BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010666
(504 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68F38|VAC14_XENLA Protein VAC14 homolog OS=Xenopus laevis GN=vac14 PE=2 SV=1
Length = 782
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 276/564 (48%), Gaps = 137/564 (24%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSP-SVDYGRMAEILVQRAASPDEFTRLTAITWIN 59
+L D+S EIR+ + +L EFL+EIK P SV + MA ILV S D+ +LTA+TW+
Sbjct: 224 ILGDNSKEIRKMCEVSLGEFLKEIKKLPDSVKFAEMANILVIHCQSTDDLIQLTAMTWMR 283
Query: 60 EFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEEL--------------- 102
EF++L G ++PY + IL A+LPC+S D+++ I+ VA N+ L
Sbjct: 284 EFLQLAGRVMLPYSSGILTAVLPCLSYDDRKKNIKEVANVCNQSLMKLITPEDDETDEVR 343
Query: 103 -------------------------RAIKADPADGFD------------------VGPIL 119
R + + P D + I+
Sbjct: 344 QSPATQPDEDFSSNHENSSQHTTYNRTLPSAPDSSLDNANIFAPSSMNTCPVSLNLDGIV 403
Query: 120 SIATRQL--SSEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLL 177
+ R L S+ TRI L W+ L + ++ + +F LLK LSD SDEV+L
Sbjct: 404 HVLDRHLHESTTGMMTRICVLKWLYHLYIKTPRKMFRHTDSLFPILLKTLSDESDEVILK 463
Query: 178 VLEV---------------------------------------HACIAKDLQ-------- 190
LEV H + + L+
Sbjct: 464 DLEVLAEIASSPAGQTDIVTDCNDLPTGMSELHVPVPTKVTQAHGSVIRGLECSPSTPTM 523
Query: 191 --HFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFAC 248
+F + +V L+ F + LLE RGA IIR+LC+LL+AE ++ ++ IL E DL FA
Sbjct: 524 NSYFHRFMVNLLKRFSNERKLLEIRGAFIIRQLCLLLNAENIFHSMADILLREEDLKFAS 583
Query: 249 TMVQALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQTY 308
TMVQ LN ILLTSSEL +LR LK L P +LF LY SWCH+P+A +SLC L Q Y
Sbjct: 584 TMVQNLNSILLTSSELFQLRSQLK-DLQTPESCNLFCCLYRSWCHNPVATVSLCFLTQNY 642
Query: 309 HHASAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLLM 368
HA +IQ + ++ V FL ++DKL++L+E PIF YLRLQLL+ +L++ALYGLLM
Sbjct: 643 QHAYNLIQKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVENNPYLIRALYGLLM 702
Query: 369 LLPQQSAAFKILRTRLKTVPSFSFNGEQIKRTSSGNPYSQILHSMPSGSQFSEDGDVNSD 428
LLP QS+AF++L RL+ VP+ Q+ R H S+ ++
Sbjct: 703 LLP-QSSAFQLLSHRLQCVPN-----PQLMRPG---------HKQEESSRAPKEDP---- 743
Query: 429 VGSSHGGINFASRLQQFEQMQHQH 452
I++ LQ FE++Q++H
Sbjct: 744 -----ARIDYVELLQHFEKVQNKH 762
>sp|Q66L58|VAC14_DANRE Protein VAC14 homolog OS=Danio rerio GN=vac14 PE=2 SV=1
Length = 771
Score = 268 bits (686), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 279/555 (50%), Gaps = 129/555 (23%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSPS-VDYGRMAEILV------QRAASPDEFTRLT 53
+L DSS EIR+ + L EFL+EIK +PS V + MA ILV + S ++ +LT
Sbjct: 224 ILGDSSKEIRRMCELVLGEFLKEIKKNPSSVKFAEMANILVIHCQVSDESKSTNDLIQLT 283
Query: 54 AITWINEFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEELRAI------ 105
++TW+ EF++L G ++PY + IL A+LPC+S D+++ + A N L +
Sbjct: 284 SMTWMREFIQLAGRVVLPYSSGILTAVLPCLSYDDRKKSTKEAASACNHSLMKLVTPEDD 343
Query: 106 ---------KADPAD---------------------GF------------------DVGP 117
+ P+D GF D+
Sbjct: 344 EDDEESQTKSSPPSDEAPSKKEGDLNDSLNESQESVGFSNISFFTPASSDRSAVTLDLDG 403
Query: 118 ILSIATRQL--SSEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVV 175
I+ + R L SS TRI L W+ L + ++ + +F LLK LSD SDEV+
Sbjct: 404 IVQVLDRHLHDSSTGMMTRIAVLKWLYHLYIKTPRKMFKHTDSLFPMLLKTLSDESDEVI 463
Query: 176 LLVLEVHACIAK-----------------------------DLQ--------HFRQLVVF 198
L LEV A IA DL +F + ++
