31 ~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~y---G~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~  107 (505)
                      .+|||+++|++||++.+..+ +..+.++.++|   |++|++++++++.|+++||+++++|+.++...|.+......... 
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~-  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME-  108 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH-
Confidence            47899999999998765333 34566777777   89999999999999999999999999876444544322111110 


Q ss_pred             ccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhH-HHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHH
Q 010661          108 FYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVN-EEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARSV  186 (505)
Q Consensus       108 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  186 (505)
                      ...+.+ +++.+|+.|+++|+.+ .+.|+..+++.+.+.+ .+.++.+.+.+.+...+++++|+.++++.+++++++.++
T Consensus       109 ~~~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        109 VLLGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             HHhcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            112344 4556799999999997 7889999999998875 666777887776543346789999999999999999999


Q ss_pred             hcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhccccCC
Q 010661          187 LGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVV-TGRIGRLKATAREFDALFDQVIEEHRKSEISDE  265 (505)
Q Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (505)
                      ||.+++..+.+.....+.+..........   .....|.+.....+ ....+...+..+.+.+++.+.+++++++...+.
T Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        187 FGVEIGTLSPSLPENPFAQAFDTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             hCCCccccccCCCccHHHHHHHHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99998754321122344444333222110   11111211100000 112234456777888889999988876532111


Q ss_pred             CCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC--
Q 010661          266 DNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKH--  343 (505)
Q Consensus       266 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~--  343 (505)
                      ........|+++.+++...++  +..++++++.++++++++||+|||+.+++|++|+|++||++|+|+++|+++++++  
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             cccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence            101123568999999764332  2369999999999999999999999999999999999999999999999998743  


Q ss_pred             ------------------CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccc-cCeeeCCCCEEEecchhh
Q 010661          344 ------------------KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNL-RGYDIPANTTTYINAWAI  404 (505)
Q Consensus       344 ------------------~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~  404 (505)
                                        ++.++++++.+||||+|||+|+||++|+++... |.+.+|..+ +|+.|||||.|.++.+++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~  420 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSM  420 (516)
T ss_pred             ccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhh
Confidence                              245899999999999999999999999999985 767776665 999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcc
Q 010661          405 QRDPKVW-NRAEEFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMT  483 (505)
Q Consensus       405 ~~d~~~~-~~p~~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~  483 (505)
                      ||||++| +||++|+||||++++......+..|+|||+|+|.|+|++||++|+++++|.|+++|+|++.++.   ++.. 
T Consensus       421 h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~-  496 (516)
T PLN03195        421 GRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---PVKY-  496 (516)
T ss_pred             ccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---ccee-
Confidence            9999999 9999999999996432122345689999999999999999999999999999999999986543   2222 


Q ss_pred             cccCeeeecCCCeeEeeccCC
Q 010661          484 EVFGLTVSKKFPLILVPTLYL  504 (505)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~r~  504 (505)
                       ....+..++.++++++++|.
T Consensus       497 -~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        497 -RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             -eeeeEEecCCCEEEEEEeCC
Confidence             23345668888999998874


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.7e-73  Score=551.01  Aligned_cols=430  Identities=20%  Similarity=0.313  Sum_probs=345.3

Q ss_pred             CCCCCCCCCCCCCCCccccccccC-CCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCcc
Q 010661           24 RNKNKLNLPPSPPRLPIIGNLHQL-GTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNT  102 (505)
Q Consensus        24 ~~~~~~~~~pgp~~~p~lG~~~~~-~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~  102 (505)
                      ....+.+.||||+++|++|++..+ ..+++.++.+++++||++++++++++++|+++||+++++|+.++...|.  +...
T Consensus        29 ~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~  106 (463)
T PLN02196         29 SSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFP  106 (463)
T ss_pred             CCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCc
Confidence            334456778999999999998775 6789999999999999999999999999999999999999988766553  2222


Q ss_pred             ccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHH
Q 010661          103 AGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNII  182 (505)
Q Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i  182 (505)
                      ...... .+...++..+|+.|+++|+++ .+.|++++++.+.+.+.++++++++.+.     ++.+|+.++++.++++++
T Consensus       107 ~~~~~~-~g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~  179 (463)
T PLN02196        107 ASKERM-LGKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVA  179 (463)
T ss_pred             hHHHHH-cCcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHH
Confidence            111111 233344556799999999998 6789999999999999999999988773     357999999999999999


Q ss_pred             HHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 010661          183 ARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEI  262 (505)
Q Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (505)
                      +.++||.+...     ..+.+.+........      ...+|+...    ....++..++.+.+.+++.+.+++++++. 
T Consensus       180 ~~~~fG~~~~~-----~~~~~~~~~~~~~~~------~~~~~~~~p----~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-  243 (463)
T PLN02196        180 LLSIFGKDEVL-----YREDLKRCYYILEKG------YNSMPINLP----GTLFHKSMKARKELAQILAKILSKRRQNG-  243 (463)
T ss_pred             HHHHcCCCCch-----HHHHHHHHHHHHhcc------hhcccccCC----CccchHHHHHHHHHHHHHHHHHHHHhhcC-
Confidence            99999987531     122222222211111      011222110    01234566778888999999998876542 


Q ss_pred             cCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010661          263 SDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVK  342 (505)
Q Consensus       263 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  342 (505)
                             .+..|+++.+++.   +   ..++++++.++++++++||+|||+.+++|++++|++||++|+|+++|++++.+
T Consensus       244 -------~~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~  310 (463)
T PLN02196        244 -------SSHNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRK  310 (463)
T ss_pred             -------CCcccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence                   2346899988853   1   25899999999999999999999999999999999999999999999999986


Q ss_pred             C---CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCC
Q 010661          343 H---KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLP  419 (505)
Q Consensus       343 ~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P  419 (505)
                      .   ++.++++++++||||+|||+|+||++|+++... |.+.+|++++||.||||+.|+++.+++||||++|+||++|+|
T Consensus       311 ~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~P  389 (463)
T PLN02196        311 DKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDP  389 (463)
T ss_pred             ccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccCh
Confidence            4   356899999999999999999999999999986 999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEe
Q 010661          420 DRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILV  499 (505)
Q Consensus       420 eR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (505)
                      |||+++.     .+..++|||+|+|.|+|+++|++|+++++++|+++|+|++.++..  +  .  ....+..|+.++.++
T Consensus       390 eRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~--~--~~~~~~~p~~~~~~~  458 (463)
T PLN02196        390 SRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--G--I--QYGPFALPQNGLPIA  458 (463)
T ss_pred             hhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--c--e--EEcccccCCCCceEE
Confidence            9998632     346899999999999999999999999999999999999876421  2  2  223344577888888


Q ss_pred             eccC
Q 010661          500 PTLY  503 (505)
Q Consensus       500 ~~~r  503 (505)
                      ++.+
T Consensus       459 ~~~~  462 (463)
T PLN02196        459 LSRK  462 (463)
T ss_pred             EecC
Confidence            7654


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.4e-74  Score=569.29  Aligned_cols=433  Identities=32%  Similarity=0.562  Sum_probs=355.8

Q ss_pred             CCCCCCCccccccccCC--CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccch--h
Q 010661           32 PPSPPRLPIIGNLHQLG--TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGDI--I  107 (505)
Q Consensus        32 ~pgp~~~p~lG~~~~~~--~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~--~  107 (505)
                      ||||+++|++||...+.  ++++.++.+++++||+||+++++++++++|+||+.+++|+.++...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  6788999999999999999999999999999999999999988766665533333322  1


Q ss_pred             ccCCcceEeccCChhHHHHHHHHhcccCcHH-HHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHH
Q 010661          108 FYASKDIGFSNYGEYWREGRKACVLGLLSNK-KVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARSV  186 (505)
Q Consensus       108 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  186 (505)
                      ...+.++ +..+|+.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++.+++.+.+....++.+|+.++++.+++++++.++
T Consensus        81 ~~~~~~l-~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGL-FFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSS-TTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-ccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1224444 444589999999998 5666666 56 899999999999999999876656689999999999999999999


