Query 010669
Match_columns 504
No_of_seqs 892 out of 4154
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 11:45:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 1.8E-46 6.1E-51 366.5 39.7 272 219-502 51-326 (340)
2 1vyh_C Platelet-activating fac 100.0 4E-46 1.4E-50 373.5 37.4 268 219-502 104-394 (410)
3 2ynn_A Coatomer subunit beta'; 100.0 3.2E-42 1.1E-46 330.9 39.6 268 218-501 8-283 (304)
4 3ow8_A WD repeat-containing pr 100.0 9.8E-42 3.3E-46 330.1 37.9 268 219-502 28-304 (321)
5 2pbi_B Guanine nucleotide-bind 100.0 4.8E-41 1.6E-45 329.9 41.2 274 218-502 59-340 (354)
6 3iz6_a 40S ribosomal protein R 100.0 7.7E-41 2.6E-45 331.7 31.4 279 218-502 61-358 (380)
7 4ery_A WD repeat-containing pr 100.0 1.8E-39 6.3E-44 312.6 39.8 270 219-502 19-293 (312)
8 3frx_A Guanine nucleotide-bind 100.0 3.5E-39 1.2E-43 311.9 39.4 269 218-502 12-300 (319)
9 3ow8_A WD repeat-containing pr 100.0 2.7E-39 9.1E-44 313.0 36.6 241 219-469 76-319 (321)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.2E-39 1.8E-43 314.3 36.7 277 219-501 11-316 (345)
11 1vyh_C Platelet-activating fac 100.0 2.8E-39 9.5E-44 323.8 35.3 242 218-469 145-409 (410)
12 2xzm_R RACK1; ribosome, transl 100.0 1.5E-38 5.3E-43 310.7 38.9 271 218-502 16-323 (343)
13 4gqb_B Methylosome protein 50; 100.0 6.9E-39 2.4E-43 312.7 34.1 265 221-501 28-312 (344)
14 4gqb_B Methylosome protein 50; 100.0 7.4E-39 2.5E-43 312.5 33.7 239 222-470 81-330 (344)
15 1erj_A Transcriptional repress 100.0 3.7E-38 1.3E-42 313.9 38.3 261 221-499 62-363 (393)
16 2pm7_B Protein transport prote 100.0 2.7E-38 9.1E-43 302.6 34.6 258 218-482 4-295 (297)
17 2hes_X YDR267CP; beta-propelle 100.0 2.5E-37 8.6E-42 300.4 38.5 270 219-501 10-310 (330)
18 4g56_B MGC81050 protein; prote 100.0 4.8E-38 1.7E-42 308.8 33.6 266 221-501 40-325 (357)
19 3frx_A Guanine nucleotide-bind 100.0 2.1E-37 7.1E-42 299.5 37.5 243 219-471 61-317 (319)
20 1nr0_A Actin interacting prote 100.0 8.4E-38 2.9E-42 329.2 37.6 270 218-503 54-382 (611)
21 2ynn_A Coatomer subunit beta'; 100.0 2.2E-37 7.6E-42 297.2 36.0 243 219-469 51-300 (304)
22 1got_B GT-beta; complex (GTP-b 100.0 4E-37 1.4E-41 300.2 37.4 238 220-468 94-340 (340)
23 1nr0_A Actin interacting prote 100.0 3.3E-37 1.1E-41 324.7 39.3 276 218-502 142-550 (611)
24 4g56_B MGC81050 protein; prote 100.0 1.4E-37 4.9E-42 305.4 31.3 243 220-472 91-344 (357)
25 3bg1_A Protein SEC13 homolog; 100.0 1.7E-37 5.9E-42 299.7 30.0 262 218-485 8-306 (316)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-36 4.8E-41 297.0 36.3 251 218-471 56-335 (345)
27 3dm0_A Maltose-binding peripla 100.0 1.9E-36 6.7E-41 323.8 38.9 273 218-502 377-676 (694)
28 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-36 4.3E-41 299.5 34.0 250 218-471 3-274 (372)
29 2xzm_R RACK1; ribosome, transl 100.0 6.4E-36 2.2E-40 292.1 38.0 243 218-471 71-340 (343)
30 1r5m_A SIR4-interacting protei 100.0 3.7E-36 1.3E-40 301.2 36.8 270 220-502 42-408 (425)
31 3zwl_B Eukaryotic translation 100.0 7.3E-36 2.5E-40 293.2 37.7 271 219-502 28-329 (369)
32 2hes_X YDR267CP; beta-propelle 100.0 3.1E-36 1.1E-40 292.7 34.6 242 221-469 56-326 (330)
33 2ymu_A WD-40 repeat protein; u 100.0 7.7E-36 2.6E-40 312.0 39.8 263 218-502 298-563 (577)
34 4aow_A Guanine nucleotide-bind 100.0 2.7E-35 9.4E-40 286.2 40.2 268 219-502 34-320 (340)
35 3dwl_C Actin-related protein 2 100.0 6E-38 2E-42 310.1 21.3 246 218-470 6-280 (377)
36 2pbi_B Guanine nucleotide-bind 100.0 5.3E-36 1.8E-40 294.0 35.0 239 220-468 103-354 (354)
37 1erj_A Transcriptional repress 100.0 1.1E-35 3.7E-40 296.1 37.7 242 223-470 123-388 (393)
38 3ei3_B DNA damage-binding prot 100.0 8.8E-36 3E-40 295.4 35.7 268 218-502 68-366 (383)
39 3odt_A Protein DOA1; ubiquitin 100.0 1.4E-35 4.9E-40 284.6 36.0 266 216-503 11-281 (313)
40 3k26_A Polycomb protein EED; W 100.0 4E-36 1.4E-40 294.9 31.6 277 217-502 12-349 (366)
41 1sq9_A Antiviral protein SKI8; 100.0 6.5E-36 2.2E-40 297.4 33.3 277 217-500 10-366 (397)
42 3f3f_A Nucleoporin SEH1; struc 100.0 6.1E-35 2.1E-39 283.7 37.1 266 217-485 5-350 (351)
43 1gxr_A ESG1, transducin-like e 100.0 6.5E-35 2.2E-39 282.9 37.1 265 220-502 48-320 (337)
44 4ery_A WD repeat-containing pr 100.0 4E-35 1.4E-39 282.3 35.3 243 218-469 60-310 (312)
45 3jrp_A Fusion protein of prote 100.0 2.1E-35 7.1E-40 291.3 33.8 260 218-482 6-297 (379)
46 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-35 9.2E-40 320.5 37.3 268 218-501 8-283 (814)
47 2pm9_A Protein WEB1, protein t 100.0 6.9E-36 2.4E-40 299.0 29.8 250 221-472 65-338 (416)
48 2ymu_A WD-40 repeat protein; u 100.0 1.4E-34 4.8E-39 302.4 41.0 262 219-502 258-522 (577)
49 3i2n_A WD repeat-containing pr 100.0 2.9E-35 9.9E-40 287.9 31.7 279 218-502 13-335 (357)
50 3dw8_B Serine/threonine-protei 100.0 2.9E-35 9.8E-40 297.5 32.2 248 221-470 26-372 (447)
51 3vl1_A 26S proteasome regulato 100.0 4.4E-34 1.5E-38 286.5 39.6 268 225-501 99-398 (420)
52 3iz6_a 40S ribosomal protein R 100.0 1.1E-35 3.8E-40 294.6 27.4 244 219-470 104-374 (380)
53 1yfq_A Cell cycle arrest prote 100.0 1.1E-34 3.9E-39 282.3 33.1 266 217-502 5-306 (342)
54 4e54_B DNA damage-binding prot 100.0 1.9E-35 6.4E-40 298.4 28.1 272 220-503 116-415 (435)
55 3dm0_A Maltose-binding peripla 100.0 9.3E-35 3.2E-39 310.8 34.4 245 219-469 426-691 (694)
56 3gre_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 296.8 27.2 258 218-484 58-368 (437)
57 3k26_A Polycomb protein EED; W 100.0 6E-35 2.1E-39 286.5 26.9 243 222-469 68-364 (366)
58 1gxr_A ESG1, transducin-like e 100.0 3.2E-33 1.1E-37 271.0 38.5 236 221-469 95-335 (337)
59 4aez_A CDC20, WD repeat-contai 100.0 1E-33 3.5E-38 282.6 35.8 249 220-482 131-387 (401)
60 2aq5_A Coronin-1A; WD40 repeat 100.0 4.5E-34 1.5E-38 285.2 32.6 271 226-502 37-327 (402)
61 3vl1_A 26S proteasome regulato 100.0 3.9E-35 1.3E-39 294.2 24.7 262 225-501 58-347 (420)
62 4aez_A CDC20, WD repeat-contai 100.0 1.7E-33 5.9E-38 280.9 33.8 258 226-502 96-363 (401)
63 2pm9_A Protein WEB1, protein t 100.0 1.4E-34 4.9E-39 289.4 25.0 266 224-500 13-317 (416)
64 1sq9_A Antiviral protein SKI8; 100.0 1.5E-33 5E-38 280.4 31.4 250 219-471 58-395 (397)
65 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-34 3.7E-39 297.5 23.8 240 222-469 132-426 (524)
66 3v7d_B Cell division control p 100.0 9.6E-33 3.3E-37 280.8 37.6 260 219-497 158-442 (464)
67 3lrv_A PRE-mRNA-splicing facto 100.0 6.5E-34 2.2E-38 277.8 26.8 257 230-497 43-320 (343)
68 3v7d_B Cell division control p 100.0 1.2E-32 4.2E-37 279.9 37.2 265 219-502 117-405 (464)
69 1r5m_A SIR4-interacting protei 100.0 5.9E-33 2E-37 277.8 33.7 241 222-469 107-423 (425)
70 3i2n_A WD repeat-containing pr 100.0 2E-33 6.8E-38 274.8 29.2 240 221-470 63-352 (357)
71 4aow_A Guanine nucleotide-bind 100.0 3.9E-32 1.3E-36 263.9 37.9 246 219-472 82-338 (340)
72 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-33 5.8E-38 281.0 28.8 247 218-471 76-342 (402)
73 3sfz_A APAF-1, apoptotic pepti 100.0 7.2E-33 2.5E-37 315.0 37.7 269 219-502 611-896 (1249)
74 4a11_B DNA excision repair pro 100.0 2E-32 6.7E-37 272.7 36.1 272 216-502 36-348 (408)
75 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.6E-33 1.6E-37 282.2 31.8 269 224-502 5-368 (450)
76 4gga_A P55CDC, cell division c 100.0 2.2E-32 7.6E-37 274.6 36.5 243 220-470 144-394 (420)
77 3mmy_A MRNA export factor; mRN 100.0 1.9E-32 6.4E-37 268.8 34.2 269 216-502 32-329 (368)
78 1p22_A F-BOX/WD-repeat protein 100.0 2.7E-32 9.1E-37 275.3 35.6 258 218-496 128-393 (435)
79 3ei3_B DNA damage-binding prot 100.0 6.8E-33 2.3E-37 274.6 30.7 237 220-469 115-380 (383)
80 4h5i_A Guanine nucleotide-exch 100.0 1.3E-32 4.5E-37 270.8 31.6 209 267-485 135-361 (365)
81 2pm7_B Protein transport prote 100.0 3.1E-32 1.1E-36 260.3 32.9 233 259-502 3-268 (297)
82 3jro_A Fusion protein of prote 100.0 1.9E-33 6.6E-38 302.7 26.9 250 218-471 4-285 (753)
83 1k8k_C P40, ARP2/3 complex 41 100.0 2.2E-32 7.4E-37 269.2 32.1 246 219-471 48-361 (372)
84 4gga_A P55CDC, cell division c 100.0 6.3E-32 2.1E-36 271.3 36.0 257 225-502 107-378 (420)
85 3dwl_C Actin-related protein 2 100.0 2.1E-33 7.2E-38 277.5 24.6 208 218-428 50-280 (377)
86 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-31 6.3E-36 269.9 38.5 259 218-502 154-421 (445)
87 2xyi_A Probable histone-bindin 100.0 1.1E-32 3.7E-37 277.8 29.0 245 220-471 125-410 (430)
88 3zwl_B Eukaryotic translation 100.0 1.9E-31 6.6E-36 261.6 37.1 245 218-471 69-346 (369)
89 3mkq_A Coatomer beta'-subunit; 100.0 8.7E-32 3E-36 292.9 37.0 244 219-470 51-301 (814)
90 3sfz_A APAF-1, apoptotic pepti 100.0 8.5E-32 2.9E-36 306.2 37.7 275 219-502 653-1017(1249)
91 1pgu_A Actin interacting prote 100.0 8E-32 2.7E-36 283.3 34.6 266 219-497 14-307 (615)
92 2j04_B YDR362CP, TAU91; beta p 100.0 5.2E-33 1.8E-37 285.0 24.6 244 220-469 204-515 (524)
93 1pgu_A Actin interacting prote 100.0 1.6E-31 5.5E-36 281.0 35.4 263 218-499 58-349 (615)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.5E-31 1.9E-35 266.5 37.8 254 219-498 114-372 (445)
95 3odt_A Protein DOA1; ubiquitin 100.0 4.5E-31 1.6E-35 253.1 34.1 236 218-471 54-296 (313)
96 4e54_B DNA damage-binding prot 100.0 3.3E-32 1.1E-36 274.6 25.7 245 219-470 160-429 (435)
97 4ggc_A P55CDC, cell division c 100.0 1.4E-30 4.9E-35 250.4 35.8 256 226-502 28-298 (318)
98 3bg1_A Protein SEC13 homolog; 100.0 3.7E-32 1.3E-36 262.2 22.7 233 260-502 8-276 (316)
99 3dw8_B Serine/threonine-protei 100.0 1.5E-31 5.2E-36 270.2 28.1 236 224-469 94-444 (447)
100 1p22_A F-BOX/WD-repeat protein 100.0 5.8E-31 2E-35 265.5 31.3 235 218-471 168-414 (435)
101 2oaj_A Protein SNI1; WD40 repe 100.0 3.5E-31 1.2E-35 289.4 31.5 276 222-503 97-590 (902)
102 4gq1_A NUP37; propeller, trans 100.0 1.7E-31 5.9E-36 265.6 25.3 243 222-469 88-387 (393)
103 4ggc_A P55CDC, cell division c 100.0 3.1E-30 1.1E-34 248.1 33.2 242 220-469 64-313 (318)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-30 8.3E-35 262.2 33.1 249 220-476 99-396 (450)
105 3gre_A Serine/threonine-protei 100.0 4E-31 1.4E-35 266.6 27.2 240 221-468 109-437 (437)
106 2j04_A TAU60, YPL007P, hypothe 100.0 3.1E-31 1.1E-35 266.1 24.5 249 223-502 15-281 (588)
107 3jrp_A Fusion protein of prote 100.0 3.6E-30 1.2E-34 253.7 31.8 238 256-502 2-270 (379)
108 2oaj_A Protein SNI1; WD40 repe 100.0 8.6E-30 2.9E-34 278.4 37.5 244 219-469 13-310 (902)
109 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-29 4E-34 246.3 33.7 236 260-502 6-320 (351)
110 4h5i_A Guanine nucleotide-exch 100.0 2.1E-30 7.2E-35 255.1 27.0 206 221-430 131-344 (365)
111 1yfq_A Cell cycle arrest prote 100.0 3.9E-30 1.3E-34 250.2 26.8 230 220-463 53-313 (342)
112 3vu4_A KMHSV2; beta-propeller 100.0 2.9E-29 9.8E-34 246.1 31.9 241 220-472 16-337 (355)
113 2xyi_A Probable histone-bindin 100.0 2.6E-29 8.8E-34 253.1 31.3 237 259-501 122-391 (430)
114 4a11_B DNA excision repair pro 100.0 7.2E-29 2.5E-33 246.9 32.9 253 220-482 96-372 (408)
115 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-30 5.5E-35 260.9 19.0 196 221-428 83-296 (588)
116 3bws_A Protein LP49; two-domai 100.0 3.1E-28 1.1E-32 245.0 32.7 259 224-502 123-414 (433)
117 3mmy_A MRNA export factor; mRN 100.0 8E-29 2.7E-33 242.8 27.1 234 218-463 81-336 (368)
118 1l0q_A Surface layer protein; 100.0 5.6E-27 1.9E-31 232.5 37.6 243 224-485 32-285 (391)
119 2w18_A PALB2, fancn, partner a 100.0 8.9E-28 3E-32 226.8 29.7 236 226-469 42-355 (356)
120 3jro_A Fusion protein of prote 100.0 1.3E-28 4.6E-33 265.0 27.1 237 258-502 2-268 (753)
121 1l0q_A Surface layer protein; 100.0 6.7E-27 2.3E-31 231.9 34.7 245 236-502 3-257 (391)
122 3lrv_A PRE-mRNA-splicing facto 100.0 3.6E-28 1.2E-32 237.1 24.5 229 224-469 77-331 (343)
123 4gq1_A NUP37; propeller, trans 100.0 1.4E-28 4.7E-33 244.7 21.5 221 272-503 96-374 (393)
124 2w18_A PALB2, fancn, partner a 100.0 7.7E-28 2.6E-32 227.2 24.5 201 222-427 110-355 (356)
125 3bws_A Protein LP49; two-domai 100.0 1.4E-26 4.7E-31 232.9 34.2 236 220-469 166-430 (433)
126 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-25 3.7E-30 220.6 28.7 211 249-471 3-271 (355)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.1E-24 1.1E-28 214.7 32.7 242 235-499 143-408 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-24 5.2E-29 216.9 25.9 257 224-502 63-367 (415)
129 3vgz_A Uncharacterized protein 99.9 4.5E-23 1.5E-27 201.1 34.4 260 223-502 40-327 (353)
130 1ri6_A Putative isomerase YBHE 99.9 5.1E-23 1.7E-27 199.6 31.5 270 222-501 36-335 (343)
131 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-23 4.5E-28 226.1 29.4 268 223-501 36-392 (741)
132 1nir_A Nitrite reductase; hemo 99.9 2.6E-23 8.9E-28 214.6 29.9 263 231-502 145-434 (543)
133 1nir_A Nitrite reductase; hemo 99.9 6E-23 2E-27 211.9 30.8 258 226-502 181-492 (543)
134 2ojh_A Uncharacterized protein 99.9 1.8E-23 6E-28 198.0 24.5 233 221-463 39-292 (297)
135 2oit_A Nucleoporin 214KDA; NH2 99.9 4.2E-23 1.5E-27 207.3 26.6 242 223-471 36-333 (434)
136 3u4y_A Uncharacterized protein 99.9 5.7E-22 2E-26 191.7 32.9 256 230-502 4-286 (331)
137 2ojh_A Uncharacterized protein 99.9 1E-22 3.5E-27 192.7 24.5 245 240-502 17-285 (297)
138 3u4y_A Uncharacterized protein 99.9 8.2E-22 2.8E-26 190.6 30.6 240 223-469 40-302 (331)
139 1ri6_A Putative isomerase YBHE 99.9 8.4E-22 2.9E-26 191.0 29.7 255 237-502 7-290 (343)
140 3hfq_A Uncharacterized protein 99.9 3.9E-21 1.3E-25 187.3 32.2 244 223-471 39-317 (347)
141 1xfd_A DIP, dipeptidyl aminope 99.9 7.2E-23 2.4E-27 219.7 21.5 271 225-502 18-373 (723)
142 1jmx_B Amine dehydrogenase; ox 99.9 7.6E-22 2.6E-26 191.9 24.8 253 228-497 4-347 (349)
143 2ecf_A Dipeptidyl peptidase IV 99.9 5E-22 1.7E-26 213.7 25.2 260 225-502 110-438 (741)
144 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-21 5.9E-26 208.4 28.0 261 224-502 82-414 (706)
145 3scy_A Hypothetical bacterial 99.9 3.9E-20 1.3E-24 181.3 34.3 264 222-497 48-360 (361)
146 3vgz_A Uncharacterized protein 99.9 1.5E-20 5E-25 183.2 31.0 230 225-463 90-334 (353)
147 1pby_B Quinohemoprotein amine 99.9 6.3E-21 2.2E-25 184.3 28.0 231 236-485 2-320 (337)
148 1xfd_A DIP, dipeptidyl aminope 99.9 3.6E-21 1.2E-25 206.5 25.4 267 225-502 62-423 (723)
149 3o4h_A Acylamino-acid-releasin 99.9 3.6E-21 1.2E-25 201.3 22.3 250 223-502 21-295 (582)
150 1k32_A Tricorn protease; prote 99.9 1.2E-20 4E-25 210.5 27.6 258 220-502 200-485 (1045)
151 2oit_A Nucleoporin 214KDA; NH2 99.9 4.4E-21 1.5E-25 192.6 21.1 217 245-472 23-279 (434)
152 3hfq_A Uncharacterized protein 99.9 1.5E-19 5E-24 176.1 31.0 254 244-502 15-299 (347)
153 1k32_A Tricorn protease; prote 99.9 3.4E-20 1.1E-24 206.8 27.7 260 222-502 294-621 (1045)
154 2z3z_A Dipeptidyl aminopeptida 99.9 3.5E-20 1.2E-24 198.3 26.4 241 222-470 119-434 (706)
155 1z68_A Fibroblast activation p 99.8 3.2E-20 1.1E-24 199.0 21.1 254 228-501 20-368 (719)
156 2bay_A PRE-mRNA splicing facto 99.8 1.6E-21 5.5E-26 135.3 5.9 56 1-56 4-59 (61)
157 3scy_A Hypothetical bacterial 99.8 1.8E-18 6.2E-23 169.4 28.9 263 235-502 13-319 (361)
158 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.4E-18 8.2E-23 168.9 28.5 242 224-471 40-341 (365)
159 4a5s_A Dipeptidyl peptidase 4 99.8 1.5E-18 5.2E-23 186.4 26.5 234 225-469 18-351 (740)
160 1z68_A Fibroblast activation p 99.8 2.7E-19 9.4E-24 191.8 19.8 267 225-502 61-423 (719)
161 3fvz_A Peptidyl-glycine alpha- 99.8 2.1E-17 7E-22 159.8 29.9 244 223-470 23-321 (329)
162 3pe7_A Oligogalacturonate lyas 99.8 3.2E-18 1.1E-22 169.1 24.7 257 229-502 41-364 (388)
163 1q7f_A NHL, brain tumor CG1071 99.8 9.4E-17 3.2E-21 151.7 33.1 238 221-469 27-278 (286)
164 1pby_B Quinohemoprotein amine 99.8 3.4E-18 1.2E-22 165.0 23.6 206 225-439 35-320 (337)
165 2oiz_A Aromatic amine dehydrog 99.8 4E-17 1.4E-21 159.8 28.6 238 243-502 29-361 (361)
166 1jmx_B Amine dehydrogenase; ox 99.8 1E-17 3.5E-22 162.6 24.0 208 225-439 44-335 (349)
167 3o4h_A Acylamino-acid-releasin 99.8 1.2E-17 4E-22 174.6 22.6 225 222-470 63-312 (582)
168 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.2E-16 1.1E-20 153.7 28.2 255 237-502 4-323 (365)
169 3e5z_A Putative gluconolactona 99.8 8.5E-16 2.9E-20 145.9 29.0 230 222-469 26-282 (296)
170 3no2_A Uncharacterized protein 99.8 2E-15 6.7E-20 141.8 30.7 252 234-497 4-274 (276)
171 3c5m_A Oligogalacturonate lyas 99.7 1.2E-17 3.9E-22 165.3 15.3 222 226-461 38-301 (396)
172 3azo_A Aminopeptidase; POP fam 99.7 4.2E-16 1.4E-20 165.3 27.4 262 220-494 20-341 (662)
173 3pe7_A Oligogalacturonate lyas 99.7 1.1E-16 3.6E-21 158.1 20.8 245 218-471 75-382 (388)
174 2dg1_A DRP35, lactonase; beta 99.7 9E-16 3.1E-20 148.3 26.4 263 224-501 6-292 (333)
175 2dg1_A DRP35, lactonase; beta 99.7 1.1E-14 3.7E-19 140.7 33.4 240 221-471 42-314 (333)
176 2xdw_A Prolyl endopeptidase; a 99.7 1.7E-15 5.7E-20 162.0 30.0 240 221-469 122-412 (710)
177 4a5s_A Dipeptidyl peptidase 4 99.7 3.1E-16 1.1E-20 168.5 23.3 265 227-502 65-429 (740)
178 3azo_A Aminopeptidase; POP fam 99.7 1.2E-15 4.1E-20 161.8 26.9 234 228-471 81-367 (662)
179 1rwi_B Serine/threonine-protei 99.7 5.8E-15 2E-19 137.9 27.8 234 225-470 25-263 (270)
180 2z2n_A Virginiamycin B lyase; 99.7 2.3E-13 7.8E-18 128.7 38.3 259 223-502 14-279 (299)
181 3c5m_A Oligogalacturonate lyas 99.7 6E-16 2.1E-20 152.9 19.9 238 228-477 85-388 (396)
182 1q7f_A NHL, brain tumor CG1071 99.7 3.1E-14 1.1E-18 134.3 30.5 224 263-502 27-264 (286)
183 2gop_A Trilobed protease; beta 99.7 5.2E-15 1.8E-19 143.6 25.3 229 224-485 59-339 (347)
184 3fvz_A Peptidyl-glycine alpha- 99.7 1.1E-14 3.6E-19 140.7 26.6 227 265-502 23-305 (329)
185 3dsm_A Uncharacterized protein 99.7 4.3E-14 1.5E-18 136.3 30.6 241 225-484 45-310 (328)
186 2gop_A Trilobed protease; beta 99.7 1.1E-14 3.7E-19 141.4 26.5 236 225-498 16-311 (347)
187 2oiz_A Aromatic amine dehydrog 99.7 8E-15 2.7E-19 143.4 25.5 219 228-455 54-360 (361)
188 3e5z_A Putative gluconolactona 99.7 3E-14 1E-18 135.2 26.9 227 256-501 18-269 (296)
189 1qks_A Cytochrome CD1 nitrite 99.7 1.8E-13 6E-18 141.0 31.9 262 232-501 164-452 (567)
190 2xdw_A Prolyl endopeptidase; a 99.6 5.8E-14 2E-18 150.1 29.3 257 233-501 81-392 (710)
191 2bkl_A Prolyl endopeptidase; m 99.6 2E-14 6.8E-19 153.3 25.4 239 220-469 117-395 (695)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4.5E-13 1.5E-17 127.8 29.6 232 224-469 18-297 (314)
193 3dsm_A Uncharacterized protein 99.6 3.5E-13 1.2E-17 129.9 28.1 243 243-499 15-277 (328)
194 1qks_A Cytochrome CD1 nitrite 99.6 1.7E-12 5.7E-17 133.7 34.2 266 225-501 198-515 (567)
195 2qc5_A Streptogramin B lactona 99.6 7.7E-12 2.6E-16 118.2 36.3 262 223-502 19-285 (300)
196 2z2n_A Virginiamycin B lyase; 99.6 7.2E-12 2.5E-16 118.3 35.5 234 223-469 56-293 (299)
197 2bkl_A Prolyl endopeptidase; m 99.6 1.5E-13 5.2E-18 146.4 24.6 254 233-501 77-375 (695)
198 2kr4_A Ubiquitin conjugation f 99.6 1.3E-15 4.6E-20 114.0 5.3 52 1-53 15-66 (85)
199 1yr2_A Prolyl oligopeptidase; 99.6 5.6E-13 1.9E-17 143.1 26.3 237 223-469 162-439 (741)
200 1xip_A Nucleoporin NUP159; bet 99.6 1.3E-13 4.6E-18 134.0 18.7 171 225-417 39-231 (388)
201 2kre_A Ubiquitin conjugation f 99.6 2.4E-15 8.2E-20 116.0 4.9 52 1-53 30-81 (100)
202 3no2_A Uncharacterized protein 99.5 9.3E-13 3.2E-17 123.4 23.4 208 276-502 4-226 (276)
203 3sjl_D Methylamine dehydrogena 99.5 2.4E-12 8.2E-17 124.7 25.8 254 228-499 82-384 (386)
204 3hrp_A Uncharacterized protein 99.5 1.4E-11 4.8E-16 122.3 31.3 240 224-469 131-408 (409)
205 1rwi_B Serine/threonine-protei 99.5 1.7E-12 5.8E-17 121.0 23.3 200 224-432 67-267 (270)
206 1wgm_A Ubiquitin conjugation f 99.5 4.9E-15 1.7E-19 113.8 4.8 52 1-53 23-75 (98)
207 3g4e_A Regucalcin; six bladed 99.5 6.3E-12 2.2E-16 119.2 26.5 224 225-462 14-261 (297)
208 2qc5_A Streptogramin B lactona 99.5 9.9E-11 3.4E-15 110.5 34.0 233 223-469 61-296 (300)
209 2mad_H Methylamine dehydrogena 99.5 7.7E-11 2.6E-15 115.3 33.9 239 228-482 70-357 (373)
210 3dr2_A Exported gluconolactona 99.5 1.3E-11 4.6E-16 117.4 26.2 229 224-468 45-303 (305)
211 2ghs_A AGR_C_1268P; regucalcin 99.5 6.2E-11 2.1E-15 114.0 30.4 221 226-462 51-291 (326)
212 2f42_A STIP1 homology and U-bo 99.5 2.4E-14 8.3E-19 121.4 5.2 52 1-53 107-159 (179)
213 2yu4_A E3 SUMO-protein ligase 99.5 3E-14 1E-18 109.1 4.7 53 1-53 8-69 (94)
214 3c75_H MADH, methylamine dehyd 99.5 1.2E-11 4E-16 122.0 24.6 238 233-482 82-409 (426)
215 2mad_H Methylamine dehydrogena 99.5 1.9E-10 6.6E-15 112.4 33.0 247 232-501 29-330 (373)
216 3sjl_D Methylamine dehydrogena 99.5 8.3E-12 2.8E-16 120.9 22.7 251 230-501 39-343 (386)
217 1yr2_A Prolyl oligopeptidase; 99.5 1.2E-11 4.1E-16 132.7 25.9 254 233-501 116-419 (741)
218 1xip_A Nucleoporin NUP159; bet 99.4 3.1E-12 1E-16 124.4 17.6 175 267-460 39-231 (388)
219 3g4e_A Regucalcin; six bladed 99.4 4.6E-10 1.6E-14 106.3 30.8 225 264-502 11-255 (297)
220 3iuj_A Prolyl endopeptidase; h 99.4 3E-11 1E-15 128.5 25.0 229 221-461 126-389 (693)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.2E-10 4.2E-15 110.8 25.7 222 265-501 17-280 (314)
222 2qe8_A Uncharacterized protein 99.3 1.7E-10 5.8E-15 111.8 23.9 235 224-463 17-311 (343)
223 3dr2_A Exported gluconolactona 99.3 2.5E-10 8.5E-15 108.6 24.6 223 260-501 39-289 (305)
224 2ghs_A AGR_C_1268P; regucalcin 99.3 2.5E-09 8.6E-14 102.7 28.8 216 268-501 51-284 (326)
225 1mda_H Methylamine dehydrogena 99.3 1.5E-10 5.2E-15 112.2 19.4 232 246-496 47-364 (368)
226 3hrp_A Uncharacterized protein 99.3 2E-09 6.7E-14 106.7 27.9 224 266-502 131-393 (409)
227 2ece_A 462AA long hypothetical 99.3 2.6E-09 8.9E-14 104.2 27.6 222 233-461 93-399 (462)
228 2hz6_A Endoplasmic reticulum t 99.3 2.5E-12 8.6E-17 125.9 5.6 203 234-456 8-217 (369)
229 2ece_A 462AA long hypothetical 99.2 1.2E-08 4.2E-13 99.4 27.3 224 275-502 93-394 (462)
230 2c2l_A CHIP, carboxy terminus 99.2 1E-11 3.5E-16 116.8 4.9 52 1-53 209-261 (281)
231 1kb0_A Quinohemoprotein alcoho 99.2 3.9E-09 1.3E-13 111.4 25.0 241 234-485 127-517 (677)
232 2qe8_A Uncharacterized protein 99.2 4.9E-09 1.7E-13 101.4 23.2 228 266-502 17-304 (343)
233 3c75_H MADH, methylamine dehyd 99.2 3E-09 1E-13 104.9 21.6 205 228-436 122-409 (426)
234 1yiq_A Quinohemoprotein alcoho 99.1 9.3E-09 3.2E-13 108.8 25.8 256 235-502 121-531 (689)
235 1t1h_A Gspef-atpub14, armadill 99.1 4.8E-11 1.6E-15 88.1 5.5 52 1-53 9-61 (78)
236 1npe_A Nidogen, entactin; glyc 99.1 3.2E-07 1.1E-11 85.1 32.2 245 236-500 2-262 (267)
237 3iuj_A Prolyl endopeptidase; h 99.1 3.8E-09 1.3E-13 112.2 21.1 193 263-469 126-357 (693)
238 1mda_H Methylamine dehydrogena 99.1 2.8E-09 9.6E-14 103.3 18.2 217 228-452 69-366 (368)
239 1fwx_A Nitrous oxide reductase 99.1 7.3E-09 2.5E-13 104.5 21.0 238 233-483 99-441 (595)
240 1fwx_A Nitrous oxide reductase 99.1 1.6E-08 5.5E-13 102.1 22.4 234 238-485 18-381 (595)
241 2iwa_A Glutamine cyclotransfer 99.1 4.7E-08 1.6E-12 89.6 23.1 198 225-430 22-238 (266)
242 3htk_C E3 SUMO-protein ligase 99.1 5.9E-11 2E-15 105.3 3.6 53 1-53 182-238 (267)
243 3nol_A Glutamine cyclotransfer 99.1 6.7E-08 2.3E-12 87.5 23.5 197 256-469 32-252 (262)
244 2iwa_A Glutamine cyclotransfer 99.0 1.2E-07 4.3E-12 86.8 25.2 200 256-469 10-235 (266)
245 3hxj_A Pyrrolo-quinoline quino 99.0 7.7E-09 2.6E-13 99.0 17.9 245 225-501 61-307 (330)
246 2hz6_A Endoplasmic reticulum t 99.0 6.6E-11 2.3E-15 115.8 3.3 186 276-483 8-200 (369)
247 1npe_A Nidogen, entactin; glyc 99.0 7.4E-07 2.5E-11 82.5 29.5 219 225-455 37-263 (267)
248 3m62_A Ubiquitin conjugation f 99.0 1.8E-10 6.3E-15 120.3 4.7 52 1-53 892-944 (968)
249 1kb0_A Quinohemoprotein alcoho 99.0 5.6E-08 1.9E-12 102.6 23.0 220 235-459 174-537 (677)
250 3hxj_A Pyrrolo-quinoline quino 99.0 5.3E-08 1.8E-12 93.1 20.9 213 235-469 107-322 (330)
251 2fp8_A Strictosidine synthase; 99.0 8.6E-07 2.9E-11 84.6 28.8 231 226-469 21-311 (322)
252 3q7m_A Lipoprotein YFGL, BAMB; 98.9 4.2E-07 1.4E-11 88.8 26.7 233 234-484 102-346 (376)
253 3nok_A Glutaminyl cyclase; bet 98.9 3.2E-07 1.1E-11 83.1 23.4 199 256-469 44-262 (268)
254 3nol_A Glutamine cyclotransfer 98.9 2.1E-07 7.2E-12 84.3 22.1 188 223-420 42-245 (262)
255 1yiq_A Quinohemoprotein alcoho 98.9 1.1E-07 3.7E-12 100.6 23.6 212 244-460 182-536 (689)
256 3mbr_X Glutamine cyclotransfer 98.9 6.1E-07 2.1E-11 80.6 24.8 199 256-469 10-231 (243)
257 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.1E-06 3.8E-11 85.7 26.9 223 235-471 53-296 (376)
258 4a2l_A BT_4663, two-component 98.9 1.1E-05 3.8E-10 87.0 36.7 242 223-470 262-525 (795)
259 3nok_A Glutaminyl cyclase; bet 98.8 4.9E-07 1.7E-11 81.9 20.6 188 223-420 54-255 (268)
260 4a2l_A BT_4663, two-component 98.8 1.1E-05 3.7E-10 87.1 35.3 265 223-501 309-598 (795)
261 2p4o_A Hypothetical protein; p 98.8 1E-05 3.6E-10 76.4 30.2 229 225-463 33-278 (306)
262 1kv9_A Type II quinohemoprotei 98.8 8.4E-07 2.9E-11 93.5 24.3 240 235-485 117-498 (668)
263 3mbr_X Glutamine cyclotransfer 98.8 3.5E-06 1.2E-10 75.6 23.8 188 224-420 21-224 (243)
264 3v64_C Agrin; beta propeller, 98.8 4E-05 1.4E-09 73.9 33.1 256 224-498 34-296 (349)
265 2xe4_A Oligopeptidase B; hydro 98.8 3.4E-06 1.2E-10 90.2 27.7 195 225-427 175-398 (751)
266 2p4o_A Hypothetical protein; p 98.7 1.4E-05 4.9E-10 75.4 27.3 224 256-501 23-270 (306)
267 2xbg_A YCF48-like protein; pho 98.7 5.6E-05 1.9E-09 72.1 31.5 262 223-501 35-305 (327)
268 2fp8_A Strictosidine synthase; 98.7 6.3E-06 2.2E-10 78.5 24.7 225 267-501 20-295 (322)
269 1k3i_A Galactose oxidase precu 98.7 7.4E-07 2.5E-11 93.9 19.2 263 228-502 190-524 (656)
270 2ad6_A Methanol dehydrogenase 98.7 5.2E-06 1.8E-10 85.7 24.9 238 235-484 115-503 (571)
271 1ijq_A LDL receptor, low-densi 98.7 0.00021 7.2E-09 67.7 34.4 221 237-468 3-235 (316)
272 3ztg_A E3 ubiquitin-protein li 98.7 2.2E-08 7.6E-13 76.2 5.2 51 1-51 14-67 (92)
273 3v65_B Low-density lipoprotein 98.7 5.2E-05 1.8E-09 74.2 30.7 255 225-498 78-339 (386)
274 2djb_A Polycomb group ring fin 98.6 3.9E-08 1.3E-12 70.9 5.8 53 1-53 16-68 (72)
275 3v9f_A Two-component system se 98.6 7.8E-05 2.7E-09 80.2 33.9 266 223-501 312-595 (781)
276 3qqz_A Putative uncharacterize 98.6 2.3E-05 7.9E-10 71.3 24.9 201 224-427 27-251 (255)
277 3p5b_L Low density lipoprotein 98.6 0.0002 6.7E-09 70.4 33.4 247 237-498 85-341 (400)
278 2yur_A Retinoblastoma-binding 98.6 5.9E-08 2E-12 70.4 5.5 52 1-52 16-70 (74)
279 1w6s_A Methanol dehydrogenase 98.6 1.5E-05 5.2E-10 82.3 25.5 235 238-484 124-512 (599)
280 1jm7_A BRCA1, breast cancer ty 98.6 8.7E-08 3E-12 76.0 6.9 52 1-53 22-76 (112)
281 2y43_A E3 ubiquitin-protein li 98.6 6.1E-08 2.1E-12 74.9 5.0 52 1-52 23-74 (99)
282 3tc9_A Hypothetical hydrolase; 98.5 8.4E-05 2.9E-09 73.8 29.0 235 225-469 138-428 (430)
283 1flg_A Protein (quinoprotein e 98.5 3.7E-05 1.3E-09 79.4 27.2 239 235-484 117-525 (582)
284 3lrq_A E3 ubiquitin-protein li 98.5 8E-08 2.7E-12 74.2 5.3 53 1-53 23-76 (100)
285 3qqz_A Putative uncharacterize 98.5 0.00017 5.7E-09 65.6 28.0 204 260-469 21-249 (255)
286 2xeu_A Ring finger protein 4; 98.5 5.6E-08 1.9E-12 68.3 4.0 52 1-53 4-62 (64)
287 3v9f_A Two-component system se 98.5 0.00013 4.5E-09 78.4 32.2 266 223-501 257-551 (781)
288 2ecy_A TNF receptor-associated 98.5 4.3E-08 1.5E-12 69.4 3.2 48 2-50 17-65 (66)
289 4hw6_A Hypothetical protein, I 98.5 0.00015 5.2E-09 71.9 29.3 236 225-469 140-431 (433)
290 1kv9_A Type II quinohemoprotei 98.5 1.1E-05 3.6E-10 85.1 22.0 213 244-461 177-520 (668)
291 1z6u_A NP95-like ring finger p 98.5 1.2E-07 4.2E-12 78.9 5.6 47 1-48 79-126 (150)
292 3hct_A TNF receptor-associated 98.5 1E-07 3.4E-12 76.2 4.8 52 1-53 19-71 (118)
293 3ng2_A RNF4, snurf, ring finge 98.5 8.4E-08 2.9E-12 69.0 3.9 52 1-53 11-69 (71)
294 2csy_A Zinc finger protein 183 98.5 1.6E-07 5.5E-12 69.5 5.5 45 1-46 16-60 (81)
295 3v64_C Agrin; beta propeller, 98.5 0.00017 6E-09 69.3 28.5 205 225-438 74-284 (349)
296 3v65_B Low-density lipoprotein 98.5 0.00011 3.9E-09 71.7 27.4 206 224-438 116-327 (386)
297 2ecw_A Tripartite motif-contai 98.5 1.8E-07 6E-12 70.0 5.5 52 1-53 20-77 (85)
298 3fl2_A E3 ubiquitin-protein li 98.5 1.6E-07 5.5E-12 75.8 5.5 46 1-47 53-99 (124)
299 3sov_A LRP-6, low-density lipo 98.5 0.00017 5.7E-09 68.5 27.3 214 244-469 12-236 (318)
300 4ayc_A E3 ubiquitin-protein li 98.4 1.5E-07 5E-12 77.5 4.6 45 1-46 54-98 (138)
301 2d8t_A Dactylidin, ring finger 98.4 9.6E-08 3.3E-12 68.6 3.1 52 1-53 16-67 (71)
302 2ysl_A Tripartite motif-contai 98.4 1.9E-07 6.6E-12 67.5 4.7 49 1-50 21-72 (73)
303 1rmd_A RAG1; V(D)J recombinati 98.4 2.5E-07 8.4E-12 73.8 5.5 52 1-53 24-76 (116)
304 2ad6_A Methanol dehydrogenase 98.4 3.9E-05 1.3E-09 79.1 23.4 218 236-459 161-523 (571)
305 3m0c_C LDL receptor, low-densi 98.4 0.00087 3E-08 71.4 33.4 225 237-470 397-629 (791)
306 2ecv_A Tripartite motif-contai 98.4 2.7E-07 9.2E-12 69.0 4.7 52 1-53 20-77 (85)
307 3amr_A 3-phytase; beta-propell 98.4 0.00016 5.6E-09 68.2 24.3 193 234-437 39-272 (355)
308 1ijq_A LDL receptor, low-densi 98.4 0.0008 2.7E-08 63.7 29.5 204 224-437 30-246 (316)
309 2ckl_B Ubiquitin ligase protei 98.4 4.4E-07 1.5E-11 77.3 5.9 47 2-48 56-103 (165)
310 2ckl_A Polycomb group ring fin 98.4 4.1E-07 1.4E-11 71.4 5.2 48 1-48 16-63 (108)
311 2egp_A Tripartite motif-contai 98.4 6.8E-08 2.3E-12 71.2 0.6 52 1-53 13-71 (79)
312 3sre_A PON1, serum paraoxonase 98.3 0.00013 4.5E-09 69.8 23.5 171 285-463 81-287 (355)
313 3p5b_L Low density lipoprotein 98.3 0.0011 3.6E-08 65.1 30.6 207 223-438 111-329 (400)
314 2ct2_A Tripartite motif protei 98.3 8.9E-07 3E-11 66.6 6.5 54 1-55 16-76 (88)
315 1k3i_A Galactose oxidase precu 98.3 2.1E-05 7.1E-10 82.8 19.3 236 226-462 245-530 (656)
316 1flg_A Protein (quinoprotein e 98.3 9.3E-05 3.2E-09 76.4 23.1 218 237-460 170-547 (582)
317 2p9w_A MAL S 1 allergenic prot 98.3 0.00035 1.2E-08 65.4 24.3 201 227-429 16-265 (334)
318 3sov_A LRP-6, low-density lipo 98.3 0.00076 2.6E-08 63.8 27.3 205 225-438 36-247 (318)
319 1w6s_A Methanol dehydrogenase 98.3 9.4E-05 3.2E-09 76.3 22.5 212 243-460 180-534 (599)
320 2xbg_A YCF48-like protein; pho 98.3 0.0011 3.9E-08 62.9 28.5 231 224-469 80-318 (327)
321 2xe4_A Oligopeptidase B; hydro 98.3 7.8E-05 2.7E-09 79.7 22.4 192 267-469 175-396 (751)
322 3kya_A Putative phosphatase; s 98.3 0.00091 3.1E-08 66.7 28.4 239 225-469 140-473 (496)
323 3amr_A 3-phytase; beta-propell 98.3 0.00049 1.7E-08 65.0 24.5 197 276-483 39-272 (355)
324 1g25_A CDK-activating kinase a 98.2 7.2E-07 2.5E-11 62.7 3.7 52 1-53 4-61 (65)
325 3hcs_A TNF receptor-associated 98.2 9.7E-07 3.3E-11 75.6 4.8 52 1-53 19-71 (170)
326 2ism_A Putative oxidoreductase 98.2 0.00042 1.4E-08 66.7 23.6 226 225-462 32-334 (352)
327 1n7d_A LDL receptor, low-densi 98.2 1.3E-05 4.6E-10 84.6 13.4 240 244-498 385-635 (699)
328 2vpj_A Kelch-like protein 12; 98.2 0.0015 5.2E-08 61.1 26.2 239 234-484 14-289 (301)
329 2ysj_A Tripartite motif-contai 98.1 2.3E-06 7.8E-11 59.7 4.6 40 1-41 21-63 (63)
330 2ea6_A Ring finger protein 4; 98.1 1.6E-06 5.3E-11 61.8 3.7 44 2-46 17-67 (69)
331 3m0c_C LDL receptor, low-densi 98.1 0.0019 6.4E-08 68.8 28.4 204 224-437 424-640 (791)
332 3ii7_A Kelch-like protein 7; p 98.1 0.0039 1.3E-07 58.4 28.1 234 236-485 13-284 (306)
333 1jm7_B BARD1, BRCA1-associated 98.1 7.9E-07 2.7E-11 70.8 1.3 50 1-52 23-72 (117)
334 2ect_A Ring finger protein 126 98.1 3.4E-06 1.2E-10 61.7 4.6 51 2-53 17-70 (78)
335 3a9g_A Putative uncharacterize 98.0 0.0042 1.4E-07 59.7 27.4 227 225-461 30-330 (354)
336 1chc_A Equine herpes virus-1 r 98.0 5.6E-06 1.9E-10 58.7 5.1 45 2-46 7-51 (68)
337 3knv_A TNF receptor-associated 98.0 1.3E-06 4.5E-11 71.7 1.3 49 1-50 32-81 (141)
338 1iym_A EL5; ring-H2 finger, ub 98.0 4.5E-06 1.5E-10 56.3 3.7 46 2-47 7-55 (55)
339 4ap4_A E3 ubiquitin ligase RNF 98.0 3.1E-06 1.1E-10 69.2 3.5 54 1-55 8-68 (133)
340 2p9w_A MAL S 1 allergenic prot 97.9 0.0037 1.3E-07 58.4 23.3 163 264-429 11-215 (334)
341 1zgk_A Kelch-like ECH-associat 97.9 0.0051 1.7E-07 57.7 25.1 237 232-484 22-298 (308)
342 4a0p_A LRP6, LRP-6, low-densit 97.9 0.022 7.4E-07 59.1 31.8 219 237-470 8-234 (628)
343 3tc9_A Hypothetical hydrolase; 97.9 0.00044 1.5E-08 68.6 18.3 152 267-428 138-300 (430)
344 2ecm_A Ring finger and CHY zin 97.9 1.2E-05 3.9E-10 54.2 4.7 44 2-46 7-54 (55)
345 3sre_A PON1, serum paraoxonase 97.9 0.0033 1.1E-07 60.0 23.1 195 225-428 51-297 (355)
346 4hw6_A Hypothetical protein, I 97.9 0.0013 4.4E-08 65.2 21.0 151 267-428 140-303 (433)
347 2ecl_A Ring-box protein 2; RNF 97.9 7.9E-06 2.7E-10 60.1 3.7 49 2-50 17-79 (81)
348 2ecj_A Tripartite motif-contai 97.9 6E-06 2.1E-10 56.4 2.8 40 1-41 16-58 (58)
349 3l11_A E3 ubiquitin-protein li 97.8 3E-06 1E-10 67.2 0.9 45 2-47 17-62 (115)
350 1x4j_A Ring finger protein 38; 97.8 1.6E-05 5.5E-10 57.5 4.5 46 2-48 25-73 (75)
351 1n7d_A LDL receptor, low-densi 97.8 0.00011 3.7E-09 77.6 12.6 204 225-438 407-623 (699)
352 3s94_A LRP-6, low-density lipo 97.8 0.02 6.7E-07 59.4 29.0 215 244-469 17-241 (619)
353 2l0b_A E3 ubiquitin-protein li 97.8 1.6E-05 5.4E-10 60.0 4.2 45 2-47 42-89 (91)
354 2xn4_A Kelch-like protein 2; s 97.8 0.0079 2.7E-07 56.1 24.0 230 235-480 16-283 (302)
355 2ecn_A Ring finger protein 141 97.8 4.2E-06 1.4E-10 59.7 0.8 51 1-53 16-66 (70)
356 4a0p_A LRP6, LRP-6, low-densit 97.8 0.027 9.4E-07 58.4 29.7 198 224-433 37-241 (628)
357 4ap4_A E3 ubiquitin ligase RNF 97.7 1.5E-05 5.3E-10 65.0 3.6 52 1-53 73-131 (133)
358 3s94_A LRP-6, low-density lipo 97.7 0.011 3.9E-07 61.2 25.1 200 224-433 40-247 (619)
359 2g8s_A Glucose/sorbosone dehyd 97.7 0.017 5.9E-07 55.3 24.7 237 225-469 19-350 (353)
360 2ep4_A Ring finger protein 24; 97.7 6.4E-05 2.2E-09 54.1 5.6 44 2-46 17-63 (74)
361 2kiz_A E3 ubiquitin-protein li 97.7 7.4E-05 2.5E-09 52.9 5.5 45 2-47 16-63 (69)
362 2ism_A Putative oxidoreductase 97.6 0.052 1.8E-06 51.9 26.7 226 266-502 31-328 (352)
363 3a9g_A Putative uncharacterize 97.6 0.063 2.2E-06 51.3 28.1 224 266-502 29-325 (354)
364 2xzh_A Clathrin heavy chain 1; 97.5 0.058 2E-06 50.1 29.4 226 228-469 71-328 (365)
365 1bor_A Transcription factor PM 97.5 2E-05 6.7E-10 53.2 0.3 44 1-48 7-50 (56)
366 3ott_A Two-component system se 97.5 0.17 5.8E-06 53.8 32.1 223 224-460 63-296 (758)
367 4asc_A Kelch repeat and BTB do 97.4 0.063 2.2E-06 50.2 24.7 233 237-483 7-287 (315)
368 2vpj_A Kelch-like protein 12; 97.4 0.026 9E-07 52.4 21.6 186 234-431 62-280 (301)
369 1bpo_A Protein (clathrin); cla 97.4 0.1 3.5E-06 50.4 30.4 228 228-469 70-327 (494)
370 3kya_A Putative phosphatase; s 97.4 0.013 4.5E-07 58.4 19.7 155 312-470 140-340 (496)
371 3dpl_R Ring-box protein 1; ubi 97.4 0.00013 4.5E-09 56.2 4.1 46 2-47 39-101 (106)
372 1e4u_A Transcriptional repress 97.4 0.00013 4.4E-09 52.8 3.5 52 1-52 12-67 (78)
373 2vje_A E3 ubiquitin-protein li 97.3 0.00023 7.9E-09 49.3 4.5 44 2-46 10-56 (64)
374 2uvk_A YJHT; unknown function, 97.3 0.016 5.4E-07 55.5 19.1 243 234-485 19-354 (357)
375 2vje_B MDM4 protein; proto-onc 97.3 0.00022 7.4E-09 49.3 4.1 44 2-46 9-55 (63)
376 3das_A Putative oxidoreductase 97.3 0.13 4.4E-06 48.8 26.9 229 224-461 32-326 (347)
377 1wim_A KIAA0161 protein; ring 97.3 0.00014 4.9E-09 55.0 3.3 51 1-51 6-70 (94)
378 3ii7_A Kelch-like protein 7; p 97.3 0.062 2.1E-06 50.0 22.2 186 234-431 55-274 (306)
379 1v87_A Deltex protein 2; ring- 97.2 0.00015 5.2E-09 57.1 3.2 45 2-47 27-94 (114)
380 2xn4_A Kelch-like protein 2; s 97.2 0.029 1E-06 52.2 19.6 186 234-431 61-278 (302)
381 3pbp_A Nucleoporin NUP82; beta 97.2 0.045 1.5E-06 52.8 20.2 146 276-425 31-208 (452)
382 4ic3_A E3 ubiquitin-protein li 97.2 0.00017 6E-09 51.7 2.6 41 1-46 25-66 (74)
383 2woz_A Kelch repeat and BTB do 97.1 0.088 3E-06 49.3 21.0 227 237-479 18-293 (318)
384 1zgk_A Kelch-like ECH-associat 97.0 0.074 2.5E-06 49.6 20.0 186 234-431 70-289 (308)
385 2zwa_A Leucine carboxyl methyl 97.0 0.037 1.3E-06 58.2 19.0 227 233-463 396-675 (695)
386 3pbp_A Nucleoporin NUP82; beta 96.9 0.044 1.5E-06 52.9 17.4 151 232-384 29-208 (452)
387 1bpo_A Protein (clathrin); cla 96.9 0.32 1.1E-05 47.0 24.8 200 225-431 107-333 (494)
388 2ecg_A Baculoviral IAP repeat- 96.9 0.00049 1.7E-08 49.5 3.0 41 2-47 27-68 (75)
389 4a0k_B E3 ubiquitin-protein li 96.9 0.00016 5.6E-09 56.5 0.0 46 2-47 50-112 (117)
390 4asc_A Kelch repeat and BTB do 96.8 0.22 7.6E-06 46.4 21.5 188 232-431 43-279 (315)
391 3ei3_A DNA damage-binding prot 96.8 0.96 3.3E-05 50.3 30.7 207 280-500 709-981 (1158)
392 2g8s_A Glucose/sorbosone dehyd 96.8 0.39 1.3E-05 45.7 26.1 150 266-417 18-215 (353)
393 3ei3_A DNA damage-binding prot 96.6 1.2 4.3E-05 49.4 35.8 260 223-497 553-894 (1158)
394 2uvk_A YJHT; unknown function, 96.6 0.086 3E-06 50.3 17.3 198 234-438 65-351 (357)
395 3ott_A Two-component system se 96.6 0.96 3.3E-05 47.9 30.6 235 225-469 192-446 (758)
396 1cru_A Protein (soluble quinop 96.5 0.23 7.9E-06 49.2 20.2 109 266-376 27-162 (454)
397 1tl2_A L10, protein (tachylect 96.5 0.015 5.3E-07 50.7 10.0 182 277-471 4-208 (236)
398 2d8s_A Cellular modulator of i 96.5 0.0029 9.8E-08 45.8 4.6 47 2-49 17-72 (80)
399 2woz_A Kelch repeat and BTB do 96.5 0.31 1.1E-05 45.5 19.9 188 232-431 54-289 (318)
400 2xzh_A Clathrin heavy chain 1; 96.4 0.61 2.1E-05 43.4 25.2 201 224-431 107-334 (365)
401 3das_A Putative oxidoreductase 96.4 0.7 2.4E-05 43.7 30.0 229 264-502 30-321 (347)
402 1tl2_A L10, protein (tachylect 96.3 0.11 3.7E-06 45.4 14.1 144 225-381 42-203 (236)
403 3s25_A Hypothetical 7-bladed b 96.3 0.68 2.3E-05 42.9 24.7 176 229-429 58-255 (302)
404 1xi4_A Clathrin heavy chain; a 96.2 0.22 7.4E-06 55.5 18.8 198 229-438 71-298 (1630)
405 1cru_A Protein (soluble quinop 96.2 0.72 2.4E-05 45.6 21.2 109 311-419 27-163 (454)
406 3i2d_A E3 SUMO-protein ligase 96.1 0.0065 2.2E-07 57.0 5.5 52 1-52 250-305 (371)
407 2yho_A E3 ubiquitin-protein li 95.9 0.0033 1.1E-07 45.5 2.4 41 2-47 20-61 (79)
408 2ct0_A Non-SMC element 1 homol 95.9 0.013 4.4E-07 41.4 5.0 45 2-46 17-63 (74)
409 2be1_A Serine/threonine-protei 95.8 0.029 9.8E-07 53.0 8.9 196 235-434 10-236 (339)
410 3s25_A Hypothetical 7-bladed b 95.7 1.3 4.4E-05 41.0 23.5 205 233-471 23-253 (302)
411 3sbq_A Nitrous-oxide reductase 95.7 2 6.9E-05 42.9 23.0 235 221-461 128-453 (638)
412 2kkx_A Uncharacterized protein 95.6 0.016 5.6E-07 42.4 4.7 53 1-53 28-85 (102)
413 4fo9_A E3 SUMO-protein ligase 95.6 0.015 5E-07 54.5 5.7 51 1-51 216-270 (360)
414 2ea5_A Cell growth regulator w 95.5 0.011 3.7E-07 41.3 3.6 41 2-47 17-58 (68)
415 3q6k_A 43.2 kDa salivary prote 95.3 2.2 7.4E-05 40.8 19.8 192 224-418 87-342 (381)
416 2wg3_C Hedgehog-interacting pr 95.2 2.7 9.3E-05 41.5 29.9 237 226-470 16-370 (463)
417 3sbq_A Nitrous-oxide reductase 95.0 3.4 0.00011 41.4 24.1 240 237-485 72-428 (638)
418 2zwa_A Leucine carboxyl methyl 94.8 0.4 1.4E-05 50.3 14.7 154 234-390 451-637 (695)
419 3b7f_A Glycosyl hydrolase, BNR 94.7 3.2 0.00011 39.8 26.0 263 224-497 55-391 (394)
420 1xi4_A Clathrin heavy chain; a 94.3 1.5 5E-05 49.1 17.4 177 225-408 107-309 (1630)
421 4hvt_A Ritya.17583.B, post-pro 94.2 6.2 0.00021 41.3 25.1 231 228-470 133-427 (711)
422 2be1_A Serine/threonine-protei 93.9 0.13 4.5E-06 48.5 7.5 116 278-397 11-139 (339)
423 3vk6_A E3 ubiquitin-protein li 91.9 0.21 7.3E-06 36.9 4.5 44 2-46 3-48 (101)
424 3b7f_A Glycosyl hydrolase, BNR 91.3 10 0.00035 36.2 26.3 240 236-480 23-329 (394)
425 1vyx_A ORF K3, K3RING; zinc-bi 89.4 0.32 1.1E-05 32.7 3.3 44 2-46 8-58 (60)
426 2wg3_C Hedgehog-interacting pr 89.1 12 0.0004 36.9 15.9 110 266-378 14-159 (463)
427 3hnw_A Uncharacterized protein 88.8 1.1 3.9E-05 35.7 6.7 64 74-137 71-134 (138)
428 2lw1_A ABC transporter ATP-bin 87.4 1.5 5.2E-05 32.0 6.3 57 75-133 19-76 (89)
429 3cve_A Homer protein homolog 1 87.0 1.4 4.9E-05 30.4 5.3 56 82-137 11-66 (72)
430 3cvf_A Homer-3, homer protein 86.2 1.6 5.4E-05 30.8 5.3 56 82-137 17-72 (79)
431 1sqj_A OXG-RCBH, oligoxylogluc 85.9 38 0.0013 35.8 25.8 253 224-480 15-340 (789)
432 4gq2_M Nucleoporin NUP120; bet 84.7 22 0.00074 38.7 16.3 38 312-349 237-274 (950)
433 3ra3_A P1C; coiled coil domain 83.9 0.96 3.3E-05 23.3 2.4 24 79-102 1-24 (28)
434 3qhy_B Beta-lactamase inhibito 83.4 21 0.00071 32.3 13.4 183 225-430 64-247 (282)
435 1l8d_A DNA double-strand break 83.4 0.68 2.3E-05 35.6 2.8 13 35-47 47-59 (112)
436 3lay_A Zinc resistance-associa 78.1 7.8 0.00027 32.2 7.6 50 86-135 86-135 (175)
437 4h22_A Leucine-rich repeat fli 77.9 8 0.00027 28.6 6.6 64 74-137 19-82 (103)
438 3qhy_B Beta-lactamase inhibito 77.6 40 0.0014 30.4 18.0 182 225-429 25-207 (282)
439 3he5_A Synzip1; heterodimeric 77.4 7.9 0.00027 22.7 5.2 45 71-129 3-47 (49)
440 1go4_E MAD1 (mitotic arrest de 77.3 5.4 0.00019 29.5 5.6 38 72-109 13-50 (100)
441 2w6b_A RHO guanine nucleotide 75.6 8.7 0.0003 24.5 5.3 43 82-135 7-49 (56)
442 3sja_C Golgi to ER traffic pro 72.9 9.1 0.00031 25.7 5.3 52 84-137 5-56 (65)
443 2xv5_A Lamin-A/C; structural p 70.2 7.3 0.00025 27.1 4.6 57 75-131 2-58 (74)
444 4b6x_A AVRRPS4, avirulence pro 69.3 14 0.0005 25.5 5.7 55 74-137 25-79 (90)
445 2lf0_A Uncharacterized protein 68.7 9.6 0.00033 28.8 5.2 48 86-135 11-58 (123)
446 3no0_A DNA gyrase subunit A; D 65.7 76 0.0026 28.5 23.2 199 222-428 22-245 (276)
447 2yy0_A C-MYC-binding protein; 65.0 8.3 0.00028 24.9 3.8 25 78-102 19-43 (53)
448 1fmh_A General control protein 64.8 12 0.00042 20.0 3.7 25 76-100 6-30 (33)
449 1t6f_A Geminin; coiled-coil, c 63.9 11 0.00037 21.6 3.6 28 85-126 7-34 (37)
450 4gq2_M Nucleoporin NUP120; bet 63.2 1.7E+02 0.0058 31.6 20.0 39 358-396 236-274 (950)
451 2k5c_A Uncharacterized protein 63.1 0.75 2.5E-05 32.1 -1.5 18 36-53 9-26 (95)
452 3sjb_C Golgi to ER traffic pro 62.8 15 0.00052 26.6 5.1 54 82-137 20-73 (93)
453 4a9v_A PHOX; hydrolase, beta-p 62.7 30 0.001 34.8 9.2 62 400-462 476-550 (592)
454 1ic2_A Tropomyosin alpha chain 61.5 31 0.0011 24.4 6.7 67 71-137 6-72 (81)
455 4fhn_B Nucleoporin NUP120; pro 61.4 26 0.00088 39.0 9.5 38 359-396 239-276 (1139)
456 3ljm_A Coil Ser L9C; de novo d 61.2 11 0.00038 19.9 3.0 25 78-102 1-25 (31)
457 1sqj_A OXG-RCBH, oligoxylogluc 60.5 1.7E+02 0.0058 30.8 22.6 214 265-482 14-278 (789)
458 2cn3_A Xyloglucanase, beta-1,4 60.4 1.6E+02 0.0056 30.6 24.7 214 267-482 24-292 (737)
459 3a7p_A Autophagy protein 16; c 60.4 16 0.00055 29.2 5.4 37 92-128 96-132 (152)
460 3zwu_A Alkaline phosphatase PH 60.0 28 0.00097 35.3 8.7 59 359-417 477-548 (592)
461 3vlc_E Golgi to ER traffic pro 59.8 9.1 0.00031 27.8 3.6 51 85-137 30-80 (94)
462 4hvt_A Ritya.17583.B, post-pro 59.4 1.7E+02 0.0058 30.4 18.1 189 269-469 132-379 (711)
463 2wuj_A Septum site-determining 59.3 6.3 0.00022 25.9 2.5 33 69-101 25-57 (57)
464 3hnw_A Uncharacterized protein 59.2 24 0.0008 28.0 6.3 60 78-137 68-127 (138)
465 2eqb_B RAB guanine nucleotide 59.1 24 0.00083 25.8 5.7 17 120-136 47-63 (97)
466 3q6k_A 43.2 kDa salivary prote 57.6 1.3E+02 0.0044 28.5 24.9 150 310-460 151-341 (381)
467 3uc1_A DNA gyrase subunit A; D 56.2 1.2E+02 0.0043 27.8 24.9 199 225-428 43-278 (327)
468 3zwu_A Alkaline phosphatase PH 56.1 36 0.0012 34.5 8.7 59 401-460 477-548 (592)
469 1wp5_A Topoisomerase IV; broke 55.5 1.3E+02 0.0043 27.7 20.2 189 275-469 3-223 (323)
470 2b5u_A Colicin E3; high resolu 54.8 16 0.00055 35.2 5.3 28 76-104 306-333 (551)
471 1zi0_A DNA gyrase subunit A; b 54.7 1.3E+02 0.0043 27.5 27.4 189 233-428 1-225 (307)
472 4a9v_A PHOX; hydrolase, beta-p 54.7 55 0.0019 32.9 9.4 61 358-418 476-549 (592)
473 3l6v_A GYRA, DNA gyrase subuni 54.3 1.4E+02 0.0049 28.0 27.0 151 231-387 3-179 (370)
474 2qdq_A Talin-1; dimerisation d 53.0 13 0.00045 23.3 3.0 25 111-135 13-37 (50)
475 1deb_A APC protein, adenomatou 51.9 41 0.0014 21.0 5.1 21 82-102 14-34 (54)
476 3t97_C Nuclear pore glycoprote 51.6 9.7 0.00033 25.6 2.4 12 78-89 1-12 (64)
477 3uc1_A DNA gyrase subunit A; D 51.4 1.5E+02 0.0051 27.3 24.3 189 235-428 3-227 (327)
478 1wt6_A Myotonin-protein kinase 51.3 60 0.0021 22.7 6.4 38 65-102 8-48 (81)
479 4fhn_B Nucleoporin NUP120; pro 50.6 36 0.0012 37.8 8.3 38 312-349 239-276 (1139)
480 3na7_A HP0958; flagellar bioge 50.1 27 0.00094 31.0 6.0 58 78-135 90-147 (256)
481 2dgc_A Protein (GCN4); basic d 50.0 13 0.00045 24.9 2.9 30 73-102 32-61 (63)
482 3f7f_A Nucleoporin NUP120; nuc 49.0 71 0.0024 33.1 9.5 37 312-350 223-259 (729)
483 2wt7_B Transcription factor MA 46.6 30 0.001 25.1 4.5 38 81-132 51-88 (90)
484 2lq4_p Lysophosphatidic acid r 46.2 5.7 0.00019 25.9 0.6 23 75-102 8-30 (80)
485 1suu_A DNA gyrase subunit A; t 45.5 1.8E+02 0.0061 26.5 28.5 189 233-428 6-230 (312)
486 2cn3_A Xyloglucanase, beta-1,4 44.2 2.9E+02 0.01 28.6 27.5 252 225-479 24-343 (737)
487 2wt7_A Proto-oncogene protein 43.9 31 0.0011 23.0 4.1 30 73-102 25-54 (63)
488 1gk6_A Vimentin; intermediate 43.1 42 0.0014 22.1 4.5 43 88-130 10-52 (59)
489 1gd2_E Transcription factor PA 42.8 24 0.00082 24.2 3.4 29 74-102 39-67 (70)
490 1x79_B RAB GTPase binding effe 42.2 78 0.0027 23.9 6.3 24 77-100 5-28 (112)
491 3q0x_A Centriole protein; cent 41.8 23 0.00078 30.7 3.9 31 72-102 165-195 (228)
492 1m3v_A FLIN4, fusion of the LI 41.7 17 0.00059 28.0 3.0 52 1-53 33-87 (122)
493 3vp9_A General transcriptional 41.7 18 0.00062 26.2 2.7 66 65-136 8-84 (92)
494 3etw_A Adhesin A; antiparallel 41.4 53 0.0018 25.1 5.4 60 65-134 3-62 (119)
495 3k1l_B Fancl; UBC, ring, RWD, 41.0 7.6 0.00026 36.0 0.8 35 2-36 310-351 (381)
496 2jun_A Midline-1; B-BOX, TRIM, 40.9 20 0.0007 26.4 3.2 31 1-31 4-36 (101)
497 1c1g_A Tropomyosin; contractIl 40.5 56 0.0019 28.7 6.7 28 75-102 10-37 (284)
498 1use_A VAsp, vasodilator-stimu 39.8 38 0.0013 20.7 3.5 27 79-105 8-35 (45)
499 1gu4_A CAAT/enhancer binding p 39.3 32 0.0011 24.1 3.7 26 77-102 42-67 (78)
500 1dh3_A Transcription factor CR 39.3 18 0.00062 23.5 2.2 25 76-100 27-51 (55)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-46 Score=366.50 Aligned_cols=272 Identities=21% Similarity=0.323 Sum_probs=248.7
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|++++|+|++++|++|+.||.|++||..+++.+..+..|...|.+++|+|++++|++|+.|+.|++|++.+..
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred -CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 299 -NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 299 -~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.......+.+|.+.|.++.|++++. +++++.|+.|++||+++++....+. +|...|.+++|+|++.+|++|+.
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT-----GHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEET
T ss_pred CcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc-----CCCCceEEEEECCCCCEEEEEeC
Confidence 2345567789999999999998765 8999999999999999999887775 67789999999999999999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCE
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~ 456 (504)
||.|++||++++..+..+.+|...|++++|+|+|.+|++|+.|+ |++||+++++.+..+........|.+++|+|+|++
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE
Confidence 99999999999999999999999999999999999999999998 99999999888777765444567999999999999
Q ss_pred EEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 457 LAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 457 l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
|++|+.| |++||+ ..+..+..+.+| .+.|++++|+|+|+.
T Consensus 285 l~~g~~d~~i~vwd~----~~~~~~~~~~~h--~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 285 LLAGYDDFNCNVWDA----LKADRAGVLAGH--DNRVSCLGVTDDGMA 326 (340)
T ss_dssp EEEEETTSEEEEEET----TTCCEEEEEECC--SSCEEEEEECTTSSC
T ss_pred EEEECCCCeEEEEEc----ccCcEeeEeecC--CCcEEEEEEcCCCCE
Confidence 9999998 999998 667888999999 889999999999964
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-46 Score=373.53 Aligned_cols=268 Identities=22% Similarity=0.408 Sum_probs=252.0
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|..+|++++|+|++++|++|+.||.|++||+.+++....+.+|.+.|++++|+|++++|++|+.||+|++||+.+.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~- 182 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF- 182 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS-
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
.++..+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+. +|...|.++.|+|+|.+|++|+.|
T Consensus 183 --~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 183 --ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp --CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEEEECTTSSEEEEEETT
T ss_pred --ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-----CCCccEEEEEECCCCCEEEEEcCC
Confidence 6788889999999999999999999999999999999999999888876 677899999999999999999999
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCC--------------------CcEEEEEeCCc-EEEEEcCCCcceeeee
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSEN--------------------GYYLATAAHDG-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~--------------------g~~l~s~~~d~-v~vwd~~~~~~~~~~~ 437 (504)
|.|++||+++++....+.+|...|.+++|+|+ |.+|++|+.|+ |++||++++.++..+.
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 99999999999999999999999999999996 67899999998 9999999999988887
Q ss_pred cCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 438 SSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 438 ~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.| ...|.+++|+|+|.+|++|+.| |++||+ ..++++..+.+| .+.|++++|+|+|+.
T Consensus 336 ~h--~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~----~~~~~~~~~~~h--~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 336 GH--DNWVRGVLFHSGGKFILSCADDKTLRVWDY----KNKRCMKTLNAH--EHFVTSLDFHKTAPY 394 (410)
T ss_dssp CC--SSCEEEEEECSSSSCEEEEETTTEEEEECC----TTSCCCEEEECC--SSCEEEEEECSSSSC
T ss_pred CC--CCcEEEEEEcCCCCEEEEEeCCCeEEEEEC----CCCceEEEEcCC--CCcEEEEEEcCCCCE
Confidence 76 6789999999999999999999 999998 677889999999 889999999999864
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.2e-42 Score=330.91 Aligned_cols=268 Identities=18% Similarity=0.287 Sum_probs=244.1
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|.+.|.+++|+|++++|++|+.||.|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++||+.++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEE-EEeecCCCCCCCCCeEEEEECC-CCCEEEEE
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL-TQVSDAGTDGRPEGYTSAAFHP-DGLILGTG 375 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g 375 (504)
..+..+.+|.+.|.+++|+|++++|++|+.||+|++||++++... ..+. +|...|.+++|+| ++.+|++|
T Consensus 88 ---~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 88 ---EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-----GHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp ---CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC-----CCCSCEEEEEECTTCTTEEEEE
T ss_pred ---cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc-----ccCCcEEEEEECCCCCCEEEEE
Confidence 677888999999999999999999999999999999999987444 3333 6788999999999 78999999
Q ss_pred eCCCcEEEEEcCCCceeeeee-CCCCCeEEEEEcC--CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEEC
Q 010669 376 TSEALVKIWDVKSQANVAKFD-GHVGAVTAISFSE--NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD 451 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~-~~~~~i~~l~~s~--~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~ 451 (504)
+.||.|++||++.+.....+. +|...+..+.|+| ++.+|++|+.|+ |++||+++++++..+..| ...|.+++|+
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h--~~~v~~~~~~ 237 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFH 237 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC--SSCEEEEEEC
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC--CCCEEEEEEC
Confidence 999999999998887766654 4667899999987 778999999999 999999999999888876 6789999999
Q ss_pred CCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 452 HSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 452 ~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
|++.+|++|+.| |++||+ .+++++.++..| ...+.+++++|+|.
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~----~~~~~~~~~~~~--~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNS----STYKVEKTLNVG--LERSWCIATHPTGR 283 (304)
T ss_dssp SSSSEEEEEETTSCEEEEET----TTCCEEEEECCS--SSSEEEEEECTTCG
T ss_pred CCCCEEEEEcCCCeEEEEEC----CCCceeeeccCC--CccEEEEEECCCCC
Confidence 999999999999 999998 778999999988 78999999999885
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.8e-42 Score=330.06 Aligned_cols=268 Identities=19% Similarity=0.323 Sum_probs=244.4
Q ss_pred ccCCCCCeEEEEeccC----CCEEEEEeCCCcEEEEcCCCCce--EEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEE
Q 010669 219 HKTSKPGIVSLDIHYS----KDVIATGGVDTNAVLFDRPSGQI--VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~----~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iw 292 (504)
..+|.+.|++++|+|+ +.+|++|+.||+|+||++.+++. ...+.+|...|.+++|++++.++++++.|++|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4679999999999985 56999999999999999877653 45688999999999999999999999999999999
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
|+.++ ..+..+..|...+.+++|+|++++|++++.||.|++||+++++....+. .+...+.+++|+|+|++|
T Consensus 108 d~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-----~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 108 DLENG---KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-----TRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp ETTTT---EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-----CSSSCEEEEEECTTSSEE
T ss_pred ECCCC---CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-----CCCceEEEEEECCCCCEE
Confidence 99886 6777788888999999999999999999999999999999998887775 455689999999999999
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEEC
Q 010669 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD 451 (504)
Q Consensus 373 ~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~ 451 (504)
++|+.||.|++||+++++.+..+.+|..+|++++|+|++.+|++++.|+ |++||++++.....+..+ ...|.+++|+
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~s 257 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH--ASWVLNVAFC 257 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCC--SSCEEEEEEC
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCC--CCceEEEEEC
Confidence 9999999999999999999999999999999999999999999999998 999999999888877765 6789999999
Q ss_pred CCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 452 HSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 452 ~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
|++.+|++++.| |+|||+ .+++++.++.+| .+.|.+++|+++|+.
T Consensus 258 p~~~~l~s~s~D~~v~iwd~----~~~~~~~~~~~h--~~~v~~v~~s~~g~~ 304 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDV----GTRTCVHTFFDH--QDQVWGVKYNGNGSK 304 (321)
T ss_dssp TTSSEEEEEETTSCEEEEET----TTTEEEEEECCC--SSCEEEEEECTTSSE
T ss_pred CCCCEEEEEeCCCcEEEEeC----CCCEEEEEEcCC--CCcEEEEEECCCCCE
Confidence 999999999999 999998 778999999998 889999999999863
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-41 Score=329.87 Aligned_cols=274 Identities=21% Similarity=0.281 Sum_probs=249.1
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|++...
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFD 138 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred C---CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC--CCCEE
Q 010669 298 G---NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP--DGLIL 372 (504)
Q Consensus 298 ~---~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--dg~~l 372 (504)
. .......+.+|...|.++.|+|++..|++++.||+|++||+++++.+..+. +|...|.+++|+| +|++|
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-----GHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEEEECCCSSCCEE
T ss_pred ccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-----CCCCCeEEEEEEeCCCCCEE
Confidence 1 123456677899999999999999999999999999999999999888876 6778899999988 57899
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEEC
Q 010669 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD 451 (504)
Q Consensus 373 ~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~ 451 (504)
++|+.||.|++||+++++++..+.+|...|++++|+|++.+|++++.|+ |++||++..+.+..+..+.....+.+++|+
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 9999999999999999999999999999999999999999999999998 999999998877766654445678999999
Q ss_pred CCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 452 HSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 452 ~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
|+|.+|++|+.| |++||+ .++..+..+.+| .+.|++++|+|+|+.
T Consensus 294 ~~g~~l~~g~~d~~i~vwd~----~~~~~~~~l~~h--~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 294 LSGRLLFAGYNDYTINVWDV----LKGSRVSILFGH--ENRVSTLRVSPDGTA 340 (354)
T ss_dssp TTSSEEEEEETTSCEEEEET----TTCSEEEEECCC--SSCEEEEEECTTSSC
T ss_pred CCCCEEEEEECCCcEEEEEC----CCCceEEEEECC--CCcEEEEEECCCCCE
Confidence 999999999988 999998 667888899999 889999999999964
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.7e-41 Score=331.74 Aligned_cols=279 Identities=19% Similarity=0.323 Sum_probs=244.9
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++++|++|+.|+.|++||+...
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred ----CCcceeEEeccCCcCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC-CCCE
Q 010669 298 ----GNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP-DGLI 371 (504)
Q Consensus 298 ----~~~~~~~~~~~h~~~v~~l~~~p~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-dg~~ 371 (504)
+.......+.+|.+.|.++.|+|++ ..|++|+.|++|++||+++++.+..+......+|...+.+++|++ ++.+
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence 1223455678999999999999974 579999999999999999999887774333357888999999987 8999
Q ss_pred EEEEeCCCcEEEEEcC-CCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCC-----CCC
Q 010669 372 LGTGTSEALVKIWDVK-SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-----ETP 444 (504)
Q Consensus 372 l~~g~~dg~I~iwd~~-~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~-----~~~ 444 (504)
|++|+.||.|++||++ .++.+..+.+|.+.|++++|+|+|.+|++|+.|+ |++||+++++.+..+..+.. ...
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPI 300 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCS
T ss_pred EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCc
Confidence 9999999999999998 4577888999999999999999999999999998 99999999988877755321 234
Q ss_pred eeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEc----cCCCCCCceeEEEEeecCcc
Q 010669 445 TNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTF----PDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 445 v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~----~~h~~~~~v~~l~~~~~g~~ 502 (504)
+.+++|+|+|.+|++|+.| |++||+ ...+.+..+ .+| .+.|++++|+|+|+.
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~----~~~~~~~~~~~~~~~h--~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDT----LLAEMVLNLGTLQNSH--EGRISCLGLSSDGSA 358 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEET----TTCCEEEEECCSCSSC--CCCCCEEEECSSSSE
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEEC----CCCceEEEEecccCCC--CCceEEEEECCCCCE
Confidence 8999999999999999988 999998 556666665 567 889999999999964
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-39 Score=312.65 Aligned_cols=270 Identities=21% Similarity=0.407 Sum_probs=242.8
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|++++|+|++++|++|+.||.|++|+..+++....+.+|...|.+++|+|++++|++|+.||.|++||+.++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~- 97 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG- 97 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC-
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
.++..+.+|...|.++.|+|++++|++|+.||.|++||+++++....+. .|...|.+++|+|++.+|++|+.|
T Consensus 98 --~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 98 --KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-----AHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp --CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT
T ss_pred --cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcEEEEEEcCCCCEEEEEeCC
Confidence 6778888999999999999999999999999999999999998887775 567789999999999999999999
Q ss_pred CcEEEEEcCCCceeeeee-CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEE-CCCCC
Q 010669 379 ALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDF-DHSGS 455 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~-~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~-~~~g~ 455 (504)
|.|++||+++++.+..+. .+...+..++|+|++.+|++++.|+ |++||+++++.+..+..+..........| .+++.
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 999999999998877764 4567899999999999999999998 99999999998888876643322233334 46789
Q ss_pred EEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 456 YLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 456 ~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|++|+.| |++|++ .+.+.+..+.+| .+.|.+++|.|+++.
T Consensus 251 ~l~sg~~dg~i~vwd~----~~~~~~~~~~~h--~~~v~~~~~~p~~~~ 293 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNL----QTKEIVQKLQGH--TDVVISTACHPTENI 293 (312)
T ss_dssp EEEECCTTSCEEEEET----TTCCEEEEECCC--SSCEEEEEECSSSSE
T ss_pred EEEEECCCCEEEEEEC----CCchhhhhhhcc--CCcEEEEeecCcCCc
Confidence 99999988 999998 678889999999 889999999998864
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-39 Score=311.90 Aligned_cols=269 Identities=21% Similarity=0.368 Sum_probs=235.9
Q ss_pred cccCCCCCeEEEEeccCC-CEEEEEeCCCcEEEEcCCC-----CceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEE
Q 010669 218 LHKTSKPGIVSLDIHYSK-DVIATGGVDTNAVLFDRPS-----GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~-~~l~sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~i 291 (504)
...+|.+.|++++|+|++ ++|++|+.||+|++|++.. +..+..+.+|...|.+++|+|++++|++|+.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 356899999999999965 8999999999999999753 3456788999999999999999999999999999999
Q ss_pred EeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC---
Q 010669 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD--- 368 (504)
Q Consensus 292 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd--- 368 (504)
||+.++ .....+.+|...|.+++|+|++.+|++|+.|++|++||++.. .+..+. +|...+.++.|+|.
T Consensus 92 wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~-----~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 92 WDVATG---ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLL-----GHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EETTTT---EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEEC-----CCSSCEEEEEECCC---
T ss_pred EECCCC---CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEe-----ccCCcEEEEEEccCCCC
Confidence 999886 677888999999999999999999999999999999999754 444443 67789999999994
Q ss_pred ---CCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCC
Q 010669 369 ---GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETP 444 (504)
Q Consensus 369 ---g~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~ 444 (504)
+..+++++.|+.|++||+++++....+.+|...|++++|+|+|.+|++++.|+ |++||+++++.+..+..+ ..
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~ 239 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---DE 239 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---SC
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---Cc
Confidence 45899999999999999999999999999999999999999999999999999 999999999988888753 57
Q ss_pred eeEEEECCCCCEEEEEeCc-EEEEEeeccCccceeEEEccCC------CCCCceeEEEEeecCcc
Q 010669 445 TNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFPDL------SGTGAASFLFLFVLGQT 502 (504)
Q Consensus 445 v~~i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~~~h------~~~~~v~~l~~~~~g~~ 502 (504)
+.+++|+|++.+|++++.+ +++|++ .....+..+..+ .+...+.+++|+|+|+.
T Consensus 240 v~~~~~sp~~~~la~~~~~~i~v~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 300 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATATGIKVFSL----DPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQT 300 (319)
T ss_dssp EEEEEECSSSSEEEEEETTEEEEEEE----TTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEe----CcCeeeeccCccccccccCcCcceeEEEECCCCCE
Confidence 9999999999999999988 999998 444455544322 11567899999999975
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=312.97 Aligned_cols=241 Identities=20% Similarity=0.391 Sum_probs=227.5
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|.+++|++++.++++|+.||+|++||+.+++.+..+..|...+.+++|+|++++|++|+.||.|++|++..+
T Consensus 76 l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~- 154 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG- 154 (321)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-
T ss_pred eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
.....+..|...|.+++|+|++++|++|+.||.|++||+++++.+..+. +|...|.+++|+|++.+|++|+.|
T Consensus 155 --~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 155 --KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp --SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTT
T ss_pred --ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCC
Confidence 5667778888999999999999999999999999999999999888775 677899999999999999999999
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEE
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l 457 (504)
|.|++||+++++.+..+.+|...|.+++|+|+|.+|++++.|+ |++||+++++++..+..+ ...|.+++|+|+|.+|
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h--~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH--QDQVWGVKYNGNGSKI 305 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC--CCcEEEEEECCCCCEE
Confidence 9999999999999999999999999999999999999999998 999999999998888765 6789999999999999
Q ss_pred EEEeCc--EEEEEe
Q 010669 458 AVASAD--IRVYQV 469 (504)
Q Consensus 458 ~~~~~d--i~vw~~ 469 (504)
++++.| |+|||+
T Consensus 306 ~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 306 VSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEETTCCEEEEEC
T ss_pred EEEeCCCeEEEEeC
Confidence 999999 999996
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=314.26 Aligned_cols=277 Identities=18% Similarity=0.282 Sum_probs=228.5
Q ss_pred ccCCCC-CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEE---EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeC
Q 010669 219 HKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294 (504)
Q Consensus 219 ~~~~~~-~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~---~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~ 294 (504)
..+|.. .|.+++|+|+|++|++|+.||+|+|||+.++.... ...+|...|.+++|+|++++|++|+.|++|++||.
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEc
Confidence 346766 89999999999999999999999999998775432 33689999999999999999999999999999998
Q ss_pred CCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
..+ ...+...+.+|...|.+++|+|++++|++|+.|+.|++||++++.....+.. ..+|...|.+++|+|++.+|++
T Consensus 91 ~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 91 NQD-DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV--LNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp CCC--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE--ECCCCSCEEEEEECSSSSCEEE
T ss_pred cCC-CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE--ecCcCCCeEEEEECCCCCEEEE
Confidence 763 3356778889999999999999999999999999999999987643222111 1267789999999999999999
Q ss_pred EeCCCcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc---------------ceeee
Q 010669 375 GTSEALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK---------------NFRSF 436 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~---------------~~~~~ 436 (504)
|+.||.|++||++.++ +...+.+|...|++++|+|+|.+|++++.|+ |++||..... ++..+
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTL 247 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEE
T ss_pred EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEe
Confidence 9999999999998775 4567889999999999999999999999998 9999974321 12222
Q ss_pred ecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccce-----eEEEccCCCCCCceeEEEEeecCc
Q 010669 437 ESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWN-----CIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 437 ~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~-----~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.. .+...|.+++|+|++.+|++++.| +++|+......... ....+.+| .+.|++++|+|++.
T Consensus 248 ~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~v~~~p~~~ 316 (345)
T 3fm0_A 248 SG-FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH--SQDVNCVAWNPKEP 316 (345)
T ss_dssp CS-SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS--SSCEEEEEECSSST
T ss_pred cC-CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc--cCcEeEeEEeCCCc
Confidence 22 136789999999999999999998 99999855332221 12334677 88999999999874
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-39 Score=323.81 Aligned_cols=242 Identities=22% Similarity=0.446 Sum_probs=227.5
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||+.++
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 224 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC---------
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD--------- 368 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd--------- 368 (504)
.++..+.+|...|.++.|+|++.+|++|+.||.|++||+.++.....+. +|...|.+++|+|+
T Consensus 225 ---~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 225 ---YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-----EHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp ---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECCSCGGGGGGGC
T ss_pred ---cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-----CCCceEEEEEEcCcccccchhhh
Confidence 6788889999999999999999999999999999999999998887775 67789999999996
Q ss_pred -----------CCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeee
Q 010669 369 -----------GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436 (504)
Q Consensus 369 -----------g~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~ 436 (504)
|.+|++|+.||.|++||++++.++..+.+|...|++++|+|+|.+|++|+.|+ |++||+++++.+..+
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 67899999999999999999999999999999999999999999999999999 999999999998888
Q ss_pred ecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEe
Q 010669 437 ESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 437 ~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~ 469 (504)
..| ...|++++|+|++.+|++|+.| |+||++
T Consensus 377 ~~h--~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 377 NAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ECC--SSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred cCC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 776 6789999999999999999999 999986
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-38 Score=310.66 Aligned_cols=271 Identities=18% Similarity=0.316 Sum_probs=227.1
Q ss_pred cccCCCCCeEEEEe-----cc-CCCEEEEEeCCCcEEEEcCCCC-------ceEEEcccCccceeEEEEeeCCCEEEEEe
Q 010669 218 LHKTSKPGIVSLDI-----HY-SKDVIATGGVDTNAVLFDRPSG-------QIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284 (504)
Q Consensus 218 ~~~~~~~~I~~~~~-----s~-~~~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~s~~~~~l~s~s 284 (504)
...+|...|++++| ++ ++++|++|+.||+|++||+.+. .....+.+|...|.+++|+|++.++++|+
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence 45689999999999 76 8999999999999999998643 45678899999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEE
Q 010669 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA 364 (504)
Q Consensus 285 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 364 (504)
.|++|++||+.++ .....+.+|...|.+++|+|++++|++++.|+.|++||+...... ... ....|...+.+++
T Consensus 96 ~D~~v~lwd~~~~---~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~-~~~--~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 96 WDKTLRLWDLRTG---TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF-SSA--EKENHSDWVSCVR 169 (343)
T ss_dssp TTSEEEEEETTSS---CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE-ECC--TTTSCSSCEEEEE
T ss_pred CCCcEEEEECCCC---cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee-eee--cccCCCceeeeee
Confidence 9999999999886 677888899999999999999999999999999999999854332 221 1236778899999
Q ss_pred ECCCC----------CEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCC-cc
Q 010669 365 FHPDG----------LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL-KN 432 (504)
Q Consensus 365 ~~pdg----------~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~-~~ 432 (504)
|+|++ .+|++++.||.|++|| ...+....+.+|...|++++|+|+|.+|++|+.|+ |++||++.. ..
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 99987 7999999999999999 45667778899999999999999999999999999 999999543 33
Q ss_pred eeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEeeccCccceeEEEcc-----------CCCCCCceeEEEEeecC
Q 010669 433 FRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFP-----------DLSGTGAASFLFLFVLG 500 (504)
Q Consensus 433 ~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~~-----------~h~~~~~v~~l~~~~~g 500 (504)
...+.. ...|.+++|+|++.++++++.+ +++|++..... ..+..+. +| ...|++++|+|+|
T Consensus 249 ~~~~~~---~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~sp~g 321 (343)
T 2xzm_R 249 QREFDA---GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSK--APVCTIEAEPITKAEGQKGK--NPQCTSLAWNALG 321 (343)
T ss_dssp SEEEEC---SSCEEEEEECSSSCEEEEEESSCEEEEESSSCCS--CSEEECCCCSGGGBTTBCCS--CCCEEEEEECSSS
T ss_pred ceeecC---CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCC--CceEEeecCcchhhhhhcCC--CCceEEEEECCCC
Confidence 343432 3569999999999999888766 99999843221 1122333 55 7789999999999
Q ss_pred cc
Q 010669 501 QT 502 (504)
Q Consensus 501 ~~ 502 (504)
+.
T Consensus 322 ~~ 323 (343)
T 2xzm_R 322 KK 323 (343)
T ss_dssp CC
T ss_pred Ce
Confidence 74
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=312.72 Aligned_cols=265 Identities=14% Similarity=0.141 Sum_probs=217.8
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC-----------CceEEEcccCccceeEEEEeeCCCEEEEEeCCCcE
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS-----------GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTV 289 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-----------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i 289 (504)
.|...|.+++|+|||++|++++ |+++++||... .........|...|.+++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4566799999999999999887 66777776210 01111112356779999999985 68899999999
Q ss_pred EEEeCCCCCCcc-eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC
Q 010669 290 RVWQGSEDGNYD-CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD 368 (504)
Q Consensus 290 ~iwd~~~~~~~~-~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd 368 (504)
+|||+.++.... ......+|.+.|.+++|+|++++|++|+.||+|++||+++++.+..+. +|...|.+++|+|+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSS
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-----CcCCceEEEEecCC
Confidence 999998764322 223345899999999999999999999999999999999999988876 78899999999998
Q ss_pred C-CEEEEEeCCCcEEEEEcCCCceeeeee--CCCCCeEEEEEcC-CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCC
Q 010669 369 G-LILGTGTSEALVKIWDVKSQANVAKFD--GHVGAVTAISFSE-NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSET 443 (504)
Q Consensus 369 g-~~l~~g~~dg~I~iwd~~~~~~~~~~~--~~~~~i~~l~~s~-~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~ 443 (504)
+ .+|++|+.||.|++||+++++....+. .|...+++++|+| ++.+|++|+.|+ |++||+++++.+..+..| ..
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h--~~ 258 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH--SQ 258 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC--SS
T ss_pred CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC--CC
Confidence 7 578999999999999999999887764 3556799999999 467899999998 999999999999988876 67
Q ss_pred CeeEEEECCCC-CEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 444 PTNSVDFDHSG-SYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 444 ~v~~i~~~~~g-~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.|++++|+|+| ++|++|+.| |+|||+ ..+++ ..+.+| .+.|++++|+|+|+
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~----~~~~~-~~~~~H--~~~V~~v~~sp~~~ 312 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDS----SLSEL-FRSQAH--RDFVRDATWSPLNH 312 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECT----TCCEE-EEECCC--SSCEEEEEECSSST
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEEC----CCCcE-EEEcCC--CCCEEEEEEeCCCC
Confidence 89999999998 689999998 999998 44554 456788 88999999999986
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=312.54 Aligned_cols=239 Identities=20% Similarity=0.261 Sum_probs=207.2
Q ss_pred CCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEE----cccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTT----LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~----~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
|..+|.+++|+|++ .|++|+.||.|+|||+.+++.+.. +.+|.+.|++++|+|++++|++|+.||+|++||+.++
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 56789999999985 678999999999999998865433 4589999999999999999999999999999999886
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC-CCCEEEEE
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTG 375 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g 375 (504)
.++..+.+|.+.|.+++|+|++. +|++++.||+|++||+++++....+... .+...+.+++|+| ++.+|++|
T Consensus 160 ---~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 160 ---VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS---APGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp ---EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEE
T ss_pred ---cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc---eeeccceeeeecCCCCcceEEe
Confidence 78889999999999999999885 7899999999999999999888776522 4456799999999 56789999
Q ss_pred eCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCC-cEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG-YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g-~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
+.||.|++||+++++++..+.+|...|++++|+|+| .+|++|+.|+ |+|||+++++.+. +.. |...|++++|+|+
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~--H~~~V~~v~~sp~ 310 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQA--HRDFVRDATWSPL 310 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECC--CSSCEEEEEECSS
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcC--CCCCEEEEEEeCC
Confidence 999999999999999999999999999999999997 5899999998 9999999887543 433 4789999999999
Q ss_pred CC-EEEEEeCc--EEEEEee
Q 010669 454 GS-YLAVASAD--IRVYQVA 470 (504)
Q Consensus 454 g~-~l~~~~~d--i~vw~~~ 470 (504)
+. +|++++.| |++|++.
T Consensus 311 ~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 311 NHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp STTEEEEEETTSCEEEEECC
T ss_pred CCeEEEEEcCCCeEEEEECC
Confidence 86 56788888 9999984
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-38 Score=313.89 Aligned_cols=261 Identities=21% Similarity=0.386 Sum_probs=228.5
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCcc------------------ceeEEEEeeCCCEEEE
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK------------------KVTSVKFVTEGDLFLT 282 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~------------------~v~~l~~s~~~~~l~s 282 (504)
.|...|.+++|+|+|++|++|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 5889999999999999999987 68999999999998888765542 4899999999999999
Q ss_pred EeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEE
Q 010669 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362 (504)
Q Consensus 283 ~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 362 (504)
|+.||+|++||+.++ .....+.+|...|.+++|+|++++|++++.|++|++||+++++....+. +...+.+
T Consensus 141 ~~~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~------~~~~v~~ 211 (393)
T 1erj_A 141 GAEDRLIRIWDIENR---KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS------IEDGVTT 211 (393)
T ss_dssp EETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CSSCEEE
T ss_pred EcCCCeEEEEECCCC---cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE------cCCCcEE
Confidence 999999999999875 6778889999999999999999999999999999999999998877764 2357999
Q ss_pred EEECC-CCCEEEEEeCCCcEEEEEcCCCceeeee-------eCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc--
Q 010669 363 AAFHP-DGLILGTGTSEALVKIWDVKSQANVAKF-------DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-- 431 (504)
Q Consensus 363 ~~~~p-dg~~l~~g~~dg~I~iwd~~~~~~~~~~-------~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~-- 431 (504)
++|+| ++.+|++|+.||.|++||++++..+..+ .+|...|.+++|+|+|.+|++|+.|+ |++||+++..
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 99999 9999999999999999999998887766 57889999999999999999999998 9999998643
Q ss_pred ----------ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeec
Q 010669 432 ----------NFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVL 499 (504)
Q Consensus 432 ----------~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~ 499 (504)
+...+..+ ...|.+++|+|++.+|++|+.| |++||+ .+++.+..+.+| .+.|.+++|++.
T Consensus 292 ~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~----~~~~~~~~l~~h--~~~v~~v~~~~~ 363 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIGH--KDFVLSVATTQNDEYILSGSKDRGVLFWDK----KSGNPLLMLQGH--RNSVISVAVANG 363 (393)
T ss_dssp ---------CEEEEEECC--SSCEEEEEECGGGCEEEEEETTSEEEEEET----TTCCEEEEEECC--SSCEEEEEECSS
T ss_pred ccccCCCCCcceEEEecc--cCcEEEEEECCCCCEEEEEeCCCeEEEEEC----CCCeEEEEECCC--CCCEEEEEecCC
Confidence 23344443 6789999999999999999999 999998 678889999999 889999998863
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-38 Score=302.55 Aligned_cols=258 Identities=20% Similarity=0.315 Sum_probs=215.4
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC--CceEEEcccCccceeEEEEee--CCCEEEEEeCCCcEEEEe
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS--GQIVTTLSGHSKKVTSVKFVT--EGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~s~dg~i~iwd 293 (504)
+..+|...|.+++|+|+|++|++|+.||+|+|||+.. .+.+.++.+|.+.|++++|++ ++++|++|+.||+|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 3567999999999999999999999999999999874 467889999999999999986 488999999999999999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeE--EEEeecCCCCCCCCCeEEEEECCC-
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNTWCFYDLSSGIC--LTQVSDAGTDGRPEGYTSAAFHPD- 368 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~pd- 368 (504)
+.++ .......+.+|...|.+++|+|+ +.+|++++.||.|++||++++.. ...+. +|...|.+++|+|+
T Consensus 84 ~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-----~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 84 EENG-RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-----AHAIGVNSASWAPAT 157 (297)
T ss_dssp BSSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-----CCSSCEEEEEECCCC
T ss_pred cCCC-ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-----cccCccceEeecCCc
Confidence 9864 23455667789999999999997 88999999999999999987632 22222 67788999999997
Q ss_pred ------------CCEEEEEeCCCcEEEEEcCCCc----eeeeeeCCCCCeEEEEEcCCC---cEEEEEeCCc-EEEEEcC
Q 010669 369 ------------GLILGTGTSEALVKIWDVKSQA----NVAKFDGHVGAVTAISFSENG---YYLATAAHDG-VKLWDLR 428 (504)
Q Consensus 369 ------------g~~l~~g~~dg~I~iwd~~~~~----~~~~~~~~~~~i~~l~~s~~g---~~l~s~~~d~-v~vwd~~ 428 (504)
+++|++|+.||.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|+ |++||++
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5799999999999999998766 566788999999999999984 8999999998 9999998
Q ss_pred CCcc---eeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEc
Q 010669 429 KLKN---FRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 429 ~~~~---~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~ 482 (504)
+... ...+....+...|.+++|+|+|++|++++.| |+||+.... ..|.++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~-g~w~~~~~~ 295 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE-GKWEPAGEV 295 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT-SCEEEC---
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC-CcEEecccc
Confidence 7532 1222223346789999999999999999998 999998542 457766654
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-37 Score=300.36 Aligned_cols=270 Identities=21% Similarity=0.365 Sum_probs=215.6
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC--ceEEEc-cc-CccceeEEEEeeCCCEEEEEeCCCcEEEEeC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG--QIVTTL-SG-HSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~--~~~~~~-~~-h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~ 294 (504)
..+|..+|.+++|+++ +|++|+.||.|++||+..+ .....+ .+ |...|.+++|+|++++|++|+.|++|++||+
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 5679999999999987 9999999999999999875 445555 44 9999999999999999999999999999998
Q ss_pred CCCC----CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCC----eEEEEeecCCCCCCCCCeEEEEEC
Q 010669 295 SEDG----NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG----ICLTQVSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 295 ~~~~----~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~v~~~~~~ 366 (504)
.... .......+.+|...|.+++|+|++++|++|+.|++|++||++.. +.+..+. +|...|.+++|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-----~h~~~v~~v~~~ 162 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-----EHSQDVKHVIWH 162 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-----CCSSCEEEEEEC
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-----cCCCceEEEEEC
Confidence 5421 22466778899999999999999999999999999999999532 3444443 678899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCC--ceeeeeeCCCCCeEEEEEcCC--CcEEEEEeCCc-EEEEEcCCCc--------ce
Q 010669 367 PDGLILGTGTSEALVKIWDVKSQ--ANVAKFDGHVGAVTAISFSEN--GYYLATAAHDG-VKLWDLRKLK--------NF 433 (504)
Q Consensus 367 pdg~~l~~g~~dg~I~iwd~~~~--~~~~~~~~~~~~i~~l~~s~~--g~~l~s~~~d~-v~vwd~~~~~--------~~ 433 (504)
|++.+|++|+.||.|++||.+.+ +++..+.+|.+.|.+++|+|+ +.+|++++.|+ |++||++.+. ..
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 99999999999999999999776 678889999999999999998 77999999998 9999997642 22
Q ss_pred eeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEE-ccCCCCCC-ceeEEEEee--cCc
Q 010669 434 RSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKT-FPDLSGTG-AASFLFLFV--LGQ 501 (504)
Q Consensus 434 ~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~-~~~h~~~~-~v~~l~~~~--~g~ 501 (504)
..+.. .+...|.+++|++++ +|++++.| |+||+... ..++.+.. +.+| .. .|.+++|+| +|+
T Consensus 243 ~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~--~~~~~~~~~~~~h--~~~~v~~v~~~~~~~~~ 310 (330)
T 2hes_X 243 AILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD--GEWKVFAKRALCH--GVYEINVVKWLELNGKT 310 (330)
T ss_dssp EECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET--TEEEEEEEESCTT--TTSCEEEEEEC-----C
T ss_pred eeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC--CceEEEecccccc--ccceEEEEEEecCCCce
Confidence 22322 246789999999765 78888888 99999843 23444443 4566 55 899999998 454
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.8e-38 Score=308.77 Aligned_cols=266 Identities=15% Similarity=0.194 Sum_probs=219.9
Q ss_pred CCCCCeEEEEeccCCCEEEEEeC------CCcEEEEcCCCCceE----EEcccCccceeEEEEeeCCCEEEEEeCCCcEE
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGV------DTNAVLFDRPSGQIV----TTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~------dg~i~vwd~~~~~~~----~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~ 290 (504)
.|...|.+++|+|||++|++|+. ||.|++|+..++... ....+|...|++++|+|++. +++++.||+|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEE
Confidence 57889999999999999999997 788999998776543 23346888999999999875 56788999999
Q ss_pred EEeCCCCCCc-ceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC
Q 010669 291 VWQGSEDGNY-DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG 369 (504)
Q Consensus 291 iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg 369 (504)
|||+.++... .......+|.+.|.+++|+|++++|++|+.||.|++||+++++.+..+. +|...|++++|+|++
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGK 193 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTC
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCC
Confidence 9999875321 1223445899999999999999999999999999999999999888875 678899999999987
Q ss_pred C-EEEEEeCCCcEEEEEcCCCceeeeee--CCCCCeEEEEEcCC-CcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCC
Q 010669 370 L-ILGTGTSEALVKIWDVKSQANVAKFD--GHVGAVTAISFSEN-GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETP 444 (504)
Q Consensus 370 ~-~l~~g~~dg~I~iwd~~~~~~~~~~~--~~~~~i~~l~~s~~-g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~ 444 (504)
. ++++++.||.|++||+++++++..+. .|...+++++|+|+ +.+|++|+.|+ |++||+++++.+..+..+ ...
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~--~~~ 271 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH--SQN 271 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC--SSC
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc--cee
Confidence 4 78999999999999999988776553 46778999999997 57899999998 999999999998888766 678
Q ss_pred eeEEEECCCC-CEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEee-cCc
Q 010669 445 TNSVDFDHSG-SYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFV-LGQ 501 (504)
Q Consensus 445 v~~i~~~~~g-~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~-~g~ 501 (504)
|++++|+|++ ++|++|+.| |+|||+ ..++++..+ +| .+.|++++|+| +|+
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~----~~~~~~~~~-~H--~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDA----DFSEVFRDL-SH--RDFVTGVAWSPLDHS 325 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECT----TSCEEEEEC-CC--SSCEEEEEECSSSTT
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEEC----CCCcEeEEC-CC--CCCEEEEEEeCCCCC
Confidence 9999999987 689999988 999998 566777665 77 88999999998 564
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.1e-37 Score=299.47 Aligned_cols=243 Identities=22% Similarity=0.365 Sum_probs=219.4
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.||+|++||+..
T Consensus 61 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-- 138 (319)
T 3frx_A 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-- 138 (319)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--
T ss_pred EeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--
Confidence 567999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CcceeEEeccCCcCeEEEEEccC------CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHAT------NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
.+...+.+|...|.++.|+|. +..+++++.|+.|++||+++++....+. +|...|.+++|+|+|.+|
T Consensus 139 --~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-----~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 139 --QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-----GHNSNINTLTASPDGTLI 211 (319)
T ss_dssp --CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-----CCCSCEEEEEECTTSSEE
T ss_pred --CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-----CCCCcEEEEEEcCCCCEE
Confidence 577788899999999999985 4489999999999999999998877765 678899999999999999
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecC------CCCCCee
Q 010669 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESS------DSETPTN 446 (504)
Q Consensus 373 ~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~------~~~~~v~ 446 (504)
++|+.||.|++||+++++.+..+..+ ..|.+++|+|++.+|++++.+++++|++.....+..+... .+...+.
