Query 010663
Match_columns 505
No_of_seqs 567 out of 4619
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 03:08:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010663.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010663hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.1E-56 2.3E-61 490.4 37.4 480 2-502 198-711 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.8E-49 6.2E-54 432.0 31.7 392 1-400 173-589 (968)
3 KOG4194 Membrane glycoprotein 100.0 2.1E-40 4.5E-45 310.6 6.0 375 17-399 79-456 (873)
4 KOG4194 Membrane glycoprotein 100.0 1.9E-38 4E-43 297.5 6.0 364 1-373 87-453 (873)
5 KOG0444 Cytoskeletal regulator 100.0 8.1E-37 1.8E-41 288.8 -2.5 361 1-377 16-380 (1255)
6 KOG0472 Leucine-rich repeat pr 100.0 3.7E-37 8E-42 276.6 -10.1 367 7-394 82-540 (565)
7 KOG0444 Cytoskeletal regulator 100.0 8.4E-36 1.8E-40 281.9 -3.4 369 14-399 5-379 (1255)
8 KOG0472 Leucine-rich repeat pr 100.0 1.8E-35 3.8E-40 265.9 -7.7 369 9-399 61-521 (565)
9 KOG0618 Serine/threonine phosp 100.0 2.6E-31 5.6E-36 262.4 -6.4 199 167-370 241-487 (1081)
10 PLN03210 Resistant to P. syrin 99.9 5.8E-26 1.2E-30 248.9 26.8 341 9-372 551-906 (1153)
11 PLN03210 Resistant to P. syrin 99.9 2.9E-25 6.3E-30 243.4 26.1 343 32-395 549-906 (1153)
12 KOG0618 Serine/threonine phosp 99.9 6.5E-29 1.4E-33 245.6 -3.9 346 2-369 54-510 (1081)
13 PRK15387 E3 ubiquitin-protein 99.9 2.1E-22 4.5E-27 205.6 17.0 183 144-355 283-465 (788)
14 PRK15387 E3 ubiquitin-protein 99.9 2.7E-22 5.8E-27 204.8 15.8 266 16-332 201-466 (788)
15 KOG4237 Extracellular matrix p 99.9 2.8E-24 6E-29 193.7 -2.4 268 21-298 51-357 (498)
16 PRK15370 E3 ubiquitin-protein 99.8 6.2E-21 1.3E-25 196.1 9.7 246 17-324 179-428 (754)
17 KOG4237 Extracellular matrix p 99.8 2.1E-22 4.6E-27 181.6 -4.4 286 68-372 70-359 (498)
18 PRK15370 E3 ubiquitin-protein 99.8 6.8E-20 1.5E-24 188.5 12.8 246 66-348 179-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.8 1.2E-20 2.5E-25 180.8 1.3 209 20-252 2-234 (319)
20 cd00116 LRR_RI Leucine-rich re 99.8 6.6E-21 1.4E-25 182.5 -1.2 280 69-370 2-318 (319)
21 KOG0617 Ras suppressor protein 99.8 1.4E-20 3.1E-25 150.7 -4.5 163 39-213 31-194 (264)
22 KOG0617 Ras suppressor protein 99.7 4.2E-20 9.1E-25 148.1 -3.8 164 12-189 29-194 (264)
23 PLN03150 hypothetical protein; 99.5 2E-14 4.2E-19 147.9 10.3 118 288-407 419-538 (623)
24 KOG0532 Leucine-rich repeat (L 99.4 2.1E-14 4.5E-19 136.4 -3.8 175 14-204 73-247 (722)
25 COG4886 Leucine-rich repeat (L 99.3 2.4E-12 5.1E-17 126.8 9.0 179 88-280 115-294 (394)
26 PLN03150 hypothetical protein; 99.3 5.7E-12 1.2E-16 129.8 11.8 112 265-376 420-532 (623)
27 COG4886 Leucine-rich repeat (L 99.3 2.7E-12 5.8E-17 126.4 8.2 178 144-329 117-295 (394)
28 KOG0532 Leucine-rich repeat (L 99.3 7.7E-14 1.7E-18 132.6 -3.1 180 7-202 89-271 (722)
29 KOG4658 Apoptotic ATPase [Sign 99.2 1.1E-11 2.4E-16 130.4 6.8 273 14-300 521-807 (889)
30 PF14580 LRR_9: Leucine-rich r 99.2 1.4E-11 3.1E-16 103.8 5.3 132 11-151 14-148 (175)
31 KOG1909 Ran GTPase-activating 99.2 1.6E-12 3.5E-17 116.7 -2.2 250 39-323 28-310 (382)
32 KOG3207 Beta-tubulin folding c 99.2 3E-12 6.5E-17 118.2 -0.5 110 190-300 221-339 (505)
33 KOG3207 Beta-tubulin folding c 99.2 7.8E-12 1.7E-16 115.5 1.6 211 63-276 119-339 (505)
34 KOG1259 Nischarin, modulator o 99.2 4.9E-12 1.1E-16 111.2 0.2 131 166-326 283-414 (490)
35 KOG1909 Ran GTPase-activating 99.1 1.1E-11 2.4E-16 111.5 1.0 240 10-251 24-310 (382)
36 KOG4658 Apoptotic ATPase [Sign 99.1 4.5E-11 9.6E-16 125.9 5.4 251 14-276 543-807 (889)
37 PF14580 LRR_9: Leucine-rich r 99.1 1.3E-10 2.9E-15 97.9 6.1 125 63-198 17-147 (175)
38 KOG1259 Nischarin, modulator o 99.1 2.2E-11 4.7E-16 107.2 0.4 230 11-255 177-415 (490)
39 KOG0531 Protein phosphatase 1, 99.0 8.8E-11 1.9E-15 115.8 -0.1 245 40-304 71-322 (414)
40 KOG0531 Protein phosphatase 1, 99.0 6E-11 1.3E-15 117.0 -2.0 268 40-328 48-322 (414)
41 PF13855 LRR_8: Leucine rich r 98.8 2.8E-09 6.2E-14 73.8 3.4 58 42-99 2-59 (61)
42 PF13855 LRR_8: Leucine rich r 98.8 3.4E-09 7.4E-14 73.4 3.1 59 312-370 2-60 (61)
43 KOG1187 Serine/threonine prote 98.7 1.3E-08 2.9E-13 97.5 4.1 39 467-505 61-99 (361)
44 KOG2120 SCF ubiquitin ligase, 98.7 6.9E-10 1.5E-14 97.8 -4.6 180 41-226 185-374 (419)
45 KOG2120 SCF ubiquitin ligase, 98.5 1.8E-09 3.9E-14 95.3 -6.1 223 121-369 139-373 (419)
46 KOG2982 Uncharacterized conser 98.5 3.2E-08 6.9E-13 87.5 0.9 86 39-128 69-156 (418)
47 KOG2982 Uncharacterized conser 98.4 4.8E-08 1E-12 86.4 0.7 86 88-177 70-156 (418)
48 KOG1859 Leucine-rich repeat pr 98.4 9.3E-09 2E-13 101.3 -4.7 179 208-397 102-294 (1096)
49 COG5238 RNA1 Ran GTPase-activa 98.4 1.5E-07 3.3E-12 82.3 2.4 170 11-180 25-227 (388)
50 KOG1859 Leucine-rich repeat pr 98.3 2.6E-08 5.5E-13 98.3 -5.1 127 17-156 165-292 (1096)
51 COG5238 RNA1 Ran GTPase-activa 98.3 1.7E-07 3.8E-12 81.9 0.3 36 39-74 28-67 (388)
52 PRK15386 type III secretion pr 98.2 4.1E-06 8.9E-11 79.7 8.7 54 40-99 51-104 (426)
53 KOG4579 Leucine-rich repeat (L 98.1 2.2E-07 4.7E-12 72.7 -1.8 82 66-155 54-135 (177)
54 PRK15386 type III secretion pr 98.1 1E-05 2.3E-10 77.1 8.8 137 11-177 47-187 (426)
55 PF12799 LRR_4: Leucine Rich r 98.0 5.9E-06 1.3E-10 52.2 3.2 35 43-78 3-37 (44)
56 KOG4579 Leucine-rich repeat (L 98.0 7.2E-07 1.6E-11 69.8 -1.5 135 16-161 27-164 (177)
57 KOG3665 ZYG-1-like serine/thre 98.0 4.1E-06 9E-11 86.6 3.4 110 16-131 122-233 (699)
58 PF12799 LRR_4: Leucine Rich r 98.0 8.9E-06 1.9E-10 51.4 3.4 37 16-54 1-37 (44)
59 KOG1644 U2-associated snRNP A' 97.9 1.5E-05 3.3E-10 67.0 4.4 106 18-131 21-126 (233)
60 KOG1644 U2-associated snRNP A' 97.8 2.8E-05 6.1E-10 65.4 5.0 104 143-248 42-149 (233)
61 KOG3665 ZYG-1-like serine/thre 97.8 1.3E-05 2.8E-10 83.0 2.5 135 14-150 146-282 (699)
62 PF13306 LRR_5: Leucine rich r 97.5 0.00034 7.5E-09 56.7 6.8 82 163-247 8-89 (129)
63 KOG4341 F-box protein containi 97.5 5.7E-06 1.2E-10 77.0 -4.2 277 17-299 139-438 (483)
64 KOG2739 Leucine-rich acidic nu 97.5 3.6E-05 7.9E-10 67.6 0.9 110 39-154 41-154 (260)
65 PF13306 LRR_5: Leucine rich r 97.4 0.00047 1E-08 55.9 6.7 38 210-248 7-44 (129)
66 KOG4341 F-box protein containi 97.3 1.3E-05 2.9E-10 74.6 -3.6 261 12-275 160-438 (483)
67 KOG2739 Leucine-rich acidic nu 97.3 0.00017 3.7E-09 63.5 3.0 110 57-174 35-150 (260)
68 KOG2123 Uncharacterized conser 97.2 2E-05 4.4E-10 69.5 -3.6 88 40-135 18-105 (388)
69 KOG1947 Leucine rich repeat pr 97.1 0.0001 2.2E-09 75.0 -0.8 65 115-179 240-307 (482)
70 KOG2123 Uncharacterized conser 97.0 2E-05 4.3E-10 69.6 -5.3 105 15-124 18-123 (388)
71 KOG1947 Leucine rich repeat pr 96.7 0.00017 3.7E-09 73.2 -3.1 239 87-348 186-440 (482)
72 PF00560 LRR_1: Leucine Rich R 95.6 0.0061 1.3E-07 31.8 1.0 17 18-35 2-18 (22)
73 PF00560 LRR_1: Leucine Rich R 95.4 0.006 1.3E-07 31.9 0.7 18 43-61 2-19 (22)
74 KOG3653 Transforming growth fa 95.4 0.068 1.5E-06 51.5 7.8 18 487-504 216-233 (534)
75 KOG4308 LRR-containing protein 94.2 0.00022 4.9E-09 70.7 -12.3 162 91-253 89-276 (478)
76 KOG1025 Epidermal growth facto 94.0 0.12 2.5E-06 53.6 6.1 19 484-502 699-717 (1177)
77 PF13504 LRR_7: Leucine rich r 93.9 0.035 7.5E-07 26.8 1.2 13 17-29 2-14 (17)
78 PLN03224 probable serine/threo 93.7 0.034 7.3E-07 56.1 1.8 24 479-502 143-166 (507)
79 KOG0473 Leucine-rich repeat pr 93.6 0.0019 4.2E-08 55.8 -6.1 92 31-131 32-124 (326)
80 KOG0473 Leucine-rich repeat pr 93.4 0.0027 5.8E-08 55.0 -5.4 89 10-102 36-124 (326)
81 KOG0196 Tyrosine kinase, EPH ( 93.3 0.087 1.9E-06 54.1 3.9 35 469-503 608-651 (996)
82 KOG4308 LRR-containing protein 93.1 0.0013 2.8E-08 65.4 -9.1 187 18-205 89-304 (478)
83 KOG0193 Serine/threonine prote 92.8 0.05 1.1E-06 54.0 1.5 28 470-504 388-415 (678)
84 smart00369 LRR_TYP Leucine-ric 92.5 0.11 2.4E-06 28.3 2.0 22 15-37 1-22 (26)
85 smart00370 LRR Leucine-rich re 92.5 0.11 2.4E-06 28.3 2.0 22 15-37 1-22 (26)
86 PLN03225 Serine/threonine-prot 92.4 0.073 1.6E-06 54.9 2.0 26 479-504 130-155 (566)
87 KOG2052 Activin A type IB rece 89.1 0.57 1.2E-05 45.1 4.5 20 486-505 216-235 (513)
88 PF13516 LRR_6: Leucine Rich r 88.6 0.19 4E-06 26.7 0.6 13 42-54 3-15 (24)
89 smart00369 LRR_TYP Leucine-ric 88.0 0.44 9.6E-06 25.8 1.9 12 67-78 4-15 (26)
90 smart00370 LRR Leucine-rich re 88.0 0.44 9.6E-06 25.8 1.9 12 67-78 4-15 (26)
91 PTZ00284 protein kinase; Provi 86.3 0.27 5.9E-06 49.7 0.7 31 473-503 121-151 (467)
92 KOG1035 eIF-2alpha kinase GCN2 84.5 0.34 7.3E-06 52.5 0.4 24 478-501 476-499 (1351)
93 KOG0194 Protein tyrosine kinas 83.1 0.7 1.5E-05 45.8 1.9 17 487-503 163-179 (474)
94 KOG3864 Uncharacterized conser 82.9 0.21 4.6E-06 42.7 -1.5 82 42-128 102-186 (221)
95 KOG3864 Uncharacterized conser 81.9 0.23 5E-06 42.5 -1.6 82 167-248 101-185 (221)
96 cd05622 STKc_ROCK1 Catalytic d 80.9 0.83 1.8E-05 44.6 1.6 32 472-503 34-65 (371)
97 KOG0663 Protein kinase PITSLRE 80.9 0.55 1.2E-05 43.5 0.3 20 482-501 77-96 (419)
98 PRK09605 bifunctional UGMP fam 79.3 0.88 1.9E-05 46.9 1.2 34 471-504 323-356 (535)
99 PTZ00036 glycogen synthase kin 79.0 1.2 2.5E-05 44.7 1.9 24 480-503 65-88 (440)
100 cd05621 STKc_ROCK2 Catalytic d 78.9 1 2.3E-05 43.9 1.5 28 476-503 38-65 (370)
101 KOG1095 Protein tyrosine kinas 78.5 1.1 2.4E-05 48.6 1.6 20 485-504 696-715 (1025)
102 cd05596 STKc_ROCK Catalytic do 76.7 0.97 2.1E-05 44.1 0.6 26 478-503 40-65 (370)
103 KOG0192 Tyrosine kinase specif 76.2 1.4 3E-05 42.5 1.5 17 488-504 48-64 (362)
104 cd05106 PTKc_CSF-1R Catalytic 76.0 1.4 3.1E-05 42.9 1.6 20 482-501 39-58 (374)
105 cd05105 PTKc_PDGFR_alpha Catal 75.1 1.7 3.8E-05 42.8 1.9 20 483-502 39-58 (400)
106 PHA03209 serine/threonine kina 73.5 2.3 5E-05 41.2 2.3 26 478-503 63-88 (357)
107 smart00364 LRR_BAC Leucine-ric 72.9 2.2 4.8E-05 23.1 1.1 17 17-34 3-19 (26)
108 PHA03211 serine/threonine kina 72.5 2.6 5.7E-05 42.4 2.5 23 482-504 170-192 (461)
109 cd05107 PTKc_PDGFR_beta Cataly 72.5 1.9 4.2E-05 42.5 1.5 20 484-503 40-59 (401)
110 PHA03210 serine/threonine kina 72.2 2.2 4.7E-05 43.6 1.8 23 480-502 147-169 (501)
111 KOG1024 Receptor-like protein 71.8 8.1 0.00017 37.0 5.2 31 474-504 277-307 (563)
112 smart00365 LRR_SD22 Leucine-ri 70.9 3.2 7E-05 22.6 1.5 16 89-104 2-17 (26)
113 KOG0605 NDR and related serine 70.4 2.8 6E-05 41.6 2.0 25 479-503 139-163 (550)
114 KOG4257 Focal adhesion tyrosin 70.4 1.9 4.2E-05 43.6 0.9 19 486-504 394-412 (974)
115 KOG0600 Cdc2-related protein k 70.3 1.3 2.7E-05 43.5 -0.3 15 487-501 123-137 (560)
116 KOG0986 G protein-coupled rece 70.2 2.7 5.9E-05 40.9 1.8 27 477-503 180-207 (591)
117 PLN00034 mitogen-activated pro 66.7 2.8 6.1E-05 40.5 1.2 17 487-503 80-96 (353)
118 KOG4258 Insulin/growth factor 65.1 5.8 0.00012 41.7 3.0 19 484-502 997-1015(1025)
119 KOG0694 Serine/threonine prote 62.1 4.7 0.0001 41.3 1.8 24 480-503 367-390 (694)
120 KOG1167 Serine/threonine prote 61.2 2.3 5E-05 40.7 -0.5 26 478-503 33-58 (418)
121 PHA03212 serine/threonine kina 59.8 5.3 0.00011 39.3 1.8 22 481-502 92-113 (391)
122 KOG1166 Mitotic checkpoint ser 59.0 5.4 0.00012 43.4 1.7 28 478-505 695-722 (974)
123 KOG4242 Predicted myosin-I-bin 58.7 40 0.00087 33.3 7.2 106 168-273 355-478 (553)
124 PF14575 EphA2_TM: Ephrin type 58.7 11 0.00023 27.0 2.6 18 469-486 55-72 (75)
125 smart00368 LRR_RI Leucine rich 58.0 7.9 0.00017 21.4 1.5 14 118-131 2-15 (28)
126 KOG3763 mRNA export factor TAP 57.8 3.5 7.6E-05 41.1 0.1 64 63-131 216-283 (585)
127 TIGR01982 UbiB 2-polyprenylphe 57.6 6.1 0.00013 39.4 1.8 24 481-505 118-141 (437)
128 KOG4242 Predicted myosin-I-bin 51.5 94 0.002 30.9 8.4 59 312-370 414-479 (553)
129 KOG1026 Nerve growth factor re 51.3 4.2 9E-05 42.7 -0.6 18 487-504 492-509 (774)
130 KOG4236 Serine/threonine prote 48.9 7.3 0.00016 38.8 0.7 19 483-502 567-585 (888)
131 KOG0581 Mitogen-activated prot 48.9 15 0.00033 34.8 2.7 27 470-503 75-101 (364)
132 KOG1006 Mitogen-activated prot 48.5 6.1 0.00013 35.7 0.1 25 470-501 60-84 (361)
133 PF04478 Mid2: Mid2 like cell 48.1 6.7 0.00015 32.0 0.3 12 480-491 111-122 (154)
134 PHA03207 serine/threonine kina 46.1 12 0.00027 36.7 1.9 21 482-502 93-113 (392)
135 KOG1151 Tousled-like protein k 45.1 2.7 5.8E-05 40.6 -2.8 15 487-501 469-483 (775)
136 smart00367 LRR_CC Leucine-rich 39.1 22 0.00048 19.0 1.4 13 117-129 1-13 (26)
137 PF08114 PMP1_2: ATPase proteo 37.7 47 0.001 20.2 2.6 7 442-448 29-35 (43)
138 KOG3763 mRNA export factor TAP 37.7 19 0.0004 36.3 1.6 67 36-104 213-285 (585)
139 PF15102 TMEM154: TMEM154 prot 37.1 34 0.00073 27.8 2.7 9 470-478 124-132 (146)
140 KOG0592 3-phosphoinositide-dep 36.0 21 0.00046 35.8 1.6 22 480-501 72-93 (604)
141 PRK04750 ubiB putative ubiquin 34.5 30 0.00066 35.5 2.6 24 481-505 120-144 (537)
142 KOG0696 Serine/threonine prote 34.1 21 0.00045 34.6 1.2 31 471-502 340-370 (683)
143 PTZ00267 NIMA-related protein 33.9 23 0.0005 35.9 1.7 20 483-502 69-88 (478)
144 KOG4279 Serine/threonine prote 33.2 24 0.00052 36.8 1.5 17 485-501 579-595 (1226)
145 KOG0197 Tyrosine kinases [Sign 32.4 21 0.00045 35.4 1.0 18 487-504 212-229 (468)
146 PF09919 DUF2149: Uncharacteri 30.4 29 0.00064 25.8 1.3 14 490-505 71-85 (92)
147 KOG0584 Serine/threonine prote 28.2 26 0.00055 35.8 0.8 14 488-501 47-60 (632)
148 KOG1989 ARK protein kinase fam 25.0 44 0.00095 35.4 1.8 19 486-504 42-60 (738)
149 TIGR00864 PCC polycystin catio 24.2 47 0.001 40.6 2.1 32 317-348 1-32 (2740)
150 KOG0200 Fibroblast/platelet-de 24.1 44 0.00095 35.1 1.7 17 487-503 302-318 (609)
151 KOG0664 Nemo-like MAPK-related 23.7 42 0.0009 30.6 1.2 18 484-501 56-73 (449)
152 KOG0199 ACK and related non-re 20.6 41 0.00089 35.2 0.6 16 488-503 117-132 (1039)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-56 Score=490.38 Aligned_cols=480 Identities=32% Similarity=0.485 Sum_probs=328.4
Q ss_pred CccccccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccC
Q 010663 2 NNLVGMVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLI 81 (505)
Q Consensus 2 n~~~~~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 81 (505)
|++++.+|..++++++|++|++++|.+.+.+|..+. ++++|++|++++|.+++.+|..++++++|++|++++|.+++.+
T Consensus 198 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 276 (968)
T PLN00113 198 NQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI 276 (968)
T ss_pred CCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccC
Confidence 677788888888888888888888888878888777 7888888888888887778888888888888888888887777
Q ss_pred cccccCCCCCCEEeccCccccCC-CCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCC
Q 010663 82 PDTIGNLRNLAWLGLAYNNLTSS-TSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIP 160 (505)
Q Consensus 82 ~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 160 (505)
|..+.++++|++|++++|.+.+. | ..+.++++|++|++++|.+.+.+|..+..+ ++|+.|++++|.+.+.+|
T Consensus 277 p~~l~~l~~L~~L~Ls~n~l~~~~p------~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 277 PPSIFSLQKLISLDLSDNSLSGEIP------ELVIQLQNLEILHLFSNNFTGKIPVALTSL-PRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred chhHhhccCcCEEECcCCeeccCCC------hhHcCCCCCcEEECCCCccCCcCChhHhcC-CCCCEEECcCCCCcCcCC
Confidence 77777788888888888777655 3 345556666666666666666666666555 456666666666665566
Q ss_pred ccccCCCCCCEEEccCCccccccCccccCCCCCC------------------------eEeccCccccccCCccCCCCCC
Q 010663 161 PAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQ------------------------GLFLAFNKLVGSCPDELCHLDR 216 (505)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~------------------------~L~l~~n~~~~~~~~~~~~~~~ 216 (505)
..++.+++|+.|++++|.+++.+|..+..+++|+ .|++++|.+++.+|..+..++.
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 429 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPL 429 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCC
Confidence 6566666666666666655555555554444444 4445445444444444445555
Q ss_pred CCeEeccCcccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeeccc
Q 010663 217 LDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSE 296 (505)
Q Consensus 217 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 296 (505)
|+.|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+ ..++|+.|++++|++.+..|..+..+++|+.|++++
T Consensus 430 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 508 (968)
T PLN00113 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508 (968)
T ss_pred CCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcC
Confidence 5555555555555444444455555555555555555555433 346677777777888788888888899999999999
Q ss_pred ccccccCCccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCC
Q 010663 297 NNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 376 (505)
Q Consensus 297 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p 376 (505)
|++.+.+|..+..+++|++|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.+++++|++.|.+|
T Consensus 509 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCccCcccccCCccCCCCC-CCCCCCCCCCCccccccccceeeehhHHHHHHHHHHHHHHHHHHhhhhhhcccc-c
Q 010663 377 SGGIFANFTAESFMGNELLCGLP-NLQVQPCKVSKPRTEHKSRKKILLIVIILPLSIALTIAITLHLKSKLIECGKRC-T 454 (505)
Q Consensus 377 ~~~~~~~~~~~~~~~n~~lc~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 454 (505)
..+.+..+....+.||+.+|+.+ ....++|... .+. ..+.+++ +++++++++++++++++ ++++++++ +
T Consensus 589 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----~~~-~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 659 (968)
T PLN00113 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----RKT-PSWWFYI-TCTLGAFLVLALVAFGF--VFIRGRNNLE 659 (968)
T ss_pred CcchhcccChhhhcCCccccCCccccCCCCCccc-----ccc-ceeeeeh-hHHHHHHHHHHHHHHHH--HHHHhhhccc
Confidence 99888889999999999999843 2234456421 111 1222222 11122222222221111 11111111 1
Q ss_pred cC--CCCcccccc-----cccccccHHHHHHHHhCcccCCeeecCCCceEEEEEc
Q 010663 455 VL--SNDSVLSSQ-----ATLRRFSYLELLQATDNFAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 455 ~~--~~~~~~~~~-----~~~~~~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L 502 (505)
.+ ......+.. ...+.++++++. ..|.+.++||+|+||.||||+.
T Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~ 711 (968)
T PLN00113 660 LKRVENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKS 711 (968)
T ss_pred ccccccccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEE
Confidence 11 100111111 112335566554 4578889999999999999986
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.8e-49 Score=431.97 Aligned_cols=392 Identities=35% Similarity=0.573 Sum_probs=337.3
Q ss_pred CCccccccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCcc
Q 010663 1 MNNLVGMVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGL 80 (505)
Q Consensus 1 ~n~~~~~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 80 (505)
+|.+++.+|.++.++++|++|++++|.+.+.+|..+. .+++|++|++++|.+++.+|..++++++|++|++++|.+++.