Q ss_pred             hcccchhcccCCchhHHHHHHHHHHHhhhcc--ccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccC
Q 010661          187 LGRRVEEETAGGNSNKFGELSRRMMIQSASF--CYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISD  264 (505)
Q Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  264 (505)
                      ||.++++.+. ....++.+....+...+...  .+...+|++.++.  ....+...++.+.+.+++.+.+++++++...+
T Consensus       158 fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (463)
T PF00067_consen  158 FGKDFGSLDD-EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDDG  234 (463)
T ss_dssp             HSSHHHGTTH-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS
T ss_pred             ccceeeeccc-ccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc
Confidence            9999874321 11234555555554433221  2334455443331  23455666777889999999999988876421


Q ss_pred             CCCCCCccchHHHHHHhhc-ccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcC
Q 010661          265 EDNDQSDEKDLVHTILKLQ-KDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKH  343 (505)
Q Consensus       265 ~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  343 (505)
                          .....|+++.++... ...+ +..++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|+++++++
T Consensus       235 ----~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  309 (463)
T PF00067_consen  235 ----DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD  309 (463)
T ss_dssp             ----SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT
T ss_pred             ----cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                235789999999986 2221 1379999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccc
Q 010661          344 KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRFI  423 (505)
Q Consensus       344 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~  423 (505)
                      ++.++.+++++||||+|||+||+|++|+++...+|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+||||+
T Consensus       310 ~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  310 GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77899999999999999999999999999965679999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCC
Q 010661          424 DSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGA  475 (505)
Q Consensus       424 ~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~  475 (505)
                      +.+......+..|+|||+|+|.|||++||++|++++||+||++|||++.++.
T Consensus       390 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~  441 (463)
T PF00067_consen  390 DERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGS  441 (463)
T ss_dssp             TTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTS
T ss_pred             ccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCC
Confidence            9865334567899999999999999999999999999999999999997654


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.5e-72  Score=556.84  Aligned_cols=438  Identities=23%  Similarity=0.381  Sum_probs=334.8

Q ss_pred             CCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccchhccCCcceEeccCChhHHHHH
Q 010661           48 GTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGDIIFYASKDIGFSNYGEYWREGR  127 (505)
Q Consensus        48 ~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R  127 (505)
                      .+.++..+.+++++|||||++++|+.++|+|+||+.+++|+.++...|.+++.......  ..+.++ +..+|+.|+.+|
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~--~~g~~l-~~~dge~wr~rR  226 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEF--VMGKGL-IPADGEIWRVRR  226 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhh--ccCCce-ecCCcHHHHHHH
Confidence            45577889999999999999999999999999999999999977666665432211111  123444 455699999999


Q ss_pred             HHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhcccchhcccCCchhHHHHHH
Q 010661          128 KACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARSVLGRRVEEETAGGNSNKFGELS  207 (505)
Q Consensus       128 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  207 (505)
                      +.+ .++|+...++.+.+.+.++++.+++++.+...+++++|+.+.++.+++|+|+.++||.+++....   .+.+...+
T Consensus       227 r~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~---~~~~~~~~  302 (633)
T PLN02738        227 RAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN---DTGIVEAV  302 (633)
T ss_pred             Hhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc---chHHHHHH
Confidence            997 78899999999999999999999999987655678999999999999999999999999875421   22333322


Q ss_pred             HHHHHhhhccccccccccCccc-hhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccCC-----CCCCCccchHHHHHHh
Q 010661          208 RRMMIQSASFCYRDLFPSLGWL-DVVTGRIGRLKATAREFDALFDQVIEEHRKSEISDE-----DNDQSDEKDLVHTILK  281 (505)
Q Consensus       208 ~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-----~~~~~~~~d~l~~ll~  281 (505)
                      ..............++++...+ ..++...++..+..+.+.++..++++.+++......     ........|+++.|++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~  382 (633)
T PLN02738        303 YTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLA  382 (633)
T ss_pred             HHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHH
Confidence            2222211110111111111111 111222344445555666666666655433211000     0001234689999987


Q ss_pred             hcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCCCCChhhccCChhHHHH
Q 010661          282 LQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKHKSSINVDDINQMNYLKCV  361 (505)
Q Consensus       282 ~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  361 (505)
                      ..      ..++++++.+++..+++||+|||+.+++|++++|++||++|+|+|+|+++++++ +.++++++++||||+||
T Consensus       383 ~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AV  455 (633)
T PLN02738        383 SG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRV  455 (633)
T ss_pred             cC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHH
Confidence            52      258999999999999999999999999999999999999999999999999984 66899999999999999


Q ss_pred             HHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccCCC--CCCCCccccccc
Q 010661          362 IKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRFIDSTI--DFNGQNFEFIPF  439 (505)
Q Consensus       362 i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~~~~~--~~~~~~~~~~pF  439 (505)
                      |+|+||+||+++.+. |++.+|++++||.||+||.|.++.|.+||||++||||++|+||||+++..  ........|+||
T Consensus       456 IkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpF  534 (633)
T PLN02738        456 INESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPF  534 (633)
T ss_pred             HHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCC
Confidence            999999999999975 99999999999999999999999999999999999999999999985321  112245689999


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeeccCC
Q 010661          440 GAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPTLYL  504 (505)
Q Consensus       440 g~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  504 (505)
                      |.|+|.|+|++||++|++++||+|+++|+|++.++..  ++  ....+.++.++.++++++++|-
T Consensus       535 G~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~--~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        535 GGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PV--KMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Cc--ccccceEEeeCCCcEEEEEECC
Confidence            9999999999999999999999999999999976642  22  2233556667777888877763


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=9.4e-72  Score=540.57  Aligned_cols=438  Identities=20%  Similarity=0.294  Sum_probs=341.2

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCC
Q 010661           26 KNKLNLPPSPPRLPIIGNLHQL-----GTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPK  100 (505)
Q Consensus        26 ~~~~~~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~  100 (505)
                      .++.+.||||.++|++||++.+     ..+++.++.+++++||+||++++++++.|+++||+++++++.++...|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4566789999999999998887     24688899999999999999999999999999999999999988777764432


Q ss_pred             ccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHH-hHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHH
Q 010661          101 NTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQS-LQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVAN  179 (505)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  179 (505)
                      . .....  .|.+.++..+|+.|+++|+++ .+.|+...+.. +.+.+.+.+.++++.+.    .++.+++.+.+..+++
T Consensus        83 ~-~~~~l--~g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTEL--MGKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHHH--hCcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence            1 12112  133345556799999999997 56677666665 35566666666665543    3568999999999999


Q ss_pred             HHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 010661          180 NIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRK  259 (505)
Q Consensus       180 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  259 (505)
                      +++++++||.+.+.     ....+.+.+..+.....      .+|..  +.  .....+..++.+++.+++.+.|++++.
T Consensus       155 ~vi~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~------~~~~~--~p--~~~~~~~~~~~~~l~~~~~~~i~~~~~  219 (452)
T PLN03141        155 EVLVKALISLEPGE-----EMEFLKKEFQEFIKGLM------SLPIK--LP--GTRLYRSLQAKKRMVKLVKKIIEEKRR  219 (452)
T ss_pred             HHHHHHHcCCCchH-----HHHHHHHHHHHHhhhHH------hCccC--CC--chHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987641     22233333332222111      11211  10  012234556788899999999988876


Q ss_pred             ccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHH
Q 010661          260 SEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRR  339 (505)
Q Consensus       260 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  339 (505)
                      ....+.........|+++.+++...     ..+++++++++++.+++||+|||+.+++|++++|+.||++|+++++|+++
T Consensus       220 ~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~  294 (452)
T PLN03141        220 AMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMK  294 (452)
T ss_pred             HHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            5421110000124689999997541     25899999999999999999999999999999999999999999999998


Q ss_pred             Hhc----CCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCC
Q 010661          340 VVK----HKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAE  415 (505)
Q Consensus       340 ~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  415 (505)
                      +++    .+..++.+++.+||||+|||+|++|++|+++.+ +|.+.+|++++||.||||+.|+++.+++|+||++|+||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~  373 (452)
T PLN03141        295 LKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPY  373 (452)
T ss_pred             HHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCcc
Confidence            864    234589999999999999999999999999865 699999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCC
Q 010661          416 EFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFP  495 (505)
Q Consensus       416 ~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (505)
                      +|+||||++++.    .+..|+|||+|+|.|+|++||.+|+++++|+|+++|+|+.+++..   . .    ..++.++.+
T Consensus       374 ~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~---~-~----~~~~~~~~~  441 (452)
T PLN03141        374 QFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI---V-N----FPTVRMKRK  441 (452)
T ss_pred             ccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe---e-e----cccccCCCC
Confidence            999999997532    356899999999999999999999999999999999999865421   1 1    135667788