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 290 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAV 290 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCccee
Confidence 99999999999999999999888754 6899999999999999999888999999887666555422 1245688
Q ss_pred EEEECCCCCEEEEEeCc--EEEEEeec
Q 010669 447 SVDFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 447 ~i~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
+++|+|+|++|++|+.| |+||++.+
T Consensus 291 ~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 291 SLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEECCCCCEEEEeecCceEEEEEEee
Confidence 99999999999999999 99999843
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.4e-38 Score=329.24 Aligned_cols=270 Identities=16% Similarity=0.228 Sum_probs=234.4
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC--ceEEEcccCccceeEEEEeeCCCEEEEEeCC----CcEEE
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG--QIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD----KTVRV 291 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d----g~i~i 291 (504)
...+|...|++++|+|+|++|++|+.||+|+|||+.++ .....+.+|.+.|.+++|+|++++|++++.+ +.|++
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 45689999999999999999999999999999998754 3456788999999999999999999998865 47888
Q ss_pred EeCCCCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 292 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
||.. .....+.+|...|.+++|+|++. .|++|+.|++|++||..+++....+. +|...|.+++|+|+|+
T Consensus 134 wd~~-----~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-----~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 134 FDTG-----TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-----EHTKFVHSVRYNPDGS 203 (611)
T ss_dssp TTTC-----CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-----CCSSCEEEEEECTTSS
T ss_pred eeCC-----CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-----cccCceEEEEECCCCC
Confidence 8743 34566789999999999999987 69999999999999999988877765 7888999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeee-------CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeec----
Q 010669 371 ILGTGTSEALVKIWDVKSQANVAKFD-------GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES---- 438 (504)
Q Consensus 371 ~l~~g~~dg~I~iwd~~~~~~~~~~~-------~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~---- 438 (504)
+|++|+.||.|++||+.+++.+..+. +|.+.|.+++|+|+|.+|++++.|+ |++||+++++.+..+..
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 99999999999999999999888874 7999999999999999999999998 99999998776544321
Q ss_pred -------------------------------------CCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeE
Q 010669 439 -------------------------------------SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCI 479 (504)
Q Consensus 439 -------------------------------------~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i 479 (504)
..|...|.+++|+|+|++|++++.| |++||+ .++...
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~----~~~~~~ 359 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI----STGISN 359 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET----TTCCEE
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC----CCCcee
Confidence 2346789999999999999999999 999998 556666
Q ss_pred EEc-cCCCCCCceeEEEEeecCccc
Q 010669 480 KTF-PDLSGTGAASFLFLFVLGQTC 503 (504)
Q Consensus 480 ~~~-~~h~~~~~v~~l~~~~~g~~~ 503 (504)
..+ .+| ...|.+++|++++.++
T Consensus 360 ~~~~~~h--~~~v~~~~~s~~~~l~ 382 (611)
T 1nr0_A 360 RVFPDVH--ATMITGIKTTSKGDLF 382 (611)
T ss_dssp ECSSCSC--SSCEEEEEECTTSCEE
T ss_pred eecccCC--cceEEEEEECCCCcEE
Confidence 655 456 7899999999887654
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.2e-37 Score=297.18 Aligned_cols=243 Identities=20% Similarity=0.346 Sum_probs=220.4
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
...|..+|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++|+.||+|++||+.++.
T Consensus 51 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT
T ss_pred eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999998642
Q ss_pred CcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC--CCCEEEEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP--DGLILGTG 375 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--dg~~l~~g 375 (504)
.....+.+|...|.+++|+| ++.+|++|+.||+|++||++++.....+.. ++...+..+.|+| ++.+|++|
T Consensus 131 --~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 131 --ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT----GQERGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp --EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC----CCTTCEEEEEECCSTTCCEEEEE
T ss_pred --chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc----CCcCcEEEEEEEEcCCCCEEEEE
Confidence 45567889999999999999 678999999999999999988776655542 4556799999987 78899999
Q ss_pred eCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCC
Q 010669 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG 454 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g 454 (504)
+.||.|++||+++++++..+.+|...|.+++|+|++.+|++|+.|+ |++||+++++....+..+ ...+.+++|+|++
T Consensus 205 s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 205 SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG--LERSWCIATHPTG 282 (304)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCS--SSSEEEEEECTTC
T ss_pred cCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCC--CccEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999 999999999998888765 5789999999987
Q ss_pred C--EEEEEeCc-EEEEEe
Q 010669 455 S--YLAVASAD-IRVYQV 469 (504)
Q Consensus 455 ~--~l~~~~~d-i~vw~~ 469 (504)
. ++++|+.+ +.+|++
T Consensus 283 ~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 283 RKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp GGGCEEEEETTEEEEEEC
T ss_pred CceEEEEecCCceEEEEe
Confidence 5 68888888 899987
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4e-37 Score=300.23 Aligned_cols=238 Identities=19% Similarity=0.437 Sum_probs=216.6
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC----ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG----QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
..|...|.+++|+|++++|++|+.|+.|++|++.++ .....+.+|.+.|.++.|++++. +++++.||+|++||+.
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~ 172 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIE 172 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETT
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECC
Confidence 457788999999999999999999999999998765 35667889999999999998775 8999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g 375 (504)
++ .....+.+|.+.|.+++|+|++++|++|+.||.|++||++++.....+. +|...|.+++|+|++++|++|
T Consensus 173 ~~---~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~l~s~ 244 (340)
T 1got_B 173 TG---QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATG 244 (340)
T ss_dssp TT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-----CCSSCEEEEEECTTSSEEEEE
T ss_pred CC---cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc-----CCcCCEEEEEEcCCCCEEEEE
Confidence 86 6778889999999999999999999999999999999999998887775 677899999999999999999
Q ss_pred eCCCcEEEEEcCCCceeeeeeC--CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECC
Q 010669 376 TSEALVKIWDVKSQANVAKFDG--HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDH 452 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~~--~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~ 452 (504)
+.||.|++||+++++.+..+.. +...|++++|+|+|.+|++|+.|+ |++||+.+++.+..+..| ...|.+++|+|
T Consensus 245 s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h--~~~v~~~~~s~ 322 (340)
T 1got_B 245 SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH--DNRVSCLGVTD 322 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECT
T ss_pred cCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecC--CCcEEEEEEcC
Confidence 9999999999999888777653 335799999999999999999998 999999999888888766 67999999999
Q ss_pred CCCEEEEEeCc--EEEEE
Q 010669 453 SGSYLAVASAD--IRVYQ 468 (504)
Q Consensus 453 ~g~~l~~~~~d--i~vw~ 468 (504)
+|.+|++|+.| |+||+
T Consensus 323 dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 323 DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEcCCccEEecC
Confidence 99999999999 99996
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.3e-37 Score=324.66 Aligned_cols=276 Identities=19% Similarity=0.279 Sum_probs=229.7
Q ss_pred cccCCCCCeEEEEeccCCC-EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~ 296 (504)
...+|...|.+++|+|++. .|++|+.|++|++||..+++....+.+|...|++++|+|++++|++|+.||+|++||+.+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 3567899999999999987 699999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCcceeEEec-------cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecC------------------
Q 010669 297 DGNYDCKHTLK-------DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA------------------ 351 (504)
Q Consensus 297 ~~~~~~~~~~~-------~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------------------ 351 (504)
+ .+...+. +|.+.|.+++|+|++++|++++.|++|++||+++++....+...
T Consensus 222 g---~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 222 G---TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp C---CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred C---cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 5 4555553 79999999999999999999999999999999998776554311
Q ss_pred --------------------CCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeee-e--------------
Q 010669 352 --------------------GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF-D-------------- 396 (504)
Q Consensus 352 --------------------~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~-~-------------- 396 (504)
...+|...|++++|+|+|++|++++.||.|++||+.++.....+ .
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 01368889999999999999999999999999999776433221 0
Q ss_pred -------------------------------------------------------------------CCCCCeEEEEEcC
Q 010669 397 -------------------------------------------------------------------GHVGAVTAISFSE 409 (504)
Q Consensus 397 -------------------------------------------------------------------~~~~~i~~l~~s~ 409 (504)
.|...+.+++|+|
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0234578899999
Q ss_pred CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEE--ccC
Q 010669 410 NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKT--FPD 484 (504)
Q Consensus 410 ~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~--~~~ 484 (504)
+|.+|++|+.|+ |++||+..+....... ..|...|.+++|+|+|++|++++.| +++|++.. .++.+.. +.+
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~---~~~~~~~~~~~~ 534 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN---NFELAHTNSWTF 534 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG---TTEESCCCCCCC
T ss_pred CCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCC---CCceeeeeeeee
Confidence 999999999998 9999998754321111 2336789999999999999999998 99999832 1444443 334
Q ss_pred CCCCCceeEEEEeecCcc
Q 010669 485 LSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 485 h~~~~~v~~l~~~~~g~~ 502 (504)
| .+.|.+++|+|+|+.
T Consensus 535 H--~~~V~~v~fspdg~~ 550 (611)
T 1nr0_A 535 H--TAKVACVSWSPDNVR 550 (611)
T ss_dssp C--SSCEEEEEECTTSSE
T ss_pred c--ccceeEEEECCCCCE
Confidence 7 889999999999974
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-37 Score=305.40 Aligned_cols=243 Identities=17% Similarity=0.249 Sum_probs=205.9
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEE----EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT----TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~----~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
..|...|++++|+|++.+ ++++.||+|+|||+.+++... ...+|...|++++|+|++++|++|+.||+|++||+.
T Consensus 91 ~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp EECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 357889999999999765 467789999999998876543 334799999999999999999999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC-CCEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD-GLILG 373 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd-g~~l~ 373 (504)
++ .++..+.+|...|.+++|+|++. ++++++.||.|++||+++++....+. ...+...+.+++|+|+ +.+|+
T Consensus 170 ~~---~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 170 QK---AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID---FCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp TT---EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC---CTTCCSCEEEEEECTTSTTEEE
T ss_pred CC---cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee---eccccccccchhhhhcccceEE
Confidence 86 77888899999999999999875 78999999999999999987766554 2255678999999996 57899
Q ss_pred EEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCC-cEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEEC
Q 010669 374 TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG-YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD 451 (504)
Q Consensus 374 ~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g-~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~ 451 (504)
+|+.|+.|++||+++++.+..+.+|...|++++|+|++ .+|++|+.|+ |+|||+++++.+..+ .|...|++++|+
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~---~H~~~V~~vafs 320 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL---SHRDFVTGVAWS 320 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC---CCSSCEEEEEEC
T ss_pred EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC---CCCCCEEEEEEe
Confidence 99999999999999999999999999999999999987 6899999998 999999998876654 347899999999
Q ss_pred C-CCCEEEEEeCc--EEEEEeecc
Q 010669 452 H-SGSYLAVASAD--IRVYQVASV 472 (504)
Q Consensus 452 ~-~g~~l~~~~~d--i~vw~~~~~ 472 (504)
| ++.+|++++.| |++|++...
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCCEEEEEcCCCeEEEEECCCC
Confidence 8 79999999998 999999543
No 25
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.7e-37 Score=299.65 Aligned_cols=262 Identities=18% Similarity=0.330 Sum_probs=214.7
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc--eEEEcccCccceeEEEEee--CCCEEEEEeCCCcEEEEe
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVT--EGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~s~--~~~~l~s~s~dg~i~iwd 293 (504)
+..+|...|++++|+|+|++|++|+.|++|++||+.++. .+..+.+|.+.|++++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456799999999999999999999999999999998764 4678899999999999986 488999999999999999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC---
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD--- 368 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd--- 368 (504)
+.++ .......+.+|...|.+++|+|+ +.+|++|+.||.|++||++.+....... ...+|...+.+++|+|+
T Consensus 88 ~~~~-~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 88 EENG-TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK--INNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp CSSS-CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC--BTTSSSSCBCCCEECCCCCC
T ss_pred CCCC-cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee--eeccccCCcceEEEccccCC
Confidence 9863 23456677899999999999998 7899999999999999998764322111 13367788999999997
Q ss_pred --------------CCEEEEEeCCCcEEEEEcCCC---ceeeeeeCCCCCeEEEEEcCCC----cEEEEEeCCc-EEEEE
Q 010669 369 --------------GLILGTGTSEALVKIWDVKSQ---ANVAKFDGHVGAVTAISFSENG----YYLATAAHDG-VKLWD 426 (504)
Q Consensus 369 --------------g~~l~~g~~dg~I~iwd~~~~---~~~~~~~~~~~~i~~l~~s~~g----~~l~s~~~d~-v~vwd 426 (504)
+.+|++|+.|+.|++||++.. +.+..+.+|...|.+++|+|++ .+|++++.|+ |++||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 478999999999999999755 4677888999999999999986 8999999998 99999
Q ss_pred cCCCc----ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCC
Q 010669 427 LRKLK----NFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 427 ~~~~~----~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h 485 (504)
+.+.. ....+..+ ...|.+++|+|+|++|++++.| ++||+.... ..|.++..+...
T Consensus 245 ~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~-g~~~~~~~~~~~ 306 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKF--NDVVWHVSWSITANILAVSGGDNKVTLWKESVD-GQWVCISDVNKG 306 (316)
T ss_dssp CSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEEESSSCEEEEEECTT-SCEEEEEECC--
T ss_pred ccCccccchhhhhhhcC--CCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC-CcEEEeeeccCC
Confidence 97631 12233333 6789999999999999999998 999998543 468888888764
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=297.03 Aligned_cols=251 Identities=24% Similarity=0.397 Sum_probs=213.1
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC--ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG--QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
+..+|...|.+++|+|++++|++|+.|+.+++|++..+ +.+..+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 56 ~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp ECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred eccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 34679999999999999999999999999999998766 4578889999999999999999999999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g 375 (504)
......+...+.+|...|.+++|+|++++|++++.|+.|++||++++....... ..+|...|.+++|+|+|++|++|
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~---~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT---LEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp TTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEE---ECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEE---ecCCCCceEEEEECCCCCEEEEE
Confidence 765556677888999999999999999999999999999999998876443222 22788899999999999999999
Q ss_pred eCCCcEEEEEcCCC---------------ceeeeeeC-CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc----ee
Q 010669 376 TSEALVKIWDVKSQ---------------ANVAKFDG-HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN----FR 434 (504)
Q Consensus 376 ~~dg~I~iwd~~~~---------------~~~~~~~~-~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~----~~ 434 (504)
+.||.|++||.... +++..+.+ |...|.+++|+|++..|++++.|+ |++|+...... ..
T Consensus 213 s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~ 292 (345)
T 3fm0_A 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF 292 (345)
T ss_dssp ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE
T ss_pred eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE
Confidence 99999999997432 22344444 888999999999999999999998 99999876431 11
Q ss_pred eee---cCCCCCCeeEEEECCCC-CEEEEEeCc--EEEEEeec
Q 010669 435 SFE---SSDSETPTNSVDFDHSG-SYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 435 ~~~---~~~~~~~v~~i~~~~~g-~~l~~~~~d--i~vw~~~~ 471 (504)
.+. ...|...|++++|+|++ .+|++|+.| |++|++..
T Consensus 293 ~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 293 SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 111 12347789999999998 599999998 99999943
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-36 Score=323.78 Aligned_cols=273 Identities=22% Similarity=0.351 Sum_probs=236.5
Q ss_pred cccCCCCCeEEEEeccCC-CEEEEEeCCCcEEEEcCCCC-----ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEE
Q 010669 218 LHKTSKPGIVSLDIHYSK-DVIATGGVDTNAVLFDRPSG-----QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~-~~l~sg~~dg~i~vwd~~~~-----~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~i 291 (504)
...+|...|++++|++++ ++|++|+.||+|++|++.+. .....+.+|...|.+++|+|++++|++|+.||+|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 356899999999999875 79999999999999998753 346778899999999999999999999999999999
Q ss_pred EeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC--
Q 010669 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369 (504)
Q Consensus 292 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-- 369 (504)
||+.++ .....+.+|...|.+++|+|++++|++|+.|++|++||+.......... ...+|...|.+++|+|++
T Consensus 457 wd~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 457 WDLAAG---VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE--GGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp EETTTT---EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS--STTSCSSCEEEEEECSCSSS
T ss_pred EECCCC---cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc--CCCCCCCcEEEEEEeCCCCc
Confidence 999876 6778888999999999999999999999999999999987654433322 134688899999999987
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEE
Q 010669 370 LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSV 448 (504)
Q Consensus 370 ~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i 448 (504)
..+++|+.||.|++||+++++....+.+|.+.|++++|+|+|.+|++|+.|+ |++||+++++.+..+.. ...+.++
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~ 608 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA---NSVIHAL 608 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC---SSCEEEE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC---CCcEEEE
Confidence 6899999999999999999999999999999999999999999999999998 99999999988776654 4679999
Q ss_pred EECCCCCEEEEEeCc-EEEEEeeccCccceeEEEccCCCC-----------------CCceeEEEEeecCcc
Q 010669 449 DFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFPDLSG-----------------TGAASFLFLFVLGQT 502 (504)
Q Consensus 449 ~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~~~h~~-----------------~~~v~~l~~~~~g~~ 502 (504)
+|+|++.+|++++.+ |+|||+ .+...+..+..+.. ...+++++|+|+|+.
T Consensus 609 ~~sp~~~~l~~~~~~~i~iwd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~ 676 (694)
T 3dm0_A 609 CFSPNRYWLCAATEHGIKIWDL----ESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGST 676 (694)
T ss_dssp EECSSSSEEEEEETTEEEEEET----TTTEEEEEECCCCC----------------CCCCEEEEEECTTSSE
T ss_pred EEcCCCcEEEEEcCCCEEEEEC----CCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCE
Confidence 999999999998887 999998 56666666653310 123789999999864
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-36 Score=299.51 Aligned_cols=250 Identities=18% Similarity=0.208 Sum_probs=218.6
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc--eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
++..|..+|++++|+|++++|++|+.||.|++||+.+++ .+..+.+|...|++++|+|++++|++++.||.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 345688999999999999999999999999999999887 888999999999999999999999999999999999997
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g 375 (504)
++ .......+..|...|.+++|+|++++|++++.||.|++||++.+......... ...|...|.+++|+|++.+|++|
T Consensus 83 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 83 GR-TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TT-EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEE
T ss_pred CC-eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee-ecccCCCeeEEEEcCCCCEEEEE
Confidence 64 22234445679999999999999999999999999999999887632111110 22567899999999999999999
Q ss_pred eCCCcEEEEEcC------------------CCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeee
Q 010669 376 TSEALVKIWDVK------------------SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436 (504)
Q Consensus 376 ~~dg~I~iwd~~------------------~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~ 436 (504)
+.||.|++||++ .++.+..+.+|...|.+++|+|++.+|++++.|+ |++||+++++.+..+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 999999999954 6778888889999999999999999999999998 999999999988888
Q ss_pred ecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEeec
Q 010669 437 ESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVAS 471 (504)
Q Consensus 437 ~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~ 471 (504)
..+ ...+.+++|+|++.+|+++.+. +++|++..
T Consensus 241 ~~~--~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 241 ASE--TLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp ECS--SCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred ccC--CCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 766 6789999999999999988544 99999965
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.4e-36 Score=292.10 Aligned_cols=243 Identities=19% Similarity=0.335 Sum_probs=206.3
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|.+++|+|++.++++|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||+...
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999742
Q ss_pred CCcceeEEe---ccCCcCeEEEEEccCC----------CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEE
Q 010669 298 GNYDCKHTL---KDHTAEVQAVTVHATN----------KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA 364 (504)
Q Consensus 298 ~~~~~~~~~---~~h~~~v~~l~~~p~~----------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 364 (504)
..... ..|...|.+++|+|++ .+|++++.||.|++||. .......+. +|...|.+++
T Consensus 151 ----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-----~h~~~v~~~~ 220 (343)
T 2xzm_R 151 ----CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-----AHESNVNHLS 220 (343)
T ss_dssp ----EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-----CCSSCEEEEE
T ss_pred ----ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-----CccccceEEE
Confidence 23332 3788999999999987 79999999999999994 455555554 6778999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCC-ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCccee--eeecC--
Q 010669 365 FHPDGLILGTGTSEALVKIWDVKSQ-ANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFR--SFESS-- 439 (504)
Q Consensus 365 ~~pdg~~l~~g~~dg~I~iwd~~~~-~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~--~~~~~-- 439 (504)
|+|+|++|++|+.||.|++||++.. .....+. +...|.+++|+|++.+++++++++|++||+.+++... .+...
T Consensus 221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 299 (343)
T 2xzm_R 221 ISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPI 299 (343)
T ss_dssp ECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSG
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcc
Confidence 9999999999999999999999544 3444443 5567999999999999887776669999998776544 33211
Q ss_pred -------CCCCCeeEEEECCCCCEEEEEeCc--EEEEEeec
Q 010669 440 -------DSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 440 -------~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
.+...+.+++|+|+|++|++|+.| |++|++..
T Consensus 300 ~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 300 TKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp GGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred hhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 235679999999999999999999 99999843
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-36 Score=301.20 Aligned_cols=270 Identities=19% Similarity=0.295 Sum_probs=234.2
Q ss_pred cCCCCCeEEEEeccCCC-EEEEEeCCCcEEEEcC----CCCc------eEEEccc----------CccceeEEEEeeCCC
Q 010669 220 KTSKPGIVSLDIHYSKD-VIATGGVDTNAVLFDR----PSGQ------IVTTLSG----------HSKKVTSVKFVTEGD 278 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~-~l~sg~~dg~i~vwd~----~~~~------~~~~~~~----------h~~~v~~l~~s~~~~ 278 (504)
..|.++|++++|+|+++ +|++|+.||.|++|++ .+++ ....+.. |.+.|++++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34568999999999999 9999999999999999 8887 4555544 688999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC------
Q 010669 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAG------ 352 (504)
Q Consensus 279 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------ 352 (504)
+|++|+.||.|++||... .....+..|...|.+++|+|++++|++++.||.|++||+.+++....+....
T Consensus 122 ~l~~~~~dg~i~i~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTG----ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEEETTSCEEEEETTS----CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEEeCCCeEEEEeCCC----CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 999999999999999433 6777888999999999999999999999999999999999887766543211
Q ss_pred ---------------------------------------------CCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q 010669 353 ---------------------------------------------TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVK 387 (504)
Q Consensus 353 ---------------------------------------------~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~ 387 (504)
...|...|.+++|+|++.+|++++.||.|++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 12467789999999999999999999999999999
Q ss_pred CCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--E
Q 010669 388 SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--I 464 (504)
Q Consensus 388 ~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i 464 (504)
+++.+..+.+|...|.+++|+|++ +|++++.++ |++||+++++.+..+..+ ...+.+++|+|++++|++++.| |
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD--GVPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT--TCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC--CccEEEEEEcCCCCEEEEEECCCeE
Confidence 999999999999999999999999 999999998 999999999988888765 6789999999999999999988 9
Q ss_pred EEEEeeccCccce--------------------eEEEccCCCCCC--ceeEEEEeecCcc
Q 010669 465 RVYQVASVKADWN--------------------CIKTFPDLSGTG--AASFLFLFVLGQT 502 (504)
Q Consensus 465 ~vw~~~~~~~~~~--------------------~i~~~~~h~~~~--~v~~l~~~~~g~~ 502 (504)
++|++ .... .+..+.+| .. .|++++|+++|+.
T Consensus 355 ~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 355 NVYDL----KKLNSKSRSLYGNRDGILNPLPIPLYASYQSS--QDNDYIFDLSWNCAGNK 408 (425)
T ss_dssp EEEEC----HHHHC--------------CEECCEEEEECCT--TCCCCEEEEEECTTSSE
T ss_pred EEEEC----CCCccceeeeecccccccCcccchhhhhhcCc--ccCCceEEEEccCCCce
Confidence 99999 4444 88999988 44 9999999999864
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-36 Score=293.22 Aligned_cols=271 Identities=18% Similarity=0.294 Sum_probs=238.2
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~- 106 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG- 106 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeEEEEeecCC------CCCCCC--CeEEEEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-----NTWCFYDLSSGICLTQVSDAG------TDGRPE--GYTSAAF 365 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~------~~~~~~--~v~~~~~ 365 (504)
.....+. |...|.+++|+|+++++++++.+ |.|.+||+..+.....+.... ...+.. .+.+++|
T Consensus 107 --~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 107 --QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp --CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred --cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 5566665 88899999999999999999999 999999997653211111000 002223 8999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCC-CceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCC
Q 010669 366 HPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSET 443 (504)
Q Consensus 366 ~pdg~~l~~g~~dg~I~iwd~~~-~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~ 443 (504)
+|++++|++++.||.|++||+++ ++.+..+..|...|.+++|+|++.+|++++.|+ |++||+++++.+..+.. ..
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~ 260 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET---DC 260 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---SS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC---CC
Confidence 99999999999999999999998 788889999999999999999999999999998 99999999998888873 57
Q ss_pred CeeEEEECCCCCEEEEEeCc----------------EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 444 PTNSVDFDHSGSYLAVASAD----------------IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 444 ~v~~i~~~~~g~~l~~~~~d----------------i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.+..++|+|++.++++++.+ +++|++ ..++.+..+.+| .+.|++++|+|+|+.
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~----~~~~~~~~~~~~--~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK----IFEEEIGRVQGH--FGPLNTVAISPQGTS 329 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEET----TTCCEEEEEECC--SSCEEEEEECTTSSE
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec----CCCcchhheecc--cCcEEEEEECCCCCE
Confidence 89999999999999998763 678887 677888999998 889999999999874
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-36 Score=292.69 Aligned_cols=242 Identities=21% Similarity=0.395 Sum_probs=198.6
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC-------CceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEe
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS-------GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd 293 (504)
.|...|.+++|+|++++|++|+.|++|++||+.. .+.+..+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3899999999999999999999999999999842 356778899999999999999999999999999999999
Q ss_pred CCCC-CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--eEEEEeecCCCCCCCCCeEEEEECCC--
Q 010669 294 GSED-GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG--ICLTQVSDAGTDGRPEGYTSAAFHPD-- 368 (504)
Q Consensus 294 ~~~~-~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~~pd-- 368 (504)
+... ....++..+.+|...|.+++|+|++++|++|+.|++|++||+.++ +++..+. +|...|.+++|+|+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~ 210 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-----GHEGTVWSSDFDKTEG 210 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCSSS
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-----CCCCcEEEEEecCCCC
Confidence 9532 334567788899999999999999999999999999999999876 4445443 78889999999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCC--------ceeeeeeC-CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc--ceeee
Q 010669 369 GLILGTGTSEALVKIWDVKSQ--------ANVAKFDG-HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK--NFRSF 436 (504)
Q Consensus 369 g~~l~~g~~dg~I~iwd~~~~--------~~~~~~~~-~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~--~~~~~ 436 (504)
+.+|++|+.|+.|++||++.+ .....+.+ |...|.+++|++++ +|++++.|+ |++||..++. .....
T Consensus 211 ~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~ 289 (330)
T 2hes_X 211 VFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKR 289 (330)
T ss_dssp SCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred eeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecc
Confidence 779999999999999999765 34445554 88999999999765 788999998 9999998764 22222
Q ss_pred ecCCCCC-CeeEEEECC--CCCEEEEEeCc--EEEEEe
Q 010669 437 ESSDSET-PTNSVDFDH--SGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 437 ~~~~~~~-~v~~i~~~~--~g~~l~~~~~d--i~vw~~ 469 (504)
...|.. .|.+++|+| ++++|++|+.| |+||++
T Consensus 290 -~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 290 -ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp -SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred -ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 122344 899999999 78999999999 999997
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.7e-36 Score=312.00 Aligned_cols=263 Identities=25% Similarity=0.420 Sum_probs=237.5
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|.+++|+|++++|++++.||.|++||.. +..+..+.+|...|.+++|+|++++|++++.||.|++||...
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~- 375 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG- 375 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-
Confidence 345788999999999999999999999999999976 455677889999999999999999999999999999999654
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.....+.+|...|.+++|+|++++|++++.|+.|++||. +++....+. +|...|++++|+||+++|++++.
T Consensus 376 ---~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~-----~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 376 ---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-----GHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp ---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEE-----CCSSCEEEEEECTTSSEEEEEET
T ss_pred ---CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec-----CCCCCeEEEEECCCCCEEEEEcC
Confidence 677788899999999999999999999999999999996 455566554 67789999999999999999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCE
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~ 456 (504)
|+.|++||. +++.+..+.+|...|++++|+|+|.+|++++.|+ |++||. +++.+..+..+ ...|++++|+|+|++
T Consensus 447 d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h--~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 447 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH--SSSVRGVAFSPDGQT 522 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECC--SSCEEEEEECTTSSC
T ss_pred CCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCC--CCCEEEEEEcCCCCE
Confidence 999999996 6778888999999999999999999999999998 999995 67778888766 678999999999999
Q ss_pred EEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 457 LAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 457 l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
|++++.| |+|||. +++++..+.+| .+.|++++|+|+|+.
T Consensus 523 l~s~~~dg~v~lwd~-----~~~~~~~~~~h--~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 523 IASASDDKTVKLWNR-----NGQLLQTLTGH--SSSVWGVAFSPDGQT 563 (577)
T ss_dssp EEEEETTSEEEEECT-----TSCEEEEEECC--SSCEEEEEECTTSSC
T ss_pred EEEEECcCEEEEEeC-----CCCEEEEEcCC--CCCEEEEEEcCCCCE
Confidence 9999998 999995 46789999999 889999999999974
No 34
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.7e-35 Score=286.25 Aligned_cols=268 Identities=22% Similarity=0.344 Sum_probs=232.5
Q ss_pred ccCCCCCeEEEEeccC-CCEEEEEeCCCcEEEEcCCCCc-----eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEE
Q 010669 219 HKTSKPGIVSLDIHYS-KDVIATGGVDTNAVLFDRPSGQ-----IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~-~~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iw 292 (504)
..+|.+.|++|+|+|+ +++|++|+.||+|+|||+.+.+ ....+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 5689999999999997 6899999999999999987643 467889999999999999999999999999999999
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC--C
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG--L 370 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg--~ 370 (504)
+.... ........+...+..+.+++++++|++++.|+.+++||+......... ..+|...+.+++|++++ .
T Consensus 114 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 114 DLTTG---TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ----DESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp ETTTT---EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----SSSCSSCEEEEEECSCSSSC
T ss_pred eeccc---ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE----eccccCcccceEEccCCCCc
Confidence 99875 555666678888999999999999999999999999999877654433 23677899999999864 5
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEE
Q 010669 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVD 449 (504)
Q Consensus 371 ~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~ 449 (504)
++++++.|+.|++||+++++.+..+.+|.+.|++++|+|+|.+|++|+.|+ |++||+++.+.+..+..+ ..+.++.
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~---~~v~~~~ 263 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG---DIINALC 263 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS---SCEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC---ceEEeee
Confidence 788999999999999999999999999999999999999999999999999 999999999988887754 5799999
Q ss_pred ECCCCCEEEEEeCc-EEEEEeeccCccceeEEEc---------cCCCCCCceeEEEEeecCcc
Q 010669 450 FDHSGSYLAVASAD-IRVYQVASVKADWNCIKTF---------PDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 450 ~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~---------~~h~~~~~v~~l~~~~~g~~ 502 (504)
|+|++.+++++... |++|++ .....+..+ .+| ...|++++|+|+|+.
T Consensus 264 ~~~~~~~~~~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 264 FSPNRYWLCAATGPSIKIWDL----EGKIIVDELKQEVISTSSKAE--PPQCTSLAWSADGQT 320 (340)
T ss_dssp ECSSSSEEEEEETTEEEEEET----TTTEEEEEECCC-------CC--CCCEEEEEECTTSSE
T ss_pred cCCCCceeeccCCCEEEEEEC----CCCeEEEeccccceeeeccCC--CCCEEEEEECCCCCE
Confidence 99999888777666 999998 444444443 345 789999999999864
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-38 Score=310.13 Aligned_cols=246 Identities=17% Similarity=0.191 Sum_probs=208.6
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC--ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG--QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
++..+..+|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|...|++++|+|++++|++++.||+|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34556778999999999999999999999999999988 7788889999999999999999999999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeE---EEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC---LTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
++..+.....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. .|...|.+++|+|++++|
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEE
Confidence 8643446777889999999999999999999999999999999998863 444431 377899999999999999
Q ss_pred EEEeCCCcEEEEEcC------------------CCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc-
Q 010669 373 GTGTSEALVKIWDVK------------------SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN- 432 (504)
Q Consensus 373 ~~g~~dg~I~iwd~~------------------~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~- 432 (504)
++|+.||.|++||++ .++.+..+ +|...|++++|+|+|.+|++++.|+ |++||+++++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 999999999999985 34566667 8999999999999999999999998 99999999887
Q ss_pred ---eeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEee
Q 010669 433 ---FRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVA 470 (504)
Q Consensus 433 ---~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~ 470 (504)
+..+..+ ...|.+++|+|+|++|++++.+ +.+|+..
T Consensus 241 ~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 241 PRALITVKLS--QLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEECCCEECS--SSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred ceeeEeecCC--CCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 6666665 6789999999999999999888 7788774
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.3e-36 Score=293.95 Aligned_cols=239 Identities=20% Similarity=0.357 Sum_probs=214.8
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC------ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEe
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG------QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd 293 (504)
..|...|.+++|+|+|.+|++|+.|+.+++|++... .....+.+|...|.+++|+|++..|++++.||+|++||
T Consensus 103 ~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd 182 (354)
T 2pbi_B 103 TMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWD 182 (354)
T ss_dssp ECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEe
Confidence 346778999999999999999999999999997643 34556778999999999999999999999999999999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHA--TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~ 371 (504)
+.++ .++..+.+|...|.+++|+| ++++|++|+.||.|++||+++++.+..+. +|...|.+++|+|++.+
T Consensus 183 ~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 183 VESG---QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-----THESDVNSVRYYPSGDA 254 (354)
T ss_dssp TTTC---CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSE
T ss_pred CCCC---eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----CCCCCeEEEEEeCCCCE
Confidence 9886 67888899999999999988 46899999999999999999999887775 67789999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeeeCC--CCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEE
Q 010669 372 LGTGTSEALVKIWDVKSQANVAKFDGH--VGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSV 448 (504)
Q Consensus 372 l~~g~~dg~I~iwd~~~~~~~~~~~~~--~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i 448 (504)
|++|+.||.|++||++.++.+..+..+ ...+++++|+|+|.+|++|+.|+ |++||+.++..+..+..| ...|.++
T Consensus 255 l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h--~~~v~~l 332 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGH--ENRVSTL 332 (354)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC--SSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECC--CCcEEEE
Confidence 999999999999999998877766543 35789999999999999999998 999999999888877665 6899999
Q ss_pred EECCCCCEEEEEeCc--EEEEE
Q 010669 449 DFDHSGSYLAVASAD--IRVYQ 468 (504)
Q Consensus 449 ~~~~~g~~l~~~~~d--i~vw~ 468 (504)
+|+|+|++|++|+.| |+||+
T Consensus 333 ~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 333 RVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999 99995
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-35 Score=296.11 Aligned_cols=242 Identities=24% Similarity=0.429 Sum_probs=213.4
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
...|.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||+.++ .+
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~---~~ 199 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG---QC 199 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---EE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC---ee
Confidence 346999999999999999999999999999999999999999999999999999999999999999999999875 45
Q ss_pred eEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecC--CCCCCCCCeEEEEECCCCCEEEEEeCCC
Q 010669 303 KHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDA--GTDGRPEGYTSAAFHPDGLILGTGTSEA 379 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~pdg~~l~~g~~dg 379 (504)
...+. +...+.+++|+| ++++|++|+.||.|++||++++..+..+... ...+|...|.+++|+|+|.+|++|+.||
T Consensus 200 ~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 200 SLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 55554 567799999999 8999999999999999999999877766321 1236788999999999999999999999
Q ss_pred cEEEEEcCCC------------ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCee
Q 010669 380 LVKIWDVKSQ------------ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN 446 (504)
Q Consensus 380 ~I~iwd~~~~------------~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~ 446 (504)
.|++||+++. .+...+.+|...|.+++|+|++.+|++|+.|+ |++||+++++.+..+..| ...|.
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h--~~~v~ 356 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH--RNSVI 356 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC--CCCEE
Confidence 9999999753 34567788999999999999999999999998 999999999988888776 67899
Q ss_pred EEEECC------CCCEEEEEeCc--EEEEEee
Q 010669 447 SVDFDH------SGSYLAVASAD--IRVYQVA 470 (504)
Q Consensus 447 ~i~~~~------~g~~l~~~~~d--i~vw~~~ 470 (504)
+++|++ ++++|++|+.| |+||++.
T Consensus 357 ~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 357 SVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 999886 68899999999 9999984
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.8e-36 Score=295.41 Aligned_cols=268 Identities=15% Similarity=0.202 Sum_probs=225.0
Q ss_pred cccCCCCCeEEEEeccCC-CEEEEEeCCCcEEEEcCCCCceEEEcc--cCccceeEEEEee-CCCEEEEEeCCCcEEEEe
Q 010669 218 LHKTSKPGIVSLDIHYSK-DVIATGGVDTNAVLFDRPSGQIVTTLS--GHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~l~~s~-~~~~l~s~s~dg~i~iwd 293 (504)
...+|...|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++++|++++.||.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 356789999999999999 899999999999999999888777665 6999999999999 788999999999999999
Q ss_pred CCCCCCcceeEEec---cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 294 GSEDGNYDCKHTLK---DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 294 ~~~~~~~~~~~~~~---~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
+.. .....+. .|...|.+++|+|++++|++++.||.|++||++ ++.+..+. .|...|.+++|+|++.
T Consensus 148 ~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~-----~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 148 FSG----SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK-----LHKAKVTHAEFNPRCD 217 (383)
T ss_dssp TTS----CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE-----CSSSCEEEEEECSSCT
T ss_pred CCC----CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec-----cCCCcEEEEEECCCCC
Confidence 986 3334443 445889999999999999999999999999994 66666665 6778999999999998
Q ss_pred -EEEEEeCCCcEEEEEcCC----CceeeeeeCCCCCeEEEEEcC-CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCC--
Q 010669 371 -ILGTGTSEALVKIWDVKS----QANVAKFDGHVGAVTAISFSE-NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-- 441 (504)
Q Consensus 371 -~l~~g~~dg~I~iwd~~~----~~~~~~~~~~~~~i~~l~~s~-~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~-- 441 (504)
+|++|+.||.|++||+++ +..+..+ +|...|++++|+| +|.+|++++.|+ |++||+++++....+..+..
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 296 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQ 296 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccc
Confidence 999999999999999998 5566666 5999999999999 999999999998 99999999887776664321
Q ss_pred ---C----------CCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 442 ---E----------TPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 442 ---~----------~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
. ..+..++|+|+|++ +++.| |+|||+ .+++.+..+.+|.+.+.+..++|+|+|+.
T Consensus 297 ~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~----~~~~~~~~l~~~~~~~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 297 FQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA----NSGGLVHQLRDPNAAGIISLNKFSPTGDV 366 (383)
T ss_dssp CTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET----TTCCEEEEECBTTBCSCCCEEEECTTSSE
T ss_pred cccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec----CCCceeeeecCCCCCceEEEEEEecCccE
Confidence 1 23334555666655 45556 999998 67888999988644778888899999975
No 39
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=284.59 Aligned_cols=266 Identities=16% Similarity=0.208 Sum_probs=236.1
Q ss_pred eccccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 216 ~~~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
.....+|...|++++| +++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|++.
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 89 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLF 89 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEee
Confidence 3446789999999999 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC-CCCEEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP-DGLILGT 374 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~ 374 (504)
..........+.+|...|.++.| +++++++++.||.|++|| .+.....+. .|...+.+++|+| ++.++++
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ-----AHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-----CCSSCEEEEEEEETTTTEEEE
T ss_pred ecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-----cCCCceeEEEEccCCCCEEEE
Confidence 76555667778899999999999 578999999999999999 566666665 5678899999998 9999999
Q ss_pred EeCCCcEEEEEcCCCceeeeeeC-CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECC
Q 010669 375 GTSEALVKIWDVKSQANVAKFDG-HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDH 452 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~~~~-~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~ 452 (504)
++.||.|++|| ..+....+.. |...|.+++|+|++. +++++.++ |++||+++++.+..+..+ ...|.+++|+|
T Consensus 161 ~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~ 235 (313)
T 3odt_A 161 ASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGH--ESFVYCIKLLP 235 (313)
T ss_dssp EETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECT
T ss_pred EECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcC--CceEEEEEEec
Confidence 99999999999 4556667766 889999999999998 88899998 999999999998888765 67899999999
Q ss_pred CCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCccc
Q 010669 453 SGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQTC 503 (504)
Q Consensus 453 ~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~~ 503 (504)
++ .|++++.| |++|++ .+++.+..+..| .+.|++++|+++|+++
T Consensus 236 ~~-~l~~~~~dg~v~iwd~----~~~~~~~~~~~~--~~~i~~~~~~~~~~~~ 281 (313)
T 3odt_A 236 NG-DIVSCGEDRTVRIWSK----ENGSLKQVITLP--AISIWSVDCMSNGDII 281 (313)
T ss_dssp TS-CEEEEETTSEEEEECT----TTCCEEEEEECS--SSCEEEEEECTTSCEE
T ss_pred CC-CEEEEecCCEEEEEEC----CCCceeEEEecc--CceEEEEEEccCCCEE
Confidence 99 57777777 999998 678889999888 7899999999999764
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4e-36 Score=294.94 Aligned_cols=277 Identities=11% Similarity=0.208 Sum_probs=234.9
Q ss_pred ccccCCCCCeEEEEeccC----CCEEEEEeCCCcEEEEcCCCCceEEEccc-----CccceeEEEEeeC----CCEEEEE
Q 010669 217 PLHKTSKPGIVSLDIHYS----KDVIATGGVDTNAVLFDRPSGQIVTTLSG-----HSKKVTSVKFVTE----GDLFLTG 283 (504)
Q Consensus 217 ~~~~~~~~~I~~~~~s~~----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----h~~~v~~l~~s~~----~~~l~s~ 283 (504)
.+..+|..+|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|++++|+|+ +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 456789999999999984 45667777778999999998877766654 5578999999998 6799999
Q ss_pred eCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEE
Q 010669 284 SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362 (504)
Q Consensus 284 s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 362 (504)
+.||.|++||+.++ ..+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+.. ...|...|.+
T Consensus 92 ~~dg~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~ 166 (366)
T 3k26_A 92 GSRGIIRIINPITM---QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG--VEGHRDEVLS 166 (366)
T ss_dssp ETTCEEEEECTTTC---CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS--TTSCSSCEEE
T ss_pred cCCCEEEEEEchhc---eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc--cccccCceeE
Confidence 99999999999875 67778889999999999999 899999999999999999999988877632 2367789999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeC----------------------------CCCCeEEEEEcCCCcEE
Q 010669 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG----------------------------HVGAVTAISFSENGYYL 414 (504)
Q Consensus 363 ~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~----------------------------~~~~i~~l~~s~~g~~l 414 (504)
++|+|++.+|++++.||.|++||+++++.+..+.. |...|.+++|+ +.+|
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l 244 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLI 244 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEE
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEE
Confidence 99999999999999999999999998765544433 88999999998 7799
Q ss_pred EEEeCCc-EEEEEcCCCcc--------------eeeeecCCCCCCeeEEEECCC--CCEEEEEeCc--EEEEEeeccCcc
Q 010669 415 ATAAHDG-VKLWDLRKLKN--------------FRSFESSDSETPTNSVDFDHS--GSYLAVASAD--IRVYQVASVKAD 475 (504)
Q Consensus 415 ~s~~~d~-v~vwd~~~~~~--------------~~~~~~~~~~~~v~~i~~~~~--g~~l~~~~~d--i~vw~~~~~~~~ 475 (504)
++++.|+ |++||++++.. +..+..+ ...|.+++|+|+ +++|++++.| |++|++......
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS--QCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS--SCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheecccccc--CCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 9999998 99999988654 4445444 568999999999 9999999988 999999654444
Q ss_pred ceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 476 WNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 476 ~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
...+..+.+|.+.+.|++++|+|+|+.
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~s~~~~~ 349 (366)
T 3k26_A 323 KAKCTTLTHHKCGAAIRQTSFSRDSSI 349 (366)
T ss_dssp GCEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred cccceEEcccccCCceEEEEeCCCCCe
Confidence 456678888766789999999999874
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.5e-36 Score=297.39 Aligned_cols=277 Identities=16% Similarity=0.175 Sum_probs=235.8
Q ss_pred ccccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc------eEEEcccCccceeEEEEeeC----C---CEEEEE
Q 010669 217 PLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ------IVTTLSGHSKKVTSVKFVTE----G---DLFLTG 283 (504)
Q Consensus 217 ~~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~------~~~~~~~h~~~v~~l~~s~~----~---~~l~s~ 283 (504)
....+|...|++++|+| ++|++|+.||.|++||+.+++ .+..+.+|...|++++|+|+ + ++|+++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 34678999999999998 899999999999999999887 78888899999999999999 9 999999
Q ss_pred eCCCcEEEEeCCCCCC--cceeEEeccC-----CcCeEEEEEc----cCCCE-EEEEeCCCeEEEEECCC------CeEE
Q 010669 284 SADKTVRVWQGSEDGN--YDCKHTLKDH-----TAEVQAVTVH----ATNKY-FVTASLDNTWCFYDLSS------GICL 345 (504)
Q Consensus 284 s~dg~i~iwd~~~~~~--~~~~~~~~~h-----~~~v~~l~~~----p~~~~-l~s~s~dg~i~iwd~~~------~~~~ 345 (504)
+.||.|++||+.++.. ......+..| ...|.+++|+ |++++ |++++.||.|++||+++ +..+
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 9999999999987521 0016677778 5899999999 99999 99999999999999988 5444
Q ss_pred E-----Eeec--CCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeC---C---CCCeEEEEEcCCCc
Q 010669 346 T-----QVSD--AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---H---VGAVTAISFSENGY 412 (504)
Q Consensus 346 ~-----~~~~--~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~---~---~~~i~~l~~s~~g~ 412 (504)
. .+.. .....|...+.+++|+|++ +|++|+.||.|++||+++++.+..+.. | ...|.+++|+|++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 246 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC
Confidence 3 3321 0002466789999999999 999999999999999999999999998 8 99999999999999
Q ss_pred EEEEEeCC---c-EEEEEcCCCcceeeeecCC-----------CCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCcc
Q 010669 413 YLATAAHD---G-VKLWDLRKLKNFRSFESSD-----------SETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKAD 475 (504)
Q Consensus 413 ~l~s~~~d---~-v~vwd~~~~~~~~~~~~~~-----------~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~ 475 (504)
+|++++.+ + |++||+++++.+..+.... +...|.+++|+|++++|++++.| |++|++ ..
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~----~~ 322 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV----KT 322 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET----TT
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc----CC
Confidence 99999999 8 9999999999888887611 36789999999999999999988 999998 66
Q ss_pred ceeEEEcc------CC-------------CCCCceeEEEEeecC
Q 010669 476 WNCIKTFP------DL-------------SGTGAASFLFLFVLG 500 (504)
Q Consensus 476 ~~~i~~~~------~h-------------~~~~~v~~l~~~~~g 500 (504)
++.+..+. +| .+.+.|++++|+++|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 78888887 54 016789999999998
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.1e-35 Score=283.73 Aligned_cols=266 Identities=17% Similarity=0.291 Sum_probs=223.6
Q ss_pred ccccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC----ceEEEcccCccceeEEEEee--CCCEEEEEeCCCcEE
Q 010669 217 PLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG----QIVTTLSGHSKKVTSVKFVT--EGDLFLTGSADKTVR 290 (504)
Q Consensus 217 ~~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~s~--~~~~l~s~s~dg~i~ 290 (504)
.+..+|...|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++|+.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 356789999999999999999999999999999999876 46777889999999999999 699999999999999
Q ss_pred EEeCCCCCC------cceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeEEEEee--------cCCCC
Q 010669 291 VWQGSEDGN------YDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNTWCFYDLSSGICLTQVS--------DAGTD 354 (504)
Q Consensus 291 iwd~~~~~~------~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~--------~~~~~ 354 (504)
+||+..+.. +.....+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+. .....
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 999987421 2456777899999999999999 9999999999999999998875432221 11123
Q ss_pred CCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCC----cEEEEEeCCc-EEE
Q 010669 355 GRPEGYTSAAFHPD---GLILGTGTSEALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENG----YYLATAAHDG-VKL 424 (504)
Q Consensus 355 ~~~~~v~~~~~~pd---g~~l~~g~~dg~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g----~~l~s~~~d~-v~v 424 (504)
.+...+.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|...|++++|+|++ .+|++++.|+ |++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 56778999999997 99999999999998888877765 67788899999999999998 8999999999 999
Q ss_pred EEcCCC----------------------------------------------cceeeeecCCCCCCeeEEEECCCCCEEE
Q 010669 425 WDLRKL----------------------------------------------KNFRSFESSDSETPTNSVDFDHSGSYLA 458 (504)
Q Consensus 425 wd~~~~----------------------------------------------~~~~~~~~~~~~~~v~~i~~~~~g~~l~ 458 (504)
||++.+ +.+..+.. |...|++++|+|++++|+
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECT--TSSCEEEEEECSSSCCEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--ccccEEEEEEcCCCCEEE
Confidence 999864 33344443 367899999999999999
Q ss_pred EEeCc--EEEEEeeccCccceeEEEccCC
Q 010669 459 VASAD--IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 459 ~~~~d--i~vw~~~~~~~~~~~i~~~~~h 485 (504)
+++.| |+||++... +.+.++..+..|
T Consensus 323 s~~~dg~v~iw~~~~~-~~~~~~~~~~~~ 350 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYS-NEFKCMSVITAQ 350 (351)
T ss_dssp EEETTSCEEEEEECTT-SCEEEEEEEC--
T ss_pred EecCCCcEEEEecCcC-cchhheeehccc
Confidence 99998 999999653 457777777665
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.5e-35 Score=282.92 Aligned_cols=265 Identities=17% Similarity=0.278 Sum_probs=230.3
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCce---EEEcc--cCccceeEEEEeeCCCEEEEEeCCCcEEEEeC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI---VTTLS--GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~---~~~~~--~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~ 294 (504)
..|...|++++|+|++++|++++ ||.|++||+.+++. +..+. +|...|.+++|+|++++|++++.||.|++||+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 36889999999999999999999 99999999987653 22332 78999999999999999999999999999999
Q ss_pred CCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
.+.. ......+..|...|.+++|+|+++++++++.||.|++||+++++....+. .|...+.+++|+|++.+|++
T Consensus 127 ~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 127 AAPT-PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp CCC---EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEE
T ss_pred CCCC-cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEE
Confidence 8752 23566777899999999999999999999999999999999998887775 56788999999999999999
Q ss_pred EeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 375 GTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
++.||.|++||+++++.+..+. +...+.+++|+|++.+|++++.++ |++||+++.+.. .+. .+...+.+++|+|+
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~--~~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLH--LHESCVLSLKFAYC 276 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EEC--CCSSCEEEEEECTT
T ss_pred EecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEc--CCccceeEEEECCC
Confidence 9999999999999998887776 778999999999999999999998 999999987653 333 34678999999999
Q ss_pred CCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 454 GSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 454 g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+++|++++.| +++|++ ..++.+... .| ...|+++.|+++|+.
T Consensus 277 ~~~l~~~~~dg~i~~~~~----~~~~~~~~~-~~--~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 277 GKWFVSTGKDNLLNAWRT----PYGASIFQS-KE--SSSVLSCDISVDDKY 320 (337)
T ss_dssp SSEEEEEETTSEEEEEET----TTCCEEEEE-EC--SSCEEEEEECTTSCE
T ss_pred CCEEEEecCCCcEEEEEC----CCCeEEEEe-cC--CCcEEEEEECCCCCE
Confidence 9999999988 999998 455555444 45 778999999999864
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4e-35 Score=282.28 Aligned_cols=243 Identities=23% Similarity=0.418 Sum_probs=218.5
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
....|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||+.++
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 139 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 139 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+.. .+...+.+++|+|++++|++++.
T Consensus 140 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 140 ---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID----DDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp ---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC----SSCCCEEEEEECTTSSEEEEEET
T ss_pred ---EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec----cCCCceEEEEECCCCCEEEEEcC
Confidence 67788889999999999999999999999999999999999988776642 34567999999999999999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEE---EEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTA---ISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~---l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
||.|++||+++++.+..+.+|...+.+ ....+++.+|++|+.|+ |++||+.+++.+..+..+ ...|.+++|+|+
T Consensus 213 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~p~ 290 (312)
T 4ery_A 213 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH--TDVVISTACHPT 290 (312)
T ss_dssp TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCC--SSCEEEEEECSS
T ss_pred CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhcc--CCcEEEEeecCc
Confidence 999999999999999999888764332 33346789999999998 999999999988888766 678999999999
Q ss_pred CCEEEEEe--Cc--EEEEEe
Q 010669 454 GSYLAVAS--AD--IRVYQV 469 (504)
Q Consensus 454 g~~l~~~~--~d--i~vw~~ 469 (504)
++++++++ .| |++|+.
T Consensus 291 ~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 291 ENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SSEEEEEECTTTCCEEEEEC
T ss_pred CCceEEEEccCCccEEEecC
Confidence 99999987 35 999986
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-35 Score=291.26 Aligned_cols=260 Identities=20% Similarity=0.335 Sum_probs=220.2
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCC--CCceEEEcccCccceeEEEEeeC--CCEEEEEeCCCcEEEEe
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRP--SGQIVTTLSGHSKKVTSVKFVTE--GDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~s~dg~i~iwd 293 (504)
...+|...|++++|+|++++|++|+.||.|++||+. +++.+..+.+|...|++++|+++ +++|++|+.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 456799999999999999999999999999999997 56778889999999999999976 89999999999999999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC----
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP---- 367 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---- 367 (504)
+.++ .......+..|...|.+++|+|+ +++|++++.||.|++||++++....... ...|...|.+++|+|
T Consensus 86 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 86 EENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII---IDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE---EECCTTCEEEEEECCCC--
T ss_pred cCCC-ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE---ecCCCCceEEEEEcCcccc
Confidence 9874 22366777889999999999999 9999999999999999999874332222 125678899999999
Q ss_pred ---------CCCEEEEEeCCCcEEEEEcCCCc----eeeeeeCCCCCeEEEEEcCC---CcEEEEEeCCc-EEEEEcCCC
Q 010669 368 ---------DGLILGTGTSEALVKIWDVKSQA----NVAKFDGHVGAVTAISFSEN---GYYLATAAHDG-VKLWDLRKL 430 (504)
Q Consensus 368 ---------dg~~l~~g~~dg~I~iwd~~~~~----~~~~~~~~~~~i~~l~~s~~---g~~l~s~~~d~-v~vwd~~~~ 430 (504)
++.+|++|+.||.|++||++++. ....+.+|...|++++|+|+ +.+|++++.|+ |++||++++
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 69999999999999999998764 44677889999999999999 89999999998 999999986
Q ss_pred cc---eeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEc
Q 010669 431 KN---FRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 431 ~~---~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~ 482 (504)
.. ...+....+...+.+++|+|+|++|++++.| +++|++... ..|..+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~ 297 (379)
T 3jrp_A 242 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE-GKWEPAGEV 297 (379)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET-TEEEEEEEE
T ss_pred CccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC-Cccccccce
Confidence 52 2223333346789999999999999999988 999999643 345554444
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.7e-35 Score=320.51 Aligned_cols=268 Identities=16% Similarity=0.264 Sum_probs=245.5
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|++++|+|++++|++|+.||.|++||+.++
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eEEEEeecCCCCCCCCCeEEEEECC-CCCEEEEE
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG-ICLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTG 375 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g 375 (504)
.....+.+|.+.|.+++|+|++++|++++.||.|++||++++ .....+. +|...+.+++|+| ++..|+++
T Consensus 88 ---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 88 ---EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-----GHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp ---CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-----CCSSCEEEEEEETTEEEEEEEE
T ss_pred ---cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-----CCCCcEEEEEEEcCCCCEEEEE
Confidence 677788899999999999999999999999999999999987 4555554 6778899999999 89999999
Q ss_pred eCCCcEEEEEcCCCceeeeeeCCC-CCeEEEEEcC--CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEEC
Q 010669 376 TSEALVKIWDVKSQANVAKFDGHV-GAVTAISFSE--NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD 451 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~~~~-~~i~~l~~s~--~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~ 451 (504)
+.||.|++||++++.....+..+. ..+.+++|+| ++.+|++++.++ |++||+++++.+..+..+ ...|.+++|+
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~ 237 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFH 237 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC--SSCEEEEEEC
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEc
Confidence 999999999999888877776655 8999999999 999999999998 999999999988888765 6789999999
Q ss_pred CCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 452 HSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 452 ~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
|++++|++++.| +++|++ .+++.+..+..| ...+.+++++|+|+
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~----~~~~~~~~~~~~--~~~v~~~~~~~~~~ 283 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNS----STYKVEKTLNVG--LERSWCIATHPTGR 283 (814)
T ss_dssp SSSSEEEEEETTSCEEEEET----TTCSEEEEECCS--SSSEEEEEECTTCG
T ss_pred CCCCEEEEEeCCCeEEEEEC----CCCcEEEEeecC--CCcEEEEEEccCCC
Confidence 999999999988 999998 678889999888 78999999999986
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-36 Score=299.02 Aligned_cols=250 Identities=18% Similarity=0.305 Sum_probs=219.3
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC----CceEEEcccCccceeEEEEeeC-CCEEEEEeCCCcEEEEeCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS----GQIVTTLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~ 295 (504)
.|...|.+++|+|++++|++|+.||.|++||+.+ .+.+..+.+|...|++++|+|+ +++|++++.||.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 4778999999999999999999999999999987 4588899999999999999998 8899999999999999998
Q ss_pred CCC------CcceeEEeccCCcCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeEEEEeecCC-CCCCCCCeEEEEECC
Q 010669 296 EDG------NYDCKHTLKDHTAEVQAVTVHAT-NKYFVTASLDNTWCFYDLSSGICLTQVSDAG-TDGRPEGYTSAAFHP 367 (504)
Q Consensus 296 ~~~------~~~~~~~~~~h~~~v~~l~~~p~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p 367 (504)
+.. .......+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.... ..+|...+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 753 22222334679999999999998 7899999999999999999999887775321 112367899999999
Q ss_pred CC-CEEEEEeCCC---cEEEEEcCCC-ceeeeee-CCCCCeEEEEEcC-CCcEEEEEeCCc-EEEEEcCCCcceeeeecC
Q 010669 368 DG-LILGTGTSEA---LVKIWDVKSQ-ANVAKFD-GHVGAVTAISFSE-NGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 368 dg-~~l~~g~~dg---~I~iwd~~~~-~~~~~~~-~~~~~i~~l~~s~-~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~ 439 (504)
++ .++++++.|+ .|++||++++ .++..+. +|...|++++|+| ++.+|++++.|+ |++||+++++.+..+..+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 87 6999999998 9999999986 6777787 8999999999999 999999999998 999999999998888776
Q ss_pred CCCCCeeEEEECCCC-CEEEEEeCc--EEEEEeecc
Q 010669 440 DSETPTNSVDFDHSG-SYLAVASAD--IRVYQVASV 472 (504)
Q Consensus 440 ~~~~~v~~i~~~~~g-~~l~~~~~d--i~vw~~~~~ 472 (504)
...|.+++|+|++ .+|++++.| |++|++...
T Consensus 305 --~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 305 --GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp --SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred --CCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 6789999999999 899999988 999999553
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-34 Score=302.42 Aligned_cols=262 Identities=25% Similarity=0.432 Sum_probs=236.8
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|.+++|+|++++|++++.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++.||+|++||...
T Consensus 258 ~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-- 334 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-- 334 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--
T ss_pred EecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC--
Confidence 4568899999999999999999999999999996 4678888999999999999999999999999999999999865
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
.....+.+|...|.+++|+|+++++++++.||.|++||. +++.+..+. +|...|.+++|+|+|++|++++.|
T Consensus 335 --~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~-----~~~~~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 335 --QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-----GHSSSVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp --CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEE-----CCSSCEEEEEECTTSSCEEEEETT
T ss_pred --CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEec-----CCCCCeEEEEECCCCCEEEEEeCC
Confidence 456777899999999999999999999999999999996 455666655 677889999999999999999999
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEE
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l 457 (504)
+.|++||. +++.+..+.+|...|++++|+|++.+|++++.|+ |++||. +++.+..+..+ ...|.+++|+|++++|
T Consensus 407 ~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~--~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 407 KTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGH--SSSVRGVAFSPDGQTI 482 (577)
T ss_dssp SEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECC--SSCEEEEEECTTSCEE
T ss_pred CEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCC--CCCEEEEEEcCCCCEE
Confidence 99999995 6778888999999999999999999999999998 999996 45666777665 6789999999999999
Q ss_pred EEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 458 AVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 458 ~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
++++.| |++|+. +++++..+.+| .+.|++++|+|+|+.
T Consensus 483 as~~~d~~i~iw~~-----~~~~~~~~~~h--~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 483 ASASDDKTVKLWNR-----NGQLLQTLTGH--SSSVRGVAFSPDGQT 522 (577)
T ss_dssp EEEETTSEEEEEET-----TSCEEEEEECC--SSCEEEEEECTTSSC
T ss_pred EEEeCCCEEEEEcC-----CCCEEEEEeCC--CCCEEEEEEcCCCCE
Confidence 999998 999994 57889999999 889999999999974
No 49
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=287.93 Aligned_cols=279 Identities=13% Similarity=0.141 Sum_probs=230.2
Q ss_pred cccCCCCCeEEEEeccCCCE-EEEEeC---CCcEEEEcCCCCceEEEc-ccCccceeEEEEeeC---CCEEEEEeCCCcE
Q 010669 218 LHKTSKPGIVSLDIHYSKDV-IATGGV---DTNAVLFDRPSGQIVTTL-SGHSKKVTSVKFVTE---GDLFLTGSADKTV 289 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~-l~sg~~---dg~i~vwd~~~~~~~~~~-~~h~~~v~~l~~s~~---~~~l~s~s~dg~i 289 (504)
+..+|...|.+++|+|++.. +++|+. ||.|++||+.+++..... .+|...|.+++|+|+ +.+|++|+.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 45679999999999999965 456665 999999999988765443 378999999999998 6999999999999
Q ss_pred EEEeCCCCCCcceeEEeccCCcCeEEEEE------ccCCCEEEEEeCCCeEEEEECCCCe-EEEEeecCCCCCCCCCeEE
Q 010669 290 RVWQGSEDGNYDCKHTLKDHTAEVQAVTV------HATNKYFVTASLDNTWCFYDLSSGI-CLTQVSDAGTDGRPEGYTS 362 (504)
Q Consensus 290 ~iwd~~~~~~~~~~~~~~~h~~~v~~l~~------~p~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~ 362 (504)
++||+.++. .....+.+|...|.++.| +|++++|++++.||.|++||++++. ....+... ...+...+.+
T Consensus 93 ~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~ 169 (357)
T 3i2n_A 93 HIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV-QGENKRDCWT 169 (357)
T ss_dssp EEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC-TTSCCCCEEE
T ss_pred EEEeCCCCC--ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc-CCCCCCceEE
Confidence 999998763 267778899999999954 6789999999999999999999886 55555421 1122447888
Q ss_pred EE----ECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcC---CCcEEEEEeCCc-EEEEEcCCCccee
Q 010669 363 AA----FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE---NGYYLATAAHDG-VKLWDLRKLKNFR 434 (504)
Q Consensus 363 ~~----~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~---~g~~l~s~~~d~-v~vwd~~~~~~~~ 434 (504)
++ |+|++.+|++|+.||.|++||+++++.... ..|...|.+++|+| ++.+|++++.++ |++||+++++...
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 88 788999999999999999999999887544 55888999999999 999999999998 9999999887766
Q ss_pred eeec---CCCCCCeeEEEECCCCC-EEEEEeCc--EEEEEeeccCc---------------cceeEEEccCCCCCCceeE
Q 010669 435 SFES---SDSETPTNSVDFDHSGS-YLAVASAD--IRVYQVASVKA---------------DWNCIKTFPDLSGTGAASF 493 (504)
Q Consensus 435 ~~~~---~~~~~~v~~i~~~~~g~-~l~~~~~d--i~vw~~~~~~~---------------~~~~i~~~~~h~~~~~v~~ 493 (504)
.+.. ..+...|.+++|+|++. +|++++.| |++|++..... ++..+..+.+| .+.|++
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~v~~ 326 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS--TQPISS 326 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC--SSCEEE
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC--CCCeeE
Confidence 5541 13378999999999998 89999988 99999965322 23678889998 889999
Q ss_pred EEEeecCcc
Q 010669 494 LFLFVLGQT 502 (504)
Q Consensus 494 l~~~~~g~~ 502 (504)
++|+|+|+.
T Consensus 327 ~~~s~~~~~ 335 (357)
T 3i2n_A 327 LDWSPDKRG 335 (357)
T ss_dssp EEECSSSTT
T ss_pred EEEcCCCCe
Confidence 999999974
No 50
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=297.52 Aligned_cols=248 Identities=20% Similarity=0.373 Sum_probs=203.7
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc-----------eEEEcccCc------------cceeEEEEeeCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ-----------IVTTLSGHS------------KKVTSVKFVTEG 277 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~-----------~~~~~~~h~------------~~v~~l~~s~~~ 277 (504)
.+.+.|++++|+|+|++|++|+.||.|+|||+.+++ ....+.+|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 356789999999999999999999999999998776 578888998 889999999988
Q ss_pred --CEEEEEeCCCcEEEEeCCCCCCc------------------------------------ceeEE-eccCCcCeEEEEE
Q 010669 278 --DLFLTGSADKTVRVWQGSEDGNY------------------------------------DCKHT-LKDHTAEVQAVTV 318 (504)
Q Consensus 278 --~~l~s~s~dg~i~iwd~~~~~~~------------------------------------~~~~~-~~~h~~~v~~l~~ 318 (504)
.+|++++.||+|++||+...... .+... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 78999999999999998652110 00112 3579999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEECCC-CeEEEEee--cCCCCCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCce---
Q 010669 319 HATNKYFVTASLDNTWCFYDLSS-GICLTQVS--DAGTDGRPEGYTSAAFHPDG-LILGTGTSEALVKIWDVKSQAN--- 391 (504)
Q Consensus 319 ~p~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~--~~~~~~~~~~v~~~~~~pdg-~~l~~g~~dg~I~iwd~~~~~~--- 391 (504)
+|++++|++| .||.|++||+++ +.....+. .....+|...|.+++|+|++ .+|++|+.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999994 33433321 11123677889999999998 9999999999999999999886
Q ss_pred -eeeeeCCCC------------CeEEEEEcCCCcEEEEEeCCc-EEEEEcCC-CcceeeeecCCCCC-------------
Q 010669 392 -VAKFDGHVG------------AVTAISFSENGYYLATAAHDG-VKLWDLRK-LKNFRSFESSDSET------------- 443 (504)
Q Consensus 392 -~~~~~~~~~------------~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~-~~~~~~~~~~~~~~------------- 443 (504)
+..+.+|.. .|.+++|+|+|.+|++++. + |++||+++ ++.+..+..+....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 778888775 8999999999999999999 7 99999997 78888777653111
Q ss_pred CeeEEEECCCCCEEEEEeCc--EEEEEee
Q 010669 444 PTNSVDFDHSGSYLAVASAD--IRVYQVA 470 (504)
Q Consensus 444 ~v~~i~~~~~g~~l~~~~~d--i~vw~~~ 470 (504)
.+..++|+|++++|++|+.| |++||+.
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 13349999999999999998 9999983
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.4e-34 Score=286.51 Aligned_cols=268 Identities=16% Similarity=0.277 Sum_probs=225.8
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
.+....|++++++|++|+.||.|++||+.+++....+.+|.+.|++++|+|++++|++|+.||+|++||+.++ ....
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~ 175 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG---SNPR 175 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CCCE
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC---cCce
Confidence 3445578999999999999999999999999999999999999999999999999999999999999999876 5667
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCC---------------------CCeEEE
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP---------------------EGYTSA 363 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------------------~~v~~~ 363 (504)
.+.+|...|.+++|+|++++|++++.||.|++||+++++....+.... .+. ..+.++
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKE--NPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTT--BTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCC--CCCCCccEEEEecCCcceeeecccCcccce
Confidence 788999999999999999999999999999999999999888775321 222 344555
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCceeeeee-CCCCCeEEEEEcCCCc-EEEEEeCCc-EEEEEcCCCcc-eeeeecC
Q 010669 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY-YLATAAHDG-VKLWDLRKLKN-FRSFESS 439 (504)
Q Consensus 364 ~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~-~~~~~i~~l~~s~~g~-~l~s~~~d~-v~vwd~~~~~~-~~~~~~~ 439 (504)
+|+|++++|++|+.||.|++||+++++.+..+. .|...|++++|+|++. +|++|+.|+ |++||+++++. +..+..+
T Consensus 254 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 254 EFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp CSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES
T ss_pred EEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc
Confidence 668999999999999999999999998777765 4788999999999998 999999998 99999998754 6666653
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCcc-----ceeEEEccCCCCCCceeEEEEeecCc
Q 010669 440 DSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKAD-----WNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 440 ~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~-----~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
+...+.++.| +++.+|++++.| +++|++...... ......+.+| .+.|.+++|+|+|+
T Consensus 334 -~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 334 -EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSN--DDAVSQFCYVSDDE 398 (420)
T ss_dssp -TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCS--SCCCCEEEEECCSS
T ss_pred -CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccC--CcceEEEEEccCCC
Confidence 2567888855 578899999988 999999553221 1222234456 78999999999998
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-35 Score=294.62 Aligned_cols=244 Identities=22% Similarity=0.425 Sum_probs=211.0
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC-------ceEEEcccCccceeEEEEeeC-CCEEEEEeCCCcEE
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG-------QIVTTLSGHSKKVTSVKFVTE-GDLFLTGSADKTVR 290 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~s~~-~~~l~s~s~dg~i~ 290 (504)
...|...|.+++|+|+|++|++|+.|+.+++|++.+. .....+.+|.+.|.++.|+|+ +..|++|+.|++|+
T Consensus 104 ~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~ 183 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCV 183 (380)
T ss_dssp EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEE
T ss_pred EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEE
Confidence 4568889999999999999999999999999998643 234567899999999999996 45799999999999
Q ss_pred EEeCCCCCCcceeEEe-----ccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCCCCCCeEEE
Q 010669 291 VWQGSEDGNYDCKHTL-----KDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSS-GICLTQVSDAGTDGRPEGYTSA 363 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~-----~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~ 363 (504)
+||+.++ ..+..+ .+|...|.++.|++ ++++|++|+.||+|++||++. +..+..+. +|...|.++
T Consensus 184 ~wd~~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-----~h~~~v~~v 255 (380)
T 3iz6_a 184 LWDVTTG---QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-----GHEGDINSV 255 (380)
T ss_dssp EECTTTC---CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-----CCSSCCCEE
T ss_pred EEEcCCC---cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-----CcCCCeEEE
Confidence 9999886 445444 57999999999987 789999999999999999984 45555554 788899999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC-------CCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceee
Q 010669 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV-------GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435 (504)
Q Consensus 364 ~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-------~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~ 435 (504)
+|+|++.+|++|+.||.|++||+++++.+..+..+. ..|++++|+|+|.+|++|+.|+ |++||+.+++.+..
T Consensus 256 ~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~ 335 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLN 335 (380)
T ss_dssp EECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEE
T ss_pred EEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEE
Confidence 999999999999999999999999998888776432 2489999999999999999998 99999998887766
Q ss_pred eec--CCCCCCeeEEEECCCCCEEEEEeCc--EEEEEee
Q 010669 436 FES--SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVA 470 (504)
Q Consensus 436 ~~~--~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~ 470 (504)
+.. ..|...|.+++|+|+|.+|++|+.| |+||++.
T Consensus 336 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 336 LGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp ECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred EecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 632 2347889999999999999999999 9999983
No 53
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-34 Score=282.26 Aligned_cols=266 Identities=13% Similarity=0.140 Sum_probs=227.6
Q ss_pred ccccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc---eEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEE
Q 010669 217 PLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ---IVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVW 292 (504)
Q Consensus 217 ~~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iw 292 (504)
.+..+|.+.|++++|+|++++|++|+.||.|++|++.++. ....+.+|...|++++|+|+++ +|++|+.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456899999999999999999999999999999998776 3455568999999999999999 99999999999999
Q ss_pred eC-CCCCCcceeEEecc--CCcCeEEEEEccCCCEEEEEeCCCeEEEEECCC---------CeEEEEeecCCCCCCCCCe
Q 010669 293 QG-SEDGNYDCKHTLKD--HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS---------GICLTQVSDAGTDGRPEGY 360 (504)
Q Consensus 293 d~-~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~v 360 (504)
|+ ..+ ....+.+ |...|.+++|+| +++|++++.||.|++||+++ ++.+..+ .+...+
T Consensus 85 d~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~~v 153 (342)
T 1yfq_A 85 DLIGSP----SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT------KVKNKI 153 (342)
T ss_dssp CSSSSS----SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS------SSCCCE
T ss_pred EeccCC----ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE------eeCCce
Confidence 99 764 3366778 999999999999 99999999999999999986 4433322 356789
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCC-Cce--eeeeeCCCCCeEEEEEcC-CCcEEEEEeCCc-EEEEEcCCC-----
Q 010669 361 TSAAFHPDGLILGTGTSEALVKIWDVKS-QAN--VAKFDGHVGAVTAISFSE-NGYYLATAAHDG-VKLWDLRKL----- 430 (504)
Q Consensus 361 ~~~~~~pdg~~l~~g~~dg~I~iwd~~~-~~~--~~~~~~~~~~i~~l~~s~-~g~~l~s~~~d~-v~vwd~~~~----- 430 (504)
.+++|+|++ +++++.||.|++||+++ +.. ......|...|.+++|+| ++.+|++++.++ |++||++..
T Consensus 154 ~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 154 FTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred EEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 999999987 99999999999999988 543 334456888999999999 999999999998 999999887
Q ss_pred -cceeeeecCCC-------CCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecC
Q 010669 431 -KNFRSFESSDS-------ETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLG 500 (504)
Q Consensus 431 -~~~~~~~~~~~-------~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g 500 (504)
+....+..+.. ...|.+++|+|++++|++++.| |++||+ .+++.+..+.+| +.+.|++++ ++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~----~~~~~~~~~~~~-h~~~v~~~~--~~~ 304 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL----QTRKKIKNFAKF-NEDSVVKIA--CSD 304 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET----TTTEEEEECCCC-SSSEEEEEE--ECS
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC----ccHhHhhhhhcc-cCCCceEec--CCC
Confidence 66777766532 3489999999999999999988 999998 678889999886 367899998 887
Q ss_pred cc
Q 010669 501 QT 502 (504)
Q Consensus 501 ~~ 502 (504)
+.
T Consensus 305 ~~ 306 (342)
T 1yfq_A 305 NI 306 (342)
T ss_dssp SE
T ss_pred Ce
Confidence 64
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-35 Score=298.43 Aligned_cols=272 Identities=17% Similarity=0.168 Sum_probs=215.0
Q ss_pred cCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCCCce--EEEcccCccceeEEEEee-CCCEEEEEeCCCcEEEEeCC
Q 010669 220 KTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPSGQI--VTTLSGHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 220 ~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~l~~s~-~~~~l~s~s~dg~i~iwd~~ 295 (504)
..|...|+||+|+| ++++||+|+.||.|+|||+.+++. ...+.+|.+.|++|+|+| ++++|++|+.||+|++||+.
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 45778899999999 567999999999999999987654 445678999999999998 68899999999999999997
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC-EEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL-ILGT 374 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~-~l~~ 374 (504)
+. ..........+...+.+++|+|++++|++|+.||.|++||++.. .+..+ .+|...|.+++|+|++. +|++
T Consensus 196 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~-----~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 196 GN-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL-----RMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp SC-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS-----BCCSSCEEEEEECTTCSSEEEE
T ss_pred CC-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE-----ecccceEEeeeecCCCceEEEE
Confidence 63 11112222234456789999999999999999999999999754 33333 37888999999999875 7889
Q ss_pred EeCCCcEEEEEcCCCceeee---eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCC----CCee
Q 010669 375 GTSEALVKIWDVKSQANVAK---FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSE----TPTN 446 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~---~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~----~~v~ 446 (504)
|+.||.|++||+++.+.... ..+|...|++++|+|+|.+|++++.|+ |++||++++.....+..+.+. ..+.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 99999999999988765433 357899999999999999999999998 999999998877766544321 1234
Q ss_pred EEEECCCCCEEEEEeC-----------c---EEEEEeeccCccceeEEEccCCCCCCceeEE-EEeecCccc
Q 010669 447 SVDFDHSGSYLAVASA-----------D---IRVYQVASVKADWNCIKTFPDLSGTGAASFL-FLFVLGQTC 503 (504)
Q Consensus 447 ~i~~~~~g~~l~~~~~-----------d---i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l-~~~~~g~~~ 503 (504)
...|+|++.++++++. + |++|+. .+++.+..+.++ +...|.++ +|+|+|++.
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~----~~g~~~~~l~~~-~~~~v~s~~~fspdg~~l 415 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG----NSGKMMCQLYDP-ESSGISSLNEFNPMGDTL 415 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECS----SSCCEEEEECCS-SCCCCCCEEEECTTSSCE
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEEC----CCCcEEEEEeCC-CCCcEEEEEEECCCCCEE
Confidence 5677777777776642 2 899998 667778776543 26778887 689998753
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.3e-35 Score=310.76 Aligned_cols=245 Identities=23% Similarity=0.391 Sum_probs=214.8
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|.+++|+|++++|++|+.||.|++||+.++..+..+.+|...|.+++|+|++++|++|+.|++|++||.....
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~ 505 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC 505 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999986531
Q ss_pred CcceeEEeccCCcCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATN--KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~ 376 (504)
.........+|...|.+++|+|++ ..+++++.|++|++||+++++....+. +|...|++++|+|+|++|++|+
T Consensus 506 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-----~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 506 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-----GHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEE
T ss_pred ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEeCCCCEEEEEe
Confidence 111111224788999999999986 589999999999999999998887765 6788999999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCCC---------------
Q 010669 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDS--------------- 441 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~--------------- 441 (504)
.||.|++||+++++.+..+.. ...|.+++|+|++.+|+++++++|++||++++..+..+..+..
T Consensus 581 ~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK 659 (694)
T ss_dssp TTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred CCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence 999999999999998888764 4689999999999999998877799999999887776643210
Q ss_pred --CCCeeEEEECCCCCEEEEEeCc--EEEEEe
Q 010669 442 --ETPTNSVDFDHSGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 442 --~~~v~~i~~~~~g~~l~~~~~d--i~vw~~ 469 (504)
...+++++|+|+|++|++|+.| |+||++
T Consensus 660 ~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 660 RKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp -CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred ceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 1237889999999999999999 999998
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-35 Score=296.80 Aligned_cols=258 Identities=16% Similarity=0.242 Sum_probs=211.1
Q ss_pred cccCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCC---Cc---eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEE
Q 010669 218 LHKTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPS---GQ---IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~---~~---~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~ 290 (504)
+..+|.+.|++++|+| ++++|++|+.||.|++||+.+ +. ....+ +|...|++++|+|++++|++|+.||+|+
T Consensus 58 ~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 58 LMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp ECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 4477899999999999 999999999999999999865 33 22233 4899999999999999999999999999
Q ss_pred EEeCCCCCCcceeEEec----------c--CCcCeEEEE--EccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCC
Q 010669 291 VWQGSEDGNYDCKHTLK----------D--HTAEVQAVT--VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~----------~--h~~~v~~l~--~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 356 (504)
+||+...........+. . +...+.++. +++++++|++++.||.|++||+++++.+..+... .|
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~h 213 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS---PR 213 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC---GG
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC---CC
Confidence 99985210002222221 1 456677776 5578999999999999999999999998888621 26
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeee-CCCCCeEEEEEcC----CCcEEEEEeCCc-EEEEEcCCC
Q 010669 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD-GHVGAVTAISFSE----NGYYLATAAHDG-VKLWDLRKL 430 (504)
Q Consensus 357 ~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~-~~~~~i~~l~~s~----~g~~l~s~~~d~-v~vwd~~~~ 430 (504)
...|++++|+|++.+|++|+.||.|++||+++++++..+. .|...|++++|+| ++.+|++|+.|+ |++||++++
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 7799999999999999999999999999999999988886 7888999996654 688999999999 999999999
Q ss_pred cceeeeecCC------------------------CCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccC
Q 010669 431 KNFRSFESSD------------------------SETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 431 ~~~~~~~~~~------------------------~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~ 484 (504)
+.+..+..+. +...|.+++|+ ++.+|++|+.| |++|++ .+++.+..+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~----~~~~~~~~~~~ 368 (437)
T 3gre_A 294 HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL----NELSSSKAVIS 368 (437)
T ss_dssp EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET----TCGGGCEEEEC
T ss_pred cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC----CCcccceEEec
Confidence 8877776432 34568899999 78999999988 999998 45555555554
No 57
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6e-35 Score=286.52 Aligned_cols=243 Identities=16% Similarity=0.295 Sum_probs=213.1
Q ss_pred CCCCeEEEEeccC----CCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEee-CCCEEEEEeCCCcEEEEeCCC
Q 010669 222 SKPGIVSLDIHYS----KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 222 ~~~~I~~~~~s~~----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~s~dg~i~iwd~~~ 296 (504)
|...|++++|+|+ +++|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++|+.||.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6788999999999 67999999999999999999999999999999999999999 899999999999999999987
Q ss_pred CCCcceeEEe---ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeec-----------------------
Q 010669 297 DGNYDCKHTL---KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD----------------------- 350 (504)
Q Consensus 297 ~~~~~~~~~~---~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----------------------- 350 (504)
+ .....+ .+|...|.+++|+|++++|++++.||.|++||+++++....+..
T Consensus 148 ~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 148 D---TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp T---EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred C---eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 6 555665 68999999999999999999999999999999997654322210
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce--------------eeeeeCCCCCeEEEEEcCC--CcEE
Q 010669 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN--------------VAKFDGHVGAVTAISFSEN--GYYL 414 (504)
Q Consensus 351 ~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~--------------~~~~~~~~~~i~~l~~s~~--g~~l 414 (504)
.....|...|.+++|+ +.++++++.||.|++||++++.. +..+..|...|++++|+|+ |.+|
T Consensus 225 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp EECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred ccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 0012377889999999 77999999999999999987754 7778889999999999999 9999
Q ss_pred EEEeCCc-EEEEEcCCCccee----eeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEe
Q 010669 415 ATAAHDG-VKLWDLRKLKNFR----SFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 415 ~s~~~d~-v~vwd~~~~~~~~----~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~ 469 (504)
++++.|+ |++||+.+++... .+..+.+...|.+++|+|++++|++++.| |++||+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 9999998 9999999886543 55555446899999999999999999998 999997
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-33 Score=270.96 Aligned_cols=236 Identities=18% Similarity=0.287 Sum_probs=214.6
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc--eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
.|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~- 173 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ- 173 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-
Confidence 678899999999999999999999999999999877 66778889999999999999999999999999999999875
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
.....+..|...|.+++|+|++++|++++.||.|++||+++++....+. +...+.+++|+|++.++++++.+
T Consensus 174 --~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 174 --TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD------FTSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp --EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CSSCEEEEEECTTSSEEEEEETT
T ss_pred --ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec------CCCceEEEEECCCCCEEEEEcCC
Confidence 6777888899999999999999999999999999999999998887764 34679999999999999999999
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEE
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l 457 (504)
|.|++||+++++.. .+..|...|.+++|+|++.+|++++.|+ |++||+.+++.+..... ...+.+++|+|++++|
T Consensus 246 ~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 246 SNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE---SSSVLSCDISVDDKYI 321 (337)
T ss_dssp SCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEE
T ss_pred CcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecC---CCcEEEEEECCCCCEE
Confidence 99999999887654 5677999999999999999999999998 99999999887754432 5789999999999999
Q ss_pred EEEeCc--EEEEEe
Q 010669 458 AVASAD--IRVYQV 469 (504)
Q Consensus 458 ~~~~~d--i~vw~~ 469 (504)
++++.| +++|++
T Consensus 322 ~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 322 VTGSGDKKATVYEV 335 (337)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEecCCCeEEEEEE
Confidence 999988 999997
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-33 Score=282.60 Aligned_cols=249 Identities=17% Similarity=0.253 Sum_probs=214.9
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGN 299 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 299 (504)
..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++++|++|+.||.|++||+....
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~- 207 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN- 207 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc-
Confidence 347889999999999999999999999999999999999999999999999999 56799999999999999998543
Q ss_pred cceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-CEEEEEe--
Q 010669 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-LILGTGT-- 376 (504)
Q Consensus 300 ~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-~~l~~g~-- 376 (504)
.....+.+|.+.|.+++|+|++++|++|+.||.|++||++++.....+. .|...|.+++|+|++ .++++|+
T Consensus 208 -~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 208 -HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT-----NHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC-----CCSSCCCEEEECTTSTTEEEEECCT
T ss_pred -ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec-----CCcceEEEEEECCCCCCEEEEecCC
Confidence 5677788999999999999999999999999999999999998887765 567889999999966 5666655
Q ss_pred CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe--CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA--HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~--~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
.||.|++||+++++.+..+. +...|.+++|+|++.+|++++ .++ |++||+.++..........+...|.+++|+|+
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 79999999999999988887 667899999999999999954 677 99999998766665544445789999999999
Q ss_pred CCEEEEEeCc--EEEEEeeccCccceeEEEc
Q 010669 454 GSYLAVASAD--IRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 454 g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~ 482 (504)
|.+|++++.| |++|++ ..++.+...
T Consensus 361 g~~l~s~~~dg~i~iw~~----~~~~~~~~~ 387 (401)
T 4aez_A 361 GRILSTAASDENLKFWRV----YDGDHVKRP 387 (401)
T ss_dssp SSEEEEECTTSEEEEEEC----CC-------
T ss_pred CCEEEEEeCCCcEEEEEC----CCCcccccc
Confidence 9999999998 999999 444444433
No 60
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.5e-34 Score=285.22 Aligned_cols=271 Identities=20% Similarity=0.281 Sum_probs=222.1
Q ss_pred eEEEEeccCCCE-EEEEeCCCcEEEEcCCCC----ceEEEcccCccceeEEEEee-CCCEEEEEeCCCcEEEEeCCCCCC
Q 010669 226 IVSLDIHYSKDV-IATGGVDTNAVLFDRPSG----QIVTTLSGHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQGSEDGN 299 (504)
Q Consensus 226 I~~~~~s~~~~~-l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~s~-~~~~l~s~s~dg~i~iwd~~~~~~ 299 (504)
...++++|+... +++++.||.|+||++... ..+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.+++.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 346788887654 445789999999998654 23456779999999999999 899999999999999999987532
Q ss_pred c----ceeEEeccCCcCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 300 Y----DCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 300 ~----~~~~~~~~h~~~v~~l~~~p~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
. .....+.+|...|.+++|+|++ ++|++++.||.|++||+++++....+. ...|...|.+++|+|++.+|++
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG---PDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC---TTTCCSCEEEEEECTTSSCEEE
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe---cCCCCCceEEEEECCCCCEEEE
Confidence 1 3567788999999999999998 699999999999999999999887773 1267789999999999999999
Q ss_pred EeCCCcEEEEEcCCCceeeee-eCCCCC-eEEEEEcCCCcEEEEE---eCCc-EEEEEcCCCcceeeeecCCCCCCeeEE
Q 010669 375 GTSEALVKIWDVKSQANVAKF-DGHVGA-VTAISFSENGYYLATA---AHDG-VKLWDLRKLKNFRSFESSDSETPTNSV 448 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~~-~~~~~~-i~~l~~s~~g~~l~s~---~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i 448 (504)
++.||.|++||+++++.+..+ .+|.+. +.++.|+|+|.+|++| +.++ |++||++++..........+...+.++
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 999999999999999999888 678775 8999999999999999 6777 999999987653333222335789999
Q ss_pred EECCCCCEEEEEe-Cc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 449 DFDHSGSYLAVAS-AD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 449 ~~~~~g~~l~~~~-~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|+|++++|++++ .| |++|++..... .+..+..|.+.+.|.+++|+|+|+.
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~---~~~~l~~~~~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAP---FLHYLSMFSSKESQRGMGYMPKRGL 327 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTT---CEEEEEEECCSSCCSEEEECCGGGS
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCc---ceEeecccccCCcccceEEeccccc
Confidence 9999999997654 45 99999944221 1344444433789999999999875
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.9e-35 Score=294.18 Aligned_cols=262 Identities=12% Similarity=0.191 Sum_probs=220.2
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
.+++++|+|++++|++|+.||.|++||+.+++....+..| ..+....|++++++|++|+.||.|++||+.++ ....
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~ 133 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN---LQRE 133 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC---EEEE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc---ceee
Confidence 4557899999999999999999999999887766666666 44555578899999999999999999999875 6667
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iw 384 (504)
.+.+|.+.|.+++|+|++++|++++.||.|++||+++++.+..+. +|...|.+++|+|++.+|++|+.||.|++|
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-----GHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-----CCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-----CCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 778999999999999999999999999999999999998887775 678899999999999999999999999999
Q ss_pred EcCCCceeeeeeC---CCCCeEE---------------------EEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC
Q 010669 385 DVKSQANVAKFDG---HVGAVTA---------------------ISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 385 d~~~~~~~~~~~~---~~~~i~~---------------------l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~ 439 (504)
|+++++.+..+.. |...|.+ ++|+|+|.+|++++.|+ |++||+++++....+..
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 287 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS- 287 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC-
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc-
Confidence 9999998888864 3334444 45578999999999998 99999999887776654
Q ss_pred CCCCCeeEEEECCCCC-EEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 440 DSETPTNSVDFDHSGS-YLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 440 ~~~~~v~~i~~~~~g~-~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.+...+.+++|+|++. +|++|+.| |++||+... ...+..+.+| +...|+++. +++|+
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~---~~~~~~~~~~-~~~~v~~~~-~~~~~ 347 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP---ECPVGEFLIN-EGTPINNVY-FAAGA 347 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT---TSCSEEEEES-TTSCEEEEE-EETTE
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC---cCchhhhhcc-CCCCceEEE-eCCCC
Confidence 2367899999999999 99999998 999998332 2346667664 266788884 45554
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-33 Score=280.89 Aligned_cols=258 Identities=18% Similarity=0.278 Sum_probs=221.5
Q ss_pred eEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEccc-CccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG-HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 226 I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
+.+++|++ ..+++++.||.|++||+.+++....+.. |...|++++|+|++++|++|+.||.|++||+.++ ....
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~ 170 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ---TKLR 170 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC---eEEE
Confidence 55666664 5577888999999999999988877765 8899999999999999999999999999999876 6778
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS-GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~i 383 (504)
.+.+|...|.+++| ++++|++++.||.|++||++. +.....+. +|...|.+++|+|++.+|++|+.||.|++
T Consensus 171 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 171 TMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQ-----GHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEc-----CCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 88899999999999 468999999999999999994 55555554 67789999999999999999999999999
Q ss_pred EEcCCCceeeeeeCCCCCeEEEEEcCCC-cEEEEEe--CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEE
Q 010669 384 WDVKSQANVAKFDGHVGAVTAISFSENG-YYLATAA--HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459 (504)
Q Consensus 384 wd~~~~~~~~~~~~~~~~i~~l~~s~~g-~~l~s~~--~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~ 459 (504)
||+++++.+..+..|...|.+++|+|++ .++++++ .|+ |++||+++++.+..+.. ...+.+++|+|++.++++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA---GSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSEEEE
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEEECCCCCeEEE
Confidence 9999999999999999999999999976 5666655 577 99999999998888864 468999999999999999
Q ss_pred Ee--Cc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 460 AS--AD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 460 ~~--~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
++ .| +++|++.. ........+.+| .+.|++++|+|+|+.
T Consensus 321 ~~g~~dg~i~v~~~~~--~~~~~~~~~~~h--~~~v~~~~~s~dg~~ 363 (401)
T 4aez_A 321 THGFPDNNLSIWSYSS--SGLTKQVDIPAH--DTRVLYSALSPDGRI 363 (401)
T ss_dssp EECTTTCEEEEEEEET--TEEEEEEEEECC--SSCCCEEEECTTSSE
T ss_pred EeecCCCcEEEEecCC--ccceeEEEecCC--CCCEEEEEECCCCCE
Confidence 54 55 99999943 224455567788 889999999999964
No 63
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=289.43 Aligned_cols=266 Identities=13% Similarity=0.254 Sum_probs=228.4
Q ss_pred CCeEEEEeccCCC-EEEEE----------eCCCcEEEEcCCCCc---eEEEcccCccceeEEEEeeCCCEEEEEeCCCcE
Q 010669 224 PGIVSLDIHYSKD-VIATG----------GVDTNAVLFDRPSGQ---IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTV 289 (504)
Q Consensus 224 ~~I~~~~~s~~~~-~l~sg----------~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i 289 (504)
..|.+++|+|+++ +|++| +.||.|++||+.++. .+..+ .|...|++++|+|++.+|++|+.||.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 3578999999987 99999 889999999998875 33333 588999999999999999999999999
Q ss_pred EEEeCCCCCC-cceeEEeccCCcCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCe------EEEEeecCCCCCCCCCeE
Q 010669 290 RVWQGSEDGN-YDCKHTLKDHTAEVQAVTVHAT-NKYFVTASLDNTWCFYDLSSGI------CLTQVSDAGTDGRPEGYT 361 (504)
Q Consensus 290 ~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~~p~-~~~l~s~s~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~v~ 361 (504)
++||+..... ......+.+|...|.+++|+|+ +++|++++.||.|++||+.++. ....+. ....|...+.
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~v~ 169 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG--QSMSSVDEVI 169 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC--CSCCSSCCCC
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc--cccCCCCCee
Confidence 9999987211 1467788899999999999998 8999999999999999999876 322221 1236778999
Q ss_pred EEEECCC-CCEEEEEeCCCcEEEEEcCCCceeeeeeCC------CCCeEEEEEcCCC-cEEEEEeCC----cEEEEEcCC
Q 010669 362 SAAFHPD-GLILGTGTSEALVKIWDVKSQANVAKFDGH------VGAVTAISFSENG-YYLATAAHD----GVKLWDLRK 429 (504)
Q Consensus 362 ~~~~~pd-g~~l~~g~~dg~I~iwd~~~~~~~~~~~~~------~~~i~~l~~s~~g-~~l~s~~~d----~v~vwd~~~ 429 (504)
+++|+|+ +.+|++++.||.|++||+++++.+..+..| ...|.+++|+|++ .+|++++.+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 9999998 789999999999999999999988888766 7899999999997 688988887 599999998
Q ss_pred C-cceeeee-cCCCCCCeeEEEECC-CCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecC
Q 010669 430 L-KNFRSFE-SSDSETPTNSVDFDH-SGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLG 500 (504)
Q Consensus 430 ~-~~~~~~~-~~~~~~~v~~i~~~~-~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g 500 (504)
+ .....+. .+ ...|.+++|+| ++.+|++++.| +++|++ .+++.+..+.+| .+.|++++|+|+|
T Consensus 250 ~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~----~~~~~~~~~~~~--~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 250 ANTPLQTLNQGH--QKGILSLDWCHQDEHLLLSSGRDNTVLLWNP----ESAEQLSQFPAR--GNWCFKTKFAPEA 317 (416)
T ss_dssp TTSCSBCCCSCC--SSCEEEEEECSSCSSCEEEEESSSEEEEECS----SSCCEEEEEECS--SSCCCCEEECTTC
T ss_pred CCCCcEEeecCc--cCceeEEEeCCCCCCeEEEEeCCCCEEEeeC----CCCccceeecCC--CCceEEEEECCCC
Confidence 6 4555554 33 67899999999 99999999988 999998 678889999998 8899999999998
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.5e-33 Score=280.39 Aligned_cols=250 Identities=17% Similarity=0.257 Sum_probs=216.2
Q ss_pred ccCCCCCeEEEEeccC----C---CEEEEEeCCCcEEEEcCCCCce-----EEEcccC-----ccceeEEEEe----eCC
Q 010669 219 HKTSKPGIVSLDIHYS----K---DVIATGGVDTNAVLFDRPSGQI-----VTTLSGH-----SKKVTSVKFV----TEG 277 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~----~---~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~h-----~~~v~~l~~s----~~~ 277 (504)
...|...|.+++|+|+ + ++|++++.||.|++||+.+++. +..+..| ...|.+++|+ |++
T Consensus 58 ~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 137 (397)
T 1sq9_A 58 HFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 137 (397)
T ss_dssp EECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----
T ss_pred EecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC
Confidence 3478899999999999 9 9999999999999999998886 8888888 5899999999 999
Q ss_pred CE-EEEEeCCCcEEEEeCCC------CCCcc--eeEEe-------ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q 010669 278 DL-FLTGSADKTVRVWQGSE------DGNYD--CKHTL-------KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341 (504)
Q Consensus 278 ~~-l~s~s~dg~i~iwd~~~------~~~~~--~~~~~-------~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~ 341 (504)
++ |++++.||.|++||+.. ..... ....+ ..|...|.+++|+|++ +|++++.||.|++||+++
T Consensus 138 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 138 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST 216 (397)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT
T ss_pred ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC
Confidence 99 99999999999999987 42211 11144 4488999999999999 999999999999999999
Q ss_pred CeEEEEeecCCCCCC---CCCeEEEEECCCCCEEEEEeCC---CcEEEEEcCCCceeeeeeC-------------CCCCe
Q 010669 342 GICLTQVSDAGTDGR---PEGYTSAAFHPDGLILGTGTSE---ALVKIWDVKSQANVAKFDG-------------HVGAV 402 (504)
Q Consensus 342 ~~~~~~~~~~~~~~~---~~~v~~~~~~pdg~~l~~g~~d---g~I~iwd~~~~~~~~~~~~-------------~~~~i 402 (504)
++.+..+.. ..+| ...+.+++|+|++.+|++++.| |.|++||+++++.+..+.+ |...|
T Consensus 217 ~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 294 (397)
T 1sq9_A 217 LRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV 294 (397)
T ss_dssp TEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCE
T ss_pred CceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcE
Confidence 988887762 0125 7789999999999999999999 9999999999999999988 99999
Q ss_pred EEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeee------cC-------------CCCCCeeEEEECCCC--------
Q 010669 403 TAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE------SS-------------DSETPTNSVDFDHSG-------- 454 (504)
Q Consensus 403 ~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~------~~-------------~~~~~v~~i~~~~~g-------- 454 (504)
.+++|+|++.+|++++.|+ |++||+++++.+..+. .+ .+...|.+++|+|+|
T Consensus 295 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~ 374 (397)
T 1sq9_A 295 MSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGAD 374 (397)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccc
Confidence 9999999999999999998 9999999999888887 32 015789999999998
Q ss_pred --CEEEEEeCc--EEEEEeec
Q 010669 455 --SYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 455 --~~l~~~~~d--i~vw~~~~ 471 (504)
++|++++.| |++|++..
T Consensus 375 ~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 375 LNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TSCEEEEEETTTEEEEEEEEC
T ss_pred ccceEEEecCCCcEEEEEcCC
Confidence 799999988 99999843
No 65
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=297.50 Aligned_cols=240 Identities=11% Similarity=0.056 Sum_probs=197.0
Q ss_pred CCCCeEEEEeccCC---------CEEEE-------------------EeCCCcEEEEcCCCCce----EEEcccCcccee
Q 010669 222 SKPGIVSLDIHYSK---------DVIAT-------------------GGVDTNAVLFDRPSGQI----VTTLSGHSKKVT 269 (504)
Q Consensus 222 ~~~~I~~~~~s~~~---------~~l~s-------------------g~~dg~i~vwd~~~~~~----~~~~~~h~~~v~ 269 (504)
+.+.|.+|+|+|++ ++||+ ++.||+|+||++.+++. ...+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 46788899999876 56666 45788999999987764 234667889999
Q ss_pred EEEEeeC------CCEEEEEeCCCcEEEEeCCCCCCc--------ceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEE
Q 010669 270 SVKFVTE------GDLFLTGSADKTVRVWQGSEDGNY--------DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335 (504)
Q Consensus 270 ~l~~s~~------~~~l~s~s~dg~i~iwd~~~~~~~--------~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~ 335 (504)
+++|+|+ +.+|++++.||+|++||+..+... .....+.+|...|.+++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 579999999999999999764211 123467789999999999985 5899999999999
Q ss_pred EEECCCCeE-EEEeecCCCCCCCCCeEEE--EECCCC-CEEEEEeCCCcEEEEEcCCCceeeeeeCCCC--CeEEEEEcC
Q 010669 336 FYDLSSGIC-LTQVSDAGTDGRPEGYTSA--AFHPDG-LILGTGTSEALVKIWDVKSQANVAKFDGHVG--AVTAISFSE 409 (504)
Q Consensus 336 iwd~~~~~~-~~~~~~~~~~~~~~~v~~~--~~~pdg-~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~--~i~~l~~s~ 409 (504)
+||++++.. ...+. +|...|.++ +|+|+| .+|++|+.||+|+|||+++++.+..+.+|.. .|.+++|+|
T Consensus 291 lWD~~~~~~~~~~~~-----~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQ-----VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp EEETTBCSSCSEEEE-----CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred EEECCCCCCceEEee-----cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 999997643 23333 677899999 578888 8999999999999999999888777777653 588999999
Q ss_pred CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEe
Q 010669 410 NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 410 ~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~ 469 (504)
++..|++++.|+ |++||++++.++..+..| ...|++++|+|+|++|++|+.| |++|+.
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH--~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVSR--ETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEEC--SSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeecC--CCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 999999999998 999999999888877765 6899999999999999999999 888864
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.6e-33 Score=280.75 Aligned_cols=260 Identities=20% Similarity=0.349 Sum_probs=229.8
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEee--CCCEEEEEeCCCcEEEEeCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT--EGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~s~dg~i~iwd~~~ 296 (504)
..+|...|.+++|++++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|++ ++.++++|+.||+|++||+..
T Consensus 158 ~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~ 236 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 236 (464)
T ss_dssp ECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCC
T ss_pred EeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCC
Confidence 45799999999999988 999999999999999999999999999999999999995 778999999999999999987
Q ss_pred CCCcc--------------------eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCC
Q 010669 297 DGNYD--------------------CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356 (504)
Q Consensus 297 ~~~~~--------------------~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 356 (504)
..... ....+.+|...|.++ +++++++++++.||.|++||+++++.+..+. +|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-----~~ 309 (464)
T 3v7d_B 237 ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-----GH 309 (464)
T ss_dssp CCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-----CC
T ss_pred CcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----CC
Confidence 53211 255677899989887 5679999999999999999999999888775 67
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceee
Q 010669 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435 (504)
Q Consensus 357 ~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~ 435 (504)
...|.+++|+|++.++++|+.||.|++||+++++.+..+.+|...|.++.|+ +.+|++++.|+ |++||++++.....
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence 7899999999999999999999999999999999999999999999999996 68999999998 99999998876655
Q ss_pred eecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEeeccCccceeEEE-ccCCCCCCceeEEEEe
Q 010669 436 FESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKT-FPDLSGTGAASFLFLF 497 (504)
Q Consensus 436 ~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~-~~~h~~~~~v~~l~~~ 497 (504)
... ...+..++|++++.+|++++++ +++|++ .+++.+.. +.+| .+.|.+++|.
T Consensus 388 ~~~---~~~~~~~~~~~~~~~l~~~~dg~i~iwd~----~~g~~~~~~~~~~--~~~v~~v~~~ 442 (464)
T 3v7d_B 388 YHH---TNLSAITTFYVSDNILVSGSENQFNIYNL----RSGKLVHANILKD--ADQIWSVNFK 442 (464)
T ss_dssp EEC---TTCCCEEEEEECSSEEEEEETTEEEEEET----TTCCEEESCTTTT--CSEEEEEEEE
T ss_pred ecC---CCCccEEEEEeCCCEEEEecCCeEEEEEC----CCCcEEehhhccC--CCcEEEEEec
Confidence 542 4578889999999999999966 999999 67788876 5566 7899999996
No 67
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-34 Score=277.84 Aligned_cols=257 Identities=16% Similarity=0.245 Sum_probs=204.9
Q ss_pred EeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC------Cccee
Q 010669 230 DIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG------NYDCK 303 (504)
Q Consensus 230 ~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~------~~~~~ 303 (504)
.+.+++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+..... ....+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 445678899999999999999999999888776 567888899887 9999999999999766310 11223
Q ss_pred EEec-cCCcCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCc
Q 010669 304 HTLK-DHTAEVQAVTVHA--TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380 (504)
Q Consensus 304 ~~~~-~h~~~v~~l~~~p--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~ 380 (504)
..+. +|.+.|.+++|+| +++++++++.||.|++||+++++....... .+...+.+++|+|+|.+|++|+.||.
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~----~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA----KSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC----CSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec----CCCCceEEEEECCCCCEEEEEcCCCE
Confidence 3333 6778999999999 999999999999999999999988655432 34457999999999999999999999
Q ss_pred EEEEEcCCCcee-eeeeC-CCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCC-CCCCe--eEEEECCCCC
Q 010669 381 VKIWDVKSQANV-AKFDG-HVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSD-SETPT--NSVDFDHSGS 455 (504)
Q Consensus 381 I~iwd~~~~~~~-~~~~~-~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~-~~~~v--~~i~~~~~g~ 455 (504)
|++||+++++.+ ..+.. |.++|++++|+|+|.+|++++++.|++||+++.+.+..+.... +...+ .+++|+|+|+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 999999999887 78887 9999999999999999999996669999999988766554311 12233 4699999999
Q ss_pred EEEEEeC-c--EEEEEeeccCcccee----EEEccCCCCCCceeEEEEe
Q 010669 456 YLAVASA-D--IRVYQVASVKADWNC----IKTFPDLSGTGAASFLFLF 497 (504)
Q Consensus 456 ~l~~~~~-d--i~vw~~~~~~~~~~~----i~~~~~h~~~~~v~~l~~~ 497 (504)
+|++++. + ++||++....+.|.. ...+.+| .+.+..+.+.
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 320 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSD--TADFTDMDVV 320 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC------CCCCEEEEE
T ss_pred EEEEecCCCCcEEEEEEcccccceEecCceeEecCcc--ccccceeEEE
Confidence 9999876 5 999999877777887 5666666 5566666543
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-32 Score=279.94 Aligned_cols=265 Identities=22% Similarity=0.400 Sum_probs=224.2
Q ss_pred ccCCCCC-eEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 219 HKTSKPG-IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 219 ~~~~~~~-I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
..+|... +.++.+ ++++|++|+.||.|++||+.+++.+..+.+|.+.|++++|++++ +|++|+.||+|++||+.++
T Consensus 117 l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 117 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG 193 (464)
T ss_dssp EECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT
T ss_pred EcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC
Confidence 4567666 466655 57899999999999999999999999999999999999999887 8999999999999999876
Q ss_pred CCcceeEEeccCCcCeEEEEEc--cCCCEEEEEeCCCeEEEEECCCCeEEEEeec------------------CCCCCCC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVH--ATNKYFVTASLDNTWCFYDLSSGICLTQVSD------------------AGTDGRP 357 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~--p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------------------~~~~~~~ 357 (504)
.+...+.+|.+.|.+++|+ ++++++++|+.||.|++||++++........ ....+|.
T Consensus 194 ---~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 194 ---CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp ---EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred ---cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 6788888999999999998 4778999999999999999988754321100 0012556
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeee
Q 010669 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~ 436 (504)
..+.++ ++++.++++|+.||.|++||+++++.+..+.+|...|.+++|+|++.+|++|+.|+ |++||+++++.+..+
T Consensus 271 ~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 271 ASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 667666 67789999999999999999999999999999999999999999999999999999 999999999998888
Q ss_pred ecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 437 ESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 437 ~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
..+ ...|.++.|+ +.+|++++.| +++|++ .+......+. | ...+..+.|+++|+.