T Consensus 173 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 251 (968)
T PLN00113 173 GNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELG-QMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGP 251 (968)
T ss_pred cCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHc-CcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccc
Confidence 4788999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCEEeccCccccCC-CCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccC
Q 010663 81 IPDTIGNLRNLAWLGLAYNNLTSS-TSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNI 159 (505)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~ 159 (505)
+|..++++++|++|++++|.+.+. | ..+.++++|++|++++|.+.+.+|..+..+ ++|++|++++|.+.+.+
T Consensus 252 ~p~~l~~l~~L~~L~L~~n~l~~~~p------~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~L~l~~n~~~~~~ 324 (968)
T PLN00113 252 IPSSLGNLKNLQYLFLYQNKLSGPIP------PSIFSLQKLISLDLSDNSLSGEIPELVIQL-QNLEILHLFSNNFTGKI 324 (968)
T ss_pred cChhHhCCCCCCEEECcCCeeeccCc------hhHhhccCcCEEECcCCeeccCCChhHcCC-CCCcEEECCCCccCCcC
Confidence 999999999999999999999876 5 678899999999999999999999999888 79999999999999999
Q ss_pred CccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCC
Q 010663 160 PPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLT 239 (505)
Q Consensus 160 ~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 239 (505)
|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..++
T Consensus 325 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~ 404 (968)
T PLN00113 325 PVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACR 404 (968)
T ss_pred ChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCC
Confidence 99999999999999999999999999999999999999999999988888777777777777777777766666666666
Q ss_pred CCCceeccCccCCCCCCccccCCCCCCEEEccCCcccccccccccc-----------------------ccCCCeeeccc
Q 010663 240 SLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGN-----------------------LKVLLGINLSE 296 (505)
Q Consensus 240 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-----------------------~~~L~~L~l~~ 296 (505)
+|+.|++++|.+++.+|..+..++.|+.|++++|.+.+.++..+.. .++|+.|++++
T Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 484 (968)
T PLN00113 405 SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSR 484 (968)
T ss_pred CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcC
Confidence 6666666666666666666666666666666655555544443333 35566777777
Q ss_pred ccccccCCccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCC
Q 010663 297 NNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 376 (505)
Q Consensus 297 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p 376 (505)
|++++.+|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|.+++.+|..+..+++|+.|++++|++++.+|
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 77777778888888899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CccCccCcccccCCccCCCCCC
Q 010663 377 SG-GIFANFTAESFMGNELLCGLPN 400 (505)
Q Consensus 377 ~~-~~~~~~~~~~~~~n~~lc~~~~ 400 (505)
.. ..+..+..+++.+|+..+..|.
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred hhHhcCcccCEEeccCCcceeeCCC
Confidence 65 4456677888889987766664
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=310.55 Aligned_cols=375 Identities=24% Similarity=0.273 Sum_probs=326.8
Q ss_pred CCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEec
Q 010663 17 TLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGL 96 (505)
Q Consensus 17 ~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L 96 (505)
.-+.|++++|.++ ++-...+.++++|+.+++..|.++ .+|...+...+|+.|+|.+|.|+..-...+..++.|+.|||
T Consensus 79 ~t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 79 QTQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred ceeeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 3467999999999 555444449999999999999998 88988888889999999999999888888999999999999
Q ss_pred cCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccC
Q 010663 97 AYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEG 176 (505)
Q Consensus 97 ~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 176 (505)
+.|.++.++. ..+..-.++++|+|++|.++..-...|..+ .+|..|.|+.|+++...+..|.++++|+.|+|..
T Consensus 157 SrN~is~i~~-----~sfp~~~ni~~L~La~N~It~l~~~~F~~l-nsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 157 SRNLISEIPK-----PSFPAKVNIKKLNLASNRITTLETGHFDSL-NSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hhchhhcccC-----CCCCCCCCceEEeecccccccccccccccc-chheeeecccCcccccCHHHhhhcchhhhhhccc
Confidence 9999998853 456677899999999999997777788888 5899999999999966667888899999999999
Q ss_pred CccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCceeccCccCCCCCC
Q 010663 177 NKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIP 256 (505)
Q Consensus 177 n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 256 (505)
|++.-..--.|.++++|+.|.+..|.+.......|..+.++++|+|+.|+++..-..++.++++|+.|+++.|.+..+-+
T Consensus 231 N~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 231 NRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred cceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec
Confidence 99985546679999999999999999998888889999999999999999998778889999999999999999999988
Q ss_pred ccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCc---cCcC
Q 010663 257 STFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPE---SFDD 333 (505)
Q Consensus 257 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---~~~~ 333 (505)
+....+++|++|+|+.|++....+..+..+..|++|+|++|.+...--..|..+++|++|||++|.++..+-+ .|..
T Consensus 311 d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred chhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 9999999999999999999988889999999999999999999866667788999999999999999876643 5778
Q ss_pred CCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCCCCCccCccCcccccCCccCCCCC
Q 010663 334 LTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLP 399 (505)
Q Consensus 334 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 399 (505)
+++|+.|++.+|++....-..|..++.|++||+.+|.+...-|.+-.-..++.+.+..-..+|+|.
T Consensus 391 l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQ 456 (873)
T ss_pred chhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEecc
Confidence 999999999999999665678999999999999999998777765322255666666666778763
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=297.47 Aligned_cols=364 Identities=24% Similarity=0.259 Sum_probs=326.6
Q ss_pred CCccccccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCcc
Q 010663 1 MNNLVGMVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGL 80 (505)
Q Consensus 1 ~n~~~~~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 80 (505)
+|.++..-+..|.++++|+.+++..|.++ .||.... ...+|+.|+|..|.|+..-.+++.-++.|+.|||+.|.++.+
T Consensus 87 nNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~-~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i 164 (873)
T KOG4194|consen 87 NNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGH-ESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEI 164 (873)
T ss_pred ccccccCcHHHHhcCCcceeeeeccchhh-hcccccc-cccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcc
Confidence 47777788888999999999999999999 9999887 688899999999999977788999999999999999999977
Q ss_pred CcccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCC
Q 010663 81 IPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIP 160 (505)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 160 (505)
.-..|..-.++++|+|++|.|+.... ..|.++.+|..|.|++|+++..-+..|.++ ++|+.|+|..|++.-.--
T Consensus 165 ~~~sfp~~~ni~~L~La~N~It~l~~-----~~F~~lnsL~tlkLsrNrittLp~r~Fk~L-~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 165 PKPSFPAKVNIKKLNLASNRITTLET-----GHFDSLNSLLTLKLSRNRITTLPQRSFKRL-PKLESLDLNRNRIRIVEG 238 (873)
T ss_pred cCCCCCCCCCceEEeecccccccccc-----ccccccchheeeecccCcccccCHHHhhhc-chhhhhhccccceeeehh
Confidence 66778888999999999999998843 678888999999999999994444445557 799999999999974445
Q ss_pred ccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCC
Q 010663 161 PAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTS 240 (505)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 240 (505)
-.|..+++|+.|.+..|++.......|..|.++++|+|+.|++...--.++.+++.|+.|++++|.+....++.+..+++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 67889999999999999999877888999999999999999999888889999999999999999999888999999999
Q ss_pred CCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCc---cccCCCCCcEEe
Q 010663 241 LRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPA---TIGGLKSLQIMD 317 (505)
Q Consensus 241 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~---~~~~l~~L~~L~ 317 (505)
|+.|+|++|+++...+..|..+..|+.|+|++|.+...-...|..+++|++|||.+|.++..+-+ .|..+++|+.|+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 99999999999999999999999999999999999887778889999999999999999876543 477899999999
Q ss_pred CcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcc
Q 010663 318 LAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEG 373 (505)
Q Consensus 318 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~ 373 (505)
+.+|++....-.+|..++.|+.|||.+|.+...-|..|..+ .|++|.+..-.+..
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLC 453 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEE
Confidence 99999997777899999999999999999998889999988 89988877555443
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.1e-37 Score=288.76 Aligned_cols=361 Identities=25% Similarity=0.360 Sum_probs=302.2
Q ss_pred CCccc-cccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCc
Q 010663 1 MNNLV-GMVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSG 79 (505)
Q Consensus 1 ~n~~~-~~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 79 (505)
.|.|+ +.+|.....++.++.|.|...++. .+|++++ .|.+|++|.++.|++. .+-..+..++.|+.+++.+|++..
T Consensus 16 gNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~-~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKn 92 (1255)
T KOG0444|consen 16 GNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELS-RLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKN 92 (1255)
T ss_pred CCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHH-HHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhcccccc
Confidence 37788 788999999999999999999998 9999998 7999999999999887 555677888899999999887753
Q ss_pred c-CcccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCcccc
Q 010663 80 L-IPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGN 158 (505)
Q Consensus 80 ~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~ 158 (505)
. +|..+-.+..|..|||++|++...| ..+.+.+++-+|+|++|++. .||..++--...|-.|||++|.+. .
T Consensus 93 sGiP~diF~l~dLt~lDLShNqL~EvP------~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~ 164 (1255)
T KOG0444|consen 93 SGIPTDIFRLKDLTILDLSHNQLREVP------TNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-M 164 (1255)
T ss_pred CCCCchhcccccceeeecchhhhhhcc------hhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-h
Confidence 3 6777888999999999999999888 67888889999999999988 667665543378889999999987 7
Q ss_pred CCccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCcccc-ccCCccCCCCCCCCeEeccCcccccccCccccC
Q 010663 159 IPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLV-GSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSN 237 (505)
Q Consensus 159 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 237 (505)
+|+.+..+..|++|+|++|.+...--..+..+.+|+.|++++.+-+ ..+|.++..+.+|..++++.|++. .+|..+.+
T Consensus 165 LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~ 243 (1255)
T KOG0444|consen 165 LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK 243 (1255)
T ss_pred cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhh
Confidence 7888888999999999999876544444556778888888876543 458888889999999999999988 88999999
Q ss_pred CCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeeccccccc-ccCCccccCCCCCcEE
Q 010663 238 LTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLS-GDMPATIGGLKSLQIM 316 (505)
Q Consensus 238 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L 316 (505)
+++|+.|+|++|.++. +......+.+|+.|+++.|+++ .+|..+..++.|+.|.+.+|+++ .-+|+.++.+..|+.+
T Consensus 244 l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf 321 (1255)
T KOG0444|consen 244 LRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVF 321 (1255)
T ss_pred hhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHH
Confidence 9999999999999884 4445566788999999999997 77888899999999999999875 3478889999999999
Q ss_pred eCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCCC
Q 010663 317 DLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 377 (505)
Q Consensus 317 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p~ 377 (505)
..++|.+. .+|+.+..|..|+.|.|+.|.+. .+|+.+.-++.|+.||+..|+-.-..|.
T Consensus 322 ~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 322 HAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred Hhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 99998887 88999999999999999999988 7899999999999999999876544443
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.7e-37 Score=276.65 Aligned_cols=367 Identities=32% Similarity=0.474 Sum_probs=218.3
Q ss_pred ccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCccccc
Q 010663 7 MVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIG 86 (505)
Q Consensus 7 ~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~ 86 (505)
.+|++++.+..++.++.++|++. ++|+.++ .+.+|+.++++.|.+. .+|+.++.+..|+.++..+|+++ ..|.++.
T Consensus 82 ~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~-s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~ 157 (565)
T KOG0472|consen 82 QLPAAIGELEALKSLNVSHNKLS-ELPEQIG-SLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMV 157 (565)
T ss_pred hCCHHHHHHHHHHHhhcccchHh-hccHHHh-hhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHH
Confidence 34556666666666666666665 6666665 5666666666666665 55556666666666666666655 3455555
Q ss_pred CCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCC
Q 010663 87 NLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNL 166 (505)
Q Consensus 87 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 166 (505)
++.+|..+++.+|.++..| ....+++.|++||...|-++ .+|+.++.+ .+|+.|++..|.+. .+| .|..|
T Consensus 158 ~~~~l~~l~~~~n~l~~l~------~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l-~~L~~LyL~~Nki~-~lP-ef~gc 227 (565)
T KOG0472|consen 158 NLSKLSKLDLEGNKLKALP------ENHIAMKRLKHLDCNSNLLE-TLPPELGGL-ESLELLYLRRNKIR-FLP-EFPGC 227 (565)
T ss_pred HHHHHHHhhccccchhhCC------HHHHHHHHHHhcccchhhhh-cCChhhcch-hhhHHHHhhhcccc-cCC-CCCcc
Confidence 5556666666666555554 22333555566665555544 556566555 45566666655554 333 44444
Q ss_pred CCCCEEEccCCccccccCcccc-CCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCcee
Q 010663 167 SNLLTLVLEGNKLTGPIPTTFG-RLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLY 245 (505)
Q Consensus 167 ~~L~~L~l~~n~~~~~~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 245 (505)
..|+++++..|++. .+|.... +++++..|++.+|++. ..|+.++.+.+|++||+++|.++ .+|..++++ .|+.|-
T Consensus 228 s~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~ 303 (565)
T KOG0472|consen 228 SLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLA 303 (565)
T ss_pred HHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehh
Confidence 44444444444444 2333222 4555555555555554 44555555555555555555555 344445555 555555
Q ss_pred ccCccC-----------------------------------------------------------------CCCCCcccc
Q 010663 246 LGSNRF-----------------------------------------------------------------TSVIPSTFW 260 (505)
Q Consensus 246 l~~n~~-----------------------------------------------------------------~~~~~~~~~ 260 (505)
+.+|.+ +. +|...+
T Consensus 304 leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVf 382 (565)
T KOG0472|consen 304 LEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTL-VPDEVF 382 (565)
T ss_pred hcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccccc-CCHHHH
Confidence 555442 21 122111
Q ss_pred CCCC---CCEEEccCCccc-----------------------cccccccccccCCCeeecccccccccCCccccCCCCCc
Q 010663 261 RLKD---ILFLDFSSNLLV-----------------------GTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQ 314 (505)
Q Consensus 261 ~~~~---L~~L~l~~n~l~-----------------------~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 314 (505)
.... .+.++++.|++. +.+|..+..+++|..|++++|.+. .+|..++.+-.|+
T Consensus 383 ea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq 461 (565)
T KOG0472|consen 383 EAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQ 461 (565)
T ss_pred HHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhh
Confidence 1111 344555555542 234445667788889999888777 7888888888899
Q ss_pred EEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCCCCCccCccCcccccCCcc
Q 010663 315 IMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNEL 394 (505)
Q Consensus 315 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~~n~~ 394 (505)
.|+++.|++. .+|..+..+..++.+-.++|++....|..+.++.+|..||+.+|.+....|.-+.+.++..+.++|||+
T Consensus 462 ~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 462 TLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred eecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 9999999887 677777666667777777777775555557778888888888887765555556777777777788774
No 7
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.4e-36 Score=281.92 Aligned_cols=369 Identities=25% Similarity=0.372 Sum_probs=324.6
Q ss_pred cCCCCcEEEcccccccc-cCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCC
Q 010663 14 NMSTLKIIILINNSLSG-SLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLA 92 (505)
Q Consensus 14 ~l~~L~~L~ls~n~~~~-~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~ 92 (505)
-++-++-.|+++|.|+| ..|.... ++..++-|.|.+..+. .+|+.++.|.+|++|.+++|++. .+-..+..++.|+
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~-qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVE-QMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHH-HhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 45667889999999995 7899998 7999999999999887 89999999999999999999987 3456688899999
Q ss_pred EEeccCccccCC--CCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCC
Q 010663 93 WLGLAYNNLTSS--TSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLL 170 (505)
Q Consensus 93 ~L~L~~n~l~~~--~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 170 (505)
.+.+.+|++... | ..+..+..|+.|||++|++. ..|..+... +++..|+|++|+|..+....|-+++.|-
T Consensus 82 sv~~R~N~LKnsGiP------~diF~l~dLt~lDLShNqL~-EvP~~LE~A-Kn~iVLNLS~N~IetIPn~lfinLtDLL 153 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIP------TDIFRLKDLTILDLSHNQLR-EVPTNLEYA-KNSIVLNLSYNNIETIPNSLFINLTDLL 153 (1255)
T ss_pred HHhhhccccccCCCC------chhcccccceeeecchhhhh-hcchhhhhh-cCcEEEEcccCccccCCchHHHhhHhHh
Confidence 999999998755 5 77889999999999999998 789988886 8999999999999844445667899999
Q ss_pred EEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccc-cccCccccCCCCCCceeccCc
Q 010663 171 TLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFS-GSIPSCLSNLTSLRFLYLGSN 249 (505)
Q Consensus 171 ~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n 249 (505)
.|||++|++. .+|..+..+..|+.|.|++|.+.-..-..+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|
T Consensus 154 fLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N 232 (1255)
T KOG0444|consen 154 FLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSEN 232 (1255)
T ss_pred hhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhcccccc
Confidence 9999999998 78888999999999999999987666666778889999999987644 468999999999999999999
Q ss_pred cCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccc-cCC
Q 010663 250 RFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEG-QIP 328 (505)
Q Consensus 250 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~ 328 (505)
.+. .+|+.+.++++|+.|+|++|.++ .+........+|++|+++.|+++ .+|+.++.+++|+.|.+.+|+++- -+|
T Consensus 233 ~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiP 309 (1255)
T KOG0444|consen 233 NLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIP 309 (1255)
T ss_pred CCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCc
Confidence 998 68999999999999999999997 44445566789999999999999 899999999999999999999753 479
Q ss_pred ccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCCCC-CccCccCcccccCCccCCCCC
Q 010663 329 ESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG-GIFANFTAESFMGNELLCGLP 399 (505)
Q Consensus 329 ~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 399 (505)
+.++.+.+|+++...+|.+. ..|+.+..+..|+.|.++.|.+. .+|.+ ..+..+..+++..||.+.-.|
T Consensus 310 SGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 310 SGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred cchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 99999999999999999988 89999999999999999999987 45654 556788889999999876544
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.98 E-value=1.8e-35 Score=265.90 Aligned_cols=369 Identities=30% Similarity=0.437 Sum_probs=301.2
Q ss_pred chhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCC
Q 010663 9 SATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNL 88 (505)
Q Consensus 9 ~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l 88 (505)
.+.+.++..|.+|++++|++. ++|++++ .+..++.++.+.|++. .+|+.++.+.+|+.++.+.|.+. .+|+.++.+
T Consensus 61 ~~dl~nL~~l~vl~~~~n~l~-~lp~aig-~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~ 136 (565)
T KOG0472|consen 61 REDLKNLACLTVLNVHDNKLS-QLPAAIG-ELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRL 136 (565)
T ss_pred cHhhhcccceeEEEeccchhh-hCCHHHH-HHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHH
Confidence 345778888899999999998 8999998 7999999999999998 88999999999999999999988 567778999
Q ss_pred CCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCC
Q 010663 89 RNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSN 168 (505)
Q Consensus 89 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~ 168 (505)
-.|+.++..+|+++..| .++.++.+|..+++.+|.+.. .|+....+ +.|++|+...|.+. .+|+.++.+.+
T Consensus 137 ~~l~dl~~~~N~i~slp------~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m-~~L~~ld~~~N~L~-tlP~~lg~l~~ 207 (565)
T KOG0472|consen 137 LDLEDLDATNNQISSLP------EDMVNLSKLSKLDLEGNKLKA-LPENHIAM-KRLKHLDCNSNLLE-TLPPELGGLES 207 (565)
T ss_pred hhhhhhhccccccccCc------hHHHHHHHHHHhhccccchhh-CCHHHHHH-HHHHhcccchhhhh-cCChhhcchhh
Confidence 99999999999999888 678889999999999999984 44444456 78999999999887 89999999999
Q ss_pred CCEEEccCCccccccCccccCCCCCCeEeccCccccccCCcc-CCCCCCCCeEeccCcccccccCccccCCCCCCceecc
Q 010663 169 LLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDE-LCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLG 247 (505)
Q Consensus 169 L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 247 (505)
|+.|++..|.+. .+| .|..|..|++|++..|++. .+|.. ..+++++..||+..|++. +.|+.+..+.+|..||++
T Consensus 208 L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlS 283 (565)
T KOG0472|consen 208 LELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLS 283 (565)
T ss_pred hHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhccc
Confidence 999999999998 677 6999999999999999997 45544 448999999999999999 889999999999999999
Q ss_pred CccCCCCCCccccCCCCCCEEEccCCccccc--------------------------------------ccccc---ccc
Q 010663 248 SNRFTSVIPSTFWRLKDILFLDFSSNLLVGT--------------------------------------LSFDI---GNL 286 (505)
Q Consensus 248 ~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~--------------------------------------~~~~~---~~~ 286 (505)
+|.+++ .|..++++ .|++|.+.+|.+... .+..+ ..+
T Consensus 284 NN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~ 361 (565)
T KOG0472|consen 284 NNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAI 361 (565)
T ss_pred CCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhh
Confidence 999996 67788888 999999999876210 00000 001
Q ss_pred cC--------------------------CCeeecccccccc-----------------------cCCccccCCCCCcEEe
Q 010663 287 KV--------------------------LLGINLSENNLSG-----------------------DMPATIGGLKSLQIMD 317 (505)
Q Consensus 287 ~~--------------------------L~~L~l~~n~~~~-----------------------~~~~~~~~l~~L~~L~ 317 (505)
.+ ....+++.|++.. -+|..++.+++|..|+
T Consensus 362 i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~ 441 (565)
T KOG0472|consen 362 ITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLD 441 (565)
T ss_pred hhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeee
Confidence 11 2244555555441 3445566789999999
Q ss_pred CcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCCC-CCccCccCcccccCCccCC
Q 010663 318 LAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS-GGIFANFTAESFMGNELLC 396 (505)
Q Consensus 318 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~~~n~~lc 396 (505)
|++|.+. .+|.+++.+..|+.|+++.|++. .+|..+..+..++.+-.++|++...-|+ ...+.++..+++..|. +-
T Consensus 442 L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNd-lq 518 (565)
T KOG0472|consen 442 LSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNND-LQ 518 (565)
T ss_pred cccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCc-hh
Confidence 9999888 78999999999999999999998 8899988888888888888988644444 2557788888887776 44
Q ss_pred CCC
Q 010663 397 GLP 399 (505)
Q Consensus 397 ~~~ 399 (505)
..|
T Consensus 519 ~IP 521 (565)
T KOG0472|consen 519 QIP 521 (565)
T ss_pred hCC
Confidence 433
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-31 Score=262.40 Aligned_cols=199 Identities=30% Similarity=0.364 Sum_probs=96.7
Q ss_pred CCCCEEEccCCccccccCccccCCCCCCeEeccCccccc----------------------cCCccCCCCCCCCeEeccC
Q 010663 167 SNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVG----------------------SCPDELCHLDRLDKLVLLG 224 (505)
Q Consensus 167 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~----------------------~~~~~~~~~~~L~~L~l~~ 224 (505)
.+|++++++.|+++ .+|++++.+.+|+.++..+|+++. .+|.....+..|+.|+|..
T Consensus 241 ~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred ccceeeecchhhhh-cchHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehh
Confidence 34555555555555 344555555555555555555531 3344444555556666655
Q ss_pred cccccccCccc-c-------------------------CCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccc
Q 010663 225 NKFSGSIPSCL-S-------------------------NLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGT 278 (505)
Q Consensus 225 n~l~~~~~~~~-~-------------------------~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 278 (505)
|++. .+|+.+ . .++.|+.|++.+|.++...-..+.++++|+.|+|++|++...
T Consensus 320 N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 320 NNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred cccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 5554 222211 0 112344444444444444444444555555555555555433
Q ss_pred cccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCC
Q 010663 279 LSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKL 358 (505)
Q Consensus 279 ~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l 358 (505)
....+.++..|++|+|++|+++ .+|..+..+..|++|...+|++. ..| ++..++.|+.+|++.|+++...-..-...
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC
Confidence 3334445555555555555555 44555555555555555555554 333 45555555555555555543221111112
Q ss_pred CCCCEEeCcCCc
Q 010663 359 FYLRELNLSFNE 370 (505)
Q Consensus 359 ~~L~~l~l~~n~ 370 (505)
++|++||+++|.
T Consensus 476 p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 476 PNLKYLDLSGNT 487 (1081)
T ss_pred cccceeeccCCc
Confidence 455555555554
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.95 E-value=5.8e-26 Score=248.94 Aligned_cols=341 Identities=22% Similarity=0.287 Sum_probs=272.3
Q ss_pred chhhhcCCCCcEEEccccc------ccccCchhhhcCC-CCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccC
Q 010663 9 SATIFNMSTLKIIILINNS------LSGSLPSRIGLSL-PTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLI 81 (505)
Q Consensus 9 ~~~~~~l~~L~~L~ls~n~------~~~~ip~~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 81 (505)
+.+|.+|++|+.|.++.+. +...+|..+. .+ .+|+.|.+.++.++ .+|..| ...+|+.|++.+|.+. .+
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~-~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFD-YLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchh-hcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cc
Confidence 3578999999999997664 3336777776 44 56999999999886 778877 5789999999999987 46
Q ss_pred cccccCCCCCCEEeccCcc-ccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCC
Q 010663 82 PDTIGNLRNLAWLGLAYNN-LTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIP 160 (505)
Q Consensus 82 ~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 160 (505)
+..+..+++|+.|+|+++. +...| .+..+++|+.|++++|.....+|..+..+ ++|+.|++++|.....+|
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip-------~ls~l~~Le~L~L~~c~~L~~lp~si~~L-~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIP-------DLSMATNLETLKLSDCSSLVELPSSIQYL-NKLEDLDMSRCENLEILP 698 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCC-------ccccCCcccEEEecCCCCccccchhhhcc-CCCCEEeCCCCCCcCccC
Confidence 7778899999999999875 44444 46788999999999988777899999888 789999999987666778
Q ss_pred ccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccc-------cccCc
Q 010663 161 PAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFS-------GSIPS 233 (505)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~-------~~~~~ 233 (505)
..+ ++++|+.|++++|.....+|.. ..+|++|++++|.+. .+|..+ .+++|++|.+.++... ...+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchh
Confidence 766 7899999999999766566643 468899999999876 456554 5788888888764321 11122
Q ss_pred cccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCccccCCCCC
Q 010663 234 CLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSL 313 (505)
Q Consensus 234 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L 313 (505)
.....++|+.|++++|.....+|..+.++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. ..+|
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL 848 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNI 848 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---cccc
Confidence 23345789999999998888899999999999999999987666777665 7899999999998665556543 3678
Q ss_pred cEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCc
Q 010663 314 QIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELE 372 (505)
Q Consensus 314 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~ 372 (505)
+.|+|++|.++ .+|..+..+++|++|++++|+-...+|..+..+++|+.+++++|.-.
T Consensus 849 ~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~L 906 (1153)
T PLN03210 849 SDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906 (1153)
T ss_pred CEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCccc
Confidence 99999999998 67888999999999999997666678888888999999999998643
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.94 E-value=2.9e-25 Score=243.41 Aligned_cols=343 Identities=21% Similarity=0.220 Sum_probs=271.8
Q ss_pred CchhhhcCCCCCCEEeccCCc------ccccCchhhhCCC-CCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCC
Q 010663 32 LPSRIGLSLPTVEHLNLALNR------FSGTIPSSITNAS-KLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSS 104 (505)
Q Consensus 32 ip~~~~~~l~~L~~L~l~~n~------~~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 104 (505)
+....+..|++|+.|.+..+. +...+|..+..++ +|+.|.+.++.+. .+|..| ...+|++|++.+|.+...