Q ss_pred             eeEeeccCC
Q 010661          496 LILVPTLYL  504 (505)
Q Consensus       496 ~~~~~~~r~  504 (505)
                      +.+++++|-
T Consensus       442 ~~~~~~~~~  450 (452)
T PLN03141        442 LPIWVTRID  450 (452)
T ss_pred             ceEEEEeCC
Confidence            888888874


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=5.2e-71  Score=543.75  Aligned_cols=439  Identities=21%  Similarity=0.332  Sum_probs=342.5

Q ss_pred             CCCCCCCCCCCCCCccccccccC-----CCCchHHHHHHHHhcCC--eEEEEecCcceEEEcCHHHHHHHHHhcCccccC
Q 010661           25 NKNKLNLPPSPPRLPIIGNLHQL-----GTLRHRSLKALSNKYGP--LMFLHLGHSPTLVVSSAEITREIIKNHDIVFAN   97 (505)
Q Consensus        25 ~~~~~~~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~--v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~   97 (505)
                      ...+.+.||||+++|++|+++++     ..+++.++.+++++||+  +|++++++.+.|+++||+++++|+.++. .|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            34455789999999999998876     34788899999999997  7999999999999999999999998663 4443


Q ss_pred             CCCccccchhccCCcceEeccCChhHHHHHHHHhcccC-cHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHH
Q 010661           98 RPKNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLL-SNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQT  176 (505)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  176 (505)
                      +.......   ..+.+.+...+|+.|+++|+.+ .+.| +.+.++.+.+.+.+++.++++.+..    ++.+|+.+.+..
T Consensus       116 ~~~~~~~~---~~g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVE---LIGRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHH---HhccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            32221111   1233444455699999999998 5555 5788999999999999999998853    346999999999


Q ss_pred             HHHHHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 010661          177 VANNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEE  256 (505)
Q Consensus       177 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  256 (505)
                      ++++++++++||.++..     ..+.+......+......  ....+|.        ...++..++.+.+.+++.+.+++
T Consensus       188 ~~~~vi~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~p~--------~~~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        188 LTFKIIMYIFLSSESEL-----VMEALEREYTTLNYGVRA--MAINLPG--------FAYHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHHHHHcCCCChH-----HHHHHHHHHHHHHHHhhh--CCcCCCc--------hhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987652     122222222211111110  0001121        11234455667888899999988


Q ss_pred             HHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHH
Q 010661          257 HRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEE  336 (505)
Q Consensus       257 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~E  336 (505)
                      +++....+.   .....|+++.+++...++  +..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|
T Consensus       253 ~~~~~~~~~---~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E  327 (490)
T PLN02302        253 RRNSRKQNI---SPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAE  327 (490)
T ss_pred             HHHhhhccC---CCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            875532111   124579999999875432  235899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC----CCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCC
Q 010661          337 VRRVVKHK----SSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWN  412 (505)
Q Consensus       337 i~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~  412 (505)
                      +++++++.    ..++++++++||||+|||+|++|++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+
T Consensus       328 ~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~  406 (490)
T PLN02302        328 QEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYP  406 (490)
T ss_pred             HHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCC
Confidence            99998642    1378999999999999999999999999987 499999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeec
Q 010661          413 RAEEFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSK  492 (505)
Q Consensus       413 ~p~~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (505)
                      ||++|+||||++.+    ..+..++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.  .+  +....  +..|
T Consensus       407 dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~--~~~~~--~~~p  476 (490)
T PLN02302        407 NPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG--CK--VMYLP--HPRP  476 (490)
T ss_pred             CccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC--Cc--ceeCC--CCCC
Confidence            99999999999753    235689999999999999999999999999999999999987542  12  22222  2456


Q ss_pred             CCCeeEeeccC
Q 010661          493 KFPLILVPTLY  503 (505)
Q Consensus       493 ~~~~~~~~~~r  503 (505)
                      +.++.+++++|
T Consensus       477 ~~~~~~~~~~~  487 (490)
T PLN02302        477 KDNCLARITKV  487 (490)
T ss_pred             CCCceEEEEec
Confidence            67777777765


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.8e-71  Score=490.31  Aligned_cols=443  Identities=22%  Similarity=0.349  Sum_probs=359.4

Q ss_pred             CCCCCCC-CCccccccccCCCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccchhc
Q 010661           30 NLPPSPP-RLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGDIIF  108 (505)
Q Consensus        30 ~~~pgp~-~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~  108 (505)
                      +.||--+ ++|++|+...|+++|.++++++++|||+||++.++|+.+.++.||+....++......++-...+... ...
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l-~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKL-TTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHh-hhh
Confidence            4566544 58999999999999999999999999999999999999999999999999998653222221111111 112


Q ss_pred             cCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHH-HHhhccCCCceeHHHHHHHHHHHHHHHHHh
Q 010661          109 YASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNK-IRSSCFNGGSVNLAEMLQTVANNIIARSVL  187 (505)
Q Consensus       109 ~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  187 (505)
                      ..|+++.....+....++.+++ ...+...+++++.+.+.+++.+.++. +.+   ++.+..+.++.+.+.+.+.-..+|
T Consensus       110 vFg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  110 VFGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             hcCCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhh
Confidence            2367777777778888888887 67788899999999999999998887 333   566777888888888888888888


Q ss_pred             cccchhcccCCchhHHHHHHHHHHHhhhcccccccccc-CccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 010661          188 GRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPS-LGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISDED  266 (505)
Q Consensus       188 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  266 (505)
                      |+....+     +++......++...+.  .+...||. +..     ...++..++++.+.+.+.+.+.++++..     
T Consensus       186 ~e~r~~~-----d~~~a~l~~dLd~~F~--~~d~~FP~~LP~-----~~~r~~~ra~~~i~k~f~~~i~~rr~s~-----  248 (486)
T KOG0684|consen  186 GEVRDQL-----DADVAKLYHDLDQGFQ--PFDFLFPYNLPI-----PLLRRRDRARKKISKIFSKIILDRRASI-----  248 (486)
T ss_pred             hhhhhhh-----cchHHHHHHHHhcccc--chHhhcccCCCc-----chhhhHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence            8876633     2223333333332221  23445673 222     3456666899999999999999988765     


Q ss_pred             CCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCCC
Q 010661          267 NDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKHKSS  346 (505)
Q Consensus       267 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~  346 (505)
                        .....|+++.+++.-.++.   +.+++|+....+.++|||+.||+.+.+|++++|++|||+++.+++|+++++|.+..
T Consensus       249 --s~~~~dmlq~l~~~y~dg~---~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~  323 (486)
T KOG0684|consen  249 --SKWDNDMLQSLMEKYKDGR---PTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKE  323 (486)
T ss_pred             --ccccHHHHHHHHHHhhcCC---cCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCC
Confidence              3445799999998444443   79999999999999999999999999999999999999999999999999998765


Q ss_pred             -CChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccC----eeeCCCCEEEecchhhccCCCCCCCCCCCCCCc
Q 010661          347 -INVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRG----YDIPANTTTYINAWAIQRDPKVWNRAEEFLPDR  421 (505)
Q Consensus       347 -~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR  421 (505)
                       +++++|++||.|++||+|||||+||.+..+ |.+.+|+++.+    |.||+|..|.++++.+|+||++||||+.|+|+|
T Consensus       324 ~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dR  402 (486)
T KOG0684|consen  324 KLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDR  402 (486)
T ss_pred             CCCHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhh
Confidence             999999999999999999999999999887 99999999965    999999999999999999999999999999999


Q ss_pred             cccCCCCC-C-CC--cccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCee
Q 010661          422 FIDSTIDF-N-GQ--NFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLI  497 (505)
Q Consensus       422 ~~~~~~~~-~-~~--~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (505)
                      |++++.+. + +.  .+.|||||+|.|.|||+.||.+|+|+++..+|++||++++++ +.++++++..   ++.|..+++
T Consensus       403 f~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~---v~~P~g~v~  478 (486)
T KOG0684|consen  403 FLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSRM---VMQPEGDVR  478 (486)
T ss_pred             ccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHHh---hcCCCCCce
Confidence            99765433 1 22  345699999999999999999999999999999999999997 3455556544   778999999