T Consensus 349 ~~h--~~~v~~~~~~--~~~l~s~s~dg~v~vwd~----~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 349 QGH--TALVGLLRLS--DKFLVSAAADGSIRGWDA----NDYSRKFSYH-H--TNLSAITTFYVSDNI 405 (464)
T ss_dssp CCC--SSCEEEEEEC--SSEEEEEETTSEEEEEET----TTCCEEEEEE-C--TTCCCEEEEEECSSE
T ss_pred eCC--CCcEEEEEEc--CCEEEEEeCCCcEEEEEC----CCCceeeeec-C--CCCccEEEEEeCCCE
Confidence 765 6789999997 6899999998 999998 4444444442 3 567888899998865
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-33 Score=277.85 Aligned_cols=241 Identities=21% Similarity=0.290 Sum_probs=214.7
Q ss_pred CCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCc-
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY- 300 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~- 300 (504)
|...|++++|+|++++|++|+.||.|++|| .+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++...
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 677999999999999999999999999999 678888999999999999999999999999999999999998653210
Q ss_pred ----------------------------------------------------ceeEEeccCCcCeEEEEEccCCCEEEEE
Q 010669 301 ----------------------------------------------------DCKHTLKDHTAEVQAVTVHATNKYFVTA 328 (504)
Q Consensus 301 ----------------------------------------------------~~~~~~~~h~~~v~~l~~~p~~~~l~s~ 328 (504)
.....+..|...|.+++|+|++++|+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 1123455788899999999999999999
Q ss_pred eCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEc
Q 010669 329 SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408 (504)
Q Consensus 329 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s 408 (504)
+.||.|++||+++++....+. .|...+.+++|+|++ ++++++.||.|++||+++++.+..+..|...|.+++|+
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFY-----GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEEC-----CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred cCCCEEEEEECCCCccceEec-----CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 999999999999988777764 567889999999999 99999999999999999999999999999999999999
Q ss_pred CCCcEEEEEeCCc-EEEEEcCCCc--------------------ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EE
Q 010669 409 ENGYYLATAAHDG-VKLWDLRKLK--------------------NFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IR 465 (504)
Q Consensus 409 ~~g~~l~s~~~d~-v~vwd~~~~~--------------------~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~ 465 (504)
|++.+|++++.|+ |++||++++. .+..+..+.....|.+++|+|++++|++++.| |+
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGS 419 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCE
T ss_pred CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEE
Confidence 9999999999998 9999999887 67777665211289999999999999999988 99
Q ss_pred EEEe
Q 010669 466 VYQV 469 (504)
Q Consensus 466 vw~~ 469 (504)
+|++
T Consensus 420 iw~~ 423 (425)
T 1r5m_A 420 VVAI 423 (425)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9997
No 70
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=274.84 Aligned_cols=240 Identities=19% Similarity=0.249 Sum_probs=205.9
Q ss_pred CCCCCeEEEEeccC---CCEEEEEeCCCcEEEEcCCCCc-eEEEcccCccceeEEEE------eeCCCEEEEEeCCCcEE
Q 010669 221 TSKPGIVSLDIHYS---KDVIATGGVDTNAVLFDRPSGQ-IVTTLSGHSKKVTSVKF------VTEGDLFLTGSADKTVR 290 (504)
Q Consensus 221 ~~~~~I~~~~~s~~---~~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~l~~------s~~~~~l~s~s~dg~i~ 290 (504)
.|..+|.+++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|...|.++.| +|++++|++++.||.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 67889999999998 6999999999999999999887 88889999999999965 67899999999999999
Q ss_pred EEeCCCCCCcceeEEeccCCc----CeEEEE----EccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEE
Q 010669 291 VWQGSEDGNYDCKHTLKDHTA----EVQAVT----VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~~h~~----~v~~l~----~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 362 (504)
+||+..+. .....+..|.+ .|.++. |+|+++++++++.||.|++||+++++..... .+...+.+
T Consensus 143 vwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------~~~~~v~~ 214 (357)
T 3i2n_A 143 VWDPRQKD--DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET------NIKNGVCS 214 (357)
T ss_dssp EECTTSCS--SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE------ECSSCEEE
T ss_pred EEeCCCCC--CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec------CCCCceEE
Confidence 99998753 24555555444 899998 7889999999999999999999999875544 45578999
Q ss_pred EEECC---CCCEEEEEeCCCcEEEEEcCCCceeeeee-----CCCCCeEEEEEcCCCc-EEEEEeCCc-EEEEEcCCCc-
Q 010669 363 AAFHP---DGLILGTGTSEALVKIWDVKSQANVAKFD-----GHVGAVTAISFSENGY-YLATAAHDG-VKLWDLRKLK- 431 (504)
Q Consensus 363 ~~~~p---dg~~l~~g~~dg~I~iwd~~~~~~~~~~~-----~~~~~i~~l~~s~~g~-~l~s~~~d~-v~vwd~~~~~- 431 (504)
++|+| ++.+|++|+.||.|++||+++++.+..+. +|...|++++|+|++. +|++++.|+ |++||++.+.
T Consensus 215 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 215 LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 99999 99999999999999999999877665554 8999999999999998 899999998 9999998643
Q ss_pred ------------------ceeeeecCCCCCCeeEEEECCCCCEEE-EEeCc--EEEEEee
Q 010669 432 ------------------NFRSFESSDSETPTNSVDFDHSGSYLA-VASAD--IRVYQVA 470 (504)
Q Consensus 432 ------------------~~~~~~~~~~~~~v~~i~~~~~g~~l~-~~~~d--i~vw~~~ 470 (504)
.+..+..+ ...|.+++|+|+|++|+ +++.| ++||++.
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 295 RSKKDSEGIEMGVAGSVSLLQNVTLS--TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp C--CCTTSCCCCCCCEEEEEEEEECC--SSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cccccCCCCccccccccceeeccccC--CCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 33444444 67899999999999998 78887 9999993
No 71
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.9e-32 Score=263.91 Aligned_cols=246 Identities=22% Similarity=0.372 Sum_probs=214.6
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|.+++|+|++++|++|+.||.|++|+............+...+..+.+++++.+|++|+.|+.+++||.....
T Consensus 82 l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~ 161 (340)
T 4aow_A 82 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 161 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE
T ss_pred EeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc
Confidence 46789999999999999999999999999999999998888888899999999999999999999999999999987642
Q ss_pred CcceeEEeccCCcCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATN--KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~ 376 (504)
.......+|...+..++|++++ .++++++.|+.|++||+++++....+. +|...|++++|+|++++|++|+
T Consensus 162 --~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 162 --KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp --EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEE
T ss_pred --eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEe
Confidence 3444556899999999998865 578899999999999999999888775 6778999999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeec-------CCCCCCeeEEE
Q 010669 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFES-------SDSETPTNSVD 449 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~-------~~~~~~v~~i~ 449 (504)
.||.|++||+++.+.+..+..+ ..|.++.|+|++.+++++.++.|++||++++..+..+.. ..+...|++++
T Consensus 235 ~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 313 (340)
T 4aow_A 235 KDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 313 (340)
T ss_dssp TTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEE
T ss_pred CCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEE
Confidence 9999999999999999888854 689999999998877666544499999998776655542 23467899999
Q ss_pred ECCCCCEEEEEeCc--EEEEEeecc
Q 010669 450 FDHSGSYLAVASAD--IRVYQVASV 472 (504)
Q Consensus 450 ~~~~g~~l~~~~~d--i~vw~~~~~ 472 (504)
|+|+|++|++|+.| |+||++.++
T Consensus 314 ~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 314 WSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 99999999999999 999999553
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-33 Score=280.99 Aligned_cols=247 Identities=19% Similarity=0.292 Sum_probs=212.2
Q ss_pred cccCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCCC-------ceEEEcccCccceeEEEEeeCC-CEEEEEeCCCc
Q 010669 218 LHKTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPSG-------QIVTTLSGHSKKVTSVKFVTEG-DLFLTGSADKT 288 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~s~~~-~~l~s~s~dg~ 288 (504)
...+|...|++++|+| ++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|++ ++|++|+.||.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 3567899999999999 8999999999999999999887 5678889999999999999998 69999999999
Q ss_pred EEEEeCCCCCCcceeEEe--ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCC-CeEEEEE
Q 010669 289 VRVWQGSEDGNYDCKHTL--KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE-GYTSAAF 365 (504)
Q Consensus 289 i~iwd~~~~~~~~~~~~~--~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~ 365 (504)
|++||+.++ .....+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+.. .|.. .+.++.|
T Consensus 156 i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~ 228 (402)
T 2aq5_A 156 ILVWDVGTG---AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR----PHEGTRPVHAVF 228 (402)
T ss_dssp EEEEETTTT---EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC----SSCSSSCCEEEE
T ss_pred EEEEECCCC---CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc----CCCCCcceEEEE
Confidence 999999876 677777 78999999999999999999999999999999999998887731 3333 4899999
Q ss_pred CCCCCEEEEE---eCCCcEEEEEcCCCce-eeeee-CCCCCeEEEEEcCCCcEEEE-EeCCc-EEEEEcCCCcc-eeeee
Q 010669 366 HPDGLILGTG---TSEALVKIWDVKSQAN-VAKFD-GHVGAVTAISFSENGYYLAT-AAHDG-VKLWDLRKLKN-FRSFE 437 (504)
Q Consensus 366 ~pdg~~l~~g---~~dg~I~iwd~~~~~~-~~~~~-~~~~~i~~l~~s~~g~~l~s-~~~d~-v~vwd~~~~~~-~~~~~ 437 (504)
+|++.+|++| +.|+.|++||+++++. +.... .|...+.+++|+|++.+|++ |+.|+ |++||+.+++. +..+.
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 9999999999 7999999999998764 33332 46778999999999999875 44677 99999998875 55555
Q ss_pred cCCCCCCeeEEEECCCCCEEEEEeCcEEEEEeec
Q 010669 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVAS 471 (504)
Q Consensus 438 ~~~~~~~v~~i~~~~~g~~l~~~~~di~vw~~~~ 471 (504)
.+.+...+.+++|+|++.++++++..+++|++..
T Consensus 309 ~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 309 MFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHE 342 (402)
T ss_dssp EECCSSCCSEEEECCGGGSCGGGTEEEEEEEEET
T ss_pred ccccCCcccceEEecccccceecceeEEEEEcCC
Confidence 5545688999999999999886544499999954
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.2e-33 Score=315.00 Aligned_cols=269 Identities=18% Similarity=0.305 Sum_probs=243.7
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+|...|++++|+|+|++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++|+.||+|++||+.++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~- 689 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG- 689 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred CcceeEEeccCCcCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHA--TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~ 376 (504)
..+..+.+|...|.+++|+| ++.++++|+.||.|++||++++.....+. +|...|++++|+|++.++++|+
T Consensus 690 --~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 690 --KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-----GHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp --CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-----CCSSCEEEEEECSSTTEEEEEE
T ss_pred --ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-----CCCCCEEEEEEecCCCEEEEEE
Confidence 67888899999999999999 45689999999999999999999888775 6788999999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeeeC-------------CCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCCCCC
Q 010669 377 SEALVKIWDVKSQANVAKFDG-------------HVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSET 443 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~~~-------------~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~~~ 443 (504)
.||.|++||+++++....+.. +...+.+++|+|+|.++++++.+.+.+||+.++.....+... +..
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~-~~~ 841 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTG-HHS 841 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECS-SSS
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCC-CCC
Confidence 999999999998877665532 233788999999999999998766999999999887777632 367
Q ss_pred CeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 444 PTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 444 ~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.+.+++|+|++.++++++.+ +++|++ .++..+..+.+| .+.|+++.|+|+|+.
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~----~~~~~~~~~~~h--~~~v~~v~~spdg~~ 896 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNI----DSRLKVADCRGH--LSWVHGVMFSPDGSS 896 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEET----TTTEEEEEECCC--SSCEEEEEECTTSSE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEc----CCCceeeecCCC--ccceEEEEECCCCCE
Confidence 89999999999999999998 999998 678889999998 889999999999863
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=272.72 Aligned_cols=272 Identities=21% Similarity=0.310 Sum_probs=222.3
Q ss_pred eccccCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCCCceEEEc-------------ccCccceeEEEEee-CCCEE
Q 010669 216 HPLHKTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPSGQIVTTL-------------SGHSKKVTSVKFVT-EGDLF 280 (504)
Q Consensus 216 ~~~~~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~-------------~~h~~~v~~l~~s~-~~~~l 280 (504)
......|.++|++++|+| ++++|++|+.||.|++||+.+++....+ .+|...|.+++|+| ++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 345667999999999999 9999999999999999999887554333 25999999999999 77899
Q ss_pred EEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCC---CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCC
Q 010669 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN---KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357 (504)
Q Consensus 281 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 357 (504)
++++.||.|++||+.++ .....+. +...+.++.|+|.+ .++++++.||.|++||+++++....+. .|.
T Consensus 116 ~s~~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-----~~~ 186 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTL---QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-----GHR 186 (408)
T ss_dssp EEEETTSEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-----CCC
T ss_pred EEEeCCCeEEEeeCCCC---ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-----CCC
Confidence 99999999999999875 4555543 77889999999854 499999999999999999998877765 577
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCc-eeeee---------------eCCCCCeEEEEEcCCCcEEEEEeCC
Q 010669 358 EGYTSAAFHPDGL-ILGTGTSEALVKIWDVKSQA-NVAKF---------------DGHVGAVTAISFSENGYYLATAAHD 420 (504)
Q Consensus 358 ~~v~~~~~~pdg~-~l~~g~~dg~I~iwd~~~~~-~~~~~---------------~~~~~~i~~l~~s~~g~~l~s~~~d 420 (504)
..|.+++|+|++. +|++|+.||.|++||++++. .+..+ .+|...|.+++|+|+|.+|++++.|
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 8999999999998 69999999999999998765 33333 5688899999999999999999999
Q ss_pred c-EEEEEcCCCcceeeeecCCC----CCCeeEEEECCCCCEEEEEeCc-EEEEEeeccCccceeEEEccCCCCCCceeEE
Q 010669 421 G-VKLWDLRKLKNFRSFESSDS----ETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFPDLSGTGAASFL 494 (504)
Q Consensus 421 ~-v~vwd~~~~~~~~~~~~~~~----~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l 494 (504)
+ |++||+++++....+..... ......+.....+.+++++... +++|++ .+++.+..+.+| .+.|+++
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~----~~~~~~~~~~~~--~~~v~~~ 340 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV----YSGEQITMLKGH--YKTVDCC 340 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET----TTCCEEEEECCC--SSCEEEE
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC----cCCcceeeeccC--CCeEEEE
Confidence 8 99999998876554433211 1122233334445555555555 999998 778899999998 8899999
Q ss_pred EEeecCcc
Q 010669 495 FLFVLGQT 502 (504)
Q Consensus 495 ~~~~~g~~ 502 (504)
+|+|+|+.
T Consensus 341 ~~s~~~~~ 348 (408)
T 4a11_B 341 VFQSNFQE 348 (408)
T ss_dssp EEETTTTE
T ss_pred EEcCCCCE
Confidence 99999864
No 75
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-33 Score=282.20 Aligned_cols=269 Identities=15% Similarity=0.109 Sum_probs=222.2
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc---eEEEccc-------------------------------------
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ---IVTTLSG------------------------------------- 263 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~------------------------------------- 263 (504)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999977666 57899999999988 6555543
Q ss_pred -----------------CccceeEEEEeeCCCEE-EEEeCCCcEEEEeCC--CCCCcceeEEec--cCCcCeEEEEEccC
Q 010669 264 -----------------HSKKVTSVKFVTEGDLF-LTGSADKTVRVWQGS--EDGNYDCKHTLK--DHTAEVQAVTVHAT 321 (504)
Q Consensus 264 -----------------h~~~v~~l~~s~~~~~l-~s~s~dg~i~iwd~~--~~~~~~~~~~~~--~h~~~v~~l~~~p~ 321 (504)
|.+.|++++|+|++++| ++|+.||.|++||+. ++ .....+. .|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK---NVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS---SCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC---ceeeeeecccCCCCceEEEEcCC
Confidence 33379999999999986 899999999999998 54 4455554 56789999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCCCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCCCceeee-ee
Q 010669 322 NKYFVTASLDNTWCFYDLSSGICLT-QVSDAGTDGRPEGYTSAAFHPD---GLILGTGTSEALVKIWDVKSQANVAK-FD 396 (504)
Q Consensus 322 ~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~pd---g~~l~~g~~dg~I~iwd~~~~~~~~~-~~ 396 (504)
+++|++|+.||.|++|++.++.... ... ...+|...|++++|+|+ +.+|++|+.|+.|++||+++++.+.. +.
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQE--PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCC--CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccce--eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 9999999999999999998876443 000 12257789999999999 99999999999999999999988877 55
Q ss_pred CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC-----------------------CCCCCeeEEEECC
Q 010669 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS-----------------------DSETPTNSVDFDH 452 (504)
Q Consensus 397 ~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~-----------------------~~~~~v~~i~~~~ 452 (504)
+|...|++++|+ +|.+|++++.|+ |++||+++++.+..+..+ .....+.+++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 899999999999 999999999998 999999999887777532 1235789999999
Q ss_pred CCCEEEEEe-Cc--EEEEEe-eccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 453 SGSYLAVAS-AD--IRVYQV-ASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 453 ~g~~l~~~~-~d--i~vw~~-~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
++++|++++ .+ |+||++ +........+..+..| +.|.+++|.+++.+
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~~~~~ 368 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP---YNVISLSAHNDEFQ 368 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS---SCEEEEEEETTEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC---CceEEEEecCCcEE
Confidence 999999998 55 999999 3323445778888875 67999999996544
No 76
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-32 Score=274.61 Aligned_cols=243 Identities=19% Similarity=0.262 Sum_probs=210.4
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGN 299 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 299 (504)
..|...|++|+|+|+|++|++|+.||.|++||+.+++.+..+.+|...+.++.| ++.+|++|+.|+.+++||.....
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~- 220 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE- 220 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccc-
Confidence 457788999999999999999999999999999999999999999999999877 57899999999999999987643
Q ss_pred cceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-CEEEE--Ee
Q 010669 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-LILGT--GT 376 (504)
Q Consensus 300 ~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-~~l~~--g~ 376 (504)
..+..+.+|...+..+.|+|+++++++++.|+.+++||..+++....... ....|...|.+++|+|++ .++++ |+
T Consensus 221 -~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~-~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 221 -HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ-TFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSE-EECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred -eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeee-eecccCCceeeeeeCCCcccEEEEEeec
Confidence 56677889999999999999999999999999999999987653211100 012567889999999954 56655 45
Q ss_pred CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe--CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA--HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~--~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
.|+.|++||+++++.+..+..| ..+.++.|++++..+++++ .|+ |++||+.+++.+..+..| ...|++++|+|+
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH--~~~V~~l~~spd 375 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH--TSRVLSLTMSPD 375 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC--SSCEEEEEECTT
T ss_pred CCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCC
Confidence 7999999999999999888855 5789999999999888775 567 999999999999988876 679999999999
Q ss_pred CCEEEEEeCc--EEEEEee
Q 010669 454 GSYLAVASAD--IRVYQVA 470 (504)
Q Consensus 454 g~~l~~~~~d--i~vw~~~ 470 (504)
|++|++|+.| |+||++.
T Consensus 376 g~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 376 GATVASAAADETLRLWRCF 394 (420)
T ss_dssp SSCEEEEETTTEEEEECCS
T ss_pred CCEEEEEecCCeEEEEECC
Confidence 9999999999 9999983
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=268.77 Aligned_cols=269 Identities=17% Similarity=0.211 Sum_probs=222.8
Q ss_pred eccccCCCCCeEEEEeccC---CCEEEEEeCCCcEEEEcCCC-CceE-EEcccCccceeEEEEeeCCCEEEEEeCCCcEE
Q 010669 216 HPLHKTSKPGIVSLDIHYS---KDVIATGGVDTNAVLFDRPS-GQIV-TTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290 (504)
Q Consensus 216 ~~~~~~~~~~I~~~~~s~~---~~~l~sg~~dg~i~vwd~~~-~~~~-~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~ 290 (504)
.....+|...|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+.+|...|++++|+|++++|++++.||.|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 3456789999999999999 59999999999999999987 5554 78889999999999999999999999999999
Q ss_pred EEeCCCCCCcceeEEeccCCcCeEEEEE--ccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC
Q 010669 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTV--HATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD 368 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~~h~~~v~~l~~--~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd 368 (504)
+||+.++ ... .+..|...|.+++| +|++++|++++.||.|++||+++++.+..+... ..+.++.+.+
T Consensus 112 iwd~~~~---~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~- 180 (368)
T 3mmy_A 112 MWDLSSN---QAI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP------ERCYCADVIY- 180 (368)
T ss_dssp EEETTTT---EEE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS------SCEEEEEEET-
T ss_pred EEEcCCC---Cce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC------CCceEEEecC-
Confidence 9999875 333 35679999999999 889999999999999999999999888777522 3566666664
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeeee--eCCCCCeEEEEEcCCCcE----EEEEeCCc-EEEEEcCCC---cceeeeec
Q 010669 369 GLILGTGTSEALVKIWDVKSQANVAKF--DGHVGAVTAISFSENGYY----LATAAHDG-VKLWDLRKL---KNFRSFES 438 (504)
Q Consensus 369 g~~l~~g~~dg~I~iwd~~~~~~~~~~--~~~~~~i~~l~~s~~g~~----l~s~~~d~-v~vwd~~~~---~~~~~~~~ 438 (504)
..+++++.++.+++||++........ ..+...+.++.+.+++.. +++++.++ |++||++.. .....+..
T Consensus 181 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 181 -PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp -TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred -CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 47888899999999999876543322 223456667776665544 99999998 999999987 44555655
Q ss_pred CCCC----------CCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 439 SDSE----------TPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 439 ~~~~----------~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+... ..|.+++|+|++++|++++.| |++||+ .+++++..+.+| .+.|++++|+|+|+.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~----~~~~~~~~~~~~--~~~v~~~~~s~~g~~ 329 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK----DARTKLKTSEQL--DQPISACCFNHNGNI 329 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET----TTTEEEEECCCC--SSCEEEEEECTTSSC
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC----CCCcEEEEecCC--CCCceEEEECCCCCe
Confidence 4211 169999999999999999998 999998 678899999998 889999999999975
No 78
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.7e-32 Score=275.34 Aligned_cols=258 Identities=21% Similarity=0.400 Sum_probs=225.7
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
.+..|..+|.++.| ++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++| ++++|++|+.||+|++||+.++
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 34567788999887 7999999999999999999999999999999999999999 7889999999999999999886
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.....+.+|...|.++.|+ ++++++|+.||.|++||++++........ ..+|...|.+++| +++++++|+.
T Consensus 204 ---~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~--~~~~l~s~~~ 274 (435)
T 1p22_A 204 ---EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDF--DDKYIVSASG 274 (435)
T ss_dssp ---CEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEE--ECCCSSCEEEEEE--ETTEEEEEET
T ss_pred ---cEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeE--ecCCCCcEEEEEe--CCCEEEEEeC
Confidence 6788888999999999997 56999999999999999998765532111 2267789999999 7889999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCE
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~ 456 (504)
||.|++||+++++.+..+.+|...|.++.| ++.+|++|+.|+ |++||+++++.+..+..+ ...|.+++| ++.+
T Consensus 275 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 275 DRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH--EELVRCIRF--DNKR 348 (435)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEC--CSSE
T ss_pred CCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCC--cCcEEEEEe--cCCE
Confidence 999999999999999999999999999999 578999999998 999999999998888765 678999999 7899
Q ss_pred EEEEeCc--EEEEEeeccCcc-----ceeEEEccCCCCCCceeEEEE
Q 010669 457 LAVASAD--IRVYQVASVKAD-----WNCIKTFPDLSGTGAASFLFL 496 (504)
Q Consensus 457 l~~~~~d--i~vw~~~~~~~~-----~~~i~~~~~h~~~~~v~~l~~ 496 (504)
|++|+.| |++||+...... ..++..+.+| .+.|++++|
T Consensus 349 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~ 393 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH--SGRVFRLQF 393 (435)
T ss_dssp EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC--SSCCCCEEE
T ss_pred EEEEeCCCcEEEEECCCCCCccccccchheeeccCC--CCCeEEEEe
Confidence 9999998 999998443211 1178889998 889999988
No 79
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.8e-33 Score=274.60 Aligned_cols=237 Identities=12% Similarity=0.140 Sum_probs=202.2
Q ss_pred cCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCCCceEEEccc---CccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 220 KTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPSGQIVTTLSG---HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 220 ~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
.+|...|.+++|+| ++++|++++.||.|++||+.+ ..+..+.. |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC
Confidence 36889999999999 789999999999999999985 55555543 44889999999999999999999999999995
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCC----CeEEEEeecCCCCCCCCCeEEEEECC-CC
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSS----GICLTQVSDAGTDGRPEGYTSAAFHP-DG 369 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~v~~~~~~p-dg 369 (504)
. .....+.+|...|.+++|+|+++ +|++++.|+.|++||+++ +.....+ +|...|.+++|+| ++
T Consensus 194 ~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~ 263 (383)
T 3ei3_B 194 G----HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM------PHEKPVNAAYFNPTDS 263 (383)
T ss_dssp S----CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE------ECSSCEEEEEECTTTS
T ss_pred C----CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe------cCCCceEEEEEcCCCC
Confidence 3 67788889999999999999999 999999999999999998 5555554 3567899999999 99
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----------------CCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc
Q 010669 370 LILGTGTSEALVKIWDVKSQANVAKFDGHV-----------------GAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431 (504)
Q Consensus 370 ~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-----------------~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~ 431 (504)
.+|++++.||.|++||+++++....+.+|. +.+..++|+|+|.+ +++.|+ |++||+.+++
T Consensus 264 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 264 TKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp CEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred CEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 999999999999999999988777666443 23444666666665 666777 9999999999
Q ss_pred ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 432 NFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 432 ~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
.+..+..+.+...+..++|+|++.+|+++++. |+||++
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~ 380 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNR 380 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEEC
T ss_pred eeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEec
Confidence 99988876556778888999999999999854 999998
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-32 Score=270.84 Aligned_cols=209 Identities=15% Similarity=0.198 Sum_probs=163.9
Q ss_pred ceeEEEEeeCCCEEEEE--eCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeE
Q 010669 267 KVTSVKFVTEGDLFLTG--SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344 (504)
Q Consensus 267 ~v~~l~~s~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~ 344 (504)
.+.+++|+|||++++++ +.|++|+|||+.+. .++..+ .|.+.|.+++|+|+|+++++++.+ .+.+|+..++..
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~---~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~ 209 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDL---TEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC 209 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTT---EEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC---cEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc
Confidence 36789999999987654 47899999999885 566666 477889999999999999999855 566777777766
Q ss_pred EEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCC----cEEEEEcCCCce----eeeeeCCCCCeEEEEEcCCCcEEEE
Q 010669 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA----LVKIWDVKSQAN----VAKFDGHVGAVTAISFSENGYYLAT 416 (504)
Q Consensus 345 ~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg----~I~iwd~~~~~~----~~~~~~~~~~i~~l~~s~~g~~l~s 416 (504)
..... ...|...+.+++|+|++.++++++.|+ .+++||+..... ...+.+|...|++++|+|+|.+|++
T Consensus 210 ~~~~~---~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 210 IARKT---DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp EEEEC---CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred eeeee---cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE
Confidence 55443 236778899999999999999999887 688899876643 3456789999999999999999999
Q ss_pred EeCCc-EEEEEcCCCcceeee-ecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeecc----CccceeEEEccCC
Q 010669 417 AAHDG-VKLWDLRKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASV----KADWNCIKTFPDL 485 (504)
Q Consensus 417 ~~~d~-v~vwd~~~~~~~~~~-~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~----~~~~~~i~~~~~h 485 (504)
|+.|+ |+|||+++++++..+ ..| ...|++++|+|||++|++|+.| |+||++... ...++.+..++.|
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~~gH--~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~~~~s~~~~l~kl~~~ 361 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFKQAH--SFAITEVTISPDSTYVASVSAANTIHIIKLPLNYANYTSMKQKISKLEHH 361 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEETTSS--SSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTTC--------------
T ss_pred EcCCCEEEEEECCCCcEEEEecCcc--cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCcCccCccccceeeecc
Confidence 99998 999999999988876 344 7899999999999999999999 999998532 1224455555544
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-32 Score=260.33 Aligned_cols=233 Identities=17% Similarity=0.232 Sum_probs=192.5
Q ss_pred EEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc--CCCEEEEEeCCCeEEE
Q 010669 259 TTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA--TNKYFVTASLDNTWCF 336 (504)
Q Consensus 259 ~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~l~s~s~dg~i~i 336 (504)
..+.+|.+.|++++|+|+|++|++|+.|++|+|||+... .......+.+|.+.|.+++|++ ++++|++|+.||+|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 457789999999999999999999999999999998752 2256778899999999999976 3899999999999999
Q ss_pred EECCCCe--EEEEeecCCCCCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCC
Q 010669 337 YDLSSGI--CLTQVSDAGTDGRPEGYTSAAFHPD--GLILGTGTSEALVKIWDVKSQA--NVAKFDGHVGAVTAISFSEN 410 (504)
Q Consensus 337 wd~~~~~--~~~~~~~~~~~~~~~~v~~~~~~pd--g~~l~~g~~dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~ 410 (504)
||++++. ....+. +|...|.+++|+|+ |.+|++|+.||.|++||++.+. ....+.+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~-----~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 82 WKEENGRWSQIAVHA-----VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEBSSSCBCCCEEEC-----CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred EEcCCCceEEEEEee-----cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 9998874 233332 67789999999997 8999999999999999998763 24567889999999999997
Q ss_pred -------------CcEEEEEeCCc-EEEEEcCCCc----ceeeeecCCCCCCeeEEEECCCC---CEEEEEeCc--EEEE
Q 010669 411 -------------GYYLATAAHDG-VKLWDLRKLK----NFRSFESSDSETPTNSVDFDHSG---SYLAVASAD--IRVY 467 (504)
Q Consensus 411 -------------g~~l~s~~~d~-v~vwd~~~~~----~~~~~~~~~~~~~v~~i~~~~~g---~~l~~~~~d--i~vw 467 (504)
+.+|++|+.|+ |++||++++. ....+..| ...|.+++|+|++ .+|++++.| |+||
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H--~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC--CCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 57999999998 9999998765 33445444 7799999999985 899999998 9999
Q ss_pred EeeccCccceeEEEc--cCCCCCCceeEEEEeecCcc
Q 010669 468 QVASVKADWNCIKTF--PDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 468 ~~~~~~~~~~~i~~~--~~h~~~~~v~~l~~~~~g~~ 502 (504)
++......+. ...+ ..| .+.|.+++|+|+|+.
T Consensus 235 d~~~~~~~~~-~~~~~~~~~--~~~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 235 TQDNEQGPWK-KTLLKEEKF--PDVLWRASWSLSGNV 268 (297)
T ss_dssp EESSTTSCCE-EEESSSSCC--SSCEEEEEECSSSCC
T ss_pred EeCCCCCccc-eeeeecccC--CCcEEEEEECCCCCE
Confidence 9954322222 2233 355 789999999999975
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=302.73 Aligned_cols=250 Identities=20% Similarity=0.332 Sum_probs=213.3
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCC--CCceEEEcccCccceeEEEEeeC--CCEEEEEeCCCcEEEEe
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRP--SGQIVTTLSGHSKKVTSVKFVTE--GDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~s~dg~i~iwd 293 (504)
+..+|.++|++++|+|++++|++|+.||.|++||+. +++.+..+.+|.+.|++++|+++ +++|++|+.||+|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 457899999999999999999999999999999987 55778889999999999999987 89999999999999999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC----
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP---- 367 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---- 367 (504)
+.++ .......+.+|...|.+++|+|+ ++++++|+.||.|++||++++....... ..+|...|.+++|+|
T Consensus 84 ~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~---~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 84 EENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII---IDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE---EECCSSCEEEEEECCCC--
T ss_pred CCCC-cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE---eecCCCceEEEEecCcccc
Confidence 9874 22367777889999999999999 9999999999999999998874332222 126778999999999
Q ss_pred ---------CCCEEEEEeCCCcEEEEEcCCC----ceeeeeeCCCCCeEEEEEcCC---CcEEEEEeCCc-EEEEEcCCC
Q 010669 368 ---------DGLILGTGTSEALVKIWDVKSQ----ANVAKFDGHVGAVTAISFSEN---GYYLATAAHDG-VKLWDLRKL 430 (504)
Q Consensus 368 ---------dg~~l~~g~~dg~I~iwd~~~~----~~~~~~~~~~~~i~~l~~s~~---g~~l~s~~~d~-v~vwd~~~~ 430 (504)
++.++++|+.||.|++||++++ .....+.+|.+.|++++|+|+ |.+|++++.|+ |++||++++
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 5899999999999999999887 456677889999999999999 99999999999 999999986
Q ss_pred cce---eeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeec
Q 010669 431 KNF---RSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 431 ~~~---~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
... .......+...|.+++|+|+|.+|++++.| |++|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 421 112223346789999999999999999988 99999853
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.2e-32 Score=269.19 Aligned_cols=246 Identities=15% Similarity=0.183 Sum_probs=209.4
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEE--EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT--TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~ 296 (504)
...|...|.+++|+|++++|++++.||.|++||+.+++... .+..|...|.+++|+|++++|++++.||.|++||+..
T Consensus 48 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC
Confidence 45788999999999999999999999999999998886544 3467999999999999999999999999999999987
Q ss_pred CCCcceeEEe-ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECC------------------CCeEEEEeecCCCCCCC
Q 010669 297 DGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS------------------SGICLTQVSDAGTDGRP 357 (504)
Q Consensus 297 ~~~~~~~~~~-~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~ 357 (504)
.........+ ..|...|.+++|+|++++|++++.||.|++||++ .++.+..+. .|.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 202 (372)
T 1k8k_C 128 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-----SSC 202 (372)
T ss_dssp TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-----CCS
T ss_pred CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-----CCC
Confidence 6432233333 5789999999999999999999999999999954 566666654 667
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCC--Cc--c
Q 010669 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK--LK--N 432 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~--~~--~ 432 (504)
..+.+++|+|++.+|++++.||.|++||+++++.+..+..|...|.+++|+|++.+|++| .|+ |++||++. +. .
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~ 281 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSF 281 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEE
T ss_pred CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEE
Confidence 889999999999999999999999999999999999999999999999999999999888 565 99999987 32 1
Q ss_pred e------------------------------------eeeecCCCCCCeeEEEEC-CCC---CEEEEEeCc--EEEEEee
Q 010669 433 F------------------------------------RSFESSDSETPTNSVDFD-HSG---SYLAVASAD--IRVYQVA 470 (504)
Q Consensus 433 ~------------------------------------~~~~~~~~~~~v~~i~~~-~~g---~~l~~~~~d--i~vw~~~ 470 (504)
+ ..+. ..|...|++++|. ++| .+|++|+.| |++|++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 282 GGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CCCCCCC--------CHHHHHHHCCCCC---------CCCS-SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred eeccCccccchhhhcchhhhhhhcccccccccCcccccccc-ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 0 1111 1347799999966 676 999999999 9999984
Q ss_pred c
Q 010669 471 S 471 (504)
Q Consensus 471 ~ 471 (504)
.
T Consensus 361 ~ 361 (372)
T 1k8k_C 361 S 361 (372)
T ss_dssp H
T ss_pred C
Confidence 3
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.3e-32 Score=271.32 Aligned_cols=257 Identities=19% Similarity=0.323 Sum_probs=221.0
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEc--ccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTL--SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
.++.|+||++ ++|++|. |++|+|||..+++....+ .+|...|++|+|+|+|++|++|+.||+|++||+.++ ..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~---~~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---KR 181 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC---cE
Confidence 3568999974 6888775 899999999999887765 467888999999999999999999999999999886 77
Q ss_pred eEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEE-EEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010669 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL-TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I 381 (504)
+..+.+|...+.++.++ +.++++|+.|+.+++||....... ..+. +|...+..+.|+|+|.++++++.||.|
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-----~h~~~~~~~~~~~~g~~l~s~~~D~~v 254 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-----GHSQEVCGLRWAPDGRHLASGGNDNLV 254 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEec-----ccccceeeeeecCCCCeeeeeeccccc
Confidence 88889999999998875 789999999999999999875443 3343 677899999999999999999999999
Q ss_pred EEEEcCCCc----eeeeeeCCCCCeEEEEEcCCC-cEEEEE--eCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 382 KIWDVKSQA----NVAKFDGHVGAVTAISFSENG-YYLATA--AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 382 ~iwd~~~~~----~~~~~~~~~~~i~~l~~s~~g-~~l~s~--~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
++||..+++ .+..+..|...|.+++|+|++ .+++++ +.|+ |++||+++++....+..+ ..+.++.|+++
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~---~~v~~~~~~~~ 331 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH---SQVCSILWSPH 331 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS---SCEEEEEEETT
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc---cceeeeeecCC
Confidence 999998765 345667799999999999965 555554 4567 999999999988888764 57999999999
Q ss_pred CCEEEEEe--Cc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 454 GSYLAVAS--AD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 454 g~~l~~~~--~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+..+++++ .| |+|||+ .+++++..+.+| .+.|++++|+|+|+.
T Consensus 332 ~~~lv~~sg~~d~~I~iwd~----~~~~~v~~l~gH--~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 332 YKELISGHGFAQNQLVIWKY----PTMAKVAELKGH--TSRVLSLTMSPDGAT 378 (420)
T ss_dssp TTEEEEEECTTTCCEEEEET----TTCCEEEEECCC--SSCEEEEEECTTSSC
T ss_pred CCeEEEEEecCCCEEEEEEC----CCCcEEEEEcCC--CCCEEEEEEcCCCCE
Confidence 99998875 34 999998 778999999999 889999999999964
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-33 Score=277.45 Aligned_cols=208 Identities=13% Similarity=0.125 Sum_probs=173.2
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc---eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ---IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~ 294 (504)
...+|...|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|...|.+++|+|++++|++|+.||.|++||+
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 345789999999999999999999999999999999877 67788899999999999999999999999999999999
Q ss_pred CCCCCcceeEEecc-CCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---------------EEEEeecCCCCCCCC
Q 010669 295 SEDGNYDCKHTLKD-HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI---------------CLTQVSDAGTDGRPE 358 (504)
Q Consensus 295 ~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~~ 358 (504)
..+..+.....+.. |...|.+++|+|++++|++++.||.|++||++.+. ....... . +|..
T Consensus 130 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 206 (377)
T 3dwl_C 130 EQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE--Y-PSGG 206 (377)
T ss_dssp -----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC--C-CCSS
T ss_pred CCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhc--c-cCCc
Confidence 88644445677777 99999999999999999999999999999996322 1111111 2 6778
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce----eeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcC
Q 010669 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLR 428 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~----~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~ 428 (504)
.|.+++|+|++++|++|+.||.|++||+++++. +..+.+|...|.+++|+|+|.+|++++.+++.+|+..
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 899999999999999999999999999999887 7888999999999999999999999988886688775
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-31 Score=269.93 Aligned_cols=259 Identities=20% Similarity=0.428 Sum_probs=230.7
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|.+++|+ ++++++|+.||.|++||+.+++.+..+.+|...|.++.|+ ++.+++|+.||+|++||+.++
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC
T ss_pred EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC
Confidence 345789999999997 6799999999999999999999999999999999999994 678999999999999999876
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.....+.+|...|.++.| +++++++|+.||.|++||+++++.+..+. +|...+.+++| ++.++++|+.
T Consensus 230 ---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~ 297 (445)
T 2ovr_B 230 ---QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ-----GHTNRVYSLQF--DGIHVVSGSL 297 (445)
T ss_dssp ---CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC-----CCSSCEEEEEE--CSSEEEEEET
T ss_pred ---cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec-----CCCCceEEEEE--CCCEEEEEeC
Confidence 677788899999999999 78999999999999999999998888775 67788999999 7899999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC-CCCCeeEEEECCCCC
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD-SETPTNSVDFDHSGS 455 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~-~~~~v~~i~~~~~g~ 455 (504)
||.|++||+++++.+..+.+|...+.++.+ ++.+|++|+.|+ |++||+++++.+..+..+. +...|.+++|+ ++
T Consensus 298 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~ 373 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN 373 (445)
T ss_dssp TSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SS
T ss_pred CCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CC
Confidence 999999999999999999999999999888 567999999998 9999999999888887632 46789999995 68
Q ss_pred EEEEEeCc--EEEEEeeccCccceeEEEc-----cCCCCCCceeEEEEeecCcc
Q 010669 456 YLAVASAD--IRVYQVASVKADWNCIKTF-----PDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 456 ~l~~~~~d--i~vw~~~~~~~~~~~i~~~-----~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|++|+.| |++|++ .+++.+..+ .+| .+.|++++|+|+|..
T Consensus 374 ~l~s~~~dg~v~iwd~----~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~ 421 (445)
T 2ovr_B 374 FVITSSDDGTVKLWDL----KTGEFIRNLVTLESGGS--GGVVWRIRASNTKLV 421 (445)
T ss_dssp EEEEEETTSEEEEEET----TTCCEEEEEEECTTGGG--TCEEEEEEECSSEEE
T ss_pred EEEEEeCCCeEEEEEC----CCCceeeeeeccccCCC--CceEEEEEecCCEEE
Confidence 99999988 999998 567777766 345 789999999999875
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.1e-32 Score=277.80 Aligned_cols=245 Identities=21% Similarity=0.356 Sum_probs=209.0
Q ss_pred cCCCCCeEEEEeccC-CCEEEEEeCCCcEEEEcCCC----------CceEEEcccCccceeEEEEeeCCC-EEEEEeCCC
Q 010669 220 KTSKPGIVSLDIHYS-KDVIATGGVDTNAVLFDRPS----------GQIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADK 287 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~-~~~l~sg~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg 287 (504)
..|.+.|++++|+|+ +.+|++|+.||.|++|++.+ ...+..+.+|...|.+++|+|++. +|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 457889999999997 67999999999999999876 567788889999999999999888 999999999
Q ss_pred cEEEEeCCCCCC----cceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCC---eEEEEeecCCCCCCCCC
Q 010669 288 TVRVWQGSEDGN----YDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSG---ICLTQVSDAGTDGRPEG 359 (504)
Q Consensus 288 ~i~iwd~~~~~~----~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~ 359 (504)
.|++||+..... ......+.+|...|.+++|+| ++.+|++++.||.|++||++++ .....+. .|...
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~ 279 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-----AHTAE 279 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-----CCSSC
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-----cCCCC
Confidence 999999987422 122456678999999999999 6789999999999999999987 3444443 56788
Q ss_pred eEEEEECCCCC-EEEEEeCCCcEEEEEcCC-CceeeeeeCCCCCeEEEEEcCCC-cEEEEEeCCc-EEEEEcCCC-----
Q 010669 360 YTSAAFHPDGL-ILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENG-YYLATAAHDG-VKLWDLRKL----- 430 (504)
Q Consensus 360 v~~~~~~pdg~-~l~~g~~dg~I~iwd~~~-~~~~~~~~~~~~~i~~l~~s~~g-~~l~s~~~d~-v~vwd~~~~----- 430 (504)
|++++|+|++. +|++|+.||.|++||+++ ..++..+..|...|++++|+|++ .+|++++.|+ |++||++..
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccC
Confidence 99999999886 799999999999999998 56788899999999999999998 5789999998 999999873
Q ss_pred ---------cceeeeecCCCCCCeeEEEECCCCC-EEEEEeCc--EEEEEeec
Q 010669 431 ---------KNFRSFESSDSETPTNSVDFDHSGS-YLAVASAD--IRVYQVAS 471 (504)
Q Consensus 431 ---------~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~~~d--i~vw~~~~ 471 (504)
..+..+. .+...|.+++|+|++. +|++++.| |+||++..
T Consensus 360 ~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHHHHCCTTEEEECC--CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccccccCCcceEEEcC--CCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 2333333 3467899999999999 88888888 99999843
No 88
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-31 Score=261.62 Aligned_cols=245 Identities=17% Similarity=0.237 Sum_probs=217.8
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCC-----CcEEEE
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD-----KTVRVW 292 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d-----g~i~iw 292 (504)
....|...|.+++|+|++++|++++.||.|++||+.+++.+..+. |...|.+++|+|+++++++++.+ |.|++|
T Consensus 69 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~ 147 (369)
T 3zwl_B 69 TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIY 147 (369)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEE
T ss_pred hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEE
Confidence 345788999999999999999999999999999999999988888 88899999999999999999999 999999
Q ss_pred eCCCCCCc--------ceeEEeccCCc--CeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCCCCCCeE
Q 010669 293 QGSEDGNY--------DCKHTLKDHTA--EVQAVTVHATNKYFVTASLDNTWCFYDLSS-GICLTQVSDAGTDGRPEGYT 361 (504)
Q Consensus 293 d~~~~~~~--------~~~~~~~~h~~--~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~ 361 (504)
|+...... .....+..|.+ .+.+++|+|++++|++++.||.|++||+++ +.....+. .|...|.
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~ 222 (369)
T 3zwl_B 148 EIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-----LHEKSIS 222 (369)
T ss_dssp EEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-----CCSSCEE
T ss_pred EecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-----cCCCcee
Confidence 98765321 13344455665 899999999999999999999999999998 67666665 5678899
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc---------------EEEEE
Q 010669 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG---------------VKLWD 426 (504)
Q Consensus 362 ~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~---------------v~vwd 426 (504)
+++|+|++.+|++++.||.|++||+++++.+..+. +...+.+++|+|++.++++++.++ +++||
T Consensus 223 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 223 DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred EEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 99999999999999999999999999999988888 778999999999999999988763 89999
Q ss_pred cCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeec
Q 010669 427 LRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
+.+++.+..+..+ ...|.+++|+|++++|++++.| |++|++..
T Consensus 302 ~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 302 KIFEEEIGRVQGH--FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp TTTCCEEEEEECC--SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cCCCcchhheecc--cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 9999988888766 6789999999999999999988 99999943
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.7e-32 Score=292.86 Aligned_cols=244 Identities=20% Similarity=0.345 Sum_probs=221.9
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
...|..+|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||+|++||+.++.
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc
Confidence 44688999999999999999999999999999999999999999999999999999999999999999999999998642
Q ss_pred CcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC--CCCEEEEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP--DGLILGTG 375 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--dg~~l~~g 375 (504)
.....+.+|...|.+++|+| +++.|++++.||.|++||+.++.....+.. .+...+.+++|+| ++.++++|
T Consensus 131 --~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 131 --ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT----GQERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp --EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC----CCTTCCCEEEECCSTTCCEEEEE
T ss_pred --eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec----CCCCCEEEEEEEECCCCCEEEEE
Confidence 55677789999999999999 889999999999999999998877766652 3447899999999 99999999
Q ss_pred eCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCC
Q 010669 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG 454 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g 454 (504)
+.||.|++||+++++.+..+.+|...|++++|+|+|.+|++++.|+ |++||+.+++....+..+ ...+.+++|+|+|
T Consensus 205 ~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 205 SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG--LERSWCIATHPTG 282 (814)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS--SSSEEEEEECTTC
T ss_pred eCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC--CCcEEEEEEccCC
Confidence 9999999999999999999999999999999999999999999998 999999999888888765 5789999999999
Q ss_pred C--EEEEEeCc-EEEEEee
Q 010669 455 S--YLAVASAD-IRVYQVA 470 (504)
Q Consensus 455 ~--~l~~~~~d-i~vw~~~ 470 (504)
. ++++++.+ +.+|++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 283 RKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp GGGEEEEEETTEEEEEECS
T ss_pred CceEEEEEeCCCEEEEEcC
Confidence 7 67777777 8888864
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.5e-32 Score=306.20 Aligned_cols=275 Identities=21% Similarity=0.352 Sum_probs=239.3
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEee--CCCEEEEEeCCCcEEEEeCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT--EGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~s~dg~i~iwd~~~ 296 (504)
..+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.++++|+.||.|++||+.+
T Consensus 653 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 356899999999999999999999999999999999999999999999999999999 555899999999999999988
Q ss_pred CCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC------------------------
Q 010669 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAG------------------------ 352 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------------------------ 352 (504)
+ .+...+.+|.+.|.+++|+|+++++++++.||.|++||+.++.....+....
T Consensus 733 ~---~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d 809 (1249)
T 3sfz_A 733 K---ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSAD 809 (1249)
T ss_dssp S---SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTT
T ss_pred c---chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCC
Confidence 6 6778888999999999999999999999999999999998887655443110
Q ss_pred --------------------------CCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEE
Q 010669 353 --------------------------TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406 (504)
Q Consensus 353 --------------------------~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~ 406 (504)
..+|...+.+++|+|++.++++|+.||.|++||+.++..+..+.+|.+.|++++
T Consensus 810 g~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~ 889 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVM 889 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEE
Confidence 015667899999999999999999999999999999999999999999999999
Q ss_pred EcCCCcEEEEEeCCc-EEEEEcCCCcce-----------------------------eeeecC------CCCCCeeEEEE
Q 010669 407 FSENGYYLATAAHDG-VKLWDLRKLKNF-----------------------------RSFESS------DSETPTNSVDF 450 (504)
Q Consensus 407 ~s~~g~~l~s~~~d~-v~vwd~~~~~~~-----------------------------~~~~~~------~~~~~v~~i~~ 450 (504)
|+|+|.+|++++.|+ |++||+.+.... ..+... .....+.+++|
T Consensus 890 ~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 969 (1249)
T 3sfz_A 890 FSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCL 969 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEE
Confidence 999999999999998 999997642110 000000 01357899999
Q ss_pred CCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 451 DHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 451 ~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|+++++++|+.+ +++|++ .++..+..+.+| .+.|++++|+|+|+.
T Consensus 970 sp~g~~l~~g~~~g~i~i~d~----~~~~~~~~~~~h--~~~v~~l~~s~dg~~ 1017 (1249)
T 3sfz_A 970 SPHLEYVAFGDEDGAIKIIEL----PNNRVFSSGVGH--KKAVRHIQFTADGKT 1017 (1249)
T ss_dssp CTTSSEEEEEETTSCCEEEET----TTTSCEEECCCC--SSCCCCEEECSSSSC
T ss_pred cCCCCEEEEEcCCCCEEEEEc----CCCceeeecccC--CCceEEEEECCCCCE
Confidence 9999999999998 999998 667788889998 889999999999864
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8e-32 Score=283.31 Aligned_cols=266 Identities=18% Similarity=0.209 Sum_probs=230.8
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC----ceEEEcccCccc-eeEEEEee--CCCEEEEEeCCCcEEE
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG----QIVTTLSGHSKK-VTSVKFVT--EGDLFLTGSADKTVRV 291 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~-v~~l~~s~--~~~~l~s~s~dg~i~i 291 (504)
...|...|.+++|+|++++|++++ ++.|.+||+.++ +....+.+|... |++++|+| ++++|++|+.||.|++
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred CCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 346788999999999999999998 889999999998 889999999999 99999999 9999999999999999
Q ss_pred EeCCCCC-----CcceeEEeccCCcCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeEEEEeecCCCCCCCCCeEE
Q 010669 292 WQGSEDG-----NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362 (504)
Q Consensus 292 wd~~~~~-----~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 362 (504)
||+.++. .......+..|...|.+++|+|+++++++++.+ +.|.+|| .++....+. +|...|.+
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~-----~~~~~v~~ 165 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS-----GHSQRINA 165 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC-----SCSSCEEE
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee-----cCCccEEE
Confidence 9996420 225667778899999999999999999999988 6888888 455555554 67889999
Q ss_pred EEECCCCC-EEEEEeCCCcEEEEEcCCCceeeeeeCCCC---CeEEEEEcCC-CcEEEEEeCCc-EEEEEcCCCcceeee
Q 010669 363 AAFHPDGL-ILGTGTSEALVKIWDVKSQANVAKFDGHVG---AVTAISFSEN-GYYLATAAHDG-VKLWDLRKLKNFRSF 436 (504)
Q Consensus 363 ~~~~pdg~-~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~---~i~~l~~s~~-g~~l~s~~~d~-v~vwd~~~~~~~~~~ 436 (504)
++|+|++. ++++++.||.|++||+.+++.+..+.+|.. .|++++|+|+ +.+|++++.++ |++||+++++.+..+
T Consensus 166 ~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp EEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred EEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 99999998 899999999999999999999999999999 9999999999 99999999998 999999999988877
Q ss_pred ecC--CCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCC--CCCceeEEEEe
Q 010669 437 ESS--DSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLS--GTGAASFLFLF 497 (504)
Q Consensus 437 ~~~--~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~--~~~~v~~l~~~ 497 (504)
... .+...|.+++|+ ++.+|++++.| +++|++ .+++.+..+..+. ....+.++.+.
T Consensus 246 ~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDV----TTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp CBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEET----TTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred cccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEEC----CCCcEEEEEcCCCCcccCceeEEEeC
Confidence 221 236899999999 99999999988 999998 6677888877652 12456666664
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-33 Score=285.04 Aligned_cols=244 Identities=10% Similarity=0.084 Sum_probs=199.5
Q ss_pred cCCCCCeEEEEeccC------CCEEEEEeCCCcEEEEcCCCCce-----------EEEcccCccceeEEEEeeCCCEEEE
Q 010669 220 KTSKPGIVSLDIHYS------KDVIATGGVDTNAVLFDRPSGQI-----------VTTLSGHSKKVTSVKFVTEGDLFLT 282 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~------~~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~h~~~v~~l~~s~~~~~l~s 282 (504)
..|.+.|.+++|+|+ +.+||+|+.||+|++||+.++.. ...+.+|...|++++|+++ ..|++
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~las 282 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVC 282 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEE
Confidence 356788999999997 57999999999999999976532 2467889999999999975 48999
Q ss_pred EeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEE--EEccCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCC
Q 010669 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV--TVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEG 359 (504)
Q Consensus 283 ~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l--~~~p~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 359 (504)
|+.||+|++||+.++. .....+.+|...|.++ .|+|++ .+|++|+.|++|++||+++++....+... .....
T Consensus 283 gs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~---~~~~~ 357 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR---FRGSN 357 (524)
T ss_dssp EETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE---CSCCS
T ss_pred EeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc---cccCc
Confidence 9999999999998642 3445678999999999 567887 89999999999999999987765544321 11124
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc-------
Q 010669 360 YTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK------- 431 (504)
Q Consensus 360 v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~------- 431 (504)
+.+++|+|++..+++++.|++|++||++++.++..+.+|.+.|++|+|+|+|.+|++|+.|+ |++||+....
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~ 437 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNS 437 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC---
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccC
Confidence 78999999999999999999999999999998888999999999999999999999999998 9999864210
Q ss_pred -------ceeee----------------------------ecCCCCCCeeEEEECCCCC---EEEEEeCc--EEEEEe
Q 010669 432 -------NFRSF----------------------------ESSDSETPTNSVDFDHSGS---YLAVASAD--IRVYQV 469 (504)
Q Consensus 432 -------~~~~~----------------------------~~~~~~~~v~~i~~~~~g~---~l~~~~~d--i~vw~~ 469 (504)
.+..+ ....+...|.+++|+|++. .+++|+.+ |+||++
T Consensus 438 ~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 438 SATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp ---CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred ccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 00001 0112356789999999964 99999987 999998
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.6e-31 Score=281.03 Aligned_cols=263 Identities=14% Similarity=0.198 Sum_probs=234.6
Q ss_pred cccCCCCC-eEEEEecc--CCCEEEEEeCCCcEEEEcCCCC--------ceEEEcccCccceeEEEEeeCCCEEEEEeCC
Q 010669 218 LHKTSKPG-IVSLDIHY--SKDVIATGGVDTNAVLFDRPSG--------QIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286 (504)
Q Consensus 218 ~~~~~~~~-I~~~~~s~--~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d 286 (504)
...+|... |++++|+| ++++|++|+.||.|++||+.++ +....+..|...|.+++|+|++++|++++.+
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence 35678889 99999999 9999999999999999999754 6777888999999999999999999999988
Q ss_pred ----CcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCC---
Q 010669 287 ----KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE--- 358 (504)
Q Consensus 287 ----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--- 358 (504)
+.|.+||. + .....+.+|...|.+++|+|+++ .+++++.||.|++||+.+++....+. +|..
T Consensus 138 ~~~~~~v~~~d~--~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-----~~~~~~~ 207 (615)
T 1pgu_A 138 RDNFGVFISWDS--G---NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-----THHKQGS 207 (615)
T ss_dssp SSCSEEEEETTT--C---CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC-----SSSCTTC
T ss_pred CCCccEEEEEEC--C---CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec-----ccCCCCc
Confidence 78999983 2 56778889999999999999998 89999999999999999998888775 4566
Q ss_pred CeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCceeeee-e---CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc
Q 010669 359 GYTSAAFHPD-GLILGTGTSEALVKIWDVKSQANVAKF-D---GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432 (504)
Q Consensus 359 ~v~~~~~~pd-g~~l~~g~~dg~I~iwd~~~~~~~~~~-~---~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~ 432 (504)
.|.+++|+|+ +++|++++.||.|++||+++++.+..+ . .|...|.+++|+ ++.+|++++.|+ |++||+++++.
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 8999999999 999999999999999999999999998 6 899999999999 999999999998 99999999998
Q ss_pred eeeeecCC--CCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeec
Q 010669 433 FRSFESSD--SETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVL 499 (504)
Q Consensus 433 ~~~~~~~~--~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~ 499 (504)
+..+..+. ....+.++.|. ++.++++++.+ +++|++ ..++.+..+.+| .+.|++++| |+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~----~~~~~~~~~~~~--~~~v~~~~~-~~ 349 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL----GHDEVLKTISGH--NKGITALTV-NP 349 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET----TEEEEEEEECCC--SSCEEEEET-TT
T ss_pred EEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC----CCCcEEEEEeCC--CCCEEEEEe-cC
Confidence 88887642 13567888886 89999999988 999998 668888899888 788999888 65
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.5e-31 Score=266.45 Aligned_cols=254 Identities=23% Similarity=0.500 Sum_probs=224.4
Q ss_pred ccCCCCCe-EEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 219 HKTSKPGI-VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 219 ~~~~~~~I-~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
..+|.+.| .+ ++++|++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+ ++++++|+.||+|++||+.++
T Consensus 114 l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 114 LKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred ecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence 45677665 55 45569999999999999999999999999999999999999996 679999999999999999886
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.....+.+|...|.++.|+ ++.+++|+.||.|++||+.+++....+. +|...+.+++| ++.++++|+.
T Consensus 190 ---~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 190 ---ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp ---EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEE-----CCSSCEEEEEE--CSSCEEEEET
T ss_pred ---cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEc-----CCcccEEEEEE--CCCEEEEEcC
Confidence 6788889999999999995 6789999999999999999999888776 67788999999 7889999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCE
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~ 456 (504)
||.|++||+++++.+..+.+|...|.++.| ++.++++++.|+ |++||+++++.+..+..+ ...+.++.+ ++.+
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~ 331 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNI 331 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC--CSCEEEEEE--ETTE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC--cccEEEEEE--eCCE
Confidence 999999999999999999999999999999 889999999998 999999999988888765 567887777 5679
Q ss_pred EEEEeCc--EEEEEeeccCccceeEEEccCCC-CCCceeEEEEee
Q 010669 457 LAVASAD--IRVYQVASVKADWNCIKTFPDLS-GTGAASFLFLFV 498 (504)
Q Consensus 457 l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~-~~~~v~~l~~~~ 498 (504)
+++|+.| |++||+ .+++.+..+.++. +.+.|+++++.+
T Consensus 332 l~~~~~dg~i~vwd~----~~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 332 LVSGNADSTVKIWDI----KTGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp EEEEETTSCEEEEET----TTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred EEEEeCCCeEEEEEC----CCCcEEEEEccCCCCCCCEEEEEECC
Confidence 9999988 999998 6678888887631 278899998853
No 95
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-31 Score=253.15 Aligned_cols=236 Identities=24% Similarity=0.335 Sum_probs=206.5
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC---ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG---QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~ 294 (504)
....|...|.+++|+|++++|++|+.||.|++|++... +.+..+.+|...|.++.| +++++++++.||.|++||
T Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d- 130 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK- 130 (313)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-
T ss_pred EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-
Confidence 34567889999999999999999999999999997654 567788899999999999 678999999999999999
Q ss_pred CCCCCcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE
Q 010669 295 SEDGNYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~ 373 (504)
.. .....+..|...|.++.|+| +++++++++.||.|++|| .+.....+.. .+...+.+++|+|++. ++
T Consensus 131 -~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~----~~~~~i~~~~~~~~~~-~~ 199 (313)
T 3odt_A 131 -EG---SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSG----IHNDVVRHLAVVDDGH-FI 199 (313)
T ss_dssp -TT---EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECS----SCSSCEEEEEEEETTE-EE
T ss_pred -CC---cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEec----cCcccEEEEEEcCCCe-EE
Confidence 22 66777889999999999998 899999999999999999 4445555531 3678899999999998 99
Q ss_pred EEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECC
Q 010669 374 TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDH 452 (504)
Q Consensus 374 ~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~ 452 (504)
+++.||.|++||+++++.+..+.+|...|++++|+|++ .|++++.|+ |++||+++++....+..+ ...+.+++|+|
T Consensus 200 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~i~~~~~~~ 276 (313)
T 3odt_A 200 SCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP--AISIWSVDCMS 276 (313)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS--SSCEEEEEECT
T ss_pred EccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc--CceEEEEEEcc
Confidence 99999999999999999999999999999999999999 588888888 999999999998888776 56899999999
Q ss_pred CCCEEEEEeCc--EEEEEeec
Q 010669 453 SGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 453 ~g~~l~~~~~d--i~vw~~~~ 471 (504)
+++++ +++.| |++|++..
T Consensus 277 ~~~~~-~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 277 NGDII-VGSSDNLVRIFSQEK 296 (313)
T ss_dssp TSCEE-EEETTSCEEEEESCG
T ss_pred CCCEE-EEeCCCcEEEEeCCC
Confidence 99955 56666 99999843
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.3e-32 Score=274.62 Aligned_cols=245 Identities=15% Similarity=0.140 Sum_probs=200.0
Q ss_pred ccCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCCCceEEEcc--cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 219 HKTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPSGQIVTTLS--GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
..+|.+.|++|+|+| ++++|++|+.||+|++||+.++....... .+...+.+++|+|++.+|++|+.||.|++||+.
T Consensus 160 ~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 160 GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 357899999999998 68899999999999999998665433333 344567899999999999999999999999987
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
. ..+..+.+|...|.+++|+|+++ +|++|+.|+.|++||+++.+....+.. ..+|...|++++|+|+|.+|++
T Consensus 240 ~----~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~spdg~~l~s 313 (435)
T 4e54_B 240 G----KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY--SLPHRHPVNAACFSPDGARLLT 313 (435)
T ss_dssp S----CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSB--CCBCSSCEEECCBCTTSSEEEE
T ss_pred c----ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEE--eeeccccccceeECCCCCeeEE
Confidence 5 45667889999999999999876 788999999999999998765433321 2367889999999999999999
Q ss_pred EeCCCcEEEEEcCCCceeeeeeCCCC------CeEEEEEcCCCcEEEEEe------------CCc-EEEEEcCCCcceee
Q 010669 375 GTSEALVKIWDVKSQANVAKFDGHVG------AVTAISFSENGYYLATAA------------HDG-VKLWDLRKLKNFRS 435 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~~~~~~~------~i~~l~~s~~g~~l~s~~------------~d~-v~vwd~~~~~~~~~ 435 (504)
|+.||.|+|||++++.....+..|.. .+....|+|++.+++++. .++ |++||..+++.+..
T Consensus 314 ~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~ 393 (435)
T 4e54_B 314 TDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ 393 (435)
T ss_dssp EESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE
T ss_pred EcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE
Confidence 99999999999999988777765542 234567777777776664 234 99999999988877
Q ss_pred eecCCCCCCeeEE-EECCCCCEEEEEeCc-EEEEEee
Q 010669 436 FESSDSETPTNSV-DFDHSGSYLAVASAD-IRVYQVA 470 (504)
Q Consensus 436 ~~~~~~~~~v~~i-~~~~~g~~l~~~~~d-i~vw~~~ 470 (504)
+..+ +...|.++ +|+|+|.+|++|+.+ |+||++.
T Consensus 394 l~~~-~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~ 429 (435)
T 4e54_B 394 LYDP-ESSGISSLNEFNPMGDTLASAMGYHILIWSQQ 429 (435)
T ss_dssp ECCS-SCCCCCCEEEECTTSSCEEEECSSEEEECCCC
T ss_pred EeCC-CCCcEEEEEEECCCCCEEEEEcCCcEEEEECC
Confidence 6543 25667776 699999999998876 9999983
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-30 Score=250.39 Aligned_cols=256 Identities=18% Similarity=0.321 Sum_probs=215.0
Q ss_pred eEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc--cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCccee
Q 010669 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS--GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 226 I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
+.+|+||+++ +|++|. |++|+|||+.+++.+..+. +|...|++++|+|++++|++|+.||+|++||+.++ +++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~---~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---KRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc---eeE
Confidence 4679999875 777764 9999999999999887664 67888999999999999999999999999999886 778
Q ss_pred EEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 010669 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT-QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382 (504)
Q Consensus 304 ~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~ 382 (504)
..+.+|...+.++.+ ++..+++++.++.+.+|+........ .+. +|...+.++.+++++.+|++++.||.|+
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 175 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLS-----GHSQEVCGLRWAPDGRHLASGGNDNLVN 175 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEc-----CccCceEEEEEcCCCCEEEEEecCccee
Confidence 888899998887655 57899999999999999998765443 333 6778899999999999999999999999
Q ss_pred EEEcCCCce----eeeeeCCCCCeEEEEEcCCCc-EE--EEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCC
Q 010669 383 IWDVKSQAN----VAKFDGHVGAVTAISFSENGY-YL--ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG 454 (504)
Q Consensus 383 iwd~~~~~~----~~~~~~~~~~i~~l~~s~~g~-~l--~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g 454 (504)
+||+++++. ......+.+.|.++.++|++. .+ ++++.++ |++||.+.......... ...+..+.|++++
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~---~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHY 252 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC---SSCEEEEEEETTT
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc---eeeeeeeeecccc
Confidence 999988753 344556788999999999754 33 3445556 99999998877665544 4679999999999
Q ss_pred CEEEEEe--Cc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 455 SYLAVAS--AD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 455 ~~l~~~~--~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
..+++++ .| |+|||+ .+++++.++.+| .+.|++++|+|+|+.
T Consensus 253 ~~~~~~sg~~d~~i~iwd~----~~~~~~~~l~gH--~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKY----PTMAKVAELKGH--TSRVLSLTMSPDGAT 298 (318)
T ss_dssp TEEEEEECTTTCCEEEEET----TTCCEEEEECCC--SSCEEEEEECTTSSC
T ss_pred cceEEEEEcCCCEEEEEEC----CCCcEEEEEcCC--CCCEEEEEEcCCCCE
Confidence 9988765 44 999998 778999999999 889999999999964
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.7e-32 Score=262.24 Aligned_cols=233 Identities=17% Similarity=0.235 Sum_probs=185.9
Q ss_pred EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc--CCCEEEEEeCCCeEEEE
Q 010669 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA--TNKYFVTASLDNTWCFY 337 (504)
Q Consensus 260 ~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~l~s~s~dg~i~iw 337 (504)
.+.+|.+.|++++|+|+|++|++|+.|++|++||+.++. ...+..+.+|.+.|.+++|++ ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 456899999999999999999999999999999997642 235677889999999999975 48999999999999999
Q ss_pred ECCCCe--EEEEeecCCCCCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCce---eeeeeCCCCCeEEEEEcCC
Q 010669 338 DLSSGI--CLTQVSDAGTDGRPEGYTSAAFHPD--GLILGTGTSEALVKIWDVKSQAN---VAKFDGHVGAVTAISFSEN 410 (504)
Q Consensus 338 d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~pd--g~~l~~g~~dg~I~iwd~~~~~~---~~~~~~~~~~i~~l~~s~~ 410 (504)
|++++. ....+. +|...|.+++|+|+ +.+|++|+.||.|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~-----~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 87 REENGTWEKSHEHA-----GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CCSSSCCCEEEEEC-----CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred ECCCCcceEEEEcc-----CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 999874 333332 67889999999997 88999999999999999987632 3556789999999999997
Q ss_pred -----------------CcEEEEEeCCc-EEEEEcCCC---cceeeeecCCCCCCeeEEEECCCC----CEEEEEeCc--
Q 010669 411 -----------------GYYLATAAHDG-VKLWDLRKL---KNFRSFESSDSETPTNSVDFDHSG----SYLAVASAD-- 463 (504)
Q Consensus 411 -----------------g~~l~s~~~d~-v~vwd~~~~---~~~~~~~~~~~~~~v~~i~~~~~g----~~l~~~~~d-- 463 (504)
+.+|++|+.|+ |++||++.. +....+..| ...|.+++|+|++ .+|++++.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h--~~~V~~v~~sp~~~~~~~~las~s~D~~ 239 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH--SDWVRDVAWAPSIGLPTSTIASCSQDGR 239 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC--SSCEEEEECCCCSSCSCCEEEEEETTCE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC--CCceEEEEecCCCCCCCceEEEEcCCCe
Confidence 46899999998 999999755 344445444 6789999999987 899999999
Q ss_pred EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 464 IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 464 i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
|+||++............+..| .+.|.+++|+|+|+.
T Consensus 240 v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~ 276 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITANI 276 (316)
T ss_dssp EEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCC
T ss_pred EEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCCE
Confidence 9999985421111112234556 789999999999864
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=270.19 Aligned_cols=236 Identities=15% Similarity=0.232 Sum_probs=197.1
Q ss_pred CCeEEEEeccCC--CEEEEEeCCCcEEEEcCCCCceE---------------------------------------EE-c
Q 010669 224 PGIVSLDIHYSK--DVIATGGVDTNAVLFDRPSGQIV---------------------------------------TT-L 261 (504)
Q Consensus 224 ~~I~~~~~s~~~--~~l~sg~~dg~i~vwd~~~~~~~---------------------------------------~~-~ 261 (504)
..|++++|+|++ .+|++++.||.|++||+.++... .. .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 79999999999999998764432 12 4
Q ss_pred ccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE-------EeccCCcCeEEEEEccCC-CEEEEEeCCCe
Q 010669 262 SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH-------TLKDHTAEVQAVTVHATN-KYFVTASLDNT 333 (504)
Q Consensus 262 ~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~h~~~v~~l~~~p~~-~~l~s~s~dg~ 333 (504)
.+|...|++++|+|++++|++| .||.|++||+.... .... .+.+|...|.+++|+|++ ++|++|+.||.
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 6899999999999999999998 79999999998432 2333 356899999999999998 99999999999
Q ss_pred EEEEECCCCeE----EEEeecCCCCCCCC------------CeEEEEECCCCCEEEEEeCCCcEEEEEcCC-Cceeeeee
Q 010669 334 WCFYDLSSGIC----LTQVSDAGTDGRPE------------GYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFD 396 (504)
Q Consensus 334 i~iwd~~~~~~----~~~~~~~~~~~~~~------------~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~-~~~~~~~~ 396 (504)
|++||++++.. ...+. .|.. .|.+++|+|+|.+|++++. |.|++||+++ ++++..+.
T Consensus 251 i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFE-----EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp EEEEETTTCSSSCTTCEEEC-----CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred EEEEECcCCccccceeeEec-----cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 99999999875 45554 3333 8999999999999999999 9999999997 88888888
Q ss_pred CCCCC---------------eEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC---------------------
Q 010669 397 GHVGA---------------VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS--------------------- 439 (504)
Q Consensus 397 ~~~~~---------------i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~--------------------- 439 (504)
+|... +..++|+|+|.+|++|+.|+ |++||+.+++.+. +..+
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKR 403 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCC
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCc
Confidence 88642 33499999999999999999 9999999877643 1111
Q ss_pred ----------CCCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 440 ----------DSETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 440 ----------~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
.....|..++|+|++++|++++.+ +.+|.-
T Consensus 404 ~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 404 KKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp CTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ccccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 224568899999999999999998 999974
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.8e-31 Score=265.54 Aligned_cols=235 Identities=23% Similarity=0.444 Sum_probs=207.8
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
...+|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +.++++|+.||.|++||+.++
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSS
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCC
Confidence 34578999999998 78999999999999999999999999999999999999996 569999999999999999886
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
........+.+|...|.+++| +++++++|+.||.|++||+++++.+..+. +|...+.++.| ++.++++|+.
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~g~~ 314 (435)
T 1p22_A 244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-----GHKRGIACLQY--RDRLVVSGSS 314 (435)
T ss_dssp SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEEEE--ETTEEEEEET
T ss_pred CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-----CCCCcEEEEEe--CCCEEEEEeC
Confidence 544444677899999999999 68999999999999999999999888876 66788999999 4789999999
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc---------ceeeeecCCCCCCeeE
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK---------NFRSFESSDSETPTNS 447 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~---------~~~~~~~~~~~~~v~~ 447 (504)
||.|++||+++++.+..+.+|...|.+++| ++.+|++|+.|+ |++||++++. .+..+..+ ...|.+
T Consensus 315 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h--~~~v~~ 390 (435)
T 1p22_A 315 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH--SGRVFR 390 (435)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC--SSCCCC
T ss_pred CCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC--CCCeEE
Confidence 999999999999999999999999999999 788999999999 9999998765 55566554 678999
Q ss_pred EEECCCCCEEEEEeCc--EEEEEeec
Q 010669 448 VDFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 448 i~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
++| ++.+|++++.| |++|++..
T Consensus 391 l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 391 LQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEE--CSSCEEECCSSSEEEEEC---
T ss_pred EEe--CCCEEEEEeCCCEEEEEECCC
Confidence 999 78889999988 99999943
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-31 Score=289.43 Aligned_cols=276 Identities=17% Similarity=0.167 Sum_probs=205.2
Q ss_pred CCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceE-----------EEcccCccceeEEEEeeC-CCEEEEEeCCCcE
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIV-----------TTLSGHSKKVTSVKFVTE-GDLFLTGSADKTV 289 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~-----------~~~~~h~~~v~~l~~s~~-~~~l~s~s~dg~i 289 (504)
|...|++++|+|++++|++|+.||.|++||+.+++.. ..+.+|.+.|++++|+|+ +..|++|+.||+|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v 176 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL 176 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE
Confidence 5678999999999999999999999999999988753 234679999999999995 5789999999999
Q ss_pred EEEeCCCCCCcceeEEeccC------------------CcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecC
Q 010669 290 RVWQGSEDGNYDCKHTLKDH------------------TAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351 (504)
Q Consensus 290 ~iwd~~~~~~~~~~~~~~~h------------------~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 351 (504)
+||+.++ .+...+..| ...|.+++|+|+|++|++|+.||.|++||+++++.+......
T Consensus 177 -lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~ 252 (902)
T 2oaj_A 177 -TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVF 252 (902)
T ss_dssp -EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSS
T ss_pred -EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeec
Confidence 9999875 555556544 578999999999999999999999999999998876531110
Q ss_pred CCC-------------CCCCCeEEEEEC----CCC-CEEEEEeC------------------------------------
Q 010669 352 GTD-------------GRPEGYTSAAFH----PDG-LILGTGTS------------------------------------ 377 (504)
Q Consensus 352 ~~~-------------~~~~~v~~~~~~----pdg-~~l~~g~~------------------------------------ 377 (504)
... .+...|.+++|+ |++ .++++|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~ 332 (902)
T 2oaj_A 253 ETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPK 332 (902)
T ss_dssp CSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCS
T ss_pred ccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCcc
Confidence 000 123467888884 432 34555533
Q ss_pred ----------------------------------------CCcEEEEEcCCCceeee-----------------------
Q 010669 378 ----------------------------------------EALVKIWDVKSQANVAK----------------------- 394 (504)
Q Consensus 378 ----------------------------------------dg~I~iwd~~~~~~~~~----------------------- 394 (504)
||.|++||+.++.....
T Consensus 333 ~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~ 412 (902)
T 2oaj_A 333 QMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASV 412 (902)
T ss_dssp EEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEE
T ss_pred ceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEc
Confidence 34455555544322111
Q ss_pred ------------------eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcce--eeee--c-----CCCCCCee
Q 010669 395 ------------------FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNF--RSFE--S-----SDSETPTN 446 (504)
Q Consensus 395 ------------------~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~--~~~~--~-----~~~~~~v~ 446 (504)
+.+|...+.+++|+|+|.+|++|+.|+ |++||+.++... ..+. . ..+...|.
T Consensus 413 ~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~ 492 (902)
T 2oaj_A 413 PNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVD 492 (902)
T ss_dssp EHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEE
T ss_pred CHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCcee
Confidence 122233334455678999999999999 999999887432 1111 0 13467899
Q ss_pred EEEECCCCCEEEEEeCc--EEEEEeeccCc-----------------------------------------cceeEEEcc
Q 010669 447 SVDFDHSGSYLAVASAD--IRVYQVASVKA-----------------------------------------DWNCIKTFP 483 (504)
Q Consensus 447 ~i~~~~~g~~l~~~~~d--i~vw~~~~~~~-----------------------------------------~~~~i~~~~ 483 (504)
+++|+|+|++||+|+.| |+||++..... .++++..+.
T Consensus 493 svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 572 (902)
T 2oaj_A 493 KISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH 572 (902)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE
Confidence 99999999999999999 99999965421 024678888
Q ss_pred CCCCCCceeEEEEeecCccc
Q 010669 484 DLSGTGAASFLFLFVLGQTC 503 (504)
Q Consensus 484 ~h~~~~~v~~l~~~~~g~~~ 503 (504)
+| .+.|++++|+|+|.++
T Consensus 573 ~h--~~~V~svafSpdG~lA 590 (902)
T 2oaj_A 573 AN--KGKTSAINNSNIGFVG 590 (902)
T ss_dssp CC--SCSEEEEEECBTSEEE
T ss_pred cC--CCcEEEEEecCCcEEE
Confidence 98 8899999999999554
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.7e-31 Score=265.63 Aligned_cols=243 Identities=12% Similarity=0.129 Sum_probs=177.5
Q ss_pred CCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceE-----EEcccCccceeEEEEee--------CCCEEEEEeCCCc
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIV-----TTLSGHSKKVTSVKFVT--------EGDLFLTGSADKT 288 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~-----~~~~~h~~~v~~l~~s~--------~~~~l~s~s~dg~ 288 (504)
|...+....+++++.+|++|+.|++|++||..+++.. ..+.+|.+.|++++|+| ++++|++|+.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 4445555666777889999999999999999887543 34689999999999998 7889999999999
Q ss_pred EEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecC----------------
Q 010669 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDA---------------- 351 (504)
Q Consensus 289 i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~---------------- 351 (504)
|+|||+.++ .+...+..|...|.+++|+|++. +|++++.||+|++||+++++........
T Consensus 168 v~~Wd~~~~---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 168 LIIWRLTDE---GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEEEEEETT---EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred EEEEECCCC---ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 999999775 55666678889999999999874 8999999999999999987654332210
Q ss_pred ----CCCCCCCCeEEEEEC-CCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEE------------------Ec
Q 010669 352 ----GTDGRPEGYTSAAFH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS------------------FS 408 (504)
Q Consensus 352 ----~~~~~~~~v~~~~~~-pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~------------------~s 408 (504)
...+|...+.++.|+ |||..+++++.|+.+++||+..++....+..|...+..+. |+
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEc
Confidence 113566788899987 7999999999999999999988776666655544443333 33
Q ss_pred C--CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 409 E--NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 409 ~--~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
+ ++.++++|+.|+ |++||+.++........+ ...|.+++|+|+|++||+++.+ +.+|.+
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~--~~~V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL--GMPIVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC--SSCEEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC--CCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 3 345677888888 999999999887776655 5789999999999999999999 888887
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.1e-30 Score=248.06 Aligned_cols=242 Identities=18% Similarity=0.254 Sum_probs=206.5
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGN 299 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~ 299 (504)
..|...|++++|+|++++|++|+.||+|++||+.+++.+..+.+|...+.++.+ ++..+++++.++.+++|+.....
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~- 140 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE- 140 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc-
Confidence 467888999999999999999999999999999999999999999988877654 67899999999999999987653
Q ss_pred cceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC-E--EEEEe
Q 010669 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL-I--LGTGT 376 (504)
Q Consensus 300 ~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~-~--l~~g~ 376 (504)
.....+.+|...+..+.++++++++++++.||.|++||+++++........ ...+...|.+++++|++. + +++++
T Consensus 141 -~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 141 -HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT-FTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEE-ECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred -eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceee-ecccCCceEEEEecCCCCcEEEEEecC
Confidence 566777899999999999999999999999999999999876532211110 124567899999999654 3 34667
Q ss_pred CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe--CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCC
Q 010669 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA--HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~--~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
.++.|++||.+......... +...+..+.|++++..+++++ .|+ |++||+++++.+..+..| ...|++++|+|+
T Consensus 219 ~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH--~~~V~~l~~spd 295 (318)
T 4ggc_A 219 SDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH--TSRVLSLTMSPD 295 (318)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC--SSCEEEEEECTT
T ss_pred CCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCC
Confidence 88999999998887766655 667899999999998887765 567 999999999999998876 689999999999
Q ss_pred CCEEEEEeCc--EEEEEe
Q 010669 454 GSYLAVASAD--IRVYQV 469 (504)
Q Consensus 454 g~~l~~~~~d--i~vw~~ 469 (504)
|++|++|+.| |+|||+
T Consensus 296 g~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 296 GATVASAAADETLRLWRC 313 (318)
T ss_dssp SSCEEEEETTTEEEEECC
T ss_pred CCEEEEEecCCeEEEEEC
Confidence 9999999999 999998
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-30 Score=262.16 Aligned_cols=249 Identities=12% Similarity=0.112 Sum_probs=207.6
Q ss_pred cCCCCCeEEEEeccCCCEE-EEEeCCCcEEEEcCC--CCceEEEcc--cCccceeEEEEeeCCCEEEEEeCCCcEEEEeC
Q 010669 220 KTSKPGIVSLDIHYSKDVI-ATGGVDTNAVLFDRP--SGQIVTTLS--GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~--~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~ 294 (504)
..|.+.|.+++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+|++++|++|+.||.|++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 3567889999999999986 899999999999998 888888876 56789999999999999999999999999999
Q ss_pred CCCCCcc-eeEEeccCCcCeEEEEEccC---CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 295 SEDGNYD-CKHTLKDHTAEVQAVTVHAT---NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 295 ~~~~~~~-~~~~~~~h~~~v~~l~~~p~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
....... ....+.+|...|.+++|+|+ +++|++|+.|+.|++||++++..+..+. .+|...|.+++|+ ++.
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~----~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL----FGHKHFVSSICCG-KDY 253 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC----CCCSSCEEEEEEC-STT
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee----cCCCCceEEEEEC-CCC
Confidence 8754322 44467789999999999999 9999999999999999999988776642 2677899999999 999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeC-------------------------CCCCeEEEEEcCCCcEEEEEe-CCc-EE
Q 010669 371 ILGTGTSEALVKIWDVKSQANVAKFDG-------------------------HVGAVTAISFSENGYYLATAA-HDG-VK 423 (504)
Q Consensus 371 ~l~~g~~dg~I~iwd~~~~~~~~~~~~-------------------------~~~~i~~l~~s~~g~~l~s~~-~d~-v~ 423 (504)
+|++|+.||.|++||+++++.+..+.. ....|.+++|+|++.+|++++ .++ |+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 999999999999999999998877753 235799999999999999998 667 99
Q ss_pred EEEc--CCC---cceeeeecCCCCCCeeEEEECCCCCEEEEEeC------c--EEEEEeeccCccc
Q 010669 424 LWDL--RKL---KNFRSFESSDSETPTNSVDFDHSGSYLAVASA------D--IRVYQVASVKADW 476 (504)
Q Consensus 424 vwd~--~~~---~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~------d--i~vw~~~~~~~~~ 476 (504)
+||+ ..+ ..+..+..+ ..+.+++|+|++.++++++. + +.+|.++.....+
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~ 396 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFP---YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSF 396 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECS---SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEE
T ss_pred EEEeccCCCCceeeccEeccC---CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeE
Confidence 9999 554 455555553 67999999996544444442 2 7999986544333
No 105
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-31 Score=266.61 Aligned_cols=240 Identities=14% Similarity=0.204 Sum_probs=202.5
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCC---CCceEEEccc------------CccceeEEE--EeeCCCEEEEE
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRP---SGQIVTTLSG------------HSKKVTSVK--FVTEGDLFLTG 283 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~---~~~~~~~~~~------------h~~~v~~l~--~s~~~~~l~s~ 283 (504)
.|...|.+++|+|++++|++|+.||.|++||+. +++....+.+ +...+.++. +++++.+|++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 588999999999999999999999999999984 5554443332 455677776 45789999999
Q ss_pred eCCCcEEEEeCCCCCCcceeEEecc--CCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeE
Q 010669 284 SADKTVRVWQGSEDGNYDCKHTLKD--HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361 (504)
Q Consensus 284 s~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 361 (504)
+.||.|++||+.+. .++..+.+ |.+.|.+++|+|++++|++|+.||.|++||+++++.+..+.. .|...|.
T Consensus 189 ~~d~~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~v~ 261 (437)
T 3gre_A 189 TNLSRVIIFDIRTL---ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF----GDHAPIT 261 (437)
T ss_dssp ETTSEEEEEETTTC---CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC----TTCEEEE
T ss_pred eCCCeEEEEeCCCC---eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec----CCCCceE
Confidence 99999999999886 66777777 889999999999999999999999999999999998887742 3456899
Q ss_pred EEEECC----CCCEEEEEeCCCcEEEEEcCCCceeeeeeC--------------------------CCCCeEEEEEcCCC
Q 010669 362 SAAFHP----DGLILGTGTSEALVKIWDVKSQANVAKFDG--------------------------HVGAVTAISFSENG 411 (504)
Q Consensus 362 ~~~~~p----dg~~l~~g~~dg~I~iwd~~~~~~~~~~~~--------------------------~~~~i~~l~~s~~g 411 (504)
+++|+| ++.+|++|+.||.|++||+++++.+..+.+ |...|++++|+ ++
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~ 340 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND 340 (437)
T ss_dssp EEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT
T ss_pred EEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc
Confidence 996665 688999999999999999999987776654 44568889999 77
Q ss_pred cEEEEEeCCc-EEEEEcCCCcceeeeecCC-----------------------------------CCCCeeEEEECCC--
Q 010669 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSD-----------------------------------SETPTNSVDFDHS-- 453 (504)
Q Consensus 412 ~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~-----------------------------------~~~~v~~i~~~~~-- 453 (504)
.+|++|+.|+ |++||+.+++....+..+. |...|++++|+++
T Consensus 341 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~ 420 (437)
T 3gre_A 341 KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE 420 (437)
T ss_dssp EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence 9999999998 9999999998877776531 4778999999988
Q ss_pred CCEEEEEeCc--EEEEE
Q 010669 454 GSYLAVASAD--IRVYQ 468 (504)
Q Consensus 454 g~~l~~~~~d--i~vw~ 468 (504)
+.+|++|+.| |+||+
T Consensus 421 ~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 421 TPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SEEEEEEETTSCEEEEC
T ss_pred ceEEEEEcCCceEEEeC
Confidence 7899999998 99994
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.1e-31 Score=266.05 Aligned_cols=249 Identities=10% Similarity=0.070 Sum_probs=194.9
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
...|.+++|+|||+++|+++.|++|+ |...++ .+.+|...|.+++|+|+| .++.+.+|+.+.. .
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~----~ 78 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FENKLDFELAQQN----G 78 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS----C
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC-------CcceEEEEeCCCc----e
Confidence 56899999999999999999999999 654444 457999999999999998 5666666664431 2
Q ss_pred eEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 010669 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~ 382 (504)
...+ .|...|.+++|+|+|.+|++++.||.|++||..+ .+..+. ....-....+.+++|||||++|++|+.||+|+
T Consensus 79 ~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 79 LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 2222 5578999999999999999999999999999654 344332 11101123699999999999999999999999
Q ss_pred EEEcCCCce-------eeee----eCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcce---eeeecCCCCCCeeE
Q 010669 383 IWDVKSQAN-------VAKF----DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNF---RSFESSDSETPTNS 447 (504)
Q Consensus 383 iwd~~~~~~-------~~~~----~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~---~~~~~~~~~~~v~~ 447 (504)
|||+..+.. +.++ .+|...|.+++|+|+| +++++.|+ |++||+..+... ..+.. .+...|.+
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~-~h~~~V~s 231 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN-ASRRKITD 231 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC-CCSSCCCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc-cccCcEEE
Confidence 999988753 5666 5677899999999999 67777777 999999887742 34532 23578999
Q ss_pred EEECCCCCEEEEEeCc-EEEEEeeccCccceeEEEccCCCCCCceeEEEE--eecCcc
Q 010669 448 VDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFPDLSGTGAASFLFL--FVLGQT 502 (504)
Q Consensus 448 i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~--~~~g~~ 502 (504)
++|+ |++|++++.. |++|++ ..........+| .+.|.++.| +++|+.
T Consensus 232 vaFs--g~~LASa~~~tIkLWd~----~~~~~~~~~~gh--~~~V~~va~~~s~d~~~ 281 (588)
T 2j04_A 232 LKIV--DYKVVLTCPGYVHKIDL----KNYSISSLKTGS--LENFHIIPLNHEKESTI 281 (588)
T ss_dssp EEEE--TTEEEEECSSEEEEEET----TTTEEEEEECSC--CSCCCEEEETTCSSCEE
T ss_pred EEEE--CCEEEEEeCCeEEEEEC----CCCeEEEEEcCC--CceEEEEEeeeCCCCCE
Confidence 9999 6899999866 999998 444442322277 889999999 999864
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.6e-30 Score=253.68 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=195.8
Q ss_pred ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCe
Q 010669 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNT 333 (504)
Q Consensus 256 ~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~ 333 (504)
+.+..+.+|.+.|++++|+|++++|++|+.||.|++||+... .......+.+|...|.+++|+++ +++|++++.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 456678899999999999999999999999999999999742 23667788899999999999977 899999999999
Q ss_pred EEEEECCCCe--EEEEeecCCCCCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCc--eeeeeeCCCCCeEEEEE
Q 010669 334 WCFYDLSSGI--CLTQVSDAGTDGRPEGYTSAAFHPD--GLILGTGTSEALVKIWDVKSQA--NVAKFDGHVGAVTAISF 407 (504)
Q Consensus 334 i~iwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~~pd--g~~l~~g~~dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~ 407 (504)
|++||+.+++ ....+. .|...|.+++|+|+ +.+|++++.||.|++||++.+. ....+..|...|.+++|
T Consensus 81 v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHA-----VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EEEEEcCCCceeEeeeec-----CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 9999999987 333333 57789999999999 9999999999999999998873 44566789999999999
Q ss_pred cC-------------CCcEEEEEeCCc-EEEEEcCCCcce----eeeecCCCCCCeeEEEECCC---CCEEEEEeCc--E
Q 010669 408 SE-------------NGYYLATAAHDG-VKLWDLRKLKNF----RSFESSDSETPTNSVDFDHS---GSYLAVASAD--I 464 (504)
Q Consensus 408 s~-------------~g~~l~s~~~d~-v~vwd~~~~~~~----~~~~~~~~~~~v~~i~~~~~---g~~l~~~~~d--i 464 (504)
+| ++.+|++++.|+ |++||++++... ..+.. +...|.+++|+|+ +.+|++++.| +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 99 699999999998 999999876543 33333 4678999999999 8999999988 9
Q ss_pred EEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 465 RVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 465 ~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
++|++......+ ....+..+.+.+.|++++|+|+|+.
T Consensus 234 ~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 234 IIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNV 270 (379)
T ss_dssp EEEEESSTTSCC-EEEESSSSCCSSCEEEEEECSSSCC
T ss_pred EEEeCCCCCccc-eeeeeccccCCCcEEEEEEcCCCCE
Confidence 999995432211 2223333223789999999999974
No 108
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.6e-30 Score=278.42 Aligned_cols=244 Identities=11% Similarity=0.134 Sum_probs=202.2
Q ss_pred ccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 219 HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 219 ~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
+.+|...|++++|+|++++||+|+.||.|+||+..+.+....+. |...|.+++|+| +++|++++.|++|++||+.++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~- 89 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ- 89 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC-
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC-
Confidence 44788999999999999999999999999999998877766654 788999999999 889999999999999999875
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEee-c-----CCCCCCCCCeEEEEECCC-CCE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVS-D-----AGTDGRPEGYTSAAFHPD-GLI 371 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~-----~~~~~~~~~v~~~~~~pd-g~~ 371 (504)
.++..+. |.+.|++++|+|+++++++|+.||.|++||++++....... . ....+|...|.+++|+|+ +..
T Consensus 90 --~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 90 --KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp --SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred --cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 5566664 66889999999999999999999999999999987642110 0 123478889999999995 578
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeeeCC------------------CCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc
Q 010669 372 LGTGTSEALVKIWDVKSQANVAKFDGH------------------VGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432 (504)
Q Consensus 372 l~~g~~dg~I~iwd~~~~~~~~~~~~~------------------~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~ 432 (504)
+++|+.||.| +||+++++.+..+..| ...|++++|+|+|.+|++++.|+ |++||+++++.
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999 9999999988887755 46799999999999999999999 99999999887
Q ss_pred eee--ee---cC-----------CCCCCeeEEEEC----CCC-CEEEEEeCc-------EEEEEe
Q 010669 433 FRS--FE---SS-----------DSETPTNSVDFD----HSG-SYLAVASAD-------IRVYQV 469 (504)
Q Consensus 433 ~~~--~~---~~-----------~~~~~v~~i~~~----~~g-~~l~~~~~d-------i~vw~~ 469 (504)
+.. +. .+ .+...|.+++|+ |++ .+|++|+.+ +.+|++
T Consensus 246 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 246 IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 653 21 11 123479999995 554 566777542 778885
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.2e-29 Score=246.33 Aligned_cols=236 Identities=17% Similarity=0.246 Sum_probs=197.9
Q ss_pred EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC-CcceeEEeccCCcCeEEEEEcc--CCCEEEEEeCCCeEEE
Q 010669 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG-NYDCKHTLKDHTAEVQAVTVHA--TNKYFVTASLDNTWCF 336 (504)
Q Consensus 260 ~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~h~~~v~~l~~~p--~~~~l~s~s~dg~i~i 336 (504)
.+.+|.+.|++++|+|++++|++|+.||.|++||+..+. .......+.+|...|.+++|+| ++++|++++.||.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 457899999999999999999999999999999998642 2345677789999999999999 5999999999999999
Q ss_pred EECCCC---------eEEEEeecCCCCCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCceeeeee---------
Q 010669 337 YDLSSG---------ICLTQVSDAGTDGRPEGYTSAAFHPD--GLILGTGTSEALVKIWDVKSQANVAKFD--------- 396 (504)
Q Consensus 337 wd~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~pd--g~~l~~g~~dg~I~iwd~~~~~~~~~~~--------- 396 (504)
||++++ +....+. .|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLN-----DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEEC-----CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred EecCCCcccccccCcceeeeec-----ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 999987 3444443 67789999999999 9999999999999999999887654443
Q ss_pred ----CCCCCeEEEEEcCC---CcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCC----CEEEEEeCc-
Q 010669 397 ----GHVGAVTAISFSEN---GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG----SYLAVASAD- 463 (504)
Q Consensus 397 ----~~~~~i~~l~~s~~---g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g----~~l~~~~~d- 463 (504)
.|...+.+++|+|+ +.+|++++.++ +.+|+...+..........+...|.+++|+|++ .+|++++.|
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 57789999999997 89999999998 877777766653333333447899999999998 899999998
Q ss_pred -EEEEEeeccC------------------------------------------ccceeEEEccCCCCCCceeEEEEeecC
Q 010669 464 -IRVYQVASVK------------------------------------------ADWNCIKTFPDLSGTGAASFLFLFVLG 500 (504)
Q Consensus 464 -i~vw~~~~~~------------------------------------------~~~~~i~~~~~h~~~~~v~~l~~~~~g 500 (504)
|++|++.... ..+..+..+.+| .+.|++++|+|+|
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH--NGEVWSVSWNLTG 318 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT--SSCEEEEEECSSS
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc--cccEEEEEEcCCC
Confidence 9999995421 134788888898 8899999999998
Q ss_pred cc
Q 010669 501 QT 502 (504)
Q Consensus 501 ~~ 502 (504)
+.
T Consensus 319 ~~ 320 (351)
T 3f3f_A 319 TI 320 (351)
T ss_dssp CC
T ss_pred CE
Confidence 64
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.1e-30 Score=255.09 Aligned_cols=206 Identities=16% Similarity=0.158 Sum_probs=170.8
Q ss_pred CCCCCeEEEEeccCCCEEEEE--eCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATG--GVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg--~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
.+...+.+++|||||++++++ +.|++|+|||+.+++.+..+. |.+.|.+++|+|+|+++++++.++ +++|+..++.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 345668999999999987654 478999999999999988886 778899999999999999998654 5666655532
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC----eEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN----TWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
.........|...|.+++|+|+++++++++.|+ .+.+||+........... ...+|...|++++|+|||++||+
T Consensus 209 -~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 209 -CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp -EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEE
T ss_pred -ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEE
Confidence 122334557889999999999999999999887 688899887654322110 02266788999999999999999
Q ss_pred EeCCCcEEEEEcCCCceeeee-eCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCC
Q 010669 375 GTSEALVKIWDVKSQANVAKF-DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~~-~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~ 430 (504)
|+.||.|+|||+++++++..+ .+|...|++++|+|||.+|++|+.|+ |+|||+...
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999875 78999999999999999999999998 999999643
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=3.9e-30 Score=250.17 Aligned_cols=230 Identities=17% Similarity=0.207 Sum_probs=199.2
Q ss_pred cCCCCCeEEEEeccCCC-EEEEEeCCCcEEEEcC-CCCceEEEccc--CccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 220 KTSKPGIVSLDIHYSKD-VIATGGVDTNAVLFDR-PSGQIVTTLSG--HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~-~l~sg~~dg~i~vwd~-~~~~~~~~~~~--h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
..|...|.+++|+|+++ +|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| +++|++++.||.|++||+.
T Consensus 53 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 53 LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH
T ss_pred eecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc
Confidence 36888999999999999 9999999999999999 77655 77888 999999999999 9999999999999999987
Q ss_pred C---------CCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCCCCCCeEEEEE
Q 010669 296 E---------DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS-GICLTQVSDAGTDGRPEGYTSAAF 365 (504)
Q Consensus 296 ~---------~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 365 (504)
. . .++..+. |...|.+++|+|++ +++++.|+.|++||+++ +....... ...+...+.+++|
T Consensus 131 ~~~~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 131 NYGDGVIAVKN---LNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIE---ESGLKYQIRDVAL 201 (342)
T ss_dssp HHTTBCEEEEE---SCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEE---ECSCSSCEEEEEE
T ss_pred ccccccccccC---CeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceee---ecCCCCceeEEEE
Confidence 5 3 3444454 88999999999877 99999999999999998 54322211 1155678999999
Q ss_pred CC-CCCEEEEEeCCCcEEEEEcCCC------ceeeeeeCCCC---------CeEEEEEcCCCcEEEEEeCCc-EEEEEcC
Q 010669 366 HP-DGLILGTGTSEALVKIWDVKSQ------ANVAKFDGHVG---------AVTAISFSENGYYLATAAHDG-VKLWDLR 428 (504)
Q Consensus 366 ~p-dg~~l~~g~~dg~I~iwd~~~~------~~~~~~~~~~~---------~i~~l~~s~~g~~l~s~~~d~-v~vwd~~ 428 (504)
+| ++.++++|+.||.|++||++.. +....+..|.. .|++++|+|++.+|++++.|+ |++||+.
T Consensus 202 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 99 9999999999999999999887 77888888755 999999999999999999998 9999999
Q ss_pred CCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc
Q 010669 429 KLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463 (504)
Q Consensus 429 ~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d 463 (504)
+++.+..+..+ +...|.+++ |++.+|++++.|
T Consensus 282 ~~~~~~~~~~~-h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 282 TRKKIKNFAKF-NEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp TTEEEEECCCC-SSSEEEEEE--ECSSEEEEEEEC
T ss_pred cHhHhhhhhcc-cCCCceEec--CCCCeEEEEecC
Confidence 99888777653 156899998 999999999988
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.9e-29 Score=246.09 Aligned_cols=241 Identities=10% Similarity=0.175 Sum_probs=186.4
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEE-EEEeCCCcEEEEeCCCCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF-LTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~s~dg~i~iwd~~~~~ 298 (504)
..|.+.|.+++|+|+|++|++|+.+| +++|+..+++....... ..+..+++.++++.+ ++++.|++|++||..++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~- 91 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK- 91 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT-
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC-
Confidence 66889999999999999999998775 78999987766555432 348888898888876 56788899999999876
Q ss_pred CcceeEEeccCCcCeEEEEEccCC-----------------------------------CEEEE--EeCCCeEEEEECCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATN-----------------------------------KYFVT--ASLDNTWCFYDLSS 341 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~-----------------------------------~~l~s--~s~dg~i~iwd~~~ 341 (504)
..+..+. |...|.++.|+++. .++++ |+.||.|++||+.+
T Consensus 92 --~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 92 --QDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp --EEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC
T ss_pred --cEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCC
Confidence 5556654 56688888887642 23333 46778888888876
Q ss_pred CeE----------------EEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCc-EEEEEcCCCceeeeee-C-CCCCe
Q 010669 342 GIC----------------LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVKSQANVAKFD-G-HVGAV 402 (504)
Q Consensus 342 ~~~----------------~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~-I~iwd~~~~~~~~~~~-~-~~~~i 402 (504)
+.. ...+ .+|...|++++|+|+|.+|++|+.||+ |++||+++++.+..+. + |...|
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~-----~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v 243 (355)
T 3vu4_A 169 SGSATTQDQGVQQKAILGKGVLI-----KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV 243 (355)
T ss_dssp ------------------CCEEE-----CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE
T ss_pred CCccccccccccccccCcccEEE-----EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE
Confidence 541 2233 378899999999999999999999998 9999999999999998 5 99999
Q ss_pred EEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeee--------------------ecC-CCCCCeeEEEECCCCCEEEEE
Q 010669 403 TAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF--------------------ESS-DSETPTNSVDFDHSGSYLAVA 460 (504)
Q Consensus 403 ~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~--------------------~~~-~~~~~v~~i~~~~~g~~l~~~ 460 (504)
++++|+|+|.+|++++.|+ |++||++........ ... ........++|+++|++|+++
T Consensus 244 ~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~ 323 (355)
T 3vu4_A 244 VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVW 323 (355)
T ss_dssp EEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEE
Confidence 9999999999999999998 999999765321111 011 011234679999999999999
Q ss_pred eCc--EEEEEeecc
Q 010669 461 SAD--IRVYQVASV 472 (504)
Q Consensus 461 ~~d--i~vw~~~~~ 472 (504)
+.| +++|++...
T Consensus 324 ~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 324 PHTRMIETFKVVFD 337 (355)
T ss_dssp TTTTEEEEEEEEEE
T ss_pred eCCCeEEEEEEEcC
Confidence 988 899998543
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.6e-29 Score=253.08 Aligned_cols=237 Identities=21% Similarity=0.321 Sum_probs=196.7
Q ss_pred EEcccCccceeEEEEeeC-CCEEEEEeCCCcEEEEeCCCC-------CCcceeEEeccCCcCeEEEEEccCCC-EEEEEe
Q 010669 259 TTLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSED-------GNYDCKHTLKDHTAEVQAVTVHATNK-YFVTAS 329 (504)
Q Consensus 259 ~~~~~h~~~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s 329 (504)
.....|.+.|++++|+|+ +.+|++++.||.|++||+... +.......+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344579999999999996 679999999999999999751 22366777889999999999999988 999999
Q ss_pred CCCeEEEEECCCCeE----EEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCC---ceeeeeeCCCCC
Q 010669 330 LDNTWCFYDLSSGIC----LTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTSEALVKIWDVKSQ---ANVAKFDGHVGA 401 (504)
Q Consensus 330 ~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~dg~I~iwd~~~~---~~~~~~~~~~~~ 401 (504)
.||.|++||+..+.. ..... ...+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKN--IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSE--EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred CCCeEEEEeCCCCCCCCceeccce--eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999999999987422 11011 0226778899999999 7889999999999999999987 577788889999
Q ss_pred eEEEEEcCCCc-EEEEEeCCc-EEEEEcCC-CcceeeeecCCCCCCeeEEEECCCCC-EEEEEeCc--EEEEEeeccCcc
Q 010669 402 VTAISFSENGY-YLATAAHDG-VKLWDLRK-LKNFRSFESSDSETPTNSVDFDHSGS-YLAVASAD--IRVYQVASVKAD 475 (504)
Q Consensus 402 i~~l~~s~~g~-~l~s~~~d~-v~vwd~~~-~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~~~d--i~vw~~~~~~~~ 475 (504)
|++++|+|++. +|++|+.|+ |++||+++ ...+..+..+ ...|.+++|+|++. +|++++.| |+||++......
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h--~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH--KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC--SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC--CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 99999999886 788999998 99999998 4566777655 67999999999995 68888877 999999542211
Q ss_pred ----------ceeEEEccCCCCCCceeEEEEeecCc
Q 010669 476 ----------WNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 476 ----------~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
...+..+.+| .+.|++++|+|+|+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGH--TAKISDFSWNPNEP 391 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCC--SSCEEEEEECSSST
T ss_pred cCccccccCCcceEEEcCCC--CCCceEEEECCCCC
Confidence 3678888888 88999999999987
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=7.2e-29 Score=246.88 Aligned_cols=253 Identities=15% Similarity=0.200 Sum_probs=201.1
Q ss_pred cCCCCCeEEEEecc-CCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeC---CCEEEEEeCCCcEEEEeCC
Q 010669 220 KTSKPGIVSLDIHY-SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE---GDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 220 ~~~~~~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~s~dg~i~iwd~~ 295 (504)
..|...|.+++|+| ++.+|++++.||.|++||+.+++....+. +...+.++.|++. +.++++++.||.|++||+.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 35889999999999 77899999999999999999998888776 7788999999984 4499999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCe-EEEEeec----------CCCCCCCCCeEEE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGI-CLTQVSD----------AGTDGRPEGYTSA 363 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~-~~~~~~~----------~~~~~~~~~v~~~ 363 (504)
++ .....+..|...|.+++|+|+++ .|++++.||.|++||++++. ....+.. .....|...|.++
T Consensus 175 ~~---~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 175 SG---SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SS---CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred Cc---ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 75 56777889999999999999998 58999999999999998765 3333211 0113677899999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----CCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeee
Q 010669 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV-----GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 364 ~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-----~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~ 437 (504)
+|+|++.+|++++.||.|++||+++++....+..+. ..+........+..+++++.++ |++||+.+++.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 999999999999999999999999987665543321 1222222223344455555566 9999999999988887
Q ss_pred cCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEc
Q 010669 438 SSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 438 ~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~ 482 (504)
.+ ...|.+++|+|++++|++++.| |++|++ ...+.+...