Sbjct: 464 LKDLEVLAEIASSPAGQTDTSGSCDISDSKTELHIPGSKMTDLSPSTPSMNSYFYKFMIN 523
Query: 199 LVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFACTMVQALNLIL 258
L+ F ++ LLE RGA IIR+LC+LL AE ++ ++ IL E DL FA TMVQ LN IL
Sbjct: 524 LLKRFSLERKLLEMRGAFIIRQLCLLLHAENIFHSMADILLKEEDLKFASTMVQTLNTIL 583
Query: 259 LTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQTYHHASAVIQSL 318
LTS+EL +LR+ LK L LF LY SWCH+P+A +SLC L Q Y HA +IQ
Sbjct: 584 LTSAELFQLRNQLK-DLRTQESCALFCCLYRSWCHNPVATVSLCFLTQNYRHAYDLIQKF 642
Query: 319 VEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLLMLLPQQSAAFK 378
+ ++ V FL+++DKL++L+E+PIF YLRLQLL+ +L+KALYGLLMLLP QS AF+
Sbjct: 643 GDLEVTVDFLMEVDKLVQLIESPIFTYLRLQLLDVEHNPYLIKALYGLLMLLP-QSQAFQ 701
Query: 379 ILRTRLKTVPSFSFNGEQIKRTSSGNPYSQILHSMPSGSQFSEDGDVN-SDVGSSHGGIN 437
+L RL VP NP +++ ++ ED V D + I+
Sbjct: 702 LLSHRLSCVP---------------NP--ELMRTL-------EDQKVAVKDKHLAQPHID 737
Query: 438 FASRLQQFEQMQHQH 452
++ LQ F+++Q +H
Sbjct: 738 YSELLQHFDRVQSKH 752
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 47 DEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIK 106
D R A + VK+ ++P++ + + +D + ++ + + L+ I
Sbjct: 106 DSRLRYYACEALYNIVKVARGAVLPHFNVLFDGLSKLAADPDPNVKSGSELLDRLLKDIV 165
Query: 107 ADPADGFDVGPILSIATRQLSSEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKA 166
+ ++ FD+ + + ++ S + R + WI L + +L +L +I D L +
Sbjct: 166 TE-SNKFDLVAFVPLLRERIYSNNQYARQFIISWIHVLESVPDINLLDYLPEILDGLFQI 224
Query: 167 LSDPSDEV 174
L D S E+
Sbjct: 225 LGDSSKEI 232
>sp|Q80W92|VAC14_RAT Protein VAC14 homolog OS=Rattus norvegicus GN=Vac14 PE=1 SV=1
Length = 783
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 192/565 (33%), Positives = 275/565 (48%), Gaps = 138/565 (24%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSPS-VDYGRMAEILVQRAASPDEFTRLTAITWIN 59
+L D+ EIR+ + L EFL+EIK +PS V + MA ILV + D+ +LTA+ W+
Sbjct: 224 ILGDNGKEIRKMCEVVLGEFLKEIKKNPSSVKFAEMANILVIHCQTTDDLIQLTAMCWMR 283
Query: 60 EFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEEL--------------- 102
EF++L G ++PY + IL A+LPC++ D+++ I+ VA N+ L
Sbjct: 284 EFIQLAGRVMLPYSSGILTAVLPCLAYDDRKKSIKEVANVCNQSLMKLVTPEDDEPDEPK 343
Query: 103 ----RAIKADPAD----------GFDVGPI-------LSIATRQLSSEWEAT-------- 133
+ + +P D G GP +S+ T + T
Sbjct: 344 SVAQKQTEPNPEDSLPKQEGTASGGASGPCDSSFGSGISVFTSASTDRAPVTLHLDGIVQ 403
Query: 134 ---------------RIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLV 178
RI L W+ L + ++ + +F LL+ LSD SDEVVL
Sbjct: 404 VLNCHLSDTTIGMMTRIAVLKWLYHLYIKTPRKMFRHTDSLFPILLQTLSDESDEVVLKD 463
Query: 179 LEVHACIAK---------------DLQ--------------------------------- 190
LEV A IA DLQ
Sbjct: 464 LEVLAEIASSPAGQTDDPGAPDGPDLQVNHSELQVPTSGRANLLNPPNTKGLECSPSTPT 523
Query: 191 ---HFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFA 247
+F + ++ L+ F + LLE RG IIR+LC+LL+AE ++ ++ IL E DL FA
Sbjct: 524 MNSYFYKFMINLLQTFSSERKLLEARGPFIIRQLCLLLNAENIFHSMADILLREEDLKFA 583
Query: 248 CTMVQALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQT 307
TMV LN ILLTS+EL +LR+ L K L ++LF LY SWCH+P+ +SLC L Q
Sbjct: 584 STMVHTLNTILLTSTELFQLRNQL-KDLKTLESQNLFCCLYRSWCHNPVTTVSLCFLTQN 642
Query: 308 YHHASAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLL 367
Y HA +IQ + ++ V FL ++DKL++L+E PIF YLRLQLL+ +L+KALYGLL
Sbjct: 643 YRHAYDLIQKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVKNNPYLMKALYGLL 702