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L 626 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKL 626 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccccc
Confidence 334444489999999996553 3345777787765 7999999999887 567767 579999999999998877
Q ss_pred CCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccCCccccccC
Q 010663 105 TSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIP 184 (505)
Q Consensus 105 ~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 184 (505)
+ ..+..+++|+.|+++++.....+|. +..+ ++|++|++++|.....+|..+.++++|+.|++++|.....+|
T Consensus 627 ~------~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l-~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 627 W------DGVHSLTGLRNIDLRGSKNLKEIPD-LSMA-TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred c------cccccCCCCCEEECCCCCCcCcCCc-cccC-CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccC
Confidence 6 5678899999999999875557774 5565 799999999998777899999999999999999987666788
Q ss_pred ccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCceeccCccC-------CCCCCc
Q 010663 185 TTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRF-------TSVIPS 257 (505)
Q Consensus 185 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~-------~~~~~~ 257 (505)
..+ ++++|+.|++++|...+.+|.. ..+|++|++++|.+. .+|..+ .+++|+.|.+.++.. ....+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchh
Confidence 765 7999999999999876666653 468999999999987 677655 578899998877432 112222
Q ss_pred cccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCccCcCCCCC
Q 010663 258 TFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSL 337 (505)
Q Consensus 258 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 337 (505)
.+..+++|+.|++++|.....+|..+.++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. .++|
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL 848 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNI 848 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---cccc
Confidence 33446789999999999888899999999999999999987655788766 7899999999999766566653 4689
Q ss_pred CEEECcCCcCcccCCccccCCCCCCEEeCcCCcCcccCCCC-CccCccCcccccCCccC
Q 010663 338 EVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG-GIFANFTAESFMGNELL 395 (505)
Q Consensus 338 ~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~~~~p~~-~~~~~~~~~~~~~n~~l 395 (505)
++|++++|.+. .+|..+..+++|+.|++++|+-...+|.. ..+..+..+.+.+++.+
T Consensus 849 ~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~L 906 (1153)
T PLN03210 849 SDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906 (1153)
T ss_pred CEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCccc
Confidence 99999999998 68999999999999999997655556643 34455555566665544
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.94 E-value=6.5e-29 Score=245.57 Aligned_cols=346 Identities=30% Similarity=0.389 Sum_probs=234.5
Q ss_pred CccccccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccC
Q 010663 2 NNLVGMVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLI 81 (505)
Q Consensus 2 n~~~~~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 81 (505)
|+..+.+|..+..+.+|+.|+++.|.+. .+|.++. ++.+|+++.|..|.+. .+|..+..+.+|++|+++.|.+. .+
T Consensus 54 nn~~~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~-~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~ 129 (1081)
T KOG0618|consen 54 NNQISSFPIQITLLSHLRQLNLSRNYIR-SVPSSCS-NMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PI 129 (1081)
T ss_pred ccccccCCchhhhHHHHhhcccchhhHh-hCchhhh-hhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CC
Confidence 5556677777777777777887777777 7777776 6777777777777665 67777777777777777777665 33
Q ss_pred cccccCCCCCCE-----------------------------------------EeccCccccCCCCCcccccccCCCC--
Q 010663 82 PDTIGNLRNLAW-----------------------------------------LGLAYNNLTSSTSKLSFLSSLANCK-- 118 (505)
Q Consensus 82 ~~~l~~l~~L~~-----------------------------------------L~L~~n~l~~~~~~~~~~~~l~~l~-- 118 (505)
|..+..+..+++ |+|.+|.+... .+.+++
T Consensus 130 Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~--------dls~~~~l 201 (1081)
T KOG0618|consen 130 PLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVL--------DLSNLANL 201 (1081)
T ss_pred chhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhh--------hhhhccch
Confidence 433333333333 33333333210 111111
Q ss_pred ------------------CCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccCCc--
Q 010663 119 ------------------KLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNK-- 178 (505)
Q Consensus 119 ------------------~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-- 178 (505)
+|+.|+...|.++...+ ...+.+|++++++.|+++ .+|.+++.+.+|+.++..+|+
T Consensus 202 ~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~---~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~ 277 (1081)
T KOG0618|consen 202 EVLHCERNQLSELEISGPSLTALYADHNPLTTLDV---HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV 277 (1081)
T ss_pred hhhhhhhcccceEEecCcchheeeeccCcceeecc---ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH
Confidence 22222222222221000 001134555555555554 344555555555555555554
Q ss_pred ---------------------cccccCccccCCCCCCeEeccCccccccCCccC--------------------------
Q 010663 179 ---------------------LTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDEL-------------------------- 211 (505)
Q Consensus 179 ---------------------~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~-------------------------- 211 (505)
+. .+|......+.|++|+|..|.+.. .|+.+
T Consensus 278 ~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 278 ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 44 356667778899999999998763 23211
Q ss_pred CCCCCCCeEeccCcccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCe
Q 010663 212 CHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLG 291 (505)
Q Consensus 212 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 291 (505)
..++.|+.|++.+|.++...-+.+..+++|+.|+|++|++..+....+.+++.|++|+|++|.+. .+|..+..++.|++
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~t 434 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHT 434 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHH
Confidence 11345778899999999766666888999999999999999888888899999999999999997 66788999999999
Q ss_pred eecccccccccCCccccCCCCCcEEeCcCccccccC-CccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCC
Q 010663 292 INLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQI-PESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFN 369 (505)
Q Consensus 292 L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n 369 (505)
|...+|++. ..| .+..++.|+.+|++.|+++... |.... -++|++||+++|.-...-...+..+..+...++.-+
T Consensus 435 L~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 435 LRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred HhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 999999998 777 7889999999999999987543 33332 289999999999854344456666666666666655
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=2.1e-22 Score=205.63 Aligned_cols=183 Identities=26% Similarity=0.333 Sum_probs=81.9
Q ss_pred cccEEEeecCCccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEecc
Q 010663 144 SLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLL 223 (505)
Q Consensus 144 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~ 223 (505)
+|+.|++++|.++ .+|.. .++|+.|++++|.+++ +|.. ..+|+.|++++|.+++ +|.. ..+|+.|+++
T Consensus 283 ~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS 350 (788)
T PRK15387 283 GLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVS 350 (788)
T ss_pred hcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecC
Confidence 3444444444444 22321 2344455555554442 2221 1234444444444442 2221 1245555555
Q ss_pred CcccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccC
Q 010663 224 GNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDM 303 (505)
Q Consensus 224 ~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~ 303 (505)
+|+++ .+|.. .++|+.|++++|.++. +|.. ..+|+.|++++|++.+ +|.. .++|+.|++++|+++ .+
T Consensus 351 ~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sI 417 (788)
T PRK15387 351 DNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SL 417 (788)
T ss_pred CCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CC
Confidence 55554 23321 1344455555555543 2321 1345555555555542 2221 234555555555554 23
Q ss_pred CccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccc
Q 010663 304 PATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSM 355 (505)
Q Consensus 304 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l 355 (505)
|.. ..+|+.|++++|+++ .+|..+..+++|+.|++++|++++..|..+
T Consensus 418 P~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 418 PML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred Ccc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 432 234455555555555 455555555555555555555555544443
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=2.7e-22 Score=204.80 Aligned_cols=266 Identities=26% Similarity=0.345 Sum_probs=214.2
Q ss_pred CCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEe
Q 010663 16 STLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLG 95 (505)
Q Consensus 16 ~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~ 95 (505)
..-..|+++.+.++ ++|..+. ++|+.|++.+|+++ .+|. .+++|++|++++|+++. +|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCc-ccCc---ccccceee
Confidence 55678999999999 8999876 48999999999998 5675 36899999999999995 4542 47899999
Q ss_pred ccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEcc
Q 010663 96 LAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLE 175 (505)
Q Consensus 96 L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 175 (505)
+++|.++..| . ...+|+.|++++|.++ .+|.. +++|+.|++++|.+++ +|.. ...|+.|+++
T Consensus 269 Ls~N~L~~Lp------~---lp~~L~~L~Ls~N~Lt-~LP~~----p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls 330 (788)
T PRK15387 269 IFSNPLTHLP------A---LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLAS-LPAL---PSELCKLWAY 330 (788)
T ss_pred ccCCchhhhh------h---chhhcCEEECcCCccc-ccccc----ccccceeECCCCcccc-CCCC---cccccccccc
Confidence 9999998775 2 1257889999999998 45642 3689999999999984 5543 3468889999
Q ss_pred CCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCceeccCccCCCCC
Q 010663 176 GNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVI 255 (505)
Q Consensus 176 ~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 255 (505)
+|.+++ +|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|.. ..+|+.|++++|.+++ +
T Consensus 331 ~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-L 397 (788)
T PRK15387 331 NNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-L 397 (788)
T ss_pred cCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-C
Confidence 999984 5642 2589999999999985 5543 357889999999998 46653 3579999999999986 4
Q ss_pred CccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCccCc
Q 010663 256 PSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFD 332 (505)
Q Consensus 256 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 332 (505)
|.. .++|+.|++++|.+.+ +|.. ..+|+.|++++|+++ .+|..+..+++|+.|+|++|++++..+..+.
T Consensus 398 P~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 398 PVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred CCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHH
Confidence 433 3689999999999985 4543 357888999999998 7899999999999999999999988777653
No 15
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=2.8e-24 Score=193.74 Aligned_cols=268 Identities=22% Similarity=0.263 Sum_probs=161.5
Q ss_pred EEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccC-c
Q 010663 21 IILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAY-N 99 (505)
Q Consensus 21 L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~-n 99 (505)
.+-++..++ ++|..+- +.-..++|..|.|+..-+.+|+.+++|+.|||++|.|+.+-|++|.+++.|..|.+.+ |
T Consensus 51 VdCr~~GL~-eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred EEccCCCcc-cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 344455566 7777653 4667788888888755556788888888888888888888888888888877776655 7
Q ss_pred cccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccCCcc
Q 010663 100 NLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKL 179 (505)
Q Consensus 100 ~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 179 (505)
+|+.+|. ..|..+..|+.|.+.-|++.-.....+..+ ++|..|.+.+|.+...--..|..+..++.+.+..|.+
T Consensus 127 kI~~l~k-----~~F~gL~slqrLllNan~i~Cir~~al~dL-~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ 200 (498)
T KOG4237|consen 127 KITDLPK-----GAFGGLSSLQRLLLNANHINCIRQDALRDL-PSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPF 200 (498)
T ss_pred chhhhhh-----hHhhhHHHHHHHhcChhhhcchhHHHHHHh-hhcchhcccchhhhhhccccccchhccchHhhhcCcc
Confidence 8887764 567788888888888888776667777777 6788888888877733334677777777777776652
Q ss_pred c------------cccCccccCCCCCCeEeccC-------------------------ccccccCC-ccCCCCCCCCeEe
Q 010663 180 T------------GPIPTTFGRLQKLQGLFLAF-------------------------NKLVGSCP-DELCHLDRLDKLV 221 (505)
Q Consensus 180 ~------------~~~~~~l~~l~~L~~L~l~~-------------------------n~~~~~~~-~~~~~~~~L~~L~ 221 (505)
. ...|..++......-..+.+ +...+..| ..|..+++|++|+
T Consensus 201 icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ln 280 (498)
T KOG4237|consen 201 ICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLN 280 (498)
T ss_pred ccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEec
Confidence 1 01111111111111111111 11111111 1234455555555
Q ss_pred ccCcccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeeccccc
Q 010663 222 LLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENN 298 (505)
Q Consensus 222 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 298 (505)
+++|++++.-+.+|.....++.|.|..|++...-...|.++..|+.|+|.+|+++...|..|..+..|.+|++-.|.
T Consensus 281 lsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 281 LSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred cCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCc
Confidence 55555555555555555555555555555554444555555555555555555555555555555555555555443
No 16
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=6.2e-21 Score=196.15 Aligned_cols=246 Identities=25% Similarity=0.385 Sum_probs=112.8
Q ss_pred CCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEec
Q 010663 17 TLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGL 96 (505)
Q Consensus 17 ~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L 96 (505)
+...|+++++.++ .+|..+. ++|+.|++++|.++ .+|..+. .+|++|++++|.++ .+|..+. .+|+.|+|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP---EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc---cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 3455666666665 5555442 35666666666665 4454432 35566666665555 2343332 24555555
Q ss_pred cCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccC
Q 010663 97 AYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEG 176 (505)
Q Consensus 97 ~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 176 (505)
++|.+..+|. .+. .+|+.|++++|.+. .+|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++
T Consensus 249 s~N~L~~LP~------~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 249 SINRITELPE------RLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQS 313 (754)
T ss_pred cCCccCcCCh------hHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCccc-cCcccch--hhHHHHHhcC
Confidence 5555554431 111 24555555555554 3343321 24555555555544 2333221 2344444554
Q ss_pred CccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCceeccCccCCCCCC
Q 010663 177 NKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIP 256 (505)
Q Consensus 177 n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 256 (505)
|.++. +|..+ .+ +|+.|++++|.+++ +|..+. ++|+.|++++|+++. +|
T Consensus 314 N~Lt~-LP~~l--~~------------------------sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP 362 (754)
T PRK15370 314 NSLTA-LPETL--PP------------------------GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LP 362 (754)
T ss_pred Ccccc-CCccc--cc------------------------cceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CC
Confidence 44442 23222 13 44444444444442 333221 345555555555442 33
Q ss_pred ccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCccc----cCCCCCcEEeCcCcccc
Q 010663 257 STFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATI----GGLKSLQIMDLAYNRLE 324 (505)
Q Consensus 257 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~----~~l~~L~~L~l~~n~l~ 324 (505)
..+. ++|+.|++++|.+.. +|..+. ..|+.|++++|++. .+|..+ ..++.+..|++.+|++.
T Consensus 363 ~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 363 ETLP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhhc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 3221 345555555555542 222222 23555555555554 333322 23345555666665554
No 17
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.82 E-value=2.1e-22 Score=181.63 Aligned_cols=286 Identities=25% Similarity=0.272 Sum_probs=134.7
Q ss_pred CEEEccCCcCCccCcccccCCCCCCEEeccCccccCC-CCCcccccccCCCCCCCEEECcC-CCCCccCchHHhhccccc
Q 010663 68 TLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSS-TSKLSFLSSLANCKKLRSLNFIG-NPLDGFLPSSIGNLSKSL 145 (505)
Q Consensus 68 ~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~~~l~~l~~L~~L~l~~-n~~~~~~~~~~~~l~~~L 145 (505)
..++|..|+|+.+.|.+|+.+++|+.|||++|.|+.+ | .+|..++.|..|-+.+ |+|+..--..|..+ ..|
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p------~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL-~sl 142 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAP------DAFKGLASLLSLVLYGNNKITDLPKGAFGGL-SSL 142 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcCh------HhhhhhHhhhHHHhhcCCchhhhhhhHhhhH-HHH
Confidence 4455555555555555555555555555555555555 3 4455555554444443 44442222223333 445
Q ss_pred cEEEeecCCccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCc
Q 010663 146 ETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGN 225 (505)
Q Consensus 146 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n 225 (505)
+.|.+..|++.-...+.|..+++|..|.+..|.+...--..|..+..++.+++..|.+.. .++++.+..
T Consensus 143 qrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla~------ 211 (498)
T KOG4237|consen 143 QRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLAD------ 211 (498)
T ss_pred HHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhhh------
Confidence 555555555544444455555555555555555442222245555555555555444221 111111111
Q ss_pred ccccccCccccCCCCCCceeccCccCCCCCCccccC-CCCCCEEEccCCccccccc-cccccccCCCeeecccccccccC
Q 010663 226 KFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWR-LKDILFLDFSSNLLVGTLS-FDIGNLKVLLGINLSENNLSGDM 303 (505)
Q Consensus 226 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~~~~~~ 303 (505)
.....|..++.........+.+.++..+.+..|.. +.++..--.+.+...+..| ..|..+++|++|+|++|++++.-
T Consensus 212 -~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~ 290 (498)
T KOG4237|consen 212 -DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIE 290 (498)
T ss_pred -HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhh
Confidence 00112222333333333333333333222222211 1111111111222222222 23555666666666666666666
Q ss_pred CccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCcCc
Q 010663 304 PATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNELE 372 (505)
Q Consensus 304 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~l~ 372 (505)
+.+|....++++|.|..|++...-...|.++..|+.|+|.+|+++...|..|..+.+|..+++-.|++.
T Consensus 291 ~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 291 DGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 666666666666666666665444455666666666666666666666666666666666666666553
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=6.8e-20 Score=188.54 Aligned_cols=246 Identities=25% Similarity=0.364 Sum_probs=126.5
Q ss_pred CCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccc
Q 010663 66 KLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSL 145 (505)
Q Consensus 66 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L 145 (505)
+...|+++++.++. +|..+. ++|+.|+|++|.++..|. .+. ++|++|++++|.++ .+|..+. .+|
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~LtsLP~------~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L 243 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELKSLPE------NLQ--GNIKTLYANSNQLT-SIPATLP---DTI 243 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCcCCh------hhc--cCCCEEECCCCccc-cCChhhh---ccc
Confidence 45566666666653 444332 356666666666665542 121 35666666666665 4454332 356
Q ss_pred cEEEeecCCccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCc
Q 010663 146 ETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGN 225 (505)
Q Consensus 146 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n 225 (505)
+.|+|++|.+. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|.++. +|..+. ++|+.|++++|
T Consensus 244 ~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N 314 (754)
T PRK15370 244 QEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSN 314 (754)
T ss_pred cEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCC
Confidence 66666666665 4454443 35666666666665 3454332 356666666666553 333221 34556666666
Q ss_pred ccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeecccccccccCCc
Q 010663 226 KFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPA 305 (505)
Q Consensus 226 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~ 305 (505)
.++ .+|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+ .+.|+.|++++|+++ .+|.
T Consensus 315 ~Lt-~LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~ 384 (754)
T PRK15370 315 SLT-ALPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPE 384 (754)
T ss_pred ccc-cCCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCH
Confidence 655 233322 2456666666665554 333332 45566666666554 233322 245555555555555 3443
Q ss_pred cccCCCCCcEEeCcCccccccCCccC----cCCCCCCEEECcCCcCc
Q 010663 306 TIGGLKSLQIMDLAYNRLEGQIPESF----DDLTSLEVMNLSNNKIS 348 (505)
Q Consensus 306 ~~~~l~~L~~L~l~~n~l~~~~~~~~----~~l~~L~~L~l~~n~l~ 348 (505)
.+. ..|+.|++++|++. .+|..+ ..++.+..|++.+|.++
T Consensus 385 ~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 385 NLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 332 24555555555555 333322 22345555555555554
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=1.2e-20 Score=180.76 Aligned_cols=209 Identities=25% Similarity=0.283 Sum_probs=94.8
Q ss_pred EEEcccccccc-cCchhhhcCCCCCCEEeccCCcccc----cCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEE
Q 010663 20 IIILINNSLSG-SLPSRIGLSLPTVEHLNLALNRFSG----TIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWL 94 (505)
Q Consensus 20 ~L~ls~n~~~~-~ip~~~~~~l~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L 94 (505)
.|+|..+.+++ ..+..+. .+.+|+.|+++++.++. .++..+...++|++++++++.+.+ .+..
T Consensus 2 ~l~L~~~~l~~~~~~~~~~-~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~---------- 69 (319)
T cd00116 2 QLSLKGELLKTERATELLP-KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRG---------- 69 (319)
T ss_pred ccccccCcccccchHHHHH-HHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchH----------
Confidence 35566666653 2333233 45666777776666632 234444555556666666554431 0000
Q ss_pred eccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccc--cccEEEeecCCccc----cCCccccCC-C
Q 010663 95 GLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSK--SLETLGIANCSISG----NIPPAISNL-S 167 (505)
Q Consensus 95 ~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~--~L~~L~l~~n~l~~----~~~~~~~~l-~ 167 (505)
.......+..+++|+.|++++|.+.+..+..+..+.. +|++|++++|.+.+ .+...+..+ +
T Consensus 70 ------------~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~ 137 (319)
T cd00116 70 ------------LQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPP 137 (319)
T ss_pred ------------HHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCC
Confidence 0000123344555555555555555444444443311 15555555555442 112223334 5
Q ss_pred CCCEEEccCCccccc----cCccccCCCCCCeEeccCcccccc----CCccCCCCCCCCeEeccCcccccc----cCccc
Q 010663 168 NLLTLVLEGNKLTGP----IPTTFGRLQKLQGLFLAFNKLVGS----CPDELCHLDRLDKLVLLGNKFSGS----IPSCL 235 (505)
Q Consensus 168 ~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~l~~~----~~~~~ 235 (505)
+|+.|++++|.+++. ++..+..+++|++|++++|.+.+. ++..+..+++|+.|++++|.+.+. +...+
T Consensus 138 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~ 217 (319)
T cd00116 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETL 217 (319)
T ss_pred CceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHh
Confidence 566666666655521 222344445555555555555421 112223334555555555544321 22223
Q ss_pred cCCCCCCceeccCccCC
Q 010663 236 SNLTSLRFLYLGSNRFT 252 (505)
Q Consensus 236 ~~l~~L~~L~l~~n~~~ 252 (505)
..+++|+.|++++|.++
T Consensus 218 ~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 218 ASLKSLEVLNLGDNNLT 234 (319)
T ss_pred cccCCCCEEecCCCcCc
Confidence 33444555555544444
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=6.6e-21 Score=182.46 Aligned_cols=280 Identities=23% Similarity=0.238 Sum_probs=128.4
Q ss_pred EEEccCCcCC-ccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCc------cCchHHhhc
Q 010663 69 LLELGGNTFS-GLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDG------FLPSSIGNL 141 (505)
Q Consensus 69 ~L~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~------~~~~~~~~l 141 (505)
.|+|..+.++ ......+..+..|++|+++++.++... ...+...+...++|++++++++.+.+ .++..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~-~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEA-AKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHH-HHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 3556666655 223444555666777777777664321 00111344555666677776665542 112223332
Q ss_pred cccccEEEeecCCccccCCccccCCCC---CCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCC-CCC
Q 010663 142 SKSLETLGIANCSISGNIPPAISNLSN---LLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHL-DRL 217 (505)
Q Consensus 142 ~~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~-~~L 217 (505)
++|+.|++++|.+....+..+..+.. |++|++++|.+++... ..+...+..+ ++|
T Consensus 81 -~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~--------------------~~l~~~l~~~~~~L 139 (319)
T cd00116 81 -CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL--------------------RLLAKGLKDLPPAL 139 (319)
T ss_pred -CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH--------------------HHHHHHHHhCCCCc
Confidence 35555555555554333333333332 5555555544431000 0111122223 344
Q ss_pred CeEeccCccccc----ccCccccCCCCCCceeccCccCCCC----CCccccCCCCCCEEEccCCccccc----ccccccc
Q 010663 218 DKLVLLGNKFSG----SIPSCLSNLTSLRFLYLGSNRFTSV----IPSTFWRLKDILFLDFSSNLLVGT----LSFDIGN 285 (505)
Q Consensus 218 ~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~ 285 (505)
+.|++++|.+++ .++..+..+++|+.|++++|.+++. ++..+...++|+.|++++|.+.+. +...+..
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~ 219 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLAS 219 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcc
Confidence 444444444442 1122233344455555555544421 112223334555555555544322 1222334
Q ss_pred ccCCCeeecccccccccCCcccc-----CCCCCcEEeCcCccccc----cCCccCcCCCCCCEEECcCCcCccc----CC
Q 010663 286 LKVLLGINLSENNLSGDMPATIG-----GLKSLQIMDLAYNRLEG----QIPESFDDLTSLEVMNLSNNKISGS----IP 352 (505)
Q Consensus 286 ~~~L~~L~l~~n~~~~~~~~~~~-----~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~----~p 352 (505)
+++|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+++++++|.+... +.
T Consensus 220 ~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~ 299 (319)
T cd00116 220 LKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLA 299 (319)
T ss_pred cCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHH
Confidence 45556666665555432221111 13566667776666651 2233444556677777777766633 33
Q ss_pred ccccCC-CCCCEEeCcCCc
Q 010663 353 KSMEKL-FYLRELNLSFNE 370 (505)
Q Consensus 353 ~~l~~l-~~L~~l~l~~n~ 370 (505)
..+... +.|+.+++.+|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 300 ESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHhhcCCchhhcccCCCC
Confidence 333333 566666666664
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=1.4e-20 Score=150.71 Aligned_cols=163 Identities=26% Similarity=0.476 Sum_probs=123.9
Q ss_pred CCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCC
Q 010663 39 SLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCK 118 (505)
Q Consensus 39 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~ 118 (505)
++.+++.|.|+.|+++ .+|..+..+.+|+.|++++|++. .+|..++.+++|+.|+++-|++...| ..|+.+|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lp------rgfgs~p 102 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILP------RGFGSFP 102 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCc------cccCCCc
Confidence 5677777777777776 66777777777777777777777 56667777777888777777777666 6777778
Q ss_pred CCCEEECcCCCCC-ccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCeEe
Q 010663 119 KLRSLNFIGNPLD-GFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLF 197 (505)
Q Consensus 119 ~L~~L~l~~n~~~-~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~ 197 (505)
.|+.||+.+|++. ..+|..|+.+ ..|+.|+|++|.+. .+|..++.+++||.|.+..|.+. .+|..++.+..|++|+
T Consensus 103 ~levldltynnl~e~~lpgnff~m-~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelh 179 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYM-TTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELH 179 (264)
T ss_pred hhhhhhccccccccccCCcchhHH-HHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHh
Confidence 8888888877765 3567777776 67888888888887 77888888888888888888877 6788888888888888
Q ss_pred ccCccccccCCccCCC
Q 010663 198 LAFNKLVGSCPDELCH 213 (505)
Q Consensus 198 l~~n~~~~~~~~~~~~ 213 (505)
+.+|+++ .+|..+++
T Consensus 180 iqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 180 IQGNRLT-VLPPELAN 194 (264)
T ss_pred cccceee-ecChhhhh
Confidence 8888887 44444443
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=4.2e-20 Score=148.06 Aligned_cols=164 Identities=32% Similarity=0.596 Sum_probs=113.2
Q ss_pred hhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCC
Q 010663 12 IFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNL 91 (505)
Q Consensus 12 ~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L 91 (505)
+.+++++..|.+|+|+++ .+|..|. .+.+|+.|++++|++. .+|.++..+++|+.|+++-|.+. ..|..|+.++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia-~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIA-ELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHH-Hhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 334556666777777777 6777776 6777777777777776 66777777777777777777665 567777777777
Q ss_pred CEEeccCccccCC--CCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCC
Q 010663 92 AWLGLAYNNLTSS--TSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNL 169 (505)
Q Consensus 92 ~~L~L~~n~l~~~--~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L 169 (505)
+.|||.+|++... | ..|..+..|+.|+++.|.+. .+|..++++ ++|+.|.+++|.+. .+|..++.++.|
T Consensus 105 evldltynnl~e~~lp------gnff~m~tlralyl~dndfe-~lp~dvg~l-t~lqil~lrdndll-~lpkeig~lt~l 175 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLP------GNFFYMTTLRALYLGDNDFE-ILPPDVGKL-TNLQILSLRDNDLL-SLPKEIGDLTRL 175 (264)
T ss_pred hhhhccccccccccCC------cchhHHHHHHHHHhcCCCcc-cCChhhhhh-cceeEEeeccCchh-hCcHHHHHHHHH
Confidence 7777777776654 3 45556666777777777776 667777776 67777777777765 567777777777
Q ss_pred CEEEccCCccccccCccccC
Q 010663 170 LTLVLEGNKLTGPIPTTFGR 189 (505)
Q Consensus 170 ~~L~l~~n~~~~~~~~~l~~ 189 (505)
++|.+.+|+++ .+|..++.