T Consensus 332 ~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~----~~~~~~~~~ 372 (408)
T 4a11_B 332 GH--YKTVDCCVFQSNFQELYSGSRDCNILAWVP----SLYEPVPDD 372 (408)
T ss_dssp CC--SSCEEEEEEETTTTEEEEEETTSCEEEEEE----CC-------
T ss_pred cC--CCeEEEEEEcCCCCEEEEECCCCeEEEEeC----CCCCccCCC
Confidence 65 6799999999999999999998 999999 444544443
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-30 Score=260.86 Aligned_cols=196 Identities=11% Similarity=0.064 Sum_probs=165.3
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCcc-----ceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK-----KVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-----~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
.|.+.|.+++|||+|.+||+++.||.|++||... ++..+. |.. .|.+++|||||++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5678999999999999999999999999999643 677777 665 49999999999999999999999999998
Q ss_pred CCCC----cceeEEe----ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEE---EEeecCCCCCCCCCeEEEE
Q 010669 296 EDGN----YDCKHTL----KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL---TQVSDAGTDGRPEGYTSAA 364 (504)
Q Consensus 296 ~~~~----~~~~~~~----~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~v~~~~ 364 (504)
++.. +..+.++ .+|...|.+++|+|+| +++++.|++|++||+.++... ..+. .+|...|.+++
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~----~~h~~~V~sva 233 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ----NASRRKITDLK 233 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE----CCCSSCCCCEE
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec----ccccCcEEEEE
Confidence 7521 1135665 6788899999999999 888999999999999887732 3332 15667899999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEE--cCCCcEEEEEeCCcEEEEEcC
Q 010669 365 FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF--SENGYYLATAAHDGVKLWDLR 428 (504)
Q Consensus 365 ~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~--s~~g~~l~s~~~d~v~vwd~~ 428 (504)
|+ |..+++++ +|.|++||+.+++......+|...|..+.| +|++..|++++++|.++|...
T Consensus 234 Fs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d 296 (588)
T 2j04_A 234 IV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLED 296 (588)
T ss_dssp EE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESS
T ss_pred EE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeec
Confidence 99 68888887 699999999887774444479999999999 999999999998877999875
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.1e-28 Score=245.03 Aligned_cols=259 Identities=12% Similarity=0.074 Sum_probs=218.7
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEE-----EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT-----TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~-----~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..+.+++|+|++.++++++.++.|++||+.+++... .+.+|.+.|.+++|++++.++++++.|+.|++||+.++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~- 201 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL- 201 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc-
Confidence 346689999977888888889999999999998887 45588899999999999999999999999999999875
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEE-eCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTA-SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT- 376 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~- 376 (504)
.....+..|...+.+++|+|++++++++ +.|+.|++||+++++....+.. ...+.+++|+|+|+++++++
T Consensus 202 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 202 --AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK------IGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp --CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC------CSEEEEEEECTTSSEEEEEEE
T ss_pred --eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC------CCCceEEEEcCCCCEEEEEEC
Confidence 5667777889999999999999988554 4799999999999988776642 24589999999999999887
Q ss_pred -------CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEE-EEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeE
Q 010669 377 -------SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL-ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNS 447 (504)
Q Consensus 377 -------~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l-~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~ 447 (504)
.||.|++||+++++.+..+. |...+.+++|+|+|.++ ++++.++ |++||+.+++....+.. ...+.+
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~ 349 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV---FDKPNT 349 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC---CCCCCe
Confidence 58899999999988776653 56689999999999755 5556777 99999999888777753 467999
Q ss_pred EEECCCCCEEEEEeC---------------c--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 448 VDFDHSGSYLAVASA---------------D--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 448 i~~~~~g~~l~~~~~---------------d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
++|+|+|++|++++. | +++||+ .+++.+..+..+ ..+.+++|+|+|+.
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~----~~~~~~~~~~~~---~~~~~~~~s~dg~~ 414 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT----TTDTVKEFWEAG---NQPTGLDVSPDNRY 414 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET----TTTEEEEEEECS---SSEEEEEECTTSCE
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC----CCCcEEEEecCC---CCCceEEEcCCCCE
Confidence 999999999988876 3 889997 667888888763 57899999999864
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8e-29 Score=242.83 Aligned_cols=234 Identities=21% Similarity=0.276 Sum_probs=196.6
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEE--eeCCCEEEEEeCCCcEEEEeCC
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF--VTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~--s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
....|...|.+++|+|++++|++|+.||.|++||+.+++.+. +.+|...|++++| ++++.+|++++.||.|++||+.
T Consensus 81 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred EeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 456789999999999999999999999999999999888766 5569999999999 7899999999999999999998
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE----
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI---- 371 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~---- 371 (504)
++ .....+..|. .+.++.+. +..+++++.++.+.+||++........... .+...+.++.+.+++..
T Consensus 160 ~~---~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T 3mmy_A 160 SS---NPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIES---PLKHQHRCVAIFKDKQNKPTG 230 (368)
T ss_dssp CS---SCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCC---SCSSCEEEEEEEECTTSCEEE
T ss_pred CC---cEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccc---cccCCCceEEEcccCCCCCCe
Confidence 76 5556666553 56666665 568899999999999999987655444322 33445666666665543
Q ss_pred EEEEeCCCcEEEEEcCCC---ceeeeeeCCCC------------CeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceee
Q 010669 372 LGTGTSEALVKIWDVKSQ---ANVAKFDGHVG------------AVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435 (504)
Q Consensus 372 l~~g~~dg~I~iwd~~~~---~~~~~~~~~~~------------~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~ 435 (504)
+++|+.||.|++||++.. ..+..+.+|.. .|++++|+|++.+|++++.|+ |++||+++++.+..
T Consensus 231 ~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 231 FALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp EEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE
Confidence 999999999999999887 56777777765 799999999999999999999 99999999998888
Q ss_pred eecCCCCCCeeEEEECCCCCEEEEEeCc
Q 010669 436 FESSDSETPTNSVDFDHSGSYLAVASAD 463 (504)
Q Consensus 436 ~~~~~~~~~v~~i~~~~~g~~l~~~~~d 463 (504)
+..+ ...|.+++|+|+|.+|++++.|
T Consensus 311 ~~~~--~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 311 SEQL--DQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp CCCC--SSCEEEEEECTTSSCEEEEECC
T ss_pred ecCC--CCCceEEEECCCCCeEEEEecc
Confidence 8765 6799999999999999999886
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.6e-27 Score=232.52 Aligned_cols=243 Identities=14% Similarity=0.133 Sum_probs=202.7
Q ss_pred CCeEEEEeccCCCEE-EEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCCCcc
Q 010669 224 PGIVSLDIHYSKDVI-ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~~~~ 301 (504)
..+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|+ +++.++.|++||+.++ .
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~ 107 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---T 107 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---E
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC---e
Confidence 458999999999976 677789999999999999988887665 899999999999775 4556799999999875 5
Q ss_pred eeEEeccCCcCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE-EEEeCCC
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYF-VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL-GTGTSEA 379 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l-~~g~~dg 379 (504)
....+..| ..+.+++|+|+++++ ++++.|+.|++||+.+++....+.. ...+.+++|+|+|+.+ ++++.++
T Consensus 108 ~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 108 VAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV------GRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------CSSEEEEEECTTSSEEEEEETTTT
T ss_pred EEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec------CCCcceEEECCCCCEEEEEeCCCC
Confidence 55555544 568999999999977 6788899999999999988877752 2457999999999877 5778899
Q ss_pred cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe---CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC
Q 010669 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA---HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455 (504)
Q Consensus 380 ~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~---~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~ 455 (504)
.|++||+++++.+..+. +...+.+++|+|+|.+|++++ .++ |++||+.+++.+..+..+ ..+.+++|+|+|+
T Consensus 181 ~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG---PDPAGIAVTPDGK 256 (391)
T ss_dssp EEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC---SSEEEEEECTTSS
T ss_pred EEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC---CCccEEEEccCCC
Confidence 99999999998887776 456899999999999998887 456 999999999888877764 4588999999999
Q ss_pred EEE-EEeCc--EEEEEeeccCccceeEEEccCC
Q 010669 456 YLA-VASAD--IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 456 ~l~-~~~~d--i~vw~~~~~~~~~~~i~~~~~h 485 (504)
+|+ +++.+ +++||+ .+++.+..+..|
T Consensus 257 ~l~~s~~~d~~v~v~d~----~~~~~~~~~~~~ 285 (391)
T 1l0q_A 257 KVYVALSFXNTVSVIDT----ATNTITATMAVG 285 (391)
T ss_dssp EEEEEETTTTEEEEEET----TTTEEEEEEECS
T ss_pred EEEEEcCCCCEEEEEEC----CCCcEEEEEECC
Confidence 885 44555 999998 667888877766
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=8.9e-28 Score=226.81 Aligned_cols=236 Identities=16% Similarity=0.187 Sum_probs=177.9
Q ss_pred eEEEEeccCCC---EEEEEeCCCcEEEEcCCCC---ceEEEcccCcc-------------------------ceeEEEEe
Q 010669 226 IVSLDIHYSKD---VIATGGVDTNAVLFDRPSG---QIVTTLSGHSK-------------------------KVTSVKFV 274 (504)
Q Consensus 226 I~~~~~s~~~~---~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~-------------------------~v~~l~~s 274 (504)
+.++-|-..|- .+++++. ..|++|+..++ +.+.++..|.. .|..++|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55566655443 6777764 58999999888 77777777664 45677778
Q ss_pred eC----CCEEEEEeC--------------------CCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc---CCCEEEE
Q 010669 275 TE----GDLFLTGSA--------------------DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA---TNKYFVT 327 (504)
Q Consensus 275 ~~----~~~l~s~s~--------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p---~~~~l~s 327 (504)
|+ +.++++++. |+.|++|++...+ +.+..+.+|...+..++|+| ++.+|++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--~~~~s~~~~~~~v~~l~fs~~~g~~~~LaS 198 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--GGKENQFLMPPEETILTFAEVQGMQEALLG 198 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS--CEEEEEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC--ceeeeeccCCCceeeEEeeccCCCCceEEE
Confidence 88 777777553 8888899885533 56666778888888899988 6789999
Q ss_pred EeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE------------EEEeCCCcEEEEEcCCCceeeee
Q 010669 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL------------GTGTSEALVKIWDVKSQANVAKF 395 (504)
Q Consensus 328 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l------------~~g~~dg~I~iwd~~~~~~~~~~ 395 (504)
++.|++|++||+.+++.+..+... ..+...+.+++|+|+|.++ ++|+.|++|++||..+++.+..+
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 999999999999999999988632 1223468889999999886 56788999999999999887665
Q ss_pred -----eCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEE
Q 010669 396 -----DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVY 467 (504)
Q Consensus 396 -----~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw 467 (504)
.+|...+.+..+ ++.++++++.|+ |+|||+.+++++.++..+. ...+..++|+|+|++|++|+.| |+||
T Consensus 277 ~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~-~~vvs~vafSPDG~~LaSGS~D~TIklW 353 (356)
T 2w18_A 277 LYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVS-DQHWSFVKWSGTDSHLLAGQKDGNIFVY 353 (356)
T ss_dssp EECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC---CCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred EeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCC-CCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 367666555555 488999999998 9999999999999987652 2334568999999999999999 9999
Q ss_pred Ee
Q 010669 468 QV 469 (504)
Q Consensus 468 ~~ 469 (504)
++
T Consensus 354 d~ 355 (356)
T 2w18_A 354 HY 355 (356)
T ss_dssp EE
T ss_pred cC
Confidence 96
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-28 Score=264.96 Aligned_cols=237 Identities=18% Similarity=0.237 Sum_probs=192.8
Q ss_pred EEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccC--CCEEEEEeCCCeEE
Q 010669 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT--NKYFVTASLDNTWC 335 (504)
Q Consensus 258 ~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~l~s~s~dg~i~ 335 (504)
+..+.+|.+.|++++|+|++++|++|+.||+|++||+..+ .......+.+|.+.|.+++|+|+ +++|++|+.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3467899999999999999999999999999999998742 33677788899999999999988 99999999999999
Q ss_pred EEECCCCeEEEEeecCCCCCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcC--
Q 010669 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD--GLILGTGTSEALVKIWDVKSQA--NVAKFDGHVGAVTAISFSE-- 409 (504)
Q Consensus 336 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd--g~~l~~g~~dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~-- 409 (504)
+||+.++....... ..+|...|++++|+|+ +.++++|+.||.|++||++++. ....+.+|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 81 IWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred EEECCCCccccccc---ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999987322222 1267789999999999 9999999999999999998873 4456678999999999999
Q ss_pred -----------CCcEEEEEeCCc-EEEEEcCCCcc----eeeeecCCCCCCeeEEEECCC---CCEEEEEeCc--EEEEE
Q 010669 410 -----------NGYYLATAAHDG-VKLWDLRKLKN----FRSFESSDSETPTNSVDFDHS---GSYLAVASAD--IRVYQ 468 (504)
Q Consensus 410 -----------~g~~l~s~~~d~-v~vwd~~~~~~----~~~~~~~~~~~~v~~i~~~~~---g~~l~~~~~d--i~vw~ 468 (504)
++.+|++|+.|+ |++||++++.. ...+.. |...|.+++|+|+ +.+|++++.| |++|+
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 589999999998 99999988743 334443 3789999999999 8999999998 99999
Q ss_pred eeccCccce-eEEEccCCCCCCceeEEEEeecCcc
Q 010669 469 VASVKADWN-CIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 469 ~~~~~~~~~-~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+......+. .+.....| .+.|++++|+|+|+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~--~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKF--PDVLWRASWSLSGNV 268 (753)
T ss_dssp ESSSSSCCBCCBSSSSCC--SSCCCCEEECTTTCC
T ss_pred CCCCCCcceeEEeccCCC--CCceEEEEEcCCCCE
Confidence 955322111 33333445 789999999999864
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=6.7e-27 Score=231.93 Aligned_cols=245 Identities=13% Similarity=0.132 Sum_probs=204.7
Q ss_pred CEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEE-EEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeE
Q 010669 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF-LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314 (504)
Q Consensus 236 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 314 (504)
.++++++.|+.|++||+.+++.+..+..|.. +.+++|+|+++++ ++++.|+.|++||+.++ +....+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN---NVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTT---EEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCC---eEEEEEECCC-Ccc
Confidence 4678899999999999999999998887754 8999999999976 67779999999999875 5666665554 899
Q ss_pred EEEEccCCCEEEEE-eCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCcee
Q 010669 315 AVTVHATNKYFVTA-SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL-GTGTSEALVKIWDVKSQANV 392 (504)
Q Consensus 315 ~l~~~p~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l-~~g~~dg~I~iwd~~~~~~~ 392 (504)
+++|+|++++++++ +.++.|++||+.+++....+.. ...+.+++|+|+|+.+ ++++.++.|++||+++++.+
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 99999999987654 5679999999999988877652 2468999999999977 67888999999999999988
Q ss_pred eeeeCCCCCeEEEEEcCCCcEE-EEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEe---Cc--EE
Q 010669 393 AKFDGHVGAVTAISFSENGYYL-ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS---AD--IR 465 (504)
Q Consensus 393 ~~~~~~~~~i~~l~~s~~g~~l-~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~---~d--i~ 465 (504)
..+..+ ..+.+++|+|+|.+| ++++.++ |++||+++++....+.. ...+.+++|+|+|++|++++ .+ ++
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec---CCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 888765 467999999999887 5566667 99999999888777764 35789999999999999887 34 99
Q ss_pred EEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 466 VYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 466 vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+||+ .+++.+..+..| ..+.++.|+|+|+.
T Consensus 228 ~~d~----~~~~~~~~~~~~---~~~~~~~~s~dg~~ 257 (391)
T 1l0q_A 228 MIDT----GTNKITARIPVG---PDPAGIAVTPDGKK 257 (391)
T ss_dssp EEET----TTTEEEEEEECC---SSEEEEEECTTSSE
T ss_pred EEEC----CCCeEEEEEecC---CCccEEEEccCCCE
Confidence 9998 667788888776 35789999999863
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-28 Score=237.06 Aligned_cols=229 Identities=11% Similarity=0.121 Sum_probs=178.8
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCC---------CCceEEEcc-cCccceeEEEEee--CCCEEEEEeCCCcEEE
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRP---------SGQIVTTLS-GHSKKVTSVKFVT--EGDLFLTGSADKTVRV 291 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~---------~~~~~~~~~-~h~~~v~~l~~s~--~~~~l~s~s~dg~i~i 291 (504)
..|.++.|+|+ +++|+.|++|++|+.. +++.+..+. +|.+.|.+++|+| +++++++|+.||+|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45667778887 9999999999999655 455444443 6778999999999 9999999999999999
Q ss_pred EeCCCCCCcceeEEe-ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEE-EEeecCCCCCCCCCeEEEEECCCC
Q 010669 292 WQGSEDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL-TQVSDAGTDGRPEGYTSAAFHPDG 369 (504)
Q Consensus 292 wd~~~~~~~~~~~~~-~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~pdg 369 (504)
||+.++ ...... ..|...|.+++|+|++.+|++|+.||.|++||+++++.. ..+.. +|...|++++|+|+|
T Consensus 154 wd~~~~---~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~----~h~~~v~~l~fs~~g 226 (343)
T 3lrv_A 154 QSYEDD---SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV----DEEAKIKEVKFADNG 226 (343)
T ss_dssp EESSSS---CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC----CTTSCEEEEEECTTS
T ss_pred EECCCC---cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec----cCCCCEEEEEEeCCC
Confidence 999875 344444 345668999999999999999999999999999998876 55531 378899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeeC---CCCCeE--EEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcceeeeecCCCC
Q 010669 370 LILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVT--AISFSENGYYLATAAH-DG-VKLWDLRKLKNFRSFESSDSE 442 (504)
Q Consensus 370 ~~l~~g~~dg~I~iwd~~~~~~~~~~~~---~~~~i~--~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~~~~~~~~~~~ 442 (504)
.+|++++ ++.|++||+++++.+..+.. |...+. +++|+|+|.+|++++. ++ |++|++.+.......
T Consensus 227 ~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~------ 299 (343)
T 3lrv_A 227 YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK------ 299 (343)
T ss_dssp SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE------
T ss_pred CEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe------
Confidence 9999999 55999999999877665543 434444 6999999999999887 76 999999765543322
Q ss_pred CCeeEEEECC---CCCEEEEEeCc--EEEEEe
Q 010669 443 TPTNSVDFDH---SGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 443 ~~v~~i~~~~---~g~~l~~~~~d--i~vw~~ 469 (504)
.++..+.|.+ ++..+++++.| +.++-.
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 300 DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 3567788888 88888888877 655543
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.4e-28 Score=244.67 Aligned_cols=221 Identities=12% Similarity=0.078 Sum_probs=160.5
Q ss_pred EEeeCCCEEEEEeCCCcEEEEeCCCCCC--cceeEEeccCCcCeEEEEEcc--------CCCEEEEEeCCCeEEEEECCC
Q 010669 272 KFVTEGDLFLTGSADKTVRVWQGSEDGN--YDCKHTLKDHTAEVQAVTVHA--------TNKYFVTASLDNTWCFYDLSS 341 (504)
Q Consensus 272 ~~s~~~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~~p--------~~~~l~s~s~dg~i~iwd~~~ 341 (504)
.+.+++.+|++|+.|++|++||...+.. ......+.+|.+.|++++|+| ++++|++|+.|++|++||+++
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3345667899999999999999887521 122344679999999999998 789999999999999999998
Q ss_pred CeEEEEeecCCCCCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCceeee-------------------------e
Q 010669 342 GICLTQVSDAGTDGRPEGYTSAAFHPDG-LILGTGTSEALVKIWDVKSQANVAK-------------------------F 395 (504)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~pdg-~~l~~g~~dg~I~iwd~~~~~~~~~-------------------------~ 395 (504)
+....... .|...+.+++|+|++ .+|++|+.||.|++||+++++.... .
T Consensus 176 ~~~~~~~~-----~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 176 EGPILAGY-----PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp TEEEEEEE-----ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred Cceeeeec-----CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 88776665 556789999999987 5899999999999999988754322 1
Q ss_pred eCCCCCeEEEEEc-CCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCC----------------CCCeeEEEECC--CCC
Q 010669 396 DGHVGAVTAISFS-ENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS----------------ETPTNSVDFDH--SGS 455 (504)
Q Consensus 396 ~~~~~~i~~l~~s-~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~----------------~~~v~~i~~~~--~g~ 455 (504)
.+|...+.++.|+ ++|..|++++.|+ +++||+..++....+..+.. ........|+| ++.
T Consensus 251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY 330 (393)
T ss_dssp -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTE
T ss_pred ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCE
Confidence 3567789999987 7999999999998 99999987765544432210 11112233333 334
Q ss_pred EEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCccc
Q 010669 456 YLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQTC 503 (504)
Q Consensus 456 ~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~~ 503 (504)
++++|+.| |++||+ .++..+..+.+| ...|.+++|+|+|+..
T Consensus 331 ~~~sgs~Dg~V~lwd~----~~~~~~~~~~~~--~~~V~svafspdG~~L 374 (393)
T 4gq1_A 331 FATAHSQHGLIQLINT----YEKDSNSIPIQL--GMPIVDFCWHQDGSHL 374 (393)
T ss_dssp EEEEETTTTEEEEEET----TCTTCCEEEEEC--SSCEEEEEECTTSSEE
T ss_pred EEEEECCCCEEEEEEC----CCCcEEEEecCC--CCcEEEEEEcCCCCEE
Confidence 56667777 999998 556667777777 7799999999999753
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=7.7e-28 Score=227.23 Aligned_cols=201 Identities=12% Similarity=0.092 Sum_probs=158.6
Q ss_pred CCCCeEEEEeccC----CCEEEEEeC--------------------CCcEEEEcC-CCCceEEEcccCccceeEEEEee-
Q 010669 222 SKPGIVSLDIHYS----KDVIATGGV--------------------DTNAVLFDR-PSGQIVTTLSGHSKKVTSVKFVT- 275 (504)
Q Consensus 222 ~~~~I~~~~~s~~----~~~l~sg~~--------------------dg~i~vwd~-~~~~~~~~~~~h~~~v~~l~~s~- 275 (504)
+...|.+++|+|+ +.++++++. |+.|++|++ .+++.+..+.+|...++.++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 3447889999999 777777653 888999998 55888888888999999999998
Q ss_pred --CCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCC---cCeEEEEEccCCCEE------------EEEeCCCeEEEEE
Q 010669 276 --EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT---AEVQAVTVHATNKYF------------VTASLDNTWCFYD 338 (504)
Q Consensus 276 --~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~---~~v~~l~~~p~~~~l------------~s~s~dg~i~iwd 338 (504)
++.+|++|+.|++|+|||+.++ ++++++.+|. ..+.+++|+|+|.++ ++|+.|++|++||
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TG---k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTG---QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTC---CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred CCCCceEEEecCCCcEEEEECCCC---cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 6789999999999999999987 6778887643 467888999999876 5678899999999
Q ss_pred CCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeE-EEEEcCCCcEEEEE
Q 010669 339 LSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT-AISFSENGYYLATA 417 (504)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~-~l~~s~~g~~l~s~ 417 (504)
..+++.+..+......+|...+.+..++ +.++++|+.||+|+|||+.+++.+.++.+|...+. +++|+|||.+|++|
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 9999887665321122454444444444 88999999999999999999999999999887655 68999999999999
Q ss_pred eCCc-EEEEEc
Q 010669 418 AHDG-VKLWDL 427 (504)
Q Consensus 418 ~~d~-v~vwd~ 427 (504)
+.|+ |+|||+
T Consensus 345 S~D~TIklWd~ 355 (356)
T 2w18_A 345 QKDGNIFVYHY 355 (356)
T ss_dssp CTTSCEEEEEE
T ss_pred ECCCcEEEecC
Confidence 9998 999996
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.4e-26 Score=232.94 Aligned_cols=236 Identities=14% Similarity=0.139 Sum_probs=203.2
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDG 298 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~ 298 (504)
..|...|.+++|++++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+.++
T Consensus 166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~- 244 (433)
T 3bws_A 166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK- 244 (433)
T ss_dssp HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-
T ss_pred cccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-
Confidence 46788999999999999999999999999999999999999989999999999999999875 5558999999999875
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEe--------CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTAS--------LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
.....+..+ ..+.+++|+|+++++++++ .||.|++||+.+++....+. +...+.+++|+|+++
T Consensus 245 --~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~------~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 245 --LEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG------PPGNKRHIVSGNTEN 315 (433)
T ss_dssp --EEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE------EEECEEEEEECSSTT
T ss_pred --cEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc------CCCCcceEEECCCCC
Confidence 555666544 5599999999999999988 58899999999998776653 234688999999997
Q ss_pred -EEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeC---------------Cc-EEEEEcCCCcce
Q 010669 371 -ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAH---------------DG-VKLWDLRKLKNF 433 (504)
Q Consensus 371 -~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~---------------d~-v~vwd~~~~~~~ 433 (504)
++++++.++.|++||+.+++.+..+. +...+.+++|+|+|.+|++++. |+ |++||+.+++.+
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 45667899999999999988887776 6678999999999998888876 45 999999999888
Q ss_pred eeeecCCCCCCeeEEEECCCCCEEEEEeC-c--EEEEEe
Q 010669 434 RSFESSDSETPTNSVDFDHSGSYLAVASA-D--IRVYQV 469 (504)
Q Consensus 434 ~~~~~~~~~~~v~~i~~~~~g~~l~~~~~-d--i~vw~~ 469 (504)
..+.. ...+.+++|+|+|++|++++. | +++|++
T Consensus 395 ~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 395 EFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEecC---CCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 87765 357899999999999998875 5 999998
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.1e-25 Score=220.56 Aligned_cols=211 Identities=12% Similarity=0.162 Sum_probs=158.1
Q ss_pred EEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEE-EE
Q 010669 249 LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF-VT 327 (504)
Q Consensus 249 vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l-~s 327 (504)
+|++.+.+.+..+..|...|++++|+|+|++|++|+.+| +++||.... ...... +...+..+.+.++++.+ ++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV---AHIMSQ--EMRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE---EEEEEE--ECSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc---ceeeee--ecCCeEEEEEcCCCCEEEEE
Confidence 466666777777889999999999999999999988775 789998753 333322 22347788888888877 56
Q ss_pred EeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-----------------------------------CEE
Q 010669 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-----------------------------------LIL 372 (504)
Q Consensus 328 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-----------------------------------~~l 372 (504)
++.|++|++||+.+++.+..+. +...|.+++|+++. .++
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~l 150 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIK------VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLL 150 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEE------CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEE
T ss_pred ECCccEEEEEECCCCcEEEEEE------CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEE
Confidence 7788999999999999888774 23467777777643 234
Q ss_pred EE--EeCCCcEEEEEcCCCc----------------eeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc--EEEEEcCCCcc
Q 010669 373 GT--GTSEALVKIWDVKSQA----------------NVAKFDGHVGAVTAISFSENGYYLATAAHDG--VKLWDLRKLKN 432 (504)
Q Consensus 373 ~~--g~~dg~I~iwd~~~~~----------------~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~--v~vwd~~~~~~ 432 (504)
++ |+.||.|++||++++. .+..+.+|.+.|++++|+|+|.+|++|+.|+ |++||+++++.
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 44 5788999999998765 2678899999999999999999999999996 99999999999
Q ss_pred eeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeec
Q 010669 433 FRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 433 ~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
+..+....+...|.+++|+|+|++|++++.| ++||++..
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 9888732236899999999999999999998 99999854
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=3.1e-24 Score=214.66 Aligned_cols=242 Identities=13% Similarity=0.113 Sum_probs=190.8
Q ss_pred CCEEEEEeCC------CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCC---cEEEEeCCCCCCcceeEE
Q 010669 235 KDVIATGGVD------TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK---TVRVWQGSEDGNYDCKHT 305 (504)
Q Consensus 235 ~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~ 305 (504)
+..++.++.+ +.|++||+. +.....+.+|...|.+++|+|+|++|++++.++ .|++||+.++ .. ..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg---~~-~~ 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG---AV-RQ 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---CE-EE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC---cE-EE
Confidence 5555555543 799999997 445677778999999999999999999999885 9999999875 33 34
Q ss_pred eccCCcCeEEEEEccCCCEEE-EEeCCCe--EEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC-CC--
Q 010669 306 LKDHTAEVQAVTVHATNKYFV-TASLDNT--WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS-EA-- 379 (504)
Q Consensus 306 ~~~h~~~v~~l~~~p~~~~l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~-dg-- 379 (504)
+..|...+.+++|+|+|++|+ +++.|+. |++||+.+++.. .+. .+...+.+++|+|||+.|++++. +|
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~-----~~~~~~~~~~~spdg~~l~~~s~~~g~~ 291 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT-----DGRSNNTEPTWFPDSQNLAFTSDQAGRP 291 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC-----CCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc-----CCCCcccceEECCCCCEEEEEECCCCCc
Confidence 567888999999999999887 6666654 999999988753 332 45568999999999998888876 44
Q ss_pred cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC---c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC
Q 010669 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD---G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455 (504)
Q Consensus 380 ~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d---~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~ 455 (504)
.|++||+.+++. ..+..+...+.+++|+|+|++|++++.+ . |++||+.+++.. .+..+ ..+.+++|+|+|+
T Consensus 292 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~---~~~~~~~~spdg~ 366 (415)
T 2hqs_A 292 QVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST---FLDETPSLAPNGT 366 (415)
T ss_dssp EEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS---SSCEEEEECTTSS
T ss_pred EEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC---CCcCCeEEcCCCC
Confidence 688889887764 3445566789999999999999988764 3 999999987763 33332 3789999999999
Q ss_pred EEEEEeCc-----EEEEEeeccCccceeEEEccCCCCCCceeEEEEeec
Q 010669 456 YLAVASAD-----IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVL 499 (504)
Q Consensus 456 ~l~~~~~d-----i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~ 499 (504)
+|++++.+ +.+|++ .+.....+.+| .+.|.+++|+|.
T Consensus 367 ~l~~~s~~~~~~~l~~~d~-----~g~~~~~l~~~--~~~v~~~~~~~~ 408 (415)
T 2hqs_A 367 MVIYSSSQGMGSVLNLVST-----DGRFKARLPAT--DGQVKFPAWSPY 408 (415)
T ss_dssp EEEEEEEETTEEEEEEEET-----TSCCEEECCCS--SSEEEEEEECCC
T ss_pred EEEEEEcCCCccEEEEEEC-----CCCcEEEeeCC--CCCCcCCccccc
Confidence 99988765 555564 35667888888 889999999985
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.5e-24 Score=216.93 Aligned_cols=257 Identities=12% Similarity=0.106 Sum_probs=199.0
Q ss_pred CCeEEEEeccCCC-EEEEEe----CCC----cEEEEcC--CCCceE--EEcccCccceeEEEEee--------------C
Q 010669 224 PGIVSLDIHYSKD-VIATGG----VDT----NAVLFDR--PSGQIV--TTLSGHSKKVTSVKFVT--------------E 276 (504)
Q Consensus 224 ~~I~~~~~s~~~~-~l~sg~----~dg----~i~vwd~--~~~~~~--~~~~~h~~~v~~l~~s~--------------~ 276 (504)
..+...+|++.|. ++++|+ .+| .+++||+ .+++.+ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 3566778888775 666776 467 8999999 888877 45888988888877764 1
Q ss_pred CCEEEEEeCC------CcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC---eEEEEECCCCeEEEE
Q 010669 277 GDLFLTGSAD------KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN---TWCFYDLSSGICLTQ 347 (504)
Q Consensus 277 ~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg---~i~iwd~~~~~~~~~ 347 (504)
+..++.++.+ +.|++||+.. .....+..|...+.+++|+|+|++|++++.++ .|++||+.+++...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g----~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~- 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG----YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ- 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS----CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC----CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-
Confidence 5556655543 7999999975 34566778899999999999999999999885 99999999988754
Q ss_pred eecCCCCCCCCCeEEEEECCCCCEEE-EEeCCCc--EEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c--
Q 010669 348 VSDAGTDGRPEGYTSAAFHPDGLILG-TGTSEAL--VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G-- 421 (504)
Q Consensus 348 ~~~~~~~~~~~~v~~~~~~pdg~~l~-~g~~dg~--I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-- 421 (504)
+. .+...+.+++|+|||+.|+ +++.+|. |++||+.+++. ..+..|...+.+++|+|||++|++++.+ +
T Consensus 218 l~-----~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~ 291 (415)
T 2hqs_A 218 VA-----SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRP 291 (415)
T ss_dssp EE-----CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred ee-----cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCc
Confidence 32 3456799999999999887 6666554 99999988765 5666788899999999999999888763 3
Q ss_pred -EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-----EEEEEeeccCccceeEEEccCCCCCCceeEEE
Q 010669 422 -VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-----IRVYQVASVKADWNCIKTFPDLSGTGAASFLF 495 (504)
Q Consensus 422 -v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-----i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~ 495 (504)
|++||+.+++. ..+..+ ...+.+++|+|+|++|++++.+ |.+|++ .+++. ..+..| . .+.++.
T Consensus 292 ~i~~~d~~~~~~-~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~----~~~~~-~~l~~~--~-~~~~~~ 360 (415)
T 2hqs_A 292 QVYKVNINGGAP-QRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL----ATGGV-QVLSST--F-LDETPS 360 (415)
T ss_dssp EEEEEETTSSCC-EECCCS--SSEEEEEEECTTSSEEEEEEECSSCEEEEEEET----TTCCE-EECCCS--S-SCEEEE
T ss_pred EEEEEECCCCCE-EEEecC--CCcccCeEECCCCCEEEEEECcCCceEEEEEEC----CCCCE-EEecCC--C-CcCCeE
Confidence 78889987764 333332 4578899999999999988752 888887 33443 456565 3 789999
Q ss_pred EeecCcc
Q 010669 496 LFVLGQT 502 (504)
Q Consensus 496 ~~~~g~~ 502 (504)
|+|+|+.
T Consensus 361 ~spdg~~ 367 (415)
T 2hqs_A 361 LAPNGTM 367 (415)
T ss_dssp ECTTSSE
T ss_pred EcCCCCE
Confidence 9999974
No 129
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=4.5e-23 Score=201.09 Aligned_cols=260 Identities=12% Similarity=0.081 Sum_probs=207.9
Q ss_pred CCCeEEEEeccCCCEEEEEeC-------CCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEE-EEeCCCcEEEEeC
Q 010669 223 KPGIVSLDIHYSKDVIATGGV-------DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQG 294 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~-------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~ 294 (504)
...+..++|+|+++++++++. ++.|.+||..+++.+..+... ..+..++|+|++++++ ++..++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 346789999999998888774 568999999999988887643 4578899999999554 5556799999999
Q ss_pred CCCCCcceeEEeccCCc---------CeEEEEEccCCCEEEEEe--CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEE
Q 010669 295 SEDGNYDCKHTLKDHTA---------EVQAVTVHATNKYFVTAS--LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h~~---------~v~~l~~~p~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 363 (504)
.++ +....+..+.. .+.++.|+|+++++++++ .++.|.+||+.+++....+.. +...+.++
T Consensus 119 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~ 190 (353)
T 3vgz_A 119 KTG---EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-----TGKMSTGL 190 (353)
T ss_dssp TTC---CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-----CCTTCCCC
T ss_pred CCC---eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-----CCCccceE
Confidence 875 44455544332 278899999999887776 478999999999988877641 22347889
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeC----CCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeee
Q 010669 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG----HVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 364 ~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~----~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~ 437 (504)
+|+|+|+.+++++.++.|.+||+.+++.+..+.. +...+..++|+|+|.++++++.+ + |.+||+.+++.+..+.
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9999999999999999999999999988877654 45578899999999988777765 5 9999999998888777
Q ss_pred cCCCCCCeeEEEECCCCCEEEEEeC-c--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 438 SSDSETPTNSVDFDHSGSYLAVASA-D--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 438 ~~~~~~~v~~i~~~~~g~~l~~~~~-d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
... ...++|+|+|+++++++. + +.+||. .+++.+..+.. ...+.+++|+++|+.
T Consensus 271 ~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~----~~~~~~~~~~~---~~~~~~~~~s~dg~~ 327 (353)
T 3vgz_A 271 APE----SLAVLFNPARNEAYVTHRQAGKVSVIDA----KSYKVVKTFDT---PTHPNSLALSADGKT 327 (353)
T ss_dssp CSS----CCCEEEETTTTEEEEEETTTTEEEEEET----TTTEEEEEEEC---CSEEEEEEECTTSCE
T ss_pred cCC----CceEEECCCCCEEEEEECCCCeEEEEEC----CCCeEEEEEec---CCCCCeEEEcCCCCE
Confidence 542 256999999998777664 3 999997 66778887765 347899999999973
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=5.1e-23 Score=199.62 Aligned_cols=270 Identities=14% Similarity=0.211 Sum_probs=191.9
Q ss_pred CCCCeEEEEeccCCCEEEEEeCC-CcEEEEcCC--CCc--eEEEcccCccceeEEEEeeCCCEEEEEeC-CCcEEEEeCC
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVD-TNAVLFDRP--SGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTGSA-DKTVRVWQGS 295 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~d-g~i~vwd~~--~~~--~~~~~~~h~~~v~~l~~s~~~~~l~s~s~-dg~i~iwd~~ 295 (504)
+...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+.+++|+|++++|++++. ++.|.+||+.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 45678899999999988888876 999999987 554 344555444 7899999999998776664 8899999995
Q ss_pred CCCCcceeEEeccCCcCeEEEEEccCCCEEEEEe-CCCeEEEEECCC-CeEEEEe--ecCCCCCCCCCeEEEEECCCCCE
Q 010669 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS-LDNTWCFYDLSS-GICLTQV--SDAGTDGRPEGYTSAAFHPDGLI 371 (504)
Q Consensus 296 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s-~dg~i~iwd~~~-~~~~~~~--~~~~~~~~~~~v~~~~~~pdg~~ 371 (504)
.+........+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++..... ... . .....+.+++|+|+|++
T Consensus 115 ~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 115 DGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT-T-VEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp TTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE-C-STTCCEEEEEECTTSSE
T ss_pred CCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc-c-CCCCCcceEEECCCCCE
Confidence 32222344444433 4588999999999888887 899999999987 6443221 110 0 12246889999999997
Q ss_pred EEEE-eCCCcEEEEEcCC--Cce--eeeee----CC--CCCeEEEEEcCCCcEEEEEe-CCc-EEEEEcCC----Cccee
Q 010669 372 LGTG-TSEALVKIWDVKS--QAN--VAKFD----GH--VGAVTAISFSENGYYLATAA-HDG-VKLWDLRK----LKNFR 434 (504)
Q Consensus 372 l~~g-~~dg~I~iwd~~~--~~~--~~~~~----~~--~~~i~~l~~s~~g~~l~s~~-~d~-v~vwd~~~----~~~~~ 434 (504)
++++ ..++.|.+||+.. ++. ...+. ++ ...+..++|+|+|.+|+++. .++ |.+||+.. .+.+.
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 6555 4789999999953 332 22222 11 23577899999998887555 556 99999982 23344
Q ss_pred eeecCCCCCCeeEEEECCCCCEEEEEeC-c--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 435 SFESSDSETPTNSVDFDHSGSYLAVASA-D--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 435 ~~~~~~~~~~v~~i~~~~~g~~l~~~~~-d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.+... ..+..++|+|+|++|++++. + +.+|+++.....++.+..+.. .....+++|.++-.
T Consensus 272 ~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~---g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 272 FQPTE---TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV---GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEECS---SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC---SSSCCEEEEEEEC-
T ss_pred eecCC---CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc---CCCCeeEEEEcccC
Confidence 44432 34889999999999998874 3 999988655455667777755 24567888877643
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=1.3e-23 Score=226.09 Aligned_cols=268 Identities=12% Similarity=0.075 Sum_probs=204.9
Q ss_pred CCCeEEEEeccCCCEEEEEeC-CC-----cEEEEcCCCCceEEEcccCcc------------------------ceeEEE
Q 010669 223 KPGIVSLDIHYSKDVIATGGV-DT-----NAVLFDRPSGQIVTTLSGHSK------------------------KVTSVK 272 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~-dg-----~i~vwd~~~~~~~~~~~~h~~------------------------~v~~l~ 272 (504)
...+.+++|+|||++|++++. || .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 446899999999999999998 88 899999999987776655433 388999
Q ss_pred EeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCC
Q 010669 273 FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAG 352 (504)
Q Consensus 273 ~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 352 (504)
|+|||++|++++. +.|.+||+.++.. .....+..|...+.+++|+|+|++|++++ ++.|++||+.+++.........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 9999999999887 8999999987410 03345667788899999999999999987 4699999999987654432110
Q ss_pred CC---CC--------CCCeEEEEECCCCCEEEEEeCCC---------------------------------cEEEEEcCC
Q 010669 353 TD---GR--------PEGYTSAAFHPDGLILGTGTSEA---------------------------------LVKIWDVKS 388 (504)
Q Consensus 353 ~~---~~--------~~~v~~~~~~pdg~~l~~g~~dg---------------------------------~I~iwd~~~ 388 (504)
.. +. ...+..++|+|||+.|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 00 00 00147899999999999987765 789999988
Q ss_pred -Cceeeeee--CCCCCeEEEEEcCCCcEEEEEeC-----Cc-EEEEEcCCCcceeeeecCCCCC---CeeEEEECCCCCE
Q 010669 389 -QANVAKFD--GHVGAVTAISFSENGYYLATAAH-----DG-VKLWDLRKLKNFRSFESSDSET---PTNSVDFDHSGSY 456 (504)
Q Consensus 389 -~~~~~~~~--~~~~~i~~l~~s~~g~~l~s~~~-----d~-v~vwd~~~~~~~~~~~~~~~~~---~v~~i~~~~~g~~ 456 (504)
++...... .|...+..++| |||++|++++. +. |++||+.+++....+..+. .. .+..++|+|||++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETS-PTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEEC-SSCCCCCSCCEECTTSCE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCC-CCcCCcCCceEECCCCeE
Confidence 77554433 36778999999 99999987753 24 9999999988766655432 12 3568999999998
Q ss_pred EEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEE-EEeecCc
Q 010669 457 LAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFL-FLFVLGQ 501 (504)
Q Consensus 457 l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l-~~~~~g~ 501 (504)
+++++.+ ++||.++. .+. ...+..| ...|..+ .|+++|+
T Consensus 351 ~~~~~~~g~~~l~~~~~---~~~-~~~l~~~--~~~v~~~~~~s~dg~ 392 (741)
T 2ecf_A 351 LWSSERTGFQHLYRIDS---KGK-AAALTHG--NWSVDELLAVDEKAG 392 (741)
T ss_dssp EEEECTTSSCEEEEECS---SSC-EEESCCS--SSCEEEEEEEETTTT
T ss_pred EEEecCCCccEEEEEcC---CCC-eeeeeec--ceEEEeEeEEeCCCC
Confidence 8888777 88998853 233 6777776 6678777 5999986
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.6e-23 Score=214.60 Aligned_cols=263 Identities=13% Similarity=0.113 Sum_probs=205.4
Q ss_pred eccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeC--CCCCCcceeEEecc
Q 010669 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG--SEDGNYDCKHTLKD 308 (504)
Q Consensus 231 ~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~--~~~~~~~~~~~~~~ 308 (504)
|+|++.++++++.|++|.+||..+++++.++..+.. +.+++|+|+|++|++++.|++|.+||+ .+. .++..+.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---~~~~~i~- 219 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---TKVAEIK- 219 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC---EEEEEEE-
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC---cEEEEEe-
Confidence 889999999999999999999999999999884333 899999999999999999999999999 553 5666666
Q ss_pred CCcCeEEEEEcc----CCCEEEEEeC-CCeEEEEECCCCeEEEEeecCCCC-----CC-CCCeEEEEECCCCC-EEEEEe
Q 010669 309 HTAEVQAVTVHA----TNKYFVTASL-DNTWCFYDLSSGICLTQVSDAGTD-----GR-PEGYTSAAFHPDGL-ILGTGT 376 (504)
Q Consensus 309 h~~~v~~l~~~p----~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~-----~~-~~~v~~~~~~pdg~-~l~~g~ 376 (504)
+...+..++|+| +|+++++++. +++|.+||..+++.+..+...+.. .| ...+..+.++|++. ++++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 445689999999 9999999885 899999999999988877632100 01 23688999999765 556667
Q ss_pred CCCcEEEEEcCCCceee--eeeCCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcceeeeecCC--CCCCeeEEEE
Q 010669 377 SEALVKIWDVKSQANVA--KFDGHVGAVTAISFSENGYYLATAAH-DG-VKLWDLRKLKNFRSFESSD--SETPTNSVDF 450 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~--~~~~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~~~~~~~~~--~~~~v~~i~~ 450 (504)
.+|.|.+||+.+.+.+. .+. +...+.++.|+|+|++|++++. ++ |.+||+.+++++..+.... |......+ +
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~ 377 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-V 377 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-E
T ss_pred CCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-C
Confidence 88999999998866543 343 5567889999999998776654 44 9999999999888877521 22223333 4
Q ss_pred CCC-CCEEEEEe-C-c-EEEEEeeccC---ccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 451 DHS-GSYLAVAS-A-D-IRVYQVASVK---ADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 451 ~~~-g~~l~~~~-~-d-i~vw~~~~~~---~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|+ |.+++++. . + |.||++...+ ..|++++++.+| .+.+..+.++|+|+.
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~--g~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ--GGGSLFIKTHPKSSH 434 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCCE
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcC--CCCceEEEcCCCCCc
Confidence 777 66666664 3 3 9999995421 129999999998 677889999999975
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=6e-23 Score=211.91 Aligned_cols=258 Identities=14% Similarity=0.126 Sum_probs=201.8
Q ss_pred eEEEEeccCCCEEEEEeCCCcEEEEcC--CCCceEEEcccCccceeEEEEee----CCCEEEEEeC-CCcEEEEeCCCCC
Q 010669 226 IVSLDIHYSKDVIATGGVDTNAVLFDR--PSGQIVTTLSGHSKKVTSVKFVT----EGDLFLTGSA-DKTVRVWQGSEDG 298 (504)
Q Consensus 226 I~~~~~s~~~~~l~sg~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~l~~s~----~~~~l~s~s~-dg~i~iwd~~~~~ 298 (504)
+.+++|+|+|++|++++.|+.|.+||+ .+++.+.++.. ...+..++|+| +|+++++++. +++|.+||..+.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~- 258 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL- 258 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-
Confidence 889999999999999999999999999 88888888874 45689999999 9999998884 899999998775
Q ss_pred CcceeEEecc----------CC-cCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeEEE--EeecCCCCCCCCCeEEEE
Q 010669 299 NYDCKHTLKD----------HT-AEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLT--QVSDAGTDGRPEGYTSAA 364 (504)
Q Consensus 299 ~~~~~~~~~~----------h~-~~v~~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~v~~~~ 364 (504)
+++..+.. |. ..+.++.++|++. ++++...++.|.+||+.+.+.+. .+. +...+..+.
T Consensus 259 --~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~------~~~~~~~~~ 330 (543)
T 1nir_A 259 --EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG------AAPFLHDGG 330 (543)
T ss_dssp --CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE------CCSSCCCEE
T ss_pred --ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec------cCcCccCce
Confidence 55555543 22 3789999999776 45666778999999998865443 222 234577899
Q ss_pred ECCCCCEEEEE-eCCCcEEEEEcCCCceeeeeeC----CCCCeEEEEEcCC-CcEEEEEe-CCc-EEEEEcCC-------
Q 010669 365 FHPDGLILGTG-TSEALVKIWDVKSQANVAKFDG----HVGAVTAISFSEN-GYYLATAA-HDG-VKLWDLRK------- 429 (504)
Q Consensus 365 ~~pdg~~l~~g-~~dg~I~iwd~~~~~~~~~~~~----~~~~i~~l~~s~~-g~~l~s~~-~d~-v~vwd~~~------- 429 (504)
|+|+|++|+++ ..++.|.+||+.+++.+..+.. |.+....+ ++|+ |.+++++. .++ |.+||+.+
T Consensus 331 ~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~ 409 (543)
T 1nir_A 331 WDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA 409 (543)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred ECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhc
Confidence 99999977655 4589999999999998888764 55444443 4676 66677765 445 99999988
Q ss_pred CcceeeeecCCCCCCeeEEEECCCCCEEEEEe--------Cc-EEEEEeeccCccceeE-EEc--------cCCCCCCce
Q 010669 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVAS--------AD-IRVYQVASVKADWNCI-KTF--------PDLSGTGAA 491 (504)
Q Consensus 430 ~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~--------~d-i~vw~~~~~~~~~~~i-~~~--------~~h~~~~~v 491 (504)
++.++++..+ ...+..+.|+|+|++|++++ .+ |.|||+.+ .+.. ..+ ..+ ...+
T Consensus 410 ~~~v~~l~~~--g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~----~~~~~~~~~v~~~~~~~~~--~~~~ 481 (543)
T 1nir_A 410 WKKVAELQGQ--GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN----LDAKYQVLPIAEWADLGEG--AKRV 481 (543)
T ss_dssp TSEEEEEECS--CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC----TTSCCEEECHHHHHCCCSS--CCEE
T ss_pred CeEEEEEEcC--CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC----CCCCeEEeechhhcccCCC--CCce
Confidence 7888888876 45678899999999999987 23 99999944 3333 332 344 6789
Q ss_pred eEEEEeecCcc
Q 010669 492 SFLFLFVLGQT 502 (504)
Q Consensus 492 ~~l~~~~~g~~ 502 (504)
..+.|+++|+.
T Consensus 482 ~~~~~~~~g~~ 492 (543)
T 1nir_A 482 VQPEYNKRGDE 492 (543)
T ss_dssp EEEEECSSSSE
T ss_pred EeccCCCCCCE
Confidence 99999999974
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.8e-23 Score=197.99 Aligned_cols=233 Identities=12% Similarity=0.109 Sum_probs=180.1
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC-CceEEEcccC-ccceeEEEEeeCCCEEEEEe--CCCcEEEEeCCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS-GQIVTTLSGH-SKKVTSVKFVTEGDLFLTGS--ADKTVRVWQGSE 296 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h-~~~v~~l~~s~~~~~l~s~s--~dg~i~iwd~~~ 296 (504)
.|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|++++|++++ .++...||.+..
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 4677899999999999999987 78999999998 8877776666 36789999999999999998 445666665543
Q ss_pred CCCcceeEEeccCCcCeEEEEEccCCCEEE-EEeCCCeEEEEECC--CCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE
Q 010669 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLS--SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~-s~s~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~ 373 (504)
.. .....+..+ ..+..++|+|++++|+ +++.++.+.+|+++ ++.. ..+. .+...+.+++|+|+|++|+
T Consensus 118 ~~--~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~-----~~~~~~~~~~~s~dg~~l~ 188 (297)
T 2ojh_A 118 TG--GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLT-----HGEGRNDGPDYSPDGRWIY 188 (297)
T ss_dssp TC--CCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECC-----CSSSCEEEEEECTTSSEEE
T ss_pred CC--CceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcc-----cCCCccccceECCCCCEEE
Confidence 21 223344433 3489999999999877 77889999999863 4433 2332 4456799999999999887
Q ss_pred EEe-CCCcEEEEEcC-CCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----------c-EEEEEcCCCcceeeeecC
Q 010669 374 TGT-SEALVKIWDVK-SQANVAKFDGHVGAVTAISFSENGYYLATAAHD-----------G-VKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 374 ~g~-~dg~I~iwd~~-~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----------~-v~vwd~~~~~~~~~~~~~ 439 (504)
+++ .++.+++|++. .+..+..+..|...+.+++|+|+|.+|++++.+ . |++||+.+++........
T Consensus 189 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 189 FNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp EEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE
T ss_pred EEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC
Confidence 766 58999999986 556677777788889999999999999888764 4 999999987664444322
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCc
Q 010669 440 DSETPTNSVDFDHSGSYLAVASAD 463 (504)
Q Consensus 440 ~~~~~v~~i~~~~~g~~l~~~~~d 463 (504)
.+...+..++|+|+|++|++++.+
T Consensus 269 ~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 269 GGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp ESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred CCCcccccceECCCCCEEEEEEec
Confidence 235678899999999999988765
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=4.2e-23 Score=207.31 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=176.1
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCC----------ceEEEc-----ccCccceeEEEEeeCCCEEE----EE
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSG----------QIVTTL-----SGHSKKVTSVKFVTEGDLFL----TG 283 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~----------~~~~~~-----~~h~~~v~~l~~s~~~~~l~----s~ 283 (504)
...+..+++++++.++++++.+| +++|+.... ..+... ..+...|.+++|+|++++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578999999999999999888 888764210 111111 13566799999999999999 78
Q ss_pred eCCCcEEEEeCCCC--------CCcceeEEeccCCcCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeEEEEeecCCCC
Q 010669 284 SADKTVRVWQGSED--------GNYDCKHTLKDHTAEVQAVTVHAT-NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354 (504)
Q Consensus 284 s~dg~i~iwd~~~~--------~~~~~~~~~~~h~~~v~~l~~~p~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 354 (504)
+.|++|+|||+.+. ........+.+|...|.+++|+|+ +++|++++.||+|++||++++.......
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~----- 189 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL----- 189 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-----
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-----
Confidence 89999999998653 111234566789999999999998 7899999999999999999986654443
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCC-------CCCeEEEEEcCCCcEEEEEe-CC------
Q 010669 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH-------VGAVTAISFSENGYYLATAA-HD------ 420 (504)
Q Consensus 355 ~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~-------~~~i~~l~~s~~g~~l~s~~-~d------ 420 (504)
+|...+.+++|+|+|++|++|+.||.|++||++ ++....+..| ...|.++.|++++.++++.+ .+
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 466789999999999999999999999999998 5555555433 23799999999988886543 21
Q ss_pred c-EEEEEcCCCcc--e---eeeecC-----CCCCCeeEEEECCCCCEEEEEeCc---EEEEEeec
Q 010669 421 G-VKLWDLRKLKN--F---RSFESS-----DSETPTNSVDFDHSGSYLAVASAD---IRVYQVAS 471 (504)
Q Consensus 421 ~-v~vwd~~~~~~--~---~~~~~~-----~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~ 471 (504)
. +++||+++.+. . ..+... ....+...+.+-++.+++++++.. +.|.....
T Consensus 269 ~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 269 PDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp CEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred CceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 2 89999986531 1 111111 111222233444777888877664 77777543
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=5.7e-22 Score=191.66 Aligned_cols=256 Identities=13% Similarity=0.132 Sum_probs=186.3
Q ss_pred EeccCCC-EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeC-CCcEEEEeCCCCCCcce-eEEe
Q 010669 230 DIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA-DKTVRVWQGSEDGNYDC-KHTL 306 (504)
Q Consensus 230 ~~s~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~-dg~i~iwd~~~~~~~~~-~~~~ 306 (504)
.|.++++ .+++++.++.|.+||..+++....+..+...+ +++|+|+++++++++. ++.|.+||..++ .. ...+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~---~~~~~~~ 79 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE---PPKVVAI 79 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS---SCEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC---ceeEEec
Confidence 3555555 47778889999999999999988887666667 9999999997666655 899999999875 33 5555
Q ss_pred ccCCcCeEEEEEccCCCEEEEEeCCC---eEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE-EEeCCCc-E
Q 010669 307 KDHTAEVQAVTVHATNKYFVTASLDN---TWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG-TGTSEAL-V 381 (504)
Q Consensus 307 ~~h~~~v~~l~~~p~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~-~g~~dg~-I 381 (504)
..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. .....+++|+|||++++ ++..++. |
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceE
Confidence 56666665699999999999555553 899999999988777652 23468999999998554 4556688 9
Q ss_pred EEEEcCCCceee----eeeCCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcc---eeeeecCCCCCCeeEEEECC
Q 010669 382 KIWDVKSQANVA----KFDGHVGAVTAISFSENGYYLATAAH-DG-VKLWDLRKLKN---FRSFESSDSETPTNSVDFDH 452 (504)
Q Consensus 382 ~iwd~~~~~~~~----~~~~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~---~~~~~~~~~~~~v~~i~~~~ 452 (504)
.+|++.....+. ........+..++|+|+|+++++++. ++ |.+||+.+++. +..+.. ...+..++|+|
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~~~~sp 230 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT---NNLPGTIVVSR 230 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC---SSCCCCEEECT
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC---CCCCceEEECC
Confidence 999987543321 12233456899999999997766654 55 99999998887 666654 35678899999
Q ss_pred CCCEEEEEeCc---EEEEEeeccCcccee--EEEccCC--CCCC---ceeEEEEeecCcc
Q 010669 453 SGSYLAVASAD---IRVYQVASVKADWNC--IKTFPDL--SGTG---AASFLFLFVLGQT 502 (504)
Q Consensus 453 ~g~~l~~~~~d---i~vw~~~~~~~~~~~--i~~~~~h--~~~~---~v~~l~~~~~g~~ 502 (504)
+|++|++++.. +.+|+. .+++. +..+..+ .... ....++|+|+|+.
T Consensus 231 dg~~l~v~~~~~~~i~~~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 286 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQ----LSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETK 286 (331)
T ss_dssp TSSEEEEECSSEEEEEEEET----TTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSE
T ss_pred CCCEEEEEEcCCCEEEEEEC----CCCceeeecccccccccCCCCcccccceEECCCCCE
Confidence 99988877643 888987 33333 4444322 0112 2245899999874
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1e-22 Score=192.71 Aligned_cols=245 Identities=10% Similarity=0.138 Sum_probs=182.1
Q ss_pred EEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC-CCCcceeEEeccC-CcCeEEEE
Q 010669 240 TGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE-DGNYDCKHTLKDH-TAEVQAVT 317 (504)
Q Consensus 240 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~h-~~~v~~l~ 317 (504)
.++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|.+||+.+ + ........| ...+.+++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP---SPEKVDTGFATICNNDHG 91 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC---SCEECCCTTCCCBCSCCE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC---CceEeccccccccccceE
Confidence 3467899999999988765 4455888999999999999999887 78999999987 5 334444444 46789999
Q ss_pred EccCCCEEEEEeC--CCe--EEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEEcCC-Cce
Q 010669 318 VHATNKYFVTASL--DNT--WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG-TGTSEALVKIWDVKS-QAN 391 (504)
Q Consensus 318 ~~p~~~~l~s~s~--dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~-~g~~dg~I~iwd~~~-~~~ 391 (504)
|+|++++|++++. ++. |..|++.++.. ..+. ....+.+++|+|+|+.|+ ++..++.++||++.. +..
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~------~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT------KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC------SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee------cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 9999999999983 344 45555555542 2332 123488999999999877 778899999999642 334
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcC-CCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-----
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAAH-DG-VKLWDLR-KLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD----- 463 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d----- 463 (504)
...+..+...+.+++|+|+|.+|+.++. ++ +.+|++. .+.....+..+ ...+..+.|+|+|++|++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS--AYGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC--SEEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC--CcccCCeEECCCCCEEEEEEcCCCCCc
Confidence 4566667789999999999998887764 56 8888876 44455555443 4578899999999999887652
Q ss_pred --------EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 464 --------IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 464 --------i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+.+|++.. .....+..+.+| ...+.++.|+|+|+.
T Consensus 243 ~~~~~~~~l~~~d~~~--~~~~~~~~~~~~--~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDG--GNVETLFDLFGG--QGTMNSPNWSPDGDE 285 (297)
T ss_dssp CCSSEEEEEEEEETTS--CSCEEEEEEEES--TTTSCSCCBCTTSSE
T ss_pred ccccCceEEEEEecCC--CCceeeeccCCC--CcccccceECCCCCE
Confidence 77888732 233445666676 678999999999974
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=8.2e-22 Score=190.55 Aligned_cols=240 Identities=9% Similarity=0.074 Sum_probs=176.0
Q ss_pred CCCeEEEEeccCCCEEEEEeC-CCcEEEEcCCCCce-EEEcccCccceeEEEEeeCCCEEEEEeCCC---cEEEEeCCCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGV-DTNAVLFDRPSGQI-VTTLSGHSKKVTSVKFVTEGDLFLTGSADK---TVRVWQGSED 297 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~-dg~i~vwd~~~~~~-~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg---~i~iwd~~~~ 297 (504)
...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+||+.++
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 4455 9999999996666555 88999999999987 777777777666699999999988655553 8999999875
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEE-eCCCe-EEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE-
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTA-SLDNT-WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT- 374 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~-s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~- 374 (504)
.....+.. .....+++|+|+|++++++ ..++. |.+|++.....+...... ..........++|+|+|+++++
T Consensus 119 ---~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 119 ---KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE-FISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ---EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE-EECSSSSEEEEEECTTSSEEEEE
T ss_pred ---CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc-cccCCCCccceEECCCCCEEEEE
Confidence 45555543 3457999999999865555 55578 999999864433211100 0022345789999999996554
Q ss_pred EeCCCcEEEEEcCCCce---eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcc--eeeeecC--CCC---
Q 010669 375 GTSEALVKIWDVKSQAN---VAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKN--FRSFESS--DSE--- 442 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~---~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~--~~~~~~~--~~~--- 442 (504)
+..++.|++||+.+++. +..+.. ...+..++|+|+|++|++++.+ + |.+||+.+++. +..+... ...
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPL 272 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGG
T ss_pred eCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCc
Confidence 45689999999999887 777764 3677899999999988777654 4 99999998776 3333221 001
Q ss_pred CCeeEEEECCCCCEEEEEeCc---EEEEEe
Q 010669 443 TPTNSVDFDHSGSYLAVASAD---IRVYQV 469 (504)
Q Consensus 443 ~~v~~i~~~~~g~~l~~~~~d---i~vw~~ 469 (504)
.....++|+|+|++|++++.+ +.+|++
T Consensus 273 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 273 FGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp TTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 123568999999999877665 999998
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=8.4e-22 Score=190.97 Aligned_cols=255 Identities=13% Similarity=0.160 Sum_probs=180.9
Q ss_pred EEEEEeCCCcEEEEcCC-CC--ceEEEcccCccceeEEEEeeCCCEEEEEeCC-CcEEEEeCCC-CCCcceeEEeccCCc
Q 010669 237 VIATGGVDTNAVLFDRP-SG--QIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD-KTVRVWQGSE-DGNYDCKHTLKDHTA 311 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~-~~--~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d-g~i~iwd~~~-~~~~~~~~~~~~h~~ 311 (504)
++++++.++.|++|++. ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|.+|++.. .+....+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 44455789999999985 33 233333 467789999999999988888876 9999999972 12333444554443
Q ss_pred CeEEEEEccCCCEEEEEeC-CCeEEEEECCCC---eEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEc
Q 010669 312 EVQAVTVHATNKYFVTASL-DNTWCFYDLSSG---ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDV 386 (504)
Q Consensus 312 ~v~~l~~~p~~~~l~s~s~-dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~ 386 (504)
.+..++|+|+++++++++. ++.|.+||+..+ .....+. ....+.+++|+|+|+++++++ .++.|++||+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE------GLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC------CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc------CCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 7899999999998877665 889999999533 3333332 123588999999999888777 8999999999
Q ss_pred CC-Cceee----eeeC-CCCCeEEEEEcCCCcEEEEEe-CCc-EEEEEcCC--Ccc--eeeeecC----CCCCCeeEEEE
Q 010669 387 KS-QANVA----KFDG-HVGAVTAISFSENGYYLATAA-HDG-VKLWDLRK--LKN--FRSFESS----DSETPTNSVDF 450 (504)
Q Consensus 387 ~~-~~~~~----~~~~-~~~~i~~l~~s~~g~~l~s~~-~d~-v~vwd~~~--~~~--~~~~~~~----~~~~~v~~i~~ 450 (504)
.+ ++... .+.. ....+.+++|+|+|.+|++++ .++ |.+||+.. +.. ...+... .....+..++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 87 54432 2232 334788999999999776665 556 99999953 332 2222211 11235678999
Q ss_pred CCCCCEEEEEe-Cc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 451 DHSGSYLAVAS-AD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 451 ~~~g~~l~~~~-~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|+|++|++++ .+ +.+|++.......+.+..+..+ . .+.+++|+++|+.
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~--~-~~~~~~~s~dg~~ 290 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE--T-QPRGFNVDHSGKY 290 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS--S-SCCCEEECTTSSE
T ss_pred CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC--C-ccceEEECCCCCE
Confidence 99999888665 34 9999995433456777777664 3 3889999999873
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=3.9e-21 Score=187.29 Aligned_cols=244 Identities=13% Similarity=0.143 Sum_probs=172.5
Q ss_pred CCCeEEEEeccCCCEEEEEeC---CCcEEEEcCCCCc--eEEEcccCccceeEEEEeeCCCEEEEEe-CCCcEEEEeCCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGV---DTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTGS-ADKTVRVWQGSE 296 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~---dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~s~~~~~l~s~s-~dg~i~iwd~~~ 296 (504)
......++|+|+|+ |++++. ++.|.+|++.+++ .+..+..+...+..++|+|+|++|++++ .++.|.+|++..
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 34567899999999 554443 6899999997665 4445555777899999999999888887 789999999965
Q ss_pred CCCcceeEEecc---------CCcCeEEEEEccCCCEEEEEeCCCeEEEEECC-CCeEEEEeecCCCCCCCCCeEEEEEC
Q 010669 297 DGNYDCKHTLKD---------HTAEVQAVTVHATNKYFVTASLDNTWCFYDLS-SGICLTQVSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 297 ~~~~~~~~~~~~---------h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~ 366 (504)
.+....+..+.. +...+.+++|+|+|+++++...++.|.+||+. ++......... . ........++|+
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~-~~g~~p~~~~~s 195 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT-M-EAGFGPRHLVFS 195 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE-C-CTTCCEEEEEEC
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE-c-CCCCCCceEEEC
Confidence 444344443322 12348899999999966666678899999998 55433221110 1 112357889999
Q ss_pred CCCCEEEE-EeCCCcEEEEEcCC--Cce--eeeeeCCC------CCeEEEEEcCCCcEEEEE-eCCc-EEEEEcCCC---
Q 010669 367 PDGLILGT-GTSEALVKIWDVKS--QAN--VAKFDGHV------GAVTAISFSENGYYLATA-AHDG-VKLWDLRKL--- 430 (504)
Q Consensus 367 pdg~~l~~-g~~dg~I~iwd~~~--~~~--~~~~~~~~------~~i~~l~~s~~g~~l~s~-~~d~-v~vwd~~~~--- 430 (504)
|||+++++ +..++.|.+|++.. ++. +..+.... ..+..++|+|+|++|+++ ..++ |.+||+...
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence 99996555 56788999999874 432 22333222 358899999999988554 4455 999999732
Q ss_pred cceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEeec
Q 010669 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQVAS 471 (504)
Q Consensus 431 ~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~ 471 (504)
+.+..+..+ ...+..++|+|+|++|++++.+ +.+|+++.
T Consensus 276 ~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 276 TLIQQISTE--GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEEECS--SSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEeEEEecC--CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 333344332 3467899999999999888754 99998754
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=7.2e-23 Score=219.70 Aligned_cols=271 Identities=9% Similarity=0.027 Sum_probs=193.0
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCcc---ceeEEEEeeCCCEEEEEeCC---------CcEEEE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK---KVTSVKFVTEGDLFLTGSAD---------KTVRVW 292 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~s~s~d---------g~i~iw 292 (504)
.+.+++|+|||+++++ +.||.|++||+.+++....+.+|.. .|.+++|+|||++|++++.+ +.|.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999997776 7899999999999988888877765 49999999999999998764 788899
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCC--------------CC
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR--------------PE 358 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--------------~~ 358 (504)
|+.++.. ..+.....|...+..++|+|+|+.|+.++. +.|++||+.+++.......... .. ..
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~-~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE-GVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT-TTEEEEECCHHHHHTTSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC-CceECcccceeEEEEecc
Confidence 9987531 222222345556889999999999999886 7999999998876654431100 00 01
Q ss_pred CeEEEEECCCCCEEEEEeCCC----------------------------------cEEEEEcCCCceeeeeeCC------
Q 010669 359 GYTSAAFHPDGLILGTGTSEA----------------------------------LVKIWDVKSQANVAKFDGH------ 398 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~dg----------------------------------~I~iwd~~~~~~~~~~~~~------ 398 (504)
.+.+++|+|||+.|++++.++ .|++||+.+++....+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 237899999999999887543 7999999888765556543
Q ss_pred CCCeEEEEEcCCCcEEEEEeCC----c-EEEEEcCCCcceeeeecCCCCCCe----eEEEECCCCCEEEEE-e-Cc----
Q 010669 399 VGAVTAISFSENGYYLATAAHD----G-VKLWDLRKLKNFRSFESSDSETPT----NSVDFDHSGSYLAVA-S-AD---- 463 (504)
Q Consensus 399 ~~~i~~l~~s~~g~~l~s~~~d----~-v~vwd~~~~~~~~~~~~~~~~~~v----~~i~~~~~g~~l~~~-~-~d---- 463 (504)
...+..++|+|||++|++.... . |++||+.+++....+.... ...+ ..++|+|||+.|+.. + .+
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES-EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC-SSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc-CCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 5678999999999988776432 3 9999999888665554321 2223 378999999977754 3 22
Q ss_pred --EEEEEee-ccCccceeEEEccCCCCCCceeE-EEEeecCcc
Q 010669 464 --IRVYQVA-SVKADWNCIKTFPDLSGTGAASF-LFLFVLGQT 502 (504)
Q Consensus 464 --i~vw~~~-~~~~~~~~i~~~~~h~~~~~v~~-l~~~~~g~~ 502 (504)
.+||.++ .......+...+..+ ...+.. +.|+|+|+.
T Consensus 333 ~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg~~ 373 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKGNK 373 (723)
T ss_dssp CEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTTTE
T ss_pred ceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCCCE
Confidence 3566653 111110013444432 334544 689999874
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=7.6e-22 Score=191.91 Aligned_cols=253 Identities=10% Similarity=0.030 Sum_probs=185.9
Q ss_pred EEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCc-cceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCCCcceeEE
Q 010669 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS-KKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDGNYDCKHT 305 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~ 305 (504)
.+++++++.++++++.++.|.+||..+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.++ .....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~---~~~~~ 80 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC---KNTFH 80 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC---cEEEE
Confidence 35678888899999999999999999999888876543 2578999999998654 5567899999999875 44444
Q ss_pred ecc-C-----CcCeEEEEEccCCCEEEEEeCC------------CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC
Q 010669 306 LKD-H-----TAEVQAVTVHATNKYFVTASLD------------NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367 (504)
Q Consensus 306 ~~~-h-----~~~v~~l~~~p~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 367 (504)
+.. + ...+.+++|+|+|+++++++.+ +.|.+||+.+++....+... .+...+.+++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF---PMPRQVYLMRAAD 157 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE---ECCSSCCCEEECT
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec---cCCCcccceeECC
Confidence 432 2 2337889999999999998865 89999999885432211100 1223588999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC------------------------------------------------
Q 010669 368 DGLILGTGTSEALVKIWDVKSQANVAKFDGHV------------------------------------------------ 399 (504)
Q Consensus 368 dg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~------------------------------------------------ 399 (504)
||+ +++++ +.|.+||+.+++.+..+..+.
T Consensus 158 dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 55554 349999999887766554221
Q ss_pred --------------------CCeEEEEEcC-CCcEEEEEeCCcEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEE
Q 010669 400 --------------------GAVTAISFSE-NGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458 (504)
Q Consensus 400 --------------------~~i~~l~~s~-~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~ 458 (504)
..+..++|+| +|.+++++ .+.|.+||+.+++.+..+... ..+.+++|+|+|++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLD---HTYYCVAFDKKGDKLY 310 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECS---SCCCEEEECSSSSCEE
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCC---CCccceEECCCCCEEE
Confidence 1345678889 99999988 334999999998887777643 4578999999999888
Q ss_pred EEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEe
Q 010669 459 VASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLF 497 (504)
Q Consensus 459 ~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~ 497 (504)
+++.+ +.+||. .+++.+..++...+...+..+.++
T Consensus 311 ~~~~~~~v~v~d~----~~~~~~~~~~~~~~~~~~~~~~~~ 347 (349)
T 1jmx_B 311 LGGTFNDLAVFNP----DTLEKVKNIKLPGGDMSTTTPQVF 347 (349)
T ss_dssp EESBSSEEEEEET----TTTEEEEEEECSSSCCBTCCCEEE
T ss_pred EecCCCeEEEEec----cccceeeeeecCCCCCCCcceeEE
Confidence 87665 999998 667778777654223344444443
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=5e-22 Score=213.74 Aligned_cols=260 Identities=10% Similarity=0.032 Sum_probs=195.3
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc--eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
.|.+++|||||++|++++. +.|++||+.++. ....+..|...+.+++|+|||++|+.++. +.|.+||+.++ ..
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g---~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG---RQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT---EE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC---CE
Confidence 4788999999999999886 899999998873 44567778888999999999999998874 68999999874 33
Q ss_pred eEEeccCCcC----------------eEEEEEccCCCEEEEEeCCC---------------------------------e
Q 010669 303 KHTLKDHTAE----------------VQAVTVHATNKYFVTASLDN---------------------------------T 333 (504)
Q Consensus 303 ~~~~~~h~~~----------------v~~l~~~p~~~~l~s~s~dg---------------------------------~ 333 (504)
......+... +.++.|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 3333333322 47899999999999998766 7
Q ss_pred EEEEECCC-CeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEEcCCCceeeeeeCCCC----CeE
Q 010669 334 WCFYDLSS-GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS-----EALVKIWDVKSQANVAKFDGHVG----AVT 403 (504)
Q Consensus 334 i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~-----dg~I~iwd~~~~~~~~~~~~~~~----~i~ 403 (504)
|.+||+.+ ++....... ..+...+..++| |||+.|++++. ++.|++||+.+++....+..+.. .+.
T Consensus 265 l~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLG---KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEECSSTTCCCEEECCC---SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred EEEEECCCCCceEEecCC---CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 89999988 775443321 135677999999 99999987654 56899999999987776665543 456
Q ss_pred EEEEcCCCcEEEEEeCCc-EEEEEcC-CCcceeeeecCCCCCCeeEE-EECCCCCEEEEEeC-c----EEEEEeeccCcc
Q 010669 404 AISFSENGYYLATAAHDG-VKLWDLR-KLKNFRSFESSDSETPTNSV-DFDHSGSYLAVASA-D----IRVYQVASVKAD 475 (504)
Q Consensus 404 ~l~~s~~g~~l~s~~~d~-v~vwd~~-~~~~~~~~~~~~~~~~v~~i-~~~~~g~~l~~~~~-d----i~vw~~~~~~~~ 475 (504)
.++|+|||+++++++.++ +.||.+. .+. ...+..+ ...+..+ .|+|+|+.|++.+. + ++||++...
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~--~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~--- 414 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHG--NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ--- 414 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCS--SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT---
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeec--ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC---
Confidence 899999999888888887 7777665 334 4545443 4567777 59999998765543 2 889998532
Q ss_pred ceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 476 WNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 476 ~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+..+..+.. ...+..+.|+|+|+.
T Consensus 415 g~~~~~l~~---~~~~~~~~~spdg~~ 438 (741)
T 2ecf_A 415 GGQPQRLSK---APGMHSASFARNASV 438 (741)
T ss_dssp CCCCEECCC---SCSEEEEEECTTSSE
T ss_pred CCCeeeccc---CCCceEEEECCCCCE
Confidence 344555554 456789999999974
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=1.7e-21 Score=208.45 Aligned_cols=261 Identities=15% Similarity=0.125 Sum_probs=191.4
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC-----CC
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE-----DG 298 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~-----~~ 298 (504)
..|.+++|+|| +.++.+. ++.|++||+.+++... +..+...+.+++|+|||++|+++ .|+.|.+||+.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g- 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS- 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC-
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC-
Confidence 56999999999 6665554 5999999998876644 44467779999999999998885 679999999987 4
Q ss_pred CcceeEEeccCCcC--------------eEEEEEccCCCEEEEEe---------------------------------CC
Q 010669 299 NYDCKHTLKDHTAE--------------VQAVTVHATNKYFVTAS---------------------------------LD 331 (504)
Q Consensus 299 ~~~~~~~~~~h~~~--------------v~~l~~~p~~~~l~s~s---------------------------------~d 331 (504)
........+... +.++.|+|||++|++++ .+
T Consensus 157 --~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 157 --RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp --CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred --CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 233322333232 48899999999999987 44
Q ss_pred CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEcCCCceeeeee--CCCC---C
Q 010669 332 NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA-----LVKIWDVKSQANVAKFD--GHVG---A 401 (504)
Q Consensus 332 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg-----~I~iwd~~~~~~~~~~~--~~~~---~ 401 (504)
..|.+||+.+++...... ...+...+.+++|+|||+.|++++.++ .|++||+.+++....+. .+.. .
T Consensus 235 ~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEETTTTEEEECCC---CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCceEeecc---CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 679999999987654432 124556799999999999999887775 89999999884333332 1222 3
Q ss_pred eEEEEEcC--CCcEEEEEeCCc-EEEEEcC-CCcceeeeecCCCCCCeeE-EEECCCCCEEEEEeCc-----EEEEEeec
Q 010669 402 VTAISFSE--NGYYLATAAHDG-VKLWDLR-KLKNFRSFESSDSETPTNS-VDFDHSGSYLAVASAD-----IRVYQVAS 471 (504)
Q Consensus 402 i~~l~~s~--~g~~l~s~~~d~-v~vwd~~-~~~~~~~~~~~~~~~~v~~-i~~~~~g~~l~~~~~d-----i~vw~~~~ 471 (504)
+.++.|+| ||.++++++.++ +++|++. ++..+..+..+ ...+.. ++|+|+|+.|++++.+ ..||.++.
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~--~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG--EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS--SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC--CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 46789999 999999988887 8888775 55555555443 455766 7999999988776554 47887754
Q ss_pred cCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 472 VKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 472 ~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.. +. +..+. | ...+.+++|+|+|+.
T Consensus 390 ~~--~~-~~~l~-~--~~~~~~~~~spdg~~ 414 (706)
T 2z3z_A 390 KG--GK-TKDLT-P--ESGMHRTQLSPDGSA 414 (706)
T ss_dssp TC--CC-CEESC-C--SSSEEEEEECTTSSE
T ss_pred CC--CC-ceecc-C--CCceEEEEECCCCCE
Confidence 32 22 34443 4 556889999999964
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=3.9e-20 Score=181.31 Aligned_cols=264 Identities=13% Similarity=0.130 Sum_probs=180.4
Q ss_pred CCCCeEEEEeccCCCEEEEEeCC----CcEEEEcCCC--Cce--EEEcccCccceeEEEEeeCCCEEEEEe-CCCcEEEE
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVD----TNAVLFDRPS--GQI--VTTLSGHSKKVTSVKFVTEGDLFLTGS-ADKTVRVW 292 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~d----g~i~vwd~~~--~~~--~~~~~~h~~~v~~l~~s~~~~~l~s~s-~dg~i~iw 292 (504)
+......++|+|+|++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 45567789999999999998875 7999998765 432 3344445556777777 788777666 68899999
Q ss_pred eCCCCCCcceeEEe---cc--------CCcCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeE------E------EEe
Q 010669 293 QGSEDGNYDCKHTL---KD--------HTAEVQAVTVHATNKYFVTAS-LDNTWCFYDLSSGIC------L------TQV 348 (504)
Q Consensus 293 d~~~~~~~~~~~~~---~~--------h~~~v~~l~~~p~~~~l~s~s-~dg~i~iwd~~~~~~------~------~~~ 348 (504)
++...+........ .+ +...+.+++|+|+|+++++++ .++.|.+|++..... + ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99764432221111 11 123468899999999776665 488999999875431 1 111
Q ss_pred ecCCCCCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCce--eeeee---CCCCCeEEEEEcCCCcEEEEEeCC--
Q 010669 349 SDAGTDGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKSQAN--VAKFD---GHVGAVTAISFSENGYYLATAAHD-- 420 (504)
Q Consensus 349 ~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~~~~~~--~~~~~---~~~~~i~~l~~s~~g~~l~s~~~d-- 420 (504)
.. ........++|+|||+++++++ .++.|.+||+.+++. +..+. .+...+..++|+|||++|+++..+
T Consensus 206 ~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 206 KV----APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp EC----CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred ec----CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 11 2234578999999999887776 689999999987643 22232 233457899999999998777655
Q ss_pred c-EEEEEcC--CCc--ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEeeccCccceeEEEccCCCCCCcee
Q 010669 421 G-VKLWDLR--KLK--NFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQVASVKADWNCIKTFPDLSGTGAAS 492 (504)
Q Consensus 421 ~-v~vwd~~--~~~--~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~~~~~~~~i~~~~~h~~~~~v~ 492 (504)
+ |.+|++. +++ .+..+.. ...+..++|+|+|++|++++.+ +.+|.++. .+++........ ....++
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~--~~g~~~~~~~~~-~~~~p~ 355 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ--ATGLLTDIKKDI-KVDKPV 355 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT--TTCCEEECSCCE-ECSSEE
T ss_pred CEEEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC--CCCcEeecceee-eCCCCe
Confidence 5 9999996 344 2333332 3567899999999999988743 99988854 234433332111 245788
Q ss_pred EEEEe
Q 010669 493 FLFLF 497 (504)
Q Consensus 493 ~l~~~ 497 (504)
|+.|.
T Consensus 356 ~v~~~ 360 (361)
T 3scy_A 356 CLKFV 360 (361)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88876
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.5e-20 Score=183.19 Aligned_cols=230 Identities=15% Similarity=0.174 Sum_probs=183.5
Q ss_pred CeEEEEeccCCCEE-EEEeCCCcEEEEcCCCCceEEEcccCccc---------eeEEEEeeCCCEEEEEe--CCCcEEEE
Q 010669 225 GIVSLDIHYSKDVI-ATGGVDTNAVLFDRPSGQIVTTLSGHSKK---------VTSVKFVTEGDLFLTGS--ADKTVRVW 292 (504)
Q Consensus 225 ~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~---------v~~l~~s~~~~~l~s~s--~dg~i~iw 292 (504)
.+..++|+|+|+++ +++..++.|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+|
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV 169 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence 46788999999955 45556799999999999988887754432 78899999999877765 47889999
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
|..+. .....+..+...+.++.|+|+++++++++.++.|.+||+.+++....+... ..++...+..++|+|+|+.+
T Consensus 170 d~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 170 DGGNI---KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL-DDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp ETTTT---EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC-CSSSCCCEEEEEEETTTTEE
T ss_pred cCCCC---ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC-CCCCCcccceEEECCCCCEE
Confidence 99875 556666545666889999999999999999999999999999888776532 22344568889999999977
Q ss_pred EEEeC-CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe-CCc-EEEEEcCCCcceeeeecCCCCCCeeEEE
Q 010669 373 GTGTS-EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA-HDG-VKLWDLRKLKNFRSFESSDSETPTNSVD 449 (504)
Q Consensus 373 ~~g~~-dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~-~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~ 449 (504)
++++. ++.|.+||+.+++.+..+.... ...++|+|+|.++++++ .++ |.+||+.+++.+..+... ..+.+++
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~ 320 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP---THPNSLA 320 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC---SEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC---CCCCeEE
Confidence 76655 5999999999998887776543 36799999999776666 456 999999999888877653 4689999
Q ss_pred ECCCCCEEEEEeCc
Q 010669 450 FDHSGSYLAVASAD 463 (504)
Q Consensus 450 ~~~~g~~l~~~~~d 463 (504)
|+|+|++|+++..+
T Consensus 321 ~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 321 LSADGKTLYVSVKQ 334 (353)
T ss_dssp ECTTSCEEEEEEEC
T ss_pred EcCCCCEEEEEEcc
Confidence 99999977766543
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=6.3e-21 Score=184.30 Aligned_cols=231 Identities=12% Similarity=0.029 Sum_probs=179.3
Q ss_pred CEEEEEeCCCcEEEEcCCCCceEEEcccCcc--ceeEEEEeeCCCEE-EEEeCCCcEEEEeCCCCCCcceeEEecc-C--
Q 010669 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSK--KVTSVKFVTEGDLF-LTGSADKTVRVWQGSEDGNYDCKHTLKD-H-- 309 (504)
Q Consensus 236 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~l~~s~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~-h-- 309 (504)
+++++++.++.|.+||..+++.+..+..... .+..++|+|+++.+ ++++.++.|.+||+.++ .....+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG---ETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC---CEEEEEECCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC---CeEeeEEcCCcc
Confidence 4789999999999999999988887763322 48899999999765 55566889999999875 34443432 1
Q ss_pred --CcCeEEEEEccCCCEEEEEe------------CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE
Q 010669 310 --TAEVQAVTVHATNKYFVTAS------------LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375 (504)
Q Consensus 310 --~~~v~~l~~~p~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g 375 (504)
...+.+++|+|+++++++++ .++.|.+||+.+++....+.. ...+.+++|+|+|++++++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------PRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC------CSSCCCEEECTTSSCEEEE
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC------CCCcceeEECCCCCEEEEe
Confidence 22577899999999998886 579999999999988776652 2357789999999988887
Q ss_pred eCCCcEEEEEcCCCceeeeeeCC---------------------------------------------------------
Q 010669 376 TSEALVKIWDVKSQANVAKFDGH--------------------------------------------------------- 398 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~~~--------------------------------------------------------- 398 (504)
++.|.+||+.+++.+..+..+
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred --CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 688999999887655433221
Q ss_pred ---------CCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEE
Q 010669 399 ---------VGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVY 467 (504)
Q Consensus 399 ---------~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw 467 (504)
...+.+++|+|+|.+|+++ .+.|.+||+.+++.+..+... ..+.+++|+|+|++|++++.+ |.+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 231 MAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLP---HSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECS---SCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred ceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCC---CceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 1234568999999999988 334999999998887777653 467899999999999988766 9999
Q ss_pred EeeccCccceeEEEccCC
Q 010669 468 QVASVKADWNCIKTFPDL 485 (504)
Q Consensus 468 ~~~~~~~~~~~i~~~~~h 485 (504)
++ .+++.+..+..+
T Consensus 307 d~----~~~~~~~~~~~~ 320 (337)
T 1pby_B 307 DA----ETLEKKGQVDLP 320 (337)
T ss_dssp ET----TTCCEEEEEECG
T ss_pred EC----cCCcEEEEEEcC
Confidence 98 667777777654
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=3.6e-21 Score=206.47 Aligned_cols=267 Identities=10% Similarity=0.048 Sum_probs=187.0
Q ss_pred CeEEEEeccCCCEEEEEeCC---------CcEEEEcCCCCceEEEcc---cCccceeEEEEeeCCCEEEEEeCCCcEEEE
Q 010669 225 GIVSLDIHYSKDVIATGGVD---------TNAVLFDRPSGQIVTTLS---GHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~d---------g~i~vwd~~~~~~~~~~~---~h~~~v~~l~~s~~~~~l~s~s~dg~i~iw 292 (504)
.|.+++|||||++|++++.+ +.+++||+.+++. ..+. +|...+..++|+|||+.|+.++. +.|++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 48999999999999998764 7888999998876 3333 45556899999999999998886 799999
Q ss_pred eCCCCCCcceeEEeccCCcC------------------eEEEEEccCCCEEEEEeCCC----------------------
Q 010669 293 QGSEDGNYDCKHTLKDHTAE------------------VQAVTVHATNKYFVTASLDN---------------------- 332 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~------------------v~~l~~~p~~~~l~s~s~dg---------------------- 332 (504)
|+.++ ........+... +.++.|+|||++|++++.|+
T Consensus 140 ~~~~g---~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (723)
T 1xfd_A 140 AHVGK---QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (723)
T ss_dssp SSSSS---CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred ECCCC---ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence 99875 333333333332 37899999999999987653
Q ss_pred ------------eEEEEECCCCeEEEEeecCC-CCCCCCCeEEEEECCCCCEEEEEeC----CCcEEEEEcCCCceeeee
Q 010669 333 ------------TWCFYDLSSGICLTQVSDAG-TDGRPEGYTSAAFHPDGLILGTGTS----EALVKIWDVKSQANVAKF 395 (504)
Q Consensus 333 ------------~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~pdg~~l~~g~~----dg~I~iwd~~~~~~~~~~ 395 (504)
.|++||+.+++....+.... ...+...+..++|+|||+++++... +..|++||+.+++....+
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred cCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 79999999887544443110 0112467899999999998877643 357999999998876655
Q ss_pred eC-CCCCe----EEEEEcCCCcEEEEE--eCCc-------EEEEEc-CCCcc--eeeeecCCCCCCeeE-EEECCCCCEE
Q 010669 396 DG-HVGAV----TAISFSENGYYLATA--AHDG-------VKLWDL-RKLKN--FRSFESSDSETPTNS-VDFDHSGSYL 457 (504)
Q Consensus 396 ~~-~~~~i----~~l~~s~~g~~l~s~--~~d~-------v~vwd~-~~~~~--~~~~~~~~~~~~v~~-i~~~~~g~~l 457 (504)
.. +.+.+ ..++|+|||++|+.. ..++ |.+||+ ..+.. ...+... ...+.. ++|+|+|++|
T Consensus 297 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg~~l 374 (723)
T 1xfd_A 297 EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKGNKI 374 (723)
T ss_dssp EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTTTEE
T ss_pred EeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCCCEE
Confidence 43 33444 378999999977653 3332 777883 44331 3444322 234444 6999999999
Q ss_pred EEEeCc-----EEEEEeeccCccceeEEEccC---CCCCCceeEEEEeecCcc
Q 010669 458 AVASAD-----IRVYQVASVKADWNCIKTFPD---LSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 458 ~~~~~d-----i~vw~~~~~~~~~~~i~~~~~---h~~~~~v~~l~~~~~g~~ 502 (504)
+..+.+ ++||+++.... .....+.. | ...+..+.|+|+|+.
T Consensus 375 ~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~~~~~--~~~~~~~~~spdg~~ 423 (723)
T 1xfd_A 375 YFLSTEDLPRRRQLYSANTVGN--FNRQCLSCDLVE--NCTYFSASFSHSMDF 423 (723)
T ss_dssp EEEESSSCTTCCEEEEECSSTT--CCCBCSSTTSSS--SCCCCEEEECTTSSE
T ss_pred EEEEcCCCCcceEEEEEeCCCC--CCcceecccccC--CCCeEEEEECCCCCE
Confidence 766542 89999854321 12233332 4 567889999999874
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=3.6e-21 Score=201.28 Aligned_cols=250 Identities=14% Similarity=0.094 Sum_probs=182.2
Q ss_pred CCCeEEEEeccCCCEEEEEeC-CCcEEEEcCCCCceEEEcccCc-cceeEEEEeeCCCEEEEEeC---CCcEEEEeCCC-
Q 010669 223 KPGIVSLDIHYSKDVIATGGV-DTNAVLFDRPSGQIVTTLSGHS-KKVTSVKFVTEGDLFLTGSA---DKTVRVWQGSE- 296 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~s~s~---dg~i~iwd~~~- 296 (504)
..+|++++|+|||+.|++++. ||++.||++.+++. ..+..|. ..+..++|+|| +++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 346999999999999999887 99999999866555 4455455 68999999999 77777765 55567766544
Q ss_pred -CCCcceeEEeccCCcCeEEEEEccCCCE-EEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 297 -DGNYDCKHTLKDHTAEVQAVTVHATNKY-FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 297 -~~~~~~~~~~~~h~~~v~~l~~~p~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
.+. .. .+..+ ..+...+|+|+++. +++++.++.+.+||+.+++....... .. .+++|+|||++|++
T Consensus 99 ~~g~--~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~------~~--~~~~~spDG~~la~ 166 (582)
T 3o4h_A 99 RPGE--EQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL------PG--FGFVSDIRGDLIAG 166 (582)
T ss_dssp STTC--CE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE------SS--CEEEEEEETTEEEE
T ss_pred CCCc--cc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC------CC--ceEEECCCCCEEEE
Confidence 322 11 23222 23446688888863 33334444555999999876655431 11 78999999999998
Q ss_pred EeCC----CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc---EEEEEcCCCcceeeeecCCCCCCeeE
Q 010669 375 GTSE----ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG---VKLWDLRKLKNFRSFESSDSETPTNS 447 (504)
Q Consensus 375 g~~d----g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~---v~vwd~~~~~~~~~~~~~~~~~~v~~ 447 (504)
++.+ +.|++||+.+++.. .+..|.+.+..++|+|||++|+++..++ |++||+.+++.. .+..+ ...+..
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~--~~~~~~ 242 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP--SKDFSS 242 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS--CSHHHH
T ss_pred EEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC--CcChhh
Confidence 8777 78999999887754 5677888899999999999999777664 999999988765 44333 445566
Q ss_pred EE--------ECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 448 VD--------FDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 448 i~--------~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+. |+|||.++++++.+ +++|++ ++.+. .+ .+.|.+++|+ +|+.
T Consensus 243 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~------g~~~~---~~--~~~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 243 YRPTAITWLGYLPDGRLAVVARREGRSAVFID------GERVE---AP--QGNHGRVVLW-RGKL 295 (582)
T ss_dssp HCCSEEEEEEECTTSCEEEEEEETTEEEEEET------TEEEC---CC--SSEEEEEEEE-TTEE
T ss_pred hhhccccceeEcCCCcEEEEEEcCCcEEEEEE------CCeec---cC--CCceEEEEec-CCEE
Confidence 66 99999888888777 999997 33333 22 4568888888 7764
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=1.2e-20 Score=210.53 Aligned_cols=258 Identities=14% Similarity=0.115 Sum_probs=204.8
Q ss_pred cCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC-CceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS-GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
..|...+.++.|+++ .++++++.+|.+.+|.+.. +.....+..|. .+...+|+|+|+.|+.+ .++.|.+||...
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~-- 274 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDT-- 274 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTT--
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCc--
Confidence 578889999999988 6777888889999997643 44455666565 46778999999988887 488999999843
Q ss_pred CcceeEEecc-----------CCcCeEEEEEc-cCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCC-CeEEEEE
Q 010669 299 NYDCKHTLKD-----------HTAEVQAVTVH-ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE-GYTSAAF 365 (504)
Q Consensus 299 ~~~~~~~~~~-----------h~~~v~~l~~~-p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~ 365 (504)
..+..+.. |...+.+++|+ |+|+++++++ ++.|.+|++..+.... +. .+.. .+..++|
T Consensus 275 --~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~-----~~~~~~~~~~~~ 345 (1045)
T 1k32_A 275 --EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP-----EPLRIRYVRRGG 345 (1045)
T ss_dssp --CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CS-----CCSCEEEEEECS
T ss_pred --eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-cc-----CCCcceEEeeeE
Confidence 22334443 34578999999 9999999888 7899999998876543 22 3445 7899999
Q ss_pred CCCCCEEEEEeCCCcEE-EEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCC
Q 010669 366 HPDGLILGTGTSEALVK-IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSET 443 (504)
Q Consensus 366 ~pdg~~l~~g~~dg~I~-iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~ 443 (504)
+ ||+.|++++.++.+. +||+..++... +.+|...+..++|+|||++|++++.++ |++||+.+++.......+ ..
T Consensus 346 s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~--~~ 421 (1045)
T 1k32_A 346 D-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR--EA 421 (1045)
T ss_dssp S-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--SS
T ss_pred c-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC--CC
Confidence 9 999999998888898 99998776543 347878999999999999999999998 999999998876666444 56
Q ss_pred CeeEEEECCCCCEEEEEeC------------cEEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 444 PTNSVDFDHSGSYLAVASA------------DIRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 444 ~v~~i~~~~~g~~l~~~~~------------di~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.+.+++|+|||++|++++. .+++|++ ..++ +..+..| ...+..+.|+|+|+.
T Consensus 422 ~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~----~~g~-~~~l~~~--~~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM----EGRK-IFAATTE--NSHDYAPAFDADSKN 485 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET----TTTE-EEECSCS--SSBEEEEEECTTSCE
T ss_pred CccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC----CCCc-EEEeeCC--CcccCCceEcCCCCE
Confidence 7899999999999988754 2999998 4444 6677777 677889999999974
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.4e-21 Score=192.61 Aligned_cols=217 Identities=12% Similarity=0.146 Sum_probs=163.1
Q ss_pred CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC-------CCcceeE-----EeccCCcC
Q 010669 245 TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED-------GNYDCKH-----TLKDHTAE 312 (504)
Q Consensus 245 g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~-----~~~~h~~~ 312 (504)
+.+++|+... . .+...++.+++++++.++++++.|+ +++|+.... ....... ....+...
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 4688876531 1 1344689999999999999999988 888864310 0000011 11135678
Q ss_pred eEEEEEccCCCEEE----EEeCCCeEEEEECCCC--------eEEEEeecCCCCCCCCCeEEEEECCC-CCEEEEEeCCC
Q 010669 313 VQAVTVHATNKYFV----TASLDNTWCFYDLSSG--------ICLTQVSDAGTDGRPEGYTSAAFHPD-GLILGTGTSEA 379 (504)
Q Consensus 313 v~~l~~~p~~~~l~----s~s~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~~~v~~~~~~pd-g~~l~~g~~dg 379 (504)
|.+++|+|++++|+ +|+.|+.|++||++++ +.+..+.. ..+|...|.+++|+|+ +.+|++++.||
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL--LKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC--CCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeec--cCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 99999999999999 7888999999998764 22222221 2367889999999997 89999999999
Q ss_pred cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC-----CCCCeeEEEECCC
Q 010669 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD-----SETPTNSVDFDHS 453 (504)
Q Consensus 380 ~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~-----~~~~v~~i~~~~~ 453 (504)
.|++||++++..+....+|...|++++|+|+|.+|++|+.|+ |++||++ ++....+..+. +...+.++.|+++
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 999999999877777778889999999999999999999998 9999998 55555554332 1237899999999
Q ss_pred CCEEEEEe-Cc--------EEEEEeecc
Q 010669 454 GSYLAVAS-AD--------IRVYQVASV 472 (504)
Q Consensus 454 g~~l~~~~-~d--------i~vw~~~~~ 472 (504)
+.++++.+ .+ +++|++...
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceEEEEEccCCCccCCCCceEEEEeccC
Confidence 98886543 21 889998653
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=1.5e-19 Score=176.11 Aligned_cols=254 Identities=11% Similarity=0.102 Sum_probs=172.9
Q ss_pred CCcEEEEcC--CCCceEE-EcccCccceeEEEEeeCCCEEEEEeC---CCcEEEEeCCCCCCcceeEEeccCCcCeEEEE
Q 010669 244 DTNAVLFDR--PSGQIVT-TLSGHSKKVTSVKFVTEGDLFLTGSA---DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317 (504)
Q Consensus 244 dg~i~vwd~--~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~ 317 (504)
++.|.+|++ .+++... ....+...+..++|+|+|+ |++++. ++.|.+|++.++ ....+..+..+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCEEEE
Confidence 455777765 4555432 2334556788899999999 555544 689999999653 3334455455677889999
Q ss_pred EccCCCEEEEEe-CCCeEEEEECCC-Ce--EEEEeecCCCC----CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC-C
Q 010669 318 VHATNKYFVTAS-LDNTWCFYDLSS-GI--CLTQVSDAGTD----GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVK-S 388 (504)
Q Consensus 318 ~~p~~~~l~s~s-~dg~i~iwd~~~-~~--~~~~~~~~~~~----~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~-~ 388 (504)
|+|+|++|++++ .++.|.+||+.. +. .+..+...+.. .....+.+++|+|||++++++..++.|++||+. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999888888 689999999963 22 22332211110 012358899999999977777778999999998 4
Q ss_pred Ccee--eeeeCC-CCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCC--Ccc--eeeeecCCC----CCCeeEEEECCCCC
Q 010669 389 QANV--AKFDGH-VGAVTAISFSENGYYLATAAH-DG-VKLWDLRK--LKN--FRSFESSDS----ETPTNSVDFDHSGS 455 (504)
Q Consensus 389 ~~~~--~~~~~~-~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~--~~~--~~~~~~~~~----~~~v~~i~~~~~g~ 455 (504)
++.. ..+..+ ...+..++|+|||++|++++. ++ |.+|++.. ++. ...+..... ...+..++|+|+|+
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 5432 222222 236788999999997777654 45 99999874 332 222322211 14588899999999
Q ss_pred EEEEEeC-c--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 456 YLAVASA-D--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 456 ~l~~~~~-d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+|++++. + |.+|++... .....+..+..+ ...+.+++|+|+|+.
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~-g~~~~~~~~~~~--~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTAD-GHLTLIQQISTE--GDFPRDFDLDPTEAF 299 (347)
T ss_dssp EEEEEEETTTEEEEEEECGG-GCEEEEEEEECS--SSCCCEEEECTTSSE
T ss_pred EEEEEeCCCCEEEEEEECCC-CcEEEeEEEecC--CCCcCeEEECCCCCE
Confidence 8865543 3 999999532 245677777776 567899999999973
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=3.4e-20 Score=206.84 Aligned_cols=260 Identities=13% Similarity=0.053 Sum_probs=197.2
Q ss_pred CCCCeEEEEec-cCCCEEEEEeCCCcEEEEcCCCCceEEEcccCcc-ceeEEEEeeCCCEEEEEeCCCcEE-EEeCCCCC
Q 010669 222 SKPGIVSLDIH-YSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK-KVTSVKFVTEGDLFLTGSADKTVR-VWQGSEDG 298 (504)
Q Consensus 222 ~~~~I~~~~~s-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~s~~~~~l~s~s~dg~i~-iwd~~~~~ 298 (504)
|...+.+++|+ |+|++|++++ ++.|.+|+..+++.. .+..|.. .+..++|+ +|+.|++++.++.+. +||+.++
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~- 369 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG- 369 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC-
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC-
Confidence 34468999999 9999998887 789999999877654 4666777 89999999 999999999888888 8998764
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
. ...+.+|...+..++|+|+|++|++++.++.|++||+.+++...... .|...+.+++|+|||++|++++.+
T Consensus 370 --~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-----~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 370 --K-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER-----SREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp --C-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-----CSSSCCCCEEECTTSCEEEEEEEE
T ss_pred --C-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc-----CCCCCccceEECCCCCeEEEEecC
Confidence 2 23444788899999999999999999999999999999998776654 455678999999999999888765
Q ss_pred C----------cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc---------------
Q 010669 379 A----------LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN--------------- 432 (504)
Q Consensus 379 g----------~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~--------------- 432 (504)
+ .|++||+.+++ +..+..|...+..++|+|+|++|++++.++ ..+|+......
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP 520 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESST
T ss_pred ccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCC
Confidence 4 89999998877 667777888899999999999999988765 66676432211
Q ss_pred --------------------------eeeeecCCCCCCeeEEEECCCCCEEEE-----------EeC--cEEEEEeeccC
Q 010669 433 --------------------------FRSFESSDSETPTNSVDFDHSGSYLAV-----------ASA--DIRVYQVASVK 473 (504)
Q Consensus 433 --------------------------~~~~~~~~~~~~v~~i~~~~~g~~l~~-----------~~~--di~vw~~~~~~ 473 (504)
........+...+..++|+|+|.++++ .+. ...+|.++.
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~-- 598 (1045)
T 1k32_A 521 GSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV-- 598 (1045)
T ss_dssp TCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEET--
T ss_pred CCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEEC--
Confidence 000111112456789999999987875 111 244444433
Q ss_pred ccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 474 ADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 474 ~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.+.+. ..+. ..+.+++|+|+|+.
T Consensus 599 ~~~~~-~~l~-----~~v~~~~~S~DG~~ 621 (1045)
T 1k32_A 599 KTRKV-TEVK-----NNLTDLRLSADRKT 621 (1045)
T ss_dssp TTCCE-EEEE-----EEEEEEEECTTSCE
T ss_pred CCCcE-EEee-----cCcceEEECCCCCE
Confidence 22222 2222 35788999999974
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=3.5e-20 Score=198.26 Aligned_cols=241 Identities=11% Similarity=0.106 Sum_probs=179.7
Q ss_pred CCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCC-----CceEEEcccCccc--------------eeEEEEeeCCCEEEE
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS-----GQIVTTLSGHSKK--------------VTSVKFVTEGDLFLT 282 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~--------------v~~l~~s~~~~~l~s 282 (504)
+...+.+++|+|||++|+++ .++.|++|++.+ ++.......+... +.++.|+|||++|++
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 45568889999999999985 689999999998 7766655444443 489999999999998
Q ss_pred Ee---------------------------------CCCcEEEEeCCCCCCcceeEEe--ccCCcCeEEEEEccCCCEEEE
Q 010669 283 GS---------------------------------ADKTVRVWQGSEDGNYDCKHTL--KDHTAEVQAVTVHATNKYFVT 327 (504)
Q Consensus 283 ~s---------------------------------~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~l~~~p~~~~l~s 327 (504)
++ .++.|.+||+.++ ...... ..|...+.+++|+|+|++|++
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG---KTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT---EEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC---ceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 87 4578999999874 222222 246678999999999999999
Q ss_pred EeCCC-----eEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcC-CCceeeeeeCCC
Q 010669 328 ASLDN-----TWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP--DGLILGTGTSEALVKIWDVK-SQANVAKFDGHV 399 (504)
Q Consensus 328 ~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--dg~~l~~g~~dg~I~iwd~~-~~~~~~~~~~~~ 399 (504)
++.++ .|.+||+.+++....+...........+.+++|+| ||+++++++.+|.++||++. ++..+..+..+.
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~ 354 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE 354 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC
Confidence 88776 89999999983333332110111112346789999 99999999999999999886 667777787777
Q ss_pred CCeEE-EEEcCCCcEEEEEeCC-----c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc------EEE
Q 010669 400 GAVTA-ISFSENGYYLATAAHD-----G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD------IRV 466 (504)
Q Consensus 400 ~~i~~-l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d------i~v 466 (504)
..+.. ++|+|+|..|+.++.+ . |..||+.++. ...+. +...+.+++|+|+|++++..+.+ +.+
T Consensus 355 ~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~---~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l 430 (706)
T 2z3z_A 355 WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT---PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTV 430 (706)
T ss_dssp SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC---CSSSEEEEEECTTSSEEEEEEECSSCSCEEEE
T ss_pred eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc---CCCceEEEEECCCCCEEEEEecCCCCCcEEEE
Confidence 77877 7999999887665543 2 6677777655 33333 24568999999999988876432 888
Q ss_pred EEee
Q 010669 467 YQVA 470 (504)
Q Consensus 467 w~~~ 470 (504)
|++.
T Consensus 431 ~d~~ 434 (706)
T 2z3z_A 431 TNIG 434 (706)
T ss_dssp EESS
T ss_pred EECC
Confidence 9873
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=3.2e-20 Score=198.96 Aligned_cols=254 Identities=13% Similarity=0.089 Sum_probs=179.5
Q ss_pred EEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCcc---ceeEEEEeeCCCEEEEEeC---------CCcEEEEeCC
Q 010669 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK---KVTSVKFVTEGDLFLTGSA---------DKTVRVWQGS 295 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~s~s~---------dg~i~iwd~~ 295 (504)
++.|+|+|.++++ +.||.|++||+.+++....+.+|.. .+.+++|||||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965555 4699999999999988777766554 4899999999999998876 7899999998
Q ss_pred CCCCccee--EEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCC---------------
Q 010669 296 EDGNYDCK--HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE--------------- 358 (504)
Q Consensus 296 ~~~~~~~~--~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--------------- 358 (504)
++ ... ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++....... ++..