Q ss_pred             EeeccCC
Q 010661          498 LVPTLYL  504 (505)
Q Consensus       498 ~~~~~r~  504 (505)
                      |+.+.|-
T Consensus       479 irYK~R~  485 (486)
T KOG0684|consen  479 IRYKRRP  485 (486)
T ss_pred             EEEeecC
Confidence            9999884


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=9e-71  Score=531.96  Aligned_cols=437  Identities=20%  Similarity=0.304  Sum_probs=336.0

Q ss_pred             CCCCCCCCCCCCCCCccccccccCC-----CCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCC
Q 010661           24 RNKNKLNLPPSPPRLPIIGNLHQLG-----TLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANR   98 (505)
Q Consensus        24 ~~~~~~~~~pgp~~~p~lG~~~~~~-----~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~   98 (505)
                      ....+.+.||||.++|++||+..+.     .++..++.+++++||++++++++++++|+|+||+++++++.++...|..+
T Consensus        24 ~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~  103 (472)
T PLN02987         24 TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECS  103 (472)
T ss_pred             hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEec
Confidence            3345556799999999999998762     46888899999999999999999999999999999999999887777544


Q ss_pred             CCccccchhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHH
Q 010661           99 PKNTAGDIIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVA  178 (505)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  178 (505)
                      ........  .++.++.+ .+|+.|+++|+++ .++++...++.+.   .+++.++++...+..  .+++++.+.+.+++
T Consensus       104 ~~~~~~~~--lg~~~l~~-~~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~~t  174 (472)
T PLN02987        104 YPGSISNL--LGKHSLLL-MKGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKKIT  174 (472)
T ss_pred             CcHHHHHH--hCcccccc-cCcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHHHH
Confidence            32111111  12234444 4699999999996 5555555554433   122333333222211  14699999999999


Q ss_pred             HHHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010661          179 NNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHR  258 (505)
Q Consensus       179 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  258 (505)
                      ++++++++||.+...     ..+.+.+.........    ....+|++      ....++..++.+++.+++.+.+++++
T Consensus       175 ~~vi~~~~fg~~~~~-----~~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        175 FELTVKQLMSFDPGE-----WTESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHHHHHcCCCChH-----HHHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987642     1222222222211111    11223432      13456677888999999999999987


Q ss_pred             hccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHH
Q 010661          259 KSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVR  338 (505)
Q Consensus       259 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  338 (505)
                      +....+    ....+|+++.+++..      ..+++++++++++.+++||+|||+.+++|++++|++||++|+++++|++
T Consensus       240 ~~~~~~----~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~  309 (472)
T PLN02987        240 KEEEEG----AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHE  309 (472)
T ss_pred             hhhhcc----CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence            653211    123579999999753      1589999999999999999999999999999999999999999999999


Q ss_pred             HHhc---CCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCC
Q 010661          339 RVVK---HKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAE  415 (505)
Q Consensus       339 ~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  415 (505)
                      ++.+   +...++++++.+|||++||++|+||++|+++.. +|++.+|++++||.||+|+.|+++.+++|+||++|+||+
T Consensus       310 ~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~  388 (472)
T PLN02987        310 KIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDAR  388 (472)
T ss_pred             HHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCcc
Confidence            9875   234588999999999999999999999999866 599999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCC
Q 010661          416 EFLPDRFIDSTIDFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFP  495 (505)
Q Consensus       416 ~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (505)
                      +|+||||+++... ...+..++|||+|+|.|||++||++|++++++.|+++|+|+++++.+   +    ....+..|..+
T Consensus       389 ~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~----~~~~~~~p~~~  460 (472)
T PLN02987        389 TFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK---L----VFFPTTRTQKR  460 (472)
T ss_pred             ccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc---e----eecccccCCCC
Confidence            9999999975322 12346899999999999999999999999999999999999876532   1    11336677778


Q ss_pred             eeEeeccC
Q 010661          496 LILVPTLY  503 (505)
Q Consensus       496 ~~~~~~~r  503 (505)
                      +.+++++|
T Consensus       461 ~~~~~~~r  468 (472)
T PLN02987        461 YPINVKRR  468 (472)
T ss_pred             ceEEEEec
Confidence            88888876


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.1e-70  Score=534.87  Aligned_cols=453  Identities=23%  Similarity=0.370  Sum_probs=350.6

Q ss_pred             CCCCCCCCccccccccC-----CCCchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccc
Q 010661           31 LPPSPPRLPIIGNLHQL-----GTLRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGD  105 (505)
Q Consensus        31 ~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~  105 (505)
                      .-.|-.+||++|+.+.+     .+.++..+.+++++|||++++++|+.+.++++||+++++|+.+.+..|.++.......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34677899999998877     4678899999999999999999999999999999999999987666676554322211


Q ss_pred             hhccCCcceEeccCChhHHHHHHHHhcccCcHHHHHHhHh-hHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHH
Q 010661          106 IIFYASKDIGFSNYGEYWREGRKACVLGLLSNKKVQSLQY-VNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIAR  184 (505)
Q Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  184 (505)
                      ..  .+.++ +..+|+.|+++|+.+ .+.|+..+++.+.+ ++.++++.+++.+.+...+++++|+.++++.+++++++.
T Consensus        93 ~~--~~~~i-~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 FL--FGSGF-AIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             HH--hcCcc-ccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            11  23444 445699999999997 78888888888754 788999999999987655567899999999999999999


Q ss_pred             HHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCcc--chhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 010661          185 SVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGW--LDVVTGRIGRLKATAREFDALFDQVIEEHRKSEI  262 (505)
Q Consensus       185 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (505)
                      ++||.+++....   ..++.+.+......... .....+|++.+  +..+.+..++..++.+.+.+++.+.++++++...
T Consensus       169 ~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~  244 (489)
T PLN02936        169 SVFNYNFDSLTT---DSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVE  244 (489)
T ss_pred             HHcCCCcccccc---CcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999975421   12333333332222111 11123333211  1111123445667778888888888887765422


Q ss_pred             cCCC----C--CCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHH
Q 010661          263 SDED----N--DQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEE  336 (505)
Q Consensus       263 ~~~~----~--~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~E  336 (505)
                      ....    .  ......|+++.|++...      .++.+++.++++.+++||+|||+.+++|++++|++||++|+|+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~E  318 (489)
T PLN02936        245 AEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEE  318 (489)
T ss_pred             hcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            1100    0  01234689999986531      4889999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCChhhccCChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCC
Q 010661          337 VRRVVKHKSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEE  416 (505)
Q Consensus       337 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  416 (505)
                      ++++++. ..++++++++||||+|||+||||++|+++...+|.+..|+.++|+.||+|+.|.++.+++||||++||||++
T Consensus       319 i~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~  397 (489)
T PLN02936        319 LDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEE  397 (489)
T ss_pred             HHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccc
Confidence            9999885 458999999999999999999999999999887776778888999999999999999999999999999999


Q ss_pred             CCCCccccCCCC--CCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCC
Q 010661          417 FLPDRFIDSTID--FNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKF  494 (505)
Q Consensus       417 f~PeR~~~~~~~--~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (505)
                      |+||||++++..  ....+..|+|||+|+|.|||++||++|++++|++|+++|+|+++++.   ++.  ...+.+..++.
T Consensus       398 F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~--~~~~~~~~~~~  472 (489)
T PLN02936        398 FVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIV--MTTGATIHTTN  472 (489)
T ss_pred             cCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccc--eecceEEeeCC
Confidence            999999964321  12234589999999999999999999999999999999999987653   221  22345555666


Q ss_pred             CeeEeeccC
Q 010661          495 PLILVPTLY  503 (505)
Q Consensus       495 ~~~~~~~~r  503 (505)
                      +++++.++|
T Consensus       473 ~~~v~~~~R  481 (489)
T PLN02936        473 GLYMTVSRR  481 (489)
T ss_pred             CeEEEEEee
Confidence            777777665


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-68  Score=521.27  Aligned_cols=442  Identities=18%  Similarity=0.222  Sum_probs=339.1

Q ss_pred             CccccccccCCCCchHHHHHHHHhcC-CeEEEEecCcceEEEcCHHHHHHHHHhcCccccCCCCccccchhccCCcceEe
Q 010661           38 LPIIGNLHQLGTLRHRSLKALSNKYG-PLMFLHLGHSPTLVVSSAEITREIIKNHDIVFANRPKNTAGDIIFYASKDIGF  116 (505)
Q Consensus        38 ~p~lG~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (505)
                      .++.|+......+..+++..+.++++ .+++++..+.  ++++||+.+++|+..+...|.+........ ....|.++ +
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~-~~~~g~gi-~  124 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAIL-GDLLGRGI-F  124 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHH-HHhcCCce-e
Confidence            55788876654566778878888887 5788776554  899999999999987765565433221111 11224554 5