T Consensus 176 relhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 176 RELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred HHHhcccceee-ecChhhhh
Confidence 77777777776 45554544
No 23
>PLN03150 hypothetical protein; Provisional
Probab=99.54 E-value=2e-14 Score=147.87 Aligned_cols=118 Identities=39% Similarity=0.673 Sum_probs=104.6
Q ss_pred CCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCc
Q 010663 288 VLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLS 367 (505)
Q Consensus 288 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~ 367 (505)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCC--CccCccCcccccCCccCCCCCCCCCCCCC
Q 010663 368 FNELEGEIPSG--GIFANFTAESFMGNELLCGLPNLQVQPCK 407 (505)
Q Consensus 368 ~n~l~~~~p~~--~~~~~~~~~~~~~n~~lc~~~~~~~~~c~ 407 (505)
+|+++|.+|.. ....+.....+.+|+.+|+.|. ...|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 99999999975 2223445678899999999774 45674
No 24
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.37 E-value=2.1e-14 Score=136.36 Aligned_cols=175 Identities=30% Similarity=0.433 Sum_probs=126.8
Q ss_pred cCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCE
Q 010663 14 NMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAW 93 (505)
Q Consensus 14 ~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~ 93 (505)
.+.--...|++.|++. ++|..+. .+..|+.+.|..|.+. .+|..+.++..|.+++|+.|+++ .+|..+..|+ |+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~-~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEAC-AFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHH-HHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3444456677777777 7777777 5777777777777776 77777777778888888877777 4566566655 777
Q ss_pred EeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEE
Q 010663 94 LGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLV 173 (505)
Q Consensus 94 L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 173 (505)
|-+++|+++..| ..++..+.|..||.+.|.+. .+|..++.+ .+|+.|.+..|++. .+|..+.. -.|..||
T Consensus 148 li~sNNkl~~lp------~~ig~~~tl~~ld~s~nei~-slpsql~~l-~slr~l~vrRn~l~-~lp~El~~-LpLi~lD 217 (722)
T KOG0532|consen 148 LIVSNNKLTSLP------EEIGLLPTLAHLDVSKNEIQ-SLPSQLGYL-TSLRDLNVRRNHLE-DLPEELCS-LPLIRLD 217 (722)
T ss_pred EEEecCccccCC------cccccchhHHHhhhhhhhhh-hchHHhhhH-HHHHHHHHhhhhhh-hCCHHHhC-Cceeeee
Confidence 777787777776 45666677777777777776 667777776 57777777777776 56666663 3567777
Q ss_pred ccCCccccccCccccCCCCCCeEeccCcccc
Q 010663 174 LEGNKLTGPIPTTFGRLQKLQGLFLAFNKLV 204 (505)
Q Consensus 174 l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 204 (505)
+++|+++ .+|..|.+|..|++|-|.+|.+.
T Consensus 218 fScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 218 FSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 7777777 67777777777777777777775
No 25
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=2.4e-12 Score=126.84 Aligned_cols=179 Identities=34% Similarity=0.487 Sum_probs=84.3
Q ss_pred CCCCCEEeccCccccCCCCCcccccccCCCC-CCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCC
Q 010663 88 LRNLAWLGLAYNNLTSSTSKLSFLSSLANCK-KLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNL 166 (505)
Q Consensus 88 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~-~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 166 (505)
++.++.|++.+|.++.++ ....... +|+.|++++|.+. .+|..+..+ ++|+.|++++|++. .+|...+..
T Consensus 115 ~~~l~~L~l~~n~i~~i~------~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l-~~L~~L~l~~N~l~-~l~~~~~~~ 185 (394)
T COG4886 115 LTNLTSLDLDNNNITDIP------PLIGLLKSNLKELDLSDNKIE-SLPSPLRNL-PNLKNLDLSFNDLS-DLPKLLSNL 185 (394)
T ss_pred ccceeEEecCCcccccCc------cccccchhhcccccccccchh-hhhhhhhcc-ccccccccCCchhh-hhhhhhhhh
Confidence 344455555555444443 1222221 4555555555444 333333443 44555555555544 333333344
Q ss_pred CCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCceec
Q 010663 167 SNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYL 246 (505)
Q Consensus 167 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 246 (505)
+.|+.|++++|++. .+|........|+++.+++|... ..+..+..+.++..+.+.+|++. ..+..++.+++++.|++
T Consensus 186 ~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~ 262 (394)
T COG4886 186 SNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDL 262 (394)
T ss_pred hhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecc
Confidence 55555555555554 33433333444555555555322 23333444555555555555544 22344555555666666
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccccccc
Q 010663 247 GSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLS 280 (505)
Q Consensus 247 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 280 (505)
++|.++.... +....+++.|++++|.+....+
T Consensus 263 s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 263 SNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred cccccccccc--ccccCccCEEeccCccccccch
Confidence 6665554322 5555566666666665554444
No 26
>PLN03150 hypothetical protein; Provisional
Probab=99.34 E-value=5.7e-12 Score=129.81 Aligned_cols=112 Identities=37% Similarity=0.603 Sum_probs=103.5
Q ss_pred CCEEEccCCccccccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCccCcCCCCCCEEECcC
Q 010663 265 ILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSN 344 (505)
Q Consensus 265 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 344 (505)
++.|+|++|.+.+.+|..+..+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCccccCC-CCCCEEeCcCCcCcccCC
Q 010663 345 NKISGSIPKSMEKL-FYLRELNLSFNELEGEIP 376 (505)
Q Consensus 345 n~l~~~~p~~l~~l-~~L~~l~l~~n~l~~~~p 376 (505)
|+++|.+|..+... .++..+++.+|...+..|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCC
Confidence 99999999988764 467889999998765544
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.33 E-value=2.7e-12 Score=126.45 Aligned_cols=178 Identities=36% Similarity=0.535 Sum_probs=90.8
Q ss_pred cccEEEeecCCccccCCccccCCC-CCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEec
Q 010663 144 SLETLGIANCSISGNIPPAISNLS-NLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVL 222 (505)
Q Consensus 144 ~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l 222 (505)
.++.|++.+|.++ .++....... +|+.|++++|.+. .+|..++.+++|+.|++++|++. .+|......+.|+.|++
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 4555555555554 3344444442 5555555555554 33334555555555555555554 23332334555555555
Q ss_pred cCcccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeeccccccccc
Q 010663 223 LGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGD 302 (505)
Q Consensus 223 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~ 302 (505)
++|+++ .+|........|+++.+++|.+. ..+..+..+..+..+.+.+|++.. .+..+..++++++|++++|.++ .
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~-~ 269 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS-S 269 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceecccccccc-c
Confidence 555555 34443333444555555555322 233444455555555555555532 2344555566666666666665 3
Q ss_pred CCccccCCCCCcEEeCcCccccccCCc
Q 010663 303 MPATIGGLKSLQIMDLAYNRLEGQIPE 329 (505)
Q Consensus 303 ~~~~~~~l~~L~~L~l~~n~l~~~~~~ 329 (505)
++. ++.+.+++.|++++|.+...+|.
T Consensus 270 i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 270 ISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred ccc-ccccCccCEEeccCccccccchh
Confidence 333 55666666666666666644443
No 28
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.32 E-value=7.7e-14 Score=132.58 Aligned_cols=180 Identities=27% Similarity=0.405 Sum_probs=158.7
Q ss_pred ccchhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCccccc
Q 010663 7 MVSATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIG 86 (505)
Q Consensus 7 ~~~~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~ 86 (505)
++|..+..|..|+.+.++.|.+. .||..+. ++..|++|+|+.|+++ .+|..+..|+ |+.|.+++|+++ .+|..++
T Consensus 89 elp~~~~~f~~Le~liLy~n~~r-~ip~~i~-~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig 163 (722)
T KOG0532|consen 89 ELPEEACAFVSLESLILYHNCIR-TIPEAIC-NLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIG 163 (722)
T ss_pred cCchHHHHHHHHHHHHHHhccce-ecchhhh-hhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccc
Confidence 68889999999999999999999 9999999 8999999999999998 8898888776 899999999998 6788899
Q ss_pred CCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCC
Q 010663 87 NLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNL 166 (505)
Q Consensus 87 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 166 (505)
.+..|..|+.+.|.+...| ..++.+..|+.|.+..|++. .+|..++.+ .|..||++.|++. .+|-.|.++
T Consensus 164 ~~~tl~~ld~s~nei~slp------sql~~l~slr~l~vrRn~l~-~lp~El~~L--pLi~lDfScNkis-~iPv~fr~m 233 (722)
T KOG0532|consen 164 LLPTLAHLDVSKNEIQSLP------SQLGYLTSLRDLNVRRNHLE-DLPEELCSL--PLIRLDFSCNKIS-YLPVDFRKM 233 (722)
T ss_pred cchhHHHhhhhhhhhhhch------HHhhhHHHHHHHHHhhhhhh-hCCHHHhCC--ceeeeecccCcee-ecchhhhhh
Confidence 9999999999999999887 67899999999999999998 788888876 5999999999998 899999999
Q ss_pred CCCCEEEccCCccccccCccccCCCC---CCeEeccCcc
Q 010663 167 SNLLTLVLEGNKLTGPIPTTFGRLQK---LQGLFLAFNK 202 (505)
Q Consensus 167 ~~L~~L~l~~n~~~~~~~~~l~~l~~---L~~L~l~~n~ 202 (505)
+.|++|.|.+|.+. ..|..+..... .++|+...++
T Consensus 234 ~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 234 RHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred hhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 99999999999998 56666654333 4566666663
No 29
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.23 E-value=1.1e-11 Score=130.38 Aligned_cols=273 Identities=19% Similarity=0.209 Sum_probs=160.3
Q ss_pred cCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCc--ccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCC
Q 010663 14 NMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNR--FSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNL 91 (505)
Q Consensus 14 ~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~--~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L 91 (505)
+....+...+-+|.+. .++... .+++|++|-+.+|. +.......|..++.|++|||++|.--+.+|..++.+.+|
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~--~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSS--ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred chhheeEEEEeccchh-hccCCC--CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 3456777777788776 667665 46688888888885 443334457778888888888876666788888888888
Q ss_pred CEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCc--cccCCccccCCCCC
Q 010663 92 AWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSI--SGNIPPAISNLSNL 169 (505)
Q Consensus 92 ~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l--~~~~~~~~~~l~~L 169 (505)
|+|+++++.+...| ..+.++..|.+|++..+.....+|.....+ .+|++|.+..... +...-..+.++.+|
T Consensus 598 ryL~L~~t~I~~LP------~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L-~~Lr~L~l~~s~~~~~~~~l~el~~Le~L 670 (889)
T KOG4658|consen 598 RYLDLSDTGISHLP------SGLGNLKKLIYLNLEVTGRLESIPGILLEL-QSLRVLRLPRSALSNDKLLLKELENLEHL 670 (889)
T ss_pred hcccccCCCccccc------hHHHHHHhhheeccccccccccccchhhhc-ccccEEEeeccccccchhhHHhhhcccch
Confidence 88888888888777 678888888888888876555556555556 6788888876542 22222344455555
Q ss_pred CEEEccCCccccccCccccCCCCCC----eEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccC------CC
Q 010663 170 LTLVLEGNKLTGPIPTTFGRLQKLQ----GLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSN------LT 239 (505)
Q Consensus 170 ~~L~l~~n~~~~~~~~~l~~l~~L~----~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------l~ 239 (505)
+.+....... .+-..+..+..|. .+.+..+... ..+..+..+.+|+.|.+.++..+......... ++
T Consensus 671 ~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~ 747 (889)
T KOG4658|consen 671 ENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFP 747 (889)
T ss_pred hhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHH
Confidence 5555533332 1111222333333 2222222221 33445667777888888777765332222111 12
Q ss_pred CCCceeccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeeccccccc
Q 010663 240 SLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLS 300 (505)
Q Consensus 240 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~ 300 (505)
++..+...++... ..+.+....++|+.|.+..+.....+......+..+..+.+..+.+.
T Consensus 748 ~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 748 NLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred HHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 2222222222211 12233334567777777776665555544444444544444444443
No 30
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.21 E-value=1.4e-11 Score=103.84 Aligned_cols=132 Identities=28% Similarity=0.340 Sum_probs=48.8
Q ss_pred hhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCC
Q 010663 11 TIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRN 90 (505)
Q Consensus 11 ~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~ 90 (505)
.+.++.+++.|+|.+|.++ .|. .++..+.+|+.|++++|.++. + +.+..+++|++|++++|.++...+.....+++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT
T ss_pred ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCccccchHHhCCc
Confidence 3556777899999999887 554 444357889999999999873 3 35778899999999999998643322246889
Q ss_pred CCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCc---hHHhhccccccEEEee
Q 010663 91 LAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLP---SSIGNLSKSLETLGIA 151 (505)
Q Consensus 91 L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~---~~~~~l~~~L~~L~l~ 151 (505)
|++|++++|++....+ +..+..+++|++|++.+|++...-- ..+..+ ++|+.||-.
T Consensus 90 L~~L~L~~N~I~~l~~----l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~l-P~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNE----LEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKL-PSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCC----CGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH--TT-SEETTE
T ss_pred CCEEECcCCcCCChHH----hHHHHcCCCcceeeccCCcccchhhHHHHHHHHc-ChhheeCCE
Confidence 9999999998877632 2567788899999999988763311 113333 566666543
No 31
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.18 E-value=1.6e-12 Score=116.75 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=116.0
Q ss_pred CCCCCCEEeccCCcccc----cCchhhhCCCCCCEEEccCCcCCc----cCcc-------cccCCCCCCEEeccCccccC
Q 010663 39 SLPTVEHLNLALNRFSG----TIPSSITNASKLTLLELGGNTFSG----LIPD-------TIGNLRNLAWLGLAYNNLTS 103 (505)
Q Consensus 39 ~l~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~n~~~~----~~~~-------~l~~l~~L~~L~L~~n~l~~ 103 (505)
.+..++.++|++|.+.. .+...+.+.++|+..++++- ++| .+|. .+..+++|+.|+||+|-+..
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 35566666666666632 23344555566666666532 222 2222 22344455555555554432
Q ss_pred C-CCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccCCcccc-
Q 010663 104 S-TSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTG- 181 (505)
Q Consensus 104 ~-~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~- 181 (505)
. +..+ -.-+.++..|++|.|.+|.+...-...++. .|.+|. .+ .....-+.|+++....|++..
T Consensus 107 ~g~~~l--~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~---al~~l~--~~-------kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 107 KGIRGL--EELLSSCTDLEELYLNNCGLGPEAGGRLGR---ALFELA--VN-------KKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cchHHH--HHHHHhccCHHHHhhhcCCCChhHHHHHHH---HHHHHH--HH-------hccCCCcceEEEEeeccccccc
Confidence 2 1100 022344555555555555544211111111 122222 11 122334566777776666542
Q ss_pred ---ccCccccCCCCCCeEeccCcccccc----CCccCCCCCCCCeEeccCccccc----ccCccccCCCCCCceeccCcc
Q 010663 182 ---PIPTTFGRLQKLQGLFLAFNKLVGS----CPDELCHLDRLDKLVLLGNKFSG----SIPSCLSNLTSLRFLYLGSNR 250 (505)
Q Consensus 182 ---~~~~~l~~l~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~ 250 (505)
.+...|...+.|+.+.++.|.+... ....+.++++|+.|+|..|.++. .+...+..+++|+.|++++|.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 1223455566666666666665321 22344556666666666665542 122334444555555555555
Q ss_pred CCCCCCccccCCCCCCEEEccCCcccccccccc-ccccCCCeeeccccccccc----CCccccCCCCCcEEeCcCccc
Q 010663 251 FTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDI-GNLKVLLGINLSENNLSGD----MPATIGGLKSLQIMDLAYNRL 323 (505)
Q Consensus 251 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~~~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l 323 (505)
+...-...+.. .+ ...+.|+.|.+.+|.++.. +...+...+.|..|+|++|++
T Consensus 253 l~~~Ga~a~~~--------------------al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 253 LENEGAIAFVD--------------------ALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccHHHHHH--------------------HHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 54332222210 00 1234555555555555421 222334456677777777776
No 32
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=3e-12 Score=118.20 Aligned_cols=110 Identities=21% Similarity=0.238 Sum_probs=49.6
Q ss_pred CCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccC--ccccCCCCCCceeccCccCCCC-CCcc-----ccC
Q 010663 190 LQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIP--SCLSNLTSLRFLYLGSNRFTSV-IPST-----FWR 261 (505)
Q Consensus 190 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n~~~~~-~~~~-----~~~ 261 (505)
+|+|+.|+|+.|...........-+..|++|+|++|++-. .+ ...+.++.|+.|+++.+.+... .|+. ...
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~ 299 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHT 299 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcc
Confidence 4444444444443221222222233444455555544431 11 2234455555555555554432 1111 234
Q ss_pred CCCCCEEEccCCcccccc-ccccccccCCCeeeccccccc
Q 010663 262 LKDILFLDFSSNLLVGTL-SFDIGNLKVLLGINLSENNLS 300 (505)
Q Consensus 262 ~~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~~~ 300 (505)
+++|++|++..|++.... -..+..+++|+.|.+..|.++
T Consensus 300 f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 300 FPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 566677777766664211 112344556666666666664
No 33
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=7.8e-12 Score=115.52 Aligned_cols=211 Identities=23% Similarity=0.225 Sum_probs=95.4
Q ss_pred CCCCCCEEEccCCcCCccCc-ccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhc
Q 010663 63 NASKLTLLELGGNTFSGLIP-DTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNL 141 (505)
Q Consensus 63 ~l~~L~~L~l~~n~~~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l 141 (505)
++.+|+...|.++.+..... .....|++++.|||+.|-+...... ..-...+|+|+.|+++.|.+.....+.....
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v---~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPV---LKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHH---HHHHHhcccchhcccccccccCCccccchhh
Confidence 34445555554444332111 1233455555555555544433111 1222344555555555554443222222222
Q ss_pred cccccEEEeecCCcccc-CCccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccC-CccCCCCCCCCe
Q 010663 142 SKSLETLGIANCSISGN-IPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSC-PDELCHLDRLDK 219 (505)
Q Consensus 142 ~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~~~~~L~~ 219 (505)
.++|+.|.|+.|.++.. +...+..+++|+.|++..|...........-+..|+.|+|++|++.... -...+.++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 24555555555555421 1122334555555555555322122222334455566666655554221 123445556666
Q ss_pred EeccCcccccc-cCcc-----ccCCCCCCceeccCccCCCCC-CccccCCCCCCEEEccCCccc
Q 010663 220 LVLLGNKFSGS-IPSC-----LSNLTSLRFLYLGSNRFTSVI-PSTFWRLKDILFLDFSSNLLV 276 (505)
Q Consensus 220 L~l~~n~l~~~-~~~~-----~~~l~~L~~L~l~~n~~~~~~-~~~~~~~~~L~~L~l~~n~l~ 276 (505)
|.++.+.+... .|+. ...+++|+.|++..|++.... -..+..+++|+.|.+..|.+.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 66665555431 2222 244566667777666664321 123344556666666666654
No 34
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=4.9e-12 Score=111.19 Aligned_cols=131 Identities=27% Similarity=0.362 Sum_probs=70.1
Q ss_pred CCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCCcee
Q 010663 166 LSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLY 245 (505)
Q Consensus 166 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 245 (505)
.+.|+++||++|.++ .+.++..-.|.++.|++++|.+... +.++.+++|+.||+++|.++ .+..+-.++.+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 344555555555555 3344444555555555555555422 22445555555555555554 2223333344444555
Q ss_pred ccCccCCCCCCccccCCCCCCEEEccCCccccccccccccccCCCeeeccccccccc-CCccccCCCCCcEEeCcCcccc
Q 010663 246 LGSNRFTSVIPSTFWRLKDILFLDFSSNLLVGTLSFDIGNLKVLLGINLSENNLSGD-MPATIGGLKSLQIMDLAYNRLE 324 (505)
Q Consensus 246 l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~l~~n~l~ 324 (505)
++.|.+... ..+..+-+|..||+++|+|... -...+++++.|+.+.|.+|++.
T Consensus 359 La~N~iE~L--------------------------SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIETL--------------------------SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhhh--------------------------hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 554443321 1234455566666666666422 2235788888999999999887
Q ss_pred cc
Q 010663 325 GQ 326 (505)
Q Consensus 325 ~~ 326 (505)
+.
T Consensus 413 ~~ 414 (490)
T KOG1259|consen 413 GS 414 (490)
T ss_pred cc
Confidence 43
No 35
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=1.1e-11 Score=111.47 Aligned_cols=240 Identities=21% Similarity=0.236 Sum_probs=139.3
Q ss_pred hhhhcCCCCcEEEcccccccccCc----hhhhcCCCCCCEEeccCCc---ccccCc-------hhhhCCCCCCEEEccCC
Q 010663 10 ATIFNMSTLKIIILINNSLSGSLP----SRIGLSLPTVEHLNLALNR---FSGTIP-------SSITNASKLTLLELGGN 75 (505)
Q Consensus 10 ~~~~~l~~L~~L~ls~n~~~~~ip----~~~~~~l~~L~~L~l~~n~---~~~~~~-------~~~~~l~~L~~L~l~~n 75 (505)
+.+..+..+..|+||+|.+..+-. ..+. .-++|+..++++-. ....+| ..+..+++|++|+||+|
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~-~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDN 102 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLA-SKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDN 102 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHh-hcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccc
Confidence 456678899999999999864333 3344 55778888887642 222344 34566789999999999
Q ss_pred cCCccCccc----ccCCCCCCEEeccCccccCCCC-C-------cccccccCCCCCCCEEECcCCCCCccCch----HHh
Q 010663 76 TFSGLIPDT----IGNLRNLAWLGLAYNNLTSSTS-K-------LSFLSSLANCKKLRSLNFIGNPLDGFLPS----SIG 139 (505)
Q Consensus 76 ~~~~~~~~~----l~~l~~L~~L~L~~n~l~~~~~-~-------~~~~~~l~~l~~L~~L~l~~n~~~~~~~~----~~~ 139 (505)
.+....+.. +.++..|++|+|.+|.+..... . +........-+.|+++...+|++...-.. .+.
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~ 182 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQ 182 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHH
Confidence 887554444 4578999999999998764410 0 00112345567888888888877533222 222
Q ss_pred hccccccEEEeecCCccc----cCCccccCCCCCCEEEccCCccccc----cCccccCCCCCCeEeccCccccccCCccC
Q 010663 140 NLSKSLETLGIANCSISG----NIPPAISNLSNLLTLVLEGNKLTGP----IPTTFGRLQKLQGLFLAFNKLVGSCPDEL 211 (505)
Q Consensus 140 ~l~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~~~~~~~~~~ 211 (505)
.. +.|+.+.+..|.+.. .+...+..+++|++|||..|.++.. +...+..+++|++|++++|.+...-...+
T Consensus 183 ~~-~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~ 261 (382)
T KOG1909|consen 183 SH-PTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAF 261 (382)
T ss_pred hc-cccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHH
Confidence 22 567777777776542 1223455677777777777766522 22334455566666666665543211111
Q ss_pred -----CCCCCCCeEeccCccccc----ccCccccCCCCCCceeccCccC
Q 010663 212 -----CHLDRLDKLVLLGNKFSG----SIPSCLSNLTSLRFLYLGSNRF 251 (505)
Q Consensus 212 -----~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~~ 251 (505)
...|+|+.|.+.+|.++. .+...+...+.|..|+++.|.+
T Consensus 262 ~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 262 VDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 123455555555555442 1111223344445555555544
No 36
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.13 E-value=4.5e-11 Score=125.87 Aligned_cols=251 Identities=25% Similarity=0.284 Sum_probs=125.9
Q ss_pred cCCCCcEEEccccc--ccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCC
Q 010663 14 NMSTLKIIILINNS--LSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNL 91 (505)
Q Consensus 14 ~l~~L~~L~ls~n~--~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L 91 (505)
+++.|++|-+..|. +. .++..++..++.|++|||++|.--+.+|+.++++-+||+|+++++.++ .+|..+++++.|
T Consensus 543 ~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L 620 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKL 620 (889)
T ss_pred CCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhh
Confidence 34466677666665 33 555555545777777777766555567777777777777777777666 566667777777
Q ss_pred CEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCC--CccCchHHhhccccccEEEeecCCccccCCccccCCCCC
Q 010663 92 AWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPL--DGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNL 169 (505)
Q Consensus 92 ~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~--~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L 169 (505)
.+|++..+.-...+. ..+..+++|++|.+..... +...-..+..+ .+|+.+....... .+-..+..++.|
T Consensus 621 ~~Lnl~~~~~l~~~~-----~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~L-e~L~~ls~~~~s~--~~~e~l~~~~~L 692 (889)
T KOG4658|consen 621 IYLNLEVTGRLESIP-----GILLELQSLRVLRLPRSALSNDKLLLKELENL-EHLENLSITISSV--LLLEDLLGMTRL 692 (889)
T ss_pred heecccccccccccc-----chhhhcccccEEEeeccccccchhhHHhhhcc-cchhhheeecchh--HhHhhhhhhHHH
Confidence 777776654332211 3344466677766655431 11122222222 3344443322221 001111122222
Q ss_pred C----EEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCC------CCCCCeEeccCcccccccCccccCCC
Q 010663 170 L----TLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCH------LDRLDKLVLLGNKFSGSIPSCLSNLT 239 (505)
Q Consensus 170 ~----~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~------~~~L~~L~l~~n~l~~~~~~~~~~l~ 239 (505)
. .+.+.++... ..+..+..+.+|+.|.+.++.+.......... ++++..+.+.++... ..+.+.-..+
T Consensus 693 ~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~ 770 (889)
T KOG4658|consen 693 RSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAP 770 (889)
T ss_pred HHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccC
Confidence 2 2222222222 33445666777777777776664332222111 223333333333222 2223333457
Q ss_pred CCCceeccCccCCCCCCccccCCCCCCEEEccCCccc
Q 010663 240 SLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLV 276 (505)
Q Consensus 240 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~ 276 (505)
+|+.|.+..+.....+......+..+..+.+..+.+.