T Consensus 99 ~g---~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~----~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 99 NG---EFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN----GRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp TT---EECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC----CBTTTEEESSCCHHHHHHT
T ss_pred CC---ccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC----CCcCCeEcccccceeeeec
Confidence 75 221 122 25688999999999999886 78999999998876543211 2111
Q ss_pred --CeEEEEECCCCCEEEEEeCCC----------------------------------cEEEEEcCCCcee--------ee
Q 010669 359 --GYTSAAFHPDGLILGTGTSEA----------------------------------LVKIWDVKSQANV--------AK 394 (504)
Q Consensus 359 --~v~~~~~~pdg~~l~~g~~dg----------------------------------~I~iwd~~~~~~~--------~~ 394 (504)
...+++|+|||+.|++++.|. .|++||+.+++.. ..
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 125899999999999987552 7889999887643 22
Q ss_pred eeCCCCCeEEEEEcCCCcEEEEEeC--C--c-EEEEE----cCCCcceeeee----cCCCCCCee-----EEEECCCCCE
Q 010669 395 FDGHVGAVTAISFSENGYYLATAAH--D--G-VKLWD----LRKLKNFRSFE----SSDSETPTN-----SVDFDHSGSY 456 (504)
Q Consensus 395 ~~~~~~~i~~l~~s~~g~~l~s~~~--d--~-v~vwd----~~~~~~~~~~~----~~~~~~~v~-----~i~~~~~g~~ 456 (504)
+.+|...+..++|+||++++++... + . |.+|| +.+++....+. .+ ...+. .+.|+|+|+.
T Consensus 248 ~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR--TGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp HHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS--SSCSSSSSCCCCEECTTSSC
T ss_pred CCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccC--CceEccccCCccEECCCCCe
Confidence 3457788999999999987777442 2 2 88999 77776655442 22 34454 7899999996
Q ss_pred EEE--EeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 457 LAV--ASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 457 l~~--~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
++. +..+ .+||-++... .. ...+..+ ...+..+.++ +|+
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~--~~-~~~lt~~--~~~v~~~~~~-d~~ 368 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTV--EN-AIQITSG--KWEAINIFRV-TQD 368 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCS--TT-CEECSCS--SSCEEEEEEE-CSS
T ss_pred EEEEEEccCCceEEEEEECCC--Cc-eEecccC--ceEEEEEEEE-eCC
Confidence 654 3333 4555443222 22 3445444 4456666665 443
No 156
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=99.84 E-value=1.6e-21 Score=135.32 Aligned_cols=56 Identities=46% Similarity=0.814 Sum_probs=53.2
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccccCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTG 56 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 56 (504)
|+|+||+++|++||++|.||++|||++|++||+++|+||+||++|+.+||||++..
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Lip~~~~ 59 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPS 59 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCEECCCC
T ss_pred EEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcEECccC
Confidence 68999999999999996699999999999999999999999999999999999753
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=1.8e-18 Score=169.35 Aligned_cols=263 Identities=13% Similarity=0.147 Sum_probs=176.3
Q ss_pred CCEEEEEe----CCCcEEEEcC--CCCceEEEcccCccceeEEEEeeCCCEEEEEeCC----CcEEEEeCCCC-CCccee
Q 010669 235 KDVIATGG----VDTNAVLFDR--PSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD----KTVRVWQGSED-GNYDCK 303 (504)
Q Consensus 235 ~~~l~sg~----~dg~i~vwd~--~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d----g~i~iwd~~~~-~~~~~~ 303 (504)
..++++|+ .++.|++|++ .+++.......+...+..++|+|++++|++++.+ +.|.+|++... +....+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 34556664 3567888865 4555433222266778889999999999998886 79999998764 333444
Q ss_pred EEeccCCcCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeEEEEe----ecCCC-----CCCCCCeEEEEECCCCCEEE
Q 010669 304 HTLKDHTAEVQAVTVHATNKYFVTAS-LDNTWCFYDLSSGICLTQV----SDAGT-----DGRPEGYTSAAFHPDGLILG 373 (504)
Q Consensus 304 ~~~~~h~~~v~~l~~~p~~~~l~s~s-~dg~i~iwd~~~~~~~~~~----~~~~~-----~~~~~~v~~~~~~pdg~~l~ 373 (504)
.....+......+++ +++++++++ .++.|.+|++.....+..+ ...+. ..+...+.+++|+|||++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 444445566778888 788777776 5889999999754322111 11000 01123468899999999665
Q ss_pred EEe-CCCcEEEEEcCCCce------e-------eeeeCCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcc--eee
Q 010669 374 TGT-SEALVKIWDVKSQAN------V-------AKFDGHVGAVTAISFSENGYYLATAAH-DG-VKLWDLRKLKN--FRS 435 (504)
Q Consensus 374 ~g~-~dg~I~iwd~~~~~~------~-------~~~~~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~--~~~ 435 (504)
+++ .++.|++|++..... + .....+...+..++|+|+|++|++++. ++ |.+||+.++.. +..
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 554 588999999875431 1 111234456889999999998888774 55 99999986643 222
Q ss_pred eecC-CCCCCeeEEEECCCCCEEEEEe-C--c-EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 436 FESS-DSETPTNSVDFDHSGSYLAVAS-A--D-IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 436 ~~~~-~~~~~v~~i~~~~~g~~l~~~~-~--d-i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
+... .+......++|+|+|++|++++ . + +.+|+++........+..+.. ...+.+++|+|+|+.
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~ 319 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKY 319 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCE
Confidence 3221 1234568999999999986654 3 3 999999643344556666654 346789999999973
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=2.4e-18 Score=168.90 Aligned_cols=242 Identities=14% Similarity=0.133 Sum_probs=168.9
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCC-CCceEEEcccC-ccceeEEEEeeCCCE--EEEEe-------------CC
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRP-SGQIVTTLSGH-SKKVTSVKFVTEGDL--FLTGS-------------AD 286 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h-~~~v~~l~~s~~~~~--l~s~s-------------~d 286 (504)
..+..++|+|+|++|++++.+ .|.+|++. +++........ .+.+.+++|+|+|++ +++++ .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 357789999999999998887 99999987 77664433211 123567899999994 45553 68
Q ss_pred CcEEEEeCCCCCCcceeEEec----cCCcCeEEEEEccCCCEEEEEeC-CCeEEEEECC-CCeEEEEeecCCCCCCCCCe
Q 010669 287 KTVRVWQGSEDGNYDCKHTLK----DHTAEVQAVTVHATNKYFVTASL-DNTWCFYDLS-SGICLTQVSDAGTDGRPEGY 360 (504)
Q Consensus 287 g~i~iwd~~~~~~~~~~~~~~----~h~~~v~~l~~~p~~~~l~s~s~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v 360 (504)
|++.+|++...+ .....+. .+...+.+++|+|+|+++++++. ++.|.+||+. +++........ ...+...+
T Consensus 119 g~v~v~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~~g~~p 195 (365)
T 1jof_A 119 GYGNVFSVSETG--KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD-APDPGDHP 195 (365)
T ss_dssp CEEEEEEECTTC--CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE-CSSTTCCE
T ss_pred ceEEEEccCCCC--cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe-cCCCCCCC
Confidence 999999997533 2222222 24567999999999998887764 6799999998 67643221110 10123568
Q ss_pred EEEEECCCCCEEEEEeC-CCcEEEEEcC--CCcee---eee---e----CCCC------CeEEEE-EcCCCcEEEEEe--
Q 010669 361 TSAAFHPDGLILGTGTS-EALVKIWDVK--SQANV---AKF---D----GHVG------AVTAIS-FSENGYYLATAA-- 418 (504)
Q Consensus 361 ~~~~~~pdg~~l~~g~~-dg~I~iwd~~--~~~~~---~~~---~----~~~~------~i~~l~-~s~~g~~l~s~~-- 418 (504)
..++|+|||+++++++. ++.|.+|++. +++.. ..+ . +|.. .+..++ |+|||++|++++
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 99999999998887765 6899999875 45432 112 1 1222 488999 999999887764
Q ss_pred CC-----cEEEEEcC-CCcceee---eecCCCCCCeeEEEECC---CCCEEEEEeCc---EEEEEeec
Q 010669 419 HD-----GVKLWDLR-KLKNFRS---FESSDSETPTNSVDFDH---SGSYLAVASAD---IRVYQVAS 471 (504)
Q Consensus 419 ~d-----~v~vwd~~-~~~~~~~---~~~~~~~~~v~~i~~~~---~g~~l~~~~~d---i~vw~~~~ 471 (504)
.+ .|.+|++. +++.... .... ...+..++|+| +|++|++++.+ |.+|+++.
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~--~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTP--TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECS--SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecC--CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 23 59999996 5554321 2222 34567789999 89999998754 99999854
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.5e-18 Score=186.43 Aligned_cols=234 Identities=11% Similarity=0.107 Sum_probs=169.1
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccc-----eeEEEEeeCCCEEEEEeCC---------CcEE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKK-----VTSVKFVTEGDLFLTGSAD---------KTVR 290 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~l~~s~~~~~l~s~s~d---------g~i~ 290 (504)
...++.|+|||.+++++ ||.|++||+.+++....+.+|... ...+.|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35689999999998886 899999999999988777777643 2448899999999988876 5667
Q ss_pred EEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCC------------
Q 010669 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE------------ 358 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------------ 358 (504)
+||+.++ . ...+..|.+.+...+|+|||+.|+.+. |+.|++||+.++........ ++..
T Consensus 96 ~~d~~~~---~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~----g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 96 IYDLNKR---Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWT----GKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEETTTT---E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSC----CBTTTEEESBCCHHHH
T ss_pred EEECCCC---c-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCC----CCccceecCccccccc
Confidence 9999885 2 334567778899999999999999884 68999999998875433221 2111
Q ss_pred -----CeEEEEECCCCCEEEEEeCCC------------------------------------cEEEEEcCC---Cc--ee
Q 010669 359 -----GYTSAAFHPDGLILGTGTSEA------------------------------------LVKIWDVKS---QA--NV 392 (504)
Q Consensus 359 -----~v~~~~~~pdg~~l~~g~~dg------------------------------------~I~iwd~~~---~~--~~ 392 (504)
....+.|+|||+.|+.++.|. .|++||+.+ ++ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 223589999999998875321 488899988 63 22
Q ss_pred eeee------CCCCCeEEEEEcCCCcEEEEEeC----Cc-EEEEEcCCCc----c--eeeeecCCCCCCee-----EEEE
Q 010669 393 AKFD------GHVGAVTAISFSENGYYLATAAH----DG-VKLWDLRKLK----N--FRSFESSDSETPTN-----SVDF 450 (504)
Q Consensus 393 ~~~~------~~~~~i~~l~~s~~g~~l~s~~~----d~-v~vwd~~~~~----~--~~~~~~~~~~~~v~-----~i~~ 450 (504)
..+. +|...+..++|+|||++++.... +. |.+||+.+++ + +..+....+...+. .+.|
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 2333 37778999999999997665532 23 9999998877 2 22221111233333 7889
Q ss_pred CCCCCEEE-EEeCc-----EEEEEe
Q 010669 451 DHSGSYLA-VASAD-----IRVYQV 469 (504)
Q Consensus 451 ~~~g~~l~-~~~~d-----i~vw~~ 469 (504)
+|||+.++ ..+.. |.+|+.
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCCEEEEEEEcCCCceEEEEEEC
Confidence 99999877 66543 666665
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=2.7e-19 Score=191.76 Aligned_cols=267 Identities=9% Similarity=0.056 Sum_probs=180.6
Q ss_pred CeEEEEeccCCCEEEEEeC---------CCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 225 GIVSLDIHYSKDVIATGGV---------DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
.|.+++|||||++|++++. ++.|++||+.+++.+.... ....+..++|||||+.|+.+. ++.|++|++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 4789999999999998876 7899999999887621111 135689999999999999886 7899999997
Q ss_pred CCCCcceeEE-eccCCcCe-----------------EEEEEccCCCEEEEEeCCC-------------------------
Q 010669 296 EDGNYDCKHT-LKDHTAEV-----------------QAVTVHATNKYFVTASLDN------------------------- 332 (504)
Q Consensus 296 ~~~~~~~~~~-~~~h~~~v-----------------~~l~~~p~~~~l~s~s~dg------------------------- 332 (504)
++. .... ..++...| .++.|+|||++|++++.|.
T Consensus 139 ~g~---~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 139 GDP---PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp TSC---CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred CCC---cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 753 2221 12332222 4899999999999988652
Q ss_pred ---------eEEEEECCCCeEE--EEeec-CCCCCCCCCeEEEEECCCCCEEEEEeCC----CcEEEEE----cCCCcee
Q 010669 333 ---------TWCFYDLSSGICL--TQVSD-AGTDGRPEGYTSAAFHPDGLILGTGTSE----ALVKIWD----VKSQANV 392 (504)
Q Consensus 333 ---------~i~iwd~~~~~~~--~~~~~-~~~~~~~~~v~~~~~~pdg~~l~~g~~d----g~I~iwd----~~~~~~~ 392 (504)
.|++||+.+++.. ..+.. ....++...+..++|+||++++++.... ..|.+|| +.+++..
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7889999887642 11110 0011356678999999998887775433 2488999 8777766
Q ss_pred eee----eCCCCCeE-----EEEEcCCCcEEEE--EeCCc---EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEE
Q 010669 393 AKF----DGHVGAVT-----AISFSENGYYLAT--AAHDG---VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458 (504)
Q Consensus 393 ~~~----~~~~~~i~-----~l~~s~~g~~l~s--~~~d~---v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~ 458 (504)
..+ .+|.+.+. .+.|+|||..|+. +..++ |.+||+.+++ ...+... ...+..+.+. +++.|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~--~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 296 KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSG--KWEAINIFRV-TQDSLF 371 (719)
T ss_dssp GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCS--SSCEEEEEEE-CSSEEE
T ss_pred EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccC--ceEEEEEEEE-eCCEEE
Confidence 555 46777676 8899999986554 43443 8888887765 3334332 3457777777 777766
Q ss_pred EEeCc-------EEEEEeeccCcc--ceeEEE-ccCCCCCCceeEEEEeecCcc
Q 010669 459 VASAD-------IRVYQVASVKAD--WNCIKT-FPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 459 ~~~~d-------i~vw~~~~~~~~--~~~i~~-~~~h~~~~~v~~l~~~~~g~~ 502 (504)
..+.+ .++|.+...... ..++.. +.+| ...+..+.|+++|+.
T Consensus 372 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~--~~~~~~~~~s~dg~~ 423 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKE--RCQYYTASFSDYAKY 423 (719)
T ss_dssp EEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTT--TBCBEEEEECGGGSS
T ss_pred EEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCC--CCceEEEEECCCCCE
Confidence 65532 899998542211 122211 2224 456778888888763
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=2.1e-17 Score=159.80 Aligned_cols=244 Identities=13% Similarity=0.163 Sum_probs=183.8
Q ss_pred CCCeEEEEeccCCCEEEEEeCC------------------------CcEEEEcCCCCceEEEcc-cCccceeEEEEeeCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGVD------------------------TNAVLFDRPSGQIVTTLS-GHSKKVTSVKFVTEG 277 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~d------------------------g~i~vwd~~~~~~~~~~~-~h~~~v~~l~~s~~~ 277 (504)
-..+.+++++++|+++++...+ +.|.+||..+++.+..+. ++-.....++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4569999999999999988877 479999999898876664 445678999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCCCcceeEEe---------ccCCcCeEEEEEcc-CCCEEEEEe-CCCeEEEEECCCCeEEE
Q 010669 278 DLFLTGSADKTVRVWQGSEDGNYDCKHTL---------KDHTAEVQAVTVHA-TNKYFVTAS-LDNTWCFYDLSSGICLT 346 (504)
Q Consensus 278 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---------~~h~~~v~~l~~~p-~~~~l~s~s-~dg~i~iwd~~~~~~~~ 346 (504)
+++++...++.|++||..... ..+..+ ..+......++++| ++.++++.+ .++.|.+|| .++..+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 988888889999999976421 133443 23445689999999 788888876 689999999 5566665
Q ss_pred EeecCCC-----CCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCceeeeee--CCCCCeEEEEEcCCCcEEEEEe
Q 010669 347 QVSDAGT-----DGRPEGYTSAAFHPD-GLILGTGTSEALVKIWDVKSQANVAKFD--GHVGAVTAISFSENGYYLATAA 418 (504)
Q Consensus 347 ~~~~~~~-----~~~~~~v~~~~~~pd-g~~l~~g~~dg~I~iwd~~~~~~~~~~~--~~~~~i~~l~~s~~g~~l~s~~ 418 (504)
.+...+. .++......++++|+ +.++++...++.|++||..+++.+..+. .+...+..++|+| |..+++.+
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEEC
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCC
Confidence 5532211 122234789999998 7888888889999999998888888774 3556788999999 44443332
Q ss_pred -------CCc-EEEEEcCCCcceeeeec-CCCCCCeeEEEECCCCCEEEEEeCc--EEEEEee
Q 010669 419 -------HDG-VKLWDLRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVA 470 (504)
Q Consensus 419 -------~d~-v~vwd~~~~~~~~~~~~-~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~ 470 (504)
.+. |++||+.+++.+..+.. ..+...+..++++|+|.++++...+ |++|++.
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 233 99999999988877742 1224568999999999666666555 8888873
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=3.2e-18 Score=169.12 Aligned_cols=257 Identities=12% Similarity=0.030 Sum_probs=176.0
Q ss_pred EEeccCCCEEEEEeC-CC--cEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEE
Q 010669 229 LDIHYSKDVIATGGV-DT--NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHT 305 (504)
Q Consensus 229 ~~~s~~~~~l~sg~~-dg--~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 305 (504)
.+|+|||++|+.++. +| .|.+||+.+++......++...+..+.|+|||+.|+.++.++.|.+||+.++ .....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g---~~~~~ 117 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATL---EENVV 117 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTC---CEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCC---cceee
Confidence 789999999988887 66 4888899988887777777766667889999999999999999999999885 33333
Q ss_pred eccCCcCeEEEE--EccCCCEEEEE----------------------eCCCeEEEEECCCCeEEEEeecCCCCCCCCCeE
Q 010669 306 LKDHTAEVQAVT--VHATNKYFVTA----------------------SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361 (504)
Q Consensus 306 ~~~h~~~v~~l~--~~p~~~~l~s~----------------------s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 361 (504)
+..+...+.... ++|++.+++.. ..++.|.+||+.+++...... +...+.
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~------~~~~~~ 191 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ------ENQWLG 191 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE------ESSCEE
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec------CCcccc
Confidence 444545454443 48899988743 234689999999987654443 234688
Q ss_pred EEEECC-CCCEEEEEeCC------CcEEEEEcCCCceeeeeeCCC--CCeEEEEEcCCCcEEEEEeCC----c--EEEEE
Q 010669 362 SAAFHP-DGLILGTGTSE------ALVKIWDVKSQANVAKFDGHV--GAVTAISFSENGYYLATAAHD----G--VKLWD 426 (504)
Q Consensus 362 ~~~~~p-dg~~l~~g~~d------g~I~iwd~~~~~~~~~~~~~~--~~i~~l~~s~~g~~l~s~~~d----~--v~vwd 426 (504)
.++|+| ||+.|+....+ ..|.++|+..+... .+..+. ..+..+.|+|||+.|+..+.. . |++||
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 999999 99988877653 37888887655433 333333 257889999999977654431 2 99999
Q ss_pred cCCCcceeeeecCCCC---CCeeEEEECCCCCEEEEE---------eCc--EEEEEeeccCccceeEEEccCCCCCC---
Q 010669 427 LRKLKNFRSFESSDSE---TPTNSVDFDHSGSYLAVA---------SAD--IRVYQVASVKADWNCIKTFPDLSGTG--- 489 (504)
Q Consensus 427 ~~~~~~~~~~~~~~~~---~~v~~i~~~~~g~~l~~~---------~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~--- 489 (504)
+.+++........... .....+.|+|+|+.|+.. ..+ |.+|++ ..++ +..+..| ..
T Consensus 271 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~----~~~~-~~~l~~~--~~~~~ 343 (388)
T 3pe7_A 271 PETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM----KNGT-QHRVARH--DTSWK 343 (388)
T ss_dssp TTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET----TTTE-EEEEEEC--CCCCC
T ss_pred cCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec----cCCc-eEEeccc--cCccc
Confidence 9988743322221100 001223799999988753 222 888887 3333 3444444 23
Q ss_pred --------ceeEEEEeecCcc
Q 010669 490 --------AASFLFLFVLGQT 502 (504)
Q Consensus 490 --------~v~~l~~~~~g~~ 502 (504)
.+.+++|+|+|+.
T Consensus 344 ~~~~~~~~~~~~~~~spDg~~ 364 (388)
T 3pe7_A 344 VFEGDRQVTHPHPSFTPDDKQ 364 (388)
T ss_dssp CBTTBSSTTCCCCEECTTSSE
T ss_pred ccccccccCCCCccCCCCCCE
Confidence 4788899999963
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=9.4e-17 Score=151.68 Aligned_cols=238 Identities=13% Similarity=0.202 Sum_probs=178.3
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc------cCccceeEEEEe-eCCCEEEEEeC-CCcEEEE
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS------GHSKKVTSVKFV-TEGDLFLTGSA-DKTVRVW 292 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~s-~~~~~l~s~s~-dg~i~iw 292 (504)
++-....+++++++++++++...++.|.+||.. ++.+..+. ++...+.++++. +++.++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 345678999999999998888889999999987 66666653 244578999995 67766666543 7899999
Q ss_pred eCCCCCCcceeEEec-cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE
Q 010669 293 QGSEDGNYDCKHTLK-DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371 (504)
Q Consensus 293 d~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~ 371 (504)
|... .....+. .+...+.+++++|+|+++++...++.|.+||.. ++....+... .+...+..++++++|++
T Consensus 106 d~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~---~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 106 NQYG----QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS---KHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp CTTS----CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT---TTCSSEEEEEECSSSEE
T ss_pred CCCC----cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC---CccCCcEEEEECCCCCE
Confidence 9433 3444443 344578999999999988888888999999965 4445444321 23346899999999998
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeeeCC--CCCeEEEEEcCCCcEEEEEeCC--cEEEEEcCCCcceeeeecCCCCCCeeE
Q 010669 372 LGTGTSEALVKIWDVKSQANVAKFDGH--VGAVTAISFSENGYYLATAAHD--GVKLWDLRKLKNFRSFESSDSETPTNS 447 (504)
Q Consensus 372 l~~g~~dg~I~iwd~~~~~~~~~~~~~--~~~i~~l~~s~~g~~l~s~~~d--~v~vwd~~~~~~~~~~~~~~~~~~v~~ 447 (504)
+++...++.|++||. .++.+..+..+ ...+..++++++|.++++...+ .|.+||. +++.+..+..+.....+.+
T Consensus 178 ~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 178 FISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp EEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred EEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 888888999999997 45566666433 3578999999999988888765 4999995 5666666665433345789
Q ss_pred EEECCCCCEEEEEeCc-EEEEEe
Q 010669 448 VDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 448 i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
++++|+|+++++.... |++|++
T Consensus 256 i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 256 VALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp EEEETTTEEEEEETTTEEEEEEC
T ss_pred EEECCCCcEEEECCCCeEEEEEc
Confidence 9999999877774333 999997
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=3.4e-18 Score=164.99 Aligned_cols=206 Identities=10% Similarity=0.083 Sum_probs=161.4
Q ss_pred CeEEEEeccCCCEE-EEEeCCCcEEEEcCCCCceEEEccc-C----ccceeEEEEeeCCCEEEEEe------------CC
Q 010669 225 GIVSLDIHYSKDVI-ATGGVDTNAVLFDRPSGQIVTTLSG-H----SKKVTSVKFVTEGDLFLTGS------------AD 286 (504)
Q Consensus 225 ~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~-h----~~~v~~l~~s~~~~~l~s~s------------~d 286 (504)
.+..++|+|+|+++ ++++.++.|.+||+.+++.+..+.. + ...+.+++|+|+++++++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 36789999999865 5556688999999999988876653 2 23678899999999888886 57
Q ss_pred CcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC-C-----------
Q 010669 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT-D----------- 354 (504)
Q Consensus 287 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~----------- 354 (504)
+.|.+||+.++ .....+.. ...+.+++|+|++++++++ ++.|.+||+.+++....+..... .
T Consensus 115 ~~i~v~d~~~~---~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 188 (337)
T 1pby_B 115 TRVALYDAETL---SRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188 (337)
T ss_dssp CEEEEEETTTT---EEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred ceEEEEECCCC---cEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence 99999999775 44444443 4567889999999988888 68999999999887655532210 0
Q ss_pred -------------------------------------------------CCCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q 010669 355 -------------------------------------------------GRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385 (504)
Q Consensus 355 -------------------------------------------------~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd 385 (504)
.+...+.+++|+|||++++++ ++.|.+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d 266 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFD 266 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEE
Confidence 001234568999999999988 79999999
Q ss_pred cCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC
Q 010669 386 VKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 386 ~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~ 439 (504)
+.+++.+..+..+ ..+.+++|+|+|++|++++.++ |.+||+.+++.+..+...
T Consensus 267 ~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 267 LEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999888777643 4678999999999999888777 999999999888877654
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=4e-17 Score=159.75 Aligned_cols=238 Identities=13% Similarity=0.169 Sum_probs=167.0
Q ss_pred CCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEe----------CCCcEEEEeCCCCCCcceeEEecc----
Q 010669 243 VDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS----------ADKTVRVWQGSEDGNYDCKHTLKD---- 308 (504)
Q Consensus 243 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~~---- 308 (504)
.|+.|++||..+++.+..+..+..+ .++|+|+++++++++ .++.|.+||..+. +.+..+..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~---~~~~~i~~~~~~ 103 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL---TFEKEISLPPKR 103 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC---CEEEEEEECTTB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC---cEEEEEEcCccc
Confidence 4789999999999998888776655 899999999998886 3678999998765 44444432
Q ss_pred --CCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEE-eecCCCCCCCCCeEEEEECCCC-CEEEEEeCC----
Q 010669 309 --HTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQ-VSDAGTDGRPEGYTSAAFHPDG-LILGTGTSE---- 378 (504)
Q Consensus 309 --h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~pdg-~~l~~g~~d---- 378 (504)
+......++++|+|++++++.. ++.|.+||+.+++.+.. +... ....+.+.|++ ..+++.+.|
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-------~~~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-------GCWSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-------TEEEEEECTTSSSEEEEEETTSSEE
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-------CcceeEEcCCCCeeEEEECCCCcEE
Confidence 2245678999999999998874 58999999999988776 4321 01112233322 223333333
Q ss_pred --------------------------------------------CcEEEEEcCCCce--eeeeeC------C----CCCe
Q 010669 379 --------------------------------------------ALVKIWDVKSQAN--VAKFDG------H----VGAV 402 (504)
Q Consensus 379 --------------------------------------------g~I~iwd~~~~~~--~~~~~~------~----~~~i 402 (504)
+.|.++|+..... +..+.. + ....
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 256 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGY 256 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCS
T ss_pred EEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCe
Confidence 4444444433221 111100 0 0111
Q ss_pred EEEEEcCCCcEEEEEeC-----------Cc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 403 TAISFSENGYYLATAAH-----------DG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 403 ~~l~~s~~g~~l~s~~~-----------d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
..++|+|++..++++.. .. |.+||+.+++.+..+..+ . +.+++|+|+|++|++++.+ |.+||.
T Consensus 257 ~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~---~-p~~ia~spdg~~l~v~n~~~v~v~D~ 332 (361)
T 2oiz_A 257 NLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR---D-ALSMTIDQQRNLMLTLDGGNVNVYDI 332 (361)
T ss_dssp SCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT---T-CCEEEEETTTTEEEEECSSCEEEEEC
T ss_pred eEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC---C-eeEEEECCCCCEEEEeCCCeEEEEEC
Confidence 12789999887776643 23 999999999999988875 3 9999999999999988767 999998
Q ss_pred eccCccc--eeEEEccCCCCCCceeEEEEeecCcc
Q 010669 470 ASVKADW--NCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 470 ~~~~~~~--~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.++ +.+.++..+ ......+.+.|+|.+
T Consensus 333 ----~t~~l~~~~~i~~~--G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 333 ----SQPEPKLLRTIEGA--AEASLQVQFHPVGGT 361 (361)
T ss_dssp ----SSSSCEEEEEETTS--CSSEEEEEECCCSCC
T ss_pred ----CCCcceeeEEeccC--CCCcEEEEecCCCCC
Confidence 678 899997665 567788999999974
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=1e-17 Score=162.55 Aligned_cols=208 Identities=10% Similarity=0.044 Sum_probs=158.0
Q ss_pred CeEEEEeccCCCEE-EEEeCCCcEEEEcCCCCceEEEcccC------ccceeEEEEeeCCCEEEEEeCC-----------
Q 010669 225 GIVSLDIHYSKDVI-ATGGVDTNAVLFDRPSGQIVTTLSGH------SKKVTSVKFVTEGDLFLTGSAD----------- 286 (504)
Q Consensus 225 ~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h------~~~v~~l~~s~~~~~l~s~s~d----------- 286 (504)
.+..++|+|+|+++ +++..++.|.+||+.+++.+..+..+ ...+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 46789999999865 45557899999999999887776532 2347899999999999988865
Q ss_pred -CcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCC----------
Q 010669 287 -KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG---------- 355 (504)
Q Consensus 287 -g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~---------- 355 (504)
+.|.+||+.++.....+..+. +...+.+++|+|+++ +++++. .|.+||+.+++....+.......
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCcccee
Confidence 899999998743223333443 334688999999999 555544 49999999988776654221000
Q ss_pred -----------------------------------------------------CCCCeEEEEECC-CCCEEEEEeCCCcE
Q 010669 356 -----------------------------------------------------RPEGYTSAAFHP-DGLILGTGTSEALV 381 (504)
Q Consensus 356 -----------------------------------------------------~~~~v~~~~~~p-dg~~l~~g~~dg~I 381 (504)
+...+..++|+| +|++++++ ++.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v 277 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL 277 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence 011345778889 99999988 8899
Q ss_pred EEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC
Q 010669 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 382 ~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~ 439 (504)
.+||+.+++.+..+.. ...+.+++|+|+|.+|++++.++ |.+||+.+++.+..+...
T Consensus 278 ~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 9999999988777763 34578999999999888887777 999999999888877664
No 167
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=1.2e-17 Score=174.61 Aligned_cols=225 Identities=12% Similarity=0.123 Sum_probs=164.0
Q ss_pred CCCCeEEEEeccCCCEEEEEeC---CCcEEEEcCCC---CceEEEcccCccceeEEEEeeCCCE-EEEEeCCCcEEEEeC
Q 010669 222 SKPGIVSLDIHYSKDVIATGGV---DTNAVLFDRPS---GQIVTTLSGHSKKVTSVKFVTEGDL-FLTGSADKTVRVWQG 294 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~---dg~i~vwd~~~---~~~~~~~~~h~~~v~~l~~s~~~~~-l~s~s~dg~i~iwd~ 294 (504)
+...+.+++|+|| +++++++. +....+|.+.. +... .+..+. .+...+|+|+++. +++.+.++.+.+||+
T Consensus 63 ~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~ 139 (582)
T 3o4h_A 63 PINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYAL 139 (582)
T ss_dssp CCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEE
T ss_pred cccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEc
Confidence 3467999999999 77777765 45455654322 3333 343222 3446788988863 344444455669999
Q ss_pred CCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
.++ .... +..+.. .+++|+|||++|++++.+ +.|++||+.+++.. .+. .+...+..++|+|||+
T Consensus 140 ~~g---~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~-----~~~~~~~~~~~SpDG~ 207 (582)
T 3o4h_A 140 DGG---GLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD-----SGEGSFSSASISPGMK 207 (582)
T ss_dssp ETT---EEEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC-----CSSCEEEEEEECTTSC
T ss_pred cCC---cEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee-----cCCCccccceECCCCC
Confidence 874 3332 223333 789999999999988877 78999999988765 332 4556789999999999
Q ss_pred EEEEEeCCC--cEEEEEcCCCceeeeeeCCCCCeEEEE--------EcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC
Q 010669 371 ILGTGTSEA--LVKIWDVKSQANVAKFDGHVGAVTAIS--------FSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 371 ~l~~g~~dg--~I~iwd~~~~~~~~~~~~~~~~i~~l~--------~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~ 439 (504)
.|+++..+| .|++||+.+++.. .+.+|...+..+. |+|||.++++++.++ +++|++ ++... ..
T Consensus 208 ~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~ 281 (582)
T 3o4h_A 208 VTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---AP 281 (582)
T ss_dssp EEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CC
T ss_pred EEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cC
Confidence 999888888 8999999988877 7777777777777 999998889998888 999999 55443 11
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCc---EEEEEee
Q 010669 440 DSETPTNSVDFDHSGSYLAVASAD---IRVYQVA 470 (504)
Q Consensus 440 ~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~ 470 (504)
...+.+++|+ +|+++++++.+ ..+|.++
T Consensus 282 --~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 282 --QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp --SSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred --CCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 3568899999 99998887766 5566553
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.76 E-value=3.2e-16 Score=153.66 Aligned_cols=255 Identities=11% Similarity=0.053 Sum_probs=165.3
Q ss_pred EEEEEeCC--CcEEEEcC--CCCceEE--Ecc-cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC-CCCCcceeEEe--
Q 010669 237 VIATGGVD--TNAVLFDR--PSGQIVT--TLS-GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS-EDGNYDCKHTL-- 306 (504)
Q Consensus 237 ~l~sg~~d--g~i~vwd~--~~~~~~~--~~~-~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~-- 306 (504)
++++|+.. +.|.+|++ .+++... ... .....+..++|+|++++|++++.+ .|.+|++. ++ ......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g---~~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT---EIVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT---EEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC---CEEEeeEe
Confidence 34555543 46777664 4554422 221 233468899999999999998888 99999986 43 222221
Q ss_pred ccCCcCeEEEEEccCCCE--EEEEe-------------CCCeEEEEECC-CCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 307 KDHTAEVQAVTVHATNKY--FVTAS-------------LDNTWCFYDLS-SGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 307 ~~h~~~v~~l~~~p~~~~--l~s~s-------------~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
..+ +.+..++|+|+|++ +++++ .+|.+.+|++. .++....+..... .+...+.+++|+|||+
T Consensus 80 ~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 80 PIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY-QENTGIHGMVFDPTET 157 (365)
T ss_dssp ECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC-CTTCCEEEEEECTTSS
T ss_pred ecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe-CCCCcceEEEECCCCC
Confidence 111 23556899999994 44553 68999999997 4554433321000 1235689999999999
Q ss_pred EEEEEeC-CCcEEEEEcC-CCcee--eeee--CCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcC--CCcce---eeee
Q 010669 371 ILGTGTS-EALVKIWDVK-SQANV--AKFD--GHVGAVTAISFSENGYYLATAAHD-G-VKLWDLR--KLKNF---RSFE 437 (504)
Q Consensus 371 ~l~~g~~-dg~I~iwd~~-~~~~~--~~~~--~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~--~~~~~---~~~~ 437 (504)
++++++. ++.|++||+. +++.. ..+. .|...+..++|+|+|++|++++.. + |.+|++. +++.. ..+.
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 8887654 6899999998 66543 3333 235679999999999999888764 5 9999775 45432 1222
Q ss_pred cCCC-----CC------CeeEEE-ECCCCCEEEEEe---C-----cEEEEEeeccCccceeEE---EccCCCCCCceeEE
Q 010669 438 SSDS-----ET------PTNSVD-FDHSGSYLAVAS---A-----DIRVYQVASVKADWNCIK---TFPDLSGTGAASFL 494 (504)
Q Consensus 438 ~~~~-----~~------~v~~i~-~~~~g~~l~~~~---~-----di~vw~~~~~~~~~~~i~---~~~~h~~~~~v~~l 494 (504)
.... .. .+..++ |+|||++|++++ . .|.+|+++. +++... .+..+ ...+..+
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~---~g~~~~~~~~~~~~--~~~~~~~ 312 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD---CGSIEKQLFLSPTP--TSGGHSN 312 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT---TSCEEEEEEEEECS--SCCTTCC
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC---CCCEEEeeeeeecC--CCCcccc
Confidence 2110 11 478999 999999988764 2 389999842 233222 23333 3456778
Q ss_pred EEee---cCcc
Q 010669 495 FLFV---LGQT 502 (504)
Q Consensus 495 ~~~~---~g~~ 502 (504)
+|+| +|+.
T Consensus 313 a~sp~~~dg~~ 323 (365)
T 1jof_A 313 AVSPCPWSDEW 323 (365)
T ss_dssp CEEECTTCTTE
T ss_pred eecCCCcCCCE
Confidence 8888 6753
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=8.5e-16 Score=145.93 Aligned_cols=230 Identities=11% Similarity=0.090 Sum_probs=169.0
Q ss_pred CCCCeEEEEeccCCC-EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCc
Q 010669 222 SKPGIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~ 300 (504)
+.....+++|+|+|+ +++++..++.|..|+..++ ...+..+...+.+++++++|+++++...++.|.+||..++.
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~-- 101 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE-- 101 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC--
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc--
Confidence 344578999999998 7888888999999999876 56666677889999999999988777777899999986642
Q ss_pred ceeEEecc----CCcCeEEEEEccCCCEEEEE----e-------------CCCeEEEEECCCCeEEEEeecCCCCCCCCC
Q 010669 301 DCKHTLKD----HTAEVQAVTVHATNKYFVTA----S-------------LDNTWCFYDLSSGICLTQVSDAGTDGRPEG 359 (504)
Q Consensus 301 ~~~~~~~~----h~~~v~~l~~~p~~~~l~s~----s-------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 359 (504)
....... ....+.+++++|+|+++++. + ..+.|..+|.. +... .+. .+...
T Consensus 102 -~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~-----~~~~~ 173 (296)
T 3e5z_A 102 -WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-API-----RDRVK 173 (296)
T ss_dssp -EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEE-----CCCSS
T ss_pred -EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Eee-----cCCCC
Confidence 2211111 12346789999999988873 2 13466666665 4433 222 22345
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEcC-CCce---eeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceee
Q 010669 360 YTSAAFHPDGLILGTGTSEALVKIWDVK-SQAN---VAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRS 435 (504)
Q Consensus 360 v~~~~~~pdg~~l~~g~~dg~I~iwd~~-~~~~---~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~ 435 (504)
...++|+|+|+++++.+.++.|.+||+. .++. ...+..+.+.+.+++++++|.++++. .++|.+||.. ++.+..
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEE
Confidence 7899999999988777788999999997 4443 23333345667889999999877766 4459999986 777777
Q ss_pred eecCCCCCCeeEEEE-CCCCCEEEEEeCcEEEEEe
Q 010669 436 FESSDSETPTNSVDF-DHSGSYLAVASADIRVYQV 469 (504)
Q Consensus 436 ~~~~~~~~~v~~i~~-~~~g~~l~~~~~di~vw~~ 469 (504)
+..+ .. +.+++| .|+++.|++++.+ .+|.+
T Consensus 252 ~~~~--~~-~~~~~f~~~d~~~L~v~t~~-~l~~~ 282 (296)
T 3e5z_A 252 VLTP--QT-TSNLCFGGPEGRTLYMTVST-EFWSI 282 (296)
T ss_dssp EECS--SC-CCEEEEESTTSCEEEEEETT-EEEEE
T ss_pred EECC--CC-ceeEEEECCCCCEEEEEcCC-eEEEE
Confidence 7665 34 889999 6899999998887 45554
No 170
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=2e-15 Score=141.76 Aligned_cols=252 Identities=12% Similarity=0.090 Sum_probs=197.0
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceEEEcccCc-cceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccC-Cc
Q 010669 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS-KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDH-TA 311 (504)
Q Consensus 234 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h-~~ 311 (504)
.+++|++++.++.|++||..+|+.+.++..+. ..+.++.++|+|++++ +.++.|..||. ++ +.+..+..+ ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G---~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG---RELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS---CEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC---CEEEEEcCCCCc
Confidence 46889999999999999999999999998765 4789999999999888 45778999998 44 455556544 34
Q ss_pred CeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeEEEEeecCCC-CCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC
Q 010669 312 EVQAVTVHATNKYFVTASL-DNTWCFYDLSSGICLTQVSDAGT-DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQ 389 (504)
Q Consensus 312 ~v~~l~~~p~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~ 389 (504)
.+.++.+.++|+++++.+. ++.+..+|. +++.+..+..... ..+......+++.++|+++++...++.|..||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 6889999999999999887 888888886 6766666542211 1222345567889999999999999999999987 9
Q ss_pred ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC----CCCCeeEEEECCCCCEEEEEe---
Q 010669 390 ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD----SETPTNSVDFDHSGSYLAVAS--- 461 (504)
Q Consensus 390 ~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~----~~~~v~~i~~~~~g~~l~~~~--- 461 (504)
+.+.++... ..+.++.+.++|.++++++.++ |..||..+++.+..+.... ....+..+...++|.++++..
T Consensus 156 ~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~ 234 (276)
T 3no2_A 156 QLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 234 (276)
T ss_dssp CEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTT
T ss_pred CEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCc
Confidence 998888754 4566788899999999888887 9999999999988886432 123478889999999998874
Q ss_pred -------CcEEEEEeeccCccceeEEEccCCCCCCceeEEEEe
Q 010669 462 -------ADIRVYQVASVKADWNCIKTFPDLSGTGAASFLFLF 497 (504)
Q Consensus 462 -------~di~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~ 497 (504)
.+.+++++ ..+++.+-+|..+..-+.+.+++..
T Consensus 235 ~~~~~~~~~~~~~~~---~~~g~~~W~~~~~~~~~~~~~~~~~ 274 (276)
T 3no2_A 235 DREAGKGKHPQLVEI---DSEGKVVWQLNDKVKFGMISTICPI 274 (276)
T ss_dssp CTTGGGSCCCSEEEE---CTTSBEEEEECCTTTSCCCCEEEEE
T ss_pred cccccccCCceEEEE---CCCCCEEEEecCcccccceeeeeec
Confidence 23678988 3567888888887666777776543
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=1.2e-17 Score=165.31 Aligned_cols=222 Identities=10% Similarity=-0.018 Sum_probs=151.1
Q ss_pred eEEEEeccCCCEEEEEeCC---CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 226 IVSLDIHYSKDVIATGGVD---TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 226 I~~~~~s~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
+.+++|+|||++|+..... ..|.+||+.+++......++......+.|+|+|++|+.++.++.|.+||+.++ ..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~---~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL---EE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC---CE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC---Cc
Confidence 5678899999988776543 46888999887765444433333344889999999999999999999999875 22
Q ss_pred eEEeccCCcCeEE-------------------EEEccCCCEEEEE-----eCCCeEEEEECCCCeEEEEeecCCCCCCCC
Q 010669 303 KHTLKDHTAEVQA-------------------VTVHATNKYFVTA-----SLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358 (504)
Q Consensus 303 ~~~~~~h~~~v~~-------------------l~~~p~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 358 (504)
......+...... +.|+|+++.++.+ ..+..|.+||+.+++...... +..
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~------~~~ 188 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ------DTA 188 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE------ESS
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc------CCc
Confidence 2333323332222 3457777766554 356689999999887655442 234
Q ss_pred CeEEEEECC-CCCEEEEEeCC------CcEEEEEcCCCceeeeeeCC-CCCeEEEEEcCCCcEEEEEeCC-----c-EEE
Q 010669 359 GYTSAAFHP-DGLILGTGTSE------ALVKIWDVKSQANVAKFDGH-VGAVTAISFSENGYYLATAAHD-----G-VKL 424 (504)
Q Consensus 359 ~v~~~~~~p-dg~~l~~g~~d------g~I~iwd~~~~~~~~~~~~~-~~~i~~l~~s~~g~~l~s~~~d-----~-v~v 424 (504)
.+..+.|+| ++..|+..+.+ ..|.+||+..++........ ...+..+.|+|+|.+|+.++.+ + |++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 688999999 88877665543 36888998765433322211 2358889999999987766443 3 999
Q ss_pred EEcCCCcceeeeecCCCCCCeeEEEECC-CCCEEEEEe
Q 010669 425 WDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAVAS 461 (504)
Q Consensus 425 wd~~~~~~~~~~~~~~~~~~v~~i~~~~-~g~~l~~~~ 461 (504)
||+.+++........ ... +.|+| +|+++++++
T Consensus 269 ~d~~~g~~~~l~~~~----~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 269 ANPETLENEEVMVMP----PCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp ECTTTCCEEEEEECC----SEE-EEEECSSSSEEEEEE
T ss_pred EECCCCCeEEeeeCC----CCC-CCccCCCCceEEEec
Confidence 999887654333222 233 89999 999888754
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=4.2e-16 Score=165.30 Aligned_cols=262 Identities=9% Similarity=-0.032 Sum_probs=180.7
Q ss_pred cCCCCCeEEEEeccCCCEEEEE--eCCCcEEEEcCCCCceEEEcccCcccee---------EEEEe--eCCCE-EEEEeC
Q 010669 220 KTSKPGIVSLDIHYSKDVIATG--GVDTNAVLFDRPSGQIVTTLSGHSKKVT---------SVKFV--TEGDL-FLTGSA 285 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~sg--~~dg~i~vwd~~~~~~~~~~~~h~~~v~---------~l~~s--~~~~~-l~s~s~ 285 (504)
.+|...+..++|++++-+++.. +.++...||....+.....+..|...+. ...|+ |||+. |+.++.
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 3466789999999876666666 5588899998655555677777776666 66676 89998 666554
Q ss_pred -CCcEEEEeCC--CCCCcceeEEecc-----CCcCeEEEEEccCCCEEEEEeCC----------CeEEEEECCC------
Q 010669 286 -DKTVRVWQGS--EDGNYDCKHTLKD-----HTAEVQAVTVHATNKYFVTASLD----------NTWCFYDLSS------ 341 (504)
Q Consensus 286 -dg~i~iwd~~--~~~~~~~~~~~~~-----h~~~v~~l~~~p~~~~l~s~s~d----------g~i~iwd~~~------ 341 (504)
+..|.+|++. ..+ . ...+.. |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 100 ~~~~l~~~~~~~~g~~--~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGA--V-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp TTCCEEEECTTSTTCC--C-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CCCeEEEEcCCCCCCC--C-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 5567677665 202 1 233344 66788999999999999998877 5899999988
Q ss_pred CeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC--------CcEEEEEcC-CC---ceeeeeeCCCCCeEEEEEcC
Q 010669 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE--------ALVKIWDVK-SQ---ANVAKFDGHVGAVTAISFSE 409 (504)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d--------g~I~iwd~~-~~---~~~~~~~~~~~~i~~l~~s~ 409 (504)
+... .+.. .+...+..++|+|||+.|+.++.+ ..|++||+. ++ +......+|...+..+.|+|
T Consensus 177 ~~~~-~l~~----~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp 251 (662)
T 3azo_A 177 SAVR-ELSD----DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP 251 (662)
T ss_dssp GGSE-ESSC----SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT
T ss_pred Ccee-EEEe----cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC
Confidence 5433 2220 123467789999999999887754 379999998 56 44444444577899999999
Q ss_pred CCcEEEEEeCCc---EEEEEcCCCcceeeeecCCCC------CCeeEEEECCCCCEEEEEeCc-EEEEEeeccCccceeE
Q 010669 410 NGYYLATAAHDG---VKLWDLRKLKNFRSFESSDSE------TPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCI 479 (504)
Q Consensus 410 ~g~~l~s~~~d~---v~vwd~~~~~~~~~~~~~~~~------~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i 479 (504)
||+++++++.++ |.+||+.+++.......+... ..+..++|+|++.++++++.. ++||.++.. ...+
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~---~~~~ 328 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPE---SGEL 328 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETT---TTEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECC---CCcE
Confidence 999777777665 667776566543322221100 015678999999998887655 888876432 2236
Q ss_pred EEccCCCCCCceeEE
Q 010669 480 KTFPDLSGTGAASFL 494 (504)
Q Consensus 480 ~~~~~h~~~~~v~~l 494 (504)
..+..| .+.+..+
T Consensus 329 ~~l~~~--~~~~~~~ 341 (662)
T 3azo_A 329 VDAAGP--WTEWAAT 341 (662)
T ss_dssp EECCSS--CCEEEEE
T ss_pred EEecCC--CCeEEEE
Confidence 677766 5566655
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=1.1e-16 Score=158.15 Aligned_cols=245 Identities=8% Similarity=0.010 Sum_probs=164.3
Q ss_pred cccCCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEE--eeCCCEEEEE------------
Q 010669 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF--VTEGDLFLTG------------ 283 (504)
Q Consensus 218 ~~~~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~--s~~~~~l~s~------------ 283 (504)
+...+...+..+.|+|||+.|+.++.++.|++||+.+++....+..+...+....| ++++.+++..
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccc
Confidence 33444445556789999999999999999999999999877666666665554444 7888887642
Q ss_pred ----------eCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCC------CeEEEEECCCCeEEE
Q 010669 284 ----------SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLD------NTWCFYDLSSGICLT 346 (504)
Q Consensus 284 ----------s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~d------g~i~iwd~~~~~~~~ 346 (504)
+.++.|.+||+.++ . ...+..+...+..+.|+| +|+.|+.++.+ ..|.++|+..+...
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g---~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~- 229 (388)
T 3pe7_A 155 WKKFHEFYFTKPCCRLMRVDLKTG---E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR- 229 (388)
T ss_dssp HHHHHHHGGGCCCEEEEEEETTTC---C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-
T ss_pred cchhhhhhccCCcceEEEEECCCC---c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-
Confidence 24578999999875 2 334445667789999999 99988887763 37888888766433
Q ss_pred EeecCCCCCCCCCeEEEEECCCCCEEEEEeC-CC----cEEEEEcCCCce--eeeeeCCCC---CeEEEEEcCCCcEEEE
Q 010669 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTS-EA----LVKIWDVKSQAN--VAKFDGHVG---AVTAISFSENGYYLAT 416 (504)
Q Consensus 347 ~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~-dg----~I~iwd~~~~~~--~~~~~~~~~---~i~~l~~s~~g~~l~s 416 (504)
.+... .....+....|+|||+.|+..+. ++ .|++||+.+++. +..+.++.. ....+.|+|||..|+.
T Consensus 230 ~l~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 230 KVKTH---AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp ESCCC---CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--
T ss_pred EeeeC---CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCccee
Confidence 23210 11135778899999997755432 22 399999998864 333333110 0122379999988875
Q ss_pred E---------eCCc-EEEEEcCCCcceeeeecCCC---------CCCeeEEEECCCCCEEEEEeCc---EEEEEeec
Q 010669 417 A---------AHDG-VKLWDLRKLKNFRSFESSDS---------ETPTNSVDFDHSGSYLAVASAD---IRVYQVAS 471 (504)
Q Consensus 417 ~---------~~d~-v~vwd~~~~~~~~~~~~~~~---------~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~ 471 (504)
. ..+. |++||+.+++.. .+..+.. ...+..++|+|||+.|+..+.. ..||.++.
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ----------CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EeeeccccccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 4 2334 999999887653 3333311 0046788999999999887754 77777644
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=9e-16 Score=148.25 Aligned_cols=263 Identities=11% Similarity=0.045 Sum_probs=183.6
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCccee
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
..|.++.|++++..++..+.++.+..| .++....+..+...+.+++|++++++++++..++.|.+||..++ ...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~---~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK---EIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC---CEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC---cEE
Confidence 346788899988877777788889999 35666677777778899999999998888888999999998764 233
Q ss_pred EEeccCCcCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC--
Q 010669 304 HTLKDHTAEVQAVTVHATNKYFVTASLD----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS-- 377 (504)
Q Consensus 304 ~~~~~h~~~v~~l~~~p~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~-- 377 (504)
.....+...+.+++++|+++++++...+ +.|.+||..++.....+... .....+..++++|+|+++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL---STAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS---SSCCCEEEEEECTTSCEEEEECCCB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC---ccCCcccceEECCCCCEEEEecccc
Confidence 2222456789999999999988877766 68999999887654333211 22356899999999998877653
Q ss_pred ----CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe-CCc-EEEEEcCC-Ccceeee-----ecCCCCCCe
Q 010669 378 ----EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA-HDG-VKLWDLRK-LKNFRSF-----ESSDSETPT 445 (504)
Q Consensus 378 ----dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~-~d~-v~vwd~~~-~~~~~~~-----~~~~~~~~v 445 (504)
.+.|..||...++... +..+...+..++|+|+|.+|+.+. .++ |.+||+.+ +..+..+ ........+
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 235 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGP 235 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEE
T ss_pred ccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCC
Confidence 3567777765544332 322334688999999998665554 344 99999964 3332211 111111367
Q ss_pred eEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCC----CCceeEEEEeecCc
Q 010669 446 NSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG----TGAASFLFLFVLGQ 501 (504)
Q Consensus 446 ~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~----~~~v~~l~~~~~g~ 501 (504)
..++++++|+++++...+ |.+|+. .++.+..+..+.. ...+.+++|.++|.
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~-----~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNK-----RGYPIGQILIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECT-----TSCEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred CceEECCCCCEEEEEcCCCEEEEECC-----CCCEEEEEEcCCCccccccCcceEEECCCCC
Confidence 889999999987777554 888874 3455555544310 12688999988874
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=1.1e-14 Score=140.66 Aligned_cols=240 Identities=11% Similarity=0.139 Sum_probs=170.5
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCC----CcEEEEeCCC
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD----KTVRVWQGSE 296 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d----g~i~iwd~~~ 296 (504)
.+...+.+++|+++|++++++..++.|.+||..+++.......+...+.+++|++++++++++..+ +.|.+||..+
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 344567899999999988888889999999998887665444566789999999999887777666 6899999876
Q ss_pred CCCcceeEEec--cCCcCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC
Q 010669 297 DGNYDCKHTLK--DHTAEVQAVTVHATNKYFVTASL------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD 368 (504)
Q Consensus 297 ~~~~~~~~~~~--~h~~~v~~l~~~p~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd 368 (504)
.. ....+. .+...+.++.++|+|+++++... .+.|..||..+++....... ...+..++|+|+
T Consensus 122 ~~---~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~i~~~~d 192 (333)
T 2dg1_A 122 DN---LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------ISVANGIALSTD 192 (333)
T ss_dssp CS---CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------ESSEEEEEECTT
T ss_pred CE---EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC------CCcccceEECCC
Confidence 42 221221 24457899999999988777654 35677777665544332211 134788999999
Q ss_pred CCEEE-EEeCCCcEEEEEcCC-Cceeee--------eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeee
Q 010669 369 GLILG-TGTSEALVKIWDVKS-QANVAK--------FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 369 g~~l~-~g~~dg~I~iwd~~~-~~~~~~--------~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~ 437 (504)
|+.++ +.+.++.|.+||+.. +..+.. +.++ ..+..++++++|.++++...++ |.+||. +++.+..+.
T Consensus 193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~ 270 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQIL 270 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEE
Confidence 98554 445678999999964 332221 1222 4678899999999888776666 999998 466666665
Q ss_pred cCCC----CCCeeEEEECCCCCEEEEEeCc------EEEEEeec
Q 010669 438 SSDS----ETPTNSVDFDHSGSYLAVASAD------IRVYQVAS 471 (504)
Q Consensus 438 ~~~~----~~~v~~i~~~~~g~~l~~~~~d------i~vw~~~~ 471 (504)
.... ...+.+++|+|++..|++++.+ ..||.+..
T Consensus 271 ~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 271 IPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp CTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred cCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 4321 1158899999998777655443 57887744
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=1.7e-15 Score=162.00 Aligned_cols=240 Identities=10% Similarity=0.083 Sum_probs=169.6
Q ss_pred CCCCCeEEEEeccCCCEEEEEeCCC-----cEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCc-------
Q 010669 221 TSKPGIVSLDIHYSKDVIATGGVDT-----NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT------- 288 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~------- 288 (504)
+|...+..++|||||++|+.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3444688999999999998776543 8999999999876543322 23678999999999998888766
Q ss_pred ---------EEEEeCCCCCCc-ceeEEeccCCcCeEEEEEccCCCEEEEEeC-----CCeEEEEECCC------Ce-EEE
Q 010669 289 ---------VRVWQGSEDGNY-DCKHTLKDHTAEVQAVTVHATNKYFVTASL-----DNTWCFYDLSS------GI-CLT 346 (504)
Q Consensus 289 ---------i~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~-----dg~i~iwd~~~------~~-~~~ 346 (504)
|++|++.++... ..+.....|...+..+.|+|+|++|+.++. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999775311 122222335566889999999999888765 56899999986 42 233
Q ss_pred EeecCCCCCCCCCeEEEEECCCCCEEEEEeCC----CcEEEEEcCCCc--eeeeeeCCCC--CeEEEEEcCCCcEEEEEe
Q 010669 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE----ALVKIWDVKSQA--NVAKFDGHVG--AVTAISFSENGYYLATAA 418 (504)
Q Consensus 347 ~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d----g~I~iwd~~~~~--~~~~~~~~~~--~i~~l~~s~~g~~l~s~~ 418 (504)
.+.. +...+.. .|+|+|..|+..+.. +.|.+||+.++. ....+..|.. .+..+.|++++.++++..
T Consensus 281 ~l~~-----~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 281 KLID-----NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp EEEC-----SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred EeeC-----CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 3431 2223333 588888877766553 369999998764 2344544543 688899998888888888
Q ss_pred CCc---EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEE-eC-c----EEEEEe
Q 010669 419 HDG---VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA-SA-D----IRVYQV 469 (504)
Q Consensus 419 ~d~---v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~-~~-d----i~vw~~ 469 (504)
.++ |.+||+.+++.+..+..+ ...+..+.++|++..++.. +. . +.+||+
T Consensus 355 ~~g~~~l~~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGALLKIFPLE--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp ETTEEEEEEEETTTCCEEEEECCC--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred ECCEEEEEEEECCCCCEEEecCCC--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 775 778888777766666654 5678889999999766644 22 2 566665
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=3.1e-16 Score=168.49 Aligned_cols=265 Identities=9% Similarity=0.069 Sum_probs=172.2
Q ss_pred EEEEeccCCCEEEEEeCC---------CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCC
Q 010669 227 VSLDIHYSKDVIATGGVD---------TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 227 ~~~~~s~~~~~l~sg~~d---------g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~ 297 (504)
..+.|||||++|+.++.+ +.+.+||+.+++.. .+..|.+.+...+|||||+.|+.+. |+.|.+|+..++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 458899999999998875 56779999988754 4667788899999999999998874 689999998775
Q ss_pred CCcceeEEeccCCcCe-----------------EEEEEccCCCEEEEEeCCC----------------------------
Q 010669 298 GNYDCKHTLKDHTAEV-----------------QAVTVHATNKYFVTASLDN---------------------------- 332 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v-----------------~~l~~~p~~~~l~s~s~dg---------------------------- 332 (504)
.. ...+..++...+ ..+.|+|||++|+.++.|.
T Consensus 143 ~~--~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~ 220 (740)
T 4a5s_A 143 PS--YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPK 220 (740)
T ss_dssp CC--EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCB
T ss_pred ce--EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCC
Confidence 31 111122332222 3589999999999875332
Q ss_pred --------eEEEEECCC---Ce--EEEEeecC-CCCCCCCCeEEEEECCCCCEEEEEeC----CCcEEEEEcCCCc----
Q 010669 333 --------TWCFYDLSS---GI--CLTQVSDA-GTDGRPEGYTSAAFHPDGLILGTGTS----EALVKIWDVKSQA---- 390 (504)
Q Consensus 333 --------~i~iwd~~~---~~--~~~~~~~~-~~~~~~~~v~~~~~~pdg~~l~~g~~----dg~I~iwd~~~~~---- 390 (504)
.|++||+.+ +. ....+... ...++...+..++|+|||++++.... +..|++||+.+++
T Consensus 221 ~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 478889888 63 12222210 00025567899999999997665533 3479999998887
Q ss_pred ee--eee--eCCCCCeE-----EEEEcCCCcEEE-EEeCC-c---EEEEEcCCCcceeeeecCCCCCCeeEEE-ECCCCC
Q 010669 391 NV--AKF--DGHVGAVT-----AISFSENGYYLA-TAAHD-G---VKLWDLRKLKNFRSFESSDSETPTNSVD-FDHSGS 455 (504)
Q Consensus 391 ~~--~~~--~~~~~~i~-----~l~~s~~g~~l~-s~~~d-~---v~vwd~~~~~~~~~~~~~~~~~~v~~i~-~~~~g~ 455 (504)
+. ..+ .+|...|. .+.|+|||+.|+ ..+.+ | |++||+..+.... +... ...+..+. |+ ++
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g--~~~v~~~~~~d--~~ 375 (740)
T 4a5s_A 301 CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKG--TWEVIGIEALT--SD 375 (740)
T ss_dssp ECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCS--SSCEEEEEEEC--SS
T ss_pred eeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccC--CEEEEEEEEEe--CC
Confidence 22 222 44555544 789999999877 66543 3 9999998765443 3222 34455544 44 55
Q ss_pred EEE-EEeC--c----EEEEEeeccCccceeEEEccCC--CCCCceeEEEEeecCcc
Q 010669 456 YLA-VASA--D----IRVYQVASVKADWNCIKTFPDL--SGTGAASFLFLFVLGQT 502 (504)
Q Consensus 456 ~l~-~~~~--d----i~vw~~~~~~~~~~~i~~~~~h--~~~~~v~~l~~~~~g~~ 502 (504)
.|+ +++. + ..||.++... ......+... .....+....|+++|+.
T Consensus 376 ~i~f~~~~~~~~~~~~~ly~v~~~g--~~~~~~lt~~~~~~~~~~~~~~~S~dg~~ 429 (740)
T 4a5s_A 376 YLYYISNEYKGMPGGRNLYKIQLID--YTKVTCLSCELNPERCQYYSVSFSKEAKY 429 (740)
T ss_dssp EEEEEESCGGGCTTCBEEEEEETTE--EEEEEESSTTTSTTTBCBEEEEECTTSSE
T ss_pred EEEEEEecCCCCCceeEEEEEECCC--CCcceeeccccCCCCCceEEEEECCCCCE
Confidence 544 4444 2 7888774422 2222123211 01356788889988864
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=1.2e-15 Score=161.78 Aligned_cols=234 Identities=12% Similarity=0.043 Sum_probs=159.2
Q ss_pred EEEec--cCCCE-EEEEeC-CCcEEEEcCC--C-CceEEEccc-----CccceeEEEEeeCCCEEEEEeCC---------
Q 010669 228 SLDIH--YSKDV-IATGGV-DTNAVLFDRP--S-GQIVTTLSG-----HSKKVTSVKFVTEGDLFLTGSAD--------- 286 (504)
Q Consensus 228 ~~~~s--~~~~~-l~sg~~-dg~i~vwd~~--~-~~~~~~~~~-----h~~~v~~l~~s~~~~~l~s~s~d--------- 286 (504)
...|+ |||+. |+.++. +..|++|++. . ++ ...+.. |...+.+++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 34454 99998 766553 5678888876 3 43 445555 67788999999999999988876
Q ss_pred -CcEEEEeCCCCC--C-cceeEEec-cCCcCeEEEEEccCCCEEEEEeCC--------CeEEEEECC-CCe--EEEEeec
Q 010669 287 -KTVRVWQGSEDG--N-YDCKHTLK-DHTAEVQAVTVHATNKYFVTASLD--------NTWCFYDLS-SGI--CLTQVSD 350 (504)
Q Consensus 287 -g~i~iwd~~~~~--~-~~~~~~~~-~h~~~v~~l~~~p~~~~l~s~s~d--------g~i~iwd~~-~~~--~~~~~~~ 350 (504)
..|.+||+.+.. . ... ..+. .+...+..+.|+|||++|+.++.+ ..|.+||+. ++. ....+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 589999987620 0 022 3444 555678889999999999988755 379999999 561 2233321
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCceeeeeeCCCCC--------eEEEEEcCCCcEEEEEeCC
Q 010669 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEA--LVKIWDVKSQANVAKFDGHVGA--------VTAISFSENGYYLATAAHD 420 (504)
Q Consensus 351 ~~~~~~~~~v~~~~~~pdg~~l~~g~~dg--~I~iwd~~~~~~~~~~~~~~~~--------i~~l~~s~~g~~l~s~~~d 420 (504)
.+...+..+.|+|||++++++..+| .|.+||+.+++.......+... +..++|++++.++++++.
T Consensus 239 ----~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 239 ----GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp ----ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred ----CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 2346789999999999888888888 6667776666654433333222 567899999999999988
Q ss_pred c-EEEE--EcCCCcceeeeecCCCCCCeeEE-EECCCCCEEEEEeCc--EEEEEeec
Q 010669 421 G-VKLW--DLRKLKNFRSFESSDSETPTNSV-DFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 421 ~-v~vw--d~~~~~~~~~~~~~~~~~~v~~i-~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
+ ++|| |+.+++ +..+..+ ...+..+ +++.+.-++++++.+ ..||.++.
T Consensus 314 ~~~~l~~~d~~~~~-~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 314 GAAVLGILDPESGE-LVDAAGP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp SSCEEEEEETTTTE-EEECCSS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred CccEEEEEECCCCc-EEEecCC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 7 7777 655554 4555443 4456666 554443344445555 67776643
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=5.8e-15 Score=137.88 Aligned_cols=234 Identities=12% Similarity=0.044 Sum_probs=164.3
Q ss_pred CeEEEEeccCCCEEE-EEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCccee
Q 010669 225 GIVSLDIHYSKDVIA-TGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
...+++++++|++++ +.+.++.|.+|+..++........+...+.+++++++++++++.. ++.|.+||.... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~----~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN----NQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS----CC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc----eE
Confidence 578999999999777 547788999999765543322233445688999999998666655 889999998653 22
Q ss_pred EEec-cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 010669 304 HTLK-DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382 (504)
Q Consensus 304 ~~~~-~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~ 382 (504)
..+. .....+.+++++++|+.+++...++.|.+||..+........ .....+.+++++++|+++++...++.|.
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-----TGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-----CSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-----ccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 2222 233568999999999988877778999999866554332211 2223578899999999888877788999
Q ss_pred EEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEe
Q 010669 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS 461 (504)
Q Consensus 383 iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~ 461 (504)
+||............+...+.+++++++|.++++...++ |.+||........ ... .....+.+++++++|+++++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~-~~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 175 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF-TGLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp EECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC-CSCSCEEEEEECTTCCEEEEEG
T ss_pred EEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ecc-CCCCCceeEEECCCCCEEEEEC
Confidence 999877655443333446789999999997777766665 9999987544322 221 1135689999999998777766
Q ss_pred Cc--EEEEEee
Q 010669 462 AD--IRVYQVA 470 (504)
Q Consensus 462 ~d--i~vw~~~ 470 (504)
.+ |++|++.
T Consensus 253 ~~~~v~~~~~~ 263 (270)
T 1rwi_B 253 GNDRVVKLTSL 263 (270)
T ss_dssp GGTEEEEECCC
T ss_pred CCCEEEEEcCC
Confidence 55 8888873
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=2.3e-13 Score=128.74 Aligned_cols=259 Identities=9% Similarity=-0.000 Sum_probs=183.4
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEE-cccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTT-LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
...+.+++++++|++.++...++.|.+||.. ++.... +..+...+.++++.+++.++++...++.|..||... . .
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~-~ 89 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG--I-I 89 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS--C-E
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC--c-E
Confidence 4578999999999988877668899999988 554332 233456789999999999888777788999998762 1 1
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I 381 (504)
....+......+.++++.+++.++++...++.|..||. ++........ .....+..++++++|.++++...++.|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP----NKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS----STTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC----CCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 11222234557899999999988888777889999998 5544332211 223468999999999988887778899
Q ss_pred EEEEcCCCceeee-eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEE
Q 010669 382 KIWDVKSQANVAK-FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459 (504)
Q Consensus 382 ~iwd~~~~~~~~~-~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~ 459 (504)
..||. +++.... +......+.+++++++|.++++...++ |.+||. +++. ..+........+.+++++++|++.++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-TEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-EEEECCCCCCCceeEEECCCCCEEEe
Confidence 99998 6654432 233445788999999998777665555 999998 6553 33433323467899999999996666
Q ss_pred EeCc--EEEEEeeccCccceeEEEc--cCCCCCCceeEEEEeecCcc
Q 010669 460 ASAD--IRVYQVASVKADWNCIKTF--PDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 460 ~~~d--i~vw~~~~~~~~~~~i~~~--~~h~~~~~v~~l~~~~~g~~ 502 (504)
...+ |.+|+. .+. +..+ ..+ ...+.++.+ ++|.+
T Consensus 242 ~~~~~~i~~~d~-----~g~-~~~~~~~~~--~~~~~~i~~-~~g~l 279 (299)
T 2z2n_A 242 EWGANKIGRLTS-----NNI-IEEYPIQIK--SAEPHGICF-DGETI 279 (299)
T ss_dssp ETTTTEEEEEET-----TTE-EEEEECSSS--SCCEEEEEE-CSSCE
T ss_pred ccCCceEEEECC-----CCc-eEEEeCCCC--CCccceEEe-cCCCE
Confidence 5343 788875 122 2222 333 567888888 87764
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=6e-16 Score=152.89 Aligned_cols=238 Identities=7% Similarity=-0.037 Sum_probs=158.5
Q ss_pred EEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeE-------------------EEEeeCCCEEEEE-----
Q 010669 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTS-------------------VKFVTEGDLFLTG----- 283 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~-------------------l~~s~~~~~l~s~----- 283 (504)
.+.|+|||++|+.++.++.|++||+.+++.......+...... +.|+|+++.++.+
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 3789999999999999999999999988766555544442222 3456666655443
Q ss_pred eCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCC------CeEEEEECCCCeEEEEeecCCCCCC
Q 010669 284 SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLD------NTWCFYDLSSGICLTQVSDAGTDGR 356 (504)
Q Consensus 284 s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~ 356 (504)
..+..|.+||+.++ ... .+..+...+..+.|+| ++..|+.++.+ ..|.+||+..+.... +... ..
T Consensus 165 ~~~~~l~~~d~~~g---~~~-~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~---~~ 236 (396)
T 3c5m_A 165 NPTCRLIKVDIETG---ELE-VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEH---AE 236 (396)
T ss_dssp CCCEEEEEEETTTC---CEE-EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCC---CT
T ss_pred CCcceEEEEECCCC---cEE-eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eecc---CC
Confidence 45678999999874 222 2335667789999999 78877776553 368889987664332 2210 11
Q ss_pred CCCeEEEEECCCCCEEEEEeCC-----CcEEEEEcCCCceeeeeeCCCCCeEEEEEcC-CCcEEEEEe------------
Q 010669 357 PEGYTSAAFHPDGLILGTGTSE-----ALVKIWDVKSQANVAKFDGHVGAVTAISFSE-NGYYLATAA------------ 418 (504)
Q Consensus 357 ~~~v~~~~~~pdg~~l~~g~~d-----g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~-~g~~l~s~~------------ 418 (504)
...+..++|+|||+.|+.++.+ +.|++||+.+++...... .. ... +.|+| +|.++++++
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC---------
T ss_pred CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccc
Confidence 2357889999999977766543 449999998876543322 11 233 89999 999888754
Q ss_pred ----CCc-EEEEEcCCCcceeeeecCCCCC---------CeeEEEECCCCCEEEEEeCc---EEEEEeeccCccce
Q 010669 419 ----HDG-VKLWDLRKLKNFRSFESSDSET---------PTNSVDFDHSGSYLAVASAD---IRVYQVASVKADWN 477 (504)
Q Consensus 419 ----~d~-v~vwd~~~~~~~~~~~~~~~~~---------~v~~i~~~~~g~~l~~~~~d---i~vw~~~~~~~~~~ 477 (504)
.+. |++||+.+++.. .+..+.... .+..+.|+|+|++|+.++.+ ..||.++.......
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred cccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 224 999999877643 333321100 25668899999998887754 67777654333333
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=3.1e-14 Score=134.29 Aligned_cols=224 Identities=13% Similarity=0.183 Sum_probs=163.7
Q ss_pred cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEec------cCCcCeEEEEE-ccCCCEEEEEeC-CCeE
Q 010669 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK------DHTAEVQAVTV-HATNKYFVTASL-DNTW 334 (504)
Q Consensus 263 ~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~h~~~v~~l~~-~p~~~~l~s~s~-dg~i 334 (504)
++-..+.+++++++++++++...++.|.+||... .....+. ++...+.++++ .++++++++... ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g----~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG----RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS----CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC----cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 4556789999999999888888899999999764 3333332 24457899999 466766666543 8899
Q ss_pred EEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeee--CCCCCeEEEEEcCCCc
Q 010669 335 CFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD--GHVGAVTAISFSENGY 412 (504)
Q Consensus 335 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~--~~~~~i~~l~~s~~g~ 412 (504)
.+|| .+++.+..+.. .+...+..++++|+|+++++...++.|.+||. .++.+..+. .+...+..++++++|.
T Consensus 103 ~~~d-~~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp EEEC-TTSCEEEEECT----TTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred EEEC-CCCcEEEEecC----ccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 9999 55666655532 23356899999999998888888899999996 455555554 3445789999999999
Q ss_pred EEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEeeccCccceeEEEccCCCCC
Q 010669 413 YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQVASVKADWNCIKTFPDLSGT 488 (504)
Q Consensus 413 ~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~~~~~~~~i~~~~~h~~~ 488 (504)
++++...++ |++||.. ++.+..+........+..++++++|+++++...+ |.+|+. .++.+..+..+...
T Consensus 177 l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-----~g~~~~~~~~~~~~ 250 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-----DGQLISALESKVKH 250 (286)
T ss_dssp EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-----TSCEEEEEEESSCC
T ss_pred EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-----CCCEEEEEcccCCC
Confidence 777776666 9999974 5555555443223578899999999988887543 777773 45666666655333
Q ss_pred CceeEEEEeecCcc
Q 010669 489 GAASFLFLFVLGQT 502 (504)
Q Consensus 489 ~~v~~l~~~~~g~~ 502 (504)
..+.++++.++|++
T Consensus 251 ~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 251 AQCFDVALMDDGSV 264 (286)
T ss_dssp SCEEEEEEETTTEE
T ss_pred CcceeEEECCCCcE
Confidence 45778999999875
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=5.2e-15 Score=143.62 Aligned_cols=229 Identities=12% Similarity=0.102 Sum_probs=156.3
Q ss_pred CCeEEEEeccCCCEEEEEeCC---C--cEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCC------------
Q 010669 224 PGIVSLDIHYSKDVIATGGVD---T--NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD------------ 286 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~d---g--~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d------------ 286 (504)
..+.++.|+|||+.|+.++.+ + .|.+|++.+++.......+ . +..+.|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 357889999999998887654 3 4888888887765544433 4 9999999999988877632
Q ss_pred ---------------CcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC-------eEEEEECCCCeE
Q 010669 287 ---------------KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN-------TWCFYDLSSGIC 344 (504)
Q Consensus 287 ---------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg-------~i~iwd~~~~~~ 344 (504)
..|.+||+.++ .....+.. . .+..+.|+|+| ++++++.++ ...+|.+.+++.
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 210 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE 210 (347)
T ss_dssp CCCC---------CEEEEEEEETTTT---EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE
T ss_pred cceeecCcccccCccceEEEEECCCC---eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce
Confidence 57889998774 33233333 3 78899999999 777776542 334444445543
Q ss_pred EEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC--------CcEEEEEcCCCceeeeeeCCCCCeEE-EEEcCCCcEEE
Q 010669 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE--------ALVKIWDVKSQANVAKFDGHVGAVTA-ISFSENGYYLA 415 (504)
Q Consensus 345 ~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d--------g~I~iwd~~~~~~~~~~~~~~~~i~~-l~~s~~g~~l~ 415 (504)
. .+.. + ..+..+ +|||+.|+.++.+ ..|.+|| +++.......+...+.. +.|+ +| +++
T Consensus 211 ~-~l~~-----~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~ 277 (347)
T 2gop_A 211 E-KMFE-----K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYF 277 (347)
T ss_dssp E-EEEE-----E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEE
T ss_pred E-Eecc-----C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEE
Confidence 3 3321 1 234433 9999988877644 4688888 55554444556677886 9999 88 888
Q ss_pred EEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEeeccCccceeEEEccCC
Q 010669 416 TAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 416 s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~~~~~~~~i~~~~~h 485 (504)
+++.++ +++| +.+++.. .+... ...+.+++|+| .++++++.+ ..||.++ ++ ...+..|
T Consensus 278 ~~~~~~~~~l~-~~~g~~~-~~~~~--~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-----g~-~~~lt~~ 339 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDGEIK-PIAKG--RHWIMGFDVDE--IVVYLKETATRLRELFTWD-----GE-EKQLTDY 339 (347)
T ss_dssp EEEETTEEEEE-EESSSEE-EEECS--SSEEEEEEESS--SEEEEEECSSSCCEEEEES-----SS-EEECCCT
T ss_pred EEecCCcEEEE-EcCCceE-EEecC--CCeEEeeeeeC--cEEEEEcCCCChHHheEeC-----Cc-EEEeccc
Confidence 888887 8898 7755443 33222 46789999999 666666655 5899984 22 4556665
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=1.1e-14 Score=140.69 Aligned_cols=227 Identities=12% Similarity=0.119 Sum_probs=166.9
Q ss_pred ccceeEEEEeeCCCEEEEEeCC------------------------CcEEEEeCCCCCCcceeEEec-cCCcCeEEEEEc
Q 010669 265 SKKVTSVKFVTEGDLFLTGSAD------------------------KTVRVWQGSEDGNYDCKHTLK-DHTAEVQAVTVH 319 (504)
Q Consensus 265 ~~~v~~l~~s~~~~~l~s~s~d------------------------g~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~~ 319 (504)
-+.+.+++++++|+++++...+ ++|.+||..++ .....+. ++-.....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCceEEEEC
Confidence 3568999999999988887777 47999998765 3344333 344578999999
Q ss_pred cCCCEEEEEeCCCeEEEEECCCCe-EEEEeecCCC----CCCCCCeEEEEECC-CCCEEEEEe-CCCcEEEEEcCCCcee
Q 010669 320 ATNKYFVTASLDNTWCFYDLSSGI-CLTQVSDAGT----DGRPEGYTSAAFHP-DGLILGTGT-SEALVKIWDVKSQANV 392 (504)
Q Consensus 320 p~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~----~~~~~~v~~~~~~p-dg~~l~~g~-~dg~I~iwd~~~~~~~ 392 (504)
|+|+++++.+.++.|++||..... .+..+..... ..+......++++| +|.++++.+ .++.|++|| .+++.+
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 999988888889999999986542 3444421100 13344688999999 888888886 699999999 567776
Q ss_pred eeeeC----------CCCCeEEEEEcCC-CcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEE
Q 010669 393 AKFDG----------HVGAVTAISFSEN-GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA 460 (504)
Q Consensus 393 ~~~~~----------~~~~i~~l~~s~~-g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~ 460 (504)
..+.. +-.....|+|+|+ |.++++...++ |++||..+++.+..+........+..++|+| +..+++.
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~ 257 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVN 257 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeC
Confidence 66642 2234899999998 66666666666 9999999888888886555566788999999 4333333
Q ss_pred e-------Cc--EEEEEeeccCccceeEEEcc---CCCCCCceeEEEEeecCcc
Q 010669 461 S-------AD--IRVYQVASVKADWNCIKTFP---DLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 461 ~-------~d--i~vw~~~~~~~~~~~i~~~~---~h~~~~~v~~l~~~~~g~~ 502 (504)
+ .+ +++|++ .+++.+..+. ++ ...+.+|++.++|.+
T Consensus 258 g~~~v~~~~~~~v~~~~~----~~g~~~~~~~~~~~~--~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNF----SSGEIIDVFKPVRKH--FDMPHDIVASEDGTV 305 (329)
T ss_dssp CCCCTTCSCCCCEEEEET----TTCCEEEEECCSSSC--CSSEEEEEECTTSEE
T ss_pred CCEEeccCCCcEEEEEEc----CCCeEEEEEcCCCCc--cCCeeEEEECCCCCE
Confidence 2 12 888887 5677787773 44 567899999999854
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=4.3e-14 Score=136.28 Aligned_cols=241 Identities=9% Similarity=-0.023 Sum_probs=170.5
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
....+.+. +++++++...++.|.+||..+++.+.++. .......+++++++.++++...++.|.+||..+. ....
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~---~~~~ 119 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY---EITG 119 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT---EEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC---eEEE
Confidence 35667764 45566666678999999999999988885 3466899999999855555448999999999875 4444
Q ss_pred EeccCC-----cCeEEEEEccCCCEEEEEe--CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 305 TLKDHT-----AEVQAVTVHATNKYFVTAS--LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 305 ~~~~h~-----~~v~~l~~~p~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.+.... .....+++ ++..+++++ .++.|.+||+.+++....+... .....++++|+|++++++..
T Consensus 120 ~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g------~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG------IQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS------SCBCCCEECTTSEEEEEBCC
T ss_pred EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC------CCccceEEcCCCCEEEEECC
Confidence 443222 14556777 344555554 4889999999999888777531 23567899999998877765
Q ss_pred C----------CcEEEEEcCCCceeeeeeCC-CCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCCCCCCee
Q 010669 378 E----------ALVKIWDVKSQANVAKFDGH-VGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTN 446 (504)
Q Consensus 378 d----------g~I~iwd~~~~~~~~~~~~~-~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~~~~v~ 446 (504)
+ +.|.+||..+++....+... ......++|+|++.+|+++.. .|.+||..+++...............
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~ 270 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYY 270 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEE
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceE
Confidence 4 78999999988877666532 236899999999999888765 79999998877532111111135688
Q ss_pred EEEECCCCCEEEEEe-----Cc--EEEEEeeccCccceeEEEccC
Q 010669 447 SVDFDHSGSYLAVAS-----AD--IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 447 ~i~~~~~g~~l~~~~-----~d--i~vw~~~~~~~~~~~i~~~~~ 484 (504)
.++++|++..|+++. .+ |.+|+. . ++.+.++..
T Consensus 271 gi~vdp~~g~lyva~~~~y~~~~~V~v~d~----~-g~~~~~i~~ 310 (328)
T 3dsm_A 271 GLTVNPNNGEVYVADAIDYQQQGIVYRYSP----Q-GKLIDEFYV 310 (328)
T ss_dssp EEEECTTTCCEEEEECTTSSSEEEEEEECT----T-CCEEEEEEE
T ss_pred EEEEcCCCCeEEEEcccccccCCEEEEECC----C-CCEEEEEEe
Confidence 999999555444444 33 777875 3 666766653
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=1.1e-14 Score=141.36 Aligned_cols=236 Identities=10% Similarity=0.088 Sum_probs=157.4
Q ss_pred CeEEEEeccCCCEEEEEe---------CCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCC---C--cEE
Q 010669 225 GIVSLDIHYSKDVIATGG---------VDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD---K--TVR 290 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d---g--~i~ 290 (504)
.+....+ ||+.++... .++.|.+||+.+++... + ..+..+.|+|||++|+.++.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4667777 888776542 25679999998876543 3 568899999999988877653 3 377
Q ss_pred EEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC---------------------------CeEEEEECCCCe
Q 010669 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD---------------------------NTWCFYDLSSGI 343 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d---------------------------g~i~iwd~~~~~ 343 (504)
+|++.++ .... +..+.. +..+.|+|+|+.|+.++.+ ..|.+||+.+++
T Consensus 89 ~~~~~~g---~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 89 VADLETL---SSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEETTTT---EEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred EEECCCC---ceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 7787764 3322 222334 9999999999988888642 579999999987
Q ss_pred EEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCC-------cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEE
Q 010669 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA-------LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416 (504)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg-------~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s 416 (504)
....+.. . .+..++|+||| +++++..++ ...||.+.+++ ...+..+ ..+..+ +|+|++|+.
T Consensus 164 ~~~~l~~------~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~ 231 (347)
T 2gop_A 164 VIEEFEK------P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILL 231 (347)
T ss_dssp EEEEEEE------E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEE
T ss_pred EEeeecC------C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEE
Confidence 6444431 2 57889999999 777776542 33444444444 3344334 455554 999998877
Q ss_pred EeCC--------c-EEEEEcCCCcceeeeecCCCCCCeeE-EEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccC
Q 010669 417 AAHD--------G-VKLWDLRKLKNFRSFESSDSETPTNS-VDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 417 ~~~d--------~-v~vwd~~~~~~~~~~~~~~~~~~v~~-i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~ 484 (504)
++.+ . |.+|| +++....... +...+.. +.|+ +| ++++++.+ ++|| +. .++....+ .
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~--~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~----~g~~~~~~-~ 299 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GKEVMGILDE--VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW----DGEIKPIA-K 299 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SSCEEESSTT--CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE----SSSEEEEE-C
T ss_pred EEccccCCccccceEEEEC--CCceEecccc--CCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec----CCceEEEe-c
Confidence 6632 3 88888 4443322222 2456775 8999 88 77777776 9999 85 23333333 3
Q ss_pred CCCCCceeEEEEee
Q 010669 485 LSGTGAASFLFLFV 498 (504)
Q Consensus 485 h~~~~~v~~l~~~~ 498 (504)
+ .+.|.++++++
T Consensus 300 ~--~~~v~~~~~s~ 311 (347)
T 2gop_A 300 G--RHWIMGFDVDE 311 (347)
T ss_dssp S--SSEEEEEEESS
T ss_pred C--CCeEEeeeeeC
Confidence 3 56788888776
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=8e-15 Score=143.37 Aligned_cols=219 Identities=16% Similarity=0.174 Sum_probs=151.6
Q ss_pred EEEeccCCCEEEEEe----------CCCcEEEEcCCCCceEEEcccC------ccceeEEEEeeCCCEEEEEeC--CCcE
Q 010669 228 SLDIHYSKDVIATGG----------VDTNAVLFDRPSGQIVTTLSGH------SKKVTSVKFVTEGDLFLTGSA--DKTV 289 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h------~~~v~~l~~s~~~~~l~s~s~--dg~i 289 (504)
.++|+|||++++++. .++.|.+||..+++.+..+... ......++|+|+|++|++++. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998876 3677999999998888877532 245678999999999998874 6899
Q ss_pred EEEeCCCCCCcceeEE-eccCCcCeEEEEEccCC-CEEEEEeCCCeEEEEECCC-CeEE---------------------
Q 010669 290 RVWQGSEDGNYDCKHT-LKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSS-GICL--------------------- 345 (504)
Q Consensus 290 ~iwd~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~-~~l~s~s~dg~i~iwd~~~-~~~~--------------------- 345 (504)
.+||+.+. +.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|++.. ++..
T Consensus 134 ~v~d~~~~---~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (361)
T 2oiz_A 134 GIVDVAKG---DYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPA 208 (361)
T ss_dssp EEEETTTT---EEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCE
T ss_pred EEEECCCC---cEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEec
Confidence 99999875 44444 321 1 12223344443 3445555555555555433 2211
Q ss_pred ----------------------------EEeecCC-----CCCCCCCeEEEEECCCCCEEEEEeC-----------CCcE
Q 010669 346 ----------------------------TQVSDAG-----TDGRPEGYTSAAFHPDGLILGTGTS-----------EALV 381 (504)
Q Consensus 346 ----------------------------~~~~~~~-----~~~~~~~v~~~~~~pdg~~l~~g~~-----------dg~I 381 (504)
..+.... ..........++|+|+++.++++.. .+.|
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceE
Confidence 0000000 0000011112789999887776543 3489
Q ss_pred EEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCC--cceeeeecCCCCCCeeEEEECCCCC
Q 010669 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKL--KNFRSFESSDSETPTNSVDFDHSGS 455 (504)
Q Consensus 382 ~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~--~~~~~~~~~~~~~~v~~i~~~~~g~ 455 (504)
.+||+.+++.+.++..+. +.+++|+|+|++|++++.+.|.+||..++ +.+..+... ......++++|+|.
T Consensus 289 ~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~--G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 289 WVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGA--AEASLQVQFHPVGG 360 (361)
T ss_dssp EEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTS--CSSEEEEEECCCSC
T ss_pred EEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccC--CCCcEEEEecCCCC
Confidence 999999999999998776 99999999999999988733999999999 888776433 45778999999985
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=3e-14 Score=135.15 Aligned_cols=227 Identities=11% Similarity=0.074 Sum_probs=162.1
Q ss_pred ceEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeE
Q 010669 256 QIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTW 334 (504)
Q Consensus 256 ~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i 334 (504)
..+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 33444555566788999999998 7888888999999998763 34455567789999999999988877778899
Q ss_pred EEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE----Ee-------------CCCcEEEEEcCCCceeeeeeC
Q 010669 335 CFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT----GT-------------SEALVKIWDVKSQANVAKFDG 397 (504)
Q Consensus 335 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~----g~-------------~dg~I~iwd~~~~~~~~~~~~ 397 (504)
.+||..+++........ .......+..++++|+|+++++ |+ ..+.|..||.. ++ +..+..
T Consensus 93 ~~~d~~~g~~~~~~~~~-~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~ 169 (296)
T 3e5z_A 93 ERQREPGGEWESIADSF-EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIR 169 (296)
T ss_dssp EEECSTTCCEEEEECEE-TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEEC
T ss_pred EEEcCCCCcEEEEeecc-CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeec
Confidence 99999888754433211 1011234678999999998887 33 13456666654 43 344455
Q ss_pred CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcC-CCcc---eeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEeec
Q 010669 398 HVGAVTAISFSENGYYLATAAHDG-VKLWDLR-KLKN---FRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVAS 471 (504)
Q Consensus 398 ~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~-~~~~---~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~ 471 (504)
+......++|+|+|+.|++.+.++ |.+||+. ++.. ...+ ......+..++++++|+++++. .. |.+|+.
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~-- 244 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA-GDGVHVLTP-- 244 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE-TTEEEEECT--
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc-CCeEEEECC--
Confidence 666789999999999886666666 9999997 4443 2333 2224567789999999977776 44 888885
Q ss_pred cCccceeEEEccCCCCCCceeEEEEe-ecCc
Q 010669 472 VKADWNCIKTFPDLSGTGAASFLFLF-VLGQ 501 (504)
Q Consensus 472 ~~~~~~~i~~~~~h~~~~~v~~l~~~-~~g~ 501 (504)
.++.+..+..+ .. +++++|. ++|+
T Consensus 245 ---~g~~~~~~~~~--~~-~~~~~f~~~d~~ 269 (296)
T 3e5z_A 245 ---DGDELGRVLTP--QT-TSNLCFGGPEGR 269 (296)
T ss_dssp ---TSCEEEEEECS--SC-CCEEEEESTTSC
T ss_pred ---CCCEEEEEECC--CC-ceeEEEECCCCC
Confidence 36777888776 45 8999984 6765
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=1.8e-13 Score=141.00 Aligned_cols=262 Identities=14% Similarity=0.120 Sum_probs=184.1
Q ss_pred ccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCC--CCCCcceeEEeccC
Q 010669 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS--EDGNYDCKHTLKDH 309 (504)
Q Consensus 232 s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~~~~h 309 (504)
++.+.++++...++.|.++|..+++.+.++... ..+..+.|+|||+++++++.|+.|.+||+. +. +.+..+...
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~---~~v~~i~~G 239 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP---TTVAEIKIG 239 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC---CEEEEEECC
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCC---cEeEEEecC
Confidence 344557778888999999999999999888743 357799999999999999999999999995 43 455555543
Q ss_pred CcCeEEEEEc----cCCCEEEEEeC-CCeEEEEECCCCeEEEEeecCCC--CC---C-CCCeEEEEECCCCCEE-EEEeC
Q 010669 310 TAEVQAVTVH----ATNKYFVTASL-DNTWCFYDLSSGICLTQVSDAGT--DG---R-PEGYTSAAFHPDGLIL-GTGTS 377 (504)
Q Consensus 310 ~~~v~~l~~~----p~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~--~~---~-~~~v~~~~~~pdg~~l-~~g~~ 377 (504)
.....++|+ |+|+++++++. ++.|.++|..+.+.+..+...+. .+ | ...+..+..++++..+ +....
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred -CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 346789999 69998887765 58999999999998887753211 00 1 1257788889876554 44456
Q ss_pred CCcEEEEEcCCCceee--eeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeec-CCCCCCeeEEE-EC
Q 010669 378 EALVKIWDVKSQANVA--KFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFES-SDSETPTNSVD-FD 451 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~--~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~-~~~~~~v~~i~-~~ 451 (504)
+|.|.++|....+.+. .+. ......++.|+|+|++++++... + |.++|+.+++.+..+.. .....+-..+. ++
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~ 397 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH 397 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE
T ss_pred CCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeEC
Confidence 7999999997754322 222 33457789999999998887754 3 99999999988777765 22111111222 58
Q ss_pred CCCCE-EEEEe--Cc-EEEEEeeccC---ccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 452 HSGSY-LAVAS--AD-IRVYQVASVK---ADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 452 ~~g~~-l~~~~--~d-i~vw~~~~~~---~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
|++.. .+++. .+ |.+++....+ ..|+.++++... ...-..+.+.|+|+
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~ 452 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQ 452 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCS
T ss_pred CCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC--CCCCEEEEeCCCCC
Confidence 87544 44442 23 9999985422 128999988764 22334456677765
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=5.8e-14 Score=150.05 Aligned_cols=257 Identities=10% Similarity=0.015 Sum_probs=169.6
Q ss_pred cCCCEEEEEeCC-----CcEEEEcCCCCceEEEc------ccCccceeEEEEeeCCCEEEEEeCCC-----cEEEEeCCC
Q 010669 233 YSKDVIATGGVD-----TNAVLFDRPSGQIVTTL------SGHSKKVTSVKFVTEGDLFLTGSADK-----TVRVWQGSE 296 (504)
Q Consensus 233 ~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~------~~h~~~v~~l~~s~~~~~l~s~s~dg-----~i~iwd~~~ 296 (504)
|+|++++....+ +.+.+.+...++....+ .+|...+..++|||||++|+.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 667765544322 23455554444432222 13445688999999999988765433 899999988
Q ss_pred CCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCe----------------EEEEECCCCeEE--EEeecCCCCCCCC
Q 010669 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT----------------WCFYDLSSGICL--TQVSDAGTDGRPE 358 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~----------------i~iwd~~~~~~~--~~~~~~~~~~~~~ 358 (504)
+ ........+ ..+..++|+|||+.|+.++.++. |++|++.++... ..+. ...+..
T Consensus 161 g---~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~---~~~~~~ 233 (710)
T 2xdw_A 161 A---KELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE---FPDEPK 233 (710)
T ss_dssp T---EEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC---CTTCTT
T ss_pred C---CCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec---cCCCCe
Confidence 5 332221122 23678999999999999988766 999999887632 2222 113345
Q ss_pred CeEEEEECCCCCEEEEEeC-----CCcEEEEEcCC------Cc-eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC----c-
Q 010669 359 GYTSAAFHPDGLILGTGTS-----EALVKIWDVKS------QA-NVAKFDGHVGAVTAISFSENGYYLATAAHD----G- 421 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~-----dg~I~iwd~~~------~~-~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d----~- 421 (504)
.+..+.|+|||++|+.++. +..|++||+.+ +. ....+..+...+.. .|+++|..|+..+.. .
T Consensus 234 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~ 312 (710)
T 2xdw_A 234 WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR 312 (710)
T ss_dssp CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE
T ss_pred EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE
Confidence 6789999999999888764 56899999976 43 45566666666655 488888877666542 3
Q ss_pred EEEEEcCCCc--ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEe
Q 010669 422 VKLWDLRKLK--NFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLF 497 (504)
Q Consensus 422 v~vwd~~~~~--~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~ 497 (504)
|.+||+.++. ....+..+.....+..+.|++++.++++...+ .+||.++. .+++.+..+..+ .+.+.++.++
T Consensus 313 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~--~~g~~~~~l~~~--~~~v~~~~~s 388 (710)
T 2xdw_A 313 LINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL--ATGALLKIFPLE--VGSVVGYSGQ 388 (710)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET--TTCCEEEEECCC--SSEEEEEECC
T ss_pred EEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC--CCCCEEEecCCC--CceEEEEecC
Confidence 9999998764 23444443222367889999777777777766 44554422 345566777766 6678888888
Q ss_pred ecCc
Q 010669 498 VLGQ 501 (504)
Q Consensus 498 ~~g~ 501 (504)
++|.
T Consensus 389 ~d~~ 392 (710)
T 2xdw_A 389 KKDT 392 (710)
T ss_dssp TTCS
T ss_pred CCCC
Confidence 7764
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=2e-14 Score=153.27 Aligned_cols=239 Identities=10% Similarity=-0.008 Sum_probs=159.9
Q ss_pred cCCCCCeEEEEeccCCCEEE-----EEeCCCcEEEEcCCCCceEEEcccCccce--eEEEEeeCCCEEEEEeCCCc----
Q 010669 220 KTSKPGIVSLDIHYSKDVIA-----TGGVDTNAVLFDRPSGQIVTTLSGHSKKV--TSVKFVTEGDLFLTGSADKT---- 288 (504)
Q Consensus 220 ~~~~~~I~~~~~s~~~~~l~-----sg~~dg~i~vwd~~~~~~~~~~~~h~~~v--~~l~~s~~~~~l~s~s~dg~---- 288 (504)
.+|...+.+++|||||++|+ .|+.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 34555789999999999988 44445789999999987641 1122223 68999999999999988776
Q ss_pred ---------EEEEeCCCCCCc-ceeEEeccCCcCeEEEEEccCCCEEEEEeCCC----eEEEEECCCCeEEEEeecCCCC
Q 010669 289 ---------VRVWQGSEDGNY-DCKHTLKDHTAEVQAVTVHATNKYFVTASLDN----TWCFYDLSSGICLTQVSDAGTD 354 (504)
Q Consensus 289 ---------i~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~ 354 (504)
|++|++.++... ..+.....|...+.++.|+|+|++|+.++.++ .|.+||..++.......
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~----- 269 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK----- 269 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE-----
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec-----
Confidence 999999875321 23333344556789999999999998887666 67777766554333322
Q ss_pred CCCCCeEEEEECCCCCEEEEEe---CCCcEEEEEcCCCce--eeeeeCC--CCCeEEEEEcCCCcEEEEEeCCc-EEEEE
Q 010669 355 GRPEGYTSAAFHPDGLILGTGT---SEALVKIWDVKSQAN--VAKFDGH--VGAVTAISFSENGYYLATAAHDG-VKLWD 426 (504)
Q Consensus 355 ~~~~~v~~~~~~pdg~~l~~g~---~dg~I~iwd~~~~~~--~~~~~~~--~~~i~~l~~s~~g~~l~s~~~d~-v~vwd 426 (504)
+...+....+ ++|.+++... .++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...++ .++|.
T Consensus 270 -~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 270 -GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp -CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred -CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 1233455556 5666444443 258899999987653 2333333 4468889998 777888888886 55554
Q ss_pred cC-CCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc------EEEEEe
Q 010669 427 LR-KLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD------IRVYQV 469 (504)
Q Consensus 427 ~~-~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d------i~vw~~ 469 (504)
+. +++....+..+. ...+..+.++|++..++....+ +.+|++
T Consensus 347 ~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 347 ATLKGKPVRTVQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EETTCCEEEECCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EeCCCCeeEEecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 43 344445554332 3567788899999876644322 666665
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=4.5e-13 Score=127.85 Aligned_cols=232 Identities=12% Similarity=0.128 Sum_probs=162.1
Q ss_pred CCeEEEEeccCCCEEEE-------EeCCCcEEEEcCCCCceEEEcc----cCccceeEEEEeeC-CCEEEEEeCCCcEEE
Q 010669 224 PGIVSLDIHYSKDVIAT-------GGVDTNAVLFDRPSGQIVTTLS----GHSKKVTSVKFVTE-GDLFLTGSADKTVRV 291 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~s-------g~~dg~i~vwd~~~~~~~~~~~----~h~~~v~~l~~s~~-~~~l~s~s~dg~i~i 291 (504)
....+++|+++|.++++ +..++.|.+||..+++...... ++...+.+++++++ ++++++. ..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 34678999999998888 6778899999988777543222 24567899999998 6655544 4447889
Q ss_pred EeCCCCCCcceeEE-ec----cCCcCeEEEEEccCCCEEEEEeCC---------------CeEEEEECCCCeEEEEeecC
Q 010669 292 WQGSEDGNYDCKHT-LK----DHTAEVQAVTVHATNKYFVTASLD---------------NTWCFYDLSSGICLTQVSDA 351 (504)
Q Consensus 292 wd~~~~~~~~~~~~-~~----~h~~~v~~l~~~p~~~~l~s~s~d---------------g~i~iwd~~~~~~~~~~~~~ 351 (504)
||.. + ..... .. .....+.+++++++|+++++...+ +.|..||.. ++......
T Consensus 97 ~d~~-g---~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-- 169 (314)
T 1pjx_A 97 VQTD-G---TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-- 169 (314)
T ss_dssp EETT-S---CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--
T ss_pred EeCC-C---CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--
Confidence 9987 3 22221 11 112458899999999888777655 577888776 54433222
Q ss_pred CCCCCCCCeEEEEEC----CCCCEEEEE-eCCCcEEEEEcC-CCc-----eeeeeeCCC-CCeEEEEEcCCCcEEEEEeC
Q 010669 352 GTDGRPEGYTSAAFH----PDGLILGTG-TSEALVKIWDVK-SQA-----NVAKFDGHV-GAVTAISFSENGYYLATAAH 419 (504)
Q Consensus 352 ~~~~~~~~v~~~~~~----pdg~~l~~g-~~dg~I~iwd~~-~~~-----~~~~~~~~~-~~i~~l~~s~~g~~l~s~~~ 419 (504)
+......++|+ |+|+.++++ ..++.|.+||+. .++ ....+..+. ..+..++++++|.++++...
T Consensus 170 ----~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 170 ----AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp ----EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred ----CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 11346789999 999755544 567899999986 343 223333343 56889999999998887766
Q ss_pred Cc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEe
Q 010669 420 DG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQV 469 (504)
Q Consensus 420 d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~ 469 (504)
++ |.+||..+++.+..+..+ ...+.+++|+++|++|++++.+ |..|++
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCP--FEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECS--SSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCCcEeEEEeCC--CCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 65 999999877776666554 3678999999999966666543 666665
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=3.5e-13 Score=129.89 Aligned_cols=243 Identities=8% Similarity=-0.052 Sum_probs=169.2
Q ss_pred CCCcEEEEcCCCCceEEEcc------cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEE
Q 010669 243 VDTNAVLFDRPSGQIVTTLS------GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV 316 (504)
Q Consensus 243 ~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l 316 (504)
.++.|.+||..+++....+. ........+.+. ++.++++...++.|.+||..+. +.+.++. .......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~---~~~~~i~-~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF---KEVGRIT-GFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC---CEEEEEE-CCSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc---EEEEEcC-CCCCCcEE
Confidence 47899999999988766542 122345677774 4555666667899999999876 5555554 34668899
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCceeeee
Q 010669 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKSQANVAKF 395 (504)
Q Consensus 317 ~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~~~~~~~~~~ 395 (504)
++++++..+++...++.|.+||..+++....+......+.......+++ .++.++++.. .++.|.+||+.+++.+..+
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 9998885555544899999999999988776653211111124556677 4444444443 4889999999999888777
Q ss_pred eCCCCCeEEEEEcCCCcEEEEEeCC----------c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCcE
Q 010669 396 DGHVGAVTAISFSENGYYLATAAHD----------G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADI 464 (504)
Q Consensus 396 ~~~~~~i~~l~~s~~g~~l~s~~~d----------~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~di 464 (504)
... .....+.++++|++++++..+ + |.+||..+++....+.... ......++|+|++++|+++...+
T Consensus 169 ~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~~v 246 (328)
T 3dsm_A 169 TIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINNDI 246 (328)
T ss_dssp ECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESSSE
T ss_pred EcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEccEE
Confidence 643 346789999999987777654 5 9999999988777776532 23689999999999999887668
Q ss_pred EEEEeeccCccceeEE--EccCCCCCCceeEEEEeec
Q 010669 465 RVYQVASVKADWNCIK--TFPDLSGTGAASFLFLFVL 499 (504)
Q Consensus 465 ~vw~~~~~~~~~~~i~--~~~~h~~~~~v~~l~~~~~ 499 (504)
.+||.. +++... .+..+ .....++++.|+
T Consensus 247 ~~~d~~----t~~~~~~~~~~~~--~~~p~gi~vdp~ 277 (328)
T 3dsm_A 247 WRMPVE----ADRVPVRPFLEFR--DTKYYGLTVNPN 277 (328)
T ss_dssp EEEETT----CSSCCSSCSBCCC--SSCEEEEEECTT
T ss_pred EEEECC----CCceeeeeeecCC--CCceEEEEEcCC
Confidence 788873 233221 11211 346778888873
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=1.7e-12 Score=133.71 Aligned_cols=266 Identities=15% Similarity=0.114 Sum_probs=183.0
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCC--CCceEEEcccCccceeEEEEe----eCCCEEEEEe-CCCcEEEEeCCCC
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRP--SGQIVTTLSGHSKKVTSVKFV----TEGDLFLTGS-ADKTVRVWQGSED 297 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~l~~s----~~~~~l~s~s-~dg~i~iwd~~~~ 297 (504)
.+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....++|+ |+|+++++++ .+++|.|+|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 56789999999999999999999999995 788888877543 36799999 6999877766 4589999998775
Q ss_pred CCcceeEEecc----------CCc-CeEEEEEccCCCE-EEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEE
Q 010669 298 GNYDCKHTLKD----------HTA-EVQAVTVHATNKY-FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365 (504)
Q Consensus 298 ~~~~~~~~~~~----------h~~-~v~~l~~~p~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 365 (504)
+.+..+.. |.. .+..+..++++.. ++....+|.|.++|............ ........+.|
T Consensus 277 ---~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i----~~~~~~~d~~~ 349 (567)
T 1qks_A 277 ---EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI----SAERFLHDGGL 349 (567)
T ss_dssp ---CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE----ECCSSEEEEEE
T ss_pred ---cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee----eccccccCceE
Confidence 44444331 212 6788888887664 44556679999999987643332221 11235778999
Q ss_pred CCCCCEEEEEe-CCCcEEEEEcCCCceeeeeeC-----CCCCeEEEEEcCC-CcEEEEEeC-Cc-EEEEEcCC-------
Q 010669 366 HPDGLILGTGT-SEALVKIWDVKSQANVAKFDG-----HVGAVTAISFSEN-GYYLATAAH-DG-VKLWDLRK------- 429 (504)
Q Consensus 366 ~pdg~~l~~g~-~dg~I~iwd~~~~~~~~~~~~-----~~~~i~~l~~s~~-g~~l~s~~~-d~-v~vwd~~~------- 429 (504)
+|+|++|+++. .++.|.++|+.+++.+..+.. |.+.-..+ ++|+ |..++++.. ++ |.++|...
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~ 428 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNA 428 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcccc
Confidence 99999887765 578999999999987766543 33222222 5787 444455533 34 99999987
Q ss_pred CcceeeeecCCCCCCeeEEEECCCCCEEEEEe--------Cc-EEEEEeecc-----CccceeEEE--ccCC-CCCCcee
Q 010669 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVAS--------AD-IRVYQVASV-----KADWNCIKT--FPDL-SGTGAAS 492 (504)
Q Consensus 430 ~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~--------~d-i~vw~~~~~-----~~~~~~i~~--~~~h-~~~~~v~ 492 (504)
.+.++++... ...-..+.++|++++|.+.. .+ |.|||+... .+.++.+.. +.+. .+...+.