Q ss_pred             ccCChhHHHHHHHHhcccCcHHHHHHhH--hhHHHHHHHHHHHHHhhcc--CCCceeHHHHHHHHHHHHHHHHHhcccch
Q 010661          117 SNYGEYWREGRKACVLGLLSNKKVQSLQ--YVNEEEVAIMTNKIRSSCF--NGGSVNLAEMLQTVANNIIARSVLGRRVE  192 (505)
Q Consensus       117 ~~~g~~w~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~~i~~~~fG~~~~  192 (505)
                      +.+|+.|+++||.+ .+.|+...++.+.  +++.+.++.+++.+.+..+  .++++|+.++++.+++|+++.++||.+++
T Consensus       125 ~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        125 NVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             ecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            56699999999997 7889988888764  6777888888888875432  24679999999999999999999999987


Q ss_pred             hcccCCchhHHHHHHHHHHHhhhccccccccccCccc-hhh-hhhhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCCC
Q 010661          193 EETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWL-DVV-TGRIGRLKATAREFDALFDQVIEEHRKSEISDEDNDQS  270 (505)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  270 (505)
                      .++.+....++.+....+...... .....+|++.++ ..+ .+..++..++.+.+.+++.+.|+++++..       ..
T Consensus       204 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-------~~  275 (502)
T PLN02426        204 CLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG-------FS  275 (502)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc-------cC
Confidence            654322234455554443322111 011111221111 011 12345677788889999999999887642       12


Q ss_pred             ccchHHHHHHhhcccCCcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCC-CCCCh
Q 010661          271 DEKDLVHTILKLQKDGRLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKHK-SSINV  349 (505)
Q Consensus       271 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~~~  349 (505)
                      ...|+++.+++..        .+++++.+++.++++||+|||+.+++|++|+|++||++|+|+++|++++++.+ ..+++
T Consensus       276 ~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~  347 (502)
T PLN02426        276 ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASF  347 (502)
T ss_pred             CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCH
Confidence            3579999999752        36789999999999999999999999999999999999999999999998753 36899


Q ss_pred             hhccCChhHHHHHHHhcCCCCCCcccccccccccccc-cCeeeCCCCEEEecchhhccCCCCC-CCCCCCCCCccccCCC
Q 010661          350 DDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNL-RGYDIPANTTTYINAWAIQRDPKVW-NRAEEFLPDRFIDSTI  427 (505)
Q Consensus       350 ~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~PeR~~~~~~  427 (505)
                      +++++||||+|||+|+||++|+++... |.+.+|.++ +|+.||+||.|.++.+++||||++| |||++|+||||++++.
T Consensus       348 ~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        348 EEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            999999999999999999999999885 999998887 9999999999999999999999999 9999999999997432


Q ss_pred             CCCCCcccccccCCCCCCCCchhHHHHHHHHHHHHhHHhheeecCCCCCCCCCCcccccCeeeecCCCeeEeeccCC
Q 010661          428 DFNGQNFEFIPFGAGRRICPGMLFGKVAAEYLLANLLYWFDWKLPGGAVNEDLDMTEVFGLTVSKKFPLILVPTLYL  504 (505)
Q Consensus       428 ~~~~~~~~~~pFg~G~~~C~G~~~a~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  504 (505)
                      ....++..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++.. +.  .....+++..++.++++++++|.
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~--~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-RA--PRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-CC--CcccceeEEecCCCEEEEEEEcc
Confidence            1122456899999999999999999999999999999999999864421 11  12234577888888999998774


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.4e-61  Score=459.32  Aligned_cols=401  Identities=16%  Similarity=0.231  Sum_probs=296.7

Q ss_pred             CCCCCCCCCCCCccccccccC-----CCCchHHHHHHHHhcCC-eEEEEecCcce-------EEEcCHHHHHHHHHh---
Q 010661           27 NKLNLPPSPPRLPIIGNLHQL-----GTLRHRSLKALSNKYGP-LMFLHLGHSPT-------LVVSSAEITREIIKN---   90 (505)
Q Consensus        27 ~~~~~~pgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~-v~~i~~~~~~~-------vvv~dp~~i~~i~~~---   90 (505)
                      .+.+.|||+.++|++|++.++     ..++..++.+.++|||+ ||+++++|.|.       |+++||++++.||.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            355669999999999999865     45668999999999999 99999999766       999999999999974   


Q ss_pred             -cCccccCCCCccccchhccCCcc---eEeccCChhHHHHHHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCC
Q 010661           91 -HDIVFANRPKNTAGDIIFYASKD---IGFSNYGEYWREGRKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGG  166 (505)
Q Consensus        91 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  166 (505)
                       +...+..... ....   ..|.+   .++..+|+.|+++|+++ .+.|+ ..++.+.+.+.+.+++++++|......++
T Consensus        94 ~~~~~~~~~~~-~~~~---l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         94 DKRDVFTGTYM-PSTA---FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccceeeec-cCcc---ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence             3333332211 1111   22444   56667799999999998 77888 57788999999999999999965423455


Q ss_pred             ceeHHHHHHHHHHHHHHHHHhcccchhcccCCchhHHHHHHHHHHHhhhccccccccccCccchhhhhhhhh--------
Q 010661          167 SVNLAEMLQTVANNIIARSVLGRRVEEETAGGNSNKFGELSRRMMIQSASFCYRDLFPSLGWLDVVTGRIGR--------  238 (505)
Q Consensus       167 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~--------  238 (505)
                      ++|+.+.++.++++++++++||.+.+..   ...+.+..........       ..+|.....  ++...++        
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~---~l~~~~~~~~~~~~~~-------~~~p~~~~~--l~~~~~~~i~~~~~~  235 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSET---ALGSDGPALIQKWLAL-------QLAPLASTG--LPHVLEELLLHTFPL  235 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchh---hhccchhHHHHHHHHH-------HhhHHHHcC--chHHHHHHhhcccCC
Confidence            7999999999999999999999876520   0112222222221110       000100000  0000000        


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHHhccccCCCCCCCccchHHHHHHhhcccCCcCccCCHHHHHHHHHH-HHhccccchH
Q 010661          239 ----LKATAREFDALFDQVIEEHRKSEISDEDNDQSDEKDLVHTILKLQKDGRLGIELNQDNLKALLLD-MFSGGTETTS  313 (505)
Q Consensus       239 ----~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~Ag~~tt~  313 (505)
                          ..+..+++.+++.                      +.++.++....+.    .++++|+.++++. +.+++++|++
T Consensus       236 ~~~~~~~~~~~~~~~~~----------------------~~~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~  289 (480)
T PLN02648        236 PFFLVKSDYDKLYDFFR----------------------ASATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFK  289 (480)
T ss_pred             chhhhhccHHHHHHHHH----------------------HHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHH
Confidence                0001111111111                      1122444333221    4999999999875 4567788888


Q ss_pred             HHHHHHHHHHhhCch-hHHHHHHHHHHHhcC-CCCCChhhccCChhHHHHHHHhcCCCCCCccccccccccccccc----
Q 010661          314 ATVEWAMAELVKNPK-LMKKTQEEVRRVVKH-KSSINVDDINQMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLR----  387 (505)
Q Consensus       314 ~~l~~~l~~L~~~p~-~q~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~----  387 (505)
                      .+++|++|+|++||+ +|+|+++|++.+++. ++.++++++++||||++||+|+||++|+++... |++.+|++++    
T Consensus       290 ~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~  368 (480)
T PLN02648        290 IFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDA  368 (480)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCc
Confidence            899999999999995 999999999999863 456899999999999999999999999999986 8899999995    


Q ss_pred             CeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccCCCCCCCCccccccc---------CCCCCCCCchhHHHHHHHH
Q 010661          388 GYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRFIDSTIDFNGQNFEFIPF---------GAGRRICPGMLFGKVAAEY  458 (505)
Q Consensus       388 g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~~~~~~~~~~~~~~~pF---------g~G~~~C~G~~~a~~e~~~  458 (505)
                      ||.||||+.|+++.+.+||||++|+||++|||+||++++..   ....+++|         |+|+|.|+|++||++|+++
T Consensus       369 g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~  445 (480)
T PLN02648        369 AFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARL  445 (480)
T ss_pred             eEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHH
Confidence            79999999999999999999999999999999999864321   11234444         6778999999999999999