T Consensus 771 ~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 771 HLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred cccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 8888888877766555555555555554444444333
No 37
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=1.3e-10 Score=97.94 Aligned_cols=125 Identities=28% Similarity=0.372 Sum_probs=36.3
Q ss_pred CCCCCCEEEccCCcCCccCccccc-CCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhc
Q 010663 63 NASKLTLLELGGNTFSGLIPDTIG-NLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNL 141 (505)
Q Consensus 63 ~l~~L~~L~l~~n~~~~~~~~~l~-~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l 141 (505)
+..++++|+|++|.|+.+ +.++ .+.+|+.|++++|.++.+ ..+..++.|++|++++|.++. +...+...
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-------~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~ 86 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-------EGLPGLPRLKTLDLSNNRISS-ISEGLDKN 86 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---------TT----TT--EEE--SS---S--CHHHHHH
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-------cCccChhhhhhcccCCCCCCc-cccchHHh
Confidence 444556666666665532 1233 355666666666666655 235556666666666666663 33333321
Q ss_pred cccccEEEeecCCcccc-CCccccCCCCCCEEEccCCccccccCc----cccCCCCCCeEec
Q 010663 142 SKSLETLGIANCSISGN-IPPAISNLSNLLTLVLEGNKLTGPIPT----TFGRLQKLQGLFL 198 (505)
Q Consensus 142 ~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~~~~~~~~----~l~~l~~L~~L~l 198 (505)
.++|++|++++|++... .-..+..+++|++|++.+|.++.. +. .+..+|+|+.||-
T Consensus 87 lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 87 LPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 25666666666666431 113455666777777777766522 21 2345566666654
No 38
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.08 E-value=2.2e-11 Score=107.19 Aligned_cols=230 Identities=19% Similarity=0.179 Sum_probs=147.0
Q ss_pred hhhcCCCCcEEEccccc--------ccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCc
Q 010663 11 TIFNMSTLKIIILINNS--------LSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIP 82 (505)
Q Consensus 11 ~~~~l~~L~~L~ls~n~--------~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 82 (505)
.+.=|..|.+|..+... ...-+|..+. .+++|..+.++.+.-. .+.+....-+.|+++..++..++.. |
T Consensus 177 ildf~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~-~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~~-~ 253 (490)
T KOG1259|consen 177 VLDFCTQLVALVVTPVKDPIDRSNIIPNRLSFNLN-AFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQDV-P 253 (490)
T ss_pred HHHhhhheeEEEecCCCCCCccccccccccccchH-Hhhhhheeeeeccchh-heeceeecCchhheeeeeccccccc-c
Confidence 34456778888776532 1223444454 4678888888877543 2333333446788888877665532 2
Q ss_pred ccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCcc
Q 010663 83 DTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPA 162 (505)
Q Consensus 83 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 162 (505)
. +--...+.......-....-+ ....+.....|+++||++|.++ .+.++..-. +.++.|++++|.+.. + ..
T Consensus 254 ~-l~pe~~~~D~~~~E~~t~~G~----~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~-Pkir~L~lS~N~i~~-v-~n 324 (490)
T KOG1259|consen 254 S-LLPETILADPSGSEPSTSNGS----ALVSADTWQELTELDLSGNLIT-QIDESVKLA-PKLRRLILSQNRIRT-V-QN 324 (490)
T ss_pred c-ccchhhhcCccCCCCCccCCc----eEEecchHhhhhhccccccchh-hhhhhhhhc-cceeEEeccccceee-e-hh
Confidence 1 111122221111111110001 1123444567888999999887 455555444 789999999998873 2 34
Q ss_pred ccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccc-cCccccCCCCC
Q 010663 163 ISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGS-IPSCLSNLTSL 241 (505)
Q Consensus 163 ~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L 241 (505)
+..+.+|+.|||++|.++ .+..+=.++.+.+.|.|+.|.+... ..+..+-+|..||+++|++... --..++++|.|
T Consensus 325 La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCL 401 (490)
T KOG1259|consen 325 LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCL 401 (490)
T ss_pred hhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHH
Confidence 778889999999999887 4555556788889999999887532 3466777889999999988732 12357889999
Q ss_pred CceeccCccCCCCC
Q 010663 242 RFLYLGSNRFTSVI 255 (505)
Q Consensus 242 ~~L~l~~n~~~~~~ 255 (505)
+.+.+.+|.+.+..
T Consensus 402 E~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 402 ETLRLTGNPLAGSV 415 (490)
T ss_pred HHHhhcCCCccccc
Confidence 99999999988653
No 39
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.97 E-value=8.8e-11 Score=115.84 Aligned_cols=245 Identities=29% Similarity=0.319 Sum_probs=133.3
Q ss_pred CCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCC
Q 010663 40 LPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKK 119 (505)
Q Consensus 40 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~ 119 (505)
+..++.+++..|.+. .+-..+..+.+|+.|++.+|.+..+. ..+..+++|++|++++|.|+.+ ..+..++.
T Consensus 71 l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i-------~~l~~l~~ 141 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKL-------EGLSTLTL 141 (414)
T ss_pred hHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcc-cchhhhhcchheeccccccccc-------cchhhccc
Confidence 455555556666554 22333555666666666666666432 2255566666666666666655 23555555
Q ss_pred CCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCC-ccccCCCCCCEEEccCCccccccCccccCCCCCCeEec
Q 010663 120 LRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIP-PAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFL 198 (505)
Q Consensus 120 L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l 198 (505)
|+.|++++|.+... ..+..+ +.|+.+++++|.+...-+ . ...+.+++.+++.+|.+.. ...+..+..+..+++
T Consensus 142 L~~L~l~~N~i~~~--~~~~~l-~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l 215 (414)
T KOG0531|consen 142 LKELNLSGNLISDI--SGLESL-KSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSL 215 (414)
T ss_pred hhhheeccCcchhc--cCCccc-hhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhc
Confidence 66666666666521 112222 566666676666653322 1 3556667777777776652 223344445555566
Q ss_pred cCccccccCCccCCCCC--CCCeEeccCcccccccCccccCCCCCCceeccCccCCCCCCccccCCCCCCEEEccCCccc
Q 010663 199 AFNKLVGSCPDELCHLD--RLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLV 276 (505)
Q Consensus 199 ~~n~~~~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~ 276 (505)
..|.++..-+ +..+. +|+.+++++|.+. ..+..+..+..+..+++.+|.+... ..+...+.+..+....+.+.
T Consensus 216 ~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 216 LDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred ccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 6666553322 22222 2677777777766 3324455666777777777766543 22233444455555555543
Q ss_pred cc---cccc-cccccCCCeeecccccccccCC
Q 010663 277 GT---LSFD-IGNLKVLLGINLSENNLSGDMP 304 (505)
Q Consensus 277 ~~---~~~~-~~~~~~L~~L~l~~n~~~~~~~ 304 (505)
.. .... ....+.++...+..|.+....+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 291 LSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred chhhhhccccccccccccccccccCccccccc
Confidence 11 1111 3455677777777776654433
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.95 E-value=6e-11 Score=117.03 Aligned_cols=268 Identities=25% Similarity=0.271 Sum_probs=187.0
Q ss_pred CCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCC
Q 010663 40 LPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKK 119 (505)
Q Consensus 40 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~ 119 (505)
.+.++.++...+.+...--. ...+..++.+.+..|.+.. +-..+..+++|+.|++.+|.+..+. ..+..+++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~------~~l~~~~~ 119 (414)
T KOG0531|consen 48 PSDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIE------NLLSSLVN 119 (414)
T ss_pred cchhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcc------cchhhhhc
Confidence 34556666655544321111 1456777788888888874 3445788999999999999999874 22788999
Q ss_pred CCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCccccCCCCCCEEEccCCccccccC-ccccCCCCCCeEec
Q 010663 120 LRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIP-TTFGRLQKLQGLFL 198 (505)
Q Consensus 120 L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~l~~l~~L~~L~l 198 (505)
|++|++++|.++...+ +..+ +.|+.|++.+|.+... ..+..++.|+.+++++|+++..-+ . ...+.+++.+++
T Consensus 120 L~~L~ls~N~I~~i~~--l~~l-~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l 193 (414)
T KOG0531|consen 120 LQVLDLSFNKITKLEG--LSTL-TLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDL 193 (414)
T ss_pred chheeccccccccccc--hhhc-cchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhc
Confidence 9999999999985433 3444 5699999999999732 456668999999999999985444 2 578899999999
Q ss_pred cCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCC--CCceeccCccCCCCCCccccCCCCCCEEEccCCccc
Q 010663 199 AFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTS--LRFLYLGSNRFTSVIPSTFWRLKDILFLDFSSNLLV 276 (505)
Q Consensus 199 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~ 276 (505)
.+|.+... ..+..+..+..+++..|.++..-+ +..+.. |+.++++.|.+... +..+..+..+..|++.+|++.
T Consensus 194 ~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 194 GGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred cCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccc-cccccccccccccchhhcccc
Confidence 99988633 334445556666888888773322 222333 89999999998743 255667888999999999886
Q ss_pred cccccccccccCCCeeeccccccccc---CCcc-ccCCCCCcEEeCcCccccccCC
Q 010663 277 GTLSFDIGNLKVLLGINLSENNLSGD---MPAT-IGGLKSLQIMDLAYNRLEGQIP 328 (505)
Q Consensus 277 ~~~~~~~~~~~~L~~L~l~~n~~~~~---~~~~-~~~l~~L~~L~l~~n~l~~~~~ 328 (505)
..-. +.....+..+....+.+... .... ....+.++...+..|......+
T Consensus 269 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 269 NLEG--LERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccc--ccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 4332 33445566666667765422 1111 4556778888888888775544
No 41
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.83 E-value=2.8e-09 Score=73.79 Aligned_cols=58 Identities=34% Similarity=0.594 Sum_probs=26.1
Q ss_pred CCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCc
Q 010663 42 TVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYN 99 (505)
Q Consensus 42 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n 99 (505)
+|++|++++|+++..-+..|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 3444444444444332334444444444444444444444444444444444444444
No 42
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.4e-09 Score=73.40 Aligned_cols=59 Identities=39% Similarity=0.602 Sum_probs=29.6
Q ss_pred CCcEEeCcCccccccCCccCcCCCCCCEEECcCCcCcccCCccccCCCCCCEEeCcCCc
Q 010663 312 SLQIMDLAYNRLEGQIPESFDDLTSLEVMNLSNNKISGSIPKSMEKLFYLRELNLSFNE 370 (505)
Q Consensus 312 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~l~l~~n~ 370 (505)
+|++|++++|+++...+..|..+++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34455555555544444445555555555555555554444455555555555555554
No 43
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.68 E-value=1.3e-08 Score=97.54 Aligned_cols=39 Identities=54% Similarity=0.866 Sum_probs=36.9
Q ss_pred ccccccHHHHHHHHhCcccCCeeecCCCceEEEEEcCCC
Q 010663 467 TLRRFSYLELLQATDNFAENNIIGRGGFGPFMEQDLKMG 505 (505)
Q Consensus 467 ~~~~~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L~~G 505 (505)
..+.|+|+||.+||+||+++++||+||||.||||.++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~ 99 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG 99 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC
Confidence 457899999999999999999999999999999999986
No 44
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=6.9e-10 Score=97.82 Aligned_cols=180 Identities=23% Similarity=0.258 Sum_probs=118.8
Q ss_pred CCCCEEeccCCcccc-cCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCcc-ccCCCCCcccccccCCCC
Q 010663 41 PTVEHLNLALNRFSG-TIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNN-LTSSTSKLSFLSSLANCK 118 (505)
Q Consensus 41 ~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~~l~~l~ 118 (505)
..||+|||+...++. .+-..+..|.+|+.|+|.++.+.+.+-..++.-.+|+.|+|+.+. ++.... ---+.+|+
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~----~ll~~scs 260 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENAL----QLLLSSCS 260 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHH----HHHHHhhh
Confidence 358888888877753 234456678888888888888888777778888888888888763 332210 02356788
Q ss_pred CCCEEECcCCCCCccC-chHHhhccccccEEEeecCCcc---ccCCccccCCCCCCEEEccCCcc-ccccCccccCCCCC
Q 010663 119 KLRSLNFIGNPLDGFL-PSSIGNLSKSLETLGIANCSIS---GNIPPAISNLSNLLTLVLEGNKL-TGPIPTTFGRLQKL 193 (505)
Q Consensus 119 ~L~~L~l~~n~~~~~~-~~~~~~l~~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~~-~~~~~~~l~~l~~L 193 (505)
.|..|++++|.+.... ...+....++|+.|+++++.-. ..+..-...+++|.+|||+.|.. +......|-+++.|
T Consensus 261 ~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L 340 (419)
T KOG2120|consen 261 RLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYL 340 (419)
T ss_pred hHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchh
Confidence 8888888888765332 2334445567888888876421 12222334688888888888753 22222345678888
Q ss_pred CeEeccCccccccCCcc---CCCCCCCCeEeccCcc
Q 010663 194 QGLFLAFNKLVGSCPDE---LCHLDRLDKLVLLGNK 226 (505)
Q Consensus 194 ~~L~l~~n~~~~~~~~~---~~~~~~L~~L~l~~n~ 226 (505)
++|.++.|.. .+|+. +...|.|.+|++.++-
T Consensus 341 ~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 341 QHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred eeeehhhhcC--CChHHeeeeccCcceEEEEecccc
Confidence 8888887753 45543 4567889999887653
No 45
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.52 E-value=1.8e-09 Score=95.25 Aligned_cols=223 Identities=19% Similarity=0.179 Sum_probs=120.8
Q ss_pred CEEECcCCCCCccCchHHhhcc-ccccEEEeecCCcccc-CCccccC-CCCCCEEEccCCccccc-cCccccCCCCCCeE
Q 010663 121 RSLNFIGNPLDGFLPSSIGNLS-KSLETLGIANCSISGN-IPPAISN-LSNLLTLVLEGNKLTGP-IPTTFGRLQKLQGL 196 (505)
Q Consensus 121 ~~L~l~~n~~~~~~~~~~~~l~-~~L~~L~l~~n~l~~~-~~~~~~~-l~~L~~L~l~~n~~~~~-~~~~l~~l~~L~~L 196 (505)
+.+|+.+-++. |..++.+. .....+.+....+... +.+.+.- -+.||++||+...++.. +-..+..|.+|+.|
T Consensus 139 ~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~l 215 (419)
T KOG2120|consen 139 QTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNL 215 (419)
T ss_pred eeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhc
Confidence 56677665554 44444432 3455566554433322 1122222 24588888888877632 22345678888888
Q ss_pred eccCccccccCCccCCCCCCCCeEeccCcc-ccc-ccCccccCCCCCCceeccCccCCCCCCcccc--CCCCCCEEEccC
Q 010663 197 FLAFNKLVGSCPDELCHLDRLDKLVLLGNK-FSG-SIPSCLSNLTSLRFLYLGSNRFTSVIPSTFW--RLKDILFLDFSS 272 (505)
Q Consensus 197 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~--~~~~L~~L~l~~ 272 (505)
.+.++++.+.+...++.-.+|+.|+++.+. ++. ...-.+.+++.|..|+++.|.+......... --++|+.|++++
T Consensus 216 SlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG 295 (419)
T KOG2120|consen 216 SLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSG 295 (419)
T ss_pred cccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhh
Confidence 888888887777778888888888887753 321 1112356677777888877766543221111 123445555554
Q ss_pred CccccccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCcc-ccccCCccCcCCCCCCEEECcCCcCcccC
Q 010663 273 NLLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNR-LEGQIPESFDDLTSLEVMNLSNNKISGSI 351 (505)
Q Consensus 273 n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 351 (505)
+.-. +..+.+ ..-...++.|.+|||++|. ++.....+|-.++.|++|.++.|.. .+
T Consensus 296 ~rrn-----------------l~~sh~----~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~ 352 (419)
T KOG2120|consen 296 YRRN-----------------LQKSHL----STLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--II 352 (419)
T ss_pred hHhh-----------------hhhhHH----HHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CC
Confidence 3210 000001 1112355666666666554 3322333455566666666666654 24
Q ss_pred Ccc---ccCCCCCCEEeCcCC
Q 010663 352 PKS---MEKLFYLRELNLSFN 369 (505)
Q Consensus 352 p~~---l~~l~~L~~l~l~~n 369 (505)
|+. +...++|.+||+-++
T Consensus 353 p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 353 PETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hHHeeeeccCcceEEEEeccc
Confidence 432 345566677766644
No 46
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=3.2e-08 Score=87.49 Aligned_cols=86 Identities=31% Similarity=0.298 Sum_probs=43.8
Q ss_pred CCCCCCEEeccCCcccc--cCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCC
Q 010663 39 SLPTVEHLNLALNRFSG--TIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLAN 116 (505)
Q Consensus 39 ~l~~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 116 (505)
.+.+++.+||.+|.++. .+...+.+++.|++|+|+.|++...+-..=..+.+|+.|.|.+..+.-... -..+..
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~----~s~l~~ 144 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQS----TSSLDD 144 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhh----hhhhhc
Confidence 45566666666666642 333444566666666666666553322111234556666665554432210 033455
Q ss_pred CCCCCEEECcCC
Q 010663 117 CKKLRSLNFIGN 128 (505)
Q Consensus 117 l~~L~~L~l~~n 128 (505)
+|.++.|.++.|
T Consensus 145 lP~vtelHmS~N 156 (418)
T KOG2982|consen 145 LPKVTELHMSDN 156 (418)
T ss_pred chhhhhhhhccc
Confidence 566666666555
No 47
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.44 E-value=4.8e-08 Score=86.40 Aligned_cols=86 Identities=21% Similarity=0.204 Sum_probs=37.5
Q ss_pred CCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCcccc-CCccccCC
Q 010663 88 LRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGN-IPPAISNL 166 (505)
Q Consensus 88 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~-~~~~~~~l 166 (505)
++.++++||.+|.++...+.. .-+.++|.|+.|+++.|++...+...-... .+|++|-|.+..+... ....+..+
T Consensus 70 ~~~v~elDL~~N~iSdWseI~---~ile~lP~l~~LNls~N~L~s~I~~lp~p~-~nl~~lVLNgT~L~w~~~~s~l~~l 145 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIG---AILEQLPALTTLNLSCNSLSSDIKSLPLPL-KNLRVLVLNGTGLSWTQSTSSLDDL 145 (418)
T ss_pred hhhhhhhhcccchhccHHHHH---HHHhcCccceEeeccCCcCCCccccCcccc-cceEEEEEcCCCCChhhhhhhhhcc
Confidence 445555555555555442111 233455555555555555542221110111 3455555555444321 11223344
Q ss_pred CCCCEEEccCC
Q 010663 167 SNLLTLVLEGN 177 (505)
Q Consensus 167 ~~L~~L~l~~n 177 (505)
+.++.|.++.|
T Consensus 146 P~vtelHmS~N 156 (418)
T KOG2982|consen 146 PKVTELHMSDN 156 (418)
T ss_pred hhhhhhhhccc
Confidence 45555555544
No 48
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.42 E-value=9.3e-09 Score=101.32 Aligned_cols=179 Identities=27% Similarity=0.336 Sum_probs=101.2
Q ss_pred CccCCCCCCCCeEeccCcccccccCccccCC-CCCCceeccCccCC----------CCCCccccCCCCCCEEEccCCccc
Q 010663 208 PDELCHLDRLDKLVLLGNKFSGSIPSCLSNL-TSLRFLYLGSNRFT----------SVIPSTFWRLKDILFLDFSSNLLV 276 (505)
Q Consensus 208 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~~~----------~~~~~~~~~~~~L~~L~l~~n~l~ 276 (505)
|-.+..+.+|+.|.+.++.+... ..+..+ ..|+.|.-.+ .++ |.+...+ .+..|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 55677888999999999887631 011111 1222222111 110 1111111 1234556666777665
Q ss_pred cccccccccccCCCeeecccccccccCCccccCCCCCcEEeCcCccccccCCc-cCcCCCCCCEEECcCCcCcccCCccc
Q 010663 277 GTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKSLQIMDLAYNRLEGQIPE-SFDDLTSLEVMNLSNNKISGSIPKSM 355 (505)
Q Consensus 277 ~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~l 355 (505)
....++.-++.|+.|+|++|+++... .+..|++|++|||++|.+. .+|. ....+ .|+.|.+++|.++.. ..+
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL--~gi 250 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTL--RGI 250 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhh--hhH
Confidence 33445556677777777777776332 5667777788888887776 3443 22233 377777777777632 356
Q ss_pred cCCCCCCEEeCcCCcCcccCCC--CCccCccCcccccCCccCCC
Q 010663 356 EKLFYLRELNLSFNELEGEIPS--GGIFANFTAESFMGNELLCG 397 (505)
Q Consensus 356 ~~l~~L~~l~l~~n~l~~~~p~--~~~~~~~~~~~~~~n~~lc~ 397 (505)
.++.+|+.||+++|-+.+.--- -+.+..+..+.+.|||.-|.
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 6777777778887766543211 12344555666777774443
No 49
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.39 E-value=1.5e-07 Score=82.25 Aligned_cols=170 Identities=18% Similarity=0.193 Sum_probs=95.0
Q ss_pred hhhcCCCCcEEEcccccccccCchhhhc---CCCCCCEEeccCCcc---cccC-------chhhhCCCCCCEEEccCCcC
Q 010663 11 TIFNMSTLKIIILINNSLSGSLPSRIGL---SLPTVEHLNLALNRF---SGTI-------PSSITNASKLTLLELGGNTF 77 (505)
Q Consensus 11 ~~~~l~~L~~L~ls~n~~~~~ip~~~~~---~l~~L~~L~l~~n~~---~~~~-------~~~~~~l~~L~~L~l~~n~~ 77 (505)
.+..+..+..++||+|.+..+-..+++. +-++|+..++++-.. ...+ ...+.+|++|+..+|++|.+
T Consensus 25 el~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAf 104 (388)
T COG5238 25 ELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAF 104 (388)
T ss_pred HHHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeecccccc
Confidence 4455778888899998886443333321 446677777765321 1122 24456788888888888887
Q ss_pred CccCccc----ccCCCCCCEEeccCccccCCCC-C-------cccccccCCCCCCCEEECcCCCCCccCch---HHhhcc
Q 010663 78 SGLIPDT----IGNLRNLAWLGLAYNNLTSSTS-K-------LSFLSSLANCKKLRSLNFIGNPLDGFLPS---SIGNLS 142 (505)
Q Consensus 78 ~~~~~~~----l~~l~~L~~L~L~~n~l~~~~~-~-------~~~~~~l~~l~~L~~L~l~~n~~~~~~~~---~~~~l~ 142 (505)
....|.. ++.-+.|.+|.+++|.+-.... . ++......+-|.|++.....|++..--.. ......
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh 184 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESH 184 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhh
Confidence 7665544 3456778888888886654310 0 01112334556777777777766521111 111111
Q ss_pred ccccEEEeecCCcccc-----CCccccCCCCCCEEEccCCccc
Q 010663 143 KSLETLGIANCSISGN-----IPPAISNLSNLLTLVLEGNKLT 180 (505)
Q Consensus 143 ~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~~~ 180 (505)
..|+++.+..|.|.-. +-..+..+++|+.|||..|.++
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 3566666666655311 0112234566666666666555
No 50
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.29 E-value=2.6e-08 Score=98.31 Aligned_cols=127 Identities=25% Similarity=0.297 Sum_probs=82.7
Q ss_pred CCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEec
Q 010663 17 TLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGL 96 (505)
Q Consensus 17 ~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L 96 (505)
.|.+.++++|.+. .+-.++- -++.|+.|+|+.|+++.. +.+..|++|++|||+.|.++...--.-..+. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLq-ll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQ-LLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHH-HHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeee
Confidence 3666677777776 5555554 567788888888877643 3677778888888888877743222223344 778888
Q ss_pred cCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCc-hHHhhccccccEEEeecCCcc
Q 010663 97 AYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLP-SSIGNLSKSLETLGIANCSIS 156 (505)
Q Consensus 97 ~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~~L~~L~l~~n~l~ 156 (505)
.+|.++.. ..+.++++|+.||+++|-+.+.-. ..++.+ ..|+.|.|.+|.+.
T Consensus 240 rnN~l~tL-------~gie~LksL~~LDlsyNll~~hseL~pLwsL-s~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL-------RGIENLKSLYGLDLSYNLLSEHSELEPLWSL-SSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh-------hhHHhhhhhhccchhHhhhhcchhhhHHHHH-HHHHHHhhcCCccc
Confidence 88777665 456777778888888876654322 223344 46777777777654
No 51
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.28 E-value=1.7e-07 Score=81.87 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=21.4
Q ss_pred CCCCCCEEeccCCccccc----CchhhhCCCCCCEEEccC
Q 010663 39 SLPTVEHLNLALNRFSGT----IPSSITNASKLTLLELGG 74 (505)
Q Consensus 39 ~l~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~ 74 (505)
.+..+..++||+|.|... +...+.+-.+|+..++++
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd 67 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSD 67 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhh
Confidence 467777777777777533 233344455666666654
No 52
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.24 E-value=4.1e-06 Score=79.74 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=22.4
Q ss_pred CCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCc
Q 010663 40 LPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYN 99 (505)
Q Consensus 40 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n 99 (505)
+.++++|++++|.++ .+|. -..+|++|.++++.-...+|..+ .++|+.|++++|
T Consensus 51 ~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 51 ARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred hcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 444555555555444 3331 11235555554432222333322 134555555544
No 53
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.14 E-value=2.2e-07 Score=72.73 Aligned_cols=82 Identities=29% Similarity=0.322 Sum_probs=36.4
Q ss_pred CCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccc
Q 010663 66 KLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSL 145 (505)
Q Consensus 66 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L 145 (505)
+|...+|++|.+....+..-...+.++.|+|++|.++.+| ..+..++.|+.|+++.|++. ..|..+..+ .++
T Consensus 54 el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvP------eE~Aam~aLr~lNl~~N~l~-~~p~vi~~L-~~l 125 (177)
T KOG4579|consen 54 ELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVP------EELAAMPALRSLNLRFNPLN-AEPRVIAPL-IKL 125 (177)
T ss_pred eEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhch------HHHhhhHHhhhcccccCccc-cchHHHHHH-HhH
Confidence 3444445555444322222223334445555555554444 33444455555555555444 334444443 344
Q ss_pred cEEEeecCCc
Q 010663 146 ETLGIANCSI 155 (505)
Q Consensus 146 ~~L~l~~n~l 155 (505)
-.|+..+|.+
T Consensus 126 ~~Lds~~na~ 135 (177)
T KOG4579|consen 126 DMLDSPENAR 135 (177)
T ss_pred HHhcCCCCcc
Confidence 4444444443
No 54
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.13 E-value=1e-05 Score=77.06 Aligned_cols=137 Identities=20% Similarity=0.238 Sum_probs=81.4
Q ss_pred hhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCC-cCCccCcccccCCC
Q 010663 11 TIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGN-TFSGLIPDTIGNLR 89 (505)
Q Consensus 11 ~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n-~~~~~~~~~l~~l~ 89 (505)
-+..|+++++|+++++.++ .+|. -..+|++|.+++|.--..+|..+ ..+|++|++++| .+. .+|.