T Consensus 429 ~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 429 WKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp TSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred CEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 5667777654 23335578899999999866 23 999998543 111122211 1111 0134788
Q ss_pred EEEEeecCc
Q 010669 493 FLFLFVLGQ 501 (504)
Q Consensus 493 ~l~~~~~g~ 501 (504)
.+.|.++|.
T Consensus 507 ~~~~~~~G~ 515 (567)
T 1qks_A 507 QGEFNKDGT 515 (567)
T ss_dssp EEEECTTSS
T ss_pred eeeECCCCC
Confidence 889998885
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=7.7e-12 Score=118.19 Aligned_cols=262 Identities=9% Similarity=0.017 Sum_probs=181.1
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEE-EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT-TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
...+.+++++++|++.++...++.|.+||.. ++... .+..+...+.++++.+++.++++...++.|..||.. +. .
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~--~ 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG--F 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC--E
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC--e
Confidence 4578899999999988887778999999987 55443 223334678999999999887777778889999977 32 1
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I 381 (504)
....+......+.++++.++++++++...++.|..||.. ++...... . .....+..++++++|+++++...++.|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-~---~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL-P---NKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC-S---STTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC-C---CCCCCceeEEECCCCCEEEEecCCCeE
Confidence 222222234678999999999988887778899999988 55442221 1 223468999999999977777668899
Q ss_pred EEEEcCCCceeee-eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEE
Q 010669 382 KIWDVKSQANVAK-FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459 (504)
Q Consensus 382 ~iwd~~~~~~~~~-~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~ 459 (504)
..||. +++.... ...+...+..++++++|.++++...++ |.+||. ++.... +........+.+++++++|++.++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~ 246 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTPNARPHAITAGKNSEIWFT 246 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCCCCCceEEEECCCCCEEEe
Confidence 99998 5554332 223445789999999998777766565 999998 444322 322222456889999999986666
Q ss_pred EeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 460 ASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 460 ~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
...+ |..|+. ..... ...+... ...+.++.+.++|.+
T Consensus 247 ~~~~~~i~~~~~---~g~~~-~~~~~~~--~~~~~~i~~~~~g~l 285 (300)
T 2qc5_A 247 EWGANQIGRITN---DNTIQ-EYQLQTE--NAEPHGITFGKDGSV 285 (300)
T ss_dssp ETTTTEEEEECT---TSCEE-EEECCST--TCCCCCEEECTTSCE
T ss_pred ccCCCeEEEECC---CCcEE-EEECCcc--CCccceeEeCCCCCE
Confidence 5443 777764 11111 1122322 456788888888764
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=7.2e-12 Score=118.31 Aligned_cols=234 Identities=12% Similarity=0.027 Sum_probs=167.6
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceE-EEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIV-TTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
...+.+++++++|.++++...++.|..|+.. ++.. ..+......+.++++.+++.++++...++.|.+||. ++. .
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~--~ 131 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK--I 131 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC--E
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC--E
Confidence 4578999999999988887778899999976 4432 222234557899999999988887777889999998 321 1
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I 381 (504)
.......+...+.++++.++++.+++...++.|..||. +++....... .....+..++++++|.++++...++.|
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i 206 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIP----TPASGPVGITKGNDDALWFVEIIGNKI 206 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS----STTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCC----CCCCcceeEEECCCCCEEEEccCCceE
Confidence 11222334467899999999988887777889999999 6654432111 223468899999999988777778899
Q ss_pred EEEEcCCCceeee-eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEE
Q 010669 382 KIWDVKSQANVAK-FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459 (504)
Q Consensus 382 ~iwd~~~~~~~~~-~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~ 459 (504)
.+||. +++.... ...+...+.+++++++|.++++...++ |..||. ++. +..+........+.++++ ++|.+.++
T Consensus 207 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~ 282 (299)
T 2z2n_A 207 GRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFA 282 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEE
T ss_pred EEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEE
Confidence 99999 6654322 233456789999999998766664554 999998 343 344433333457899999 88888777
Q ss_pred EeCc-EEEEEe
Q 010669 460 ASAD-IRVYQV 469 (504)
Q Consensus 460 ~~~d-i~vw~~ 469 (504)
.+.+ +..++.
T Consensus 283 ~~~~~l~~~~~ 293 (299)
T 2z2n_A 283 MECDKIGKLTL 293 (299)
T ss_dssp ETTTEEEEEEE
T ss_pred ecCCcEEEEEc
Confidence 6555 777775
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=1.5e-13 Score=146.43 Aligned_cols=254 Identities=15% Similarity=0.027 Sum_probs=162.0
Q ss_pred cCCCEEEEEeCCC-----cEEEEcCCCCceEEEcc------cCccceeEEEEeeCCCEEE-----EEeCCCcEEEEeCCC
Q 010669 233 YSKDVIATGGVDT-----NAVLFDRPSGQIVTTLS------GHSKKVTSVKFVTEGDLFL-----TGSADKTVRVWQGSE 296 (504)
Q Consensus 233 ~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~------~h~~~v~~l~~s~~~~~l~-----s~s~dg~i~iwd~~~ 296 (504)
|+|++++....++ .+.+.+...++....+. +|...+..++|||||++|+ .|+.+.+|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6777766655433 24444444444322222 4556789999999999888 344457899999988
Q ss_pred CCCcceeEEeccCCcCe--EEEEEccCCCEEEEEeCCCe-------------EEEEECCCCeE--EEEeecCCCCCCCCC
Q 010669 297 DGNYDCKHTLKDHTAEV--QAVTVHATNKYFVTASLDNT-------------WCFYDLSSGIC--LTQVSDAGTDGRPEG 359 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v--~~l~~~p~~~~l~s~s~dg~-------------i~iwd~~~~~~--~~~~~~~~~~~~~~~ 359 (504)
+. ... ..+...+ ..++|+|||+.|+.++.|.. |++|++.++.. ...+. ...+...
T Consensus 157 g~---~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~---~~~~~~~ 228 (695)
T 2bkl_A 157 GE---WSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE---RTGDPTT 228 (695)
T ss_dssp CC---BCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC---CCCCTTC
T ss_pred CC---CcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe---cCCCCEE
Confidence 63 210 1111222 67899999999999998776 99999998762 22222 1134457
Q ss_pred eEEEEECCCCCEEEEEeCCC----cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeC---Cc-EEEEEcCCCc
Q 010669 360 YTSAAFHPDGLILGTGTSEA----LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAH---DG-VKLWDLRKLK 431 (504)
Q Consensus 360 v~~~~~~pdg~~l~~g~~dg----~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~---d~-v~vwd~~~~~ 431 (504)
+..+.|+|||++|+.++.++ .|++||..++. ...+..+...+....| ++|.+++.+.. ++ |.+||+.++.
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 88999999999988877666 67777765554 3444445556666667 56664444442 34 9999998765
Q ss_pred c--eeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 432 N--FRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 432 ~--~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
. ...+..+.....+..++|+ ++.++++...+ .+||.++. .+..+..+..+ +.+.+..+.++++|.
T Consensus 307 ~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~---~g~~~~~l~~~-~~~~v~~~~~s~d~~ 375 (695)
T 2bkl_A 307 RASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL---KGKPVRTVQLP-GVGAASNLMGLEDLD 375 (695)
T ss_dssp GGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET---TCCEEEECCCS-SSSEECCCBSCTTCS
T ss_pred ccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC---CCCeeEEecCC-CCeEEEEeecCCCCC
Confidence 3 2334333224467888888 66677777766 77887742 24445555433 245566666666664
No 198
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.58 E-value=1.3e-15 Score=114.04 Aligned_cols=52 Identities=23% Similarity=0.399 Sum_probs=49.7
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
|.|+||+++|++||+++ |||+|||.+|++|+..+++||+|+++|+.++|++-
T Consensus 15 ~~CpI~~~~m~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~pn 66 (85)
T 2kr4_A 15 FRDPLMDTLMTDPVRLP-SGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPV 66 (85)
T ss_dssp TBCTTTCSBCSSEEECT-TSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCEEC
T ss_pred eECcccCchhcCCeECC-CCCEECHHHHHHHHhcCCCCCCCcCCCChHhcchH
Confidence 57999999999999997 99999999999999999999999999999999876
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=5.6e-13 Score=143.10 Aligned_cols=237 Identities=9% Similarity=0.038 Sum_probs=155.1
Q ss_pred CCCeEEEEeccCCCEEEEEeCC-----CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCc---------
Q 010669 223 KPGIVSLDIHYSKDVIATGGVD-----TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT--------- 288 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~--------- 288 (504)
...+..++|||||++|+.++.+ ..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.
T Consensus 162 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 162 ATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp -EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred CEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 3468899999999998877644 3699999999987653 212223467899999 88888876654
Q ss_pred -----EEEEeCCCCCCc-ceeEEeccCCcCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCCeE--EEEeecCCCCC
Q 010669 289 -----VRVWQGSEDGNY-DCKHTLKDHTAEVQAVTVHATNKYFVTASLDN-----TWCFYDLSSGIC--LTQVSDAGTDG 355 (504)
Q Consensus 289 -----i~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg-----~i~iwd~~~~~~--~~~~~~~~~~~ 355 (504)
|.+|++.++... ..+.....+...+..+.|+|+|++|+..+.++ .|.+||+.++.. ...+..
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~----- 314 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP----- 314 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-----
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-----
Confidence 889998764211 12222223334688999999999988877544 899999988721 333331
Q ss_pred CCCCeEEEEECCCCCEEEEEeCC----CcEEEEEcCCC--ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcC
Q 010669 356 RPEGYTSAAFHPDGLILGTGTSE----ALVKIWDVKSQ--ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428 (504)
Q Consensus 356 ~~~~v~~~~~~pdg~~l~~g~~d----g~I~iwd~~~~--~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~ 428 (504)
+...+... ++|+|..|+..+.+ +.|.+||+.++ .....+..+...+..+.|+ ++.++++...++ .+||.+.
T Consensus 315 ~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 315 DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 12233333 34888888877653 45999999875 2333334445567778887 667778877776 4444332
Q ss_pred -CCcceeeeecCCCCCCeeEEEECCCCCEEEEE-e-Cc----EEEEEe
Q 010669 429 -KLKNFRSFESSDSETPTNSVDFDHSGSYLAVA-S-AD----IRVYQV 469 (504)
Q Consensus 429 -~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~-~-~d----i~vw~~ 469 (504)
++.....+..+. ...+..+.++|++..|+.. + .. +.+||+
T Consensus 393 ~~g~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 393 LDGKPAGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp TTSCEEEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred CCCCceeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 345555554422 4568889999998755533 2 22 666665
No 200
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=1.3e-13 Score=134.01 Aligned_cols=171 Identities=15% Similarity=0.078 Sum_probs=133.7
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc-----------eEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEe
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ-----------IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~-----------~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd 293 (504)
+++.+++++...++++|+.++ +.+|++.+.. ..... .+.+ |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 588999999999999999885 6669754322 11122 3556 999999 88999998 889999999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~ 373 (504)
+.+.. .......|...+.++.+.+. .+++++.||.+.+||+.++.... +. ..|+|++|+|+| ++
T Consensus 113 v~sl~---~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~--------~~Vs~v~WSpkG--~~ 176 (388)
T 1xip_A 113 LEELS---EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LA--------QNVTSFDVTNSQ--LA 176 (388)
T ss_dssp SSSTT---CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EE--------ESEEEEEECSSE--EE
T ss_pred chhhh---ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-cc--------CCceEEEEcCCc--eE
Confidence 98753 33345567777888877654 38899999999999999887654 22 369999999999 67
Q ss_pred EEeCCCcEEEEEcCCCce--eeee------e---CCCCCeEEEEEcCCCcEEEEE
Q 010669 374 TGTSEALVKIWDVKSQAN--VAKF------D---GHVGAVTAISFSENGYYLATA 417 (504)
Q Consensus 374 ~g~~dg~I~iwd~~~~~~--~~~~------~---~~~~~i~~l~~s~~g~~l~s~ 417 (504)
.|..||.+++|+...+.. ..++ . +|...|.+|.|.+++.++++-
T Consensus 177 vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 899999999999877664 4455 2 367889999999999998874
No 201
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.55 E-value=2.4e-15 Score=116.02 Aligned_cols=52 Identities=23% Similarity=0.422 Sum_probs=49.7
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
|.|+||+++|++||++| |||+|||.+|++|+..+++||+|+++|+.++|+|-
T Consensus 30 ~~CpI~~~~m~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 30 FRDPLMDTLMTDPVRLP-SGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp TBCTTTCSBCSSEEEET-TTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEEC
T ss_pred hCCcCccCcccCCeECC-CCCEEchHHHHHHHHcCCCCCCCCCCCChhhceEC
Confidence 57999999999999997 99999999999999989999999999999999876
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=9.3e-13 Score=123.43 Aligned_cols=208 Identities=13% Similarity=0.080 Sum_probs=154.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCC-cCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCC
Q 010669 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT-AEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354 (504)
Q Consensus 276 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 354 (504)
.+++|++++.|+.|.+||..++ +.+..+..+. ..+.++.+.|+|++++ +.++.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG---~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~---- 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK---EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA---- 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT---EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC----
T ss_pred CCcEEEeeCCCCEEEEEECCCC---eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC----
Confidence 4678999999999999998776 5666666655 4688999999999888 45788999999 7888887763
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCCCceeeeee------CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEE
Q 010669 355 GRPEGYTSAAFHPDGLILGTGTS-EALVKIWDVKSQANVAKFD------GHVGAVTAISFSENGYYLATAAHDG-VKLWD 426 (504)
Q Consensus 355 ~~~~~v~~~~~~pdg~~l~~g~~-dg~I~iwd~~~~~~~~~~~------~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd 426 (504)
.....+.++.+.++|+++++.+. ++.|..+|. +++.+..+. .+......+++.++|.++++...++ |..||
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence 12246889999999999999887 788888885 777766654 1223455678899999999998888 99999
Q ss_pred cCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCC----CCceeEEEEeecC
Q 010669 427 LRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG----TGAASFLFLFVLG 500 (504)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~----~~~v~~l~~~~~g 500 (504)
.. ++.+..+... ..+.++.+.++|+++++++.+ +..++. .+++.+-++..+.. -..++++...++|
T Consensus 153 ~~-G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~----~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G 224 (276)
T 3no2_A 153 PN-GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNL----ESNRIVRRVNANDIEGVQLFFVAQLFPLQNG 224 (276)
T ss_dssp TT-SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECT----TTCCEEEEEEGGGSBSCCCSEEEEEEECTTS
T ss_pred CC-CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeC----cCCcEEEEecCCCCCCccccccccceEcCCC
Confidence 88 9988888764 356678889999999888776 555554 33555555543210 1225566666665
Q ss_pred cc
Q 010669 501 QT 502 (504)
Q Consensus 501 ~~ 502 (504)
.+
T Consensus 225 ~i 226 (276)
T 3no2_A 225 GL 226 (276)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.54 E-value=2.4e-12 Score=124.70 Aligned_cols=254 Identities=12% Similarity=0.078 Sum_probs=174.2
Q ss_pred EEEeccCCCEEEEEe----------CCCcEEEEcCCCCceEEEcccCc-------cceeEEEEeeCCCEEEEEeC--CCc
Q 010669 228 SLDIHYSKDVIATGG----------VDTNAVLFDRPSGQIVTTLSGHS-------KKVTSVKFVTEGDLFLTGSA--DKT 288 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h~-------~~v~~l~~s~~~~~l~s~s~--dg~ 288 (504)
.+.++|||++++++. .++.|.+||..+++.+.++.-.. .....+.|+|||++++++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999877765 36789999999999888875321 24567999999999888864 689
Q ss_pred EEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCCCCCCe-EEEEEC
Q 010669 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS-GICLTQVSDAGTDGRPEGY-TSAAFH 366 (504)
Q Consensus 289 i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v-~~~~~~ 366 (504)
|.++|+.+. +.+.++... + . ...+....+.+++.+.||.+.+.++.+ ++...... .........+ ....|.
T Consensus 162 VsVID~~t~---~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 162 VGVVDLEGK---AFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT-EVFHPEDEFLINHPAYS 234 (386)
T ss_dssp EEEEETTTT---EEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-CCCSCTTSCBCSCCEEE
T ss_pred EEEEECCCC---cEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec-ceeccccccccccceeE
Confidence 999999886 555655422 1 1 222333456777888999999999976 55432211 1111111222 224564
Q ss_pred -CCCCEEEEEeCCCcEEEEEcCCCc--eeeeee---------C-CCCCeEEEEEcCCCcEEEEEeC----------Cc-E
Q 010669 367 -PDGLILGTGTSEALVKIWDVKSQA--NVAKFD---------G-HVGAVTAISFSENGYYLATAAH----------DG-V 422 (504)
Q Consensus 367 -pdg~~l~~g~~dg~I~iwd~~~~~--~~~~~~---------~-~~~~i~~l~~s~~g~~l~s~~~----------d~-v 422 (504)
++|++++ .+.+|.|+++|+.... .+..+. + ..+....+++++++..++.... .+ |
T Consensus 235 ~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 235 QKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 6887655 4558999999997654 222221 0 1223445778998888877642 13 9
Q ss_pred EEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEEEeC-c--EEEEEeeccCccceeEEEccCCCCCCceeEEEEee
Q 010669 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASA-D--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFV 498 (504)
Q Consensus 423 ~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~~~-d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~ 498 (504)
.++|+.+++.+..+... ..++++.|++|++ +|++... + +.++|. .+++.++++.. .+.-..|.+++
T Consensus 314 ~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~----~t~k~~~~i~~---~~~p~~l~~s~ 383 (386)
T 3sjl_D 314 VVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDA----ESGEELRSVNQ---LGHGPQVITTA 383 (386)
T ss_dssp EEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEET----TTCCEEEEECC---CCSSCCEEEEC
T ss_pred EEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEEC----CCCcEEEEecC---CCCCceeEECC
Confidence 99999999999998874 4788999999997 7776543 2 999998 77888888866 34456666666
Q ss_pred c
Q 010669 499 L 499 (504)
Q Consensus 499 ~ 499 (504)
|
T Consensus 384 d 384 (386)
T 3sjl_D 384 D 384 (386)
T ss_dssp C
T ss_pred c
Confidence 5
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=1.4e-11 Score=122.27 Aligned_cols=240 Identities=12% Similarity=0.100 Sum_probs=160.8
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCC--cEEEEeCCCCCCcc
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK--TVRVWQGSEDGNYD 301 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~ 301 (504)
.....++|+++++++++...++.|++||..++......... .... ++|+++++.|+++..++ .|.+|+........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 45789999999998888888899999999877765554432 2334 99999999988888766 78888876542111
Q ss_pred eeEEecc-CCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCC--eEEEEECC-CCCEEEEEeC
Q 010669 302 CKHTLKD-HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEG--YTSAAFHP-DGLILGTGTS 377 (504)
Q Consensus 302 ~~~~~~~-h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--v~~~~~~p-dg~~l~~g~~ 377 (504)
....+.. ....+.+++++|++..|+.+..++.|..||..++....... ....+.... ...++|+| ++.++++-..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~-~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQ-LELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEE-CCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEec-ccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 1111112 44667899999965556667788999999998776433211 001111111 23899999 5677777777
Q ss_pred CCcEEEEEcCCCceeeeeeCCC---------------CCeEEEEEcCCCcEEEEEe-CCc-EEEEEcCCCcceeeeecCC
Q 010669 378 EALVKIWDVKSQANVAKFDGHV---------------GAVTAISFSENGYYLATAA-HDG-VKLWDLRKLKNFRSFESSD 440 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~---------------~~i~~l~~s~~g~~l~s~~-~d~-v~vwd~~~~~~~~~~~~~~ 440 (504)
++.|+.||.... +..+.++. .....++|+++|.++++-. .+. |+.||+.++.. ..+....
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 899999997543 33333221 3578999999999666665 555 99999877654 3332210
Q ss_pred -------------CCCCeeEEEECCCCCEEEEEeCc--EEEEEe
Q 010669 441 -------------SETPTNSVDFDHSGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 441 -------------~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~ 469 (504)
.-.....++++++|.++++-..+ |+.+.+
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 01357899999997766666555 555543
No 205
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.53 E-value=1.7e-12 Score=120.99 Aligned_cols=200 Identities=11% Similarity=-0.007 Sum_probs=145.3
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCccee
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
..+.+++++++|+++++.. ++.|.+||................+.+++++++|+++++...++.|.+|+..+. ...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~---~~~ 142 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK---TQT 142 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC---SCE
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc---eeE
Confidence 4577899999999766665 889999998765443222233356899999999998777777889999975442 222
Q ss_pred EEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 010669 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383 (504)
Q Consensus 304 ~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~i 383 (504)
.........+.+++++++|+++++...++.|.+||........... .....+..++++++|.++++...++.|.+
T Consensus 143 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~p~~i~~d~~g~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 143 VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF-----TDITAPWGIAVDEAGTVYVTEHNTNQVVK 217 (270)
T ss_dssp ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC-----SSCCSEEEEEECTTCCEEEEETTTSCEEE
T ss_pred eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc-----cCCCCceEEEECCCCCEEEEECCCCcEEE
Confidence 2122233467889999999977777778899999998765443221 22256889999999988888778899999
Q ss_pred EEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc
Q 010669 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432 (504)
Q Consensus 384 wd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~ 432 (504)
||............+...+.+++++++|.++++...++ |++|++...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 218 LLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 99866543332223335789999999999777777777 99999876543
No 206
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.53 E-value=4.9e-15 Score=113.80 Aligned_cols=52 Identities=33% Similarity=0.449 Sum_probs=49.3
Q ss_pred CccccCCCCCCCceEeCCCC-eeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSG-LLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
|.|+||+++|++||+++ +| |+|||.+|++|+.++++||+|+++|+.++|+|-
T Consensus 23 ~~CpI~~~~m~dPV~~~-cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~pn 75 (98)
T 1wgm_A 23 FLDPIMSTLMCDPVVLP-SSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPN 75 (98)
T ss_dssp TBCTTTCSBCSSEEECT-TTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEEC
T ss_pred cCCcCccccccCCeECC-CCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceEc
Confidence 57999999999999997 78 999999999999999999999999999999876
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=6.3e-12 Score=119.24 Aligned_cols=224 Identities=13% Similarity=0.069 Sum_probs=152.9
Q ss_pred CeEEEEeccCC-CEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCccee
Q 010669 225 GIVSLDIHYSK-DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 225 ~I~~~~~s~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
-.-+..|++++ .++++...++.|+.||..+++. ..+. ....+.+++++++|+++++ . ++.|.+||..++. ...+
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~-~~~~ 88 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS-AVVL 88 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE-EEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc-EEEE
Confidence 35578899964 5667777789999999987765 2332 3467999999999995554 4 5679999987642 1222
Q ss_pred EEecc--CCcCeEEEEEccCCCEEEEEeC-----------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 304 HTLKD--HTAEVQAVTVHATNKYFVTASL-----------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 304 ~~~~~--h~~~v~~l~~~p~~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
..... ....+.+++++|+|+++++... .+.|..+|.. +....... .....+.++|+||++
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~------~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD------QVDISNGLDWSLDHK 161 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE------EESBEEEEEECTTSC
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee------ccccccceEEcCCCC
Confidence 22111 1245789999999997665432 1344444443 33222221 113467899999998
Q ss_pred EEE-EEeCCCcEEEEEc--CCCce-----eeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCC
Q 010669 371 ILG-TGTSEALVKIWDV--KSQAN-----VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441 (504)
Q Consensus 371 ~l~-~g~~dg~I~iwd~--~~~~~-----~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~ 441 (504)
.|+ +.+.++.|.+||+ .++.. +..+..+.+.+..++++++|++.++...++ |.+||..+++.+..+..+
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p-- 239 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP-- 239 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS--
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC--
Confidence 664 5556789999997 44432 223333446788999999998777776666 999999989888888765
Q ss_pred CCCeeEEEEC-CCCCEEEEEeC
Q 010669 442 ETPTNSVDFD-HSGSYLAVASA 462 (504)
Q Consensus 442 ~~~v~~i~~~-~~g~~l~~~~~ 462 (504)
...+++++|. |+++.|++++.
T Consensus 240 ~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 240 VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCceEEEEeCCCCCEEEEEcC
Confidence 4578999998 88887776654
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=9.9e-11 Score=110.48 Aligned_cols=233 Identities=10% Similarity=0.038 Sum_probs=164.2
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEE-EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT-TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
...+.+++++++|++.++...++.|..||.. ++... .+......+.++++.++++++++...++.|..||.. +. .
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~--~ 136 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT--I 136 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC--E
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC--E
Confidence 3568899999999988877778899999987 55432 223234678999999999888877778899999876 31 1
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I 381 (504)
....+......+.++++.++++.+++...++.|..||. +++... +.. ......+..++++++|.++++....+.|
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~---~~~~~~~~~i~~d~~g~l~v~~~~~~~i 211 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPL---PTNAAAPVGITSGNDGALWFVEIMGNKI 211 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC---SSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeC---CCCCCCcceEEECCCCCEEEEccCCCEE
Confidence 11223334467899999999997777666889999998 555443 221 1223468899999999888877777889
Q ss_pred EEEEcCCCceeee-eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEE
Q 010669 382 KIWDVKSQANVAK-FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459 (504)
Q Consensus 382 ~iwd~~~~~~~~~-~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~ 459 (504)
.+||. +++.... +..+...+.+++++++|.++++...++ |..||. ++.. ..+........+.+++++++|.+.++
T Consensus 212 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~ 288 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTI-QEYQLQTENAEPHGITFGKDGSVWFA 288 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCE-EEEECCSTTCCCCCEEECTTSCEEEE
T ss_pred EEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcE-EEEECCccCCccceeEeCCCCCEEEE
Confidence 99998 4443332 233456789999999998666665545 999998 3433 33433322456889999999987666
Q ss_pred EeCcEEEEEe
Q 010669 460 ASADIRVYQV 469 (504)
Q Consensus 460 ~~~di~vw~~ 469 (504)
.. . .|+.+
T Consensus 289 ~~-~-~i~~~ 296 (300)
T 2qc5_A 289 LK-C-KIGKL 296 (300)
T ss_dssp CS-S-EEEEE
T ss_pred cc-C-ceEEe
Confidence 55 5 44444
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.51 E-value=7.7e-11 Score=115.29 Aligned_cols=239 Identities=10% Similarity=-0.014 Sum_probs=163.3
Q ss_pred EEEeccCCCEEEEEe----------CCCcEEEEcCCCCceEEEcccC-------ccceeEEEEeeCCCEEEEEeC--CCc
Q 010669 228 SLDIHYSKDVIATGG----------VDTNAVLFDRPSGQIVTTLSGH-------SKKVTSVKFVTEGDLFLTGSA--DKT 288 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~s~~~~~l~s~s~--dg~ 288 (504)
.+.++|||++++++. .++.|.+||..+.+.+..+... ......+.|+|||++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999988875 3678999999988887766422 123468999999999998874 578
Q ss_pred EEEEeCCCCCCcceeEE-eccCCcCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCC-CCCCCCCeEEEEE
Q 010669 289 VRVWQGSEDGNYDCKHT-LKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAG-TDGRPEGYTSAAF 365 (504)
Q Consensus 289 i~iwd~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~ 365 (504)
|.++| .++ +.+.. +.. .+ ++.+.|++ ..+++.+.||.+.++|. +++......... ..+.........+
T Consensus 150 v~viD-~t~---~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~ 220 (373)
T 2mad_H 150 VGLVV-QGG---SSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQ 220 (373)
T ss_pred EEEEE-CCC---CEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeeccee
Confidence 99999 775 44454 432 12 24455555 45667778999999999 777663322000 0011111223456
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCc--eeeeeeC----------CCCCeEEEEEcCCCcEEEEEeC----------Cc-E
Q 010669 366 HPDGLILGTGTSEALVKIWDVKSQA--NVAKFDG----------HVGAVTAISFSENGYYLATAAH----------DG-V 422 (504)
Q Consensus 366 ~pdg~~l~~g~~dg~I~iwd~~~~~--~~~~~~~----------~~~~i~~l~~s~~g~~l~s~~~----------d~-v 422 (504)
.+++..++..+..+.+.+.|+.... .+..+.. .......+.+++++..++++.. .+ |
T Consensus 221 ~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 221 ANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred EecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence 6665554444578899999997553 2222221 1123445789999888777643 23 9
Q ss_pred EEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEEEeC-c--EEEEEeeccCccceeEEEc
Q 010669 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASA-D--IRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 423 ~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~~~-d--i~vw~~~~~~~~~~~i~~~ 482 (504)
.++|+.+++.+..+... ....+++|+|||+ +++++.. + +.+||. .+++.+.++
T Consensus 301 ~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~----~t~~vv~~i 357 (373)
T 2mad_H 301 TSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYDA----GAGDQDQST 357 (373)
T ss_pred EEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEEEEEC----CCCCEEeee
Confidence 99999999998988753 4689999999999 6777653 3 999998 678888774
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=1.3e-11 Score=117.44 Aligned_cols=229 Identities=10% Similarity=0.088 Sum_probs=157.5
Q ss_pred CCeEEEEeccCCC-EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 224 PGIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 224 ~~I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
.......|+++|+ +++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.. + ....
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g-~~~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G-QAHL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S-CEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C-CEEE
Confidence 3467889999998 6677778899999987 454 34555566778999999999976666566789999875 2 2121
Q ss_pred eE-EeccC-CcCeEEEEEccCCCEEEE----EeC-------------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEE
Q 010669 303 KH-TLKDH-TAEVQAVTVHATNKYFVT----ASL-------------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363 (504)
Q Consensus 303 ~~-~~~~h-~~~v~~l~~~p~~~~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 363 (504)
+. ...+. ...+.++.++|+|+++++ |.. .+.|..||..+++..... . . .....+
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~----~~p~gl 193 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--L----DHPNGL 193 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--E----SSEEEE
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--C----CCCcce
Confidence 11 11111 134678999999998886 332 256888887666543322 1 1 246789
Q ss_pred EECCCCCEEEEEeCC------CcEEEEEcCCCce--eeee-eCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCccee
Q 010669 364 AFHPDGLILGTGTSE------ALVKIWDVKSQAN--VAKF-DGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFR 434 (504)
Q Consensus 364 ~~~pdg~~l~~g~~d------g~I~iwd~~~~~~--~~~~-~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~ 434 (504)
+|+||++.|+++... +.|.+||+..+.. ...+ ....+.+..++++++|++.+ ++.++|.+||. .++.+.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGTGVCVFDS-DGQLLG 271 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSSEEEEECT-TSCEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCCcEEEECC-CCCEEE
Confidence 999999988777665 7899999875431 1111 11234566789999999544 44567999998 567777
Q ss_pred eeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEE
Q 010669 435 SFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQ 468 (504)
Q Consensus 435 ~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~ 468 (504)
.+..+. .+.+++|+++++.|++++.+ +..++
T Consensus 272 ~~~~~~---~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 272 HIPTPG---TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp EEECSS---CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred EEECCC---ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 776642 58899999999988888877 44333
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=6.2e-11 Score=113.99 Aligned_cols=221 Identities=12% Similarity=0.065 Sum_probs=149.4
Q ss_pred eEEEEeccCCC-EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 226 IVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 226 I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
..+..|+|++. ++++...++.|..||..+++.. .+. ....+.+++|+++|+++++. .+ .|.+||..++. ...+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~-~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGV-LTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC-EEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCc-EEEEe
Confidence 46788999754 6667767889999999877543 333 34679999999999877654 44 49999987642 12121
Q ss_pred Eecc--CCcCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE-
Q 010669 305 TLKD--HTAEVQAVTVHATNKYFVTASL------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG- 375 (504)
Q Consensus 305 ~~~~--h~~~v~~l~~~p~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g- 375 (504)
.... ....+.++.++|+|+++++... .+.|..+| +++...... .......++|+|||+.++.+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~------~~~~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA------DISIPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE------EESSEEEEEECTTSCEEEEEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC------CCcccCCeEEcCCCCEEEEEE
Confidence 1111 1235889999999997765542 24566666 454433221 11246789999999866554
Q ss_pred eCCCcEEEEEcC--CC-ce-----eeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCee
Q 010669 376 TSEALVKIWDVK--SQ-AN-----VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN 446 (504)
Q Consensus 376 ~~dg~I~iwd~~--~~-~~-----~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~ 446 (504)
+.++.|.+||+. ++ .. +..+......+..++++++|.++++...++ |.+||. +++.+..+..+ ...+.
T Consensus 198 ~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~--~~~~~ 274 (326)
T 2ghs_A 198 TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP--GKQTT 274 (326)
T ss_dssp TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS--CSBEE
T ss_pred CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC--CCCcE
Confidence 557899999986 55 31 222333345678899999998777765555 999998 56666666654 35689
Q ss_pred EEEEC-CCCCEEEEEeC
Q 010669 447 SVDFD-HSGSYLAVASA 462 (504)
Q Consensus 447 ~i~~~-~~g~~l~~~~~ 462 (504)
+++|+ +++..|++++.
T Consensus 275 ~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEESTTSCEEEEEEB
T ss_pred EEEEecCCCCEEEEEec
Confidence 99998 88887766554
No 212
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=99.47 E-value=2.4e-14 Score=121.39 Aligned_cols=52 Identities=37% Similarity=0.629 Sum_probs=48.9
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCC-CCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGK-CPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~ 53 (504)
|+|+||+++|.+||++| |||+|||.+|++|+..+|. ||+|+++|+..+|+|-
T Consensus 107 f~CPI~~elm~DPV~~~-~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN 159 (179)
T 2f42_A 107 LCGKISFELMREPCITP-SGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPN 159 (179)
T ss_dssp GBCTTTCSBCSSEEECT-TSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEEC
T ss_pred hcccCccccCCCCeECC-CCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcch
Confidence 57999999999999996 9999999999999998875 9999999999999886
No 213
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=3e-14 Score=109.12 Aligned_cols=53 Identities=28% Similarity=0.471 Sum_probs=47.9
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC------CCCCCCCC---CCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG------KCPVTGEP---LTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~~~~---~~~~~~~~~ 53 (504)
|.|+||+++|++||++|++||+|||.+|++|+.+++ +||+||.+ |+.++|++-
T Consensus 8 ~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn 69 (94)
T 2yu4_A 8 FTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQD 69 (94)
T ss_dssp CBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEEC
T ss_pred eECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCC
Confidence 579999999999999977999999999999999862 89998887 888898765
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.47 E-value=1.2e-11 Score=121.99 Aligned_cols=238 Identities=12% Similarity=0.069 Sum_probs=160.9
Q ss_pred cCCCEEEEEeC-C----CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEe----------CCCcEEEEeCCCC
Q 010669 233 YSKDVIATGGV-D----TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS----------ADKTVRVWQGSED 297 (504)
Q Consensus 233 ~~~~~l~sg~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s----------~dg~i~iwd~~~~ 297 (504)
++++.+++... + +.|.++|..+++.+.++.....+ .++++||+++++++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 35554444433 2 69999999999999998755555 899999999888776 3678999999886
Q ss_pred CCcceeEEeccC-------CcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCC-C-CCCCeEEE---
Q 010669 298 GNYDCKHTLKDH-------TAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTD-G-RPEGYTSA--- 363 (504)
Q Consensus 298 ~~~~~~~~~~~h-------~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~-~-~~~~v~~~--- 363 (504)
+.+..+.-. ......+.|+|+|++++++.. ++.|.+.|+.+++.+..+...+.. . ....-..+
T Consensus 160 ---~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 160 ---LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNC 236 (426)
T ss_dssp ---CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEE
T ss_pred ---cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEc
Confidence 444444311 123457899999999999874 578999999999887776531100 0 00000112
Q ss_pred ----------------------------------EECCCCCEEEEEeCCCcEEEEEcCCCcee--eeeeC----------
Q 010669 364 ----------------------------------AFHPDGLILGTGTSEALVKIWDVKSQANV--AKFDG---------- 397 (504)
Q Consensus 364 ----------------------------------~~~pdg~~l~~g~~dg~I~iwd~~~~~~~--~~~~~---------- 397 (504)
.|.+++..++.....|.|.+.|+...... ..+..
T Consensus 237 ~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~ 316 (426)
T 3c75_H 237 RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDW 316 (426)
T ss_dssp TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTE
T ss_pred CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccc
Confidence 33444444444445566667776543211 11110
Q ss_pred CCCCeEEEEEcCCCcEEEEEeC----------Cc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEEEeC-c-
Q 010669 398 HVGAVTAISFSENGYYLATAAH----------DG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASA-D- 463 (504)
Q Consensus 398 ~~~~i~~l~~s~~g~~l~s~~~----------d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~~~-d- 463 (504)
.......++|++++..+++... .+ |.++|+.+.+.+.++... .....+.|+|+|+ ++++... +
T Consensus 317 ~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 317 RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTT
T ss_pred ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCC
Confidence 0111223689999887776642 23 999999999999999764 3589999999999 8888874 3
Q ss_pred -EEEEEeeccCccceeEEEc
Q 010669 464 -IRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 464 -i~vw~~~~~~~~~~~i~~~ 482 (504)
|.|+|. .+++.++++
T Consensus 394 ~VsVID~----~t~kvv~tI 409 (426)
T 3c75_H 394 TLHIYDA----ATGEELRSV 409 (426)
T ss_dssp EEEEEET----TTCCEEEEE
T ss_pred eEEEEEC----CCCCEEEEe
Confidence 999998 789999887
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=1.9e-10 Score=112.44 Aligned_cols=247 Identities=10% Similarity=-0.029 Sum_probs=165.0
Q ss_pred ccCCCEEEEEeC--CC---cEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEe----------CCCcEEEEeCCC
Q 010669 232 HYSKDVIATGGV--DT---NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS----------ADKTVRVWQGSE 296 (504)
Q Consensus 232 s~~~~~l~sg~~--dg---~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s----------~dg~i~iwd~~~ 296 (504)
.|+++++++... .+ .|.+||..+++.+..+.....+ .++++|||++++++. .++.|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356665555542 22 7899999999998888754444 999999999988876 367899999976
Q ss_pred CCCcceeEEeccC-------CcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEE-eecCCCCCCCCCeEEEEEC
Q 010669 297 DGNYDCKHTLKDH-------TAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQ-VSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 297 ~~~~~~~~~~~~h-------~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~ 366 (504)
. +.+..+... ......+.|+|+|++++++.. ++.|.++| .+++.+.. +... .|+.+.
T Consensus 107 ~---~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~---------~~~~~~ 173 (373)
T 2mad_H 107 F---LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP---------TCYHIH 173 (373)
T ss_pred C---cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC---------ceEEEE
Confidence 4 344433211 123458999999999998874 57899999 99988776 5311 134555
Q ss_pred CCC-CEEEEEeCCCcEEEEEcCCCceeeeee-----CCCCC-eEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc--ceeee
Q 010669 367 PDG-LILGTGTSEALVKIWDVKSQANVAKFD-----GHVGA-VTAISFSENGYYLATAAHDG-VKLWDLRKLK--NFRSF 436 (504)
Q Consensus 367 pdg-~~l~~g~~dg~I~iwd~~~~~~~~~~~-----~~~~~-i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~--~~~~~ 436 (504)
|++ ..+++.+.||.+.++|. +++.+.... ....+ .....|.+++..++..+..+ +.+.|+.... .+..+
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI 252 (373)
T ss_pred eCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence 654 45667778999999999 777663322 11122 22345666654444334555 9999987543 22233
Q ss_pred ecCC--------CCCCeeEEEECCCCCEEEEEeC------------cEEEEEeeccCccceeEEEccCCCCCCceeEEEE
Q 010669 437 ESSD--------SETPTNSVDFDHSGSYLAVASA------------DIRVYQVASVKADWNCIKTFPDLSGTGAASFLFL 496 (504)
Q Consensus 437 ~~~~--------~~~~v~~i~~~~~g~~l~~~~~------------di~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~ 496 (504)
.... .......+.++|+++.++++.. +|.++|. .+++.+.++.. .....++.|
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~---g~~p~~i~~ 325 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISL---GHDVDAISV 325 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEEC---CCCcCeEEE
Confidence 2110 0122445789999998887642 2777787 77888888865 446899999
Q ss_pred eecCc
Q 010669 497 FVLGQ 501 (504)
Q Consensus 497 ~~~g~ 501 (504)
+++|+
T Consensus 326 s~Dg~ 330 (373)
T 2mad_H 326 AQDGG 330 (373)
T ss_pred CCCCC
Confidence 99997
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.46 E-value=8.3e-12 Score=120.92 Aligned_cols=251 Identities=8% Similarity=0.010 Sum_probs=171.4
Q ss_pred EeccCCCEEEEEeC-----CCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEe----------CCCcEEEEeC
Q 010669 230 DIHYSKDVIATGGV-----DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS----------ADKTVRVWQG 294 (504)
Q Consensus 230 ~~s~~~~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s----------~dg~i~iwd~ 294 (504)
...|+++.+++... ++.|.++|..+++.+.++.....+ .++++|||+++++++ .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34578887777654 679999999999999988755555 499999999887775 3678999999
Q ss_pred CCCCCcceeEEeccC-------CcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEE
Q 010669 295 SEDGNYDCKHTLKDH-------TAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h-------~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 365 (504)
.+. +.+..+... ...-..+.|+|+|++++++.. ++.|.++|+.+++.+..+... + . ...+
T Consensus 117 ~t~---~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~---g----~-~~~~ 185 (386)
T 3sjl_D 117 VTL---LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP---D----C-YHIF 185 (386)
T ss_dssp TTC---CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC---S----E-EEEE
T ss_pred CCC---eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC---C----c-ceee
Confidence 886 445544321 123567899999999888864 689999999999998888521 1 1 1223
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCC-CceeeeeeC----CCCCeE-EEEEc-CCCcEEEEEeCCc-EEEEEcCCCc--ceee
Q 010669 366 HPDGLILGTGTSEALVKIWDVKS-QANVAKFDG----HVGAVT-AISFS-ENGYYLATAAHDG-VKLWDLRKLK--NFRS 435 (504)
Q Consensus 366 ~pdg~~l~~g~~dg~I~iwd~~~-~~~~~~~~~----~~~~i~-~l~~s-~~g~~l~s~~~d~-v~vwd~~~~~--~~~~ 435 (504)
....+.+++.+.||.+.+.++.. ++....... ...++. ...|. ++|++++.. .++ |+++|+.+.. ....
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs-~~g~V~v~d~~~~~~~v~~~ 264 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT-YTGKIHQIDLSSGDAKFLPA 264 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB-TTSEEEEEECTTSSCEECCC
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe-CCCEEEEEECCCCcceeecc
Confidence 22445677778888888888876 554321111 112222 24664 678666644 456 9999997654 3333
Q ss_pred eecCC--------CCCCeeEEEECCCCCEEEEEeC-----------c-EEEEEeeccCccceeEEEccCCCCCCceeEEE
Q 010669 436 FESSD--------SETPTNSVDFDHSGSYLAVASA-----------D-IRVYQVASVKADWNCIKTFPDLSGTGAASFLF 495 (504)
Q Consensus 436 ~~~~~--------~~~~v~~i~~~~~g~~l~~~~~-----------d-i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~ 495 (504)
+.... .......++++++++.+++... + |.++|. ++++.+..+.. ...+.+|.
T Consensus 265 ~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~----~t~kv~~~i~v---g~~~~~la 337 (386)
T 3sjl_D 265 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA----KTGERLAKFEM---GHEIDSIN 337 (386)
T ss_dssp EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEE---EEEECEEE
T ss_pred eeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC----CCCeEEEEEEC---CCCcceEE
Confidence 33100 0123445788999998888642 1 666666 78888888875 45788999
Q ss_pred EeecCc
Q 010669 496 LFVLGQ 501 (504)
Q Consensus 496 ~~~~g~ 501 (504)
|+++|+
T Consensus 338 vs~D~~ 343 (386)
T 3sjl_D 338 VSQDEK 343 (386)
T ss_dssp ECSSSS
T ss_pred ECCCCC
Confidence 999986
No 217
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.45 E-value=1.2e-11 Score=132.69 Aligned_cols=254 Identities=15% Similarity=0.046 Sum_probs=159.0
Q ss_pred cCCCEEEEEeCCCc---EEEE--cCC---CCceEEEc------ccCccceeEEEEeeCCCEEEEEeCC-----CcEEEEe
Q 010669 233 YSKDVIATGGVDTN---AVLF--DRP---SGQIVTTL------SGHSKKVTSVKFVTEGDLFLTGSAD-----KTVRVWQ 293 (504)
Q Consensus 233 ~~~~~l~sg~~dg~---i~vw--d~~---~~~~~~~~------~~h~~~v~~l~~s~~~~~l~s~s~d-----g~i~iwd 293 (504)
|+|++++....++. -.+| +.. .++....+ .+|...+..++|||||++|+.++.+ .+|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 78887766554332 3444 433 33322221 2333468899999999998876543 4699999
Q ss_pred CCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCe--------------EEEEECCCCeE--EEEeecCCCCCCC
Q 010669 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT--------------WCFYDLSSGIC--LTQVSDAGTDGRP 357 (504)
Q Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~--------------i~iwd~~~~~~--~~~~~~~~~~~~~ 357 (504)
+.++. .... ..+...+..++|+|| +.|+.++.++. |++|++.++.. ...+. ...+.
T Consensus 196 l~tg~---~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~---~~~~~ 267 (741)
T 1yr2_A 196 VADGK---PLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA---TPELP 267 (741)
T ss_dssp TTTCC---EEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC---CTTCT
T ss_pred CCCCC---CCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec---cCCCC
Confidence 98863 2221 112222357899999 98888887654 89999987652 22222 11233
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-----cEEEEEcCCC--ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC----c-EEEE
Q 010669 358 EGYTSAAFHPDGLILGTGTSEA-----LVKIWDVKSQ--ANVAKFDGHVGAVTAISFSENGYYLATAAHD----G-VKLW 425 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~dg-----~I~iwd~~~~--~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d----~-v~vw 425 (504)
..+..+.|+|||++|+..+.++ .|++||+.++ +....+..+...+.... +|+|..|+..+.+ . |.+|
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEE
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEE
Confidence 4588999999999888877544 8999999876 31455555555555553 4788877776642 3 9999
Q ss_pred EcCCCc-ceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 426 DLRKLK-NFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 426 d~~~~~-~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
|+.++. ....+..+ ....+..+.|+ ++.++++...+ .+||.++. .+..+..+..+ +.+.+..+.++++|+
T Consensus 347 d~~~~~~~~~~l~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~---~g~~~~~l~~~-~~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 347 DLSGSTPRFDTVVPE-SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL---DGKPAGAVSLP-GIGSASGLSGRPGDR 419 (741)
T ss_dssp ECSSSSCEEEEEECC-CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET---TSCEEEECBCS-SSCEEEEEECCBTCS
T ss_pred eCCCCccccEEEecC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC---CCCceeeccCC-CCeEEEEeecCCCCC
Confidence 998752 33333322 23456677887 55566666666 67777642 24455555432 256788888888775
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.43 E-value=3.1e-12 Score=124.44 Aligned_cols=175 Identities=16% Similarity=0.082 Sum_probs=131.0
Q ss_pred ceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC--------CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEE
Q 010669 267 KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG--------NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338 (504)
Q Consensus 267 ~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~--------~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd 338 (504)
.++.+++++...++++|+.++ +.+|+..... ........ .+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999985 5669854321 01222222 3556 999999 89999998 889999999
Q ss_pred CCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEe
Q 010669 339 LSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418 (504)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~ 418 (504)
+.+........ .+...+.++.+.+.. +++++.||.|.+||++++.... +...|+|++|||+| ++.|.
T Consensus 113 v~sl~~~~~~~-----~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 113 LEELSEFRTVT-----SFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp SSSTTCEEEEE-----ECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEE
T ss_pred chhhhccCccc-----eeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEE
Confidence 98766444443 233457777776643 8888999999999999877643 34589999999999 66788
Q ss_pred CCc-EEEEEcCCCcc--eeeeec----C---CCCCCeeEEEECCCCCEEEEE
Q 010669 419 HDG-VKLWDLRKLKN--FRSFES----S---DSETPTNSVDFDHSGSYLAVA 460 (504)
Q Consensus 419 ~d~-v~vwd~~~~~~--~~~~~~----~---~~~~~v~~i~~~~~g~~l~~~ 460 (504)
.|+ +++|+...... ...+.. . .+...|.++.|.+++.++++-
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 888 99998877664 445521 1 135789999999999999874
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=4.6e-10 Score=106.30 Aligned_cols=225 Identities=12% Similarity=0.129 Sum_probs=146.9
Q ss_pred CccceeEEEEeeC-CCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCC
Q 010669 264 HSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342 (504)
Q Consensus 264 h~~~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~ 342 (504)
+..-.-+..|+++ +.++++...++.|..||..++. ...+ .....+.+++++++|+++++ . ++.|.+||..++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~----~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ----VQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc----EEEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 3344567899985 4566677778999999988642 2222 23467999999999995554 3 568999999988
Q ss_pred eEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC---------CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcE
Q 010669 343 ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE---------ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413 (504)
Q Consensus 343 ~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d---------g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~ 413 (504)
+........ .......+..++++|+|+++++.... ..-.||.+.....+..+..+....+.++|+|+|+.
T Consensus 84 ~~~~~~~~~-~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 84 SAVVLATVD-NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEEEECC-TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCE
T ss_pred cEEEEEecC-CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCE
Confidence 754433211 11123457899999999977654321 22344544322222223333446789999999987
Q ss_pred EEEEeC-Cc-EEEEEc--CCCcce--eeee-cCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccC
Q 010669 414 LATAAH-DG-VKLWDL--RKLKNF--RSFE-SSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 414 l~s~~~-d~-v~vwd~--~~~~~~--~~~~-~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~ 484 (504)
|+.+.. ++ |.+||+ .++... ..+. .......+..++++++|++.++.... |.+|+. .+++.+..+..
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~----~tG~~~~~i~~ 238 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP----VTGKRLQTVKL 238 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT----TTCCEEEEEEC
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC----CCceEEEEEEC
Confidence 766554 44 999987 344321 1121 11113467899999999877776655 777775 45778888876
Q ss_pred CCCCCceeEEEEe-ecCcc
Q 010669 485 LSGTGAASFLFLF-VLGQT 502 (504)
Q Consensus 485 h~~~~~v~~l~~~-~~g~~ 502 (504)
+ ...+++++|. ++++.
T Consensus 239 p--~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 239 P--VDKTTSCCFGGKNYSE 255 (297)
T ss_dssp S--SSBEEEEEEESGGGCE
T ss_pred C--CCCceEEEEeCCCCCE
Confidence 5 5689999998 77653
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.41 E-value=3e-11 Score=128.47 Aligned_cols=229 Identities=15% Similarity=0.101 Sum_probs=148.6
Q ss_pred CCCCCeEEEEeccCCCEEEEE-----eCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCc-------
Q 010669 221 TSKPGIVSLDIHYSKDVIATG-----GVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT------- 288 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg-----~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~------- 288 (504)
+|...+..++|||||++|+.+ +....|++||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 355578899999999988843 33357999999999865431 111123678999 9999888887743
Q ss_pred ------EEEEeCCCCCCc-ceeEEecc-CCcCeEEEEEccCCCEEEEEeC----CCeEEEEECCCCe-EEEEeecCCCCC
Q 010669 289 ------VRVWQGSEDGNY-DCKHTLKD-HTAEVQAVTVHATNKYFVTASL----DNTWCFYDLSSGI-CLTQVSDAGTDG 355 (504)
Q Consensus 289 ------i~iwd~~~~~~~-~~~~~~~~-h~~~v~~l~~~p~~~~l~s~s~----dg~i~iwd~~~~~-~~~~~~~~~~~~ 355 (504)
|++|++.+.... ..+..... |...+..+.|+|+|++|+.... +..|.++|+.++. ....+..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~----- 278 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG----- 278 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC-----
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC-----
Confidence 999998765311 22333333 4456788999999998765443 3589999998763 2333331
Q ss_pred CCCCeEEEEECCCCCEEE-EEeCC---CcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeC-Cc---EEEE
Q 010669 356 RPEGYTSAAFHPDGLILG-TGTSE---ALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAH-DG---VKLW 425 (504)
Q Consensus 356 ~~~~v~~~~~~pdg~~l~-~g~~d---g~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~-d~---v~vw 425 (504)
+....... ++++|..|+ ....+ +.|..+|+.++.. ...+..|...+. .|++++.+|+.... ++ |++|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 22233333 566555544 44333 6799999987654 345655665554 88888887776654 43 8999
Q ss_pred EcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEe
Q 010669 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS 461 (504)
Q Consensus 426 d~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~ 461 (504)
|+..+ ....+.... ...+..+.+++++..++...
T Consensus 356 d~~g~-~~~~l~~p~-~~~~~~~~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 356 DYEGK-RVREVALPG-LGSVSGFNGKHDDPALYFGF 389 (693)
T ss_dssp CTTSC-EEEEECCSS-SSEEEECCCCTTCSCEEEEE
T ss_pred ECCCC-eeEEeecCC-CceEEeeecCCCCCEEEEEe
Confidence 98743 444454332 34577778888887665543
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.39 E-value=1.2e-10 Score=110.83 Aligned_cols=222 Identities=14% Similarity=0.129 Sum_probs=147.1
Q ss_pred ccceeEEEEeeCCCEEEE-------EeCCCcEEEEeCCCCCCcceeEEec-----cCCcCeEEEEEccC-CCEEEEEeCC
Q 010669 265 SKKVTSVKFVTEGDLFLT-------GSADKTVRVWQGSEDGNYDCKHTLK-----DHTAEVQAVTVHAT-NKYFVTASLD 331 (504)
Q Consensus 265 ~~~v~~l~~s~~~~~l~s-------~s~dg~i~iwd~~~~~~~~~~~~~~-----~h~~~v~~l~~~p~-~~~l~s~s~d 331 (504)
-....+++|++++.++++ +..++.|.+||..++. . ..+. ++...+.++.++++ ++++++ +..
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~---~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~ 91 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK---K-TVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMR 91 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC---E-EEEECCEETTEECCEEEEEECSSSSEEEEE-ETT
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc---E-EEEEecccCCCCCCCceEEEecCCCcEEEE-ECC
Confidence 345688999999987777 5778899999976642 2 1222 24567899999998 665544 445
Q ss_pred CeEEEEECCCCeEEEE-eecCCCCCCCCCeEEEEECCCCCEEEEEeCC---------------CcEEEEEcCCCceeeee
Q 010669 332 NTWCFYDLSSGICLTQ-VSDAGTDGRPEGYTSAAFHPDGLILGTGTSE---------------ALVKIWDVKSQANVAKF 395 (504)
Q Consensus 332 g~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d---------------g~I~iwd~~~~~~~~~~ 395 (504)
+.|.+||.. ++.... .... .......+.+++++++|+++++...+ +.|..||.. ++... +
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~ 167 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-V 167 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-E
T ss_pred CCEEEEeCC-CCEEEEEeccC-CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-e
Confidence 579999998 665433 2111 11122458899999999988877655 567777765 54333 2
Q ss_pred eCCCCCeEEEEEc----CCCcEEEEEe-CCc-EEEEEcC-CCcce--eeee-cCCCC-CCeeEEEECCCCCEEEEEeCc-
Q 010669 396 DGHVGAVTAISFS----ENGYYLATAA-HDG-VKLWDLR-KLKNF--RSFE-SSDSE-TPTNSVDFDHSGSYLAVASAD- 463 (504)
Q Consensus 396 ~~~~~~i~~l~~s----~~g~~l~s~~-~d~-v~vwd~~-~~~~~--~~~~-~~~~~-~~v~~i~~~~~g~~l~~~~~d- 463 (504)
..+......++|+ ++|..|+.+. .++ |.+||+. .++.. ..+. ..... ..+..++++++|+++++...+
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 2334467899999 9997665554 445 9999986 33311 1111 11112 457889999999988876544
Q ss_pred -EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 464 -IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 464 -i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
|.+|+. .+++.+..+..+ ...+.++.|.++|.
T Consensus 248 ~i~~~d~----~~g~~~~~~~~~--~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 248 HIEVFGP----DGGQPKMRIRCP--FEKPSNLHFKPQTK 280 (314)
T ss_dssp EEEEECT----TCBSCSEEEECS--SSCEEEEEECTTSS
T ss_pred EEEEEcC----CCCcEeEEEeCC--CCCceeEEECCCCC
Confidence 888875 335555555554 46789999988886
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=1.7e-10 Score=111.76 Aligned_cols=235 Identities=8% Similarity=0.044 Sum_probs=151.4
Q ss_pred CCeEEEEeccCCCEEEEEe--CCCcEEEEcCCCCceEEEc-------ccCccceeEEEEeeCCCEEEEEeC-----CCcE
Q 010669 224 PGIVSLDIHYSKDVIATGG--VDTNAVLFDRPSGQIVTTL-------SGHSKKVTSVKFVTEGDLFLTGSA-----DKTV 289 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~l~~s~~~~~l~s~s~-----dg~i 289 (504)
.....++++++|+++++.. .++.+.||.+.+++. ..+ ..|...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5688999999999988864 234244454435543 322 134567999999999886665433 5789
Q ss_pred EEEeCCCCCCcceeEEecc------CCcCeEEEEEccCCCEE-EEEe---CCCeEEEEECCCCeEEEEeecC-CCC----
Q 010669 290 RVWQGSEDGNYDCKHTLKD------HTAEVQAVTVHATNKYF-VTAS---LDNTWCFYDLSSGICLTQVSDA-GTD---- 354 (504)
Q Consensus 290 ~iwd~~~~~~~~~~~~~~~------h~~~v~~l~~~p~~~~l-~s~s---~dg~i~iwd~~~~~~~~~~~~~-~~~---- 354 (504)
.+||+.++ +.+..+.. +...+..+++++++..+ ++.. .++.|.+||+.+++....+... ...
T Consensus 96 ~~~d~~tg---~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 96 VAWDTLNN---QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEETTTT---EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred EEEECCCC---eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 99999875 33333322 22456899999865544 4444 5789999999988766544210 000
Q ss_pred -----C--------------CCCCeEEEEECCCCCEEEEEeCCC-cEEEEEcC---CCc-----eee--eeeCCCCCeEE
Q 010669 355 -----G--------------RPEGYTSAAFHPDGLILGTGTSEA-LVKIWDVK---SQA-----NVA--KFDGHVGAVTA 404 (504)
Q Consensus 355 -----~--------------~~~~v~~~~~~pdg~~l~~g~~dg-~I~iwd~~---~~~-----~~~--~~~~~~~~i~~ 404 (504)
+ ....+..++|+|||+.|+++..++ .|..++.. .+. ... ...++.+....
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 0 012468899999999888877665 55555532 111 011 11234456678
Q ss_pred EEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc
Q 010669 405 ISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463 (504)
Q Consensus 405 l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d 463 (504)
++++++|.++++...++ |.+||..+++....... .....+.+++|+++|.++++.+..
T Consensus 253 ia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-GGGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-CceecCCeeEECCCCcEEEEeCcc
Confidence 99999999888887777 99999855553222221 123468899999998877776543
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.35 E-value=2.5e-10 Score=108.59 Aligned_cols=223 Identities=16% Similarity=0.100 Sum_probs=148.7
Q ss_pred EcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEE
Q 010669 260 TLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338 (504)
Q Consensus 260 ~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd 338 (504)
.+...........|+++++ ++++...++.|..|+... . ...+..+...+.++.++++|+++++...++.|.+||
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----T-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----C-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----C-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 3333445577899999998 667777889999998732 2 234445567789999999999776666668999999
Q ss_pred CCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE----EeC-------------CCcEEEEEcCCCceeeeeeCCCCC
Q 010669 339 LSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT----GTS-------------EALVKIWDVKSQANVAKFDGHVGA 401 (504)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~----g~~-------------dg~I~iwd~~~~~~~~~~~~~~~~ 401 (504)
.. +......... .......+..++++++|+++++ |.. .+.|..||..+++..... ....
T Consensus 114 ~~-g~~~~~~~~~-~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 114 AD-GQAHLLVGRY-AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp TT-SCEEEEECEE-TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CC-CCEEEEEecc-CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 86 5433222110 1011234678999999998886 432 256888887666544333 3456
Q ss_pred eEEEEEcCCCcEEEEEeCC------c-EEEEEcCCCcc--eeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEEeec
Q 010669 402 VTAISFSENGYYLATAAHD------G-VKLWDLRKLKN--FRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVAS 471 (504)
Q Consensus 402 i~~l~~s~~g~~l~s~~~d------~-v~vwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~ 471 (504)
.+.++|+|+|..|+.+... + |.+||+..... ...+... .......++++++|++.++. .+ |.+|+.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~-- 265 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWLWSSS-GTGVCVFDS-- 265 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCEEECC-SSEEEEECT--
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCEEEec-CCcEEEECC--
Confidence 7889999999977777554 4 99999875431 1111111 13345679999999955544 55 777773
Q ss_pred cCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 472 VKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 472 ~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.++.+..+..+ . .+.+++|.++++
T Consensus 266 ---~g~~~~~~~~~--~-~~~~~~f~~d~~ 289 (305)
T 3dr2_A 266 ---DGQLLGHIPTP--G-TASNCTFDQAQQ 289 (305)
T ss_dssp ---TSCEEEEEECS--S-CCCEEEECTTSC
T ss_pred ---CCCEEEEEECC--C-ceeEEEEeCCCC
Confidence 46677777654 3 588888887775
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.30 E-value=2.5e-09 Score=102.66 Aligned_cols=216 Identities=11% Similarity=0.048 Sum_probs=140.9
Q ss_pred eeEEEEeeCC-CEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEE
Q 010669 268 VTSVKFVTEG-DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346 (504)
Q Consensus 268 v~~l~~s~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (504)
..+..|+|++ .++++...++.|..||..++ . ...+. ....+.++.|+++|+++++. . ..|.+||..+++...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG---R-KTVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT---E-EEEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC---c-EEEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEE
Confidence 4567899864 45666667889999998764 2 22222 34679999999999877754 3 459999998887543
Q ss_pred EeecCCCCCCCCCeEEEEECCCCCEEEEEeC------CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeC-
Q 010669 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTS------EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAH- 419 (504)
Q Consensus 347 ~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~------dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~- 419 (504)
..... .......+..++++|+|+++++... .+.|..+| +++. ..+..+......++|+|+|+.|+.+..
T Consensus 124 ~~~~~-~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELE-SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSS-TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EeeCC-CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECC
Confidence 32211 1111246889999999997765432 24566666 4443 233333346789999999987766654
Q ss_pred Cc-EEEEEcC--CC-cce--eeee-cCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCc
Q 010669 420 DG-VKLWDLR--KL-KNF--RSFE-SSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGA 490 (504)
Q Consensus 420 d~-v~vwd~~--~~-~~~--~~~~-~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~ 490 (504)
++ |.+||+. ++ ... ..+. .......+..++++++|.+.++...+ |.+|+. .++.+..+..+ ...
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-----~g~~~~~i~~~--~~~ 272 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-----DGNHIARYEVP--GKQ 272 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-----TCCEEEEEECS--CSB
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-----CCCEEEEEECC--CCC
Confidence 45 9999986 44 321 1221 11113456789999999877766443 777764 35566666654 557
Q ss_pred eeEEEEe-ecCc
Q 010669 491 ASFLFLF-VLGQ 501 (504)
Q Consensus 491 v~~l~~~-~~g~ 501 (504)
+++++|. +++.
T Consensus 273 ~~~~af~g~d~~ 284 (326)
T 2ghs_A 273 TTCPAFIGPDAS 284 (326)
T ss_dssp EEEEEEESTTSC
T ss_pred cEEEEEecCCCC
Confidence 8999998 7764
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.29 E-value=1.5e-10 Score=112.19 Aligned_cols=232 Identities=10% Similarity=-0.006 Sum_probs=151.4
Q ss_pred cEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEe----------CCCcEEEEeCCCCCCcceeEEeccC------
Q 010669 246 NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS----------ADKTVRVWQGSEDGNYDCKHTLKDH------ 309 (504)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~~h------ 309 (504)
.|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||..+. +.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~---~vv~~I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF---LPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC---CEEEEEEETTSCSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---CEEEEEECCCccccc
Confidence 8889999999999998755555 799999999888886 3689999999886 556665432
Q ss_pred -CcCeEEEEEccCCCEEEEEeC--CCeEEE--EECCCCeEEEEeecCCC-------------CCCCCCeEEEEE------
Q 010669 310 -TAEVQAVTVHATNKYFVTASL--DNTWCF--YDLSSGICLTQVSDAGT-------------DGRPEGYTSAAF------ 365 (504)
Q Consensus 310 -~~~v~~l~~~p~~~~l~s~s~--dg~i~i--wd~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~------ 365 (504)
......+.++|+|++++++.. +..+.+ +|..+ +..+...+. ......+..+..
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~ 198 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAA 198 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCC
T ss_pred cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcccccc
Confidence 123568899999999998875 457888 88866 222211000 000000000110
Q ss_pred --------------------CCCCCEEEEEeCCCcEEEEEcCCCc--eeeeeeC-------C---CCCeEEEEEcCCCcE
Q 010669 366 --------------------HPDGLILGTGTSEALVKIWDVKSQA--NVAKFDG-------H---VGAVTAISFSENGYY 413 (504)
Q Consensus 366 --------------------~pdg~~l~~g~~dg~I~iwd~~~~~--~~~~~~~-------~---~~~i~~l~~s~~g~~ 413 (504)
.+++..++..+. +.|.+.|+.... .+..+.- + ......+.|+|+|..
T Consensus 199 ~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ 277 (368)
T 1mda_H 199 AGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG 277 (368)
T ss_dssp CEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTE
T ss_pred CCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCE
Confidence 333333333334 777777875432 2222210 0 011222689999988
Q ss_pred EEEEeC----------CcEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCE-EEEEe--Cc-EEEEEeeccCccceeE
Q 010669 414 LATAAH----------DGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY-LAVAS--AD-IRVYQVASVKADWNCI 479 (504)
Q Consensus 414 l~s~~~----------d~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~-l~~~~--~d-i~vw~~~~~~~~~~~i 479 (504)
++.+.. +++.++|+.+.+.+..+... .....++|+|||++ +++.. .+ |.|+|+ .+++.+
T Consensus 278 lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~----~t~kvv 350 (368)
T 1mda_H 278 IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDA----ASDQDQ 350 (368)
T ss_dssp EEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEES----SSCEEE
T ss_pred EEEEeccccCcccccCCCEEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEEC----CCCcEE
Confidence 876532 24779999999998888764 36899999999984 44444 23 999998 889999
Q ss_pred EEccCCCCCCceeEEEE
Q 010669 480 KTFPDLSGTGAASFLFL 496 (504)
Q Consensus 480 ~~~~~h~~~~~v~~l~~ 496 (504)
.++... .....+.+
T Consensus 351 ~~I~vg---~~P~~i~~ 364 (368)
T 1mda_H 351 SSVELD---KGPESLSV 364 (368)
T ss_dssp EECCCC---SCCCEEEC
T ss_pred EEEECC---CCCCEEEe
Confidence 999864 33344444
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.29 E-value=2e-09 Score=106.73 Aligned_cols=224 Identities=13% Similarity=0.075 Sum_probs=142.4
Q ss_pred cceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC--eEEEEECCCCe
Q 010669 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN--TWCFYDLSSGI 343 (504)
Q Consensus 266 ~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg--~i~iwd~~~~~ 343 (504)
.....++|+++++++++...++.|++||..++ ........ ..... ++|+++++.+++++.++ .|.+||...+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g---~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN---KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT---EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC---EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 35789999999998777777899999999764 23222222 22233 99999999999988866 79999987665
Q ss_pred EEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeee----eeCCCCCe--EEEEEcCC-CcEEEE
Q 010669 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAK----FDGHVGAV--TAISFSEN-GYYLAT 416 (504)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~----~~~~~~~i--~~l~~s~~-g~~l~s 416 (504)
....+... .......+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|+ +.++++
T Consensus 206 ~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 206 APTRIGQL-GSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp CEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eeEEeeec-cchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 43333110 001235678899999544455577789999999987653322 22222222 39999995 555555
Q ss_pred EeCCc-EEEEEcCCCcceeeeecCC-------------CCCCeeEEEECCCCCEEEEEe-Cc--EEEEEeeccCccceeE
Q 010669 417 AAHDG-VKLWDLRKLKNFRSFESSD-------------SETPTNSVDFDHSGSYLAVAS-AD--IRVYQVASVKADWNCI 479 (504)
Q Consensus 417 ~~~d~-v~vwd~~~~~~~~~~~~~~-------------~~~~v~~i~~~~~g~~l~~~~-~d--i~vw~~~~~~~~~~~i 479 (504)
-..++ |+.||.... +..+.... .-.....++|+++|+++++-. .+ |+.|++ ..+. +
T Consensus 285 d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~----~~G~-v 357 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI----LDGY-V 357 (409)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET----TTTE-E
T ss_pred eCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC----CCCE-E
Confidence 44455 999987643 22222211 013478999999999666655 44 777775 2333 3
Q ss_pred EEccCCCC-------------CCceeEEEEeecCcc
Q 010669 480 KTFPDLSG-------------TGAASFLFLFVLGQT 502 (504)
Q Consensus 480 ~~~~~h~~-------------~~~v~~l~~~~~g~~ 502 (504)
.++-++.. -....++++.++|.+
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l 393 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY 393 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE
Confidence 33333200 135778888888764
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=2.6e-09 Score=104.17 Aligned_cols=222 Identities=10% Similarity=0.117 Sum_probs=150.8
Q ss_pred cCCCEEEE-EeCCCcEEEEcCCCC----ceEEEcc-------cCccceeEEEEeeCCCEEEEEeCC------CcEEEEeC
Q 010669 233 YSKDVIAT-GGVDTNAVLFDRPSG----QIVTTLS-------GHSKKVTSVKFVTEGDLFLTGSAD------KTVRVWQG 294 (504)
Q Consensus 233 ~~~~~l~s-g~~dg~i~vwd~~~~----~~~~~~~-------~h~~~v~~l~~s~~~~~l~s~s~d------g~i~iwd~ 294 (504)
.++++|++ |..++.|+|+|+.+. +...++. .....-..+...|+| +++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77776654 567889999998755 5666663 111245667788999 77776655 78999998
Q ss_pred CCCCCcceeEEeccC--C-cCeEEEEEccCCCEEEEEe-------------------CCCeEEEEECCCCeEEEEeecCC
Q 010669 295 SEDGNYDCKHTLKDH--T-AEVQAVTVHATNKYFVTAS-------------------LDNTWCFYDLSSGICLTQVSDAG 352 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h--~-~~v~~l~~~p~~~~l~s~s-------------------~dg~i~iwd~~~~~~~~~~~~~~ 352 (504)
.+. +.+.++... . ..-..+.|+|+++.+++.. .+.+|.+||+.+++.+..+...
T Consensus 172 ~T~---~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg- 247 (462)
T 2ece_A 172 YSF---EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG- 247 (462)
T ss_dssp TTC---CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC-
T ss_pred CCC---eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC-
Confidence 875 556665422 1 2234688899999888885 3689999999999887777531
Q ss_pred CCCCCCCeEEEEE--CCCCCEEEEEeC------CCcEEEEEcCCCce--eeee--eCC----------------CCCeEE
Q 010669 353 TDGRPEGYTSAAF--HPDGLILGTGTS------EALVKIWDVKSQAN--VAKF--DGH----------------VGAVTA 404 (504)
Q Consensus 353 ~~~~~~~v~~~~~--~pdg~~l~~g~~------dg~I~iwd~~~~~~--~~~~--~~~----------------~~~i~~ 404 (504)
........+.| +|+++++++++. ++.|.+|....++. ...+ ... ......
T Consensus 248 --~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 248 --EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp --TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred --CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 11123445555 999998888774 56887766544321 1111 110 245788
Q ss_pred EEEcCCCcEEEEEeCC-c-EEEEEcCC---CcceeeeecCCC------------CCCeeEEEECCCCCEEEEEe
Q 010669 405 ISFSENGYYLATAAHD-G-VKLWDLRK---LKNFRSFESSDS------------ETPTNSVDFDHSGSYLAVAS 461 (504)
Q Consensus 405 l~~s~~g~~l~s~~~d-~-v~vwd~~~---~~~~~~~~~~~~------------~~~v~~i~~~~~g~~l~~~~ 461 (504)
|.+|+||++|.++..+ + |.+||+.. .+.+..+..... ......+.++|||++|+++.
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999876 3 99999863 344444443210 11368899999999999998
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=2.5e-12 Score=125.91 Aligned_cols=203 Identities=16% Similarity=0.138 Sum_probs=117.5
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCc-C
Q 010669 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA-E 312 (504)
Q Consensus 234 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~-~ 312 (504)
++..+++++.||.|+.||..+|+.+..+.. +.+.+..+..++..+++++.||.|..||..++. .+..+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~---~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNE---GLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----C---CSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCc---eeeeeeccCccc
Confidence 578899999999999999999999888875 556666666677788888899999999997752 2222222211 1
Q ss_pred eE-EEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce
Q 010669 313 VQ-AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391 (504)
Q Consensus 313 v~-~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~ 391 (504)
+. +..+ ..+..+++++.|+.++.||..+|+....+... . ...++|++..+++++.|+.|+.||.++++.
T Consensus 83 ~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-----~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 83 VQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-----F----ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred cccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCC-----C----cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 10 0011 13557788888999999999999887666421 1 234566888899999999999999999987
Q ss_pred eeeeeCCCCCeEEEEEcCCC---cEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCee-EEEECCCCCE
Q 010669 392 VAKFDGHVGAVTAISFSENG---YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN-SVDFDHSGSY 456 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g---~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~-~i~~~~~g~~ 456 (504)
+..+..+. .....++.++ ..+++++.++ |+.||.++++.+..+... .++. ...++++|..
T Consensus 153 ~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~---~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 153 RWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA---SPVVAFYVWQREGLR 217 (369)
T ss_dssp CCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS---SCEEEEEECTTSSCE
T ss_pred EEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC---CceEEEEEecCCceE
Confidence 76654221 1223333332 4566677777 999999999987776643 3443 4456667653
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.20 E-value=1.2e-08 Score=99.44 Aligned_cols=224 Identities=11% Similarity=0.065 Sum_probs=148.2
Q ss_pred eCCCEEE-EEeCCCcEEEEeCCCC-CCcceeEEec-------cCCcCeEEEEEccCCCEEEEEeCC------CeEEEEEC
Q 010669 275 TEGDLFL-TGSADKTVRVWQGSED-GNYDCKHTLK-------DHTAEVQAVTVHATNKYFVTASLD------NTWCFYDL 339 (504)
Q Consensus 275 ~~~~~l~-s~s~dg~i~iwd~~~~-~~~~~~~~~~-------~h~~~v~~l~~~p~~~~l~s~s~d------g~i~iwd~ 339 (504)
.++++|+ .+..++.|.|+|+.+. ...+...++. .....-..+.+.|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6777655 5667889999998653 2234444442 111245667888999 77776555 78999999
Q ss_pred CCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-------------------CCCcEEEEEcCCCceeeeeeCC--
Q 010669 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-------------------SEALVKIWDVKSQANVAKFDGH-- 398 (504)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-------------------~dg~I~iwd~~~~~~~~~~~~~-- 398 (504)
.+++.+..+.... .....-..+.|+|+++.+++.. .+..|.+||+.+++.+.++...
T Consensus 172 ~T~~v~~~~~~~~--~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 172 YSFEPLGKWEIDR--GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTCCEEEECCSBC--TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCeEEEEEccCC--CCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999988886321 1112234688899999888874 3689999999998888777642
Q ss_pred CCCeEEEEE--cCCCcEEEEEeC-----C-c-EEEEEcCCCc--ceeeeecCC----------------CCCCeeEEEEC
Q 010669 399 VGAVTAISF--SENGYYLATAAH-----D-G-VKLWDLRKLK--NFRSFESSD----------------SETPTNSVDFD 451 (504)
Q Consensus 399 ~~~i~~l~~--s~~g~~l~s~~~-----d-~-v~vwd~~~~~--~~~~~~~~~----------------~~~~v~~i~~~ 451 (504)
......+.| +|+|+++++++. . + |.+|....+. ..+.+.... .......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 124556666 999999888876 4 3 7665544332 111111110 01357789999
Q ss_pred CCCCEEEEEeCc---EEEEEeeccCccceeEEEccCCC------------CCCceeEEEEeecCcc
Q 010669 452 HSGSYLAVASAD---IRVYQVASVKADWNCIKTFPDLS------------GTGAASFLFLFVLGQT 502 (504)
Q Consensus 452 ~~g~~l~~~~~d---i~vw~~~~~~~~~~~i~~~~~h~------------~~~~v~~l~~~~~g~~ 502 (504)
+||++|+++... |.+|++... .+.+.+..+.... ..+.-..+.++++|+.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 999999998765 999998532 3456666654320 0113578999999874
No 230
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.18 E-value=1e-11 Score=116.75 Aligned_cols=52 Identities=35% Similarity=0.625 Sum_probs=48.4
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCC-CCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGK-CPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~ 53 (504)
|.|+||+++|.+||++| |||+|||.+|++|+..++. ||+|+++|+..+|+|-
T Consensus 209 ~~c~i~~~~~~dPv~~~-~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n 261 (281)
T 2c2l_A 209 LCGKISFELMREPCITP-SGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPN 261 (281)
T ss_dssp TBCTTTCSBCSSEEECS-SCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEEC
T ss_pred cCCcCcCCHhcCCeECC-CCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCccc
Confidence 57999999999999997 9999999999999998775 9999999999998764
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.18 E-value=3.9e-09 Score=111.44 Aligned_cols=241 Identities=15% Similarity=0.140 Sum_probs=162.7
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceEEEcccC-c----cceeEEEEeeCCCEEEEEeC------CCcEEEEeCCCCCCcce
Q 010669 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGH-S----KKVTSVKFVTEGDLFLTGSA------DKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 234 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~----~~v~~l~~s~~~~~l~s~s~------dg~i~iwd~~~~~~~~~ 302 (504)
++..|++++.|+.|+.+|..+|+.+..+..+ . ..+.+--.. .+..++.++. +|.|..||..++. .
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~---~ 202 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGE---R 202 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCC---E
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCc---E
Confidence 3667888899999999999999998887654 1 122211111 2344555543 7899999998863 3
Q ss_pred eEEeccCC--------------------------------cCeEEEEEccCCCEEEEEeCCC------------------
Q 010669 303 KHTLKDHT--------------------------------AEVQAVTVHATNKYFVTASLDN------------------ 332 (504)
Q Consensus 303 ~~~~~~h~--------------------------------~~v~~l~~~p~~~~l~s~s~dg------------------ 332 (504)
+-.+.... .....++++|++..++.++.++
T Consensus 203 ~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~ 282 (677)
T 1kb0_A 203 KWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYL 282 (677)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeee
Confidence 33322111 1113577888889888887664
Q ss_pred -eEEEEECCCCeEEEEeecCCCCC----CCCCeEEEEECCCC---CEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----
Q 010669 333 -TWCFYDLSSGICLTQVSDAGTDG----RPEGYTSAAFHPDG---LILGTGTSEALVKIWDVKSQANVAKFDGHV----- 399 (504)
Q Consensus 333 -~i~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~pdg---~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~----- 399 (504)
.|..+|.++|+....+....... .......+....+| ..+++++.+|.|+++|..+++.+..+....
T Consensus 283 ~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 283 ASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 59999999999887776321110 01223334444577 689999999999999999999876654211
Q ss_pred -----C-Ce------------------------EEEEEcCCCcEEEEEeC------------------------------
Q 010669 400 -----G-AV------------------------TAISFSENGYYLATAAH------------------------------ 419 (504)
Q Consensus 400 -----~-~i------------------------~~l~~s~~g~~l~s~~~------------------------------ 419 (504)
+ ++ ..++|+|++.++++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 0 01 15688998877777532
Q ss_pred -------------Cc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEcc
Q 010669 420 -------------DG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483 (504)
Q Consensus 420 -------------d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~ 483 (504)
.+ |..||+.+++.+..+... .++....+...+..+++++.+ +++||. .+++.+.++.
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~----~tG~~lw~~~ 515 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHA----ATGEKLWEAP 515 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEET----TTCCEEEEEE
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEEC----CCCceeeeee
Confidence 15 999999999988777653 334455566778888888877 888997 6788888876
Q ss_pred CC
Q 010669 484 DL 485 (504)
Q Consensus 484 ~h 485 (504)
..
T Consensus 516 ~~ 517 (677)
T 1kb0_A 516 TG 517 (677)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=4.9e-09 Score=101.41 Aligned_cols=228 Identities=10% Similarity=-0.003 Sum_probs=144.2
Q ss_pred cceeEEEEeeCCCEEEEEe--CCCcEEEEeCCCCCCcceeEEe-------ccCCcCeEEEEEccCCCEEEEEeC-----C
Q 010669 266 KKVTSVKFVTEGDLFLTGS--ADKTVRVWQGSEDGNYDCKHTL-------KDHTAEVQAVTVHATNKYFVTASL-----D 331 (504)
Q Consensus 266 ~~v~~l~~s~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~-------~~h~~~v~~l~~~p~~~~l~s~s~-----d 331 (504)
..+..++++++|+++++.. .++.++||.+.+ + . +..+ ..|...+.+++++++++++++-.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~-g--~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ-D--G-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET-T--E-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC-C--C-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 5689999999999888864 234355665543 2 1 2222 234567999999999876665443 5
Q ss_pred CeEEEEECCCCeEEEEeecCC-CCCCCCCeEEEEECCCC-CEEEEEe---CCCcEEEEEcCCCceeeeeeCCC-------
Q 010669 332 NTWCFYDLSSGICLTQVSDAG-TDGRPEGYTSAAFHPDG-LILGTGT---SEALVKIWDVKSQANVAKFDGHV------- 399 (504)
Q Consensus 332 g~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~pdg-~~l~~g~---~dg~I~iwd~~~~~~~~~~~~~~------- 399 (504)
+.|.+||+.+++.+..+.... ...+...+..+++++++ ..+++.. .++.|.+||+.+++....+.+|.
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 789999999998776665321 11223456899999864 4455554 57899999998877655443321
Q ss_pred ----------------------CCeEEEEEcCCCcEEEEEeCCc--EEEEEcC---CCc-----ceeeeecCCCCCCeeE
Q 010669 400 ----------------------GAVTAISFSENGYYLATAAHDG--VKLWDLR---KLK-----NFRSFESSDSETPTNS 447 (504)
Q Consensus 400 ----------------------~~i~~l~~s~~g~~l~s~~~d~--v~vwd~~---~~~-----~~~~~~~~~~~~~v~~ 447 (504)
..+..|+|+|+|..|+.+...+ +..++.. .+. ....+...........
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 2368899999999888887665 6555532 111 0111111001235667
Q ss_pred EEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 448 VDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 448 i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
++++++|.++++...+ |.+|+. ..++...... ......+++++|.++|++
T Consensus 253 ia~d~~G~l~va~~~~~~V~~~d~----~~G~~~~~~~-~~~~~~p~~va~~~~g~l 304 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAHSAIGVITS----ADRAYKLLVT-DEKLSWTDSFNFGSDGYL 304 (343)
T ss_dssp EEECTTCCEEEEEGGGTEEEEEET----TTTEEEEEEE-CGGGSCEEEEEECTTSCE
T ss_pred EEECCCCCEEEEccCCCeEEEEEC----CCCCEEEEEE-CCceecCCeeEECCCCcE
Confidence 9999999888877655 888885 1233222221 111346788999888764
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=3e-09 Score=104.85 Aligned_cols=205 Identities=11% Similarity=0.067 Sum_probs=133.1
Q ss_pred EEEeccCCCEEEEEe----------CCCcEEEEcCCCCceEEEcccC-------ccceeEEEEeeCCCEEEEEeC--CCc
Q 010669 228 SLDIHYSKDVIATGG----------VDTNAVLFDRPSGQIVTTLSGH-------SKKVTSVKFVTEGDLFLTGSA--DKT 288 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~s~~~~~l~s~s~--dg~ 288 (504)
.+.++|||++++++. .++.|.++|..+++.+..+.-. ......+.|+|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999887775 4678999999999988877521 133567899999999998874 578
Q ss_pred EEEEeCCCCCCcceeEEeccCCc-------CeEEEEE-------------------------------------ccCCCE
Q 010669 289 VRVWQGSEDGNYDCKHTLKDHTA-------EVQAVTV-------------------------------------HATNKY 324 (504)
Q Consensus 289 i~iwd~~~~~~~~~~~~~~~h~~-------~v~~l~~-------------------------------------~p~~~~ 324 (504)
|.+.|..+. +.+..+..... .-..+.+ .+++..
T Consensus 202 VsVID~~t~---kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 202 VGVVDLEGK---TFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp EEEEETTTT---EEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred EEEEECCCC---eEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 999999875 33333332100 0001222 223333
Q ss_pred EEEEeCCCeEEEEECCCCeEEE--EeecCCCCC-----CCCCeEEEEECCCCCEEEEEeC----------CCcEEEEEcC
Q 010669 325 FVTASLDNTWCFYDLSSGICLT--QVSDAGTDG-----RPEGYTSAAFHPDGLILGTGTS----------EALVKIWDVK 387 (504)
Q Consensus 325 l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~~~-----~~~~v~~~~~~pdg~~l~~g~~----------dg~I~iwd~~ 387 (504)
++..+..+.+.+.|+..+.... .+....... .......++++|+++.+++... ++.|.++|+.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 3333334444455543332111 000000000 0111223789999887776542 3579999999
Q ss_pred CCceeeeeeCCCCCeEEEEEcCCCc-EEEEEeC-Cc-EEEEEcCCCcceeee
Q 010669 388 SQANVAKFDGHVGAVTAISFSENGY-YLATAAH-DG-VKLWDLRKLKNFRSF 436 (504)
Q Consensus 388 ~~~~~~~~~~~~~~i~~l~~s~~g~-~l~s~~~-d~-v~vwd~~~~~~~~~~ 436 (504)
+.+.+.++... .....+.|+|||+ ++++... ++ |.++|+.+++.+.++
T Consensus 359 T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 359 TGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999888632 2588999999998 8888874 55 999999999999887
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.14 E-value=9.3e-09 Score=108.78 Aligned_cols=256 Identities=14% Similarity=0.119 Sum_probs=164.5
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccC--ccceeEEEEee---CCCEEEEEe------CCCcEEEEeCCCCCCccee
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGH--SKKVTSVKFVT---EGDLFLTGS------ADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~~~v~~l~~s~---~~~~l~s~s------~dg~i~iwd~~~~~~~~~~ 303 (504)
+..+++++.|+.|+.+|..+|+.+..+... ......+..+| ++. ++.++ .+|.|..||..++. .+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~---~~ 196 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGK---EA 196 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCC---EE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCc---EE
Confidence 567888889999999999999988776542 11111111111 444 44443 37899999998863 33
Q ss_pred EEecc-------------------------------CCcCeEEEEEccCCCEEEEEeCCCe-------------------
Q 010669 304 HTLKD-------------------------------HTAEVQAVTVHATNKYFVTASLDNT------------------- 333 (504)
Q Consensus 304 ~~~~~-------------------------------h~~~v~~l~~~p~~~~l~s~s~dg~------------------- 333 (504)
-.+.. +......+.+.|++..++.++.++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 22211 0011125778888899999888764
Q ss_pred EEEEECCCCeEEEEeecCCCCC----CCCCeEEEEECCCCC---EEEEEeCCCcEEEEEcCCCceeeeeeCCC-------
Q 010669 334 WCFYDLSSGICLTQVSDAGTDG----RPEGYTSAAFHPDGL---ILGTGTSEALVKIWDVKSQANVAKFDGHV------- 399 (504)
Q Consensus 334 i~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~pdg~---~l~~g~~dg~I~iwd~~~~~~~~~~~~~~------- 399 (504)
|..||.++|+.+..+....... ............+|+ .++.++.+|.++++|.++++.+.......
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 9999999999888776321110 112222233333665 78899999999999999998874332100
Q ss_pred ---------------------C-----------CeEEEEEcCCCcEEEEEeC----------------------------
Q 010669 400 ---------------------G-----------AVTAISFSENGYYLATAAH---------------------------- 419 (504)
Q Consensus 400 ---------------------~-----------~i~~l~~s~~g~~l~s~~~---------------------------- 419 (504)
. .-..++|+|+..++++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0 0112688888777776521
Q ss_pred -----------------Cc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeE
Q 010669 420 -----------------DG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCI 479 (504)
Q Consensus 420 -----------------d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i 479 (504)
++ |+.||+.+++.+..+.... +...-.+...+.++++++.| ++.||. ++++.+
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagglvf~gt~dg~l~a~D~----~tG~~l 509 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT---IFNGGTLSTAGNLVFEGSADGRVIAYAA----DTGEKL 509 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEET----TTCCEE
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC---CccCccceECCCEEEEECCCCcEEEEEC----CCCccc
Confidence 25 9999999999887776542 23334566678899999888 999997 677887
Q ss_pred EEccCCCCCCceeEEEEeecCcc
Q 010669 480 KTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 480 ~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
-.+.... ....+-+.+..+|++
T Consensus 510 w~~~~~~-~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 510 WEQPAAS-GVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEEECSS-CCCSCCEEEEETTEE
T ss_pred eeeeCCC-CcccCceEEEECCEE
Confidence 7776431 112233555677653
No 235
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.13 E-value=4.8e-11 Score=88.13 Aligned_cols=52 Identities=27% Similarity=0.535 Sum_probs=47.4
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh-cCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILD-YGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+++.+||+++ +||+|+|.+|++|++. +.+||+++++++.++|++-
T Consensus 9 ~~C~IC~~~~~~Pv~~~-CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n 61 (78)
T 1t1h_A 9 FRCPISLELMKDPVIVS-TGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPN 61 (78)
T ss_dssp SSCTTTSCCCSSEEEET-TTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEEC
T ss_pred CCCCCccccccCCEEcC-CCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccC
Confidence 47999999999999996 9999999999999997 6789999999998887654
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=3.2e-07 Score=85.07 Aligned_cols=245 Identities=7% Similarity=-0.036 Sum_probs=148.4
Q ss_pred CEEEEEeCCCcEEEEcCCCCce-----EEEcccCccceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCCCcceeEEeccC
Q 010669 236 DVIATGGVDTNAVLFDRPSGQI-----VTTLSGHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDGNYDCKHTLKDH 309 (504)
Q Consensus 236 ~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~h 309 (504)
.+|+.+.. +.|+.+++..... ...+......+..++|++++..|+ +-..++.|..++..... ....+...
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~~~ 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE---PTTIIRQD 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CEEEECTT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC---cEEEEECC
Confidence 34444443 4688888765432 111222234578999998655544 55567899999987632 22222222
Q ss_pred CcCeEEEEEccCCCEEEEE-eCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC---CCcEEEEE
Q 010669 310 TAEVQAVTVHATNKYFVTA-SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS---EALVKIWD 385 (504)
Q Consensus 310 ~~~v~~l~~~p~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~---dg~I~iwd 385 (504)
......+++++++..++.+ ...+.|.++++.......... . .......++++|++..|+.+.. .+.|..++
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~----~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-T----GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-S----SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-C----CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 2467899999976555544 456799999987543222221 1 1135689999996555544443 46888888
Q ss_pred cCCCceeeeee-CCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeC
Q 010669 386 VKSQANVAKFD-GHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462 (504)
Q Consensus 386 ~~~~~~~~~~~-~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~ 462 (504)
+... ....+. ........+++++++..|+.+... + |.++|+........+.. ......++++ +..|+++..
T Consensus 153 ~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---~~~P~gi~~d--~~~lyva~~ 226 (267)
T 1npe_A 153 MDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG---LQYPFAVTSY--GKNLYYTDW 226 (267)
T ss_dssp TTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC---CCSEEEEEEE--TTEEEEEET
T ss_pred cCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC---CCCceEEEEe--CCEEEEEEC
Confidence 7543 222222 233468899999987777666655 4 99999975443333322 2345677764 556666654
Q ss_pred c---EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecC
Q 010669 463 D---IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLG 500 (504)
Q Consensus 463 d---i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g 500 (504)
. |.+++. .+++.+..+... ......++++.|++
T Consensus 227 ~~~~v~~~d~----~~g~~~~~i~~g-~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 227 KTNSVIAMDL----AISKEMDTFHPH-KQTRLYGITIALSQ 262 (267)
T ss_dssp TTTEEEEEET----TTTEEEEEECCS-SCCCCCCEEEECSC
T ss_pred CCCeEEEEeC----CCCCceEEEccc-cccccceeeecCcc
Confidence 3 766665 567778887643 12246788888775
No 237
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=3.8e-09 Score=112.25 Aligned_cols=193 Identities=13% Similarity=0.167 Sum_probs=125.6
Q ss_pred cCccceeEEEEeeCCCEEEEE-----eCCCcEEEEeCCCCCCcceeE-EeccCCcCeEEEEEccCCCEEEEEeCCCe---
Q 010669 263 GHSKKVTSVKFVTEGDLFLTG-----SADKTVRVWQGSEDGNYDCKH-TLKDHTAEVQAVTVHATNKYFVTASLDNT--- 333 (504)
Q Consensus 263 ~h~~~v~~l~~s~~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~l~~~p~~~~l~s~s~dg~--- 333 (504)
+|...+..++|||||++|+-+ +...+|++||+.++. .+. .+.. .....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~---~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ---PLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS---EEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC---CCccccCC--ceeccEEEe-CCCEEEEEEecCcccc
Confidence 355578899999999987743 333579999998863 222 1211 113567899 9999998887743
Q ss_pred ----------EEEEECCCCeE--EEEeecCCCCC-CCCCeEEEEECCCCCEEEEEeC----CCcEEEEEcCCCc-eeeee
Q 010669 334 ----------WCFYDLSSGIC--LTQVSDAGTDG-RPEGYTSAAFHPDGLILGTGTS----EALVKIWDVKSQA-NVAKF 395 (504)
Q Consensus 334 ----------i~iwd~~~~~~--~~~~~~~~~~~-~~~~v~~~~~~pdg~~l~~g~~----dg~I~iwd~~~~~-~~~~~ 395 (504)
|++|++.++.. ...+.. .. +...+..+.|+|||++|+.... ++.|+++|+.++. ....+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~---~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGA---IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESC---SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred cccccCCCcEEEEEECCCCcccceEEEec---CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 99999987653 222221 12 3345788999999998865432 3589999998764 44556
Q ss_pred eCCCCCeEEEEEcCCCcEE-EEEeCC---c-EEEEEcCCCcc--eeeeecCCCCCCeeEEEECCCCCEEEEEeCc-----
Q 010669 396 DGHVGAVTAISFSENGYYL-ATAAHD---G-VKLWDLRKLKN--FRSFESSDSETPTNSVDFDHSGSYLAVASAD----- 463 (504)
Q Consensus 396 ~~~~~~i~~l~~s~~g~~l-~s~~~d---~-v~vwd~~~~~~--~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d----- 463 (504)
..+....... |+++|..| +.+..+ . |..+|+.++.. ...+..+ ...+. .|++++++|+....+
T Consensus 277 ~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~--~~s~~g~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 277 QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE--RQQVL--TVHSGSGYLFAEYMVDATAR 351 (693)
T ss_dssp ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC--CSSCE--EEEEETTEEEEEEEETTEEE
T ss_pred eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC--CCCEE--EEEEECCEEEEEEEECCeeE
Confidence 5566555555 55555544 444433 3 99999987654 3344433 22333 889999988876543
Q ss_pred EEEEEe
Q 010669 464 IRVYQV 469 (504)
Q Consensus 464 i~vw~~ 469 (504)
|.+|++
T Consensus 352 l~~~d~ 357 (693)
T 3iuj_A 352 VEQFDY 357 (693)
T ss_dssp EEEECT
T ss_pred EEEEEC
Confidence 666665
No 238
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=2.8e-09 Score=103.29 Aligned_cols=217 Identities=11% Similarity=0.001 Sum_probs=137.3
Q ss_pred EEEeccCCCEEEEEe----------CCCcEEEEcCCCCceEEEcccC-------ccceeEEEEeeCCCEEEEEeC--CCc
Q 010669 228 SLDIHYSKDVIATGG----------VDTNAVLFDRPSGQIVTTLSGH-------SKKVTSVKFVTEGDLFLTGSA--DKT 288 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~s~~~~~l~s~s~--dg~ 288 (504)
.+.++||+++++++. .++.|.+||..+++.+.++..+ ......++|+|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 699999999888775 3688999999999999988643 124678999999999998875 457
Q ss_pred EEE--EeCCCCCCcceeEE------ecc---------CCcCeEEEEE--------------------------ccCCCEE
Q 010669 289 VRV--WQGSEDGNYDCKHT------LKD---------HTAEVQAVTV--------------------------HATNKYF 325 (504)
Q Consensus 289 i~i--wd~~~~~~~~~~~~------~~~---------h~~~v~~l~~--------------------------~p~~~~l 325 (504)
|.+ +|..+. ..+.. ... ..+.+..+.. .+++..+
T Consensus 149 v~V~~iD~~tv---~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~ 225 (368)
T 1mda_H 149 AGLSVPGASDD---QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML 225 (368)
T ss_dssp EEEEETTTEEE---EEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred EEEEEEchhhc---eEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEE
Confidence 888 887540 11100 000 0000000110 2233333
Q ss_pred EEEeCCCeEEEEECCCCe--EEEEeecCC-----CCCCCCCeEEEEECCCCCEEEEEeC---------CCcEEEEEcCCC
Q 010669 326 VTASLDNTWCFYDLSSGI--CLTQVSDAG-----TDGRPEGYTSAAFHPDGLILGTGTS---------EALVKIWDVKSQ 389 (504)
Q Consensus 326 ~s~s~dg~i~iwd~~~~~--~~~~~~~~~-----~~~~~~~v~~~~~~pdg~~l~~g~~---------dg~I~iwd~~~~ 389 (504)
+..+. +.+.+.|+.+.. .+..+.... ..........++++||++.++++.. ++.+.++|+.+.
T Consensus 226 ~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~ 304 (368)
T 1mda_H 226 VWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp EECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred EEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC
Confidence 44444 666666665432 111111000 0000112223789999988887543 235669999999
Q ss_pred ceeeeeeCCCCCeEEEEEcCCCc-EEEEEe-CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECC
Q 010669 390 ANVAKFDGHVGAVTAISFSENGY-YLATAA-HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDH 452 (504)
Q Consensus 390 ~~~~~~~~~~~~i~~l~~s~~g~-~l~s~~-~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~ 452 (504)
+.+..+.... ....+.|+|||+ .+++.. .++ |.++|+.+++.+.++... .....+++.+
T Consensus 305 ~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg---~~P~~i~~~~ 366 (368)
T 1mda_H 305 QTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD---KGPESLSVQN 366 (368)
T ss_dssp CEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC---SCCCEEECCC
T ss_pred eEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC---CCCCEEEeec
Confidence 9888886443 588999999997 455555 356 999999999999888764 4566677654
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.09 E-value=7.3e-09 Score=104.55 Aligned_cols=238 Identities=11% Similarity=0.082 Sum_probs=156.8
Q ss_pred cCCCEEEEEeC-CCcEEEEcCCCCceEEEccc-CccceeEEEE-e-eCCCEEEEEe------------------CCCcEE
Q 010669 233 YSKDVIATGGV-DTNAVLFDRPSGQIVTTLSG-HSKKVTSVKF-V-TEGDLFLTGS------------------ADKTVR 290 (504)
Q Consensus 233 ~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~-s-~~~~~l~s~s------------------~dg~i~ 290 (504)
+||++++.... ++.|.+.|+.+.++...+.- ....+..+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47887766554 56799999999998774432 2245788888 5 8999988884 345788
Q ss_pred EEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC--------------------------------------
Q 010669 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN-------------------------------------- 332 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg-------------------------------------- 332 (504)
++|..+. +...++.-- +.-..++++|+|+++++.+.+.
T Consensus 179 vID~~t~---~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKW---EVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTT---EEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCC---eEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 9998874 444444421 2346678899999998888553
Q ss_pred eEEEEECCC--CeE-EEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCc------------eeeeee
Q 010669 333 TWCFYDLSS--GIC-LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKSQA------------NVAKFD 396 (504)
Q Consensus 333 ~i~iwd~~~--~~~-~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~~~~~------------~~~~~~ 396 (504)
.|.+.|..+ ++. +..+.. .....++.++|||+++++++ .+..|.++|+.+.+ .+....
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv------g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI------ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE------ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred cEEEEeCcccCCceeEEEEec------CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 366677766 433 333321 12467899999999777655 67899999998653 223332
Q ss_pred CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCC----------CcceeeeecCCCCC---CeeEEEECCCCCEEEEEeC
Q 010669 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK----------LKNFRSFESSDSET---PTNSVDFDHSGSYLAVASA 462 (504)
Q Consensus 397 ~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~----------~~~~~~~~~~~~~~---~v~~i~~~~~g~~l~~~~~ 462 (504)
-......++|+++|...++.--++ |.+||+.+ .+.+.++..+...+ .-..+.++|||++|++...
T Consensus 329 -vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 329 -LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp -CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred -CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 234678999999994334444556 99999977 44556666542100 0122355899999999854
Q ss_pred ---c-E-----------EEEEeeccCccceeEEEcc
Q 010669 463 ---D-I-----------RVYQVASVKADWNCIKTFP 483 (504)
Q Consensus 463 ---d-i-----------~vw~~~~~~~~~~~i~~~~ 483 (504)
| + .++|+.. ...+.+...+
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~--~~m~lv~d~p 441 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISG--DKMVLVHDGP 441 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSS--SSCEEEEEEE
T ss_pred CCccccccCCCCCCCcceEEEcCC--CcEEEEEEEc
Confidence 4 5 8999822 3345555443
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=1.6e-08 Score=102.09 Aligned_cols=234 Identities=12% Similarity=0.093 Sum_probs=160.7
Q ss_pred EEEEeCCCcEEEEcCCCCceEEEccc---------------------------------C------ccceeEEEEee---
Q 010669 238 IATGGVDTNAVLFDRPSGQIVTTLSG---------------------------------H------SKKVTSVKFVT--- 275 (504)
Q Consensus 238 l~sg~~dg~i~vwd~~~~~~~~~~~~---------------------------------h------~~~v~~l~~s~--- 275 (504)
+.+|+..|.++|+-+.+++.+..+.- + .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 56788889999998888776665320 0 11223345554
Q ss_pred --CCCEEEEEeC-CCcEEEEeCCCCCCcceeEEecc-CCcCeEEEEE-c-cCCCEEEEEe------------------CC
Q 010669 276 --EGDLFLTGSA-DKTVRVWQGSEDGNYDCKHTLKD-HTAEVQAVTV-H-ATNKYFVTAS------------------LD 331 (504)
Q Consensus 276 --~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~l~~-~-p~~~~l~s~s------------------~d 331 (504)
||++++.+.. ++.|.+.|+.+. ++...+.- .......+++ + |++.++++++ .+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~---~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVM---KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTT---EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCc---eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 7887776654 557999999885 55553321 2345788887 5 8999999885 24
Q ss_pred CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCC--------------------------------
Q 010669 332 NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA-------------------------------- 379 (504)
Q Consensus 332 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg-------------------------------- 379 (504)
+.+.++|..+.+...++... + ....++++|||+++++.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vg---g---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVS---G---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp EEEEEEETTTTEEEEEEEES---S---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred ceEEEEECCCCeEEEEEEeC---C---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 57999999999888887632 1 245678999999998887553
Q ss_pred ------cEEEEEcCC--Cce-eeeeeCCCCCeEEEEEcCCCcEEEEEeCCc--EEEEEcCCCc------------ceeee
Q 010669 380 ------LVKIWDVKS--QAN-VAKFDGHVGAVTAISFSENGYYLATAAHDG--VKLWDLRKLK------------NFRSF 436 (504)
Q Consensus 380 ------~I~iwd~~~--~~~-~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~--v~vwd~~~~~------------~~~~~ 436 (504)
.|.|.|.++ ++. +..+.. .....++.++|||+++++++... |.++|+.+.+ ....+
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred CeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 367777776 444 334432 23567899999999999887663 9999999753 12222
Q ss_pred ecCCCCCCeeEEEECCCCCEEEEEeC-c--EEEEEeecc------CccceeEEEccCC
Q 010669 437 ESSDSETPTNSVDFDHSGSYLAVASA-D--IRVYQVASV------KADWNCIKTFPDL 485 (504)
Q Consensus 437 ~~~~~~~~v~~i~~~~~g~~l~~~~~-d--i~vw~~~~~------~~~~~~i~~~~~h 485 (504)
.. ......++|+++| ++++... + +.+|++... .+....+.++..|
T Consensus 328 ~v---G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 328 EL---GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp BC---CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred CC---CCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 22 4578899999999 6666543 3 999998552 1236778888776
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=4.7e-08 Score=89.62 Aligned_cols=198 Identities=5% Similarity=-0.027 Sum_probs=136.2
Q ss_pred CeEEEEeccCCCEEEEEeC--CCcEEEEcCCCCceEEEcccCcc-ceeEEEEeeCCCEE-EEEeCCCcEEEEeCCCCCCc
Q 010669 225 GIVSLDIHYSKDVIATGGV--DTNAVLFDRPSGQIVTTLSGHSK-KVTSVKFVTEGDLF-LTGSADKTVRVWQGSEDGNY 300 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~s~~~~~l-~s~s~dg~i~iwd~~~~~~~ 300 (504)
....+.|++++.++++.+. ++.|.++|+.+++.+..+.-... ....+++. ++.| ++.-.++.+.++|..+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~--- 96 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL--- 96 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT---
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC---
Confidence 4578999998765555543 57999999999999888752221 22345553 5444 44556889999999875
Q ss_pred ceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCc
Q 010669 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380 (504)
Q Consensus 301 ~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~ 380 (504)
+.+.++...... ...++++|+.++++..++.|.++|..+.+....+........-..++.+.|. +|.+++....++.
T Consensus 97 ~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 97 SNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred cEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 555655422122 2334567887777777899999999999888777632110111236678888 7876666667899
Q ss_pred EEEEEcCCCceeeeeeCC-------------CCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCC
Q 010669 381 VKIWDVKSQANVAKFDGH-------------VGAVTAISFSENGYYLATAAHD-G-VKLWDLRKL 430 (504)
Q Consensus 381 I~iwd~~~~~~~~~~~~~-------------~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~ 430 (504)
|.+.|..+++.+..+... ....+.|+|+|++..|++++.. . |.+.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999999999988887531 1356899999998766666654 4 888887654
No 242
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=99.06 E-value=5.9e-11 Score=105.32 Aligned_cols=53 Identities=25% Similarity=0.543 Sum_probs=47.9
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC--CCCC--CCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG--KCPV--TGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~--~~~~~~~~~~~~~ 53 (504)
|.|+||++++++||++.+|||+|||.+|++|++++| +||+ |+++++..+|++=
T Consensus 182 l~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN 238 (267)
T 3htk_C 182 LTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRD 238 (267)
T ss_dssp SBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEEC
T ss_pred eECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcC
Confidence 579999999999999877999999999999999875 5999 5699999999764
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=6.7e-08 Score=87.53 Aligned_cols=197 Identities=11% Similarity=0.129 Sum_probs=136.9
Q ss_pred ceEEEcccCccc--eeEEEEeeCCCEEEEEeCCC--cEEEEeCCCCCCcceeEEeccCCcCe--EEEEEccCCCEEEEEe
Q 010669 256 QIVTTLSGHSKK--VTSVKFVTEGDLFLTGSADK--TVRVWQGSEDGNYDCKHTLKDHTAEV--QAVTVHATNKYFVTAS 329 (504)
Q Consensus 256 ~~~~~~~~h~~~--v~~l~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v--~~l~~~p~~~~l~s~s 329 (504)
+.+.++. |... ...+.|+ ++.++.+++.+| .|+++|+.++ +....+... ... ..+.+ +++.|....