Q ss_pred             HHHHhHHhhe-eecCCCC
Q 010661          459 LLANLLYWFD-WKLPGGA  475 (505)
Q Consensus       459 ~l~~ll~~~~-~~~~~~~  475 (505)
                      ++++|+++|+ |++.+++
T Consensus       446 ~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        446 FVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHHHhCEEeecCCc
Confidence            9999999998 9987664


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=8.3e-56  Score=419.59  Aligned_cols=360  Identities=26%  Similarity=0.404  Sum_probs=295.8

Q ss_pred             chHHHHHHHHhcCCeEEEEecCcc--eEEEcCHHHHHHHHHhcCccccCCCCccccc--hhccCCcceEeccCChhHHHH
Q 010661           51 RHRSLKALSNKYGPLMFLHLGHSP--TLVVSSAEITREIIKNHDIVFANRPKNTAGD--IIFYASKDIGFSNYGEYWREG  126 (505)
Q Consensus        51 ~~~~~~~~~~~yG~v~~i~~~~~~--~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  126 (505)
                      +......+.+.||.++.+...+.-  .+++++++.++++++++. .+++........  .....+...+...+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455566788899988888766654  799999999999999764 122222111111  112224444666779999999


Q ss_pred             HHHHhcccCcHHHHHHhHhhHHHHHHHHHHHHHhhccCCCceeHHHHHHHHHHHHHHHHHhcccchhcccCCchhHHHHH
Q 010661          127 RKACVLGLLSNKKVQSLQYVNEEEVAIMTNKIRSSCFNGGSVNLAEMLQTVANNIIARSVLGRRVEEETAGGNSNKFGEL  206 (505)
Q Consensus       127 R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  206 (505)
                      ||.+ .+.|+++.++.+.+.+.+.++++++.+ ..   ++..++.+.+..++.++++ .+||.+.+.      ...+...
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~---~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~------~~~~~~~  170 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQ---GGADLVLDFAAELTLRVIA-ELLGVPLED------RPQLLRW  170 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-cc---CCchhHHHHhhhhhHHHHH-HHhCCCHHH------HHHHHHH
Confidence            9997 899999999999999999999999998 32   2788999999999999999 999998863      2223332


Q ss_pred             HHHHHHhhhccccccccccCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCccchHHHHHHhhcccC
Q 010661          207 SRRMMIQSASFCYRDLFPSLGWLDVVTGRIGRLKATAREFDALFDQVIEEHRKSEISDEDNDQSDEKDLVHTILKLQKDG  286 (505)
Q Consensus       207 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  286 (505)
                      ........        .|...    ......+..++...+.+++.++|++++.          ...+|+++.|+.+..++
T Consensus       171 ~~~~~~~~--------~~~~~----~~~~~~~~~~a~~~~~~~~~~li~~rR~----------~~~~dlls~l~~a~~~~  228 (411)
T COG2124         171 SDALLLRL--------DPDLG----PEEPWRRARAARRELDAYLRALIAERRA----------APRDDLLSLLLSAEDDG  228 (411)
T ss_pred             HHHHHhcc--------CcccC----CcccHHHHHHHHHHHHHHHHHHHHHhcc----------CCcccHHHHHHHHhhCC
Confidence            22222110        01111    1134567888999999999999999983          44689999999987765


Q ss_pred             CcCccCCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhcCCCCCChhhccCChhHHHHHHHhc
Q 010661          287 RLGIELNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVKHKSSINVDDINQMNYLKCVIKETL  366 (505)
Q Consensus       287 ~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  366 (505)
                      +  ..+|++||.++++++++||+|||+++++|++|.|++||++++++++|.+.                ||++++++|+|
T Consensus       229 ~--~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~L  290 (411)
T COG2124         229 G--GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETL  290 (411)
T ss_pred             C--CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHH
Confidence            3  25999999999999999999999999999999999999999999998764                89999999999


Q ss_pred             CCCCCCcccccccccccccccCeeeCCCCEEEecchhhccCCCCCCCCCCCCCCccccCCCCCCCCcccccccCCCCCCC
Q 010661          367 RLHPAGTILFPRMTSTSVNLRGYDIPANTTTYINAWAIQRDPKVWNRAEEFLPDRFIDSTIDFNGQNFEFIPFGAGRRIC  446 (505)
Q Consensus       367 Rl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~PeR~~~~~~~~~~~~~~~~pFg~G~~~C  446 (505)
                      |++||++. .+|.+.+|++++|+.||+|+.|.+++++.||||++|++|++|||+||.          ..|+|||+|+|.|
T Consensus       291 R~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~C  359 (411)
T COG2124         291 RLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRC  359 (411)
T ss_pred             HhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccc
Confidence            99999999 679999999999999999999999999999999999999999999995          4799999999999


Q ss_pred             CchhHHHHHHHHHHHHhHHhheeecCCC
Q 010661          447 PGMLFGKVAAEYLLANLLYWFDWKLPGG  474 (505)
Q Consensus       447 ~G~~~a~~e~~~~l~~ll~~~~~~~~~~  474 (505)
                      +|.+||++|++++++.|+++|++....+
T Consensus       360 lG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         360 LGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             cCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            9999999999999999999999987665


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=56.24  E-value=3.1  Score=35.02  Aligned_cols=44  Identities=18%  Similarity=0.234  Sum_probs=32.7

Q ss_pred             CChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEEe
Q 010661          354 QMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTYI  399 (505)
Q Consensus       354 ~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~~  399 (505)
                      .-..+.|||.|+.-+..-.-.-  =+..+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            4456788999998776664443  3346789999999999997654


No 34 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=49.67  E-value=85  Score=21.74  Aligned_cols=22  Identities=9%  Similarity=0.220  Sum_probs=11.0

Q ss_pred             hHHHHHHHHHHHHHHHhhccCC
Q 010661            4 SVLLFLLLLFPFLFLRLKHSRN   25 (505)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (505)
                      ++++++++.++|+++...+++.
T Consensus         6 a~~~~V~V~IVclliya~YRR~   27 (92)
T PHA02681          6 ALLTVIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            4445555555555555444444


No 35 
>PRK06789 flagellar motor switch protein; Validated
Probab=48.51  E-value=19  Score=24.68  Aligned_cols=40  Identities=18%  Similarity=0.181  Sum_probs=33.0

Q ss_pred             HHHHhcCCCCCCccccccccccccc--ccCeeeCCCCEEEec
Q 010661          361 VIKETLRLHPAGTILFPRMTSTSVN--LRGYDIPANTTTYIN  400 (505)
Q Consensus       361 ~i~E~lRl~p~~~~~~~R~~~~d~~--i~g~~ip~g~~v~~~  400 (505)
                      -++|.+.+.+....-+.|.+..++.  ++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3788999999988888788877544  599999999998875


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=45.05  E-value=57  Score=20.19  Aligned_cols=42  Identities=14%  Similarity=0.264  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHH
Q 010661          296 NLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEV  337 (505)
Q Consensus       296 ~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei  337 (505)
                      ++..++..++-.|-|..+..++--+...--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666777777777777777777777888887777665


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=43.93  E-value=7.9  Score=24.80  Aligned_cols=25  Identities=24%  Similarity=0.376  Sum_probs=19.5

Q ss_pred             HHHHHHhhCchhHHHHHHHHHHHhc
Q 010661          318 WAMAELVKNPKLMKKTQEEVRRVVK  342 (505)
Q Consensus       318 ~~l~~L~~~p~~q~~l~~Ei~~~~~  342 (505)
                      -++.+|.+||++.+++.+.-.+++|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999985555444


No 38 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=43.79  E-value=19  Score=27.60  Aligned_cols=16  Identities=6%  Similarity=0.214  Sum_probs=6.3

Q ss_pred             HHHHHHHHHHHhhccC
Q 010661            9 LLLLFPFLFLRLKHSR   24 (505)
Q Consensus         9 ~~~~~~~~~~~~~~~~   24 (505)
                      ++++++++++++++++
T Consensus        77 vIg~Illi~y~irR~~   92 (122)
T PF01102_consen   77 VIGIILLISYCIRRLR   92 (122)
T ss_dssp             HHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            3333333344444333