T Consensus 47 r~~~~~~l~~L~Is~c~L~-sLP~----LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------ 112 (426)
T PRK15386 47 QIEEARASGRLYIKDCDIE-SLPV----LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------ 112 (426)
T ss_pred HHHHhcCCCEEEeCCCCCc-ccCC----CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------
Confidence 3556899999999999998 8882 24579999998864434677655 358999999998 444 4453
Q ss_pred CCCEEeccCccccCCCCCcccccccCCC-CCCCEEECcCCCCC--ccCchHHhhccccccEEEeecCCccccCCccccCC
Q 010663 90 NLAWLGLAYNNLTSSTSKLSFLSSLANC-KKLRSLNFIGNPLD--GFLPSSIGNLSKSLETLGIANCSISGNIPPAISNL 166 (505)
Q Consensus 90 ~L~~L~L~~n~l~~~~~~~~~~~~l~~l-~~L~~L~l~~n~~~--~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 166 (505)
.|+.|++..+..... ..+ ++|+.|.+.+++.. ..+| ..++++|++|++.+|... .+|..+.
T Consensus 113 sLe~L~L~~n~~~~L----------~~LPssLk~L~I~~~n~~~~~~lp---~~LPsSLk~L~Is~c~~i-~LP~~LP-- 176 (426)
T PRK15386 113 SVRSLEIKGSATDSI----------KNVPNGLTSLSINSYNPENQARID---NLISPSLKTLSLTGCSNI-ILPEKLP-- 176 (426)
T ss_pred ccceEEeCCCCCccc----------ccCcchHhheeccccccccccccc---cccCCcccEEEecCCCcc-cCccccc--
Confidence 477777765544322 111 24556665432211 0111 123356677777666543 2333222
Q ss_pred CCCCEEEccCC
Q 010663 167 SNLLTLVLEGN 177 (505)
Q Consensus 167 ~~L~~L~l~~n 177 (505)
.+|+.|+++.+
T Consensus 177 ~SLk~L~ls~n 187 (426)
T PRK15386 177 ESLQSITLHIE 187 (426)
T ss_pred ccCcEEEeccc
Confidence 35555555543
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.01 E-value=5.9e-06 Score=52.19 Aligned_cols=35 Identities=31% Similarity=0.576 Sum_probs=12.8
Q ss_pred CCEEeccCCcccccCchhhhCCCCCCEEEccCCcCC
Q 010663 43 VEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFS 78 (505)
Q Consensus 43 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~ 78 (505)
|++|++++|+++ .+|..+++|++|++|++++|.++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 334444444443 23333334444444444444333
No 56
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.99 E-value=7.2e-07 Score=69.85 Aligned_cols=135 Identities=19% Similarity=0.215 Sum_probs=94.0
Q ss_pred CCCcEEEcccccccccCchhhhc--CCCCCCEEeccCCcccccCchhhh-CCCCCCEEEccCCcCCccCcccccCCCCCC
Q 010663 16 STLKIIILINNSLSGSLPSRIGL--SLPTVEHLNLALNRFSGTIPSSIT-NASKLTLLELGGNTFSGLIPDTIGNLRNLA 92 (505)
Q Consensus 16 ~~L~~L~ls~n~~~~~ip~~~~~--~l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~ 92 (505)
+.+..++|+++.+- .|++.... ...+|+..+|++|.+. .+|+.|. +.+.++.|++++|.++ .+|..++.++.|+
T Consensus 27 kE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr 103 (177)
T KOG4579|consen 27 KELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR 103 (177)
T ss_pred HHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh
Confidence 34667888888775 56654431 4566777899999988 5666664 5568899999999998 5677799999999
Q ss_pred EEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEeecCCccccCCc
Q 010663 93 WLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGIANCSISGNIPP 161 (505)
Q Consensus 93 ~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 161 (505)
.|+++.|.+...| ..+..+.+|..|+..+|.+. .+|..+... ...-..++..+.+.+.-+.
T Consensus 104 ~lNl~~N~l~~~p------~vi~~L~~l~~Lds~~na~~-eid~dl~~s-~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 104 SLNLRFNPLNAEP------RVIAPLIKLDMLDSPENARA-EIDVDLFYS-SLPALIKLGNEPLGDETKK 164 (177)
T ss_pred hcccccCccccch------HHHHHHHhHHHhcCCCCccc-cCcHHHhcc-ccHHHHHhcCCcccccCcc
Confidence 9999999988777 55666888888998888876 455543321 2222334455555544443
No 57
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.98 E-value=4.1e-06 Score=86.61 Aligned_cols=110 Identities=26% Similarity=0.378 Sum_probs=72.0
Q ss_pred CCCcEEEcccccc-cccCchhhhcCCCCCCEEeccCCcccc-cCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCE
Q 010663 16 STLKIIILINNSL-SGSLPSRIGLSLPTVEHLNLALNRFSG-TIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAW 93 (505)
Q Consensus 16 ~~L~~L~ls~n~~-~~~ip~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~ 93 (505)
.+|++||+++... ....|..++..+|+|++|.+.+-.+.. .+.....++++|+.||+++++++.. ..++++++||+
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4677778777542 335566666677888888887766532 2334455777888888888777754 55777788887
Q ss_pred EeccCccccCCCCCcccccccCCCCCCCEEECcCCCCC
Q 010663 94 LGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLD 131 (505)
Q Consensus 94 L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~ 131 (505)
|.+.+=.+.... .+..+.++++|+.||+|.....
T Consensus 200 L~mrnLe~e~~~----~l~~LF~L~~L~vLDIS~~~~~ 233 (699)
T KOG3665|consen 200 LSMRNLEFESYQ----DLIDLFNLKKLRVLDISRDKNN 233 (699)
T ss_pred HhccCCCCCchh----hHHHHhcccCCCeeeccccccc
Confidence 777665554432 1245667777777777776544
No 58
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.96 E-value=8.9e-06 Score=51.38 Aligned_cols=37 Identities=38% Similarity=0.600 Sum_probs=32.8
Q ss_pred CCCcEEEcccccccccCchhhhcCCCCCCEEeccCCccc
Q 010663 16 STLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFS 54 (505)
Q Consensus 16 ~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~ 54 (505)
++|++|++++|.++ ++|..+. +|++|++|++++|.++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~-~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELS-NLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGT-TCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHh-CCCCCCEEEecCCCCC
Confidence 57999999999999 8998888 8999999999999998
No 59
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.88 E-value=1.5e-05 Score=66.99 Aligned_cols=106 Identities=25% Similarity=0.365 Sum_probs=70.2
Q ss_pred CcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEecc
Q 010663 18 LKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLA 97 (505)
Q Consensus 18 L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~ 97 (505)
=+.+++.+.++. .+- ..+..+.....+||++|.+... ..|..++.|.+|.+++|.|+.+-|..-.-+++|+.|.|.
T Consensus 21 e~e~~LR~lkip-~ie-nlg~~~d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 21 ERELDLRGLKIP-VIE-NLGATLDQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred cccccccccccc-chh-hccccccccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEec
Confidence 345555555443 111 2333455677788888877522 345667788888888888887766655567788888888
Q ss_pred CccccCCCCCcccccccCCCCCCCEEECcCCCCC
Q 010663 98 YNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLD 131 (505)
Q Consensus 98 ~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~ 131 (505)
+|.+....+. ..+..||+|++|.+-+|+.+
T Consensus 97 nNsi~~l~dl----~pLa~~p~L~~Ltll~Npv~ 126 (233)
T KOG1644|consen 97 NNSIQELGDL----DPLASCPKLEYLTLLGNPVE 126 (233)
T ss_pred Ccchhhhhhc----chhccCCccceeeecCCchh
Confidence 8887766321 45677788888887777765
No 60
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.82 E-value=2.8e-05 Score=65.43 Aligned_cols=104 Identities=26% Similarity=0.315 Sum_probs=54.0
Q ss_pred ccccEEEeecCCccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccC-CccCCCCCCCCeEe
Q 010663 143 KSLETLGIANCSISGNIPPAISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSC-PDELCHLDRLDKLV 221 (505)
Q Consensus 143 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~~~~~L~~L~ 221 (505)
.....+||++|.+.. -..|..+++|++|.+.+|+++.+-|.--.-+++|+.|.+.+|++...- -+.+..+|.|++|.
T Consensus 42 d~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhh--cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 345566666666541 134555666666666666666544443334556666666666654221 12244556666666
Q ss_pred ccCccccccc---CccccCCCCCCceeccC
Q 010663 222 LLGNKFSGSI---PSCLSNLTSLRFLYLGS 248 (505)
Q Consensus 222 l~~n~l~~~~---~~~~~~l~~L~~L~l~~ 248 (505)
+-+|.++..- ...+..+|+|+.||+..
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhh
Confidence 6666554211 11234455555555543
No 61
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.76 E-value=1.3e-05 Score=83.03 Aligned_cols=135 Identities=17% Similarity=0.230 Sum_probs=96.6
Q ss_pred cCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCc-cCcccccCCCCCC
Q 010663 14 NMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSG-LIPDTIGNLRNLA 92 (505)
Q Consensus 14 ~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~l~~l~~L~ 92 (505)
-||+|++|.+++-.+...=-..++.++++|..||+|+++++.. .+++++++|+.|.+.+=.+.. ..-..+-+|++|+
T Consensus 146 ~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~ 223 (699)
T KOG3665|consen 146 MLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLR 223 (699)
T ss_pred hCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCC
Confidence 5899999999998875332234455899999999999999843 789999999999998766653 1223467899999
Q ss_pred EEeccCccccCCCC-CcccccccCCCCCCCEEECcCCCCCccCchHHhhccccccEEEe
Q 010663 93 WLGLAYNNLTSSTS-KLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLSKSLETLGI 150 (505)
Q Consensus 93 ~L~L~~n~l~~~~~-~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~~L~~L~l 150 (505)
+||+|.......+. ...++..-..+|+|+.||.+++.+...+-+.+-.-.++|+.+..
T Consensus 224 vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~ 282 (699)
T KOG3665|consen 224 VLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAA 282 (699)
T ss_pred eeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhh
Confidence 99999876655431 11122333558999999999998876665555544345555443
No 62
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.48 E-value=0.00034 Score=56.70 Aligned_cols=82 Identities=16% Similarity=0.211 Sum_probs=28.5
Q ss_pred ccCCCCCCEEEccCCccccccCccccCCCCCCeEeccCccccccCCccCCCCCCCCeEeccCcccccccCccccCCCCCC
Q 010663 163 ISNLSNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSCPDELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLR 242 (505)
Q Consensus 163 ~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 242 (505)
|..+++|+.+.+.. .+.......|..+.+|+.+.+..+ +.......|.++++|+.+.+.+ .+.......|..+++|+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 44444555555442 233333334444445555554442 3322333444444455554433 22212222344444444
Q ss_pred ceecc
Q 010663 243 FLYLG 247 (505)
Q Consensus 243 ~L~l~ 247 (505)
.+++.
T Consensus 85 ~i~~~ 89 (129)
T PF13306_consen 85 NIDIP 89 (129)
T ss_dssp EEEET
T ss_pred ccccC
Confidence 44443
No 63
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.48 E-value=5.7e-06 Score=77.04 Aligned_cols=277 Identities=18% Similarity=0.147 Sum_probs=145.1
Q ss_pred CCcEEEcccccccccCc-hhhhcCCCCCCEEeccCCcc-cccCchhh-hCCCCCCEEEccCC-cCCccCcc-cccCCCCC
Q 010663 17 TLKIIILINNSLSGSLP-SRIGLSLPTVEHLNLALNRF-SGTIPSSI-TNASKLTLLELGGN-TFSGLIPD-TIGNLRNL 91 (505)
Q Consensus 17 ~L~~L~ls~n~~~~~ip-~~~~~~l~~L~~L~l~~n~~-~~~~~~~~-~~l~~L~~L~l~~n-~~~~~~~~-~l~~l~~L 91 (505)
-|+.|.+.+..-.+.-+ ..+..+++++++|++.++.. +...-..+ ..|++|++|++..| .++...-. ....+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 36677777665433222 12333778888888777642 22222222 35778888888774 45544333 23357888
Q ss_pred CEEeccCcc-ccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhcc---ccccEEEeecCC-ccccC-CccccC
Q 010663 92 AWLGLAYNN-LTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNLS---KSLETLGIANCS-ISGNI-PPAISN 165 (505)
Q Consensus 92 ~~L~L~~n~-l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~---~~L~~L~l~~n~-l~~~~-~~~~~~ 165 (505)
++|+++++. +++. ... .-..++..++.+.+.++.-. -...+.... ..+..+++..|. ++..- -..-..
T Consensus 219 ~~lNlSwc~qi~~~--gv~--~~~rG~~~l~~~~~kGC~e~--~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~ 292 (483)
T KOG4341|consen 219 KYLNLSWCPQISGN--GVQ--ALQRGCKELEKLSLKGCLEL--ELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACG 292 (483)
T ss_pred HHhhhccCchhhcC--cch--HHhccchhhhhhhhcccccc--cHHHHHHHhccChHhhccchhhhccccchHHHHHhhh
Confidence 888888774 3321 000 23445566666666654211 112222211 124455554543 22111 011124
Q ss_pred CCCCCEEEccCCcccc-ccCcc-ccCCCCCCeEeccCccc-cccCCccC-CCCCCCCeEeccCcccc--cccCccccCCC
Q 010663 166 LSNLLTLVLEGNKLTG-PIPTT-FGRLQKLQGLFLAFNKL-VGSCPDEL-CHLDRLDKLVLLGNKFS--GSIPSCLSNLT 239 (505)
Q Consensus 166 l~~L~~L~l~~n~~~~-~~~~~-l~~l~~L~~L~l~~n~~-~~~~~~~~-~~~~~L~~L~l~~n~l~--~~~~~~~~~l~ 239 (505)
+..||.|+.+++...+ ..-.. -.++++|+.|.++.++. +..-...+ .+++.|+.+++..+... +.+...-.+++
T Consensus 293 c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~ 372 (483)
T KOG4341|consen 293 CHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCP 372 (483)
T ss_pred hhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCc
Confidence 6677777777654321 11112 23567788888777753 21111112 24677888877776532 22333335677
Q ss_pred CCCceeccCccCCCCC-----CccccCCCCCCEEEccCCcccc-ccccccccccCCCeeecccccc
Q 010663 240 SLRFLYLGSNRFTSVI-----PSTFWRLKDILFLDFSSNLLVG-TLSFDIGNLKVLLGINLSENNL 299 (505)
Q Consensus 240 ~L~~L~l~~n~~~~~~-----~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~l~~n~~ 299 (505)
.|+.+.++.+...... ...-..+..|..+.|+++.... ..-..+..+++|+.+++-+++-
T Consensus 373 ~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~ 438 (483)
T KOG4341|consen 373 RLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQD 438 (483)
T ss_pred hhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhh
Confidence 8888888866532211 1222345677888888876542 2233456778888888777653
No 64
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.47 E-value=3.6e-05 Score=67.60 Aligned_cols=110 Identities=22% Similarity=0.228 Sum_probs=69.1
Q ss_pred CCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCC--cCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCC
Q 010663 39 SLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGN--TFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLAN 116 (505)
Q Consensus 39 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n--~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 116 (505)
.+..|+.+++.+..++.. ..+-.+++|+.|.++.| .+++.++.....+++|++++++.|++..+. -+..+..
T Consensus 41 ~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~ls----tl~pl~~ 114 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLS----TLRPLKE 114 (260)
T ss_pred cccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccccc----ccchhhh
Confidence 455666666666555422 23445677888888877 555555555556688888888888776541 1145667
Q ss_pred CCCCCEEECcCCCCCccC--chHHhhccccccEEEeecCC
Q 010663 117 CKKLRSLNFIGNPLDGFL--PSSIGNLSKSLETLGIANCS 154 (505)
Q Consensus 117 l~~L~~L~l~~n~~~~~~--~~~~~~l~~~L~~L~l~~n~ 154 (505)
+.+|..|++.+|..+..- -..++.+.++|++|+-....
T Consensus 115 l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~ 154 (260)
T KOG2739|consen 115 LENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVD 154 (260)
T ss_pred hcchhhhhcccCCccccccHHHHHHHHhhhhccccccccC
Confidence 777888888888766421 12345555778877765443
No 65
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.40 E-value=0.00047 Score=55.90 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=13.1
Q ss_pred cCCCCCCCCeEeccCcccccccCccccCCCCCCceeccC
Q 010663 210 ELCHLDRLDKLVLLGNKFSGSIPSCLSNLTSLRFLYLGS 248 (505)
Q Consensus 210 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 248 (505)
.|..+.+|+.+.+.. .+.......|..+++|+.+.+..
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~ 44 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPN 44 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESS
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhcccccccccccccc
Confidence 344444555555442 23323333344444444444443
No 66
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.33 E-value=1.3e-05 Score=74.62 Aligned_cols=261 Identities=18% Similarity=0.102 Sum_probs=157.0
Q ss_pred hhcCCCCcEEEccccc-ccccCchhhhcCCCCCCEEeccCC-cccccCch-hhhCCCCCCEEEccCC-cCCcc-Cccccc
Q 010663 12 IFNMSTLKIIILINNS-LSGSLPSRIGLSLPTVEHLNLALN-RFSGTIPS-SITNASKLTLLELGGN-TFSGL-IPDTIG 86 (505)
Q Consensus 12 ~~~l~~L~~L~ls~n~-~~~~ip~~~~~~l~~L~~L~l~~n-~~~~~~~~-~~~~l~~L~~L~l~~n-~~~~~-~~~~l~ 86 (505)
-.+|+++++|++.++. +++..-..+...|++|++|++..| .++...-. --..+++|++++++.+ .+++. +...+.
T Consensus 160 ~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~r 239 (483)
T KOG4341|consen 160 ASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQR 239 (483)
T ss_pred hhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhc
Confidence 4579999999998875 343444456668999999999884 45544333 3357999999999988 45542 222345
Q ss_pred CCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCC-CCccCchHHhhccccccEEEeecCCccc-cCCcc-c
Q 010663 87 NLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNP-LDGFLPSSIGNLSKSLETLGIANCSISG-NIPPA-I 163 (505)
Q Consensus 87 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~~L~~L~l~~n~l~~-~~~~~-~ 163 (505)
++..++.+.+.+|.-.+.. .+...=..++.+..+++..+. ++...-..+......|+.|+.+++...+ ..-.. -
T Consensus 240 G~~~l~~~~~kGC~e~~le---~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg 316 (483)
T KOG4341|consen 240 GCKELEKLSLKGCLELELE---ALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALG 316 (483)
T ss_pred cchhhhhhhhcccccccHH---HHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHh
Confidence 6777777777655322211 000112345556666665553 3322222233334578888888765422 11112 2
Q ss_pred cCCCCCCEEEccCCcc-ccccCccc-cCCCCCCeEeccCcccccc--CCccCCCCCCCCeEeccCccccc-c----cCcc
Q 010663 164 SNLSNLLTLVLEGNKL-TGPIPTTF-GRLQKLQGLFLAFNKLVGS--CPDELCHLDRLDKLVLLGNKFSG-S----IPSC 234 (505)
Q Consensus 164 ~~l~~L~~L~l~~n~~-~~~~~~~l-~~l~~L~~L~l~~n~~~~~--~~~~~~~~~~L~~L~l~~n~l~~-~----~~~~ 234 (505)
.++.+|+.+.+++++- +..--..+ .+++.|+.+++..+..... +...-.+++.|+.+.++++.+.. . +...
T Consensus 317 ~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~ 396 (483)
T KOG4341|consen 317 QHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSS 396 (483)
T ss_pred cCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhc
Confidence 3678899999888863 21111112 2567888888887654321 22223467889999998775431 1 1122
Q ss_pred ccCCCCCCceeccCccCC-CCCCccccCCCCCCEEEccCCcc
Q 010663 235 LSNLTSLRFLYLGSNRFT-SVIPSTFWRLKDILFLDFSSNLL 275 (505)
Q Consensus 235 ~~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~L~~L~l~~n~l 275 (505)
-..+..|..+.++++... ...-+.+..+++|+.+++-.++-
T Consensus 397 ~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~ 438 (483)
T KOG4341|consen 397 SCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQD 438 (483)
T ss_pred cccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhh
Confidence 234567888888888754 33445567788888888877754
No 67
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.30 E-value=0.00017 Score=63.49 Aligned_cols=110 Identities=24% Similarity=0.254 Sum_probs=57.9
Q ss_pred CchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCch
Q 010663 57 IPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPS 136 (505)
Q Consensus 57 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~ 136 (505)
+....-.+..|+.|++.+..++.. ..+-.+++|+.|.++.|....... +. .....+|+|+++++++|.+.. ++
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~-l~--vl~e~~P~l~~l~ls~Nki~~--ls 107 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGG-LE--VLAEKAPNLKVLNLSGNKIKD--LS 107 (260)
T ss_pred cccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCccccccc-ce--ehhhhCCceeEEeecCCcccc--cc
Confidence 333344455666666666555432 234556777777777774332210 00 223455777788887777652 22
Q ss_pred H---HhhccccccEEEeecCCccccCC---ccccCCCCCCEEEc
Q 010663 137 S---IGNLSKSLETLGIANCSISGNIP---PAISNLSNLLTLVL 174 (505)
Q Consensus 137 ~---~~~l~~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l 174 (505)
. +..+ .+|..|++.+|..+..-- ..|.-+++|++|+-
T Consensus 108 tl~pl~~l-~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 108 TLRPLKEL-ENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred ccchhhhh-cchhhhhcccCCccccccHHHHHHHHhhhhccccc
Confidence 2 2233 456777777776553110 12344566665543
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.21 E-value=2e-05 Score=69.52 Aligned_cols=88 Identities=30% Similarity=0.237 Sum_probs=50.2
Q ss_pred CCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcccccccCCCCC
Q 010663 40 LPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKK 119 (505)
Q Consensus 40 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~ 119 (505)
+.+.+.|++.+|.+++. ....+++.|++|.|+-|+|+...| +..|++|++|+|..|.|..+.+ +.-+.++|+
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldE----L~YLknlps 89 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDE----LEYLKNLPS 89 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHH----HHHHhcCch
Confidence 34455555555555422 233455666666666666654322 5566666666666666655421 144566777
Q ss_pred CCEEECcCCCCCccCc
Q 010663 120 LRSLNFIGNPLDGFLP 135 (505)
Q Consensus 120 L~~L~l~~n~~~~~~~ 135 (505)
|+.|.|..|+-.|.-+
T Consensus 90 Lr~LWL~ENPCc~~ag 105 (388)
T KOG2123|consen 90 LRTLWLDENPCCGEAG 105 (388)
T ss_pred hhhHhhccCCcccccc
Confidence 7777777776655444
No 69
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.08 E-value=0.0001 Score=74.97 Aligned_cols=65 Identities=28% Similarity=0.402 Sum_probs=30.6
Q ss_pred CCCCCCCEEECcCCC-CCccCchHHhhccccccEEEeecCC-ccccC-CccccCCCCCCEEEccCCcc
Q 010663 115 ANCKKLRSLNFIGNP-LDGFLPSSIGNLSKSLETLGIANCS-ISGNI-PPAISNLSNLLTLVLEGNKL 179 (505)
Q Consensus 115 ~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~~L~~L~l~~n~-l~~~~-~~~~~~l~~L~~L~l~~n~~ 179 (505)
..+++|+.++++++. ++...-..+...+++|++|.+..|. ++... -.....++.|++|+++++..
T Consensus 240 ~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 240 SICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred hhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 344555666665555 4433333344323456666655554 22211 11223455566666665543
No 70
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.04 E-value=2e-05 Score=69.56 Aligned_cols=105 Identities=22% Similarity=0.247 Sum_probs=79.5
Q ss_pred CCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCc-ccccCCCCCCE
Q 010663 15 MSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIP-DTIGNLRNLAW 93 (505)
Q Consensus 15 l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~l~~l~~L~~ 93 (505)
+.+++.|++.++.+. .| ++...|+.|++|.|+-|+|+.. ..+..|++|++|.|..|.|.+.-. .-+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~-DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLD-DI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCcc-HH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 557889999999988 44 3455899999999999999844 458899999999999999875421 22668999999
Q ss_pred EeccCccccCCCCCcccccccCCCCCCCEEE
Q 010663 94 LGLAYNNLTSSTSKLSFLSSLANCKKLRSLN 124 (505)
Q Consensus 94 L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~ 124 (505)
|.|..|...+....-.-...+.-+|+|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 9999998776621111113456678888876
No 71
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.65 E-value=0.00017 Score=73.25 Aligned_cols=239 Identities=20% Similarity=0.159 Sum_probs=122.1
Q ss_pred CCCCCCEEeccCccccCCCCCcccccccCCCCCCCEEECcCC-CCCccCc---hHHhhccccccEEEeecCC-ccccCCc
Q 010663 87 NLRNLAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGN-PLDGFLP---SSIGNLSKSLETLGIANCS-ISGNIPP 161 (505)
Q Consensus 87 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n-~~~~~~~---~~~~~l~~~L~~L~l~~n~-l~~~~~~ 161 (505)
.++.|+.|.+..+.-..... .......+++|+.|+++++ ......+ ..+.....+|+.|+++++. ++...-.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~---~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~ 262 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDS---LDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLS 262 (482)
T ss_pred hCchhhHhhhcccccCChhh---HHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHH
Confidence 46778888777663222100 1144567788888888763 2111111 2233334678888888887 4433333
Q ss_pred cccC-CCCCCEEEccCCc-cccccC-ccccCCCCCCeEeccCcccccc--CCccCCCCCCCCeEeccCcccccccCcccc
Q 010663 162 AISN-LSNLLTLVLEGNK-LTGPIP-TTFGRLQKLQGLFLAFNKLVGS--CPDELCHLDRLDKLVLLGNKFSGSIPSCLS 236 (505)
Q Consensus 162 ~~~~-l~~L~~L~l~~n~-~~~~~~-~~l~~l~~L~~L~l~~n~~~~~--~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 236 (505)
.+.. +++|++|.+.++. ++..-- .....++.|++|+++.+..... +.....++++|+.+.+....