Query: 368 MLLPQQSAAFKILRTRLKTVPSFSFNGEQIKRTSSGNPYSQILHSMPSGSQFSEDGDVNS 427
MLLP QS+AF++L RL+ VP N E ++ L + P S+ GD S
Sbjct: 703 MLLP-QSSAFQLLSHRLQCVP----NPELLQT-------EDCLKAAPK----SQKGDSPS 746
Query: 428 DVGSSHGGINFASRLQQFEQMQHQH 452
I++ LQ FE++Q QH
Sbjct: 747 --------IDYTELLQHFEKVQKQH 763
>sp|Q5ZIW5|VAC14_CHICK Protein VAC14 homolog OS=Gallus gallus GN=VAC14 PE=2 SV=1
Length = 780
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 258/499 (51%), Gaps = 112/499 (22%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSPS-VDYGRMAEILVQRAASPDEFTRLTAITWIN 59
+L D+S EIR+ + AL EFL+EIK +PS V + MA ILV + D+ +LTA+ W+
Sbjct: 224 ILGDNSKEIRKMCEVALGEFLKEIKKNPSSVKFAEMANILVIHCQAADDLIQLTAMCWMR 283
Query: 60 EFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEELR-------------- 103
EF++L G ++PY + IL A+LPC+S D+++ I+ VA N+ L
Sbjct: 284 EFIQLAGRVMLPYSSGILTAVLPCLSYDDRKKNIKEVANVCNQSLMKLVIPEDDEMDEAK 343
Query: 104 ---AIKADP-------------ADGFDVGPILSIATRQLSSEWEATRIEA---LHWISTL 144
+ A+P DV S++ + + + RI+ L I +
Sbjct: 344 QSITLSAEPNPEEPVSKPEAASTGSLDVSGDSSVSNASVCTVTSSERIQVTLNLDGIVQV 403
Query: 145 LNRH----------RTEVLHFL---------------NDIFDTLLKALSDPSDEVVLLVL 179
L+ H R VL +L + +F LL+ LSD SDEV+L L
Sbjct: 404 LDCHLHDTSIGMMTRIAVLKWLYHLYIKTPRKMFRHTDSLFPILLRTLSDESDEVILKDL 463
Query: 180 EVHACIA---------------------------------------KDLQ---------- 190
EV A IA K L+
Sbjct: 464 EVLAEIASSPAGQTEGYGPSEAAEPRPGQVELHVPIRNSQLSSSGPKGLECSPSTPTMNS 523
Query: 191 HFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFACTM 250
+F + ++ L+ F + LLE RGA IIR+LC+LL+ E ++ ++ IL E DL FA TM
Sbjct: 524 YFYKFMINLLKRFSSERKLLETRGAFIIRQLCLLLNTENIFHSMADILLREEDLKFASTM 583
Query: 251 VQALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQTYHH 310
V LN ILLTSSEL +LR+ L K L P ++LF LY SWCH+P+ +SLC L Q Y H
Sbjct: 584 VHTLNTILLTSSELFQLRNQL-KDLRTPESRNLFCCLYRSWCHNPVTTVSLCFLTQNYKH 642
Query: 311 ASAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLLMLL 370
A +IQ + ++ V FL ++DKL++L+E PIF YLRLQLL+ +L+KALYGLLMLL
Sbjct: 643 AYDLIQKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVKNNPYLIKALYGLLMLL 702
Query: 371 PQQSAAFKILRTRLKTVPS 389
P QS+AF++L RL+ VP+
Sbjct: 703 P-QSSAFQLLSHRLQCVPN 720
>sp|Q80WQ2|VAC14_MOUSE Protein VAC14 homolog OS=Mus musculus GN=Vac14 PE=1 SV=1
Length = 782
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 276/566 (48%), Gaps = 141/566 (24%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSPS-VDYGRMAEILVQRAASPDEFTRLTAITWIN 59
+L D+ EIR+ + L EFL+EIK +PS V + MA ILV + D+ +LTA+ W+
Sbjct: 224 ILGDNGKEIRKMCEVVLGEFLKEIKKNPSSVKFAEMANILVIHCQTTDDLIQLTAMCWMR 283
Query: 60 EFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEEL--------------- 102
EF++L G ++PY + IL A+LPC++ D+++ I+ VA N+ L
Sbjct: 284 EFIQLAGRVMLPYSSGILTAVLPCLAYDDRKKSIKEVANVCNQSLMKLVTPEDDEPDEPK 343
Query: 103 ----RAIKADPADGF----------------DVGPILSIATRQLSSEWEATRIEALHWIS 142
+ + +P D G +++ T + T L I
Sbjct: 344 SVAQKQTEPNPEDSLPKQEGTASGGPGSCDSSFGSGINVFTSANTDRAPVTL--HLDGIV 401
Query: 143 TLLNRH----------RTEVLHFL---------------NDIFDTLLKALSDPSDEVVLL 177
+LN H R VL +L + +F LL+ LSD SDEVVL
Sbjct: 402 QVLNCHLSDTTIGMMTRIAVLKWLYHLYIKTPRKMFRHTDSLFPILLQTLSDESDEVVLK 461
Query: 178 VLEVHACIAK---------------DLQ-------------------------------- 190
LEV A IA DL+
Sbjct: 462 DLEVLAEIASSPAGQTDDPGAPDGPDLRVNHSELQVPTSGRANLLNPPSTKGLEGSPSTP 521