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg---kv~~~~~l~-~~~FgeGit~--~g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG---KTLQQIELG-KRYFGEGISD--WKDKIVGLT 103 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC---CEEEEEECC-TTCCEEEEEE--ETTEEEEEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCC---cEEEEEecC-CccceeEEEE--eCCEEEEEE
Confidence 4556664 4433 4678888 677777777766 8999999986 444444322 223 33444 455555554
Q ss_pred -CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----CCeE
Q 010669 330 -LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV-----GAVT 403 (504)
Q Consensus 330 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-----~~i~ 403 (504)
.++.+.+||..+.+.+..+... + ....+.+|+..|+.+..++.|.++|..+.+.+.++.... ..++
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~---~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYD---G-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECS---S-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred eeCCEEEEEECccCcEEEEEECC---C-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 5889999999999999988742 1 112233567777776667889999999998877765321 3456
Q ss_pred EEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC----------CCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 404 AISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD----------SETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 404 ~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~----------~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
.+.|. +|...+..-.+. |.+.|..+++.+..+.... .....+.|+|+|+++.|++.+.. =++|.+
T Consensus 176 ELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 176 ELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp EEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred eeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 67886 776554444445 9999999999988887631 12356899999999999999988 777776
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.04 E-value=1.2e-07 Score=86.81 Aligned_cols=200 Identities=12% Similarity=0.107 Sum_probs=135.2
Q ss_pred ceEEEcccCcc--ceeEEEEeeCCCEEEEEeC--CCcEEEEeCCCCCCcceeEEecc-CCcCeEEEEEccCCCEEEEE-e
Q 010669 256 QIVTTLSGHSK--KVTSVKFVTEGDLFLTGSA--DKTVRVWQGSEDGNYDCKHTLKD-HTAEVQAVTVHATNKYFVTA-S 329 (504)
Q Consensus 256 ~~~~~~~~h~~--~v~~l~~s~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~l~s~-s 329 (504)
+.+.++. |.. ....+.|++++.++++.+. ++.|.++|..++ +.+..+.. .......+++. ++.++.+ -
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg---~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG---KVENIHKMDDSYFGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC---CEEEEEECCTTCCEEEEEEE--TTEEEEEET
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC---CEEEEEecCCCcceEEEEEe--CCEEEEEEe
Confidence 4556664 443 3579999988755555543 579999999986 44444431 11223455555 4455444 4
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----CCeEE
Q 010669 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV-----GAVTA 404 (504)
Q Consensus 330 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-----~~i~~ 404 (504)
.++.+.++|..+.+.+..+... .+ . ...+++||+.++++..++.|.++|..+.+.+..+.-.. ..++.
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g--~~--~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ--MK--D---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC--SS--S---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred cCCEEEEEECCCCcEEEEEECC--CC--C---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 5789999999999998887532 01 1 13355577777777778999999999988877765321 24678
Q ss_pred EEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC-----------CCCCeeEEEECCCCCEEEEEeCc---EEEEEe
Q 010669 405 ISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD-----------SETPTNSVDFDHSGSYLAVASAD---IRVYQV 469 (504)
Q Consensus 405 l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~-----------~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~ 469 (504)
+.|. +|...+....++ |.+.|..+++.+..+.... .....+.++|+|+++.+++++.. +.+.++
T Consensus 157 le~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp EEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 8888 775444443445 9999999999988887531 12356899999999888877765 555555
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.03 E-value=7.7e-09 Score=98.97 Aligned_cols=245 Identities=14% Similarity=0.043 Sum_probs=148.3
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
.+.++...+++. |..++.+ |..||. +++.+..+...........+. +..+..++.++.|..+|.. + ....
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g---~~~~ 130 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-G---TEKW 130 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-S---CEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-C---CEEE
Confidence 346666666665 4444444 888886 565544443333223333333 4567778888999999987 3 3333
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iw 384 (504)
....+...+.++...+++. +..++.++.|..||.. ++....... ....+.++.+.++|.+++. + +.|..|
T Consensus 131 ~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-----~~~~~~~~~~d~~g~l~v~-t--~~l~~~ 200 (330)
T 3hxj_A 131 RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT-----NDAITSAASIGKDGTIYFG-S--DKVYAI 200 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC-----SSCCCSCCEECTTCCEEEE-S--SSEEEE
T ss_pred EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec-----CCCceeeeEEcCCCEEEEE-e--CEEEEE
Confidence 3344444556666666665 6667888999999998 776655542 1234667778888876554 4 789999
Q ss_pred EcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-
Q 010669 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD- 463 (504)
Q Consensus 385 d~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d- 463 (504)
| .+++.+..+......+.++.+.++|.+.+....++|..+|. ++..+..+... ...+..+.+++++.+. +++.+
T Consensus 201 d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~g~l~-v~t~~g 275 (330)
T 3hxj_A 201 N-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTG--KRIESSPVIGNTDTIY-FGSYDG 275 (330)
T ss_dssp C-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECS--SCCCSCCEECTTSCEE-EECTTC
T ss_pred C-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCC--CCccccceEcCCCeEE-EecCCC
Confidence 9 77777766665556788889988886655444445888874 55555555443 2334456667666544 45555
Q ss_pred -EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 464 -IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 464 -i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
+..++. +++.+..+... ...+.++.+..+|.
T Consensus 276 gl~~~d~-----~g~~~~~~~~~--~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 276 HLYAINP-----DGTEKWNFETG--SWIIATPVIDENGT 307 (330)
T ss_dssp EEEEECT-----TSCEEEEEECS--SCCCSCCEECTTCC
T ss_pred CEEEECC-----CCcEEEEEEcC--CccccceEEcCCCE
Confidence 555552 34444444332 34455555545554
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=6.6e-11 Score=115.77 Aligned_cols=186 Identities=15% Similarity=0.101 Sum_probs=99.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCC
Q 010669 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355 (504)
Q Consensus 276 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 355 (504)
++..+++++.||.|..||..++ +....+.. +.+.+..+..++..+++++.||.|+.||..+++.+......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG---~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~---- 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG---SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT---- 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC---CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCC---CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc----
Confidence 5778999999999999999886 44444443 44555555567778888889999999999988776554311
Q ss_pred CCCCeE-EEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcce
Q 010669 356 RPEGYT-SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNF 433 (504)
Q Consensus 356 ~~~~v~-~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~ 433 (504)
....+. +..+. ++..+++|+.+|.|+.||.++|+.+..+..+. ...++|++..+++++.++ |+.||.++++.+
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 000010 00111 34567788889999999999999887776543 234567888888888887 999999999877
Q ss_pred eeeecCCCCCCeeEEEECCCC---CEEEEEeCc--EEEEEeeccCccceeEEEcc
Q 010669 434 RSFESSDSETPTNSVDFDHSG---SYLAVASAD--IRVYQVASVKADWNCIKTFP 483 (504)
Q Consensus 434 ~~~~~~~~~~~v~~i~~~~~g---~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~ 483 (504)
..+.... .....++.+. ..+++++.+ +..||. .+++.+-.+.
T Consensus 154 W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~----~tG~~~W~~~ 200 (369)
T 2hz6_A 154 WNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDS----ESGDVLWIQN 200 (369)
T ss_dssp CEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECT----TTCCEEEEEE
T ss_pred EeEeccc----ccCccccCCccccceEEEECCCCEEEEEEC----CCCcEEEEec
Confidence 6665321 1223344432 445566666 778887 3444444443
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.00 E-value=7.4e-07 Score=82.54 Aligned_cols=219 Identities=11% Similarity=0.031 Sum_probs=140.0
Q ss_pred CeEEEEeccCCCEE-EEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEE-EEEeCCCcEEEEeCCCCCCcce
Q 010669 225 GIVSLDIHYSKDVI-ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF-LTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 225 ~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
.+..++|++++..| ++-..++.|.+++...+.....+.........+++++++..| ++-...+.|.+++..... .
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---R 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---C
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---E
Confidence 46789999976555 455567899999987655443333333567899999865544 455567889999986531 1
Q ss_pred eEEeccCCcCeEEEEEccCCCEEEEEeC---CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE-EEEeCC
Q 010669 303 KHTLKDHTAEVQAVTVHATNKYFVTASL---DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL-GTGTSE 378 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p~~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l-~~g~~d 378 (504)
.............++++|++..|+.+.. .+.|..+++..... ..+.. ........+++++++..| ++-...
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~----~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQ----DNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEEC----TTCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEE----CCCCCCcEEEEcCCCCEEEEEECCC
Confidence 1112222245789999997666665554 36888888865432 22221 112357889999976655 455566
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~ 455 (504)
+.|.++|+........+.+ ......+++. +..|+.+..+ + |.++|..+++.+..+.... ......+++.|++.
T Consensus 189 ~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 189 HRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK-QTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS-CCCCCCEEEECSCC
T ss_pred CEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc-ccccceeeecCccC
Confidence 8999999975443333332 2345677764 4455555543 4 9999999998888876432 12467788888764
No 248
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=98.99 E-value=1.8e-10 Score=120.34 Aligned_cols=52 Identities=19% Similarity=0.403 Sum_probs=48.7
Q ss_pred CccccCCCCCCCceEeCCCC-eeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSG-LLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
|.|+||+++|+|||+.| || ++|||..|++|+..+++||+|+++|+.++|||-
T Consensus 892 F~cPIs~~lM~DPVilp-sG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~liPN 944 (968)
T 3m62_A 892 FLDPLMYTIMKDPVILP-ASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPN 944 (968)
T ss_dssp GBCTTTCSBCSSEEECT-TTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEEC
T ss_pred hCCcchhhHHhCCeEcC-CCCEEECHHHHHHHHhcCCCCCCCCCCCCccccccc
Confidence 57999999999999998 65 799999999999999999999999999999876
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.97 E-value=5.6e-08 Score=102.58 Aligned_cols=220 Identities=12% Similarity=0.173 Sum_probs=148.6
Q ss_pred CCEEEEEeC------CCcEEEEcCCCCceEEEcccCccc--------------------------------eeEEEEeeC
Q 010669 235 KDVIATGGV------DTNAVLFDRPSGQIVTTLSGHSKK--------------------------------VTSVKFVTE 276 (504)
Q Consensus 235 ~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~h~~~--------------------------------v~~l~~s~~ 276 (504)
+..+++++. +|.|+.||..+|+.+..+...... ...++++++
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 345555543 689999999999988776532111 135678888
Q ss_pred CCEEEEEeCCC-------------------cEEEEeCCCCCCcceeEEec--cCC-------cCeEEEEEccCC---CEE
Q 010669 277 GDLFLTGSADK-------------------TVRVWQGSEDGNYDCKHTLK--DHT-------AEVQAVTVHATN---KYF 325 (504)
Q Consensus 277 ~~~l~s~s~dg-------------------~i~iwd~~~~~~~~~~~~~~--~h~-------~~v~~l~~~p~~---~~l 325 (504)
+..++.+..++ .|..+|..++ +..-.++ .|. .....+....+| ..+
T Consensus 254 ~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG---~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l 330 (677)
T 1kb0_A 254 LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG---KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVI 330 (677)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC---CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEE
T ss_pred CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCC---CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEE
Confidence 88888887664 4899999886 3333332 221 122233334467 689
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeecCCCC------CCCC------------------------CeEEEEECCCCCEEEEE
Q 010669 326 VTASLDNTWCFYDLSSGICLTQVSDAGTD------GRPE------------------------GYTSAAFHPDGLILGTG 375 (504)
Q Consensus 326 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~------------------------~v~~~~~~pdg~~l~~g 375 (504)
+.++.+|.++++|..+|+.+..+...... .... .-..++++|++.++++.
T Consensus 331 ~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~ 410 (677)
T 1kb0_A 331 LHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLP 410 (677)
T ss_dssp EECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEE
T ss_pred EEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEe
Confidence 99999999999999999988766522100 0000 01257889988888775
Q ss_pred eC-------------------------------------------CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCc
Q 010669 376 TS-------------------------------------------EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412 (504)
Q Consensus 376 ~~-------------------------------------------dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~ 412 (504)
.. .|.|..||+.+++.+-.+. +..++....+...+.
T Consensus 411 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 411 AQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGN 489 (677)
T ss_dssp EEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTT
T ss_pred ChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCC
Confidence 43 2789999999999887776 334445555666777
Q ss_pred EEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEE
Q 010669 413 YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAV 459 (504)
Q Consensus 413 ~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~ 459 (504)
+++.++.++ +++||.++++.+..+.... .....-+.|..+|+ |+++
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~~-~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEKLWEAPTGT-GVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEE
T ss_pred EEEEECCCCcEEEEECCCCceeeeeeCCC-CcccCCEEEEeCCEEEEEE
Confidence 888888888 9999999999999887653 22334466667775 4444
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=5.3e-08 Score=93.08 Aligned_cols=213 Identities=11% Similarity=0.073 Sum_probs=143.7
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeE
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 314 (504)
+..+..++.++.|..+|.. ++....+..+...+.++...+++. +..++.++.|..||.. + .....+......+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g---~~~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G---TEKWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S---CEEEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C---CEeEEEecCCCcee
Confidence 5567778888999999988 777766665555567777766665 6667788999999987 3 33334444445566
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeee
Q 010669 315 AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAK 394 (504)
Q Consensus 315 ~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~ 394 (504)
++...+++..++ ++ +.+..|| .+++....... ....+.++...++|.+ .+++.++.|..+|. +++.+..
T Consensus 181 ~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~-----~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~ 249 (330)
T 3hxj_A 181 AASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYA-----GYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWR 249 (330)
T ss_dssp CCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECC-----SSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEE
T ss_pred eeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEcc-----CCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEE
Confidence 777776776444 44 8899999 67766655542 2245778888888865 44566788888874 5666666
Q ss_pred eeCCCCCeEEEEEcCCCcEEEEEeCC-cEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEe
Q 010669 395 FDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469 (504)
Q Consensus 395 ~~~~~~~i~~l~~s~~g~~l~s~~~d-~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~ 469 (504)
+......+..+.+.++|. |..++.+ +|..+|. +++....+... ...+.++..+++|.+.+ ++.+ +++...
T Consensus 250 ~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~--~~~~~~~~~d~~g~l~~-gt~~G~~~~~~~ 322 (330)
T 3hxj_A 250 FKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETG--SWIIATPVIDENGTIYF-GTRNGKFYALFN 322 (330)
T ss_dssp EECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECS--SCCCSCCEECTTCCEEE-ECTTSCEEEEEC
T ss_pred eeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcC--CccccceEEcCCCEEEE-EcCCCeEEEEec
Confidence 654444455566766665 4556666 4999995 67666666543 45677788888887655 5555 655553
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.96 E-value=8.6e-07 Score=84.62 Aligned_cols=231 Identities=10% Similarity=0.046 Sum_probs=144.3
Q ss_pred eEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEccc--------------------CccceeEEEEee-CCCEEEEEe
Q 010669 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG--------------------HSKKVTSVKFVT-EGDLFLTGS 284 (504)
Q Consensus 226 I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--------------------h~~~v~~l~~s~-~~~~l~s~s 284 (504)
..+++|++++++++++..++.|..|+..++... .+.. ....+..+++.+ +++ |+.+.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 457889999997888888999999998765432 2210 113578899987 565 55554
Q ss_pred CCCcEEEEeCCCCCCcceeEE-ecc-CCcCeEEEEEcc-CCCEEEEEeC-----------------CCeEEEEECCCCeE
Q 010669 285 ADKTVRVWQGSEDGNYDCKHT-LKD-HTAEVQAVTVHA-TNKYFVTASL-----------------DNTWCFYDLSSGIC 344 (504)
Q Consensus 285 ~dg~i~iwd~~~~~~~~~~~~-~~~-h~~~v~~l~~~p-~~~~l~s~s~-----------------dg~i~iwd~~~~~~ 344 (504)
..+.|..+|..++. ...+.. ..+ .......+++.+ +|+.+++-.. ++.|..||..+++.
T Consensus 99 ~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 44558888876421 111111 111 113478899999 8987766432 36799999887764
Q ss_pred EEEeecCCCCCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeC--
Q 010669 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTG-TSEALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAH-- 419 (504)
Q Consensus 345 ~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g-~~dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~-- 419 (504)
...... ......++++|+|+.|+++ +.++.|.+|++.... ....+....+ ...+++.++|.+.++...
T Consensus 178 ~~~~~~------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 178 TLLLKE------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEEEEE------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEET
T ss_pred EEeccC------CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcc
Confidence 433221 1235679999999866555 566899999987421 1122221223 788999999987776654
Q ss_pred --------Cc-EEEEEcCCCcceeeeecCCC--CCCeeEEEECCCCCEEEEEeC-c--EEEEEe
Q 010669 420 --------DG-VKLWDLRKLKNFRSFESSDS--ETPTNSVDFDHSGSYLAVASA-D--IRVYQV 469 (504)
Q Consensus 420 --------d~-v~vwd~~~~~~~~~~~~~~~--~~~v~~i~~~~~g~~l~~~~~-d--i~vw~~ 469 (504)
.+ |..+|.. ++.+..+..... ...+..+++. ++ .|++++. + |.++++
T Consensus 251 ~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DG-LLYIGTLFHGSVGILVY 311 (322)
T ss_dssp TSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TT-EEEEECSSCSEEEEEEC
T ss_pred cccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CC-EEEEeecCCCceEEEec
Confidence 34 8888864 666666654421 2346667663 44 4555533 3 777776
No 252
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.95 E-value=4.2e-07 Score=88.81 Aligned_cols=233 Identities=11% Similarity=0.069 Sum_probs=143.0
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCe
Q 010669 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEV 313 (504)
Q Consensus 234 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 313 (504)
++..+++++.++.|..+|..+|+.+..+............ .+..++.++.++.|..+|..++ +............
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG---~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADG---AVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTC---CEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCC---cEEEEEeCCCCce
Confidence 4567788888999999999999987766543322222222 2457888889999999999876 3333332211110
Q ss_pred -----EEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCC--CCeEEEEECC--CCCEEEEEeCCCcEEEE
Q 010669 314 -----QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP--EGYTSAAFHP--DGLILGTGTSEALVKIW 384 (504)
Q Consensus 314 -----~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p--dg~~l~~g~~dg~I~iw 384 (504)
..... .+..++.++.++.+..+|..+++...........+.. ..+..+...| .+..+++++.+|.+..+
T Consensus 177 ~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 177 SLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp --CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred eecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 11111 2457888888999999999999887766532110000 0000011112 34567777889999999
Q ss_pred EcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc
Q 010669 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463 (504)
Q Consensus 385 d~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d 463 (504)
|.++++.+..... .....+.. ++..++.++.++ |..+|..+++......... ...+..... .+..|++++.+
T Consensus 255 d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~--~~~~l~v~~~~ 327 (376)
T 3q7m_A 255 DLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLL-HRLLTSPVL--YNGNLVVGDSE 327 (376)
T ss_dssp ETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTT-TSCCCCCEE--ETTEEEEECTT
T ss_pred ECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccC-CCcccCCEE--ECCEEEEEeCC
Confidence 9999988766542 23445544 355666677776 9999999998776655221 112222222 25677777776
Q ss_pred --EEEEEeeccCccceeEEEccC
Q 010669 464 --IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 464 --i~vw~~~~~~~~~~~i~~~~~ 484 (504)
+.++|. .+++.+..+..
T Consensus 328 g~l~~~d~----~tG~~~~~~~~ 346 (376)
T 3q7m_A 328 GYLHWINV----EDGRFVAQQKV 346 (376)
T ss_dssp SEEEEEET----TTCCEEEEEEC
T ss_pred CeEEEEEC----CCCcEEEEEec
Confidence 777776 45555555543
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.94 E-value=3.2e-07 Score=83.11 Aligned_cols=199 Identities=11% Similarity=0.085 Sum_probs=135.6
Q ss_pred ceEEEcccCccc--eeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCe
Q 010669 256 QIVTTLSGHSKK--VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT 333 (504)
Q Consensus 256 ~~~~~~~~h~~~--v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~ 333 (504)
+.+.++. |... ...+.|+ ++.++++.+.+|.|+++|+.++. .+..+......-..+++.. +..++..-.++.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk---v~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQ---PVWMERLGNIFAEGLASDG-ERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSS---CSEEEECTTCCEEEEEECS-SCEEEEESSSCE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCc---EEeEECCCCcceeEEEEeC-CEEEEEEccCCE
Confidence 4555664 4332 3678886 46677788888999999999874 3333311111223455542 334444456889
Q ss_pred EEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----CCeEEEEEc
Q 010669 334 WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV-----GAVTAISFS 408 (504)
Q Consensus 334 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-----~~i~~l~~s 408 (504)
+.+||..+.+.+..+... +. -..++ +|+..|+.+..++.|.++|..+.+.+.++.... ..++.+.|.
T Consensus 118 v~V~D~~Tl~~~~ti~~~---~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS---GE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp EEEEETTTTEEEEEEECS---SC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECCcCcEEEEEeCC---Cc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 999999999999988742 11 12333 567778877779999999999998887765321 245778887
Q ss_pred CCCcEEEEEeCCc-EEEEEcCCCcceeeeecC-----------CCCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 409 ENGYYLATAAHDG-VKLWDLRKLKNFRSFESS-----------DSETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 409 ~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~-----------~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
+|...+...... |.+.|..+++.+..+... ......+.|+|+|+++.|++.+.. =++|.+
T Consensus 190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 776554443444 999999999988887753 112467899999998888888877 677765
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=2.1e-07 Score=84.30 Aligned_cols=188 Identities=12% Similarity=0.071 Sum_probs=130.7
Q ss_pred CCCeEEEEeccCCCEEEEEeCCC--cEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEE-eCCCcEEEEeCCCCCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDT--NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTG-SADKTVRVWQGSEDGN 299 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-s~dg~i~iwd~~~~~~ 299 (504)
..-...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ........++++.|... -.++.+.+||..+.
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~-- 117 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL-- 117 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTC--
T ss_pred CcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccC--
Confidence 3445778888 677777777766 89999999999988876433 34443333445555544 46889999999876
Q ss_pred cceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCC-CCeEEEEECCCCCEEEEEeCC
Q 010669 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP-EGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 300 ~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~pdg~~l~~g~~d 378 (504)
+.+.++.... .=..++ ++++.|+.+..++.|.++|..+.+....+..... +.. ..++.+.|. +|.+++..-.+
T Consensus 118 -~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~-g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 118 -RQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAH-GEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp -CEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEET-TEECCCEEEEEEE-TTEEEEEETTS
T ss_pred -cEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccC-CccccccceeEEE-CCEEEEEEccC
Confidence 5566665322 223343 5677777776688899999999988887763211 111 334567776 78777766678
Q ss_pred CcEEEEEcCCCceeeeeeCC------------CCCeEEEEEcCCCcEEEEEeCC
Q 010669 379 ALVKIWDVKSQANVAKFDGH------------VGAVTAISFSENGYYLATAAHD 420 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~------------~~~i~~l~~s~~g~~l~s~~~d 420 (504)
+.|.+.|.++++.+..+... ....+.|+|+|++..|++.+..
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 89999999999988777531 1356899999988877777755
No 255
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.94 E-value=1.1e-07 Score=100.60 Aligned_cols=212 Identities=11% Similarity=0.158 Sum_probs=142.3
Q ss_pred CCcEEEEcCCCCceEEEcccCc-------------------------------cceeEEEEeeCCCEEEEEeCCCc----
Q 010669 244 DTNAVLFDRPSGQIVTTLSGHS-------------------------------KKVTSVKFVTEGDLFLTGSADKT---- 288 (504)
Q Consensus 244 dg~i~vwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~s~~~~~l~s~s~dg~---- 288 (504)
+|.|+.||..+|+.+..+.... .....++++|++.+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 6899999999999887664210 01125778888888888887764
Q ss_pred ---------------EEEEeCCCCCCcceeEEecc--CC-------cCeEEEEEccCCC---EEEEEeCCCeEEEEECCC
Q 010669 289 ---------------VRVWQGSEDGNYDCKHTLKD--HT-------AEVQAVTVHATNK---YFVTASLDNTWCFYDLSS 341 (504)
Q Consensus 289 ---------------i~iwd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~p~~~---~l~s~s~dg~i~iwd~~~ 341 (504)
|..||..++ +.+-.++. |. .++.......+|+ .++.++.+|.++++|.++
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG---~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 338 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTG---EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT 338 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTC---CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred CCCCCCCCCceeeeeEEEEEccCC---ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC
Confidence 999999886 33333332 21 2222223333564 788999999999999999
Q ss_pred CeEEEEeecCCCC-----------------------CCC-----------CCeEEEEECCCCCEEEEEeC----------
Q 010669 342 GICLTQVSDAGTD-----------------------GRP-----------EGYTSAAFHPDGLILGTGTS---------- 377 (504)
Q Consensus 342 ~~~~~~~~~~~~~-----------------------~~~-----------~~v~~~~~~pdg~~l~~g~~---------- 377 (504)
|+.+......... ... ..-..++|+|+..+++++..
T Consensus 339 G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 418 (689)
T 1yiq_A 339 GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP 418 (689)
T ss_dssp CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCS
T ss_pred CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecc
Confidence 9987544321100 000 01123788998887777532
Q ss_pred -----------------------------------CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-
Q 010669 378 -----------------------------------EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG- 421 (504)
Q Consensus 378 -----------------------------------dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~- 421 (504)
+|.|..||+.+++.+-.+..+. ++..-.+...|.+++.++.|+
T Consensus 419 ~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~ 497 (689)
T 1yiq_A 419 EAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGR 497 (689)
T ss_dssp SCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSE
T ss_pred ccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCc
Confidence 3789999999999888776443 333345566778899999998
Q ss_pred EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEEE
Q 010669 422 VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVA 460 (504)
Q Consensus 422 v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~ 460 (504)
|+.||.++++.+..+.... .....-+.|..+|+ |+++.
T Consensus 498 l~a~D~~tG~~lw~~~~~~-~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 498 VIAYAADTGEKLWEQPAAS-GVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEEE
T ss_pred EEEEECCCCccceeeeCCC-CcccCceEEEECCEEEEEEE
Confidence 9999999999998887643 22223467777775 55544
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.94 E-value=6.1e-07 Score=80.55 Aligned_cols=199 Identities=14% Similarity=0.139 Sum_probs=135.1
Q ss_pred ceEEEcccCcc--ceeEEEEeeCCCEEEEEeCCC--cEEEEeCCCCCCcceeEEeccCCc-CeEEEEEccCCCEEEEEeC
Q 010669 256 QIVTTLSGHSK--KVTSVKFVTEGDLFLTGSADK--TVRVWQGSEDGNYDCKHTLKDHTA-EVQAVTVHATNKYFVTASL 330 (504)
Q Consensus 256 ~~~~~~~~h~~--~v~~l~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~h~~-~v~~l~~~p~~~~l~s~s~ 330 (504)
+.+.++. |.. -.-.+.|+. +.++.+.+.+| .|+.+|+.++ +....+..... .-..+++. .+..+...-.
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg---kv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG---RILQRAEVPPPYFGAGIVAW-RDRLIQLTWR 83 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC---CEEEEEECCTTCCEEEEEEE-TTEEEEEESS
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCC---CEEEEEeCCCCcceeEEEEe-CCEEEEEEee
Confidence 4556663 443 355888875 56666666654 8999999986 44444432221 12334443 2334444456
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----CCeEEE
Q 010669 331 DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV-----GAVTAI 405 (504)
Q Consensus 331 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-----~~i~~l 405 (504)
++.+.+||..+.+.+..+... + .-..++ +|+..|+++..++.|.++|..+.+.+.++.... ..++.+
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~~---~---~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRYP---G---EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp SSEEEEEETTTTEEEEEEECS---S---CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred CCEEEEEECCcCcEEEEEeCC---C---CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceee
Confidence 889999999999999988742 1 113343 566667777778999999999998877775321 356677
Q ss_pred EEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC-----------CCCCeeEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 406 SFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD-----------SETPTNSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 406 ~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~-----------~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
.|. +|..++...... |.+.|..+++.+..+.... .....+.|+|+|+++.|++.+.. =++|.+
T Consensus 156 e~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v 231 (243)
T 3mbr_X 156 EWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEI 231 (243)
T ss_dssp EEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred EEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEE
Confidence 776 676555443444 9999999999988877431 12356899999999999999888 777776
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.88 E-value=1.1e-06 Score=85.72 Aligned_cols=223 Identities=10% Similarity=0.046 Sum_probs=136.3
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccC---------ccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEE
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGH---------SKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHT 305 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h---------~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 305 (504)
+..+++++.++.|..||..+|+.+..+... ...+.+. ...++..++.++.++.|..+|..++ +....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG---~~~W~ 128 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDG---TVAWQ 128 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTC---CEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCC---CEEEE
Confidence 677888888999999999999987666532 1222222 2224567888899999999999876 33333
Q ss_pred eccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q 010669 306 LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385 (504)
Q Consensus 306 ~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd 385 (504)
............. .+..++.++.++.+..+|..+++...................... .+..+++++.+|.|..+|
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEE
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEE
Confidence 3322211111112 245788889999999999999988877653211000000011111 144677888899999999
Q ss_pred cCCCceeeeeeCCCCC----eE---EEEEcC--CCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC
Q 010669 386 VKSQANVAKFDGHVGA----VT---AISFSE--NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455 (504)
Q Consensus 386 ~~~~~~~~~~~~~~~~----i~---~l~~s~--~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~ 455 (504)
..+++.+..+...... +. .+.-.| .+..++.++.++ +..+|..+++.+...... ....+.. ++.
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~~~--~~~ 278 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG----SVNDFIV--DGN 278 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC----CEEEEEE--ETT
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC----CCCCceE--ECC
Confidence 9999887666532100 00 011111 245566666666 999999999877665432 3444444 355
Q ss_pred EEEEEeCc--EEEEEeec
Q 010669 456 YLAVASAD--IRVYQVAS 471 (504)
Q Consensus 456 ~l~~~~~d--i~vw~~~~ 471 (504)
.+++++.+ +..+|..+
T Consensus 279 ~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp EEEEEETTCCEEEEETTT
T ss_pred EEEEEcCCCeEEEEECCC
Confidence 66666655 77777633
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.87 E-value=1.1e-05 Score=87.01 Aligned_cols=242 Identities=9% Similarity=0.042 Sum_probs=158.1
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEccc-------CccceeEEEEeeCCCEEEEEeCCCcEEEEeCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG-------HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-------h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~ 295 (504)
...|.++...++|.+.+ |+.+| |.+|+..++........ ....|.++...++|. |-.|+.++-|..|+..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 35699999998888655 44454 88899877654433211 235699998888876 4556777778889865
Q ss_pred CCCCcceeEEec----cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCC---CCCCCCeEEEEECCC
Q 010669 296 EDGNYDCKHTLK----DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT---DGRPEGYTSAAFHPD 368 (504)
Q Consensus 296 ~~~~~~~~~~~~----~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~~pd 368 (504)
.. .+....... .....|.++...++|+ |..|+.++-|..||..++........... ......|.++...++
T Consensus 339 ~~-~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 339 RN-RFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GG-SSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred cc-cceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 52 111111100 1235699999887776 45577787899999887765433211100 012356899999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeeeee----CCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeec----CC
Q 010669 369 GLILGTGTSEALVKIWDVKSQANVAKFD----GHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFES----SD 440 (504)
Q Consensus 369 g~~l~~g~~dg~I~iwd~~~~~~~~~~~----~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~----~~ 440 (504)
|.+|.+|+.++-|.+||..+++...... .....|.++...++|.+.+... +|+.+||..+++....... ..
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBC
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccccccccc
Confidence 9866677777779999988765432211 1345799999988888666554 7799999877654322111 11
Q ss_pred CCCCeeEEEECCCCCEEEEEeCcEEEEEee
Q 010669 441 SETPTNSVDFDHSGSYLAVASADIRVYQVA 470 (504)
Q Consensus 441 ~~~~v~~i~~~~~g~~l~~~~~di~vw~~~ 470 (504)
....|.++..+++|.+.+.....+..|+..
T Consensus 496 ~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~ 525 (795)
T 4a2l_A 496 VSKQITTLFRDSHKRLWIGGEEGLSVFKQE 525 (795)
T ss_dssp CCCCEEEEEECTTCCEEEEESSCEEEEEEE
T ss_pred CCceEEEEEECCCCCEEEEeCCceEEEeCC
Confidence 135789999999998877666338888873
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=4.9e-07 Score=81.86 Aligned_cols=188 Identities=13% Similarity=0.053 Sum_probs=129.0
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCcc
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
..-...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ - ..........++++ +.+..-.++.+.+||..+. +
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl---~ 127 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP---Q 127 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTT---E
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcC---c
Confidence 3445678887 4667788888899999999999987776 2 23333322333444 4444557889999999875 5
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I 381 (504)
.+.++... ..-+.++ ++++.|+.+..++.|.++|..+.+....+........-..++.+.|. +|.+++..-.++.|
T Consensus 128 ~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 128 RERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred EEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 66666532 2224444 46788888777899999999999888877632111111245667777 77777666678899
Q ss_pred EEEEcCCCceeeeeeCC-------------CCCeEEEEEcCCCcEEEEEeCC
Q 010669 382 KIWDVKSQANVAKFDGH-------------VGAVTAISFSENGYYLATAAHD 420 (504)
Q Consensus 382 ~iwd~~~~~~~~~~~~~-------------~~~i~~l~~s~~g~~l~s~~~d 420 (504)
.+.|.++++.+..+.-. ....+.|+|+|++..|++.+..
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 99999999988776521 1367899999976655555543
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=1.1e-05 Score=87.08 Aligned_cols=265 Identities=8% Similarity=0.018 Sum_probs=166.5
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc------cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS------GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~ 296 (504)
...|.++...++|.+- .|+.++-|..|+..++....... -....|.++...++|. |-.|+.++-|..|+..+
T Consensus 309 ~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~ 386 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPIT 386 (795)
T ss_dssp SSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTT
T ss_pred CCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCC
Confidence 3579999999888754 46666678888876554322111 1234689998887776 45577777799998776
Q ss_pred CCCcceeEEec--------cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC
Q 010669 297 DGNYDCKHTLK--------DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD 368 (504)
Q Consensus 297 ~~~~~~~~~~~--------~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd 368 (504)
+ ....... .....|.++...++++.|..|+.++.+..||..+++........ .......|.++...++
T Consensus 387 ~---~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~-~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 387 Q---RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN-SQLVNENVYAILPDGE 462 (795)
T ss_dssp C---CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT-SCCSCSCEEEEEECSS
T ss_pred C---cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC-CCcCCCeeEEEEECCC
Confidence 3 1111110 12357899998888885777888888999999887654332111 1123457899999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeeeeeC------CCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeec---C
Q 010669 369 GLILGTGTSEALVKIWDVKSQANVAKFDG------HVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFES---S 439 (504)
Q Consensus 369 g~~l~~g~~dg~I~iwd~~~~~~~~~~~~------~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~---~ 439 (504)
|.+.+.. .+ -|.+||..+++....... ....|.++...++|.+.+... +||..||..+.+. .+.. .
T Consensus 463 g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~ 537 (795)
T 4a2l_A 463 GNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPV 537 (795)
T ss_dssp SCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCS
T ss_pred CCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCC
Confidence 8866554 44 488899877644322111 235799999999998766555 7799999876654 2221 0
Q ss_pred --CCCCCeeEEEECCCCCEEEEEeCcEEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 440 --DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 440 --~~~~~v~~i~~~~~g~~l~~~~~di~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.....|.++..+++|.+.++....+..|+... ..........+. ....|.++...++|.
T Consensus 538 ~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~~~--~~~~~~~~~~gl-~~~~i~~i~~d~~g~ 598 (795)
T 4a2l_A 538 SNVTKLFTNCIYEASNGIIWVGTREGFYCFNEKD--KQIKRYNTTNGL-PNNVVYGILEDSFGR 598 (795)
T ss_dssp CGGGGSCEEEEEECTTSCEEEEESSCEEEEETTT--TEEEEECGGGTC-SCSCEEEEEECTTSC
T ss_pred CCCCCCeeEEEEECCCCCEEEEeCCCceeECCCC--CcEEEeCCCCCC-chhheEEEEECCCCC
Confidence 11346899999999987665544477777521 222222222222 123566666665554
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=1e-05 Score=76.41 Aligned_cols=229 Identities=14% Similarity=0.091 Sum_probs=137.6
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCC--cEEEEeCCCCCCcce
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK--TVRVWQGSEDGNYDC 302 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~~ 302 (504)
....++|+++++++++-..++.|..||... .....+. ....+..+++.++++++++....+ .|..+|..++ ....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g-~~~~ 109 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG-TVET 109 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS-CEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC-eEEE
Confidence 467899999999877777889999999765 3333333 234688999999998666554332 3666665553 2222
Q ss_pred eEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeE-EEEeecC----CCCCCCCCeEEEEECCCCCEEEE-Ee
Q 010669 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC-LTQVSDA----GTDGRPEGYTSAAFHPDGLILGT-GT 376 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~----~~~~~~~~v~~~~~~pdg~~l~~-g~ 376 (504)
+..+. .......++..+++..+++-..++.|.++|..++.. +...... .....-.....+ ++++..|++ -.
T Consensus 110 ~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 110 LLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 22221 222345555555554455544688999999876532 2111100 000111234445 788765554 45
Q ss_pred CCCcEEEEEcCC-Cce--eeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCccee--eeecCCCCCCeeEEEE
Q 010669 377 SEALVKIWDVKS-QAN--VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFR--SFESSDSETPTNSVDF 450 (504)
Q Consensus 377 ~dg~I~iwd~~~-~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~--~~~~~~~~~~v~~i~~ 450 (504)
..+.|..||+.. ++. ...+. .......++++++|+++++....+ |.+||.. ++... .+... ....++++|
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~--~~~p~~~a~ 262 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG--VIGSTAVAF 262 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT--CTTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc--cCCceEEEE
Confidence 678999999864 321 11221 113467789999998766655555 9999975 54422 23222 356899999
Q ss_pred C---CCCCEEEEEeCc
Q 010669 451 D---HSGSYLAVASAD 463 (504)
Q Consensus 451 ~---~~g~~l~~~~~d 463 (504)
. |++..|++++..
T Consensus 263 ~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 263 GQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CCSTTTTTEEEEEECT
T ss_pred ecccCCCCEEEEECCC
Confidence 8 888887776543
No 262
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.80 E-value=8.4e-07 Score=93.50 Aligned_cols=240 Identities=13% Similarity=0.145 Sum_probs=152.7
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccCc----cceeEEEEeeCCCEEEEEeC------CCcEEEEeCCCCCCcceeE
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHS----KKVTSVKFVTEGDLFLTGSA------DKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~v~~l~~s~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~ 304 (504)
+..+++++.|+.|+.+|..+|+.+..+.... ..+.+--...++ .++++.. +|.|..||..++. .+-
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~---~~W 192 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGK---LAW 192 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCC---EEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCc---EEE
Confidence 5678888899999999999999887765421 111111011144 4555433 5899999998863 333
Q ss_pred Eecc---C----------------------------CcCeEEEEEccCCCEEEEEeCCC-------------------eE
Q 010669 305 TLKD---H----------------------------TAEVQAVTVHATNKYFVTASLDN-------------------TW 334 (504)
Q Consensus 305 ~~~~---h----------------------------~~~v~~l~~~p~~~~l~s~s~dg-------------------~i 334 (504)
.+.. . ......+++.|+...++.++.++ .|
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 2221 0 01112467888888888888776 39
Q ss_pred EEEECCCCeEEEEeecCCCCC----CCCCeEEEEECCCCC---EEEEEeCCCcEEEEEcCCCceeeeeeCCC--------
Q 010669 335 CFYDLSSGICLTQVSDAGTDG----RPEGYTSAAFHPDGL---ILGTGTSEALVKIWDVKSQANVAKFDGHV-------- 399 (504)
Q Consensus 335 ~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~pdg~---~l~~g~~dg~I~iwd~~~~~~~~~~~~~~-------- 399 (504)
..+|.++|+.+..+....... ...+.....+..+|+ .++.++.+|.++++|..+++.+..+....
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 999999999888776321111 012333333334665 68899999999999999998874332111
Q ss_pred ---C-C------------------------eEEEEEcCCCcEEEEEe---------------------------------
Q 010669 400 ---G-A------------------------VTAISFSENGYYLATAA--------------------------------- 418 (504)
Q Consensus 400 ---~-~------------------------i~~l~~s~~g~~l~s~~--------------------------------- 418 (504)
+ + -..++++|+..+++...
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 0 0 01267777766555421
Q ss_pred ---CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEccCC
Q 010669 419 ---HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 419 ---~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h 485 (504)
.++ |..||+.+++.+...... .......+...+.++++++.+ +++||. ++++.+..+...
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~vf~g~~dg~l~a~d~----~tG~~l~~~~~~ 498 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYP---THWNGGTLSTAGNLVFQGTAAGQMHAYSA----DKGEALWQFEAQ 498 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEET----TTCCEEEEEECS
T ss_pred CCCccceEEEEeCCCCcEEEEccCC---CCCcCceeEeCCCEEEEECCcccchhhhh----hcChhheEecCC
Confidence 225 999999999987777653 233333445578888888877 888887 667777766543
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=3.5e-06 Score=75.63 Aligned_cols=188 Identities=12% Similarity=0.016 Sum_probs=127.6
Q ss_pred CCeEEEEeccCCCEEEEEeCCC--cEEEEcCCCCceEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCc
Q 010669 224 PGIVSLDIHYSKDVIATGGVDT--NAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNY 300 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~ 300 (504)
.-...+.|+. +.++.+.+.+| .|+++|+.+++.+..+.-... .........++ +.+..-.++.+.+||..+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl--- 95 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATL--- 95 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTT---
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcC---
Confidence 4566888886 56666666654 899999999999888764332 33332333344 4445557899999999875
Q ss_pred ceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCc
Q 010669 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380 (504)
Q Consensus 301 ~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~ 380 (504)
+.+.++... ..-..++ +++..|+.+..++.|.++|..+.+....+........-..++.+.|. +|.+++..-.+..
T Consensus 96 ~~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred cEEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 666666532 2224454 46777777777889999999999888777632110111234566665 7777766667889
Q ss_pred EEEEEcCCCceeeeeeCC-------------CCCeEEEEEcCCCcEEEEEeCC
Q 010669 381 VKIWDVKSQANVAKFDGH-------------VGAVTAISFSENGYYLATAAHD 420 (504)
Q Consensus 381 I~iwd~~~~~~~~~~~~~-------------~~~i~~l~~s~~g~~l~s~~~d 420 (504)
|.+.|.++++.+..+.-. ....+.|+|+|++..|++.+..
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 999999999988776521 1356899999987777666654
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.76 E-value=4e-05 Score=73.87 Aligned_cols=256 Identities=8% Similarity=-0.037 Sum_probs=147.7
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCCCcce
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~~~~~ 302 (504)
+..+|.+..+++ +|+.+. ...|+..++........+.. ...+..++|++.+..|+ +-...+.|..+++.... .
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~ 107 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSN---V 107 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---C
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCC---c
Confidence 345676666643 444443 34588888876554444443 34588999997555544 54567889999887642 2
Q ss_pred eEEeccCCcCeEEEEEccCCCE-EEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-CEEEEEeCC-C
Q 010669 303 KHTLKDHTAEVQAVTVHATNKY-FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-LILGTGTSE-A 379 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-~~l~~g~~d-g 379 (504)
...+.........+++.+.+.. +++-...+.|.+.++........+. ..-.....++++|.+ .++++-... +
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-----~~l~~P~~iavdp~~g~ly~td~~~~~ 182 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGNTP 182 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----TTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-----CCCCCcceEEEecCcCeEEEeccCCCC
Confidence 2222222234578888875554 4555557889999987654333222 112457899999954 455554455 7
Q ss_pred cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEE
Q 010669 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457 (504)
Q Consensus 380 ~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l 457 (504)
.|..+++............-...+.|+|++++..|+.+... + |..+|+.... ...+.... ......+++. +..|
T Consensus 183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~~-~~~P~giav~--~~~l 258 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQG-LPHPFAITVF--EDSL 258 (349)
T ss_dssp EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS-CSSEEEEEEE--TTEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEeCC-CCCceEEEEE--CCEE
Confidence 89999886433222222233467899999877777766655 4 9999986433 23222211 3456788883 3455
Q ss_pred EEEeCc-EEEEEeeccCccceeEEEccCCCCCCceeEEEEee
Q 010669 458 AVASAD-IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFV 498 (504)
Q Consensus 458 ~~~~~d-i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~ 498 (504)
+.+... -+|+.++. .+++.+..+... .....++.++.
T Consensus 259 y~td~~~~~V~~~~~--~~G~~~~~i~~~--~~~p~gi~v~~ 296 (349)
T 3v64_C 259 YWTDWHTKSINSANK--FTGKNQEIIRNK--LHFPMDIHTLH 296 (349)
T ss_dssp EEEETTTTEEEEEET--TTCCSCEEEECS--CSCCCCEEEEC
T ss_pred EEecCCCCeEEEEEc--cCCCccEEeccC--CCCCceEEEEc
Confidence 555544 44444432 233333333322 33455665553
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.75 E-value=3.4e-06 Score=90.22 Aligned_cols=195 Identities=9% Similarity=0.009 Sum_probs=115.2
Q ss_pred CeEEEEec-cCCCEEEEEeC-CC----cEEEEcCCCC-ceEEEcccCccceeEEEEeeCCCEEEEEeCC-----CcEEEE
Q 010669 225 GIVSLDIH-YSKDVIATGGV-DT----NAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD-----KTVRVW 292 (504)
Q Consensus 225 ~I~~~~~s-~~~~~l~sg~~-dg----~i~vwd~~~~-~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d-----g~i~iw 292 (504)
.+....|| |||++|+.+.. +| .|+++|+.++ +.+.. .-......+.|+|||+.|+....| ..|.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57889999 99998875543 23 4999999988 63211 001123578999999877766654 257778
Q ss_pred eCCCCCCcceeEEec-cCCcCeEEEEEccCCCEEEEEeC---CCeEEEEECCCCe-EE--EEeecCCCCCCCCCeEEEEE
Q 010669 293 QGSEDGNYDCKHTLK-DHTAEVQAVTVHATNKYFVTASL---DNTWCFYDLSSGI-CL--TQVSDAGTDGRPEGYTSAAF 365 (504)
Q Consensus 293 d~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~l~s~s~---dg~i~iwd~~~~~-~~--~~~~~~~~~~~~~~v~~~~~ 365 (504)
++.++.. .....+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+.. ........+.|
T Consensus 253 ~lgt~~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~----~~~~~~~s~~~ 327 (751)
T 2xe4_A 253 VMGKLQS-EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP----REKGVRYDVQM 327 (751)
T ss_dssp ETTSCGG-GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC----CCTTCCEEEEE
T ss_pred ECCCCch-hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec----CCCCceEEEee
Confidence 8766421 1122222 22345678899999998887653 3468889998752 12 23321 22234556666
Q ss_pred CCCCCEEEEEeCC----CcEEEEEcCCCceeee-eeCCCC--CeEEEEEcCCCcEEEEEeCCc---EEEEEc
Q 010669 366 HPDGLILGTGTSE----ALVKIWDVKSQANVAK-FDGHVG--AVTAISFSENGYYLATAAHDG---VKLWDL 427 (504)
Q Consensus 366 ~pdg~~l~~g~~d----g~I~iwd~~~~~~~~~-~~~~~~--~i~~l~~s~~g~~l~s~~~d~---v~vwd~ 427 (504)
+.++.+++....+ ..|..+|+.++..... +..+.. .+..+.+. .+.++++...++ |.++|+
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5555555555443 3677777764322222 333333 45566665 344555566664 777786
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.70 E-value=1.4e-05 Score=75.45 Aligned_cols=224 Identities=11% Similarity=0.043 Sum_probs=134.1
Q ss_pred ceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC--Ce
Q 010669 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD--NT 333 (504)
Q Consensus 256 ~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d--g~ 333 (504)
+.+..+... .....++|+++++++++-..++.|..||.... ....+. ......++++.++++++++.... ..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~----~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN----QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC----EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc----eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcce
Confidence 344445322 45778999999987777668899999987652 222222 23468899999999966655432 24
Q ss_pred EEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce-eeee---------eCCCCCeE
Q 010669 334 WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN-VAKF---------DGHVGAVT 403 (504)
Q Consensus 334 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~-~~~~---------~~~~~~i~ 403 (504)
|..+|..+++........ .......++..+++..+++-..+|.|+++|...++. +... ...-...+
T Consensus 97 v~~~d~~~g~~~~~~~~~----~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLP----DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp EEEEECTTSCEEEEEECT----TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred EEEEcCCCCeEEEEEeCC----CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 777787777654333211 112234556666666566555689999999865421 2110 01112355
Q ss_pred EEEEcCCCcEEEEEeCC-c-EEEEEcCC-Ccc--eeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccc
Q 010669 404 AISFSENGYYLATAAHD-G-VKLWDLRK-LKN--FRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADW 476 (504)
Q Consensus 404 ~l~~s~~g~~l~s~~~d-~-v~vwd~~~-~~~--~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~ 476 (504)
.+ ++++.+|+.+... + |..||+.. +.. ...+.. ......++++++|++.++.... |.+|+. .+
T Consensus 173 gi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~-----~G 242 (306)
T 2p4o_A 173 GL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAP-----DR 242 (306)
T ss_dssp EE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECT-----TC
T ss_pred Cc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECC-----CC
Confidence 56 7788777766654 4 99999874 321 112211 1346779999999876655433 777663 24
Q ss_pred ee--EEEccCCCCCCceeEEEEe---ecCc
Q 010669 477 NC--IKTFPDLSGTGAASFLFLF---VLGQ 501 (504)
Q Consensus 477 ~~--i~~~~~h~~~~~v~~l~~~---~~g~ 501 (504)
+. +..+... ....++++|. +++.
T Consensus 243 ~~~~~~~~~~~--~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 243 STTIIAQAEQG--VIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp CEEEEECGGGT--CTTEEEEEECCSTTTTT
T ss_pred CEEEEeecccc--cCCceEEEEecccCCCC
Confidence 33 3334321 3567888887 6754
No 267
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.69 E-value=5.6e-05 Score=72.13 Aligned_cols=262 Identities=9% Similarity=0.081 Sum_probs=146.9
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc----cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCC
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS----GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~----~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
...+.+|.|.+++..+++ +..|.|. .....|+.-..+. .....+.++.|.+ +..+ .++.+|.|.. ..+.+.
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~-~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGW-IVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEE-EEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEE-EEECCCeEEE-ECCCCC
Confidence 347999999887777775 4567653 3334444333322 1244688999875 4444 4455665433 333344
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
.+........+.+.+..+.+.+++..++.+ .+|.|.. ..+.++....... .....+..+.+.+++.+++++...
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETTS
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECCC
Confidence 444433222234557788887777666555 4555432 2233443333331 223468899999999888777554
Q ss_pred CcEEEEEc--CCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecC--CCCCCeeEEEECCC
Q 010669 379 ALVKIWDV--KSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS--DSETPTNSVDFDHS 453 (504)
Q Consensus 379 g~I~iwd~--~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~--~~~~~v~~i~~~~~ 453 (504)
+..+-+|- .+.+.+. ......+..+.+.+++.+++.+ .++ +++.+...++....+... .....+..+.+.++
T Consensus 184 ~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp SEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred cEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC
Confidence 44444442 2223332 2345678899999998876655 455 766643334433333221 11235889999998
Q ss_pred CCEEEEEeCcEEEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 454 GSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 454 g~~l~~~~~di~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
+.+++++... .+|.-....++|..+.....+ ...+.++.|..+++
T Consensus 261 ~~~~~~g~~g-~i~~S~DgG~tW~~~~~~~~~--~~~~~~v~~~~~~~ 305 (327)
T 2xbg_A 261 NEVWLAGGAG-ALLCSQDGGQTWQQDVDVKKV--PSNFYKILFFSPDQ 305 (327)
T ss_dssp SCEEEEESTT-CEEEESSTTSSCEECGGGTTS--SSCCCEEEEEETTE
T ss_pred CEEEEEeCCC-eEEEeCCCCcccEEcCccCCC--CCCeEEEEEECCCc
Confidence 8887776654 223333334678766543232 34567777765543
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=6.3e-06 Score=78.54 Aligned_cols=225 Identities=11% Similarity=0.068 Sum_probs=134.0
Q ss_pred ceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEec-----------------cCCcCeEEEEEccCCCEEEEEe
Q 010669 267 KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK-----------------DHTAEVQAVTVHATNKYFVTAS 329 (504)
Q Consensus 267 ~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------------~h~~~v~~l~~~p~~~~l~s~s 329 (504)
...+++|.+++++++++..++.|..|+..+.. ........ .....+.++++.+++..|+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 45678899998878888889999999876531 11111000 0113578999997334455565
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeC-----------------CCcEEEEEcCCCce
Q 010669 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTS-----------------EALVKIWDVKSQAN 391 (504)
Q Consensus 330 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~-----------------dg~I~iwd~~~~~~ 391 (504)
..+.|..+|..++... .+..............+++.+ +|+++++-.. +|.|..||..+++.
T Consensus 99 ~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 5566888887765422 221100001113468899999 9987776432 36788899876654
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCc--ceeeeecCCCCCCeeEEEECCCCCEEEEEeC-----
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLK--NFRSFESSDSETPTNSVDFDHSGSYLAVASA----- 462 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~--~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~----- 462 (504)
..... .......|+|+++|.+|+.+... + |.+|++.... ....+... .. ...++++++|++.++...
T Consensus 178 ~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 178 TLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC--CC-CCCeEECCCCCEEEEecCccccc
Confidence 32222 22345789999999877666443 4 9999987532 11222211 23 788999999987776644
Q ss_pred -----cEEEEEeeccCccceeEEEccCCCC--CCceeEEEEeecCc
Q 010669 463 -----DIRVYQVASVKADWNCIKTFPDLSG--TGAASFLFLFVLGQ 501 (504)
Q Consensus 463 -----di~vw~~~~~~~~~~~i~~~~~h~~--~~~v~~l~~~~~g~ 501 (504)
..+|+.++ ..++.+..+....+ ...++++.+ .+|+
T Consensus 254 ~~~~~~~~v~~~d---~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~ 295 (322)
T 2fp8_A 254 MHGRVDPKGIKFD---EFGNILEVIPLPPPFAGEHFEQIQE-HDGL 295 (322)
T ss_dssp TTSCEEEEEEEEC---TTSCEEEEEECCTTTTTSCCCEEEE-ETTE
T ss_pred ccCCCccEEEEEC---CCCCEEEEEECCCCCccccceEEEE-eCCE
Confidence 34555553 34566666644311 134555554 3443
No 269
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.67 E-value=7.4e-07 Score=93.94 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=149.1
Q ss_pred EEEecc-CCCEEEEEeCCC-----------cEEEEcCCCCce--EEEcc-cCccceeEEEEeeCCCEEEEEeC-CCcEEE
Q 010669 228 SLDIHY-SKDVIATGGVDT-----------NAVLFDRPSGQI--VTTLS-GHSKKVTSVKFVTEGDLFLTGSA-DKTVRV 291 (504)
Q Consensus 228 ~~~~s~-~~~~l~sg~~dg-----------~i~vwd~~~~~~--~~~~~-~h~~~v~~l~~s~~~~~l~s~s~-dg~i~i 291 (504)
++++.+ ++++++.|+.++ .+.+||..+++. +..+. .+.....++++..++.+++.|+. ++.+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888888887543 588999887653 22221 23333445777789999999884 558999
Q ss_pred EeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEe-CC-----CeEEEEECCCCeEEEEe----ecCCCCCCCCCeE
Q 010669 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS-LD-----NTWCFYDLSSGICLTQV----SDAGTDGRPEGYT 361 (504)
Q Consensus 292 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s-~d-----g~i~iwd~~~~~~~~~~----~~~~~~~~~~~v~ 361 (504)
||..+. .+.....+... ..-.++...++++.++.|+ .+ ..+.+||..++.-...- .......+
T Consensus 270 yd~~t~-~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~----- 342 (656)
T 1k3i_A 270 YDSSSD-SWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK----- 342 (656)
T ss_dssp EEGGGT-EEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-----
T ss_pred ecCcCC-ceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-----
Confidence 998763 33333222211 1123455667899999988 44 46999999887644321 00000000
Q ss_pred EEEECCCCCEEEEEeCCC---------cEEEEEcCCCceeeeeeCCC---------CCeEEEEEcC-CCcEEEEEeCC--
Q 010669 362 SAAFHPDGLILGTGTSEA---------LVKIWDVKSQANVAKFDGHV---------GAVTAISFSE-NGYYLATAAHD-- 420 (504)
Q Consensus 362 ~~~~~pdg~~l~~g~~dg---------~I~iwd~~~~~~~~~~~~~~---------~~i~~l~~s~-~g~~l~s~~~d-- 420 (504)
...+..++.+++.|+.+| .+..||..+..-......+. ..-.++.|.. ++++++.|+.+
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 012234556666665544 46788887665332222111 1234455543 77888887732
Q ss_pred ----------cEEEEEcCCCcceeee--ecCCCCCCeeEEEECCCCCEEEEEeC------------c-EEEEEeeccCcc
Q 010669 421 ----------GVKLWDLRKLKNFRSF--ESSDSETPTNSVDFDHSGSYLAVASA------------D-IRVYQVASVKAD 475 (504)
Q Consensus 421 ----------~v~vwd~~~~~~~~~~--~~~~~~~~v~~i~~~~~g~~l~~~~~------------d-i~vw~~~~~~~~ 475 (504)
.|.+||..+..-.... ..+. ...-.+++..|+|+++++||. . +.+||... ..
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~-~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t--~~ 499 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSPNTVFASNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ--DT 499 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCCEEEECTTCCSS-CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG--TE
T ss_pred CCCCcCCcceEEEcCCCCCCCeeEEccCCCCC-CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC--Cc
Confidence 2667787665433222 1111 122345567789999999873 1 77888644 56
Q ss_pred ceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 476 WNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 476 ~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
|..+..+... -....+..+.++|++
T Consensus 500 W~~~~~~~~~--R~~hs~a~ll~dg~v 524 (656)
T 1k3i_A 500 FYKQNPNSIV--RVYHSISLLLPDGRV 524 (656)
T ss_dssp EEECCCCSSC--CCTTEEEEECTTSCE
T ss_pred eeecCCCCCc--cccccHhhcCCCcEE
Confidence 8776654332 112233344566654
No 270
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.67 E-value=5.2e-06 Score=85.65 Aligned_cols=238 Identities=14% Similarity=0.079 Sum_probs=146.4
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccCc--c--ceeEEEEeeCCCEEEEEeC------CCcEEEEeCCCCCCcceeE
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHS--K--KVTSVKFVTEGDLFLTGSA------DKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--~--~v~~l~~s~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~ 304 (504)
+..+++++.|+.+..+|..+|+.+..+.... . .+.+--...++ .+++++. +|.|..+|..++. .+-
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~---~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGE---LKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCC---EEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCc---EEE
Confidence 5677888889999999999999887654221 0 12211011144 4555554 7899999998863 332
Q ss_pred EeccCCc-------------------------------------Ce-EEEEEccCCCEEEEEeCC---------------
Q 010669 305 TLKDHTA-------------------------------------EV-QAVTVHATNKYFVTASLD--------------- 331 (504)
Q Consensus 305 ~~~~h~~-------------------------------------~v-~~l~~~p~~~~l~s~s~d--------------- 331 (504)
.+..... .+ ..+++.+....++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 2221100 00 135566666677666532
Q ss_pred -CeEEEEECCCCeEEEEeecCCCC-----CCCCCeEEEEECCCCC---EEEEEeCCCcEEEEEcCCCceeeeeeCCC---
Q 010669 332 -NTWCFYDLSSGICLTQVSDAGTD-----GRPEGYTSAAFHPDGL---ILGTGTSEALVKIWDVKSQANVAKFDGHV--- 399 (504)
Q Consensus 332 -g~i~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~pdg~---~l~~g~~dg~I~iwd~~~~~~~~~~~~~~--- 399 (504)
+.|..+|.++++.+..+...... ....++ -+....+|+ .++.++.+|.++++|..+++.+..+....
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 36999999999988777532110 111222 233334774 67788999999999999998876654211
Q ss_pred ----------CCe--------------------------EEEEEcCCCcEEEEEe-------------------------
Q 010669 400 ----------GAV--------------------------TAISFSENGYYLATAA------------------------- 418 (504)
Q Consensus 400 ----------~~i--------------------------~~l~~s~~g~~l~s~~------------------------- 418 (504)
.++ ..++|+|++.+|++..
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 111 2357888766666653
Q ss_pred ------------CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEcc
Q 010669 419 ------------HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483 (504)
Q Consensus 419 ------------~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~ 483 (504)
.++ |..||+.+++...++.... .+....+...+..+++++.| +++||. ++++.+-.+.
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~---~~~~~~~~t~gg~v~~g~~dg~l~a~D~----~tG~~lw~~~ 502 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF---AAWGGTLYTKGGLVWYATLDGYLKALDN----KDGKELWNFK 502 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS---CCCSBCEEETTTEEEEECTTSEEEEEET----TTCCEEEEEE
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCCC---CccceeEEECCCEEEEEcCCCeEEEEEC----CCCCEEEEEe
Confidence 235 9999999998877776532 22222233356677778777 888887 5677776665
Q ss_pred C
Q 010669 484 D 484 (504)
Q Consensus 484 ~ 484 (504)
.
T Consensus 503 ~ 503 (571)
T 2ad6_A 503 M 503 (571)
T ss_dssp C
T ss_pred C
Confidence 4
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.66 E-value=0.00021 Score=67.72 Aligned_cols=221 Identities=8% Similarity=-0.023 Sum_probs=129.6
Q ss_pred EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCE-EEEEeCCCcEEEEeCCCCCC-cceeEEeccCCcCeE
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL-FLTGSADKTVRVWQGSEDGN-YDCKHTLKDHTAEVQ 314 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~-l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~ 314 (504)
+|+.+. ...|+..|+...+....+. ....+..++|++.+.. +++-..++.|..+++..... ......+...-....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3468888988776655544 3456789999986554 44555678999998875100 011122222223467
Q ss_pred EEEEccCCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CC-CcEEEEEcCCCce
Q 010669 315 AVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SE-ALVKIWDVKSQAN 391 (504)
Q Consensus 315 ~l~~~p~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~d-g~I~iwd~~~~~~ 391 (504)
++++.+.+. .+++-...+.|.++|+........+. ........++++|.+..|+... .. +.|..+++. +..
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-----~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~ 154 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVD 154 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCC
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-----CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCC
Confidence 888887555 44555667899999987654333332 1123578999999555444443 33 788888874 333
Q ss_pred eeee-eCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeec-CCCCCCeeEEEECCCCCEEEEEeCc---E
Q 010669 392 VAKF-DGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD---I 464 (504)
Q Consensus 392 ~~~~-~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~-~~~~~~v~~i~~~~~g~~l~~~~~d---i 464 (504)
...+ ...-...+.|+|++++..|+.+... + |..+|+.. .....+.. .........++++ +..|+..... |
T Consensus 155 ~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 231 (316)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeE
Confidence 3333 2233568899999987777776655 4 99999874 33333322 1112456788885 3455555443 5
Q ss_pred EEEE
Q 010669 465 RVYQ 468 (504)
Q Consensus 465 ~vw~ 468 (504)
..++
T Consensus 232 ~~~~ 235 (316)
T 1ijq_A 232 FSAN 235 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 272
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.66 E-value=2.2e-08 Score=76.23 Aligned_cols=51 Identities=20% Similarity=0.385 Sum_probs=44.2
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC--CCCCCCCCC-CCCccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG--KCPVTGEPL-TMDDIV 51 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~-~~~~~~ 51 (504)
+.|+|+.+++.+||+.|.+||+|++.+|++|+..++ +||++++++ ..++|.
T Consensus 14 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~ 67 (92)
T 3ztg_A 14 LLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALI 67 (92)
T ss_dssp TEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCE
T ss_pred CCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccC
Confidence 469999999999999966899999999999999776 799999987 444543
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.66 E-value=5.2e-05 Score=74.16 Aligned_cols=255 Identities=8% Similarity=-0.033 Sum_probs=145.5
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCE-EEEEeCCCcEEEEeCCCCCCccee
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL-FLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
.-.|.+..+ ..+|+.+. ...|+.+++........+.. ...+..++|++.+.. +++-...+.|..+++... ...
T Consensus 78 ~~~C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~ 151 (386)
T 3v65_B 78 RRSCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVE 151 (386)
T ss_dssp SSCEEECSS-CCEEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEE
T ss_pred CCeECCccc-cceeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcE
Confidence 344555555 33444443 35688888876655444443 345889999975554 445556788999988764 222
Q ss_pred EEeccCCcCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE-EEeCC-Cc
Q 010669 304 HTLKDHTAEVQAVTVHATNKYF-VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG-TGTSE-AL 380 (504)
Q Consensus 304 ~~~~~h~~~v~~l~~~p~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~-~g~~d-g~ 380 (504)
..+.........+++.+.+..| ++-...+.|.+.++........+. ........++++|.+..|+ +-... +.
T Consensus 152 ~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-----~~l~~P~giavdp~~g~ly~td~~~~~~ 226 (386)
T 3v65_B 152 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGNTPR 226 (386)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-----CCCCCCcEEEEEcCCCeEEEeccCCCCE
Confidence 2222222345678888755544 455557789999887554333222 1124578999998655444 44444 78
Q ss_pred EEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEE
Q 010669 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458 (504)
Q Consensus 381 I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~ 458 (504)
|..+++............-...+.|+|+|++..|+.+... + |..+|+..... ..+.... ......++++ +..|+
T Consensus 227 I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~-~~~P~giav~--~~~ly 302 (386)
T 3v65_B 227 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG-LPHPFAITVF--EDSLY 302 (386)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSS-CSSEEEEEEE--TTEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECC-CCCceEEEEE--CCEEE
Confidence 8888886443332223333467899999877777666655 4 99999864332 3232211 3456788883 33455
Q ss_pred EEeCc-EEEEEeeccCccceeEEEccCCCCCCceeEEEEee
Q 010669 459 VASAD-IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFV 498 (504)
Q Consensus 459 ~~~~d-i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~ 498 (504)
.+... -+|+.++. .+++.+..+... .....++.++.
T Consensus 303 ~td~~~~~V~~~~~--~~G~~~~~i~~~--~~~p~gi~v~~ 339 (386)
T 3v65_B 303 WTDWHTKSINSANK--FTGKNQEIIRNK--LHFPMDIHTLH 339 (386)
T ss_dssp EEETTTTEEEEEET--TTCCSCEEEECS--CSCCCCEEEES
T ss_pred EeeCCCCeEEEEEC--CCCcceEEEccC--CCCCceEEEEc
Confidence 44443 44444422 233434444322 33455666553
No 274
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=3.9e-08 Score=70.93 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=48.6
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+||+...+||+|.+.+|.+|++.+.+||+++++++.+++++.
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 68 (72)
T 2djb_A 16 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSG 68 (72)
T ss_dssp GSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCC
T ss_pred CCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccccc
Confidence 36999999999999974599999999999999998999999999999988765
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=7.8e-05 Score=80.18 Aligned_cols=266 Identities=12% Similarity=0.046 Sum_probs=160.8
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc---------cCccceeEEEEeeCCCEEEEEeCCCcEEEEe
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS---------GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---------~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd 293 (504)
...|.++...++|.+ ..|+.++-|..|+..++....... .....|.++...++|. |..|+.++-|..||
T Consensus 312 ~~~v~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNNI-WIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCCE-EEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCCE-EEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEE
Confidence 457999999988874 456666668888877654332211 1235688888877776 44566556688898
Q ss_pred CCCCCCcceeEE-eccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 294 GSEDGNYDCKHT-LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 294 ~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
..+.. ...... .......|.++...+++.+ ..|+.++.+..+|..+++...... . ......|.++...++|.+.
T Consensus 390 ~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~-~--~~~~~~v~~i~~d~~g~lw 464 (781)
T 3v9f_A 390 NGKRV-AIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIEL-E--KNELLDVRVFYEDKNKKIW 464 (781)
T ss_dssp TTEEE-EECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCS-T--TTCCCCEEEEEECTTSEEE
T ss_pred CCCCe-EEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEecc-C--CCCCCeEEEEEECCCCCEE
Confidence 76521 111100 0123457899988877764 447777789999988775433221 1 1223578999999888755
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeCC-----CCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCC--CCCCe
Q 010669 373 GTGTSEALVKIWDVKSQANVAKFDGH-----VGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSD--SETPT 445 (504)
Q Consensus 373 ~~g~~dg~I~iwd~~~~~~~~~~~~~-----~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~--~~~~v 445 (504)
+ |+. +-|..||..+++........ ...|.++...++|.+.+....+||..||..+.+. ..+.... ....|
T Consensus 465 i-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i 541 (781)
T 3v9f_A 465 I-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTI 541 (781)
T ss_dssp E-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCE
T ss_pred E-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCee
Confidence 5 444 45888998776543322211 3579999999999876655446798899876543 3332211 13568
Q ss_pred eEEEECCCCCEEEEEeCcE-EEEEeeccCccceeEEEccCCCCCCceeEEEEeecCc
Q 010669 446 NSVDFDHSGSYLAVASADI-RVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQ 501 (504)
Q Consensus 446 ~~i~~~~~g~~l~~~~~di-~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~ 501 (504)
.++..+++|.+.++....+ ..|+.. .........-.+. ....|.++...++|.
T Consensus 542 ~~i~~d~~g~lWi~T~~Glv~~~d~~--~~~~~~~~~~~gl-~~~~i~~i~~d~~g~ 595 (781)
T 3v9f_A 542 NQIYRSSKGQMWLATGEGLVCFPSAR--NFDYQVFQRKEGL-PNTHIRAISEDKNGN 595 (781)
T ss_dssp EEEEECTTSCEEEEETTEEEEESCTT--TCCCEEECGGGTC-SCCCCCEEEECSSSC
T ss_pred EEEEECCCCCEEEEECCCceEEECCC--CCcEEEccccCCC-CCceEEEEEECCCCC
Confidence 9999999998776555335 666542 2223222222222 123466666655554
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=2.3e-05 Score=71.27 Aligned_cols=201 Identities=10% Similarity=0.139 Sum_probs=132.0
Q ss_pred CCeEEEEeccCCCE-EEEEeCCCcEEEEcCCCCceEEEcc-cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 224 PGIVSLDIHYSKDV-IATGGVDTNAVLFDRPSGQIVTTLS-GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 224 ~~I~~~~~s~~~~~-l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
..+..++|+|+++. +++...++.|...|.. ++.++.+. +-....-.|++.+++.++++.-.++.+.++++.......
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 46999999998764 4557778899999987 88877764 222457788888888777776677889999887654211
Q ss_pred eeEEec------cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCC---CeEEEEeecC--CCCCCCCCeEEEEECC-CC
Q 010669 302 CKHTLK------DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS---GICLTQVSDA--GTDGRPEGYTSAAFHP-DG 369 (504)
Q Consensus 302 ~~~~~~------~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~---~~~~~~~~~~--~~~~~~~~v~~~~~~p-dg 369 (504)
...... ..+.....++|+|.++.|+++.......+|.+.. ...+...... ........+..++++| .+
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 112221 2345578999999998777776655545554431 1111212100 0001234578999999 66
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeeCCC---------CCeEEEEEcCCCcEEEEEeCCc-EEEEEc
Q 010669 370 LILGTGTSEALVKIWDVKSQANVAKFDGHV---------GAVTAISFSENGYYLATAAHDG-VKLWDL 427 (504)
Q Consensus 370 ~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~---------~~i~~l~~s~~g~~l~s~~~d~-v~vwd~ 427 (504)
++++....++.|.++|.. ++.+..+.-.. .....|+|.++|++.++ ++.+ ++.|.-
T Consensus 186 ~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred eEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 777888888999999965 55554443211 26789999999985555 6666 776653
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.61 E-value=0.0002 Score=70.38 Aligned_cols=247 Identities=8% Similarity=-0.041 Sum_probs=143.1
Q ss_pred EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCCCc-ceeEEeccCCcCeE
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDGNY-DCKHTLKDHTAEVQ 314 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~ 314 (504)
+|+.+. ...|+..++........+. ....+..++|++.+..|+ +-...+.|..+++...... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444444 4678888887665544443 456688999998555554 4456788888888652110 12222232345678
Q ss_pred EEEEccCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-C-CCcEEEEEcCCCce
Q 010669 315 AVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-S-EALVKIWDVKSQAN 391 (504)
Q Consensus 315 ~l~~~p~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~-dg~I~iwd~~~~~~ 391 (504)
.+++.+.+ +++++-...+.|.+.+++.......+.. .......++++|.+..|+... . .+.|...++.....
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-----~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-----SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-----CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 89998744 4555555678999999986654444331 123578999999655554443 2 47899998864433
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEE
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRV 466 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~v 466 (504)
.......-...+.|++++++..|+.+... . |..+|+....................+++. +..|+..... |..
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFS 315 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEE
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEE
Confidence 33333333578999999887777777655 3 999998654332222221112345677773 4445544443 555
Q ss_pred EEeeccCccceeEEEccCCCCCCceeEEEEee
Q 010669 467 YQVASVKADWNCIKTFPDLSGTGAASFLFLFV 498 (504)
Q Consensus 467 w~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~ 498 (504)
++. .+++.+..+... .....++.++.
T Consensus 316 ~~~----~~G~~~~~i~~~--~~~p~~i~v~~ 341 (400)
T 3p5b_L 316 ANR----LTGSDVNLLAEN--LLSPEDMVLFH 341 (400)
T ss_dssp EES----SSCCCCEEEECS--CSCEEEEEEES
T ss_pred EEc----CCCCceEEEecC--CCCCceEEEEe
Confidence 553 334444444322 33455555553
No 278
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.59 E-value=5.9e-08 Score=70.37 Aligned_cols=52 Identities=19% Similarity=0.332 Sum_probs=44.3
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC--CCCCCCCCCC-CCcccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG--KCPVTGEPLT-MDDIVP 52 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~-~~~~~~ 52 (504)
+.|+|+.+++.+||+.|.+||+|++.+|.+|+..++ +||++++++. .+.|++
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~ 70 (74)
T 2yur_A 16 LLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALSG 70 (74)
T ss_dssp GSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTTC
T ss_pred CCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcccccc
Confidence 369999999999999976999999999999999874 7999999854 444444
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.59 E-value=1.5e-05 Score=82.28 Aligned_cols=235 Identities=12% Similarity=0.047 Sum_probs=142.2
Q ss_pred EEEEeCCCcEEEEcCCCCceEEEcccCc----cceeEEEEeeCCCEEEEEe------CCCcEEEEeCCCCCCcceeEEec
Q 010669 238 IATGGVDTNAVLFDRPSGQIVTTLSGHS----KKVTSVKFVTEGDLFLTGS------ADKTVRVWQGSEDGNYDCKHTLK 307 (504)
Q Consensus 238 l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~v~~l~~s~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~ 307 (504)
|++++.|+.|..+|..+|+.+....... ..+.+--...++ .+++++ .+|.|+.+|..++. .+-.+.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~---~~W~~~ 199 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGE---QVWRAY 199 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCC---EEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCc---EEEEEc
Confidence 7888889999999999999877654221 012211011144 455554 37999999998863 332222
Q ss_pred cCCc-------------------------------------Ce-EEEEEccCCCEEEEEeCC----------------Ce
Q 010669 308 DHTA-------------------------------------EV-QAVTVHATNKYFVTASLD----------------NT 333 (504)
Q Consensus 308 ~h~~-------------------------------------~v-~~l~~~p~~~~l~s~s~d----------------g~ 333 (504)
.... .+ ..+++.+....++.++.+ +.
T Consensus 200 ~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s 279 (599)
T 1w6s_A 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce
Confidence 1100 01 134556677777777665 38
Q ss_pred EEEEECCCCeEEEEeecCCCCC-----CCCCeEEEEEC-CCC---CEEEEEeCCCcEEEEEcCCCceeeeeeCCC-----
Q 010669 334 WCFYDLSSGICLTQVSDAGTDG-----RPEGYTSAAFH-PDG---LILGTGTSEALVKIWDVKSQANVAKFDGHV----- 399 (504)
Q Consensus 334 i~iwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-pdg---~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~----- 399 (504)
|.-+|.++|+.+..+....... ...++ -+... .+| ..++.++.+|.++++|.++++.+.......
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence 9999999999887776321110 11112 23332 567 577888999999999999998876553110
Q ss_pred -------C-Ce--------------------------EEEEEcCCCcEEEEEe---------------------------
Q 010669 400 -------G-AV--------------------------TAISFSENGYYLATAA--------------------------- 418 (504)
Q Consensus 400 -------~-~i--------------------------~~l~~s~~g~~l~s~~--------------------------- 418 (504)
+ ++ ..++|+|+..++++..
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 0 11 2356676655554421
Q ss_pred ------------CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccceeEEEcc
Q 010669 419 ------------HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483 (504)
Q Consensus 419 ------------~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~~ 483 (504)
..+ |..||+.+++.+-..... .+...-.+...+..+++++.| ++.||. ++++.+-+++
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg~vf~gt~dg~l~A~D~----~tG~~lW~~~ 511 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER---FAVWGGTMATAGDLVFYGTLDGYLKARDS----DTGDLLWKFK 511 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEET----TTCCEEEEEE
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC---CCccCcceEecCCEEEEECCCCeEEEEEC----CCCCEEEEee
Confidence 235 888999998877666532 112111123356777778877 888887 5566666554
Q ss_pred C
Q 010669 484 D 484 (504)
Q Consensus 484 ~ 484 (504)
.
T Consensus 512 l 512 (599)
T 1w6s_A 512 I 512 (599)
T ss_dssp C
T ss_pred C
Confidence 3
No 280
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.58 E-value=8.7e-08 Score=75.98 Aligned_cols=52 Identities=23% Similarity=0.407 Sum_probs=46.5
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC---CCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG---KCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+||++| +||+|++.+|.+|+..++ +||+++.+++.++|.+.
T Consensus 22 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~ 76 (112)
T 1jm7_A 22 LECPICLELIKEPVSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQES 76 (112)
T ss_dssp TSCSSSCCCCSSCCBCT-TSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCC
T ss_pred CCCcccChhhcCeEECC-CCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCcc
Confidence 46999999999999996 999999999999999764 79999999998877554
No 281
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.55 E-value=6.1e-08 Score=74.86 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=47.1
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCcccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVP 52 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 52 (504)
+.|+|+.+.+.+||+.+.+||+|++.+|.+|+..+.+||+++.++..++|.+
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~ 74 (99)
T 2y43_A 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN 74 (99)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEE
T ss_pred CCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhCCc
Confidence 4699999999999998569999999999999998889999999999877654
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=8.4e-05 Score=73.77 Aligned_cols=235 Identities=12% Similarity=0.123 Sum_probs=135.8
Q ss_pred CeEEEEecc-CCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeC-CC----cEEEEeCCCCC
Q 010669 225 GIVSLDIHY-SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA-DK----TVRVWQGSEDG 298 (504)
Q Consensus 225 ~I~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~-dg----~i~iwd~~~~~ 298 (504)
....++++| ++..|+++...+.|+.+|+..+....... .......++|++++++|+.+.. ++ .+.+++...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-- 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-- 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG--
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC--
Confidence 346789998 45555555555889999987665444333 4556889999999996666554 22 233344322
Q ss_pred CcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE-EEEEe
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI-LGTGT 376 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~-l~~g~ 376 (504)
.+.....+.. .....+++++| ++.++++-..++.|..+|...+........ ........++|+|+|++ +++-.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~----~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI----QDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC----SSSSCCEEEEECTTSSEEEEEET
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc----CCCCcceeEEEcCCCCEEEEEEC
Confidence 2221122221 23457788999 666666666778999999987765332221 11234678999999994 55555
Q ss_pred CCCcEEEEEcCC--Cce--eeeeeCC---------------CCCeE-EEEEc--------CCCcEEEEEeCCc-EEEEEc
Q 010669 377 SEALVKIWDVKS--QAN--VAKFDGH---------------VGAVT-AISFS--------ENGYYLATAAHDG-VKLWDL 427 (504)
Q Consensus 377 ~dg~I~iwd~~~--~~~--~~~~~~~---------------~~~i~-~l~~s--------~~g~~l~s~~~d~-v~vwd~ 427 (504)
..+.|..++... +.. +..+.+. -.... .++.. ++|.++++-..+. |+.++.
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~ 369 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP 369 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC
Confidence 678899988653 211 1122111 11233 45553 3355544444444 888883
Q ss_pred CCCcceeeeecC---------C-------CCCCeeEEEECCCCCEEEEEeCc---EEEEEe
Q 010669 428 RKLKNFRSFESS---------D-------SETPTNSVDFDHSGSYLAVASAD---IRVYQV 469 (504)
Q Consensus 428 ~~~~~~~~~~~~---------~-------~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~ 469 (504)
.+... .+... + .-.....+++++++..|+++... |+.++.
T Consensus 370 -~G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 370 -QGRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp -TSEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -CCcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 44332 22211 0 01257899999965555555443 666554
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.54 E-value=3.7e-05 Score=79.39 Aligned_cols=239 Identities=15% Similarity=0.143 Sum_probs=144.1
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccCcc----cee-EEEEeeC---CC-EEEEEe------CCCcEEEEeCCCCCC
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK----KVT-SVKFVTE---GD-LFLTGS------ADKTVRVWQGSEDGN 299 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~----~v~-~l~~s~~---~~-~l~s~s------~dg~i~iwd~~~~~~ 299 (504)
+..++.++.|+.|..+|..+|+.+..+..... .+. .-....+ ++ .+++++ .+|.|..+|..++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~- 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE- 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC-
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC-
Confidence 56778888999999999999998876653221 111 1111111 22 566654 37899999988763
Q ss_pred cceeEEeccCC----------------------------------------c-CeEEEEEccCCCEEEEEeC--------
Q 010669 300 YDCKHTLKDHT----------------------------------------A-EVQAVTVHATNKYFVTASL-------- 330 (504)
Q Consensus 300 ~~~~~~~~~h~----------------------------------------~-~v~~l~~~p~~~~l~s~s~-------- 330 (504)
.+-...... + .-..+++.|....++.++.
T Consensus 196 --~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 196 --EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp --EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred --EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 222211100 0 0013456666677776653
Q ss_pred ------------C----CeEEEEECCCCeEEEEeecCCCC-----CCCCCeEEEEEC-CCCC---EEEEEeCCCcEEEEE
Q 010669 331 ------------D----NTWCFYDLSSGICLTQVSDAGTD-----GRPEGYTSAAFH-PDGL---ILGTGTSEALVKIWD 385 (504)
Q Consensus 331 ------------d----g~i~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~-pdg~---~l~~g~~dg~I~iwd 385 (504)
| +.|.-+|..+|+.+..+...... ....++ -+... .+|+ .++.++.+|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 58999999999988877532111 011122 22222 4674 788899999999999
Q ss_pred cCCCceeeeeeCCC------------C-C--------------------------------eEEEEEcCCCcEEEEEe--
Q 010669 386 VKSQANVAKFDGHV------------G-A--------------------------------VTAISFSENGYYLATAA-- 418 (504)
Q Consensus 386 ~~~~~~~~~~~~~~------------~-~--------------------------------i~~l~~s~~g~~l~s~~-- 418 (504)
..+++.+..+.... + + -..++++|+...+++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 99998876554321 0 0 01346666544444432
Q ss_pred -------------------------------CCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc--E
Q 010669 419 -------------------------------HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--I 464 (504)
Q Consensus 419 -------------------------------~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--i 464 (504)
.++ |..||+.+++.+....... ++..-.....+.++++++.| +
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagglvf~g~~dg~l 509 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL---PLWAGVLATAGNLVFTGTGDGYF 509 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS---CCCSCCEEETTTEEEEECTTSEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC---CCcccceEeCCCEEEEECCCCcE
Confidence 135 9999999998877665432 22211122346778888887 8
Q ss_pred EEEEeeccCccceeEEEccC
Q 010669 465 RVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 465 ~vw~~~~~~~~~~~i~~~~~ 484 (504)
+.||. ++++.+-.++.
T Consensus 510 ~A~D~----~tG~~lW~~~~ 525 (582)
T 1flg_A 510 KAFDA----KSGKELWKFQT 525 (582)
T ss_dssp EEEET----TTCCEEEEEEC
T ss_pred EEEEC----CCCCEEEEecC
Confidence 88887 66777776655
No 284
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.54 E-value=8e-08 Score=74.20 Aligned_cols=53 Identities=21% Similarity=0.364 Sum_probs=48.0
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhc-CCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDY-GKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+||+...+||+|++.+|.+|+..+ .+||+++.+++.++|+..
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~ 76 (100)
T 3lrq_A 23 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNC 76 (100)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEEC
T ss_pred CCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhh
Confidence 46999999999999933599999999999999988 489999999999998876
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.53 E-value=0.00017 Score=65.58 Aligned_cols=204 Identities=14% Similarity=0.205 Sum_probs=129.1
Q ss_pred EcccCccceeEEEEeeCCCE-EEEEeCCCcEEEEeCCCCCCcceeEEec-cCCcCeEEEEEccCCCEEEEEeCCCeEEEE
Q 010669 260 TLSGHSKKVTSVKFVTEGDL-FLTGSADKTVRVWQGSEDGNYDCKHTLK-DHTAEVQAVTVHATNKYFVTASLDNTWCFY 337 (504)
Q Consensus 260 ~~~~h~~~v~~l~~s~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~l~s~s~dg~i~iw 337 (504)
.+.+-...+..++|+|+++. +++...++.|...|.. + .....+. +-....-.|++.+++.++++.-.++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g---~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G---DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C---CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C---CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEE
Confidence 45566678999999997664 5557778888888887 3 4444442 222567889999888877776677899999
Q ss_pred ECCCCeE---EEEeecC-CCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC---CCceeeeee-------CCCCCeE
Q 010669 338 DLSSGIC---LTQVSDA-GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVK---SQANVAKFD-------GHVGAVT 403 (504)
Q Consensus 338 d~~~~~~---~~~~~~~-~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~---~~~~~~~~~-------~~~~~i~ 403 (504)
++..... ....... .....+.....++|+|+++.|.++.......+|.+. ....+..+. .+...+.
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 8876542 2222211 112345668999999988777776665555555553 111122221 1234678
Q ss_pred EEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcceeeeecCCC-------CCCeeEEEECCCCCEEEEEeCcEEEEEe
Q 010669 404 AISFSENGYYLATAAH-DG-VKLWDLRKLKNFRSFESSDS-------ETPTNSVDFDHSGSYLAVASADIRVYQV 469 (504)
Q Consensus 404 ~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~~~~~~~~~~-------~~~v~~i~~~~~g~~l~~~~~di~vw~~ 469 (504)
.++++|....|+.-++ .. +.++|.. ++.+..+..... ......|+|+++|+..++ ++.-.+|.+
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 9999996544444444 45 8899965 555555554321 135689999999985555 544355555
No 286
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.53 E-value=5.6e-08 Score=68.35 Aligned_cols=52 Identities=19% Similarity=0.393 Sum_probs=47.5
Q ss_pred CccccCCCCCCCc-------eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEP-------VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+| ++. .+||+|.+.+|++|++.+.+||+++.+++.++++++
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 62 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVST-ECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI 62 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEE-TTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCEEEC
T ss_pred CCCCccChhhhCccccCCCEEeC-CCCCchhHHHHHHHHHcCCCCCCCCccCCccceeee
Confidence 3699999998887 677 499999999999999999999999999999999876
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.00013 Score=78.39 Aligned_cols=266 Identities=11% Similarity=0.072 Sum_probs=158.6
Q ss_pred CCCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc--------------cCccceeEEEEeeCCCEEEEEeCCCc
Q 010669 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS--------------GHSKKVTSVKFVTEGDLFLTGSADKT 288 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------~h~~~v~~l~~s~~~~~l~s~s~dg~ 288 (504)
...|.++...++|.+.+ |+..+-|.++|..++....... .....|.++...++|. |-.|+.++-
T Consensus 257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 35699999888776544 5554558888887654322111 1345688998888776 455666677
Q ss_pred EEEEeCCCCCCcceeEE-------eccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeE
Q 010669 289 VRVWQGSEDGNYDCKHT-------LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361 (504)
Q Consensus 289 i~iwd~~~~~~~~~~~~-------~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 361 (504)
|..|+..... +..... .......|.++...++|. |..|+.++-|..||..++.... +... .......|.
T Consensus 335 l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~~~-~~~~~~~v~ 410 (781)
T 3v9f_A 335 INFISNAPPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIY-NKEN-RELLSNSVL 410 (781)
T ss_dssp EEEECSSCCS-CEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEEC-C------CCCSBEE
T ss_pred EEEeCCCCCc-ceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEE-ccCC-CCCCCcceE
Confidence 8888876531 111110 011235689998887766 4556666778999987553322 1110 112345789
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeee--CCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecC
Q 010669 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD--GHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESS 439 (504)
Q Consensus 362 ~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~--~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~ 439 (504)
++...++|.+.+ |+.++-|..||.++++...... .....|.++...++|.+.+. +.+||..||..+++........
T Consensus 411 ~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 411 CSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-THAGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ETTEEEEEESSSSSCCEEECTT
T ss_pred EEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-ECCceEEEeCCCCeEEecccCc
Confidence 999988887555 6666678899987665332211 13457999999888875554 4577999998876543322111
Q ss_pred ---CCCCCeeEEEECCCCCEEEEEeCc-EEEEEeeccCccceeEEEccCCC--CCCceeEEEEeecCc
Q 010669 440 ---DSETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFPDLS--GTGAASFLFLFVLGQ 501 (504)
Q Consensus 440 ---~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~~~~~~~~~~~i~~~~~h~--~~~~v~~l~~~~~g~ 501 (504)
.....|.++..+++|.+.+....+ +..|+. .. ..+..+.... ....|.++...++|.
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~----~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP----DM-QLVRKFNQYEGFCSNTINQIYRSSKGQ 551 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEEEESSSCEEEECT----TC-CEEEEECTTTTCSCSCEEEEEECTTSC
T ss_pred ccccccceeEEEEEcCCCCEEEEEcCCCEEEEeC----CC-CeEEEccCCCCCCCCeeEEEEECCCCC
Confidence 013578999999999877655434 777764 11 1222332110 134567776666654
No 288
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=4.3e-08 Score=69.39 Aligned_cols=48 Identities=19% Similarity=0.297 Sum_probs=43.8
Q ss_pred ccccCCCCCCCceEeCCCCeeeeHHHHHHHHH-hcCCCCCCCCCCCCCcc
Q 010669 2 NCSISGEVPEEPVVSKNSGLLFEKRLIERHIL-DYGKCPVTGEPLTMDDI 50 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~ 50 (504)
.|+|+.+.+.+||+++ +||+|.+.+|.+|+. .+.+||+++.+++.+++
T Consensus 17 ~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 17 KCEKCHLVLCSPKQTE-CGHRFCESCMAALLSSSSPKCTACQESIVKDKV 65 (66)
T ss_dssp ECTTTCCEESSCCCCS-SSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTTC
T ss_pred CCCCCChHhcCeeECC-CCCHHHHHHHHHHHHhCcCCCCCCCcCCChhhc
Confidence 5999999999999985 999999999999995 45689999999998876
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.50 E-value=0.00015 Score=71.92 Aligned_cols=236 Identities=11% Similarity=0.110 Sum_probs=135.7
Q ss_pred CeEEEEeccC--CCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCC---C-cEEEEeCCCCC
Q 010669 225 GIVSLDIHYS--KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD---K-TVRVWQGSEDG 298 (504)
Q Consensus 225 ~I~~~~~s~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d---g-~i~iwd~~~~~ 298 (504)
.-..++|+|+ +..|+.+...+.|+.++..++....... .......++|+++|+++++.... . .+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~-- 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS-- 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG--
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC--
Confidence 3568899984 4445444444889999988776654433 44568999999999944443321 1 133333222
Q ss_pred CcceeEEeccCCcCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE-EEEEe
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI-LGTGT 376 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~-l~~g~ 376 (504)
.+.....+. .......++++| ++.++++-..++.|+.+|..++.....+... +....-..++|+|+|+. +++-.
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~---~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM---DTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC---SCCSSCEEEEECTTSSEEEEEET
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc---CCCCCcccEEEeCCCCEEEEEeC
Confidence 111111121 223456788999 6666666666789999999877653333211 11123357999999984 45555
Q ss_pred CCCcEEEEEcCC--Cce--eeeeeCC---------------CCCeEEEEE---------cCCCcEEEEEeCCc-EEEEEc
Q 010669 377 SEALVKIWDVKS--QAN--VAKFDGH---------------VGAVTAISF---------SENGYYLATAAHDG-VKLWDL 427 (504)
Q Consensus 377 ~dg~I~iwd~~~--~~~--~~~~~~~---------------~~~i~~l~~---------s~~g~~l~s~~~d~-v~vwd~ 427 (504)
..+.|+.+|+.. +.. ...+.+. -.....+++ .++|.++++-..+. |+.++.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 678899988652 221 1122111 124677999 66776666655555 999985
Q ss_pred CCCcceeeeecCC----------------CCCCeeEEEECCCCCEEEEEeC-c--EEEEEe
Q 010669 428 RKLKNFRSFESSD----------------SETPTNSVDFDHSGSYLAVASA-D--IRVYQV 469 (504)
Q Consensus 428 ~~~~~~~~~~~~~----------------~~~~v~~i~~~~~g~~l~~~~~-d--i~vw~~ 469 (504)
++. +.++.... .-.....|+++|....|+++.. + |+.+++
T Consensus 373 -~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 373 -EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp -TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 443 23332210 0124678999944444444443 3 666554
No 290
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.50 E-value=1.1e-05 Score=85.11 Aligned_cols=213 Identities=14% Similarity=0.219 Sum_probs=135.7
Q ss_pred CCcEEEEcCCCCceEEEcccC---c----------------------------cceeEEEEeeCCCEEEEEeCCCc----
Q 010669 244 DTNAVLFDRPSGQIVTTLSGH---S----------------------------KKVTSVKFVTEGDLFLTGSADKT---- 288 (504)
Q Consensus 244 dg~i~vwd~~~~~~~~~~~~h---~----------------------------~~v~~l~~s~~~~~l~s~s~dg~---- 288 (504)
+|.|+.||..+|+.+..+... . .....+++.++..+++.++.++.
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999988776421 0 01124678887788888877763
Q ss_pred ---------------EEEEeCCCCCCcceeEEec--cCC-------cCeEEEEEccCCC---EEEEEeCCCeEEEEECCC
Q 010669 289 ---------------VRVWQGSEDGNYDCKHTLK--DHT-------AEVQAVTVHATNK---YFVTASLDNTWCFYDLSS 341 (504)
Q Consensus 289 ---------------i~iwd~~~~~~~~~~~~~~--~h~-------~~v~~l~~~p~~~---~l~s~s~dg~i~iwd~~~ 341 (504)
|..+|..++ +.+-.++ .|. .+.....+..+|+ .++.++.+|.++++|..+
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG---~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTG---KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTC---CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred CCCCCCCCCceeeeeEEEEcCCCC---ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 899999886 3333332 222 2233333334665 688999999999999999
Q ss_pred CeEEEEeecCCC---------CCC---------C-------------CCeEEEEECCCCCEEEEEe--------------
Q 010669 342 GICLTQVSDAGT---------DGR---------P-------------EGYTSAAFHPDGLILGTGT-------------- 376 (504)
Q Consensus 342 ~~~~~~~~~~~~---------~~~---------~-------------~~v~~~~~~pdg~~l~~g~-------------- 376 (504)
|+.+........ .+. . ..-..++++|+..++++..
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 413 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDF 413 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGC
T ss_pred CCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccc
Confidence 998754432110 000 0 0011367888766665421
Q ss_pred ----------------------CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcce
Q 010669 377 ----------------------SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNF 433 (504)
Q Consensus 377 ----------------------~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~ 433 (504)
.+|.|..||+.+++.+-.+..+ .+.....+...|.+++.++.++ |++||.++++.+
T Consensus 414 ~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 414 VTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 2378999999999987776533 2333334444677888888888 999999999999
Q ss_pred eeeecCCCCCCeeEEEECCCCC-EEEEEe
Q 010669 434 RSFESSDSETPTNSVDFDHSGS-YLAVAS 461 (504)
Q Consensus 434 ~~~~~~~~~~~v~~i~~~~~g~-~l~~~~ 461 (504)
..+..... ....-+.+..+|+ |+++++
T Consensus 493 ~~~~~~~~-~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 493 WQFEAQSG-IVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEECSSC-CCSCCEEEEETTEEEEEEEE
T ss_pred eEecCCCC-cccCceEEEECCEEEEEEEe
Confidence 88876421 1112344445665 565554
No 291
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.49 E-value=1.2e-07 Score=78.88 Aligned_cols=47 Identities=19% Similarity=0.263 Sum_probs=43.4
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC-CCCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG-KCPVTGEPLTMD 48 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~ 48 (504)
+.|+|+.+++.+||++| +||+|++.||.+|+.... +||+++.++..+
T Consensus 79 ~~C~IC~~~~~~pv~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQPVTTE-CFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSSEEECT-TSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcCCEEcC-CCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 46999999999999996 999999999999999765 799999999977
No 292
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.49 E-value=1e-07 Score=76.20 Aligned_cols=52 Identities=35% Similarity=0.483 Sum_probs=47.4
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC-CCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG-KCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+++.+||+++ +||+|++.+|.+|+..++ +||+++.+++.+++++-
T Consensus 19 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 71 (118)
T 3hct_A 19 YECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 71 (118)
T ss_dssp GBCTTTCSBCSSEEECT-TSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEEC
T ss_pred CCCCcCChhhcCeEECC-cCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccC
Confidence 36999999999999996 999999999999999887 89999999998887654
No 293
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.48 E-value=8.4e-08 Score=69.01 Aligned_cols=52 Identities=19% Similarity=0.393 Sum_probs=47.2
Q ss_pred CccccCCCCCCCc-------eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEP-------VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+| ++. .+||+|.+.+|.+|++.+.+||+++.+++.++++++
T Consensus 11 ~~C~IC~~~~~~~~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 69 (71)
T 3ng2_A 11 VSCPICMDGYSEIVQNGRLIVST-ECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI 69 (71)
T ss_dssp CBCTTTCCBHHHHHTTTCCEEEC-TTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSCCCC
T ss_pred CCCcccChhhhccccccCCeEeC-CCCChHhHHHHHHHHHcCCCCCCCCCccChhheeec
Confidence 3699999999888 666 599999999999999999999999999999998876
No 294
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=1.6e-07 Score=69.45 Aligned_cols=45 Identities=22% Similarity=0.391 Sum_probs=42.2
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
+.|+|+.+.+.+||++| +||+|++.+|.+|++.+.+||+++.++.
T Consensus 16 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 16 FRCFICRQAFQNPVVTK-CRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp SBCSSSCSBCCSEEECT-TSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCcCCCchhcCeeEcc-CCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 46999999999999985 9999999999999999889999999986
No 295
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.48 E-value=0.00017 Score=69.33 Aligned_cols=205 Identities=10% Similarity=-0.003 Sum_probs=127.3
Q ss_pred CeEEEEeccCCCEE-EEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeC-CCEEEEEeCCCcEEEEeCCCCCCcce
Q 010669 225 GIVSLDIHYSKDVI-ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDGNYDC 302 (504)
Q Consensus 225 ~I~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~~~~~~~~ 302 (504)
....++|++.+..| ++-...+.|..++...+.....+.........+++.+. +.++++-...+.|.+.+..... .
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~ 150 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---R 150 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---C
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc---e
Confidence 47899999766554 44456788999998766544444333345678999874 4455555667889999987531 2
Q ss_pred eEEeccCCcCeEEEEEccCCCEEEEEeC-C-CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE-EEeCCC
Q 010669 303 KHTLKDHTAEVQAVTVHATNKYFVTASL-D-NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG-TGTSEA 379 (504)
Q Consensus 303 ~~~~~~h~~~v~~l~~~p~~~~l~s~s~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~-~g~~dg 379 (504)
...+...-.....++++|.+..|+.+.. . +.|..+++.......... ..-.....++++|++..|. +-...+
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----~~~~~PnGla~d~~~~~lY~aD~~~~ 225 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-----THLFWPNGLTIDYAGRRMYWVDAKHH 225 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-----SSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-----CCCCCcceEEEeCCCCEEEEEECCCC
Confidence 2222233355789999997666555543 4 788888887543322221 1123578999998655554 445567
Q ss_pred cEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeec
Q 010669 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 380 ~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~ 438 (504)
.|..+|+........+.........+++. ++.++++-...+ |..+|..+++....+..
T Consensus 226 ~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 226 VIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 89999986443332333334567788883 444444443444 88888767766665543
No 296
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.48 E-value=0.00011 Score=71.72 Aligned_cols=206 Identities=10% Similarity=-0.006 Sum_probs=128.5
Q ss_pred CCeEEEEeccCCCE-EEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCC-CEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 224 PGIVSLDIHYSKDV-IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 224 ~~I~~~~~s~~~~~-l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~-~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
.....++|++.+.. +++-...+.|..++...+.....+.........+++.+.+ .++++-...+.|.+.++... .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---~ 192 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---H 192 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC---S
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---c
Confidence 35788999976554 4555567889999987665444443333456788888754 44555556778888887653 1
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeC-C-CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE-EEEeCC
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASL-D-NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL-GTGTSE 378 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l-~~g~~d 378 (504)
....+.........++++|.+..|+.+.. . +.|..+++.......... ..-.....++|+|++..| ++-...
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-----THLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-----CCCCCeeeEEEeCCCCEEEEEECCC
Confidence 22222233356789999997776666554 3 688888887544333222 112357899999855544 454566
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeec
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~ 438 (504)
+.|..+|+........+.........|++. .+.++++-...+ |..+|..+++....+..
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 268 HVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp TEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 789999986443333333334467788883 444444444445 88898777776666654
No 297
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.47 E-value=1.8e-07 Score=70.05 Aligned_cols=52 Identities=27% Similarity=0.489 Sum_probs=47.5
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh------cCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILD------YGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+||+.| +||+|++.+|.+|+.. ..+||+++.+++.++|.+-
T Consensus 20 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecw_A 20 VTCPICLELLKEPVSAD-CNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPN 77 (85)
T ss_dssp TSCTTTCSCCSSCEECT-TSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEEC
T ss_pred CCCcCCChhhCcceeCC-CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcC
Confidence 36999999999999996 9999999999999998 5679999999999888765
No 298
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.46 E-value=1.6e-07 Score=75.79 Aligned_cols=46 Identities=17% Similarity=0.236 Sum_probs=42.1
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC-CCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG-KCPVTGEPLTM 47 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~ 47 (504)
+.|+|+.+++.+||+.| +||+|++.+|.+|+..++ +||+++.+++.
T Consensus 53 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVFRPITTV-CQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCSSEEECT-TSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHcCcEEee-CCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 46999999999999996 999999999999999665 79999999876
No 299
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.46 E-value=0.00017 Score=68.46 Aligned_cols=214 Identities=9% Similarity=0.049 Sum_probs=125.1
Q ss_pred CCcEEEEcCCCCc--eEEEcccCccceeEEEEeeCC-CEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEcc
Q 010669 244 DTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEG-DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320 (504)
Q Consensus 244 dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~s~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p 320 (504)
...|+.+++.... ....+. ....+..+.|.+.+ .++.+-...+.|..+++..... ....+...-....++++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~--~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--VQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC--CCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc--eEEEEcCCCCCccEEEEEc
Confidence 4568888887653 222222 23456789999854 4555555678899998876421 1111222223466788887
Q ss_pred CCC-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCceeeeeeC
Q 010669 321 TNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT--SEALVKIWDVKSQANVAKFDG 397 (504)
Q Consensus 321 ~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~--~dg~I~iwd~~~~~~~~~~~~ 397 (504)
.+. ++++-...+.|.++++.......... ........++++|.+..|+... ..+.|..+++...........
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-----~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC-----SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEe-----CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC
Confidence 554 44555567899999987654332221 1124578999999655555444 357888888753322222222
Q ss_pred CCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEe
Q 010669 398 HVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQV 469 (504)
Q Consensus 398 ~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~ 469 (504)
.-...+.|+|++++..|+.+... + |..+|+... ....+.. ........++++. ..++..... |..++.
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~-~~~~~P~glav~~--~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVK-GSLPHPFALTLFE--DILYWTDWSTHSILACNK 236 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEC-SCCSCEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEec-CCCCCceEEEEeC--CEEEEEecCCCeEEEEEC
Confidence 23467899999977777776655 4 999998643 3333322 1134567788753 344444433 555553
No 300
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.43 E-value=1.5e-07 Score=77.52 Aligned_cols=45 Identities=20% Similarity=0.301 Sum_probs=42.1
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
+.|+|+.+.+.+||+.| +||+|++.+|.+|+..+.+||+++.++.
T Consensus 54 ~~C~iC~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLN-CAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp SBCTTTCSBCSSEEEET-TSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred CCCcccCcccCCceECC-CCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 36999999999999997 9999999999999999999999998875
No 301
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=9.6e-08 Score=68.64 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=47.3
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+||+.| +||+|.+.+|.+|+..+.+||+++.++..++|+.-
T Consensus 16 ~~C~IC~~~~~~~~~~~-CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~p 67 (71)
T 2d8t_A 16 PECAICLQTCVHPVSLP-CKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDSG 67 (71)
T ss_dssp CBCSSSSSBCSSEEEET-TTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHHSCS
T ss_pred CCCccCCcccCCCEEcc-CCCHHHHHHHHHHHHCCCcCcCcCchhCHhhccCC
Confidence 36999999999999996 99999999999999988899999999998877544
No 302
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=1.9e-07 Score=67.50 Aligned_cols=49 Identities=22% Similarity=0.383 Sum_probs=44.0
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh---cCCCCCCCCCCCCCcc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILD---YGKCPVTGEPLTMDDI 50 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~ 50 (504)
+.|+|+.+.+.+||+.| +||+|++.+|.+|++. +.+||+++++++.+++
T Consensus 21 ~~C~IC~~~~~~~~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 72 (73)
T 2ysl_A 21 VICPICLDILQKPVTID-CGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAI 72 (73)
T ss_dssp CBCTTTCSBCSSEEECT-TCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCC
T ss_pred CEeccCCcccCCeEEcC-CCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccC
Confidence 36999999999999995 9999999999999973 4479999999998876
No 303
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.42 E-value=2.5e-07 Score=73.76 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=46.8
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh-cCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILD-YGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+++.+||+++ +||+|++.+|.+|+.. +.+||+++.+++.++|++.