No 39 
>PF15102 TMEM154:  TMEM154 protein family
Probab=38.87  E-value=28  Score=27.43  Aligned_cols=27  Identities=19%  Similarity=0.200  Sum_probs=14.7

Q ss_pred             hhHHHHHHHHHHHHHHHhhccCCCCCC
Q 010661            3 QSVLLFLLLLFPFLFLRLKHSRNKNKL   29 (505)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   29 (505)
                      ..+.+++++++++.++.+....++++.
T Consensus        61 IlIP~VLLvlLLl~vV~lv~~~kRkr~   87 (146)
T PF15102_consen   61 ILIPLVLLVLLLLSVVCLVIYYKRKRT   87 (146)
T ss_pred             EeHHHHHHHHHHHHHHHheeEEeeccc
Confidence            445556666777766555544443433


No 40 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=38.86  E-value=1.4e+02  Score=21.20  Aligned_cols=51  Identities=16%  Similarity=0.117  Sum_probs=42.0

Q ss_pred             CCHHHHHHHHHHHHhccccchHHHHHHHHHHHhhCchhHHHHHHHHHHHhc
Q 010661          292 LNQDNLKALLLDMFSGGTETTSATVEWAMAELVKNPKLMKKTQEEVRRVVK  342 (505)
Q Consensus       292 l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  342 (505)
                      -..+.........++-=+..++......+.+-++||+..+++.+.+..-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            344555666677888889999999999999999999999999998887654


No 41 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=38.57  E-value=15  Score=23.10  Aligned_cols=10  Identities=50%  Similarity=1.039  Sum_probs=8.7

Q ss_pred             cccCCCCCCC
Q 010661          437 IPFGAGRRIC  446 (505)
Q Consensus       437 ~pFg~G~~~C  446 (505)
                      .+||-|+|.|
T Consensus        12 ~kfg~GsrsC   21 (56)
T KOG3506|consen   12 RKFGQGSRSC   21 (56)
T ss_pred             cccCCCCcce
Confidence            3699999998


No 42 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=37.34  E-value=78  Score=22.08  Aligned_cols=17  Identities=24%  Similarity=0.501  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHhhccCC
Q 010661            9 LLLLFPFLFLRLKHSRN   25 (505)
Q Consensus         9 ~~~~~~~~~~~~~~~~~   25 (505)
                      +++++++++.++...+.
T Consensus        33 vLVIIiLlImlfqsSS~   49 (85)
T PF10717_consen   33 VLVIIILLIMLFQSSSN   49 (85)
T ss_pred             HHHHHHHHHHHHhccCC
Confidence            33344444444444443


No 43 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=36.61  E-value=29  Score=26.87  Aligned_cols=22  Identities=18%  Similarity=0.395  Sum_probs=16.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhHH
Q 010661          444 RICPGMLFGKVAAEYLLANLLY  465 (505)
Q Consensus       444 ~~C~G~~~a~~e~~~~l~~ll~  465 (505)
                      .+|.|++||+.++-.++.+|+.
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIt   39 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLIT   39 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHH
T ss_pred             ecccchHHHHHHHHHHHHHHhc
Confidence            5799999999999999999986


No 44 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=33.69  E-value=9  Score=36.24  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=32.6

Q ss_pred             CChhHHHHHHHhcCCCCCCcccccccccccccccCeeeCCCCEEE
Q 010661          354 QMNYLKCVIKETLRLHPAGTILFPRMTSTSVNLRGYDIPANTTTY  398 (505)
Q Consensus       354 ~lp~l~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~ip~g~~v~  398 (505)
                      .-..+.|||.|+.-+.-...+-  =+..+|+.++|..||+||.|.
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~  296 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLY  296 (410)
T ss_pred             CCCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEE
Confidence            4467789999998877664443  334678999999999999664


No 45 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=33.12  E-value=21  Score=27.86  Aligned_cols=12  Identities=0%  Similarity=0.071  Sum_probs=4.6

Q ss_pred             HHHHHHhhccCC
Q 010661           14 PFLFLRLKHSRN   25 (505)
Q Consensus        14 ~~~~~~~~~~~~   25 (505)
                      +++++.+....+
T Consensus        13 ~l~~~~~~~~~r   24 (130)
T PF12273_consen   13 LLFLFLFYCHNR   24 (130)
T ss_pred             HHHHHHHHHHHH
Confidence            333333334433


No 46 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=32.61  E-value=99  Score=23.14  Aligned_cols=11  Identities=36%  Similarity=0.398  Sum_probs=7.3

Q ss_pred             CCccccccccC
Q 010661           37 RLPIIGNLHQL   47 (505)
Q Consensus        37 ~~p~lG~~~~~   47 (505)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            47778886544


No 47 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=32.49  E-value=1.5e+02  Score=28.85  Aligned_cols=47  Identities=13%  Similarity=0.181  Sum_probs=23.6

Q ss_pred             CchHHHHHH-HHhcCCeEEEEecCcceEEEcCHHHHHHHHHhcCcccc
Q 010661           50 LRHRSLKAL-SNKYGPLMFLHLGHSPTLVVSSAEITREIIKNHDIVFA   96 (505)
Q Consensus        50 ~~~~~~~~~-~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~~~~~~   96 (505)
                      ++...++-. .-+||.|++-.+-++.+-|=.=|..-++=+.+....|+
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            344444333 33788888877776654333333333333444444443


No 48 
>PHA03162 hypothetical protein; Provisional
Probab=30.31  E-value=40  Score=25.83  Aligned_cols=26  Identities=19%  Similarity=0.225  Sum_probs=21.5

Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHhHH
Q 010661          440 GAGRRICPGMLFGKVAAEYLLANLLY  465 (505)
Q Consensus       440 g~G~~~C~G~~~a~~e~~~~l~~ll~  465 (505)
                      ++|++.|||+...+-|+-.=|++|=.
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLqm   27 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQL   27 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHHH
Confidence            57999999999999988877777643


No 49 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.55  E-value=1.2e+02  Score=17.63  Aligned_cols=13  Identities=8%  Similarity=0.383  Sum_probs=10.0

Q ss_pred             HhhCchhHHHHHH
Q 010661          323 LVKNPKLMKKTQE  335 (505)
Q Consensus       323 L~~~p~~q~~l~~  335 (505)
                      ..+||++++.++.
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            4489999888774


No 50 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=26.20  E-value=41  Score=21.86  Aligned_cols=8  Identities=25%  Similarity=0.700  Sum_probs=5.7

Q ss_pred             CCCccccC
Q 010661          418 LPDRFIDS  425 (505)
Q Consensus       418 ~PeR~~~~  425 (505)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            77788764


No 51 
>PHA03049 IMV membrane protein; Provisional
Probab=25.79  E-value=1.6e+02  Score=19.52  Aligned_cols=9  Identities=33%  Similarity=0.460  Sum_probs=3.5

Q ss_pred             CCCCCCCCC
Q 010661           28 KLNLPPSPP   36 (505)
Q Consensus        28 ~~~~~pgp~   36 (505)
                      ....+|.|.
T Consensus        29 ~q~~~p~~e   37 (68)
T PHA03049         29 TSQNPPSQE   37 (68)
T ss_pred             cCCCCCChh
Confidence            333444333


No 52 
>PRK05933 type III secretion system protein; Validated
Probab=25.56  E-value=65  Score=29.28  Aligned_cols=44  Identities=16%  Similarity=0.270  Sum_probs=35.7

Q ss_pred             hHHHHHHHhcCCCCCCcccccccc-cc--cccccCeeeCCCCEEEec
Q 010661          357 YLKCVIKETLRLHPAGTILFPRMT-ST--SVNLRGYDIPANTTTYIN  400 (505)
Q Consensus       357 ~l~a~i~E~lRl~p~~~~~~~R~~-~~--d~~i~g~~ip~g~~v~~~  400 (505)
                      ....-|+|.++|.+....-+.|.+ .+  |+.++|..|.+|..|+++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            456679999999999888876664 34  566799999999999885


No 53 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=24.02  E-value=71  Score=17.63  Aligned_cols=16  Identities=25%  Similarity=0.758  Sum_probs=13.3

Q ss_pred             CcccccccCCCCCCCC
Q 010661          432 QNFEFIPFGAGRRICP  447 (505)
Q Consensus       432 ~~~~~~pFg~G~~~C~  447 (505)
                      .+..|+|+.|..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4568999999999994