Query: 191 ----HFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDF 246
+F + ++ L+ F + LLE RG IIR+LC+LL+AE ++ ++ IL E DL F
Sbjct: 522 TMNSYFYKFMINLLQTFSSERKLLEARGPFIIRQLCLLLNAENIFHSMADILLREEDLKF 581
Query: 247 ACTMVQALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQ 306
A TMV LN ILLTS+EL +LR+ L K L P ++LF LY SWCH+P+ +SLC L Q
Sbjct: 582 ASTMVHTLNTILLTSTELFQLRNQL-KDLQTPESQNLFCCLYRSWCHNPVTTVSLCFLTQ 640
Query: 307 TYHHASAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGL 366
Y HA +IQ + ++ V FL ++DKL++L+E PIF YLRLQLL+ +L+KALYGL
Sbjct: 641 NYRHAYDLIQKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVKNNPYLIKALYGL 700
Query: 367 LMLLPQQSAAFKILRTRLKTVPSFSFNGEQIKRTSSGNPYSQILHSMPSGSQFSEDGDVN 426
LMLLP QS+AF++L RL+ VP N E ++ L + P S+ GD
Sbjct: 701 LMLLP-QSSAFQLLSHRLQCVP----NPELLQT-------EDCLKAAPK----SQKGDSP 744
Query: 427 SDVGSSHGGINFASRLQQFEQMQHQH 452
S I++ LQ FE++Q QH
Sbjct: 745 S--------IDYTELLQHFEKVQKQH 762
>sp|Q08AM6|VAC14_HUMAN Protein VAC14 homolog OS=Homo sapiens GN=VAC14 PE=1 SV=1
Length = 782
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 278/564 (49%), Gaps = 137/564 (24%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSPS-VDYGRMAEILVQRAASPDEFTRLTAITWIN 59
+L D+ EIR+ + L EFL+EIK +PS V + MA ILV + D+ +LTA+ W+
Sbjct: 224 ILGDNGKEIRKMCEVVLGEFLKEIKKNPSSVKFAEMANILVIHCQTTDDLIQLTAMCWMR 283
Query: 60 EFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEEL--------------- 102
EF++L G ++PY + IL A+LPC++ D+++ I+ VA N+ L
Sbjct: 284 EFIQLAGRVMLPYSSGILTAVLPCLAYDDRKKSIKEVANVCNQSLMKLVTPEDDELDELR 343
Query: 103 ---RAIKADPADGF-------DVGPILS--------IATRQLSSEWEATRIEALHWISTL 144
R + P D GP S I+ +S A L I +
Sbjct: 344 PGQRQAEPTPDDALPKQEGTASGGPDGSCDSSFSSGISVFTAASTERAPVTLHLDGIVQV 403
Query: 145 LNRH----------RTEVLHFL---------------NDIFDTLLKALSDPSDEVVLLVL 179
LN H R VL +L + +F LL+ LSD SDEV+L L
Sbjct: 404 LNCHLSDTAIGMMTRIAVLKWLYHLYIKTPRKMFRHTDSLFPILLQTLSDESDEVILKDL 463
Query: 180 EVHACIAK---------------DLQ---------------------------------- 190
EV A IA DLQ
Sbjct: 464 EVLAEIASSPAGQTDDPGPLDGPDLQASHSELQVPTPGRAGLLNTSGTKGLECSPSTPTM 523
Query: 191 --HFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFAC 248
+F + ++ L+ F + LLE RG IIR+LC+LL+AE ++ ++ IL E DL FA
Sbjct: 524 NSYFYKFMINLLKRFSSERKLLEVRGPFIIRQLCLLLNAENIFHSMADILLREEDLKFAS 583
Query: 249 TMVQALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQTY 308
TMV ALN ILLTS+EL +LR+ L K L ++LF LY SWCH+P+ +SLC L Q Y
Sbjct: 584 TMVHALNTILLTSTELFQLRNQL-KDLKTLESQNLFCCLYRSWCHNPVTTVSLCFLTQNY 642
Query: 309 HHASAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLLM 368
HA +IQ + ++ V FL ++DKL++L+E PIF YLRLQLL+ +L+KALYGLLM
Sbjct: 643 RHAYDLIQKFGDLEVTVDFLAEVDKLVQLIECPIFTYLRLQLLDVKNNPYLIKALYGLLM 702
Query: 369 LLPQQSAAFKILRTRLKTVPSFSFNGEQIKRTSSGNPYSQILHSMPSGSQFSEDGDVNSD 428
LLP QS+AF++L RL+ VP N E ++ S L + P S+ D S
Sbjct: 703 LLP-QSSAFQLLSHRLQCVP----NPELLQTEDS-------LKAAPK----SQKADSPS- 745
Query: 429 VGSSHGGINFASRLQQFEQMQHQH 452
I++A LQ FE++Q++H
Sbjct: 746 -------IDYAELLQHFEKVQNKH 762
>sp|A2VE70|VAC14_BOVIN Protein VAC14 homolog OS=Bos taurus GN=VAC14 PE=2 SV=1
Length = 783
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 271/565 (47%), Gaps = 138/565 (24%)
Query: 1 MLSDSSHEIRQQADSALWEFLQEIKNSPS-VDYGRMAEILVQRAASPDEFTRLTAITWIN 59