T Consensus 263 ~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~---------- 332 (482)
T KOG1947|consen 263 ALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN---------- 332 (482)
T ss_pred HHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------
Confidence 3333 7889998877776 443221 2234678899999987765311 12223345666665443221
Q ss_pred CCCCCCceeccCccCC---CCCCccccCCCCCCEEEccCCcccccc-ccccccccCCCeeecccccccccCCccccCCCC
Q 010663 237 NLTSLRFLYLGSNRFT---SVIPSTFWRLKDILFLDFSSNLLVGTL-SFDIGNLKVLLGINLSENNLSGDMPATIGGLKS 312 (505)
Q Consensus 237 ~l~~L~~L~l~~n~~~---~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~ 312 (505)
.++.++.+.+...... .........++.++.+.+..+...... ...+..++.|. ..+.. .......
T Consensus 333 ~c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~---------~~~~~~~ 402 (482)
T KOG1947|consen 333 GCPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLEL---------RLCRSDS 402 (482)
T ss_pred CCccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHH---------HhccCCc
Confidence 1444555554443321 122334456777777777766632221 12333444441 11111 1122223
Q ss_pred CcEEeCcCcccccc-CCccCcC-CCCCCEEECcCCcCc
Q 010663 313 LQIMDLAYNRLEGQ-IPESFDD-LTSLEVMNLSNNKIS 348 (505)
Q Consensus 313 L~~L~l~~n~l~~~-~~~~~~~-l~~L~~L~l~~n~l~ 348 (505)
++.|+++.+..... .-..... +..++.+++.++...
T Consensus 403 l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~ 440 (482)
T KOG1947|consen 403 LRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVI 440 (482)
T ss_pred cceEecccCccccccchHHHhhhhhccccCCccCcccc
Confidence 77888887764322 1111111 455666666666543
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.56 E-value=0.0061 Score=31.83 Aligned_cols=17 Identities=41% Similarity=0.606 Sum_probs=7.1
Q ss_pred CcEEEcccccccccCchh
Q 010663 18 LKIIILINNSLSGSLPSR 35 (505)
Q Consensus 18 L~~L~ls~n~~~~~ip~~ 35 (505)
|++||+++|.++ ++|.+
T Consensus 2 L~~Ldls~n~l~-~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSS 18 (22)
T ss_dssp ESEEEETSSEES-EEGTT
T ss_pred ccEEECCCCcCE-eCChh
Confidence 344444444444 44433
No 73
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.42 E-value=0.006 Score=31.87 Aligned_cols=18 Identities=44% Similarity=0.671 Sum_probs=7.9
Q ss_pred CCEEeccCCcccccCchhh
Q 010663 43 VEHLNLALNRFSGTIPSSI 61 (505)
Q Consensus 43 L~~L~l~~n~~~~~~~~~~ 61 (505)
|++|++++|+++ .+|..|
T Consensus 2 L~~Ldls~n~l~-~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSF 19 (22)
T ss_dssp ESEEEETSSEES-EEGTTT
T ss_pred ccEEECCCCcCE-eCChhh
Confidence 444444444444 344333
No 74
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=95.36 E-value=0.068 Score=51.49 Aligned_cols=18 Identities=39% Similarity=0.711 Sum_probs=16.0
Q ss_pred CeeecCCCceEEEEEcCC
Q 010663 487 NIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~L~~ 504 (505)
.+||+|+||.||||.|.+
T Consensus 216 eli~~Grfg~V~KaqL~~ 233 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDN 233 (534)
T ss_pred HHhhcCccceeehhhccC
Confidence 469999999999999865
No 75
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.21 E-value=0.00022 Score=70.74 Aligned_cols=162 Identities=27% Similarity=0.314 Sum_probs=76.9
Q ss_pred CCEEeccCccccCCCCCcccccccCCCCCCCEEECcCCCCCccCchHHhhc----cccccEEEeecCCccc----cCCcc
Q 010663 91 LAWLGLAYNNLTSSTSKLSFLSSLANCKKLRSLNFIGNPLDGFLPSSIGNL----SKSLETLGIANCSISG----NIPPA 162 (505)
Q Consensus 91 L~~L~L~~n~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l----~~~L~~L~l~~n~l~~----~~~~~ 162 (505)
+..+.|.+|.+.... ...+...+...+.|..|++++|.+.+.-...+... .+.+++|++..|.++. .+...
T Consensus 89 l~~L~L~~~~l~~~~-~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~ 167 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRG-AEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAV 167 (478)
T ss_pred HHHhhhhhCccccch-HHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHH
Confidence 566666666665441 11112455666777777777777763322222211 1345556666665543 23344
Q ss_pred ccCCCCCCEEEccCCcccc----ccCccc----cCCCCCCeEeccCccccccC----CccCCCCCC-CCeEeccCccccc
Q 010663 163 ISNLSNLLTLVLEGNKLTG----PIPTTF----GRLQKLQGLFLAFNKLVGSC----PDELCHLDR-LDKLVLLGNKFSG 229 (505)
Q Consensus 163 ~~~l~~L~~L~l~~n~~~~----~~~~~l----~~l~~L~~L~l~~n~~~~~~----~~~~~~~~~-L~~L~l~~n~l~~ 229 (505)
+.....++.++++.|.+.. .++..+ ....++++|++.+|.++... ...+...+. +.++++..|++.+
T Consensus 168 L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d 247 (478)
T KOG4308|consen 168 LEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGD 247 (478)
T ss_pred HhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcch
Confidence 4455666666666666531 111222 23455666666665554211 112223333 4445555555442
Q ss_pred c----cCccccCC-CCCCceeccCccCCC
Q 010663 230 S----IPSCLSNL-TSLRFLYLGSNRFTS 253 (505)
Q Consensus 230 ~----~~~~~~~l-~~L~~L~l~~n~~~~ 253 (505)
. ....+..+ ..++.++++.|.++.
T Consensus 248 ~g~~~L~~~l~~~~~~l~~l~l~~nsi~~ 276 (478)
T KOG4308|consen 248 VGVEKLLPCLSVLSETLRVLDLSRNSITE 276 (478)
T ss_pred HHHHHHHHHhcccchhhhhhhhhcCCccc
Confidence 1 12223333 344555555555543
No 76
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=93.99 E-value=0.12 Score=53.55 Aligned_cols=19 Identities=21% Similarity=0.571 Sum_probs=16.3
Q ss_pred ccCCeeecCCCceEEEEEc
Q 010663 484 AENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 484 ~~~~~iG~G~fG~VYkg~L 502 (505)
.+..+||+|+||+||||..
T Consensus 699 kk~kvLGsgAfGtV~kGiw 717 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIW 717 (1177)
T ss_pred hhhceeccccceeEEeeeE
Confidence 4457899999999999975
No 77
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=93.89 E-value=0.035 Score=26.83 Aligned_cols=13 Identities=38% Similarity=0.532 Sum_probs=5.7
Q ss_pred CCcEEEccccccc
Q 010663 17 TLKIIILINNSLS 29 (505)
Q Consensus 17 ~L~~L~ls~n~~~ 29 (505)
+|+.|++++|.++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555666665554
No 78
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=93.68 E-value=0.034 Score=56.08 Aligned_cols=24 Identities=29% Similarity=0.502 Sum_probs=21.6
Q ss_pred HHhCcccCCeeecCCCceEEEEEc
Q 010663 479 ATDNFAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 479 AT~~F~~~~~iG~G~fG~VYkg~L 502 (505)
.+++|...++||+|+||+||||.+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~ 166 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLR 166 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEe
Confidence 367899999999999999999975
No 79
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=93.57 E-value=0.0019 Score=55.82 Aligned_cols=92 Identities=18% Similarity=0.223 Sum_probs=63.6
Q ss_pred cCch-hhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCCCCCEEeccCccccCCCCCcc
Q 010663 31 SLPS-RIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLRNLAWLGLAYNNLTSSTSKLS 109 (505)
Q Consensus 31 ~ip~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 109 (505)
+||- ++. .....+.||++.|++. .+-..|..++.|..|+++.|.+. ..|.+++....++.+++..|..+..|
T Consensus 32 ~~~v~ei~-~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~~~p---- 104 (326)
T KOG0473|consen 32 EIPVREIA-SFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHSQQP---- 104 (326)
T ss_pred ccchhhhh-ccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchhhCC----
Confidence 4542 333 5677777888777775 45556666777777788777766 56777777777777777777777666
Q ss_pred cccccCCCCCCCEEECcCCCCC
Q 010663 110 FLSSLANCKKLRSLNFIGNPLD 131 (505)
Q Consensus 110 ~~~~l~~l~~L~~L~l~~n~~~ 131 (505)
.++...++++++++..|.+.
T Consensus 105 --~s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 105 --KSQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred --ccccccCCcchhhhccCcch
Confidence 56777777777777776644
No 80
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=93.45 E-value=0.0027 Score=54.97 Aligned_cols=89 Identities=15% Similarity=0.132 Sum_probs=76.7
Q ss_pred hhhhcCCCCcEEEcccccccccCchhhhcCCCCCCEEeccCCcccccCchhhhCCCCCCEEEccCCcCCccCcccccCCC
Q 010663 10 ATIFNMSTLKIIILINNSLSGSLPSRIGLSLPTVEHLNLALNRFSGTIPSSITNASKLTLLELGGNTFSGLIPDTIGNLR 89 (505)
Q Consensus 10 ~~~~~l~~L~~L~ls~n~~~~~ip~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~ 89 (505)
-.+..++....||++.|++. .+-..+. .+..|..|+++.|.+. .+|..++....++.++++.|..+ -.|.+++..+
T Consensus 36 ~ei~~~kr~tvld~~s~r~v-n~~~n~s-~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~ 111 (326)
T KOG0473|consen 36 REIASFKRVTVLDLSSNRLV-NLGKNFS-ILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEP 111 (326)
T ss_pred hhhhccceeeeehhhhhHHH-hhccchH-HHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccC
Confidence 45778899999999999987 5555565 5788999999999997 88999999999999999999887 5788999999
Q ss_pred CCCEEeccCcccc
Q 010663 90 NLAWLGLAYNNLT 102 (505)
Q Consensus 90 ~L~~L~L~~n~l~ 102 (505)
+++.+++-.|.+.
T Consensus 112 ~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 112 HPKKNEQKKTEFF 124 (326)
T ss_pred CcchhhhccCcch
Confidence 9999999887654
No 81
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.31 E-value=0.087 Score=54.08 Aligned_cols=35 Identities=34% Similarity=0.552 Sum_probs=27.1
Q ss_pred ccccHHHHHHHHhCccc---------CCeeecCCCceEEEEEcC
Q 010663 469 RRFSYLELLQATDNFAE---------NNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 469 ~~~~~~el~~AT~~F~~---------~~~iG~G~fG~VYkg~L~ 503 (505)
..++|+|=-+|...|.. +.+||.|-||.||+|.|.
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk 651 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLK 651 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceeccccc
Confidence 35678776677666643 468999999999999984
No 82
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.12 E-value=0.0013 Score=65.42 Aligned_cols=187 Identities=21% Similarity=0.215 Sum_probs=116.0
Q ss_pred CcEEEcccccccccCchhhhc---CCCCCCEEeccCCcccccCchhh----hCC-CCCCEEEccCCcCCcc----Ccccc
Q 010663 18 LKIIILINNSLSGSLPSRIGL---SLPTVEHLNLALNRFSGTIPSSI----TNA-SKLTLLELGGNTFSGL----IPDTI 85 (505)
Q Consensus 18 L~~L~ls~n~~~~~ip~~~~~---~l~~L~~L~l~~n~~~~~~~~~~----~~l-~~L~~L~l~~n~~~~~----~~~~l 85 (505)
+..|.|.+|.+...-...+.. ...+|+.|++++|.+.+.--..+ ... ..|++|++..|.+++. +.+.+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 677778888776543333221 56778888888888763322222 222 4567777777777654 34556
Q ss_pred cCCCCCCEEeccCccccCCCCCcccccc----cCCCCCCCEEECcCCCCCccCc----hHHhhccccccEEEeecCCccc
Q 010663 86 GNLRNLAWLGLAYNNLTSSTSKLSFLSS----LANCKKLRSLNFIGNPLDGFLP----SSIGNLSKSLETLGIANCSISG 157 (505)
Q Consensus 86 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~----l~~l~~L~~L~l~~n~~~~~~~----~~~~~l~~~L~~L~l~~n~l~~ 157 (505)
.....+++++++.|.+.... ....... +....++++|++.++.++.... ..+......+.+|++..|.+..
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g-~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d 247 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELG-LLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGD 247 (478)
T ss_pred hcccchhHHHHHhcccchhh-hHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcch
Confidence 66788888888888775320 0000022 3346788889998888763221 1222222236668888887763
Q ss_pred c----CCccccCC-CCCCEEEccCCcccccc----CccccCCCCCCeEeccCccccc
Q 010663 158 N----IPPAISNL-SNLLTLVLEGNKLTGPI----PTTFGRLQKLQGLFLAFNKLVG 205 (505)
Q Consensus 158 ~----~~~~~~~l-~~L~~L~l~~n~~~~~~----~~~l~~l~~L~~L~l~~n~~~~ 205 (505)
. ..+.+..+ ..+++++++.|.++..- ...+..++.++++.++.|.+..
T Consensus 248 ~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 248 VGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 3 23344445 67889999999987543 3445567899999999998764
No 83
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=92.84 E-value=0.05 Score=54.03 Aligned_cols=28 Identities=25% Similarity=0.337 Sum_probs=22.1
Q ss_pred cccHHHHHHHHhCcccCCeeecCCCceEEEEEcCC
Q 010663 470 RFSYLELLQATDNFAENNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 470 ~~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L~~ 504 (505)
.+.++|++.+. .||+|.||+||||...+
T Consensus 388 eIp~~ev~l~~-------rIGsGsFGtV~Rg~whG 415 (678)
T KOG0193|consen 388 EIPPEEVLLGE-------RIGSGSFGTVYRGRWHG 415 (678)
T ss_pred ccCHHHhhccc-------eeccccccceeeccccc
Confidence 45677776554 59999999999998754
No 84
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.51 E-value=0.11 Score=28.30 Aligned_cols=22 Identities=41% Similarity=0.457 Sum_probs=13.9
Q ss_pred CCCCcEEEcccccccccCchhhh
Q 010663 15 MSTLKIIILINNSLSGSLPSRIG 37 (505)
Q Consensus 15 l~~L~~L~ls~n~~~~~ip~~~~ 37 (505)
+++|++|+|++|.++ .+|...+
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLS-SLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHc
Confidence 356666777777666 6666554
No 85
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.51 E-value=0.11 Score=28.30 Aligned_cols=22 Identities=41% Similarity=0.457 Sum_probs=13.9
Q ss_pred CCCCcEEEcccccccccCchhhh
Q 010663 15 MSTLKIIILINNSLSGSLPSRIG 37 (505)
Q Consensus 15 l~~L~~L~ls~n~~~~~ip~~~~ 37 (505)
+++|++|+|++|.++ .+|...+
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLS-SLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHc
Confidence 356666777777666 6666554
No 86
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=92.37 E-value=0.073 Score=54.93 Aligned_cols=26 Identities=27% Similarity=0.516 Sum_probs=23.1
Q ss_pred HHhCcccCCeeecCCCceEEEEEcCC
Q 010663 479 ATDNFAENNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 479 AT~~F~~~~~iG~G~fG~VYkg~L~~ 504 (505)
++++|...+.||+|+||.||+|+..+
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~ 155 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVN 155 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcC
Confidence 67889999999999999999998753
No 87
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.09 E-value=0.57 Score=45.10 Aligned_cols=20 Identities=30% Similarity=0.559 Sum_probs=17.0
Q ss_pred CCeeecCCCceEEEEEcCCC
Q 010663 486 NNIIGRGGFGPFMEQDLKMG 505 (505)
Q Consensus 486 ~~~iG~G~fG~VYkg~L~~G 505 (505)
...||+|.||.|+||...++
T Consensus 216 ~e~IGkGRyGEVwrG~wrGe 235 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWRGE 235 (513)
T ss_pred EEEecCccccceeeccccCC
Confidence 45799999999999988753
No 88
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=88.62 E-value=0.19 Score=26.73 Aligned_cols=13 Identities=31% Similarity=0.557 Sum_probs=4.7
Q ss_pred CCCEEeccCCccc
Q 010663 42 TVEHLNLALNRFS 54 (505)
Q Consensus 42 ~L~~L~l~~n~~~ 54 (505)
+|++|+|++|.++
T Consensus 3 ~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 3 NLETLDLSNNQIT 15 (24)
T ss_dssp T-SEEE-TSSBEH
T ss_pred CCCEEEccCCcCC
Confidence 3444444444443
No 89
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=87.96 E-value=0.44 Score=25.82 Aligned_cols=12 Identities=42% Similarity=0.570 Sum_probs=4.8
Q ss_pred CCEEEccCCcCC
Q 010663 67 LTLLELGGNTFS 78 (505)
Q Consensus 67 L~~L~l~~n~~~ 78 (505)
|++|+|++|.++
T Consensus 4 L~~L~L~~N~l~ 15 (26)
T smart00369 4 LRELDLSNNQLS 15 (26)
T ss_pred CCEEECCCCcCC
Confidence 334444444333
No 90
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=87.96 E-value=0.44 Score=25.82 Aligned_cols=12 Identities=42% Similarity=0.570 Sum_probs=4.8
Q ss_pred CCEEEccCCcCC
Q 010663 67 LTLLELGGNTFS 78 (505)
Q Consensus 67 L~~L~l~~n~~~ 78 (505)
|++|+|++|.++
T Consensus 4 L~~L~L~~N~l~ 15 (26)
T smart00370 4 LRELDLSNNQLS 15 (26)
T ss_pred CCEEECCCCcCC
Confidence 334444444333
No 91
>PTZ00284 protein kinase; Provisional
Probab=86.33 E-value=0.27 Score=49.67 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=25.3
Q ss_pred HHHHHHHHhCcccCCeeecCCCceEEEEEcC
Q 010663 473 YLELLQATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 473 ~~el~~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
.+++..++++|.-..+||+|+||+||+|...
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~ 151 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDR 151 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEc
Confidence 3455566788988899999999999999753
No 92
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=84.54 E-value=0.34 Score=52.53 Aligned_cols=24 Identities=29% Similarity=0.751 Sum_probs=19.6
Q ss_pred HHHhCcccCCeeecCCCceEEEEE
Q 010663 478 QATDNFAENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 478 ~AT~~F~~~~~iG~G~fG~VYkg~ 501 (505)
+.-++|.+-.++|+||||.|||++
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVR 499 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVR 499 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEe
Confidence 344567777899999999999975
No 93
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=83.06 E-value=0.7 Score=45.80 Aligned_cols=17 Identities=35% Similarity=0.751 Sum_probs=15.6
Q ss_pred CeeecCCCceEEEEEcC
Q 010663 487 NIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~L~ 503 (505)
..||+|+||.||+|++.
T Consensus 163 kkLGeGaFGeV~~G~l~ 179 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLK 179 (474)
T ss_pred ceeecccccEEEEEEEE
Confidence 57999999999999984
No 94
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.89 E-value=0.21 Score=42.70 Aligned_cols=82 Identities=18% Similarity=0.196 Sum_probs=52.7
Q ss_pred CCCEEeccCCcccccCchhhhCCCCCCEEEccCCc-CCccCccccc-CCCCCCEEeccCcc-ccCCCCCcccccccCCCC
Q 010663 42 TVEHLNLALNRFSGTIPSSITNASKLTLLELGGNT-FSGLIPDTIG-NLRNLAWLGLAYNN-LTSSTSKLSFLSSLANCK 118 (505)
Q Consensus 42 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~l~-~l~~L~~L~L~~n~-l~~~~~~~~~~~~l~~l~ 118 (505)
.++.++-+++.|...--+.+.+++.++.|.+.+|. +.+.--+.++ -.++|+.|+++.|. |++.. +..+..++
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~G-----L~~L~~lk 176 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGG-----LACLLKLK 176 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhH-----HHHHHHhh
Confidence 46788888888876656677788888888888774 2221111122 25788999998774 44331 14456677
Q ss_pred CCCEEECcCC
Q 010663 119 KLRSLNFIGN 128 (505)
Q Consensus 119 ~L~~L~l~~n 128 (505)
+|+.|.+.+-
T Consensus 177 nLr~L~l~~l 186 (221)
T KOG3864|consen 177 NLRRLHLYDL 186 (221)
T ss_pred hhHHHHhcCc
Confidence 7777777654
No 95
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.87 E-value=0.23 Score=42.48 Aligned_cols=82 Identities=21% Similarity=0.173 Sum_probs=37.8
Q ss_pred CCCCEEEccCCccccccCccccCCCCCCeEeccCccccccC-CccCC-CCCCCCeEeccCcc-cccccCccccCCCCCCc
Q 010663 167 SNLLTLVLEGNKLTGPIPTTFGRLQKLQGLFLAFNKLVGSC-PDELC-HLDRLDKLVLLGNK-FSGSIPSCLSNLTSLRF 243 (505)
Q Consensus 167 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~-~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~ 243 (505)
..++.+|-+++.+..+--+.+..++.++.|.+.++.-.+.. -+.++ -.++|+.|++++|. ++..--..+..+++|+.
T Consensus 101 ~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred ceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 34555555555555444444555555555555554322110 00111 23455666666543 33222233445555555
Q ss_pred eeccC
Q 010663 244 LYLGS 248 (505)
Q Consensus 244 L~l~~ 248 (505)
|.+.+
T Consensus 181 L~l~~ 185 (221)
T KOG3864|consen 181 LHLYD 185 (221)
T ss_pred HHhcC
Confidence 55543
No 96
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=80.90 E-value=0.83 Score=44.58 Aligned_cols=32 Identities=25% Similarity=0.439 Sum_probs=26.6
Q ss_pred cHHHHHHHHhCcccCCeeecCCCceEEEEEcC
Q 010663 472 SYLELLQATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 472 ~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
.++++..+.++|.-...||+|+||.||++.-.
T Consensus 34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~ 65 (371)
T cd05622 34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHK 65 (371)
T ss_pred HHhhcCcchhhcEEEEEEeecCCeEEEEEEEC
Confidence 35566677788998999999999999998764
No 97
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=80.85 E-value=0.55 Score=43.51 Aligned_cols=20 Identities=25% Similarity=0.453 Sum_probs=16.5
Q ss_pred CcccCCeeecCCCceEEEEE
Q 010663 482 NFAENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 482 ~F~~~~~iG~G~fG~VYkg~ 501 (505)
+|..-|.|++|.||.||||.
T Consensus 77 efe~lnrI~EGtyGiVYRak 96 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAK 96 (419)
T ss_pred HHHHHhhcccCcceeEEEec
Confidence 34445889999999999996
No 98
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=79.27 E-value=0.88 Score=46.88 Aligned_cols=34 Identities=9% Similarity=0.206 Sum_probs=24.9
Q ss_pred ccHHHHHHHHhCcccCCeeecCCCceEEEEEcCC
Q 010663 471 FSYLELLQATDNFAENNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 471 ~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L~~ 504 (505)
.++......+..|...++||+|+||+||+|...+
T Consensus 323 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~ 356 (535)
T PRK09605 323 VTWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLG 356 (535)
T ss_pred eeeccccccccccCccceeccCCcEEEEEEeecC
Confidence 3444444555566778899999999999988754
No 99
>PTZ00036 glycogen synthase kinase; Provisional
Probab=78.96 E-value=1.2 Score=44.73 Aligned_cols=24 Identities=33% Similarity=0.523 Sum_probs=19.9
Q ss_pred HhCcccCCeeecCCCceEEEEEcC
Q 010663 480 TDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 480 T~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
+..|.-..+||+|+||+||+|+..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~ 88 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI 88 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC
Confidence 345777789999999999999864
No 100
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=78.93 E-value=1 Score=43.87 Aligned_cols=28 Identities=29% Similarity=0.506 Sum_probs=22.0
Q ss_pred HHHHHhCcccCCeeecCCCceEEEEEcC
Q 010663 476 LLQATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 476 l~~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
+...+++|.-..+||+|+||.||++.-.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~ 65 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHK 65 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEEC
Confidence 3344566777789999999999998764
No 101
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=78.51 E-value=1.1 Score=48.59 Aligned_cols=20 Identities=25% Similarity=0.492 Sum_probs=17.0
Q ss_pred cCCeeecCCCceEEEEEcCC
Q 010663 485 ENNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 485 ~~~~iG~G~fG~VYkg~L~~ 504 (505)
-.+.||+|+||.||+|++.+
T Consensus 696 l~~~lG~G~FG~VY~g~~~~ 715 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSD 715 (1025)
T ss_pred eeeeeccccccceEEEEEec
Confidence 34679999999999999854
No 102
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=76.69 E-value=0.97 Score=44.10 Aligned_cols=26 Identities=31% Similarity=0.530 Sum_probs=21.1
Q ss_pred HHHhCcccCCeeecCCCceEEEEEcC
Q 010663 478 QATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 478 ~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
...++|.-...||+|+||.||+|.-.
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~ 65 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHK 65 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEEC
Confidence 34567777789999999999998754
No 103
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=76.16 E-value=1.4 Score=42.55 Aligned_cols=17 Identities=24% Similarity=0.630 Sum_probs=14.9
Q ss_pred eeecCCCceEEEEEcCC
Q 010663 488 IIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 488 ~iG~G~fG~VYkg~L~~ 504 (505)
.||+|+||+||||...+
T Consensus 48 ~iG~G~~g~V~~~~~~g 64 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRG 64 (362)
T ss_pred hcccCCceeEEEEEeCC
Confidence 49999999999998754
No 104
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=76.02 E-value=1.4 Score=42.95 Aligned_cols=20 Identities=30% Similarity=0.605 Sum_probs=16.5
Q ss_pred CcccCCeeecCCCceEEEEE
Q 010663 482 NFAENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 482 ~F~~~~~iG~G~fG~VYkg~ 501 (505)
+|.-.+.||+|+||.||+|+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~ 58 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEAT 58 (374)
T ss_pred HceehheecCCCcccEEEEE
Confidence 35555789999999999986
No 105
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=75.07 E-value=1.7 Score=42.80 Aligned_cols=20 Identities=30% Similarity=0.607 Sum_probs=16.0
Q ss_pred cccCCeeecCCCceEEEEEc
Q 010663 483 FAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 483 F~~~~~iG~G~fG~VYkg~L 502 (505)
|.-.++||+|+||.||+|+.
T Consensus 39 ~~~~~~LG~G~fG~Vy~~~~ 58 (400)
T cd05105 39 LVLGRILGSGAFGKVVEGTA 58 (400)
T ss_pred eehhheecCCCCceEEEEEE
Confidence 33346799999999999974
No 106
>PHA03209 serine/threonine kinase US3; Provisional
Probab=73.51 E-value=2.3 Score=41.17 Aligned_cols=26 Identities=12% Similarity=0.086 Sum_probs=21.6
Q ss_pred HHHhCcccCCeeecCCCceEEEEEcC
Q 010663 478 QATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 478 ~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
.+..+|.-...||+|+||.||+|...