No 54 
>PF10777 YlaC:  Inner membrane protein YlaC;  InterPro: IPR019713  The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis []. 
Probab=23.40  E-value=50  Score=26.05  Aligned_cols=38  Identities=16%  Similarity=0.485  Sum_probs=29.9

Q ss_pred             HHHHHhhCchhHHHHHHHHHHHhcCCCCCChhhccCCh
Q 010661          319 AMAELVKNPKLMKKTQEEVRRVVKHKSSINVDDINQMN  356 (505)
Q Consensus       319 ~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp  356 (505)
                      ++-.|+++|.+-+.+.++++..+..++.+++-|.-.|.
T Consensus       114 ai~~iL~~p~V~~~~K~~i~~i~~~Kgei~FYDVy~la  151 (155)
T PF10777_consen  114 AIDKILQSPQVPDEIKQGIQRIISTKGEISFYDVYSLA  151 (155)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHhCCceeEEEeEEee
Confidence            44567889999999999999999888877766654443


No 55 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=23.12  E-value=2e+02  Score=17.91  Aligned_cols=36  Identities=19%  Similarity=0.247  Sum_probs=25.5

Q ss_pred             HHHHHHhcCCeEEEEecCc----ceEEEcCHHHHHHHHHh
Q 010661           55 LKALSNKYGPLMFLHLGHS----PTLVVSSAEITREIIKN   90 (505)
Q Consensus        55 ~~~~~~~yG~v~~i~~~~~----~~vvv~dp~~i~~i~~~   90 (505)
                      +.++..+||+|-.+.+...    -+|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            3567889999988876543    36666899988888763


No 56 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=23.07  E-value=1.2e+02  Score=21.50  Aligned_cols=6  Identities=50%  Similarity=0.960  Sum_probs=3.8

Q ss_pred             CCcccc
Q 010661           37 RLPIIG   42 (505)
Q Consensus        37 ~~p~lG   42 (505)
                      +-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            456676


No 57 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=22.99  E-value=79  Score=18.84  Aligned_cols=19  Identities=5%  Similarity=0.232  Sum_probs=15.2

Q ss_pred             HHHHHHHhhCchhHHHHHH
Q 010661          317 EWAMAELVKNPKLMKKTQE  335 (505)
Q Consensus       317 ~~~l~~L~~~p~~q~~l~~  335 (505)
                      .|-++.++++||+|.-+.=
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4677888999999987753


No 58 
>PF12606 RELT:  Tumour necrosis factor receptor superfamily member 19;  InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis).  RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=22.39  E-value=2.1e+02  Score=17.93  Aligned_cols=25  Identities=20%  Similarity=0.106  Sum_probs=10.8

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCC
Q 010661            7 LFLLLLFPFLFLRLKHSRNKNKLNL   31 (505)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~   31 (505)
                      +++.++.++++......-++.....
T Consensus        11 iv~~lLg~~I~~~~K~ygYkht~d~   35 (50)
T PF12606_consen   11 IVMGLLGLSICTTLKAYGYKHTVDP   35 (50)
T ss_pred             HHHHHHHHHHHHHhhccccccccCC
Confidence            3334444444444444444444333


No 59 
>PF15206 FAM209:  FAM209 family
Probab=22.22  E-value=83  Score=24.46  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=18.5

Q ss_pred             HHHHHHHHHHHHHHhhc-cCCCCCCCCCCCCCCCccc
Q 010661            6 LLFLLLLFPFLFLRLKH-SRNKNKLNLPPSPPRLPII   41 (505)
Q Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~pgp~~~p~l   41 (505)
                      +++++.++++++++..+ ....++...|||-.++++-
T Consensus        41 wlWL~Fvv~lyvilKf~g~~~K~keq~p~glrg~~fr   77 (150)
T PF15206_consen   41 WLWLLFVVVLYVILKFRGDSEKNKEQSPPGLRGCSFR   77 (150)
T ss_pred             HHHHHHHHHHHheeEeccCcccccccCCCccCcccCC
Confidence            34444444444433333 3344556668887776654


No 60 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.14  E-value=1.9e+02  Score=22.37  Aligned_cols=40  Identities=15%  Similarity=0.286  Sum_probs=29.9

Q ss_pred             CchHHHHHHHHhcCCeEEEEecCcceEEEcCHHHHHHHHHhc
Q 010661           50 LRHRSLKALSNKYGPLMFLHLGHSPTLVVSSAEITREIIKNH   91 (505)
Q Consensus        50 ~~~~~~~~~~~~yG~v~~i~~~~~~~vvv~dp~~i~~i~~~~   91 (505)
                      +-...+.+|.++||.+--.  .+...+...|++..+++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            3456789999999976442  246677889999999998754


No 61 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=21.90  E-value=2.6e+02  Score=19.66  Aligned_cols=38  Identities=13%  Similarity=0.183  Sum_probs=28.6

Q ss_pred             HHHHHHHHhcCCe---EEEEecCcceEEEcCH-----HHHHHHHHh
Q 010661           53 RSLKALSNKYGPL---MFLHLGHSPTLVVSSA-----EITREIIKN   90 (505)
Q Consensus        53 ~~~~~~~~~yG~v---~~i~~~~~~~vvv~dp-----~~i~~i~~~   90 (505)
                      +..+++.++|.++   +++..++.+-+.|++.     +.+.+++..
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            5567888999987   8999998888887544     666666653


No 62 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.87  E-value=1.6e+02  Score=19.72  Aligned_cols=25  Identities=4%  Similarity=0.149  Sum_probs=19.9

Q ss_pred             HHHHHHHHHHHhhCchhHHHHHHHH
Q 010661          313 SATVEWAMAELVKNPKLMKKTQEEV  337 (505)
Q Consensus       313 ~~~l~~~l~~L~~~p~~q~~l~~Ei  337 (505)
                      +...+..+--++++||.+.+++.-+
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4456677888999999999998743


No 63 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=20.78  E-value=3.6e+02  Score=20.05  Aligned_cols=59  Identities=22%  Similarity=0.358  Sum_probs=39.1

Q ss_pred             CCCCCCCCCCccccccccCCCCchHHHHHHHHhcCCeEEEEec------CcceEEEcCHHHHHHHHH
Q 010661           29 LNLPPSPPRLPIIGNLHQLGTLRHRSLKALSNKYGPLMFLHLG------HSPTLVVSSAEITREIIK   89 (505)
Q Consensus        29 ~~~~pgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~v~~i~~~------~~~~vvv~dp~~i~~i~~   89 (505)
                      .+.||--..+-++.|+..  +--.+.+-++.-+||+|..|.+|      |.-+||-.|-..++....
T Consensus        11 ~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~d   75 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACD   75 (124)
T ss_pred             CCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHH
Confidence            344554445555555431  22345566888899999999988      555788888777777665


No 64 
>TIGR01260 ATP_synt_c ATP synthase, F0 subunit c. This model describes the subunit c in F1/F0-ATP synthase, a membrane associated multisubunit complex found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The functional role of subunit c, which is the part of F0 cluster, has been delineated in-vitro reconstitution experiments. Overall experimental proof exists that demonstrate the electrochemical gradient is converted into a rotational torque that leads to ATP synthesis.
Probab=20.11  E-value=1.3e+02  Score=19.47  Aligned_cols=23  Identities=9%  Similarity=0.032  Sum_probs=18.4

Q ss_pred             HHHHHHHHHHhhCchhHHHHHHH
Q 010661          314 ATVEWAMAELVKNPKLMKKTQEE  336 (505)
Q Consensus       314 ~~l~~~l~~L~~~p~~q~~l~~E  336 (505)
                      ...+..+--+++|||...+++.-
T Consensus        11 ~i~~~a~~~iaRqPe~~~~l~~~   33 (58)
T TIGR01260        11 ILGGKFLESAARQPELKPLLRTT   33 (58)
T ss_pred             HHHHHHHHHHHcChhHHHhHHHH
Confidence            44566778899999999998864


No 65 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=20.09  E-value=65  Score=22.76  Aligned_cols=19  Identities=21%  Similarity=0.424  Sum_probs=16.9

Q ss_pred             HHHHHHHHhHHhheeecCC
Q 010661          455 AAEYLLANLLYWFDWKLPG  473 (505)
Q Consensus       455 e~~~~l~~ll~~~~~~~~~  473 (505)
                      -|+-++..+|+-|||++++
T Consensus        61 ~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHhccCCceeee
Confidence            4788999999999999975


Done!