+L D+ EIR+ + L EFL+E K SPS V + MA ILV + D+ +LTA+ W+
Sbjct: 224 ILGDNGKEIRKMCEVVLGEFLKETKKSPSSVKFAEMANILVIHCQTTDDLIQLTAMCWLR 283
Query: 60 EFVKLGGDQLVPYYADILGAILPCIS--DKEEKIRVVARETNEELR-------------- 103
EF++L G ++PY + IL A+LPC++ D++ I+ VA N+ L
Sbjct: 284 EFIQLAGRVMLPYSSGILTAVLPCLAYDDRKRNIKEVASVCNQSLMKLVTPEDDEPDEPR 343
Query: 104 --------------------AIKADPADGFDVGPILSIATRQLSSEWEATRIEALHWIST 143
A P D I+ +S A L I
Sbjct: 344 PVVQKQAGPSPEDCAAKQEGAASGGPDGSCDSSFSSGISVFTPASAERAPVTLHLDGIVQ 403
Query: 144 LLNRH----------RTEVLHFL---------------NDIFDTLLKALSDPSDEVVLLV 178
+LN H R VL +L + +F LL+ LSD SDEV+L
Sbjct: 404 VLNCHLSDTAIGMMTRIAVLKWLYHLYIKTPRKMSRHTDSLFPVLLQTLSDESDEVILKD 463
Query: 179 LEVHACIAK---------------DLQ--------------------------------- 190
LEV A IA DL+
Sbjct: 464 LEVLAEIASSPAGQTDDPGPLDGPDLRVSHSELQAPIPGRAGLLNTPGTKGLECSPSTPT 523
Query: 191 ---HFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFA 247
+F + ++ L+ F + LLE RGA IIR+LC+LL AE ++ ++ IL E DL FA
Sbjct: 524 MNSYFYKFMINLLKRFSSERKLLEVRGAFIIRQLCLLLHAESIFHSMADILLREEDLTFA 583
Query: 248 CTMVQALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQT 307
TMV LN ILLTS+EL +LR+ L K L P ++LF LY SWCH P+ +SLC L Q
Sbjct: 584 STMVHTLNTILLTSTELFQLRNQL-KDLKTPESRNLFCCLYRSWCHKPVTTVSLCFLTQN 642
Query: 308 YHHASAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLL 367
Y HA +IQ + ++ V FL ++DKL++L+E PIF YLRLQLL+ +L+KALYGLL
Sbjct: 643 YRHAYDLIQKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVKSNPYLIKALYGLL 702
Query: 368 MLLPQQSAAFKILRTRLKTVPSFSFNGEQIKRTSSGNPYSQILHSMPSGSQFSEDGDVNS 427
MLLP QS+AF++L RL+ VP+ ++ +T G L + P S+ D S
Sbjct: 703 MLLP-QSSAFQLLSHRLQCVPN-----PELLQTEDG------LKAAPK----SQKADSPS 746
Query: 428 DVGSSHGGINFASRLQQFEQMQHQH 452
I++A LQ FE++Q +H
Sbjct: 747 --------IDYAELLQHFERVQKKH 763
>sp|P87145|VAC14_SCHPO Protein VAC14 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC25H2.03 PE=3 SV=1
Length = 811
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 229/399 (57%), Gaps = 27/399 (6%)
Query: 30 VDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEE 89
+DY R+ EI++ S + A+ W+ EF+ + ++ +L +LP +S+ +E
Sbjct: 335 IDYKRILEIIIDHLGSSVPLIQEKALKWLFEFIYIAPKDVLLQIPKVLENLLPLMSN-DE 393
Query: 90 KIRVVARETNEELRAI---------------KADPADGFDVGPILSIATRQLSSEWEATR 134
+R A++ ++ L + D + D ++ + + LS++ E TR
Sbjct: 394 NMRQSAKDLSQNLVILVSKIMDIEFSGSETNNKDNSLSVDFRSLIEVLQKLLSNDNEETR 453
Query: 135 IEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAKDLQHFRQ 194
+ AL W+ L R ++++ + IF TLL LSDPSD VV LE+ A IA +
Sbjct: 454 LCALEWVLLLQRRTGGKLINMHDPIFQTLLLQLSDPSDLVVSRTLELLAHIAISHKSV-N 512
Query: 195 LVVFL---VHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFACTMV 251
LV FL + F D L RG LIIR+LC ++ ERVY + ILE E +L+ A MV
Sbjct: 513 LVPFLKSLLQMFAEDRKFLNSRGNLIIRQLCNYIEGERVYTSFAGILETEENLELASIMV 572
Query: 252 QALNLILLTSSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQTYHHA 311
+ LN L T+ EL +LR LK+S P +++F +LY +WCH+ +A+ SLCLL+Q Y HA
Sbjct: 573 EVLNNNLFTAPELYDLRKKLKQS--APKLQNIFTTLYTAWCHNSIAVFSLCLLSQNYEHA 630
Query: 312 SAVIQSLVEEDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLLMLLP 371
+ ++ E + N+ L+QLDKL++L+E+P+F Y+RLQLLEP +Y +L KALYG+LMLLP
Sbjct: 631 ANLLSVFAEIEFNIDMLIQLDKLVQLIESPVFTYMRLQLLEPEKYPYLHKALYGILMLLP 690
Query: 372 QQSAAFKILRTRLKTVPSFSFN----GEQIKRTSSGNPY 406
QS+AF+ LR RL+ + N E++ R+ +PY