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~ 88 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKP 88 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEEC
Confidence 34567888889999999999999864
No 107
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=72.89 E-value=2.2 Score=23.13 Aligned_cols=17 Identities=47% Similarity=0.653 Sum_probs=10.9
Q ss_pred CCcEEEcccccccccCch
Q 010663 17 TLKIIILINNSLSGSLPS 34 (505)
Q Consensus 17 ~L~~L~ls~n~~~~~ip~ 34 (505)
+|+.|++++|.++ ++|+
T Consensus 3 ~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLT-SLPE 19 (26)
T ss_pred ccceeecCCCccc-cCcc
Confidence 4666777777766 5554
No 108
>PHA03211 serine/threonine kinase US3; Provisional
Probab=72.51 E-value=2.6 Score=42.38 Aligned_cols=23 Identities=22% Similarity=0.229 Sum_probs=19.3
Q ss_pred CcccCCeeecCCCceEEEEEcCC
Q 010663 482 NFAENNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 482 ~F~~~~~iG~G~fG~VYkg~L~~ 504 (505)
+|.-...||+|+||.||+|..+.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~ 192 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPD 192 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECC
Confidence 57777789999999999998653
No 109
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=72.47 E-value=1.9 Score=42.53 Aligned_cols=20 Identities=25% Similarity=0.516 Sum_probs=16.3
Q ss_pred ccCCeeecCCCceEEEEEcC
Q 010663 484 AENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 484 ~~~~~iG~G~fG~VYkg~L~ 503 (505)
.-...||+|+||.||+|+..
T Consensus 40 ~~~~~lG~G~fG~Vy~~~~~ 59 (401)
T cd05107 40 VLGRTLGSGAFGRVVEATAH 59 (401)
T ss_pred ehhhhccCCCceeEEEEEEc
Confidence 33467999999999999853
No 110
>PHA03210 serine/threonine kinase US3; Provisional
Probab=72.17 E-value=2.2 Score=43.59 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=19.3
Q ss_pred HhCcccCCeeecCCCceEEEEEc
Q 010663 480 TDNFAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 480 T~~F~~~~~iG~G~fG~VYkg~L 502 (505)
.+.|.-...||+|+||+||++..
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~ 169 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICAL 169 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEE
Confidence 45677778999999999998764
No 111
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=71.81 E-value=8.1 Score=37.01 Aligned_cols=31 Identities=16% Similarity=0.167 Sum_probs=22.8
Q ss_pred HHHHHHHhCcccCCeeecCCCceEEEEEcCC
Q 010663 474 LELLQATDNFAENNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 474 ~el~~AT~~F~~~~~iG~G~fG~VYkg~L~~ 504 (505)
+||...-..|.-..++-+|-||.||+|.+.+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~e 307 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWRE 307 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecc
Confidence 3444444557777789999999999997753
No 112
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=70.87 E-value=3.2 Score=22.58 Aligned_cols=16 Identities=31% Similarity=0.347 Sum_probs=8.7
Q ss_pred CCCCEEeccCccccCC
Q 010663 89 RNLAWLGLAYNNLTSS 104 (505)
Q Consensus 89 ~~L~~L~L~~n~l~~~ 104 (505)
++|++|+++.|.|+.+
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 4555666666655433
No 113
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=70.41 E-value=2.8 Score=41.56 Aligned_cols=25 Identities=32% Similarity=0.554 Sum_probs=20.3
Q ss_pred HHhCcccCCeeecCCCceEEEEEcC
Q 010663 479 ATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 479 AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
..++|.--.+||+||||.||-+.=.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk 163 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKK 163 (550)
T ss_pred CcccchhheeeccccceeEEEEEEc
Confidence 4467777789999999999987643
No 114
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=70.36 E-value=1.9 Score=43.61 Aligned_cols=19 Identities=26% Similarity=0.487 Sum_probs=16.4
Q ss_pred CCeeecCCCceEEEEEcCC
Q 010663 486 NNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 486 ~~~iG~G~fG~VYkg~L~~ 504 (505)
.++||.|-||.||+|+..+
T Consensus 394 ~r~iG~GqFGdVy~gvYt~ 412 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTD 412 (974)
T ss_pred HHhhcCCcccceeeeEecc
Confidence 4689999999999999753
No 115
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=70.26 E-value=1.3 Score=43.54 Aligned_cols=15 Identities=27% Similarity=0.609 Sum_probs=13.6
Q ss_pred CeeecCCCceEEEEE
Q 010663 487 NIIGRGGFGPFMEQD 501 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~ 501 (505)
..||+|.||.||||.
T Consensus 123 ~kIGeGTyg~VYkAr 137 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKAR 137 (560)
T ss_pred HHhcCcchhheeEee
Confidence 469999999999986
No 116
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=70.24 E-value=2.7 Score=40.85 Aligned_cols=27 Identities=26% Similarity=0.625 Sum_probs=20.4
Q ss_pred HHHH-hCcccCCeeecCCCceEEEEEcC
Q 010663 477 LQAT-DNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 477 ~~AT-~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
+-.| +.|+.-++||+||||.||-....
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvr 207 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVR 207 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEe
Confidence 3344 34888899999999999976543
No 117
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=66.68 E-value=2.8 Score=40.51 Aligned_cols=17 Identities=29% Similarity=0.335 Sum_probs=14.9
Q ss_pred CeeecCCCceEEEEEcC
Q 010663 487 NIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~L~ 503 (505)
..||+|+||+||+|+..
T Consensus 80 ~~lg~G~~g~V~~~~~~ 96 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHR 96 (353)
T ss_pred hhccCCCCeEEEEEEEC
Confidence 57999999999999753
No 118
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=65.08 E-value=5.8 Score=41.66 Aligned_cols=19 Identities=26% Similarity=0.499 Sum_probs=15.9
Q ss_pred ccCCeeecCCCceEEEEEc
Q 010663 484 AENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 484 ~~~~~iG~G~fG~VYkg~L 502 (505)
...+.+|+|+||+||-|.=
T Consensus 997 t~~relg~gsfg~Vy~g~~ 1015 (1025)
T KOG4258|consen 997 TLGRELGQGSFGMVYEGNA 1015 (1025)
T ss_pred hhhhhhccCccceEEEecC
Confidence 3457899999999999864
No 119
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=62.14 E-value=4.7 Score=41.29 Aligned_cols=24 Identities=38% Similarity=0.735 Sum_probs=20.3
Q ss_pred HhCcccCCeeecCCCceEEEEEcC
Q 010663 480 TDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 480 T~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
-++|.--.++|+|.||+||.+.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k 390 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELK 390 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEc
Confidence 356777789999999999999875
No 120
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=61.21 E-value=2.3 Score=40.70 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=20.6
Q ss_pred HHHhCcccCCeeecCCCceEEEEEcC
Q 010663 478 QATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 478 ~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
..-+.|...++||+|.|++||+|++.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~ 58 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDI 58 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHh
Confidence 33455677789999999999999763
No 121
>PHA03212 serine/threonine kinase US3; Provisional
Probab=59.81 E-value=5.3 Score=39.27 Aligned_cols=22 Identities=14% Similarity=-0.044 Sum_probs=18.4
Q ss_pred hCcccCCeeecCCCceEEEEEc
Q 010663 481 DNFAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 481 ~~F~~~~~iG~G~fG~VYkg~L 502 (505)
++|.-...||+|+||.||++.-
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d 113 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACID 113 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEE
Confidence 4577778899999999999864
No 122
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=59.05 E-value=5.4 Score=43.38 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=21.7
Q ss_pred HHHhCcccCCeeecCCCceEEEEEcCCC
Q 010663 478 QATDNFAENNIIGRGGFGPFMEQDLKMG 505 (505)
Q Consensus 478 ~AT~~F~~~~~iG~G~fG~VYkg~L~~G 505 (505)
..-..|.=+..||+|+||+||+|+=.+|
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~ 722 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNG 722 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCC
Confidence 3344577778899999999999986553
No 123
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=58.70 E-value=40 Score=33.33 Aligned_cols=106 Identities=14% Similarity=0.026 Sum_probs=50.1
Q ss_pred CCCEEEccCCccccccCcc--ccCCCCCCeEeccCcccccc-CCccCC--------CCCCCCeEeccCcccccccC---c
Q 010663 168 NLLTLVLEGNKLTGPIPTT--FGRLQKLQGLFLAFNKLVGS-CPDELC--------HLDRLDKLVLLGNKFSGSIP---S 233 (505)
Q Consensus 168 ~L~~L~l~~n~~~~~~~~~--l~~l~~L~~L~l~~n~~~~~-~~~~~~--------~~~~L~~L~l~~n~l~~~~~---~ 233 (505)
.+|+|.+..|.+.+..-.. +..-+..+.+++..-.-... .+.... ...-+..+.++.+.+..... .
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 4677777777766544332 22334555555543221000 000000 11235666777766653222 2
Q ss_pred cccCCCCCCceeccCccCCC----CCCccccCCCCCCEEEccCC
Q 010663 234 CLSNLTSLRFLYLGSNRFTS----VIPSTFWRLKDILFLDFSSN 273 (505)
Q Consensus 234 ~~~~l~~L~~L~l~~n~~~~----~~~~~~~~~~~L~~L~l~~n 273 (505)
.+..-+.+..|++++|.... .+|.....-..++.+..+.|
T Consensus 435 ~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n 478 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLN 478 (553)
T ss_pred hhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCC
Confidence 23445677888888876543 23344433344444444443
No 124
>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A ....
Probab=58.70 E-value=11 Score=26.96 Aligned_cols=18 Identities=28% Similarity=0.368 Sum_probs=14.2
Q ss_pred ccccHHHHHHHHhCcccC
Q 010663 469 RRFSYLELLQATDNFAEN 486 (505)
Q Consensus 469 ~~~~~~el~~AT~~F~~~ 486 (505)
..+||+|=.+|-..|..+
T Consensus 55 DP~TYEDP~qAV~eFAkE 72 (75)
T PF14575_consen 55 DPHTYEDPNQAVREFAKE 72 (75)
T ss_dssp -GGGSSSHHHHHHHCSSB
T ss_pred CcccccCHHHHHHHHHhh
Confidence 357899999999999754
No 125
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=57.99 E-value=7.9 Score=21.35 Aligned_cols=14 Identities=36% Similarity=0.536 Sum_probs=8.6
Q ss_pred CCCCEEECcCCCCC
Q 010663 118 KKLRSLNFIGNPLD 131 (505)
Q Consensus 118 ~~L~~L~l~~n~~~ 131 (505)
++|++|+|++|.+.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 35666666666664
No 126
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=57.81 E-value=3.5 Score=41.11 Aligned_cols=64 Identities=27% Similarity=0.290 Sum_probs=30.5
Q ss_pred CCCCCCEEEccCCcCCcc--CcccccCCCCCCEEeccCc--cccCCCCCcccccccCCCCCCCEEECcCCCCC
Q 010663 63 NASKLTLLELGGNTFSGL--IPDTIGNLRNLAWLGLAYN--NLTSSTSKLSFLSSLANCKKLRSLNFIGNPLD 131 (505)
Q Consensus 63 ~l~~L~~L~l~~n~~~~~--~~~~l~~l~~L~~L~L~~n--~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~ 131 (505)
+.+.+..++|++|++... +...-...++|+.|+|++| .+...++. ..++ ...|++|-+.+|++.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el----~K~k-~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESEL----DKLK-GLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhh----hhhc-CCCHHHeeecCCccc
Confidence 444555555666554422 1111123466666666666 33222110 1122 234667777777765
No 127
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=57.56 E-value=6.1 Score=39.44 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=20.2
Q ss_pred hCcccCCeeecCCCceEEEEEcCCC
Q 010663 481 DNFAENNIIGRGGFGPFMEQDLKMG 505 (505)
Q Consensus 481 ~~F~~~~~iG~G~fG~VYkg~L~~G 505 (505)
..|++ ..||.|++|.||||++.+|
T Consensus 118 ~~fd~-~plasaSigQVh~A~l~~G 141 (437)
T TIGR01982 118 AEFEE-KPLAAASIAQVHRARLVDG 141 (437)
T ss_pred hhCCC-cceeeeehhheEEEEecCC
Confidence 44554 6799999999999999887
No 128
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=51.45 E-value=94 Score=30.90 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=32.9
Q ss_pred CCcEEeCcCccccccCC---ccCcCCCCCCEEECcCCcCcc----cCCccccCCCCCCEEeCcCCc
Q 010663 312 SLQIMDLAYNRLEGQIP---ESFDDLTSLEVMNLSNNKISG----SIPKSMEKLFYLRELNLSFNE 370 (505)
Q Consensus 312 ~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~l~l~~n~ 370 (505)
-+..+.++.|.+..... ..+..-+.+..|++++|.... .+|..+.....++.+..+.|.
T Consensus 414 ~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~ 479 (553)
T KOG4242|consen 414 VLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNL 479 (553)
T ss_pred cccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCC
Confidence 35666777776543221 223344667788888876542 344555555556665555553
No 129
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=51.31 E-value=4.2 Score=42.66 Aligned_cols=18 Identities=22% Similarity=0.422 Sum_probs=15.7
Q ss_pred CeeecCCCceEEEEEcCC
Q 010663 487 NIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~L~~ 504 (505)
..||+|.||+||+|+.++
T Consensus 492 ~eLGegaFGkVf~a~~~~ 509 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYG 509 (774)
T ss_pred hhhcCchhhhhhhhhccC
Confidence 459999999999998864
No 130
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=48.86 E-value=7.3 Score=38.80 Aligned_cols=19 Identities=32% Similarity=0.725 Sum_probs=15.9
Q ss_pred cccCCeeecCCCceEEEEEc
Q 010663 483 FAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 483 F~~~~~iG~G~fG~VYkg~L 502 (505)
|.+ .++|.|-||+||-|.-
T Consensus 567 f~d-evLGSGQFG~VYgg~h 585 (888)
T KOG4236|consen 567 FAD-EVLGSGQFGTVYGGKH 585 (888)
T ss_pred hhH-hhccCCcceeeeccee
Confidence 554 5899999999998864
No 131
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=48.85 E-value=15 Score=34.81 Aligned_cols=27 Identities=22% Similarity=0.324 Sum_probs=21.3
Q ss_pred cccHHHHHHHHhCcccCCeeecCCCceEEEEEcC
Q 010663 470 RFSYLELLQATDNFAENNIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 470 ~~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L~ 503 (505)
.++..||++. ++||+|..|+|||+...
T Consensus 75 ~i~~~dle~~-------~~lG~G~gG~V~kv~Hk 101 (364)
T KOG0581|consen 75 GISLSDLERL-------GVLGSGNGGTVYKVRHK 101 (364)
T ss_pred ccCHHHhhhh-------hhcccCCCcEEEEEEEc
Confidence 4677777653 57999999999998764
No 132
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=48.45 E-value=6.1 Score=35.72 Aligned_cols=25 Identities=28% Similarity=0.387 Sum_probs=17.5
Q ss_pred cccHHHHHHHHhCcccCCeeecCCCceEEEEE
Q 010663 470 RFSYLELLQATDNFAENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 470 ~~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~ 501 (505)
.|+-++|+.- -.||.|+||+|||=.
T Consensus 60 ~F~~~~Lqdl-------g~iG~G~fG~V~KM~ 84 (361)
T KOG1006|consen 60 TFTSDNLQDL-------GEIGNGAFGTVNKML 84 (361)
T ss_pred ccccchHHHH-------HHhcCCcchhhhhhh
Confidence 4555555443 359999999999843
No 133
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=48.09 E-value=6.7 Score=31.96 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=7.3
Q ss_pred HhCcccCCeeec
Q 010663 480 TDNFAENNIIGR 491 (505)
Q Consensus 480 T~~F~~~~~iG~ 491 (505)
+++|..+.-+|.
T Consensus 111 ~~~y~s~splg~ 122 (154)
T PF04478_consen 111 SDKYESNSPLGS 122 (154)
T ss_pred ccccccCCCCCC
Confidence 466666666665
No 134
>PHA03207 serine/threonine kinase US3; Provisional
Probab=46.14 E-value=12 Score=36.68 Aligned_cols=21 Identities=10% Similarity=0.069 Sum_probs=17.2
Q ss_pred CcccCCeeecCCCceEEEEEc
Q 010663 482 NFAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 482 ~F~~~~~iG~G~fG~VYkg~L 502 (505)
.|.-...||+|+||.||++.-
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~ 113 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTK 113 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEE
Confidence 455567899999999999864
No 135
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=45.05 E-value=2.7 Score=40.64 Aligned_cols=15 Identities=33% Similarity=0.769 Sum_probs=13.2
Q ss_pred CeeecCCCceEEEEE
Q 010663 487 NIIGRGGFGPFMEQD 501 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~ 501 (505)
+++|+|||..||||.
T Consensus 469 hLLGrGGFSEVyKAF 483 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAF 483 (775)
T ss_pred HHhccccHHHHHHhc
Confidence 579999999999973
No 136
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=39.10 E-value=22 Score=18.99 Aligned_cols=13 Identities=38% Similarity=0.818 Sum_probs=8.0
Q ss_pred CCCCCEEECcCCC
Q 010663 117 CKKLRSLNFIGNP 129 (505)
Q Consensus 117 l~~L~~L~l~~n~ 129 (505)
+++|++|+++++.
T Consensus 1 c~~L~~L~l~~C~ 13 (26)
T smart00367 1 CPNLRELDLSGCT 13 (26)
T ss_pred CCCCCEeCCCCCC
Confidence 3566666666664
No 137
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=37.74 E-value=47 Score=20.18 Aligned_cols=7 Identities=14% Similarity=0.055 Sum_probs=3.0
Q ss_pred HHhhhhh
Q 010663 442 LKSKLIE 448 (505)
Q Consensus 442 ~~~~~~~ 448 (505)
.++||..
T Consensus 29 iYRKw~a 35 (43)
T PF08114_consen 29 IYRKWQA 35 (43)
T ss_pred HHHHHHH
Confidence 4444443
No 138
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=37.71 E-value=19 Score=36.27 Aligned_cols=67 Identities=28% Similarity=0.272 Sum_probs=42.9
Q ss_pred hhcCCCCCCEEeccCCccccc--CchhhhCCCCCCEEEccCC--cCCccCcccccC--CCCCCEEeccCccccCC
Q 010663 36 IGLSLPTVEHLNLALNRFSGT--IPSSITNASKLTLLELGGN--TFSGLIPDTIGN--LRNLAWLGLAYNNLTSS 104 (505)
Q Consensus 36 ~~~~l~~L~~L~l~~n~~~~~--~~~~~~~l~~L~~L~l~~n--~~~~~~~~~l~~--l~~L~~L~L~~n~l~~~ 104 (505)
+..+.+.+..++|++|++... +..--...++|+.|+|++| .+.. ...+.+ ...|++|.+.+|.+...
T Consensus 213 ~~~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~--~~el~K~k~l~Leel~l~GNPlc~t 285 (585)
T KOG3763|consen 213 IEENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISS--ESELDKLKGLPLEELVLEGNPLCTT 285 (585)
T ss_pred hhcCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcc--hhhhhhhcCCCHHHeeecCCccccc
Confidence 344677888888888877522 2222345678899999988 3332 222333 34578899999987654
No 139
>PF15102 TMEM154: TMEM154 protein family
Probab=37.11 E-value=34 Score=27.82 Aligned_cols=9 Identities=22% Similarity=0.139 Sum_probs=4.9
Q ss_pred cccHHHHHH
Q 010663 470 RFSYLELLQ 478 (505)
Q Consensus 470 ~~~~~el~~ 478 (505)
.+.++||.+
T Consensus 124 eiEmeeldk 132 (146)
T PF15102_consen 124 EIEMEELDK 132 (146)
T ss_pred hhhHHHHHh
Confidence 455666644
No 140
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=35.98 E-value=21 Score=35.82 Aligned_cols=22 Identities=18% Similarity=0.504 Sum_probs=17.6
Q ss_pred HhCcccCCeeecCCCceEEEEE
Q 010663 480 TDNFAENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 480 T~~F~~~~~iG~G~fG~VYkg~ 501 (505)
-++|.-..+||+|+|.+||+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~ 93 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAR 93 (604)
T ss_pred hhhcchhheeccccceeEEEee
Confidence 3455556689999999999986
No 141
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=34.52 E-value=30 Score=35.46 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=20.5
Q ss_pred hCcccCCeeecCCCceEEEEEcCC-C
Q 010663 481 DNFAENNIIGRGGFGPFMEQDLKM-G 505 (505)
Q Consensus 481 ~~F~~~~~iG~G~fG~VYkg~L~~-G 505 (505)
..|+. .-||.|++|.||+|++.+ |
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G 144 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNG 144 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCC
Confidence 45776 689999999999999987 5
No 142
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=34.07 E-value=21 Score=34.59 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=22.2
Q ss_pred ccHHHHHHHHhCcccCCeeecCCCceEEEEEc
Q 010663 471 FSYLELLQATDNFAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 471 ~~~~el~~AT~~F~~~~~iG~G~fG~VYkg~L 502 (505)
.+-.+..+|| +|+--.+||+|+||+|.-|+=
T Consensus 340 ~~~~d~i~~t-DFnFl~VlGKGSFGKVlLaer 370 (683)
T KOG0696|consen 340 SSKRDRIKAT-DFNFLMVLGKGSFGKVLLAER 370 (683)
T ss_pred CCcccceeec-ccceEEEeccCccceeeeecc
Confidence 3444555666 366678999999999987653
No 143
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=33.92 E-value=23 Score=35.91 Aligned_cols=20 Identities=10% Similarity=0.192 Sum_probs=16.3
Q ss_pred cccCCeeecCCCceEEEEEc
Q 010663 483 FAENNIIGRGGFGPFMEQDL 502 (505)
Q Consensus 483 F~~~~~iG~G~fG~VYkg~L 502 (505)
|.-.++||+|+||.||+|.-
T Consensus 69 y~~~~~lg~G~~g~vy~a~~ 88 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATR 88 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEE
Confidence 44457899999999999863
No 144
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=33.16 E-value=24 Score=36.78 Aligned_cols=17 Identities=24% Similarity=0.659 Sum_probs=14.4
Q ss_pred cCCeeecCCCceEEEEE
Q 010663 485 ENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 485 ~~~~iG~G~fG~VYkg~ 501 (505)
+.-++|+|-||+||-|+
T Consensus 579 ervVLGKGTYG~VYA~R 595 (1226)
T KOG4279|consen 579 ERVVLGKGTYGTVYAAR 595 (1226)
T ss_pred ceEEeecCceeEEEeec
Confidence 34579999999999886
No 145
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=32.41 E-value=21 Score=35.43 Aligned_cols=18 Identities=22% Similarity=0.333 Sum_probs=15.5
Q ss_pred CeeecCCCceEEEEEcCC
Q 010663 487 NIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~L~~ 504 (505)
+.||+|-||.||.|.+.+
T Consensus 212 ~~LG~G~FG~V~~g~~~~ 229 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNG 229 (468)
T ss_pred HHhcCCccceEEEEEEcC
Confidence 469999999999998753
No 146
>PF09919 DUF2149: Uncharacterized conserved protein (DUF2149); InterPro: IPR018676 This family of conserved hypothetical proteins has no known function.
Probab=30.43 E-value=29 Score=25.83 Aligned_cols=14 Identities=43% Similarity=0.700 Sum_probs=11.0
Q ss_pred ecC-CCceEEEEEcCCC
Q 010663 490 GRG-GFGPFMEQDLKMG 505 (505)
Q Consensus 490 G~G-~fG~VYkg~L~~G 505 (505)
|+| .-|+||| ++||
T Consensus 71 G~G~~~G~aYr--l~~G 85 (92)
T PF09919_consen 71 GSGERLGTAYR--LKDG 85 (92)
T ss_pred CCCeECeEEEE--cCCc
Confidence 555 5799999 8877
No 147
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=28.23 E-value=26 Score=35.83 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=12.9
Q ss_pred eeecCCCceEEEEE
Q 010663 488 IIGRGGFGPFMEQD 501 (505)
Q Consensus 488 ~iG~G~fG~VYkg~ 501 (505)
+||+|+|=+||||.
T Consensus 47 vLGrGafKtVYka~ 60 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAF 60 (632)
T ss_pred hcccccceeeeecc
Confidence 59999999999985
No 148
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=24.95 E-value=44 Score=35.42 Aligned_cols=19 Identities=16% Similarity=0.347 Sum_probs=16.0
Q ss_pred CCeeecCCCceEEEEEcCC
Q 010663 486 NNIIGRGGFGPFMEQDLKM 504 (505)
Q Consensus 486 ~~~iG~G~fG~VYkg~L~~ 504 (505)
+++|-+|||+.||-+....
T Consensus 42 ~~vLAEGGFa~VYla~~~~ 60 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVK 60 (738)
T ss_pred EEEEccCCcEEEEEEEecC
Confidence 3689999999999998754
No 149
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=24.15 E-value=47 Score=40.56 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=24.2
Q ss_pred eCcCccccccCCccCcCCCCCCEEECcCCcCc
Q 010663 317 DLAYNRLEGQIPESFDDLTSLEVMNLSNNKIS 348 (505)
Q Consensus 317 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 348 (505)
||++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 57788887666667777888888888887765
No 150
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=24.14 E-value=44 Score=35.13 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=15.1
Q ss_pred CeeecCCCceEEEEEcC
Q 010663 487 NIIGRGGFGPFMEQDLK 503 (505)
Q Consensus 487 ~~iG~G~fG~VYkg~L~ 503 (505)
..+|+|.||.|+||.+.
T Consensus 302 ~~lg~g~fG~v~~~~~~ 318 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLF 318 (609)
T ss_pred ceeecccccceEeEEEe
Confidence 38999999999999874
No 151
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=23.71 E-value=42 Score=30.60 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=14.5
Q ss_pred ccCCeeecCCCceEEEEE
Q 010663 484 AENNIIGRGGFGPFMEQD 501 (505)
Q Consensus 484 ~~~~~iG~G~fG~VYkg~ 501 (505)
..++-||.|+||.|+-.+
T Consensus 56 ~PDRPIGYGAFGVVWsVT 73 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVT 73 (449)
T ss_pred CCCCcccccceeEEEecc
Confidence 356789999999999544
No 152
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=20.61 E-value=41 Score=35.22 Aligned_cols=16 Identities=25% Similarity=0.603 Sum_probs=14.3
Q ss_pred eeecCCCceEEEEEcC
Q 010663 488 IIGRGGFGPFMEQDLK 503 (505)
Q Consensus 488 ~iG~G~fG~VYkg~L~ 503 (505)
+||+|.||.|.||...
T Consensus 117 ~LG~GsFgvV~rg~Wt 132 (1039)
T KOG0199|consen 117 LLGEGSFGVVKRGTWT 132 (1039)
T ss_pred HhcCcceeeEeecccc
Confidence 5999999999999874
Done!