Sbjct: 691 -QSSAFRTLRDRLQCSSTPRTNTILANERLPRSRRDDPY 728
>sp|Q06708|VAC14_YEAST Vacuole morphology and inheritance protein 14 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VAC14 PE=1
SV=1
Length = 880
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 203/367 (55%), Gaps = 14/367 (3%)
Query: 29 SVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKE 88
++++ + +LV AS + +L A+ WI + + + +P+ + IL +L +SD +
Sbjct: 387 NLNFPEVITVLVNNLASSEAEIQLIALHWIQVILSISPNVFIPFLSKILSVLLKLLSDSD 446
Query: 89 EKIRVVARETNEELRAIKAD----PADG-FDVGPILSIATRQLSSEWEATRIEALHWIST 143
I +A+ N +L ++ + DG GPI++ T Q +I L W+
Sbjct: 447 PHITEIAQLVNGQLLSLCSSYVGKETDGKIAYGPIVNSLTLQFFDSRIDAKIACLDWLIL 506
Query: 144 LLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVL---LVLEVHACIAKDLQHFRQLVVFLV 200
+ ++ ++L + +F TLLK+LS+ D V++ L L C + + RQ + L+
Sbjct: 507 IYHKAPNQILKHNDSMFLTLLKSLSN-RDSVLIEKALSLLQSLCSDSNDNYLRQFLQDLL 565
Query: 201 HNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEADLDFACTMVQALNLILLT 260
F+ D L++ R I+R++ L ERVY+ +S+IL+ D F M+Q L+ L+T
Sbjct: 566 TLFKRDTKLVKTRANFIMRQISSRLSPERVYKVISSILDNYNDTTFVKMMIQILSTNLIT 625
Query: 261 SSELSELRDLLKKSLVNPAGKDLFVSLYASWCHSPMAIISLCLLAQTYHHASAVIQSLVE 320
S E+S LR+ L+ F SL+ SWC +P+++ISLC +A+ Y A V+Q+
Sbjct: 626 SPEMSSLRNKLRTC----EDGMFFNSLFKSWCPNPVSVISLCFVAENYELAYTVLQTYAN 681
Query: 321 EDLNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLLKALYGLLMLLPQQSAAFKIL 380
+L + LVQLD LI+L E+P+F +RLQLLE ++ +L K L+G+LM++P QS AF+ L
Sbjct: 682 YELKLNDLVQLDILIQLFESPVFTRMRLQLLEQQKHPFLHKCLFGILMIIP-QSKAFETL 740
Query: 381 RTRLKTV 387
RL ++
Sbjct: 741 NRRLNSL 747
>sp|P08032|SPTA1_MOUSE Spectrin alpha chain, erythrocytic 1 OS=Mus musculus GN=Spta1 PE=2
SV=3
Length = 2415
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 68/247 (27%)
Query: 140 WISTLLNRHRTEVLHFLNDIFDTL-------LKALSDPSD-EVVLLVLEVHACIAKDLQH 191
W S L + H + ++ D+ ++ LK S+ +D L +L H + LQ
Sbjct: 1916 WKSQLDDVHAFQQFNWKADVVESWIGEKEASLKTKSNGADLTAFLTLLAKHDTLDASLQS 1975
Query: 192 FRQ--------LVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGEAD 243
F+Q L LV +E++ A ++R LL+A RV+R+
Sbjct: 1976 FQQERLSEIAELKDQLVAGEHSQAKAIEEQHAALLRHWEQLLEASRVHRQ---------- 2025
Query: 244 LDFACTMVQALNLILLTSSELSELRDLLKKSLVNPAGKDLFV------SLYASWCHS--- 294
LL+K L ++LF+ S + +WC +
Sbjct: 2026 -------------------------KLLEKQLPLQKAEELFMEFAHKASAFNNWCENAEE 2060
Query: 295 ----PMAIISLCLLAQTYHHASAVIQSLV--EEDLNVKFLVQLDKLIRLLETPIFAYLRL 348
P+ +SL + Q A + SL +ED N +L++LDK I+ L P Y L
Sbjct: 2061 DLSEPVHCVSLNEIRQLQKEHEAFLASLAGAQEDFN--YLLELDKQIKALNVPSSPYTWL 2118
Query: 349 QLLEPGR 355
+ GR
Sbjct: 2119 TVDVLGR 2125
>sp|Q92973|TNPO1_HUMAN Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2
Length = 898
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 69 LVPYYADILGAILPCISDKEEKIRVVARET-NEELRAIKADPADGFDVGPILSIATRQLS 127
++PY +++ ++ C+SDK+ +R + T + + + P D + + P+++ +++
Sbjct: 440 MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTY-LKPLMTELLKRIL 498
Query: 128 SEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAK 187
+ + A +TL TE++ +L I DTL+ A S + +L++ + +A
Sbjct: 499 DSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLAD 558
Query: 188 DLQH 191
+ H
Sbjct: 559 SVGH 562
>sp|Q8BFY9|TNPO1_MOUSE Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2
Length = 898
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 69 LVPYYADILGAILPCISDKEEKIRVVARET-NEELRAIKADPADGFDVGPILSIATRQLS 127
++PY +++ ++ C+SDK+ +R + T + + + P D + + P+++ +++
Sbjct: 440 MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTY-LKPLMTELLKRIL 498
Query: 128 SEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAK 187
+ + A +TL TE++ +L I DTL+ A S + +L++ + +A
Sbjct: 499 DSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLAD 558
Query: 188 DLQH 191
+ H
Sbjct: 559 SVGH 562
>sp|Q3SYU7|TNPO1_BOVIN Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2
Length = 898
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 69 LVPYYADILGAILPCISDKEEKIRVVARET-NEELRAIKADPADGFDVGPILSIATRQLS 127
++PY +++ ++ C+SDK+ +R + T + + + P D + + P+++ +++
Sbjct: 440 MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTY-LKPLMTELLKRIL 498
Query: 128 SEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAK 187
+ + A +TL TE++ +L I DTL+ A S + +L++ + +A
Sbjct: 499 DSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLAD 558
Query: 188 DLQH 191
+ H
Sbjct: 559 SVGH 562
>sp|Q54WR2|GCN1L_DICDI Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1
PE=3 SV=1
Length = 2667
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 118 ILSIATRQLSSEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLL 177
IL I R L SE E TR +S +++ +T++L +L+ + + KAL DP
Sbjct: 1966 ILPILERGLRSELEETRQGVCIGLSEVISSAKTQLLPYLSSVVTCITKALCDP------- 2018
Query: 178 VLEVHACIAKDLQHF 192
+++V AK H
Sbjct: 2019 LIDVREAAAKAFDHL 2033
>sp|O14787|TNPO2_HUMAN Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3
Length = 897
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 69 LVPYYADILGAILPCISDKEEKIRVVARET-NEELRAIKADPADGFDVGPILSIATRQLS 127
+VPY +++ ++ C+SDK+ +R +A T + + + P D + P+++ +++
Sbjct: 429 MVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPD-MHLKPLMTELLKRIL 487
Query: 128 SEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAK 187
+ + A +TL TE++ +L+ I DTL+ A + +L++ + +A
Sbjct: 488 DGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYDAIGTLAD 547
Query: 188 DLQH 191
+ H
Sbjct: 548 SVGH 551
>sp|Q99LG2|TNPO2_MOUSE Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1
Length = 887
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 69 LVPYYADILGAILPCISDKEEKIRVVARET-NEELRAIKADPADGFDVGPILSIATRQLS 127
+VPY +++ ++ C+SDK+ +R +A T + + + P D + P+++ +++
Sbjct: 429 MVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPD-MHLKPLMTELLKRIL 487
Query: 128 SEWEATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAK 187
+ + A +TL TE++ +L+ I DTL+ A + +L++ + +A
Sbjct: 488 DGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYDAIGTLAD 547
Query: 188 DLQH 191
+ H
Sbjct: 548 SVGH 551
>sp|Q0V9L1|MMS19_XENTR MMS19 nucleotide excision repair protein homolog OS=Xenopus
tropicalis GN=mms19 PE=2 SV=2
Length = 1022
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%)
Query: 15 SALWEFLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVPYYA 74
+ L LQE + V + LV SP R+TA+ I KL L+PY
Sbjct: 927 TCLEPLLQEAPETLKVHIDGLISKLVSLTLSPAMAVRITALKCILALTKLPLHMLLPYKQ 986
Query: 75 DILGAILPCISDKEEKIRVVARET 98
++ A+ + DK+ +R A ET
Sbjct: 987 QVIRALAKPLDDKKRLVRKEAVET 1010
>sp|Q6FRZ9|ATM_CANGA Serine/threonine-protein kinase TEL1 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TEL1 PE=3 SV=1
Length = 2763
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 18/93 (19%)
Query: 131 EATRIEALHWISTLLNRHRTEVLHFLNDIFDTLLKALS-DPSDEVVLLV----------- 178
E ++ L +I+ LL+ ++ L IF+ LL +L+ +P DE+ LV
Sbjct: 474 ETLYLKVLKYITPLLSTSEVNIMACL--IFNKLLHSLTREPIDELSSLVNSIIASPDSVL 531
Query: 179 -LEVHACIAKDLQHFRQLVVFLVHNFRVDNSLL 210
+E+ + + QH + VF ++N +VDNSLL
Sbjct: 532 PIEISSVTCEAWQH---IFVFAINNLKVDNSLL 561
>sp|Q05766|CYAA_PASMU Adenylate cyclase OS=Pasteurella multocida (strain Pm70) GN=cya
PE=3 SV=2
Length = 838
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 71 PYYADILGAILPCISDKEEKIRVVARETNEELRAIKADPADGFDVGPILSI---ATRQLS 127
PY + I +L S + ++AR+ EEL K +P+ FD P L++ ATR L+
Sbjct: 262 PYKSVIKILLLETYSSEYPNTYLIARQFKEELLTGKLNPSHHFD--PYLAMLQRATRYLT 319
Query: 128 SEWEATRI------------EALHWIS-TLLNRHRTEVLHFL---NDIFDTLLKALSDPS 171
E R+ E + W N R + L L D D L++ L+ +
Sbjct: 320 KHNELKRLGFVRRSVYLKATEGMCWQDPNATNNWRLQHLQKLIQEWDWSDALIEELNQRA 379
Query: 172 DEVVLLVLEVHACIAKDLQ-HFRQLVVFLVHNFRVDNSLLEKRGALIIRRL 221
+ + V + H + K L +R LV F +V++S++ + +++ R+L
Sbjct: 380 NWKIKQVKKAHNSLIKFLMLSYRNLVAF-ARKHKVNSSIMPQDISVLTRKL 429
>sp|Q6DCF2|MMS19_XENLA MMS19 nucleotide excision repair protein homolog OS=Xenopus laevis
GN=mms19 PE=2 SV=1
Length = 1022
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 16 ALWEFLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVPYYAD 75
L LQE + V + L+ + SP R+TA+ I KL L+PY
Sbjct: 928 CLEPLLQEAPETLKVHIDGLISKLLGLSCSPAMAVRITALKCILALTKLPLHMLLPYKQQ 987
Query: 76 ILGAILPCISDKEEKIRVVARET 98
++ A+ + DK+ +R A ET
Sbjct: 988 VIRALAKPLDDKKRLVRKEAVET 1010
>sp|Q03W70|ASSY_LEUMM Argininosuccinate synthase OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=argG PE=3
SV=1
Length = 408
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 426 NSDVGSSHGGINFASRLQQFEQMQHQHRIHGKAQAQLRSSSTSSSKEVQRPQEQHRPPPS 485
N V +HG + +FE H K +A +R S +E+Q QE P P
Sbjct: 108 NDAVAIAHGSTGHGNDQVRFEAAIHALDPDMKIEAPIRDFQWSREEEIQYAQEHDVPVPI 167
Query: 486 DISRPSS 492
D+ P S
Sbjct: 168 DLDSPYS 174
>sp|A1KR57|SYM_NEIMF Methionine--tRNA ligase OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=metG PE=3
SV=1
Length = 685
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 14 DSALWEFLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVPY 72
D L E E+ N+ ++ +A +L Q A + F L AITW N V LG + Y
Sbjct: 477 DERLHEVCSELINAFTMLTAYLAPVLPQTATNAARFLNLDAITWTNTRVTLGKHAINKY 535
>sp|Q9JWP0|SYM_NEIMA Methionine--tRNA ligase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=metG PE=3 SV=1
Length = 685
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 14 DSALWEFLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVPY 72
D+ L E E+ N+ ++ +A +L Q AA+ +F L AITW N LG + Y
Sbjct: 477 DARLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNLEAITWANTRETLGKHAINKY 535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,055,667
Number of Sequences: 539616
Number of extensions: 6822482
Number of successful extensions: 22893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 22663
Number of HSP's gapped (non-prelim): 205
length of query: 504
length of database: 191,569,459
effective HSP length: 122
effective length of query: 382
effective length of database: 125,736,307
effective search space: 48031269274
effective search space used: 48031269274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)