T Consensus 24 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 76 (116)
T 1rmd_A 24 ISCQICEHILADPVETS-CKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESP 76 (116)
T ss_dssp TBCTTTCSBCSSEEECT-TSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCC
T ss_pred CCCCCCCcHhcCcEEcC-CCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhcccc
Confidence 46999999999999995 9999999999999998 5689999999998887643
No 304
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.42 E-value=3.9e-05 Score=79.11 Aligned_cols=218 Identities=13% Similarity=0.099 Sum_probs=133.5
Q ss_pred CEEEEEeC------CCcEEEEcCCCCceEEEcccCccc-------------------------------------e-eEE
Q 010669 236 DVIATGGV------DTNAVLFDRPSGQIVTTLSGHSKK-------------------------------------V-TSV 271 (504)
Q Consensus 236 ~~l~sg~~------dg~i~vwd~~~~~~~~~~~~h~~~-------------------------------------v-~~l 271 (504)
..+++++. +|.|+.+|..+|+.+..+...... + ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 45555554 789999999999988766532110 0 135
Q ss_pred EEeeCCCEEEEEeCC----------------CcEEEEeCCCCCCcceeEEec--cC--------CcCeEEEEEccCCC--
Q 010669 272 KFVTEGDLFLTGSAD----------------KTVRVWQGSEDGNYDCKHTLK--DH--------TAEVQAVTVHATNK-- 323 (504)
Q Consensus 272 ~~s~~~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~~--~h--------~~~v~~l~~~p~~~-- 323 (504)
++.++...++.+..+ +.|..+|..++ +.+-.++ .| ..++. +...++|+
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG---~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~ 316 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTG---MAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMT 316 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTC---CEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCC---cEEEEecCCCCcccccccCCCCEE-EecccCCcEE
Confidence 566655666665532 35889998886 3333332 22 12222 22234674
Q ss_pred -EEEEEeCCCeEEEEECCCCeEEEEeecCCCC--------CCCCCe--------------------------EEEEECCC
Q 010669 324 -YFVTASLDNTWCFYDLSSGICLTQVSDAGTD--------GRPEGY--------------------------TSAAFHPD 368 (504)
Q Consensus 324 -~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--------~~~~~v--------------------------~~~~~~pd 368 (504)
.++.++.+|.++++|..+++.+......... ....++ ..++++|+
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 5778899999999999999988766432100 000011 24678887
Q ss_pred CCEEEEEe-------------------------------------CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCC
Q 010669 369 GLILGTGT-------------------------------------SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411 (504)
Q Consensus 369 g~~l~~g~-------------------------------------~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g 411 (504)
..++++.. .+|.|..||+.+++.+-++... ..+....+...+
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~g 475 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKG 475 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETT
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECC
Confidence 77776653 3578999999999887776532 222222223345
Q ss_pred cEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEE
Q 010669 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459 (504)
Q Consensus 412 ~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~ 459 (504)
..++.++.++ |+.||.++++.+..+..... .....+.+..+|+.++.
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~-~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKMPSG-GIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEEEETTEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeCCCC-cEeeeEEEEECCEEEEE
Confidence 6677788888 99999999999988876431 11122345566654443
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.39 E-value=0.00087 Score=71.36 Aligned_cols=225 Identities=7% Similarity=-0.039 Sum_probs=132.7
Q ss_pred EEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCC-cceeEEeccCCcCeE
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGN-YDCKHTLKDHTAEVQ 314 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~ 314 (504)
+|+.+. ...|+..++........+. ....+..++|.+.+. ++++-...+.|+.+++..... ......+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444433 3467778877655444444 345678999998544 455555667888888865211 011222332334567
Q ss_pred EEEEccCCCEEEE-EeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CC-CcEEEEEcCCCce
Q 010669 315 AVTVHATNKYFVT-ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SE-ALVKIWDVKSQAN 391 (504)
Q Consensus 315 ~l~~~p~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~d-g~I~iwd~~~~~~ 391 (504)
.|++.+.+..|+. -...+.|.+.++........+. ........|+++|.+..|+... .+ +.|...++.....
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-----~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~ 549 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 549 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-----CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence 8899877755554 4557899999998665433332 1123578999999654444443 33 7899999864443
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEE
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQ 468 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~ 468 (504)
...+...-...+.|++++.+..|+.+... . |..+|+........+...........|++ .+.+|+..... -+|+.
T Consensus 550 ~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 550 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEE
Confidence 33333334578999999877777777655 3 99999865443333332211233456666 44577766655 55555
Q ss_pred ee
Q 010669 469 VA 470 (504)
Q Consensus 469 ~~ 470 (504)
++
T Consensus 628 ~d 629 (791)
T 3m0c_C 628 AN 629 (791)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 306
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=2.7e-07 Score=69.00 Aligned_cols=52 Identities=21% Similarity=0.364 Sum_probs=47.2
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh------cCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILD------YGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+|++.| +||+|++.+|.+|+.. ..+||+++.+++.++|.+-
T Consensus 20 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecv_A 20 VTCPICLELLTQPLSLD-CGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPN 77 (85)
T ss_dssp CCCTTTCSCCSSCBCCS-SSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCS
T ss_pred CCCCCCCcccCCceeCC-CCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCcc
Confidence 46999999999999996 9999999999999998 6789999999999887654
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.37 E-value=0.00016 Score=68.21 Aligned_cols=193 Identities=15% Similarity=0.260 Sum_probs=126.3
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeC----CC---EEEEEe-C--CCcEEEEeCCCCCCccee
Q 010669 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE----GD---LFLTGS-A--DKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 234 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~----~~---~l~s~s-~--dg~i~iwd~~~~~~~~~~ 303 (504)
...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+ ++++.. . +++|.+|++.... ..+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~--~~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN--GTL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--CCE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--Cce
Confidence 4456666677788999999 7998888864 56777777663 22 233333 3 5799999774211 123
Q ss_pred EEecc------CC-cCeEEEEE--ccC-CC-EEEEEeCCCeEEEEECC-------CCeEEEEeecCCCCCCCCCeEEEEE
Q 010669 304 HTLKD------HT-AEVQAVTV--HAT-NK-YFVTASLDNTWCFYDLS-------SGICLTQVSDAGTDGRPEGYTSAAF 365 (504)
Q Consensus 304 ~~~~~------h~-~~v~~l~~--~p~-~~-~l~s~s~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~v~~~~~ 365 (504)
..+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.+..+.. ...+..|..
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l------gsq~Egcvv 187 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM------NSQTEGMAA 187 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC------SSCEEEEEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC------CCCcceEEE
Confidence 33311 11 45677777 664 43 68888889999999883 2344555542 246888999
Q ss_pred CCCCCEEEEEeCCCcEEEEEcC-----CCceeeeee-CC-CCCeEEEEEc--CCCc-EEEEEeCC-c-EEEEEcC-CCcc
Q 010669 366 HPDGLILGTGTSEALVKIWDVK-----SQANVAKFD-GH-VGAVTAISFS--ENGY-YLATAAHD-G-VKLWDLR-KLKN 432 (504)
Q Consensus 366 ~pdg~~l~~g~~dg~I~iwd~~-----~~~~~~~~~-~~-~~~i~~l~~s--~~g~-~l~s~~~d-~-v~vwd~~-~~~~ 432 (504)
.+....|+++-++.-|..||.. +++.+..+. ++ ...+..|++. ++|. ||++++.+ + +.+||.. +.+.
T Consensus 188 Dd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 188 DDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp ETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred cCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence 9988899999998778777854 234454442 22 2368888884 4554 66666644 3 9999996 5666
Q ss_pred eeeee
Q 010669 433 FRSFE 437 (504)
Q Consensus 433 ~~~~~ 437 (504)
+..|.
T Consensus 268 vg~f~ 272 (355)
T 3amr_A 268 VADFR 272 (355)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66664
No 308
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.36 E-value=0.0008 Score=63.65 Aligned_cols=204 Identities=9% Similarity=-0.026 Sum_probs=124.4
Q ss_pred CCeEEEEeccCCCE-EEEEeCCCcEEEEcCCC----CceEEEcccCccceeEEEEeeCC-CEEEEEeCCCcEEEEeCCCC
Q 010669 224 PGIVSLDIHYSKDV-IATGGVDTNAVLFDRPS----GQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 224 ~~I~~~~~s~~~~~-l~sg~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~l~~s~~~-~~l~s~s~dg~i~iwd~~~~ 297 (504)
.....++|++.++. +++-..++.|..+++.. ......+.........+++.+.+ ++.++-...+.|.+++....
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 35679999987654 45555678899999875 22222233233456889998644 44555567789999998753
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC--CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE-
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD--NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT- 374 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~- 374 (504)
.....+.........++++|.+..++.+... +.|..+++..... ..+.. ..-.....+++++++..|+.
T Consensus 110 ---~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~----~~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 110 ---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT----ENIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp ---SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEEC----SSCSCEEEEEEETTTTEEEEE
T ss_pred ---ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEE----CCCCCceEEEEeccCCEEEEE
Confidence 1222222233567899999977766665543 6888888865433 22221 11245789999987655554
Q ss_pred EeCCCcEEEEEcCCCceeeee-e--CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeee
Q 010669 375 GTSEALVKIWDVKSQANVAKF-D--GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 375 g~~dg~I~iwd~~~~~~~~~~-~--~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~ 437 (504)
-...+.|..+|+... ....+ . ........+++. .+.++++-...+ |..+|..+++....+.
T Consensus 182 D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 182 DSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp ETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred ECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 445679999998643 22222 2 122456788885 344444444445 9999987777665554
No 309
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.35 E-value=4.4e-07 Score=77.26 Aligned_cols=47 Identities=17% Similarity=0.254 Sum_probs=42.6
Q ss_pred ccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh-cCCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLLFEKRLIERHILD-YGKCPVTGEPLTMD 48 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~ 48 (504)
.|+|+.+.+.+||+.+.+||+|++.||++|+.. +.+||+++.++...
T Consensus 56 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 103 (165)
T 2ckl_B 56 MCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 103 (165)
T ss_dssp BCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSG
T ss_pred CCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCc
Confidence 699999999999998569999999999999997 67899999998643
No 310
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.35 E-value=4.1e-07 Score=71.39 Aligned_cols=48 Identities=17% Similarity=0.201 Sum_probs=44.1
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMD 48 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 48 (504)
+.|+|+.+++.+||+...+||+|++.+|.+|+..+.+||+++.++...
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp TBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 469999999999999845999999999999999988999999998865
No 311
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.35 E-value=6.8e-08 Score=71.19 Aligned_cols=52 Identities=21% Similarity=0.377 Sum_probs=46.7
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh-------cCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILD-------YGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+.+.+||+.| +||+|++.+|.+|+.. ..+||+++.+++.++|.+-
T Consensus 13 ~~C~IC~~~~~~p~~l~-CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n 71 (79)
T 2egp_A 13 VTCPICLELLTEPLSLD-CGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQAN 71 (79)
T ss_dssp CEETTTTEECSSCCCCS-SSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTC
T ss_pred CCCcCCCcccCCeeECC-CCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcC
Confidence 46999999999999996 9999999999999987 5679999999999887654
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.35 E-value=0.00013 Score=69.78 Aligned_cols=171 Identities=10% Similarity=0.126 Sum_probs=101.7
Q ss_pred CCCcEEEEeCCCCC-CcceeEEecc-----CCcCeEEEEEcc--CCC-EEEEEeC---CCeEEEEECCCCe-EEEEeecC
Q 010669 285 ADKTVRVWQGSEDG-NYDCKHTLKD-----HTAEVQAVTVHA--TNK-YFVTASL---DNTWCFYDLSSGI-CLTQVSDA 351 (504)
Q Consensus 285 ~dg~i~iwd~~~~~-~~~~~~~~~~-----h~~~v~~l~~~p--~~~-~l~s~s~---dg~i~iwd~~~~~-~~~~~~~~ 351 (504)
.+|.|.++|..+.. ....+ .+.+ .......+.+.+ ++. +|+++.. +.+|.+|+++... ....+...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 68899999987421 11222 2222 234677888866 343 4544432 4577887765432 22212111
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEe-----------------CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEE
Q 010669 352 GTDGRPEGYTSAAFHPDGLILGTGT-----------------SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414 (504)
Q Consensus 352 ~~~~~~~~v~~~~~~pdg~~l~~g~-----------------~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l 414 (504)
....-...+.+.+.++|.++++.. ..|.|..||. ++ +..+...-...+.++|+||++.|
T Consensus 160 -~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 160 -RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp -CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEE
T ss_pred -ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEE
Confidence 112234678999999999877754 1245655655 32 22222233467899999999988
Q ss_pred EEEeCC-c-EEEEEcCC-Ccc--eeeeecCCCCCCeeEEEECC-CCCEEEEEeCc
Q 010669 415 ATAAHD-G-VKLWDLRK-LKN--FRSFESSDSETPTNSVDFDH-SGSYLAVASAD 463 (504)
Q Consensus 415 ~s~~~d-~-v~vwd~~~-~~~--~~~~~~~~~~~~v~~i~~~~-~g~~l~~~~~d 463 (504)
+.+... . |..||+.. +.. ...+.. ....-.+++++ +|++.+++..+
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~~~---~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVLSF---DTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEEC---SSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEEeC---CCCCceEEEeCCCCcEEEEecCC
Confidence 887655 3 99999863 222 223322 35678899999 59988877645
No 313
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.34 E-value=0.0011 Score=65.08 Aligned_cols=207 Identities=10% Similarity=-0.012 Sum_probs=128.1
Q ss_pred CCCeEEEEeccCCCEEE-EEeCCCcEEEEcCCCC----ceEEEcccCccceeEEEEee-CCCEEEEEeCCCcEEEEeCCC
Q 010669 223 KPGIVSLDIHYSKDVIA-TGGVDTNAVLFDRPSG----QIVTTLSGHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 223 ~~~I~~~~~s~~~~~l~-sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~s~-~~~~l~s~s~dg~i~iwd~~~ 296 (504)
...+..++|++.+..|+ +-...+.|+.+++... .....+.........+++.+ .+++.++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 34678999998666554 4445678888887652 23333333445678899987 455555656778899998875
Q ss_pred CCCcceeEEeccCCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
. .....+.........|+++|.+.+|+.+.. .+.|...++.......... ..-.....+++++++..|+.
T Consensus 191 ~---~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-----~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 191 V---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp C---SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEE
T ss_pred C---ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-----CCCCceEEEEEEeCCCEEEE
Confidence 3 222222233345789999997776666653 3689999887554333322 11245789999986665555
Q ss_pred E-eCCCcEEEEEcCCCceeeeeeC--CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeec
Q 010669 375 G-TSEALVKIWDVKSQANVAKFDG--HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 375 g-~~dg~I~iwd~~~~~~~~~~~~--~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~ 438 (504)
+ ...+.|..+|+........... .......+++. .+.++++-...+ |..+|..+++.+..+..
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred EECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 5 4567899999865433222222 23355677773 333444443444 99999878877666654
No 314
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=8.9e-07 Score=66.62 Aligned_cols=54 Identities=17% Similarity=0.374 Sum_probs=48.0
Q ss_pred CccccCCCCCCC----ceEeCCCCeeeeHHHHHHHHHhc---CCCCCCCCCCCCCccccccC
Q 010669 1 MNCSISGEVPEE----PVVSKNSGLLFEKRLIERHILDY---GKCPVTGEPLTMDDIVPIKT 55 (504)
Q Consensus 1 ~~c~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~ 55 (504)
+.|+|+.+.+.+ |++.+ +||+|.+.+|.+|++.+ .+||++++++..+++..+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~l~~ 76 (88)
T 2ct2_A 16 LECPICMESFTEEQLRPKLLH-CGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQLTD 76 (88)
T ss_dssp CBCTTTCCBCCTTSSCEEECS-SSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTTSEE
T ss_pred CCCccCCccccccCCCeEECC-CCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHHHHH
Confidence 469999999999 99996 99999999999999986 68999999999888766644
No 315
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.33 E-value=2.1e-05 Score=82.83 Aligned_cols=236 Identities=11% Similarity=0.092 Sum_probs=131.3
Q ss_pred eEEEEeccCCCEEEEEeC-CCcEEEEcCCCCceEEEcccCcc-ceeEEEEeeCCCEEEEEe-CC-----CcEEEEeCCCC
Q 010669 226 IVSLDIHYSKDVIATGGV-DTNAVLFDRPSGQIVTTLSGHSK-KVTSVKFVTEGDLFLTGS-AD-----KTVRVWQGSED 297 (504)
Q Consensus 226 I~~~~~s~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~s~~~~~l~s~s-~d-----g~i~iwd~~~~ 297 (504)
..++++..++.+++.|+. ++.+.+||..+.+-...-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 345677789999999984 45799999877654332221211 123455567899988888 44 56899998763
Q ss_pred CCcceeEEe--ccCCcCeEEEEEccCCCEEEEEeCCC---------eEEEEECCCCeEEEEeecCCC----CCCCCCeEE
Q 010669 298 GNYDCKHTL--KDHTAEVQAVTVHATNKYFVTASLDN---------TWCFYDLSSGICLTQVSDAGT----DGRPEGYTS 362 (504)
Q Consensus 298 ~~~~~~~~~--~~h~~~v~~l~~~p~~~~l~s~s~dg---------~i~iwd~~~~~~~~~~~~~~~----~~~~~~v~~ 362 (504)
.+..+... ......-....+..++..++.++.+| .+..||..+............ ......-.+
T Consensus 325 -~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 325 -TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp -EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred -cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence 22221000 00000000011223455555565443 567888887764433221100 001112344
Q ss_pred EEECC-CCCEEEEEeCCC-----------cEEEEEcCCCceeeee--eCCCCC-eEEEEEcCCCcEEEEEeCC-------
Q 010669 363 AAFHP-DGLILGTGTSEA-----------LVKIWDVKSQANVAKF--DGHVGA-VTAISFSENGYYLATAAHD------- 420 (504)
Q Consensus 363 ~~~~p-dg~~l~~g~~dg-----------~I~iwd~~~~~~~~~~--~~~~~~-i~~l~~s~~g~~l~s~~~d------- 420 (504)
+.|.. +++++++|+.++ .|.+||..+..-.... ..+... -.++...++|++++.|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~ 483 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCC
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCC
Confidence 55543 788889988543 6788888765433222 112222 2345667899999998743
Q ss_pred ----c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeC
Q 010669 421 ----G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462 (504)
Q Consensus 421 ----~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~ 462 (504)
. +.+||..+.+-...-.............+.++|++++.||.
T Consensus 484 ~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 484 STPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 3 89999876543221111111223344567799999999985
No 316
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.30 E-value=9.3e-05 Score=76.37 Aligned_cols=218 Identities=17% Similarity=0.195 Sum_probs=132.2
Q ss_pred EEEEEe------CCCcEEEEcCCCCceEEEcccCccce-----------------------------------------e
Q 010669 237 VIATGG------VDTNAVLFDRPSGQIVTTLSGHSKKV-----------------------------------------T 269 (504)
Q Consensus 237 ~l~sg~------~dg~i~vwd~~~~~~~~~~~~h~~~v-----------------------------------------~ 269 (504)
.+++++ .+|.|+.+|..+|+.+.........+ .
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 566654 37899999999998876553211000 1
Q ss_pred EEEEeeCCCEEEEEeC--------------------C----CcEEEEeCCCCCCcceeEEec--cCC--------cCeEE
Q 010669 270 SVKFVTEGDLFLTGSA--------------------D----KTVRVWQGSEDGNYDCKHTLK--DHT--------AEVQA 315 (504)
Q Consensus 270 ~l~~s~~~~~l~s~s~--------------------d----g~i~iwd~~~~~~~~~~~~~~--~h~--------~~v~~ 315 (504)
.+++.|+..+++.+.. | +.|..+|..++ +.+-.++ .|. .++.
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG---~~~W~~q~~~~d~wd~~~~~~p~l- 325 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSG---EVKWFYQHTPNDAWDFSGNNELVL- 325 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTC---CEEEEEESSTTCCSCCCCCCCCEE-
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCC---CEEEEEeCCCCCcccccCCCCcEE-
Confidence 2456666666666553 2 58999999886 3333332 232 1222
Q ss_pred EEEc-cCCC---EEEEEeCCCeEEEEECCCCeEEEEeecCCCC----------C-------------------CCC----
Q 010669 316 VTVH-ATNK---YFVTASLDNTWCFYDLSSGICLTQVSDAGTD----------G-------------------RPE---- 358 (504)
Q Consensus 316 l~~~-p~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----------~-------------------~~~---- 358 (504)
+... .+|+ .++.++.+|.++++|.++|+.+......... + ...
T Consensus 326 ~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (582)
T 1flg_A 326 FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVS 405 (582)
T ss_dssp EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEES
T ss_pred EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEEC
Confidence 2221 4563 7888999999999999999988765432100 0 000
Q ss_pred -------CeEEEEECCCCCEEEEEe---------------------------------CCCcEEEEEcCCCceeeeeeCC
Q 010669 359 -------GYTSAAFHPDGLILGTGT---------------------------------SEALVKIWDVKSQANVAKFDGH 398 (504)
Q Consensus 359 -------~v~~~~~~pdg~~l~~g~---------------------------------~dg~I~iwd~~~~~~~~~~~~~ 398 (504)
.-..++++|+..++++.. .+|.|..||+.+++.+-+....
T Consensus 406 P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~ 485 (582)
T 1flg_A 406 PPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH 485 (582)
T ss_dssp SCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES
T ss_pred cCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC
Confidence 011456777655554432 2578999999999887666532
Q ss_pred CCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEEE
Q 010669 399 VGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVA 460 (504)
Q Consensus 399 ~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~ 460 (504)
. ++..-.+...+.+++.++.|+ ++.||.++++.+..+..... ....-+.|..+|+ |+++.
T Consensus 486 ~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g-~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 486 L-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG-IVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp S-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CCSCCEEEEETTEEEEEEE
T ss_pred C-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC-cccCceEEEECCEEEEEEE
Confidence 2 222111122456777788888 99999999999988877421 1122356666775 55544
No 317
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.29 E-value=0.00035 Score=65.38 Aligned_cols=201 Identities=9% Similarity=0.120 Sum_probs=124.7
Q ss_pred EEEEeccCCCEEEEEe-CCCcEEEEcCCCCceEEE-ccc----Cc--cceeEEEE---eeCCCEEEEEe-----------
Q 010669 227 VSLDIHYSKDVIATGG-VDTNAVLFDRPSGQIVTT-LSG----HS--KKVTSVKF---VTEGDLFLTGS----------- 284 (504)
Q Consensus 227 ~~~~~s~~~~~l~sg~-~dg~i~vwd~~~~~~~~~-~~~----h~--~~v~~l~~---s~~~~~l~s~s----------- 284 (504)
-+++|++....+..++ ..|+|..|+...+..... +.+ .. ..+..|.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3678988666666665 789999999876544333 322 11 13578999 57877776543
Q ss_pred --CCCcEEEEeCC---CCCCcceeEEeccC-----------CcCeEEEEEccCCCEEEEEeCC-CeEEEEECCCCeEEEE
Q 010669 285 --ADKTVRVWQGS---EDGNYDCKHTLKDH-----------TAEVQAVTVHATNKYFVTASLD-NTWCFYDLSSGICLTQ 347 (504)
Q Consensus 285 --~dg~i~iwd~~---~~~~~~~~~~~~~h-----------~~~v~~l~~~p~~~~l~s~s~d-g~i~iwd~~~~~~~~~ 347 (504)
.+..|..||+. ++.. .....+... ......++..++|+..++++.. +.|..++.........
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~-~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKP-VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCC-SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCE-EEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26779999988 5422 112222211 1248899999999999999988 8888888775533222
Q ss_pred eecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCce--eeeee--CC---CCCeEEE-EEcCCCcEEEEE-e
Q 010669 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN--VAKFD--GH---VGAVTAI-SFSENGYYLATA-A 418 (504)
Q Consensus 348 ~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~--~~~~~--~~---~~~i~~l-~~s~~g~~l~s~-~ 418 (504)
.............+.++++|+|.+|++....|.|..+|++.... +. .. +. -.....| ..-.+|+.|+++ +
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEEEcC
Confidence 21111112234578999999999888887799999999985432 11 11 21 1223443 333477774444 4
Q ss_pred CCc-EEEEEcCC
Q 010669 419 HDG-VKLWDLRK 429 (504)
Q Consensus 419 ~d~-v~vwd~~~ 429 (504)
..+ +.+.+...
T Consensus 254 ~~~~~~l~S~Dg 265 (334)
T 2p9w_A 254 APYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEECSST
T ss_pred CCCEEEEECCCC
Confidence 455 55555443
No 318
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.29 E-value=0.00076 Score=63.84 Aligned_cols=205 Identities=8% Similarity=-0.002 Sum_probs=126.0
Q ss_pred CeEEEEeccCCC-EEEEEeCCCcEEEEcCCCCce-EEEcccCccceeEEEEee-CCCEEEEEeCCCcEEEEeCCCCCCcc
Q 010669 225 GIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQI-VTTLSGHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 225 ~I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~l~~s~-~~~~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
...+++|++.+. ++.+-...+.|..++...+.. ...+...-.....+++.+ .+.++++-...+.|.++++....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--- 112 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--- 112 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---
Confidence 366899998654 555555678899998876532 112222234567888887 44555555667889999987531
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE-EEeCC
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG-TGTSE 378 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~-~g~~d 378 (504)
....+.........++++|.+..|+.+.. .+.|..+++.......... ..-.....+++++++..|. +-...
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-----SEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE-----CCCCCccEEEEeccCCEEEEEECCC
Confidence 11222233456789999997666666653 5788888887543222221 1123568999999655554 44567
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeec
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~ 438 (504)
+.|..+|+..........+.......+++.. +.++.+-...+ |..+|..+++....+..
T Consensus 188 ~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 188 NFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 8899999864332222232345667888853 33444433344 99999887876666544
No 319
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.29 E-value=9.4e-05 Score=76.34 Aligned_cols=212 Identities=13% Similarity=0.125 Sum_probs=129.4
Q ss_pred CCCcEEEEcCCCCceEEEcccCccc-------------------------------------e-eEEEEeeCCCEEEEEe
Q 010669 243 VDTNAVLFDRPSGQIVTTLSGHSKK-------------------------------------V-TSVKFVTEGDLFLTGS 284 (504)
Q Consensus 243 ~dg~i~vwd~~~~~~~~~~~~h~~~-------------------------------------v-~~l~~s~~~~~l~s~s 284 (504)
.+|.|+.+|..+|+.+..+...... + ...++.+...+++.+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3799999999999988766532111 0 1345566667777776
Q ss_pred CC----------------CcEEEEeCCCCCCcceeEEec--cCC--------cCeEEEEEc-cCC---CEEEEEeCCCeE
Q 010669 285 AD----------------KTVRVWQGSEDGNYDCKHTLK--DHT--------AEVQAVTVH-ATN---KYFVTASLDNTW 334 (504)
Q Consensus 285 ~d----------------g~i~iwd~~~~~~~~~~~~~~--~h~--------~~v~~l~~~-p~~---~~l~s~s~dg~i 334 (504)
.+ +.|..+|..++ +..-.++ .|. .++. +... .+| ..++.++.+|.+
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG---~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l 335 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTG---EAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIV 335 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTC---CEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCC---ceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEE
Confidence 55 37889999886 3333332 221 1222 2222 467 567788999999
Q ss_pred EEEECCCCeEEEEeecCCCC--------CCCC--------------------------CeEEEEECCCCCEEEEEe----
Q 010669 335 CFYDLSSGICLTQVSDAGTD--------GRPE--------------------------GYTSAAFHPDGLILGTGT---- 376 (504)
Q Consensus 335 ~iwd~~~~~~~~~~~~~~~~--------~~~~--------------------------~v~~~~~~pdg~~l~~g~---- 376 (504)
+++|.++|+.+......... .... .-..++++|+..++++..
T Consensus 336 ~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~ 415 (599)
T 1w6s_A 336 YTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHIC 415 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEE
T ss_pred EEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccc
Confidence 99999999988766422100 0000 012456777666555431
Q ss_pred -----------------------------------CCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc
Q 010669 377 -----------------------------------SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421 (504)
Q Consensus 377 -----------------------------------~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~ 421 (504)
.+|.|..||+.+++.+-+... ..+...-.+...+.+++.++.|+
T Consensus 416 ~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg 494 (599)
T 1w6s_A 416 MDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDG 494 (599)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTS
T ss_pred eeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCC
Confidence 347899999999988766642 11221111222566777788888
Q ss_pred -EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC-EEEEE
Q 010669 422 -VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVA 460 (504)
Q Consensus 422 -v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~ 460 (504)
++.||.++++.+..+..... ....-+.|..+|+ |+++.
T Consensus 495 ~l~A~D~~tG~~lW~~~l~~g-~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 495 YLKARDSDTGDLLWKFKIPSG-AIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EEEEEETTTCCEEEEEECSSC-CCSCCEEEEETTEEEEEEE
T ss_pred eEEEEECCCCCEEEEeeCCCC-cEeccEEEEeCCEEEEEEE
Confidence 99999999999988876421 1223355556665 45443
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.28 E-value=0.0011 Score=62.93 Aligned_cols=231 Identities=7% Similarity=0.047 Sum_probs=130.9
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcc---cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCc
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS---GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~ 300 (504)
..+.+|.|++ +..++ ++..|.|+. ....|+.-..+. .+.+.+..+.+.+++..++.+ .+|.|.. ..+.+..+
T Consensus 80 ~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW 154 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNW 154 (327)
T ss_dssp CEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSE
T ss_pred ccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCC
Confidence 3688899976 44444 455665544 333344433332 233557888887777666554 4565422 12233344
Q ss_pred ceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCc
Q 010669 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380 (504)
Q Consensus 301 ~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~ 380 (504)
.... ..+...+..+.+.+++.+++.+...+.++-+|- .+.....+.. .....+..+.+.+++.++++ +.+|.
T Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~-~~~G~ 226 (327)
T 2xbg_A 155 QALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNR----TTSRRLHNMGFTPDGRLWMI-VNGGK 226 (327)
T ss_dssp EEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEEC----CSSSCEEEEEECTTSCEEEE-ETTTE
T ss_pred EEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCC----CCCCccceeEECCCCCEEEE-eCCce
Confidence 4332 345567899999998887776654443444442 1222222221 22356889999999887655 46788
Q ss_pred EEEEEcCCCceeeeee-C---CCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecC-CCCCCeeEEEECCCCC
Q 010669 381 VKIWDVKSQANVAKFD-G---HVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESS-DSETPTNSVDFDHSGS 455 (504)
Q Consensus 381 I~iwd~~~~~~~~~~~-~---~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~-~~~~~v~~i~~~~~g~ 455 (504)
+++.+...++....+. + +...+..+.+.+++.+++++..+.| ++....++....+... .....+.++.|.+++.
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~ 305 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ 305 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc
Confidence 8776433243333222 1 2235889999988887777664446 4555555554444321 1124578888875555
Q ss_pred EEEEEeCcEEEEEe
Q 010669 456 YLAVASADIRVYQV 469 (504)
Q Consensus 456 ~l~~~~~di~vw~~ 469 (504)
+++++.+..|+.+
T Consensus 306 -~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 306 -GFILGQKGILLRY 318 (327)
T ss_dssp -EEEECSTTEEEEE
T ss_pred -eEEEcCCceEEEE
Confidence 5555666556655
No 321
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.27 E-value=7.8e-05 Score=79.67 Aligned_cols=192 Identities=11% Similarity=0.081 Sum_probs=111.5
Q ss_pred ceeEEEEe-eCCCEEEEEe-CCC----cEEEEeCCCC-CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC-----CeE
Q 010669 267 KVTSVKFV-TEGDLFLTGS-ADK----TVRVWQGSED-GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-----NTW 334 (504)
Q Consensus 267 ~v~~l~~s-~~~~~l~s~s-~dg----~i~iwd~~~~-~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-----g~i 334 (504)
.+....|| |||++|+.+. .+| +|+++|+.++ ... ...+. .....+.|+|||+.|+....| ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--Ccccc---CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 57889999 9999877443 333 5999999875 311 11111 113468899999888877665 268
Q ss_pred EEEECCCCeE--EEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC---CCcEEEEEcCCCc-ee--eee-eCCCCCeEEE
Q 010669 335 CFYDLSSGIC--LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS---EALVKIWDVKSQA-NV--AKF-DGHVGAVTAI 405 (504)
Q Consensus 335 ~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~---dg~I~iwd~~~~~-~~--~~~-~~~~~~i~~l 405 (504)
.++++.++.. ...+.. ........+.|+|||++|+.... ...|+++|+.++. .. ..+ ........++
T Consensus 250 ~~~~lgt~~~~~~lv~~~----~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEE----HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEETTSCGGGCEEEEEC----CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred EEEECCCCchhcEEEEec----CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 8889887642 222221 11234568899999998887653 3468889998752 12 333 3344556667
Q ss_pred EEcCCCcEEEEEeCC--c---EEEEEcCCCcceee-eecCCCCCCeeEEEECCCCCEEE-EEeCc--EEEEEe
Q 010669 406 SFSENGYYLATAAHD--G---VKLWDLRKLKNFRS-FESSDSETPTNSVDFDHSGSYLA-VASAD--IRVYQV 469 (504)
Q Consensus 406 ~~s~~g~~l~s~~~d--~---v~vwd~~~~~~~~~-~~~~~~~~~v~~i~~~~~g~~l~-~~~~d--i~vw~~ 469 (504)
.|+.++.+++....+ + |..+|+.+...... +..+.....+..+.+. +..|+ +...+ .+||-+
T Consensus 326 ~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 326 QMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEE
T ss_pred eeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEE
Confidence 666555555555543 2 77778765322222 2222212245556654 44554 44444 344443
No 322
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.00091 Score=66.73 Aligned_cols=239 Identities=13% Similarity=0.128 Sum_probs=136.3
Q ss_pred CeEEEEeccC--CCEEEEEeCCCcEEEEcCCCCceEEEcccC---ccceeEEEE-------eeCCCEEEEEeCCC-----
Q 010669 225 GIVSLDIHYS--KDVIATGGVDTNAVLFDRPSGQIVTTLSGH---SKKVTSVKF-------VTEGDLFLTGSADK----- 287 (504)
Q Consensus 225 ~I~~~~~s~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h---~~~v~~l~~-------s~~~~~l~s~s~dg----- 287 (504)
....|+|+|. ++++++-...+.|++.|+.++.....+... ......++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 445555544567888998877665544322 235899999 99999666666544
Q ss_pred --cEEEEeCCCCCCcce---eEEeccCCcCeEEEEEccCC-CEEEEEeCCCeEEEEECC-------CCeE----------
Q 010669 288 --TVRVWQGSEDGNYDC---KHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLS-------SGIC---------- 344 (504)
Q Consensus 288 --~i~iwd~~~~~~~~~---~~~~~~h~~~v~~l~~~p~~-~~l~s~s~dg~i~iwd~~-------~~~~---------- 344 (504)
.|.+++....+.+.. ...+... .....++++|++ .++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 256665444223220 0122111 234577889954 555556677889999997 5543
Q ss_pred -EEEeecCCCCCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcC--CCce--eeeeeCC---C------------CCeE
Q 010669 345 -LTQVSDAGTDGRPEGYTSAAFHPDGLIL-GTGTSEALVKIWDVK--SQAN--VAKFDGH---V------------GAVT 403 (504)
Q Consensus 345 -~~~~~~~~~~~~~~~v~~~~~~pdg~~l-~~g~~dg~I~iwd~~--~~~~--~~~~~~~---~------------~~i~ 403 (504)
...+... ........++|+|+|++| ++-+..+.|+.+|.. .+.. ...+-+. . ....
T Consensus 299 ~~~~l~~~---~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 299 TFKQLFTI---ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp TEEEEEEC---SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred ccceeEec---CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 1121111 112346799999999954 444567889986653 2221 1222211 0 1244
Q ss_pred -EEEEc-------CCCcEEEEEeCCc-EEEEEcCCCcceeeeecCC----------------------CCCCeeEEEECC
Q 010669 404 -AISFS-------ENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD----------------------SETPTNSVDFDH 452 (504)
Q Consensus 404 -~l~~s-------~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~~----------------------~~~~v~~i~~~~ 452 (504)
.++.. ++|.++++-..+. |+.++ .++. +.++-... .-.....|++++
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 45554 4555555444444 99998 3443 33443210 013467899999
Q ss_pred CCCEEEEEeC-c--EEEEEe
Q 010669 453 SGSYLAVASA-D--IRVYQV 469 (504)
Q Consensus 453 ~g~~l~~~~~-d--i~vw~~ 469 (504)
++..|+++.. + |+.+++
T Consensus 454 ~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEC
Confidence 7444444544 3 777776
No 323
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.25 E-value=0.00049 Score=65.00 Aligned_cols=197 Identities=13% Similarity=0.173 Sum_probs=125.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccC----CC---EEEEEeC---CCeEEEEECC--CCe
Q 010669 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT----NK---YFVTASL---DNTWCFYDLS--SGI 343 (504)
Q Consensus 276 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~----~~---~l~s~s~---dg~i~iwd~~--~~~ 343 (504)
...+++.....+-+.+||+.. +.+..+.. +.++.+..-|. |+ ++++... +++|.+|++. ++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G----~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDG----KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTS----CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcCCC----cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 344677677788899999943 55565543 56777777663 22 2333333 5789999773 443
Q ss_pred EEEEeecC--CCCCCCCCeEEEEE--CCC-CC-EEEEEeCCCcEEEEEcC-------CCceeeeeeCCCCCeEEEEEcCC
Q 010669 344 CLTQVSDA--GTDGRPEGYTSAAF--HPD-GL-ILGTGTSEALVKIWDVK-------SQANVAKFDGHVGAVTAISFSEN 410 (504)
Q Consensus 344 ~~~~~~~~--~~~~~~~~v~~~~~--~pd-g~-~l~~g~~dg~I~iwd~~-------~~~~~~~~~~~~~~i~~l~~s~~ 410 (504)
+..+... ........+..+|+ +|. +. ++++...+|.+..|++. +.+.+.+|.. .+.+..+...+.
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~ 190 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDE 190 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETT
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCC
Confidence 4433210 00011145666777 774 44 67888889999999983 3355677763 457888899988
Q ss_pred CcEEEEEeCCc-EEEEEcC-----CCcceeeeecCCCCCCeeEEEE--CCCCC-EEEEEeCc---EEEEEeeccCcccee
Q 010669 411 GYYLATAAHDG-VKLWDLR-----KLKNFRSFESSDSETPTNSVDF--DHSGS-YLAVASAD---IRVYQVASVKADWNC 478 (504)
Q Consensus 411 g~~l~s~~~d~-v~vwd~~-----~~~~~~~~~~~~~~~~v~~i~~--~~~g~-~l~~~~~d---i~vw~~~~~~~~~~~ 478 (504)
...|+.+-++. |..+|.. +.+.+..+........+..|++ .++++ ||++++.. ..||+.. ..++.
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~---~~~~~ 267 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ---GKNKY 267 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS---TTCCE
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC---CCCcE
Confidence 88899998885 8778855 2344444433222346888888 45566 77777643 9999972 25666
Q ss_pred EEEcc
Q 010669 479 IKTFP 483 (504)
Q Consensus 479 i~~~~ 483 (504)
+..|.
T Consensus 268 vg~f~ 272 (355)
T 3amr_A 268 VADFR 272 (355)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77663
No 324
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.23 E-value=7.2e-07 Score=62.71 Aligned_cols=52 Identities=19% Similarity=0.363 Sum_probs=44.3
Q ss_pred CccccCCC-CCCCc----eEeCCCCeeeeHHHHHHHHHhc-CCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGE-VPEEP----VVSKNSGLLFEKRLIERHILDY-GKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+ ...+| |++ .+||+|.+.+|++|+.++ .+||+++++++.+++++.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 61 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQ 61 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEEC-TTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCEEE
T ss_pred CcCCcCCCCccCCCccCeecC-CCCCHhHHHHHHHHHHcCCCcCCCCCCccccccceee
Confidence 36999999 77777 456 599999999999998754 579999999999998765
No 325
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.21 E-value=9.7e-07 Score=75.57 Aligned_cols=52 Identities=35% Similarity=0.483 Sum_probs=47.1
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC-CCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG-KCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+++.+||.++ +||+|++.+|.+|+...+ +||+++.+++.+++++.
T Consensus 19 ~~C~IC~~~~~~pv~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~ 71 (170)
T 3hcs_A 19 YECPICLMALREAVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD 71 (170)
T ss_dssp GBCTTTCSBCSSEEECT-TSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEEC
T ss_pred CCCCCCChhhcCcEECC-CCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhh
Confidence 46999999999999995 999999999999999776 89999999998887654
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.19 E-value=0.00042 Score=66.72 Aligned_cols=226 Identities=10% Similarity=0.025 Sum_probs=122.4
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCce--EEEcc---cCccceeEEEEeeC---CCEEEEEeC-C-----CcEE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI--VTTLS---GHSKKVTSVKFVTE---GDLFLTGSA-D-----KTVR 290 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~---~h~~~v~~l~~s~~---~~~l~s~s~-d-----g~i~ 290 (504)
.-..++|.|+|+++++ ..+|.|.+++ +++. +..+. ........++|+|+ +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4578999999996555 5669999998 3432 22221 22356889999998 444444433 2 5677
Q ss_pred EEeCCCCC--Cccee-EEec---cCCcCeEEEEEccCCCEEEEEeC-------------CCeEEEEECCCCe--------
Q 010669 291 VWQGSEDG--NYDCK-HTLK---DHTAEVQAVTVHATNKYFVTASL-------------DNTWCFYDLSSGI-------- 343 (504)
Q Consensus 291 iwd~~~~~--~~~~~-~~~~---~h~~~v~~l~~~p~~~~l~s~s~-------------dg~i~iwd~~~~~-------- 343 (504)
.|+...+. ..+.+ ..+. ........++|.|+|.++++.+. .|.|.-+|....-
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 77765421 01111 1122 11112368999999976666432 2456666654310
Q ss_pred ----EEEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeCCCcE------EEEEcCCCc------------------eeee
Q 010669 344 ----CLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTSEALV------KIWDVKSQA------------------NVAK 394 (504)
Q Consensus 344 ----~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~dg~I------~iwd~~~~~------------------~~~~ 394 (504)
....+.. ++ .....++|+| +|.++++-...+.+ .|.-+..+. ++..
T Consensus 189 ~~~~~~~i~a~----G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 189 RRGARPEVYSL----GH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp CTTSCTTEEEE----CC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred CCCCCccEEEE----cC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 0000000 11 2256789999 67766654433331 122222221 2223
Q ss_pred eeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcc------eeeeecCCCCCCeeEEEECCCCCEEEEEeC
Q 010669 395 FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN------FRSFESSDSETPTNSVDFDHSGSYLAVASA 462 (504)
Q Consensus 395 ~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~------~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~ 462 (504)
+. +......++| .+|.++++.-..+ |...++..... ...+.. ....+..+++.|||.+.++...
T Consensus 264 ~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 264 WP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp CT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEECS
T ss_pred cC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEeC
Confidence 32 2335677888 4676665554455 87777764431 122211 1357899999999987776543
No 327
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.16 E-value=1.3e-05 Score=84.59 Aligned_cols=240 Identities=8% Similarity=-0.049 Sum_probs=131.6
Q ss_pred CCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEE-eCCCcEEEEeCCCCCC-cceeEEeccCCcCeEEEEEccC
Q 010669 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTG-SADKTVRVWQGSEDGN-YDCKHTLKDHTAEVQAVTVHAT 321 (504)
Q Consensus 244 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~~p~ 321 (504)
.+.|++.++...+....+.. ...+..++|++.+..|+.+ ...+.|+.+++..... ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 45678888876655444433 3457789999866655554 4567899998865100 0111111111223456788754
Q ss_pred C-CEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CC-CcEEEEEcCCCceeeeeeCC
Q 010669 322 N-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SE-ALVKIWDVKSQANVAKFDGH 398 (504)
Q Consensus 322 ~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~d-g~I~iwd~~~~~~~~~~~~~ 398 (504)
+ +++++-...+.|.++++........+. ........++++|.+..|+... .. +.|.++++........+...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-----~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~ 538 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFR-----EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 538 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECC-----CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEe-----CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC
Confidence 4 444444557889999988654433332 1113457789999655444433 22 78888877533222122222
Q ss_pred CCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeec-CCCCCCeeEEEECCCCCEEEEEeCc---EEEEEeecc
Q 010669 399 VGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD---IRVYQVASV 472 (504)
Q Consensus 399 ~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~-~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~~~ 472 (504)
-...+.|+|++++..|+.+... . |.++|+.... ...+.. .........|+++.+ .|+..... |..++.
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~--- 612 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANR--- 612 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEET---
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEc---
Confidence 3456789999976666666544 4 9999986432 222221 111233455666544 45544433 666664
Q ss_pred CccceeEEEccCCCCCCceeEEEEee
Q 010669 473 KADWNCIKTFPDLSGTGAASFLFLFV 498 (504)
Q Consensus 473 ~~~~~~i~~~~~h~~~~~v~~l~~~~ 498 (504)
.+++.+..+... ....++|.++.
T Consensus 613 -~~G~~~~~i~~~--~~~P~~i~v~~ 635 (699)
T 1n7d_A 613 -LTGSDVNLLAEN--LLSPEDMVLFH 635 (699)
T ss_dssp -TTEEEEECCCTT--CSSCCCCCBCS
T ss_pred -cCCCceEEeecC--CCCCcEEEEeC
Confidence 456666666432 23455555553
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.15 E-value=0.0015 Score=61.05 Aligned_cols=239 Identities=13% Similarity=0.166 Sum_probs=123.3
Q ss_pred CCCEEEEEe-CC-----CcEEEEcCCCCceEEEcccC-ccceeEEEEeeCCCEEEEEeCC-----CcEEEEeCCCCCC--
Q 010669 234 SKDVIATGG-VD-----TNAVLFDRPSGQIVTTLSGH-SKKVTSVKFVTEGDLFLTGSAD-----KTVRVWQGSEDGN-- 299 (504)
Q Consensus 234 ~~~~l~sg~-~d-----g~i~vwd~~~~~~~~~~~~h-~~~v~~l~~s~~~~~l~s~s~d-----g~i~iwd~~~~~~-- 299 (504)
++.+++.|+ .+ ..+.+||..+.+-.. +... .......+...++.+++.|+.+ ..+.+||..+...
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF-LPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe-CCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 345666666 32 368889987765322 2211 1111111222367777777755 4688999877421
Q ss_pred cceeEEeccCCcCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 300 ~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
+..+..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...-... .......++.+ ++++++.
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~--~~~iyv~ 165 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ---TAREGAGLVVA--SGVIYCL 165 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS---SCCBSCEEEEE--TTEEEEE
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC---CCcccceEEEE--CCEEEEE
Confidence 4443333222222222222 57777777654 36889999887644332211 11112222222 6778888
Q ss_pred EeCC-----CcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeCC------cEEEEEcCCCcceeeeecCCC
Q 010669 375 GTSE-----ALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAHD------GVKLWDLRKLKNFRSFESSDS 441 (504)
Q Consensus 375 g~~d-----g~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~d------~v~vwd~~~~~~~~~~~~~~~ 441 (504)
|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ .+.+||+.+.+-...-.....
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred CCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 8754 4688999876532 2222211112223333 67777777653 289999987653222111111
Q ss_pred CCCeeEEEECCCCCEEEEEeCc-----EEEEEeeccCccceeEEEccC
Q 010669 442 ETPTNSVDFDHSGSYLAVASAD-----IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 442 ~~~v~~i~~~~~g~~l~~~~~d-----i~vw~~~~~~~~~~~i~~~~~ 484 (504)
......+.+ ++.+++.|+.+ -.+|.++.....|..+..++.
T Consensus 244 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 289 (301)
T 2vpj_A 244 RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGT 289 (301)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEE
T ss_pred ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCc
Confidence 112222333 56677777643 234444444577988876653
No 329
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.14 E-value=2.3e-06 Score=59.68 Aligned_cols=40 Identities=25% Similarity=0.366 Sum_probs=35.2
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhc---CCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDY---GKCPVT 41 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~ 41 (504)
+.|+|+.+.+.+||+.| +||+|.+.+|++|++.+ .+||++
T Consensus 21 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 21 VICPICLDILQKPVTID-CGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CBCTTTCSBCSSCEECT-TSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CCCCcCCchhCCeEEeC-CCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 46999999999999995 99999999999999953 368874
No 330
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.13 E-value=1.6e-06 Score=61.83 Aligned_cols=44 Identities=18% Similarity=0.394 Sum_probs=40.1
Q ss_pred ccccCCCCCCCc-------eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEP-------VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
.|+|+.+.+.+| ++. .+||+|.+.+|.+|+..+.+||+++.+++
T Consensus 17 ~C~IC~~~~~~~~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 17 SCPICMDGYSEIVQNGRLIVST-ECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCTTTCCCHHHHTTTTCCEEEC-SSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCcccCccccccccccCCeEeC-CCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 599999998887 777 49999999999999999999999999876
No 331
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.11 E-value=0.0019 Score=68.83 Aligned_cols=204 Identities=9% Similarity=-0.043 Sum_probs=123.9
Q ss_pred CCeEEEEeccCCC-EEEEEeCCCcEEEEcCCCC----ceEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCC
Q 010669 224 PGIVSLDIHYSKD-VIATGGVDTNAVLFDRPSG----QIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSED 297 (504)
Q Consensus 224 ~~I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~ 297 (504)
..+..++|++.+. ++++-...+.|+.+++... .....+.........|++.+.+. ++++-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 4567888888554 4455555677888887642 22333333445677899987664 4555566789999998753
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g 375 (504)
.....+.........|+++|.+.+|+.+.. .+.|...++........+. ..-.....|++++.+..|+.+
T Consensus 504 ---~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-----~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 504 ---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp ---SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-----SSCSCEEEEEEETTTTEEEEE
T ss_pred ---eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-----CCCCCceEEEEecCCCeEEEE
Confidence 222222233345889999998776666653 2689999987654433332 112467899999865555544
Q ss_pred -eCCCcEEEEEcCCCceeeeeeC--CCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeee
Q 010669 376 -TSEALVKIWDVKSQANVAKFDG--HVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 376 -~~dg~I~iwd~~~~~~~~~~~~--~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~ 437 (504)
...+.|..+|+........+.. .-.....|++. +.+|+..... + |...|..+++.+..+.
T Consensus 576 D~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 576 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred eCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 4567899999865433333332 12345567764 3355555544 4 8888877776555543
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.11 E-value=0.0039 Score=58.40 Aligned_cols=234 Identities=12% Similarity=0.108 Sum_probs=121.9
Q ss_pred CEEEEEeC--CCcEEEEcCCCCceEEE--cccCccceeEEEEeeCCCEEEEEeCC----CcEEEEeCCCCCCcceeEEec
Q 010669 236 DVIATGGV--DTNAVLFDRPSGQIVTT--LSGHSKKVTSVKFVTEGDLFLTGSAD----KTVRVWQGSEDGNYDCKHTLK 307 (504)
Q Consensus 236 ~~l~sg~~--dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~ 307 (504)
.+++.|+. ...+.+||..+++-... +......-..+. -++.+++.|+.+ ..+.+||..+. .+..+..+.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTT-EEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCC-eEEECCCCC
Confidence 35555654 35688899877653321 111111112222 367777777754 56888998773 343333332
Q ss_pred cCCcCeEEEEEccCCCEEEEEeCC------CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC----
Q 010669 308 DHTAEVQAVTVHATNKYFVTASLD------NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS---- 377 (504)
Q Consensus 308 ~h~~~v~~l~~~p~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~---- 377 (504)
........+.+ ++..++.|+.+ ..+.+||..+..-...-. .........++.+ ++.+++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS---MLTQRCSHGMVEA--NGLIYVCGGSLGNN 162 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEEEECCEESCT
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC---CcCCcceeEEEEE--CCEEEEECCCCCCC
Confidence 21122222222 67777777765 458999998876443321 1111112222222 6677777764
Q ss_pred -----CCcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC------cEEEEEcCCCcceeeeecCCCCCC
Q 010669 378 -----EALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD------GVKLWDLRKLKNFRSFESSDSETP 444 (504)
Q Consensus 378 -----dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d------~v~vwd~~~~~~~~~~~~~~~~~~ 444 (504)
-..+.+||+.+.+ .+..+......-..+.+ ++++++.|+.+ .+.+||+.+.+-...-..+.....
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 240 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT 240 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSC
T ss_pred CcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccc
Confidence 3458899987763 22222211112222333 66777776542 389999987542221111111122
Q ss_pred eeEEEECCCCCEEEEEeCc-------EEEEEeeccCccceeEEEccCC
Q 010669 445 TNSVDFDHSGSYLAVASAD-------IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 445 v~~i~~~~~g~~l~~~~~d-------i~vw~~~~~~~~~~~i~~~~~h 485 (504)
...+.+ ++.+++.|+.+ +.+||. ....|..+..++..
T Consensus 241 ~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~ 284 (306)
T 3ii7_A 241 VKCAAV--GSIVYVLAGFQGVGRLGHILEYNT--ETDKWVANSKVRAF 284 (306)
T ss_dssp CEEEEE--TTEEEEEECBCSSSBCCEEEEEET--TTTEEEEEEEEECC
T ss_pred eeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC--CCCeEEeCCCcccc
Confidence 233333 66777777742 555554 45779998877643
No 333
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.07 E-value=7.9e-07 Score=70.82 Aligned_cols=50 Identities=24% Similarity=0.381 Sum_probs=44.1
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCcccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVP 52 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 52 (504)
+.|+|+.+++.+||+.+.+||+|++.+|.+|+. .+||+++.++...+|.+
T Consensus 23 ~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~~ 72 (117)
T 1jm7_B 23 LRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLKI 72 (117)
T ss_dssp TSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCCC
T ss_pred CCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCccccccc
Confidence 469999999999999844999999999999998 78999999987766643
No 334
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.07 E-value=3.4e-06 Score=61.71 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=44.2
Q ss_pred ccccCCCCCCCc---eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 2 NCSISGEVPEEP---VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 2 ~c~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
.|+|+.+.+.+| ++.| +||+|.+.+|.+|++.+.+||+++.+++..++.+.
T Consensus 17 ~C~IC~~~~~~~~~~~~~~-C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 70 (78)
T 2ect_A 17 ECPVCKEDYALGESVRQLP-CNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATN 70 (78)
T ss_dssp CCTTTTSCCCTTSCEEECT-TSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSCCC
T ss_pred CCeeCCccccCCCCEEEeC-CCCeecHHHHHHHHHcCCcCcCcCCccCCcccCCC
Confidence 599999887765 4454 99999999999999999999999999998888665
No 335
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.05 E-value=0.0042 Score=59.67 Aligned_cols=227 Identities=13% Similarity=0.069 Sum_probs=124.5
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCc-eEEEcc---cCccceeEEEEeeC---CCEEEEEeC----C----CcE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ-IVTTLS---GHSKKVTSVKFVTE---GDLFLTGSA----D----KTV 289 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~-~~~~~~---~h~~~v~~l~~s~~---~~~l~s~s~----d----g~i 289 (504)
.-..++|.|+|+++++ ..+|.|++++. +++ .+..+. ........|+|+|+ +..|+.+.. + +.|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4678999999985554 56699999973 454 222221 22345889999997 444444432 2 567
Q ss_pred EEEeCCCCC-Cc---cee-EEec-cCCcCeEEEEEccCCCEEEEEeC-------------CCeEEEEECCCC--------
Q 010669 290 RVWQGSEDG-NY---DCK-HTLK-DHTAEVQAVTVHATNKYFVTASL-------------DNTWCFYDLSSG-------- 342 (504)
Q Consensus 290 ~iwd~~~~~-~~---~~~-~~~~-~h~~~v~~l~~~p~~~~l~s~s~-------------dg~i~iwd~~~~-------- 342 (504)
..|+..... .. +.+ ..+. ........+.|.|+|.++++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 777765421 11 111 1122 11112467999999987766432 245555555421
Q ss_pred -eEEEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeCCC---cEEEEEcCC--------C--------ceeeeeeCCCCC
Q 010669 343 -ICLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTSEA---LVKIWDVKS--------Q--------ANVAKFDGHVGA 401 (504)
Q Consensus 343 -~~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~dg---~I~iwd~~~--------~--------~~~~~~~~~~~~ 401 (504)
..+... ++ .....++|+| +|.++++-...+ .|.+..... + .++..+......
T Consensus 188 ~~~i~a~------G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 188 NSPIWSY------GH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp TCCEEEE------CC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCcEEEE------cc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 011111 11 2346799999 677666543322 233322100 0 122333112346
Q ss_pred eEEEEEc-------CCCcEEEEEeCCc-EEEEEcCCC-cce--eeeecCCCCCCeeEEEECCCCCEEEEEe
Q 010669 402 VTAISFS-------ENGYYLATAAHDG-VKLWDLRKL-KNF--RSFESSDSETPTNSVDFDHSGSYLAVAS 461 (504)
Q Consensus 402 i~~l~~s-------~~g~~l~s~~~d~-v~vwd~~~~-~~~--~~~~~~~~~~~v~~i~~~~~g~~l~~~~ 461 (504)
...++|. .+|.++++.-..+ |...++... ... ..+.. .....+..+++.|||.+.++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECCCCcEEEEEe
Confidence 7888884 4676666655555 888888753 221 12211 1135789999999997666654
No 336
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.04 E-value=5.6e-06 Score=58.67 Aligned_cols=45 Identities=24% Similarity=0.314 Sum_probs=40.7
Q ss_pred ccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
.|+|+.+.+.+|++...+||+|.+.+|.+|++.+.+||+++.+++
T Consensus 7 ~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 599999999998555469999999999999999999999999886
No 337
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.00 E-value=1.3e-06 Score=71.72 Aligned_cols=49 Identities=12% Similarity=0.145 Sum_probs=43.0
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcC-CCCCCCCCCCCCcc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYG-KCPVTGEPLTMDDI 50 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~ 50 (504)
+.|+|+.+++.+||.++ +||+|++.+|.+|+...+ +||+++.++..++.
T Consensus 32 ~~C~IC~~~~~~pv~~~-CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 81 (141)
T 3knv_A 32 YLCSACRNVLRRPFQAQ-CGHRYCSFCLASILSSGPQNCAACVHEGIYEEG 81 (141)
T ss_dssp GBCTTTCSBCSSEEECT-TSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTT
T ss_pred cCCCCCChhhcCcEECC-CCCccCHHHHHHHHhcCCCCCCCCCCccccccc
Confidence 46999999999999995 999999999999998776 79999988766543
No 338
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.99 E-value=4.5e-06 Score=56.33 Aligned_cols=46 Identities=13% Similarity=0.272 Sum_probs=41.0
Q ss_pred ccccCCCCCCC---ceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEE---PVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.+ +++.|.+||+|.+.+|.+|++.+.+||+++.++.+
T Consensus 7 ~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~v 55 (55)
T 1iym_A 7 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVV 55 (55)
T ss_dssp CCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSCC
T ss_pred cCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeEC
Confidence 59999998777 78777799999999999999999999999988763
No 339
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.99 E-value=3.1e-06 Score=69.15 Aligned_cols=54 Identities=19% Similarity=0.362 Sum_probs=48.9
Q ss_pred CccccCCCCCCCc-------eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccccC
Q 010669 1 MNCSISGEVPEEP-------VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKT 55 (504)
Q Consensus 1 ~~c~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 55 (504)
+.|+|+.+.+.+| |+. .+||+|.+.+|.+|++.+.+||+++++++..++.++..
T Consensus 8 ~~C~IC~~~~~~~~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l~i 68 (133)
T 4ap4_A 8 VSCPICMDGYSEIVQNGRLIVST-ECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 68 (133)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEE-TTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCEEECBC
T ss_pred CCCcccChhhhCccccccCeEec-CCCChhhHHHHHHHHHhCCCCCCCCCcCcccccccccc
Confidence 4699999999998 777 59999999999999999999999999999999988743
No 340
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.93 E-value=0.0037 Score=58.44 Aligned_cols=163 Identities=12% Similarity=0.173 Sum_probs=107.9
Q ss_pred CccceeEEEEeeCCCEEEEEe-CCCcEEEEeCCCCCCcceeEEecc----CC--cCeEEEEE---ccCCCEEEEEeC---
Q 010669 264 HSKKVTSVKFVTEGDLFLTGS-ADKTVRVWQGSEDGNYDCKHTLKD----HT--AEVQAVTV---HATNKYFVTASL--- 330 (504)
Q Consensus 264 h~~~v~~l~~s~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~----h~--~~v~~l~~---~p~~~~l~s~s~--- 330 (504)
...---++.|++....|..++ ..|+|..||...+. ...+ .+.+ .. ..+..+.| .|++.++++...
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC-EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe-EEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 334456789987555555555 79999999987532 1122 2322 11 13589999 688777775442
Q ss_pred ----------CCeEEEEECC---CCeEEEEeecCCCC-C-------CCCCeEEEEECCCCCEEEEEeCC-CcEEEEEcCC
Q 010669 331 ----------DNTWCFYDLS---SGICLTQVSDAGTD-G-------RPEGYTSAAFHPDGLILGTGTSE-ALVKIWDVKS 388 (504)
Q Consensus 331 ----------dg~i~iwd~~---~~~~~~~~~~~~~~-~-------~~~~v~~~~~~pdg~~l~~g~~d-g~I~iwd~~~ 388 (504)
+..+..||+. +++.+......... + .......++..++|+..++++.. +.|..++...
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 6789999999 77766554311000 0 11357899999999999999888 8887777643
Q ss_pred Cceeeeee------CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCC
Q 010669 389 QANVAKFD------GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 429 (504)
Q Consensus 389 ~~~~~~~~------~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~ 429 (504)
. .+..+. ......+.|+++|+|+.|++....+ +..+|+.+
T Consensus 169 ~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 K-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp C-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred C-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3 333221 1122477999999999888887777 99999884
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.92 E-value=0.0051 Score=57.72 Aligned_cols=237 Identities=10% Similarity=0.138 Sum_probs=122.5
Q ss_pred ccCCCEEEEEeCC----CcEEEEcCCCCceEEEcccC-ccc-eeEEEEeeCCCEEEEEeC----C-----CcEEEEeCCC
Q 010669 232 HYSKDVIATGGVD----TNAVLFDRPSGQIVTTLSGH-SKK-VTSVKFVTEGDLFLTGSA----D-----KTVRVWQGSE 296 (504)
Q Consensus 232 s~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~h-~~~-v~~l~~s~~~~~l~s~s~----d-----g~i~iwd~~~ 296 (504)
.-++.+++.|+.+ ..+.+||..+.+-.. +... ... -.+++ .-++.+++.|+. + ..+.+||..+
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLR-LADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeE-CCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 3456777777742 368889987665332 2111 111 11222 226677777765 2 4678888876
Q ss_pred CCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE
Q 010669 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~ 371 (504)
. .+..+..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...-. .........++.+ ++.+
T Consensus 100 ~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~i 171 (308)
T 1zgk_A 100 N-QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP---MLTRRIGVGVAVL--NRLL 171 (308)
T ss_dssp T-EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE--TTEE
T ss_pred C-eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC---CCccccceEEEEE--CCEE
Confidence 3 33333222221112222222 56777777643 358899998875433221 1111122223333 6778
Q ss_pred EEEEeCC-----CcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----c-EEEEEcCCCcceeeeec
Q 010669 372 LGTGTSE-----ALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAHD-----G-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 372 l~~g~~d-----g~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~~~~~~~~ 438 (504)
++.|+.+ ..+.+||+.+.+- +..+......-..+.+ ++.+++.|+.+ . +.+||+.+.+-...-..
T Consensus 172 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 172 YAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp EEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred EEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 8887754 4588999876532 2122211122233333 67777777643 3 89999987543221111
Q ss_pred CCCCCCeeEEEECCCCCEEEEEeCc-------EEEEEeeccCccceeEEEccC
Q 010669 439 SDSETPTNSVDFDHSGSYLAVASAD-------IRVYQVASVKADWNCIKTFPD 484 (504)
Q Consensus 439 ~~~~~~v~~i~~~~~g~~l~~~~~d-------i~vw~~~~~~~~~~~i~~~~~ 484 (504)
.........+.+ ++.+++.|+.+ +.+||. ....|..+..++.
T Consensus 250 p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~ 298 (308)
T 1zgk_A 250 KHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP--DTDTWSEVTRMTS 298 (308)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET--TTTEEEEEEECSS
T ss_pred CCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC--CCCEEeecCCCCC
Confidence 111112222222 56677777643 555555 4578998877654
No 342
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.92 E-value=0.022 Score=59.15 Aligned_cols=219 Identities=10% Similarity=0.034 Sum_probs=132.1
Q ss_pred EEEEEeCCCcEEEEcCCCCceEEEcc-cCccceeEEEEeeCCCEEE-EEeCCCcEEEEeCCCCCCcceeEEeccCCcCeE
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVTTLS-GHSKKVTSVKFVTEGDLFL-TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 314 (504)
+|+.+ ....|+..++.+......+. ..-..+..++|++.+..|+ +-..++.|..+++.... ....+........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~---~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA---LEHVVEFGLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCCC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC---cEEEEeCCCCCcc
Confidence 44443 45678888887665433332 2234688999998655554 55567889888886532 2222222224567
Q ss_pred EEEEccCCCEEEE-EeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC-CCEEEEE-eCCCcEEEEEcCCCce
Q 010669 315 AVTVHATNKYFVT-ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD-GLILGTG-TSEALVKIWDVKSQAN 391 (504)
Q Consensus 315 ~l~~~p~~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd-g~~l~~g-~~dg~I~iwd~~~~~~ 391 (504)
.+++.+.+..|+. -...+.|.+.++........+. . .-.....++++|. |.++.+- +..+.|...++.....
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-~----~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-K----DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-S----SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-C----CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 8888876555544 4456789999987654322221 1 1235789999995 5444443 2357888888754433
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc-EEEEE
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQ 468 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d-i~vw~ 468 (504)
..+...-...+.|++++++..|+.+... + |..+|+..... ..+... ......+++.. ..|+..... -.|+.
T Consensus 159 -~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~--l~~P~glav~~--~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 159 -TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD--LPHPFGLTQYQ--DYIYWTDWSRRSIER 232 (628)
T ss_dssp -EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC--CSCEEEEEEET--TEEEEEETTTTEEEE
T ss_pred -EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc--CCCceEEEEEC--CEEEEecCCCCEEEE
Confidence 2332344578899999987777777665 4 99999875433 333222 23456788764 456655544 44444
Q ss_pred ee
Q 010669 469 VA 470 (504)
Q Consensus 469 ~~ 470 (504)
++
T Consensus 233 ~d 234 (628)
T 4a0p_A 233 AN 234 (628)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 343
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.00044 Score=68.57 Aligned_cols=152 Identities=14% Similarity=0.167 Sum_probs=97.3
Q ss_pred ceeEEEEee-CCCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC-C----eEEEEECC
Q 010669 267 KVTSVKFVT-EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-N----TWCFYDLS 340 (504)
Q Consensus 267 ~v~~l~~s~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-g----~i~iwd~~ 340 (504)
....++|+| ++..|+.+...+.|+.+|.... .+..+.........++|++++++|+++... + .+.+++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~----~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE----YVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT----EEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC----EEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 457899997 3555666655588999998763 233333344568899999999966666542 2 34444433
Q ss_pred CCeE-EEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeeeee-CCCCCeEEEEEcCCCcEEEEE
Q 010669 341 SGIC-LTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTSEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGYYLATA 417 (504)
Q Consensus 341 ~~~~-~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~dg~I~iwd~~~~~~~~~~~-~~~~~i~~l~~s~~g~~l~s~ 417 (504)
.... ...+.. ......++++| +|.++++-..++.|..||...+.....+. +.......++|+|+|.+|+.+
T Consensus 214 g~~~~~~~l~~------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 214 SGFKVITELTK------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp GTSCSEEEEEE------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred Cceeeeeeecc------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 2211 112211 12456788999 78877777788999999987665422222 122457899999999977666
Q ss_pred eCC-c-EEEEEcC
Q 010669 418 AHD-G-VKLWDLR 428 (504)
Q Consensus 418 ~~d-~-v~vwd~~ 428 (504)
... . |..++..
T Consensus 288 d~~~~~I~~~~~d 300 (430)
T 3tc9_A 288 VVNQHYILRSDYD 300 (430)
T ss_dssp ETTTTEEEEEEEE
T ss_pred ECCCCEEEEEeCC
Confidence 554 4 8888765
No 344
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.92 E-value=1.2e-05 Score=54.25 Aligned_cols=44 Identities=23% Similarity=0.368 Sum_probs=38.3
Q ss_pred ccccCCCCCCC----ceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 2 NCSISGEVPEE----PVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
.|+|+.+.+.+ +++. .+||+|.+.+|.+|++.+.+||+++.++.
T Consensus 7 ~C~IC~~~~~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 7 GCPICLEDIHTSRVVAHVL-PCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp SCTTTCCCCCTTTSCEEEC-TTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred cCcccChhhcCCCcCeEec-CCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 59999998755 5666 59999999999999999999999998764
No 345
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.90 E-value=0.0033 Score=60.01 Aligned_cols=195 Identities=14% Similarity=0.180 Sum_probs=117.7
Q ss_pred CeEEEEeccCCCEEEEEe------------CCCcEEEEcCCCC-ceEEEc--cc-----CccceeEEEEee--CCC-EEE
Q 010669 225 GIVSLDIHYSKDVIATGG------------VDTNAVLFDRPSG-QIVTTL--SG-----HSKKVTSVKFVT--EGD-LFL 281 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~------------~dg~i~vwd~~~~-~~~~~~--~~-----h~~~v~~l~~s~--~~~-~l~ 281 (504)
+.-.+...++|..+++++ .+|.|.++|..+. .....+ .+ ..-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 445666788776555542 6899999998732 112222 22 223567788766 354 344
Q ss_pred EEe-C--CCcEEEEeCCCCCC-cceeEEeccC-CcCeEEEEEccCCCEEEEEeC-----------------CCeEEEEEC
Q 010669 282 TGS-A--DKTVRVWQGSEDGN-YDCKHTLKDH-TAEVQAVTVHATNKYFVTASL-----------------DNTWCFYDL 339 (504)
Q Consensus 282 s~s-~--dg~i~iwd~~~~~~-~~~~~~~~~h-~~~v~~l~~~p~~~~l~s~s~-----------------dg~i~iwd~ 339 (504)
.+. . +.+|.+|++..++. ...+..+.+. -...+++.+.++|.++++... .|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 442 2 56788888765432 2333344332 235789999999988777641 245666665
Q ss_pred CCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCC-Cce--eeeeeCCCCCeEEEEEcC-CCcEE
Q 010669 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKS-QAN--VAKFDGHVGAVTAISFSE-NGYYL 414 (504)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~~~-~~~--~~~~~~~~~~i~~l~~s~-~g~~l 414 (504)
. +....... -...+.++|+||++.|+++. ..+.|..||+.. ++. ...+. ..+....+++.+ +|.+.
T Consensus 211 ~--~~~~~~~~------l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 211 N--DVRVVAEG------FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp T--CCEEEEEE------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEE
T ss_pred C--eEEEeecC------CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEE
Confidence 3 22211111 13468999999998776664 568999999863 322 22332 346678899999 59988
Q ss_pred EEEeCCc--EEEEEcC
Q 010669 415 ATAAHDG--VKLWDLR 428 (504)
Q Consensus 415 ~s~~~d~--v~vwd~~ 428 (504)
+++..++ |..||..
T Consensus 282 va~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 282 VGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEESCHHHHHSCCTT
T ss_pred EEecCCceEEEEECCC
Confidence 8776564 5555544
No 346
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.89 E-value=0.0013 Score=65.22 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=93.1
Q ss_pred ceeEEEEeeC--CCEEEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC-----eEEEEEC
Q 010669 267 KVTSVKFVTE--GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN-----TWCFYDL 339 (504)
Q Consensus 267 ~v~~l~~s~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg-----~i~iwd~ 339 (504)
....++|+|+ +..|+.+...+.|+.+|..++ .+..+........+++++++|+ |+.+...+ .+..++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g----~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ----YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT----EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC----EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4578999984 344555544488999998663 2333334445689999999999 44444321 2333333
Q ss_pred CCCeE-EEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeeee-e-CCCCCeEEEEEcCCCcEEE
Q 010669 340 SSGIC-LTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTSEALVKIWDVKSQANVAKF-D-GHVGAVTAISFSENGYYLA 415 (504)
Q Consensus 340 ~~~~~-~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~dg~I~iwd~~~~~~~~~~-~-~~~~~i~~l~~s~~g~~l~ 415 (504)
..+.. ...+. .......++++| +|.++++-..++.|+.+|..++.....+ . +....-..++|+|+|.+|+
T Consensus 215 ~~~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 215 ASGFTERLSLC------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp GGTTCCEEEEE------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred CCCeecccccc------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 22211 01111 012356788999 7777777667889999999877652222 2 1122345799999999776
Q ss_pred EEeCC-c-EEEEEcC
Q 010669 416 TAAHD-G-VKLWDLR 428 (504)
Q Consensus 416 s~~~d-~-v~vwd~~ 428 (504)
.+... . |+.+++.
T Consensus 289 vad~~~~~I~~~~~d 303 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEETTTTEEEEEEBC
T ss_pred EEeCCCCEEEEEeCC
Confidence 66655 4 9988865
No 347
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=7.9e-06 Score=60.07 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=42.2
Q ss_pred ccccCCCCCCC--------------ceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCcc
Q 010669 2 NCSISGEVPEE--------------PVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDI 50 (504)
Q Consensus 2 ~c~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 50 (504)
.|+|+.+.+.+ +++.+.+||+|-+.+|.+|++.+.+||+++.++...++
T Consensus 17 ~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~~~ 79 (81)
T 2ecl_A 17 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRI 79 (81)
T ss_dssp CBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEEEE
T ss_pred CCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchhhc
Confidence 48888888766 66776799999999999999999999999999876653
No 348
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=6e-06 Score=56.39 Aligned_cols=40 Identities=35% Similarity=0.454 Sum_probs=34.5
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHH---hcCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHIL---DYGKCPVT 41 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~ 41 (504)
+.|+|+.+.+.+||+.+ +||+|.+.+|.+|+. .+.+||+.
T Consensus 16 ~~C~IC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 16 ASCSVCLEYLKEPVIIE-CGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CBCSSSCCBCSSCCCCS-SCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred CCCccCCcccCccEeCC-CCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 36999999999999996 999999999999965 44578874
No 349
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.85 E-value=3e-06 Score=67.25 Aligned_cols=45 Identities=20% Similarity=0.281 Sum_probs=40.9
Q ss_pred ccccCCCCCCCceEeCCCCeeeeHHHHHHHHHh-cCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLLFEKRLIERHILD-YGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.+||+.+ +||+|++.+|.+|+.. +.+||+++.+++.
T Consensus 17 ~C~iC~~~~~~p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 17 QCGICMEILVEPVTLP-CNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp BCTTTCSBCSSCEECT-TSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCccCCcccCceeEcC-CCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 6999999999999996 9999999999999987 4579999998864
No 350
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.83 E-value=1.6e-05 Score=57.50 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=40.5
Q ss_pred ccccCCCCCCCc---eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEP---VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMD 48 (504)
Q Consensus 2 ~c~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 48 (504)
.|+|+.+.+.++ ++.| +||+|.+.+|.+|++.+.+||+++.+++..
T Consensus 25 ~C~IC~~~~~~~~~~~~l~-C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 25 LCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICRADSGPS 73 (75)
T ss_dssp EETTTTEECCBTCEEEEET-TTEEEETTHHHHHHHHCSSCTTTCCCCCCC
T ss_pred CCeECCcccCCCCeEEEEC-CCCHhHHHHHHHHHHcCCcCcCcCCcCCCC
Confidence 599999888776 6675 999999999999999999999999988753
No 351
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.83 E-value=0.00011 Score=77.65 Aligned_cols=204 Identities=9% Similarity=-0.002 Sum_probs=117.5
Q ss_pred CeEEEEeccCCCEEEEE-eCCCcEEEEcCCC----CceEEEcccCccceeEEEEeeC-CCEEEEEeCCCcEEEEeCCCCC
Q 010669 225 GIVSLDIHYSKDVIATG-GVDTNAVLFDRPS----GQIVTTLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG 298 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg-~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~~~~ 298 (504)
.+..++|++.+..|+.+ ...+.|+.+++.. ......+.........|++.+. ++++++-...+.|.++++...
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~- 485 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV- 485 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC-
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC-
Confidence 45678899876665554 4567888888764 2222222222233567888754 445555556788999998753
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-CEEEEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-LILGTG 375 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-~~l~~g 375 (504)
.....+.........|+++|.+.+|+.+.. .+.|..+++........+. ..-.....++|+|++ .++++-
T Consensus 486 --~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~-----~~l~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 486 --KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp --CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC-----SSCSSCCCEEECTTTCCEEEEE
T ss_pred --ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe-----CCCCCccEEEEeccCCEEEEEe
Confidence 222222222244678899987666555543 2678888776433222211 112346789999965 455555
Q ss_pred eCCCcEEEEEcCCCceeeeee--CCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcceeeeec
Q 010669 376 TSEALVKIWDVKSQANVAKFD--GHVGAVTAISFSENGYYLATAAH-DG-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 376 ~~dg~I~iwd~~~~~~~~~~~--~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~~~~~~~ 438 (504)
...+.|..+|+........+. ........|++..+ .|+.... .+ |..+|..+++.+..+..
T Consensus 559 ~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 559 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred cCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 567889999986433222222 11233455666543 4444433 34 99999888877666643
No 352
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.81 E-value=0.02 Score=59.40 Aligned_cols=215 Identities=9% Similarity=0.033 Sum_probs=119.7
Q ss_pred CCcEEEEcCCCCc-eEEEcccCccceeEEEEeeCCCEEEEE-eCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccC
Q 010669 244 DTNAVLFDRPSGQ-IVTTLSGHSKKVTSVKFVTEGDLFLTG-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT 321 (504)
Q Consensus 244 dg~i~vwd~~~~~-~~~~~~~h~~~v~~l~~s~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 321 (504)
...|+..++.... ....+...-..+..++|++.+..|+.+ ...+.|..+++.... .....+...-.....+++.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEEEEEETT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--ceEEEEeCCCCCcCeEEEEec
Confidence 4568888886543 222223334557899999866655544 456788888886531 112223322356889999986
Q ss_pred CCEEEE-EeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCceeeeeeCC
Q 010669 322 NKYFVT-ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT--SEALVKIWDVKSQANVAKFDGH 398 (504)
Q Consensus 322 ~~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~--~dg~I~iwd~~~~~~~~~~~~~ 398 (504)
+..|+. -...+.|.+.++.......... ..-.....++++|.+..|+... ..+.|...++............
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-----~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~ 169 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 169 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC-----SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEe-----CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC
Confidence 555544 4567899999998654333221 1123467899999644444433 2467777777533322222223
Q ss_pred CCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEe
Q 010669 399 VGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQV 469 (504)
Q Consensus 399 ~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~ 469 (504)
-...+.|++++++..|+.+... + |..+|+............ ......+++..+ .|+.+... |...+.
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~P~gi~~~~~--~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLFED--ILYWTDWSTHSILACNK 241 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEEES
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC--CCCceEEEEeCC--EEEEecCCCCEEEEEEC
Confidence 4568999999977777776655 3 999998653322222111 223456777655 66665544 555553
No 353
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.80 E-value=1.6e-05 Score=59.96 Aligned_cols=45 Identities=18% Similarity=0.219 Sum_probs=39.7
Q ss_pred ccccCCCCCCC---ceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEE---PVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.+ +++.| +||+|.+.+|.+|+..+++||+++.++..
T Consensus 42 ~C~IC~~~~~~~~~~~~l~-C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 42 CCPICCSEYVKGDVATELP-CHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp EETTTTEECCTTCEEEEET-TTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCcccChhhcCCCcEEecC-CCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 59999888766 77786 99999999999999999999999988753
No 354
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.80 E-value=0.0079 Score=56.12 Aligned_cols=230 Identities=14% Similarity=0.271 Sum_probs=116.9
Q ss_pred CCEEEEEeCC----CcEEEEcCCCCceEEE--cccCccceeEEEEeeCCCEEEEEeCC-----CcEEEEeCCCCCCccee
Q 010669 235 KDVIATGGVD----TNAVLFDRPSGQIVTT--LSGHSKKVTSVKFVTEGDLFLTGSAD-----KTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 235 ~~~l~sg~~d----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~ 303 (504)
+.+++.|+.+ ..+..||..+.+-... +...... .+++ .-++.+++.|+.+ ..+.+||..+. .+..+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEESCBCSSSBCCCEEEEETTTT-EEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEE-EECCEEEEEeCcCCCccccceEEECCCCC-ceeeC
Confidence 4455666643 3578888877653222 1111111 1222 2267777777754 35888888763 33333
Q ss_pred EEeccCCcCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 304 HTLKDHTAEVQAVTVHATNKYFVTASLDN-----TWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 304 ~~~~~h~~~v~~l~~~p~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
..+.........+.+ ++..++.|+.++ .+.+||+.+.+-...-. .........++.+ ++.+++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~ 165 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP---MNTRRSSVGVGVV--GGLLYAVGGYD 165 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC---CCCcccCceEEEE--CCEEEEEeCCC
Confidence 332221112222222 577777777653 57889988876443321 1111112222222 56777777643
Q ss_pred -------CcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC------cEEEEEcCCCcceeeeecCCCCC
Q 010669 379 -------ALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD------GVKLWDLRKLKNFRSFESSDSET 443 (504)
Q Consensus 379 -------g~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d------~v~vwd~~~~~~~~~~~~~~~~~ 443 (504)
..+.+||+.+.+ .+..+.........+.+ ++.+++.|+.+ .+.+||+.+.+-...-.......
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR 243 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc
Confidence 358899987653 22222211122223333 67777777643 28999998754322111111111
Q ss_pred CeeEEEECCCCCEEEEEeCc-------EEEEEeeccCccceeEE
Q 010669 444 PTNSVDFDHSGSYLAVASAD-------IRVYQVASVKADWNCIK 480 (504)
Q Consensus 444 ~v~~i~~~~~g~~l~~~~~d-------i~vw~~~~~~~~~~~i~ 480 (504)
....+.+ ++.+++.|+.+ +.+||. ....|..+.
T Consensus 244 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~ 283 (302)
T 2xn4_A 244 NAGVCAV--NGLLYVVGGDDGSCNLASVEYYNP--TTDKWTVVS 283 (302)
T ss_dssp SCEEEEE--TTEEEEECCBCSSSBCCCEEEEET--TTTEEEECS
T ss_pred cCeEEEE--CCEEEEECCcCCCcccccEEEEcC--CCCeEEECC
Confidence 1122222 56677777643 566665 346788765
No 355
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=4.2e-06 Score=59.75 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=44.6
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
..|+|+.+.+.+ ++.| +||+|.+.+|.+|+..+.+||+++.++...+.+.+
T Consensus 16 ~~C~IC~~~~~~-~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 66 (70)
T 2ecn_A 16 EECCICMDGRAD-LILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANESSG 66 (70)
T ss_dssp CCCSSSCCSCCS-EEET-TTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCCCC
T ss_pred CCCeeCCcCccC-cccC-CCCcccHHHHHHHHHCcCcCCCcCCcccCCCcccc
Confidence 369999999999 8886 99999999999999988899999999887665443
No 356
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.79 E-value=0.027 Score=58.39 Aligned_cols=198 Identities=7% Similarity=-0.048 Sum_probs=124.7
Q ss_pred CCeEEEEeccCCCEEE-EEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCcc
Q 010669 224 PGIVSLDIHYSKDVIA-TGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYD 301 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~~ 301 (504)
..+..++|++.+..|+ +-..++.|..+++........+.........+++.+.+. +.++-...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~--- 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH--- 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT---
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc---
Confidence 3578999998766554 445678899988875544444433334577899887554 44555567889999886532
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE-eCC
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG-TSE 378 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g-~~d 378 (504)
....+...-....+|+++|...+|+.+.. .+.|...++.......... .-.....+++++++..|..+ ...
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~------~~~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP------NVGRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC------SCSSEEEEEEETTTTEEEEEETTT
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC------CCCCcceEEEccccCEEEEEECCC
Confidence 11112233345789999997666666653 5688888887654333332 12457899999976555544 556
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcce
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAH-DG-VKLWDLRKLKNF 433 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~~ 433 (504)
+.|..+|+..... ..+.........+++.. + .|+.+.. .+ |...|..+++..
T Consensus 188 ~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 188 NLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp TEEEEEETTSCSC-EEEEECCSCEEEEEEET-T-EEEEEETTTTEEEEEETTTCCSC
T ss_pred CEEEEEcCCCCce-EEeeccCCCceEEEEEC-C-EEEEecCCCCEEEEEECCCCCce
Confidence 7899999865433 33333334566888864 3 4444444 44 888887666543
No 357
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.75 E-value=1.5e-05 Score=64.96 Aligned_cols=52 Identities=19% Similarity=0.393 Sum_probs=47.1
Q ss_pred CccccCCCCCCCc-------eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEP-------VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+.+...+| ++. .+||+|.+.+|++|++.+.+||+++.++..++++++
T Consensus 73 ~~C~iC~~~~~~~~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 131 (133)
T 4ap4_A 73 VSCPICMDGYSEIVQNGRLIVST-ECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI 131 (133)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEE-TTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGGEEEE
T ss_pred CCCCCCCCccccccccCcceEeC-CCCChhhHHHHHHHHHcCCCCCCCCCcCChhcceee
Confidence 3599999998887 666 599999999999999999999999999999999886
No 358
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.69 E-value=0.011 Score=61.21 Aligned_cols=200 Identities=8% Similarity=0.010 Sum_probs=117.4
Q ss_pred CCeEEEEeccCCCEEEEEe-CCCcEEEEcCCCCce-EEEcccCccceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCc
Q 010669 224 PGIVSLDIHYSKDVIATGG-VDTNAVLFDRPSGQI-VTTLSGHSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNY 300 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~-~dg~i~vwd~~~~~~-~~~~~~h~~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~ 300 (504)
.....++|++.++.|+.+. ..+.|..+++..... ...+.........+++.+.+. ++++-...+.|.+.+.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-- 117 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-- 117 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC--
Confidence 3477999998776665544 467888888765432 233333335688999998555 45555567899999987631
Q ss_pred ceeEEeccCCcCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE-EEEeC
Q 010669 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASL--DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL-GTGTS 377 (504)
Q Consensus 301 ~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l-~~g~~ 377 (504)
....+...-....+|+++|.+.+|+.+.. .+.|...++.......... ..-.....+++++++..| ++-..
T Consensus 118 -~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~-----~~~~~P~Glald~~~~~LY~aD~~ 191 (619)
T 3s94_A 118 -RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-----SEIYWPNGLTLDYEEQKLYWADAK 191 (619)
T ss_dssp -CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-----SSCSSEEEEEEETTTTEEEEEETT
T ss_pred -EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe-----CCCCCCcEEEEEccCCEEEEEeCC
Confidence 11122233345678999997666666653 4677777776543332222 112457899999965544 44456
Q ss_pred CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c-EEEEEcCCCcce
Q 010669 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G-VKLWDLRKLKNF 433 (504)
Q Consensus 378 dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~-v~vwd~~~~~~~ 433 (504)
.+.|..+|+..........+.......|++..+ .|+.+... + |...|..+++..
T Consensus 192 ~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 192 LNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp TCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCccc
Confidence 678999998643322222212223356777655 55555443 4 888888776543
No 359
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.68 E-value=0.017 Score=55.34 Aligned_cols=237 Identities=11% Similarity=0.013 Sum_probs=126.2
Q ss_pred CeEEEEeccCCC-EEEEEeCCCcEEEEcCCCCceEEEc-------ccCccceeEEEEeeC---CCEEEEE-eC-------
Q 010669 225 GIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTL-------SGHSKKVTSVKFVTE---GDLFLTG-SA------- 285 (504)
Q Consensus 225 ~I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~l~~s~~---~~~l~s~-s~------- 285 (504)
.-..|+|.|+|+ +++ +...|.|++++.. +.....+ .........++|+|+ +..|+.+ +.
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457999999999 554 5567999999853 3321111 112345789999995 4444433 22
Q ss_pred CCcEEEEeCCCCC-CcceeE----Eecc---CCcCeEEEEEccCCCEEEEEeC-------------CCeEEEEECCCCe-
Q 010669 286 DKTVRVWQGSEDG-NYDCKH----TLKD---HTAEVQAVTVHATNKYFVTASL-------------DNTWCFYDLSSGI- 343 (504)
Q Consensus 286 dg~i~iwd~~~~~-~~~~~~----~~~~---h~~~v~~l~~~p~~~~l~s~s~-------------dg~i~iwd~~~~~- 343 (504)
...|..|+..... ...... .+.. ....-..|.|.|+|.++++.+. .|.|.-+|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 2346666654321 111111 1110 1112357999999976666543 2456666665320
Q ss_pred -----------EEEEeecCCCCCCCCCeEEEEECC-CCCEEEEEeC-CCcEEEEEcCCC---------------------
Q 010669 344 -----------CLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTS-EALVKIWDVKSQ--------------------- 389 (504)
Q Consensus 344 -----------~~~~~~~~~~~~~~~~v~~~~~~p-dg~~l~~g~~-dg~I~iwd~~~~--------------------- 389 (504)
....+.. ++ .....++|+| +|.++++-.. ++.=.|.-+..+
T Consensus 177 ~~npf~~~~~~~~~i~a~----G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSY----GI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp TTCTTTTSTTSCTTEEEE----CC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCcCCCCCCccEEEE----cC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 0000100 11 2367899999 6666554322 111122211111
Q ss_pred ----------ceeeeeeCCCCCeEEEEEcC-------CCcEEEEEeCCc-EEEEEcCCCcceeeeecC-CCCCCeeEEEE
Q 010669 390 ----------ANVAKFDGHVGAVTAISFSE-------NGYYLATAAHDG-VKLWDLRKLKNFRSFESS-DSETPTNSVDF 450 (504)
Q Consensus 390 ----------~~~~~~~~~~~~i~~l~~s~-------~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~~-~~~~~v~~i~~ 450 (504)
.++..+. +...+..+.|.. +|.++++.-..+ |...++..++........ .....+..+++
T Consensus 252 ~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp CCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred ccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 1112222 234677888864 466666655555 888887755433222111 11357899999
Q ss_pred CCCCCEEEEEeC-cEEEEEe
Q 010669 451 DHSGSYLAVASA-DIRVYQV 469 (504)
Q Consensus 451 ~~~g~~l~~~~~-di~vw~~ 469 (504)
.|+|.+.++... +.+||.+
T Consensus 331 ~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 331 GPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp CTTSCEEEEECSTTEEEEEE
T ss_pred CCCCcEEEEEeCCCCEEEEE
Confidence 999986665443 3888887
No 360
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.68 E-value=6.4e-05 Score=54.11 Aligned_cols=44 Identities=14% Similarity=0.200 Sum_probs=38.4
Q ss_pred ccccCCCCCCCceEe---CCCCeeeeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVS---KNSGLLFEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
.|+|+.+.+.+|... | +||+|.+.+|.+|++.+.+||+++.++.
T Consensus 17 ~C~IC~~~~~~~~~~~~~~-C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 17 LCAVCLEDFKPRDELGICP-CKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp BCSSSCCBCCSSSCEEEET-TTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred CCcCCCcccCCCCcEEEcC-CCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 599999998766433 5 9999999999999999999999998875
No 361
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.65 E-value=7.4e-05 Score=52.93 Aligned_cols=45 Identities=18% Similarity=0.366 Sum_probs=38.3
Q ss_pred ccccCCCCCC---CceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPE---EPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+. .+++.| +||+|.+.+|.+|+..+++||+++.+++.
T Consensus 16 ~C~IC~~~~~~~~~~~~~~-C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 16 KCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp SBTTTTBCCCSSSCEEECT-TSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCeeCCccccCCCcEEEeC-CCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 5999987763 456665 99999999999999999999999988764
No 362
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.60 E-value=0.052 Score=51.91 Aligned_cols=226 Identities=12% Similarity=0.154 Sum_probs=115.8
Q ss_pred cceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEec---cCCcCeEEEEEccC---CCEEEEEeC-C-----Ce
Q 010669 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK---DHTAEVQAVTVHAT---NKYFVTASL-D-----NT 333 (504)
Q Consensus 266 ~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~l~~~p~---~~~l~s~s~-d-----g~ 333 (504)
.....++|.|+|++++ +..+|.|.+++ .+ ....+..+. ........|+|+|+ +..|+.+.. . +.
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g-~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EG-RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TT-EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CC-CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3468999999998555 45669999998 22 222222221 22356899999998 555544433 2 67
Q ss_pred EEEEECCCCeE---EEEeecCCC-CCCCCCeEEEEECCCCCEEEEEeC-------------CCcEEEEEcCCC-------
Q 010669 334 WCFYDLSSGIC---LTQVSDAGT-DGRPEGYTSAAFHPDGLILGTGTS-------------EALVKIWDVKSQ------- 389 (504)
Q Consensus 334 i~iwd~~~~~~---~~~~~~~~~-~~~~~~v~~~~~~pdg~~l~~g~~-------------dg~I~iwd~~~~------- 389 (504)
|..|+...+.. ...+..... .........++|.|||.++++-+. .|.|.-+|....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 88888875421 111110100 111123468999999987766432 255666665420
Q ss_pred -----ceeeee-eCCCCCeEEEEEcC-CCcEEEEEeCCc-E------EEEEcCCCcc------------------eeeee
Q 010669 390 -----ANVAKF-DGHVGAVTAISFSE-NGYYLATAAHDG-V------KLWDLRKLKN------------------FRSFE 437 (504)
Q Consensus 390 -----~~~~~~-~~~~~~i~~l~~s~-~g~~l~s~~~d~-v------~vwd~~~~~~------------------~~~~~ 437 (504)
.....+ .++. ....++|+| +|.++++-.... + .+.-+..+.. +..+
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~- 264 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW- 264 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-
Confidence 011111 2232 367789999 666555433222 2 2333333221 1111
Q ss_pred cCCCCCCeeEEEECCCCCEEEEEeCc--EEEEEeeccCccc--eeEEEccCCCCCCceeEEEEeecCcc
Q 010669 438 SSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADW--NCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 438 ~~~~~~~v~~i~~~~~g~~l~~~~~d--i~vw~~~~~~~~~--~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
. .......++| .+|.++++.-.. |...+++.....+ .....+-. ..+.+..+.+.|+|.+
T Consensus 265 -~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~l 328 (352)
T 2ism_A 265 -P-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGAL 328 (352)
T ss_dssp -T-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCE
T ss_pred -C-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcE
Confidence 1 1234567777 456555443333 5555553322211 11122211 1457899999999864
No 363
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.063 Score=51.34 Aligned_cols=224 Identities=13% Similarity=0.098 Sum_probs=117.5
Q ss_pred cceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEec---cCCcCeEEEEEccC---CCEEEEEeC----C----
Q 010669 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK---DHTAEVQAVTVHAT---NKYFVTASL----D---- 331 (504)
Q Consensus 266 ~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~l~~~p~---~~~l~s~s~----d---- 331 (504)
.....++|.|+|++++ +..+|.|.+++. . +. ..+..+. ........|+++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISP-S-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECS-S-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeC-C-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 4578999999998544 566699999973 2 22 2222221 12346889999997 444544432 3
Q ss_pred CeEEEEECCCC--eE--EEE-eecCCCCCCCCCeEEEEECCCCCEEEEEeC-------------CCcEEEEEcCCC----
Q 010669 332 NTWCFYDLSSG--IC--LTQ-VSDAGTDGRPEGYTSAAFHPDGLILGTGTS-------------EALVKIWDVKSQ---- 389 (504)
Q Consensus 332 g~i~iwd~~~~--~~--~~~-~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~-------------dg~I~iwd~~~~---- 389 (504)
..|..|+.... .. ... +... ..........++|.|||.++++-+. .|.|.-+|....
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~-~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGI-PGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEE-ECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcC-CCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 57888887654 11 111 1100 0011123467999999987776432 245665655321
Q ss_pred ----ceeeeeeCCCCCeEEEEEcC-CCcEEEEEeCC-c---EEEEEcCCCc------------------ceeeeecCCCC
Q 010669 390 ----ANVAKFDGHVGAVTAISFSE-NGYYLATAAHD-G---VKLWDLRKLK------------------NFRSFESSDSE 442 (504)
Q Consensus 390 ----~~~~~~~~~~~~i~~l~~s~-~g~~l~s~~~d-~---v~vwd~~~~~------------------~~~~~~~~~~~ 442 (504)
.....-.++. ....++|+| +|.++++-... . |.+.. .+. .+..+. ...
T Consensus 184 npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~--~~~ 258 (354)
T 3a9g_A 184 NPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG--SET 258 (354)
T ss_dssp SSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT--TCC
T ss_pred CCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC--CCC
Confidence 0011112343 356899999 67655554322 1 44332 222 111110 113
Q ss_pred CCeeEEEEC-------CCCCEEEEEeCc--EEEEEeeccCccceeEEEc-cCCCCCCceeEEEEeecCcc
Q 010669 443 TPTNSVDFD-------HSGSYLAVASAD--IRVYQVASVKADWNCIKTF-PDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 443 ~~v~~i~~~-------~~g~~l~~~~~d--i~vw~~~~~~~~~~~i~~~-~~h~~~~~v~~l~~~~~g~~ 502 (504)
.....++|. .+|.++++.-.. |...++.... .......+ .+- ...+..+.+-|+|.+
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g-~~~~~~~~~~~~--~~rp~~v~~~pDG~l 325 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNM-EVRKISTFFKNV--FGRLRDVVIDDDGGI 325 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGG-CEEEEEEECTTT--SCCEEEEEECTTSCE
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCC-cccceeeeccCC--CCCeeEEEECCCCcE
Confidence 457788884 466665554433 5555553211 11112232 221 457889999998854
No 364
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.52 E-value=0.058 Score=50.07 Aligned_cols=226 Identities=14% Similarity=0.173 Sum_probs=136.0
Q ss_pred EEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEec
Q 010669 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 307 (504)
+.-.+|..+.+|.-. ..++.+||+++.+.+..+.- ...|.-=.|-.+..+ +..+ +..|.-|++.... .+.+.+.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L-~lVT-~taVyHWs~~~~s--~P~kvFd 144 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTV-ALVT-DNAVYHWSMEGES--QPVKMFD 144 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEE-EEEE-SSEEEEEESSTTC--CCEEEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeE-EEEc-CCcEEEEcccCCC--CCceeee
Confidence 344578888777765 67899999999988888774 356766677654443 3332 3479999997643 4555554
Q ss_pred cC----CcCeEEEEEccCCCEEEEEeC-------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-----CE
Q 010669 308 DH----TAEVQAVTVHATNKYFVTASL-------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-----LI 371 (504)
Q Consensus 308 ~h----~~~v~~l~~~p~~~~l~s~s~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg-----~~ 371 (504)
-| ...|..-..+++.++++..+- .|.+.+|..+.+... .+. +|..... .+-.+| .+
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~ie-----Ghaa~F~--~~~~~g~~~~~~l 216 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIE-----GHAASFA--QFKMEGNAEESTL 216 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-EEC-----CSEEEEE--EECCTTCSSCEEE
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc-eee-----eeeeeeE--EEecCCCCCCceE
Confidence 43 346777777888887765542 367889998876432 222 3322222 222222 23
Q ss_pred EEEEeC---CCcEEEEEcCCC---ce------eeeeeC---CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceee
Q 010669 372 LGTGTS---EALVKIWDVKSQ---AN------VAKFDG---HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435 (504)
Q Consensus 372 l~~g~~---dg~I~iwd~~~~---~~------~~~~~~---~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~ 435 (504)
|+.+.. .+.++|.++... .+ +..+-. ...-..++..++.-..++.-+..| |.+||+.++.++..
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 333332 258999998432 11 111111 234566788888777788888888 99999999998877
Q ss_pred eecCCCCCCeeEEEECCCCCEEEEEeCcEEEEEe
Q 010669 436 FESSDSETPTNSVDFDHSGSYLAVASADIRVYQV 469 (504)
Q Consensus 436 ~~~~~~~~~v~~i~~~~~g~~l~~~~~di~vw~~ 469 (504)
-... ...|..-+-+.+..=+++......|..+
T Consensus 297 nrIS--~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v 328 (365)
T 2xzh_A 297 NRIS--GETIFVTAPHEATAGIIGVNRKGQVLSV 328 (365)
T ss_dssp EECC--SSCEEEEEEEGGGTEEEEEETTCEEEEE
T ss_pred eccC--CCceEEecccCCCCcEEEEcCCCEEEEE
Confidence 6654 3455444444333333333344444443
No 365
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.46 E-value=2e-05 Score=53.24 Aligned_cols=44 Identities=14% Similarity=0.256 Sum_probs=38.7
Q ss_pred CccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMD 48 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 48 (504)
+.|+|+.+.+.+|++.| +||+|.+.+|.+ ...+||+.+.++++.
T Consensus 7 ~~C~IC~~~~~~p~~l~-CgH~fC~~Ci~~---~~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 7 LRCQQCQAEAKCPKLLP-CLHTLCSGCLEA---SGMQCPICQAPWPLG 50 (56)
T ss_dssp SSCSSSCSSCBCCSCST-TSCCSBTTTCSS---SSSSCSSCCSSSSCC
T ss_pred CCceEeCCccCCeEEcC-CCCcccHHHHcc---CCCCCCcCCcEeecC
Confidence 46999999999999997 999999999988 356799999988764
No 366
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.46 E-value=0.17 Score=53.84 Aligned_cols=223 Identities=10% Similarity=0.057 Sum_probs=129.6
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCccee
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 303 (504)
..|.++....+| .|..|+.+| +..||..+.+...........|.++.. .++. |..++.+ -+..||..+. . .
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~---~-~ 133 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSR---K-L 133 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTC---C-E
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCC---e-E
Confidence 468888777665 555666665 788998765432211112234776654 3554 5555655 5778887653 1 2
Q ss_pred EEec-----cCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 304 HTLK-----DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 304 ~~~~-----~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
..+. .....|.++....++.+.+ |+. +.+..+|..++.................|.++...+++..|.+|+.
T Consensus 134 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 134 TSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 2221 1234688888877777555 444 4577889877754322111100011234888888887775555664
Q ss_pred CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecC------CCCCCeeEEEECC
Q 010669 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESS------DSETPTNSVDFDH 452 (504)
Q Consensus 379 g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~------~~~~~v~~i~~~~ 452 (504)
+-|..||..+++...........|.++....+|.+.+. +.+|+.+++..+.... .+... -....|.++..+.
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~ 288 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQ 288 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECT
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcC
Confidence 45888998765432211112345888888888876654 4567999998765432 22110 1134688998888
Q ss_pred CCCEEEEE
Q 010669 453 SGSYLAVA 460 (504)
Q Consensus 453 ~g~~l~~~ 460 (504)
+|.+-+..
T Consensus 289 ~g~lWiGT 296 (758)
T 3ott_A 289 EHNIWLGT 296 (758)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEe
Confidence 88765543
No 367
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.44 E-value=0.063 Score=50.23 Aligned_cols=233 Identities=12% Similarity=0.120 Sum_probs=115.8
Q ss_pred EEEEEeCCCcEEEEcCCCCceEE-EcccCccceeEEEEeeCCCEEEEEeC-----C------CcEEEEeCCCCCCcceeE
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVT-TLSGHSKKVTSVKFVTEGDLFLTGSA-----D------KTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~s~-----d------g~i~iwd~~~~~~~~~~~ 304 (504)
+++.|+ ..+.+||..+++-.. .+..............++.+++.|+. . ..+.+||..+. .+..+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC-eEEECC
Confidence 344555 568999998776432 22211122222233347777777773 1 12677887763 333222
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCC--------CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLD--------NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~ 376 (504)
.+.........+.+ ++..++.|+.+ ..+.+||..+++-...-. ....... .+++. .++++++.|+
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~-~~~~~-~~~~iyv~GG 156 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---LPYVVYG-HTVLS-HMDLVYVIGG 156 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---CSSCCBS-CEEEE-ETTEEEEECC
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---CCCcccc-eeEEE-ECCEEEEEeC
Confidence 22211111112222 56677777642 358899998875332211 1111111 22222 3567788877
Q ss_pred C-C-----CcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC------cEEEEEcCCCcceeeeecCCCC
Q 010669 377 S-E-----ALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD------GVKLWDLRKLKNFRSFESSDSE 442 (504)
Q Consensus 377 ~-d-----g~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d------~v~vwd~~~~~~~~~~~~~~~~ 442 (504)
. + ..+.+||+.+.+ .+..+......-..+.+ ++.+++.|+.+ .+.+||+.+.+-...-......
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 234 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER 234 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 6 2 468999987653 22222211112223333 66777777643 2788998875432221111111
Q ss_pred CCeeEEEECCCCCEEEEEeCc--------------EEEEEeeccCccceeEEEcc
Q 010669 443 TPTNSVDFDHSGSYLAVASAD--------------IRVYQVASVKADWNCIKTFP 483 (504)
Q Consensus 443 ~~v~~i~~~~~g~~l~~~~~d--------------i~vw~~~~~~~~~~~i~~~~ 483 (504)
.....+.+ ++.+++.|+.+ -.+|.++.....|+.+....
T Consensus 235 ~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 235 SSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp BSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCS
T ss_pred cceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCC
Confidence 12222333 55666666642 23455555557899884443
No 368
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.42 E-value=0.026 Score=52.42 Aligned_cols=186 Identities=14% Similarity=0.202 Sum_probs=101.0
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCc---eEEE--cccCccceeEEEEeeCCCEEEEEeCC-----CcEEEEeCCCCC
Q 010669 234 SKDVIATGGVD-----TNAVLFDRPSGQ---IVTT--LSGHSKKVTSVKFVTEGDLFLTGSAD-----KTVRVWQGSEDG 298 (504)
Q Consensus 234 ~~~~l~sg~~d-----g~i~vwd~~~~~---~~~~--~~~h~~~v~~l~~s~~~~~l~s~s~d-----g~i~iwd~~~~~ 298 (504)
++.+++.|+.+ ..+.+||..+.+ -... +......-..+. -++.+++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 56777777755 468899987765 3222 221111112222 267777777654 35788888763
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEE
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~ 373 (504)
.+..+..+......-..+.+ ++..++.|+.+ ..+.+||+.+..-...-. .........++.+ ++.+++
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v 211 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP---MATKRSGAGVALL--NDHIYV 211 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEEE
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC---CCcccccceEEEE--CCEEEE
Confidence 34444333222122222222 67777777754 458899998876543321 1111112223333 577888
Q ss_pred EEeCC-----CcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----c-EEEEEcCCCc
Q 010669 374 TGTSE-----ALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAHD-----G-VKLWDLRKLK 431 (504)
Q Consensus 374 ~g~~d-----g~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~ 431 (504)
.|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ . |.+||+.+.+
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 88764 4689999977542 2222211122223333 67777777654 3 7888887644
No 369
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.41 E-value=0.1 Score=50.38 Aligned_cols=228 Identities=13% Similarity=0.157 Sum_probs=138.9
Q ss_pred EEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEec
Q 010669 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307 (504)
Q Consensus 228 ~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 307 (504)
+.-.+|..+.+|.-. ..++.|||+++...+..+.-. ..|.-=.|-.+..+ +..+ +..|.-|++.... .+...+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~l-~lVT-~taVyHWsi~~~s--~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTV-ALVT-DNAVYHWSMEGES--QPVKMFD 143 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTEE-EEEC-SSEEEEEESSSSC--CCEEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCeE-EEEc-CCeeEEecccCCC--Cchhhee
Confidence 344677777776655 678999999999888887743 45666677655543 3322 4579999997633 4555554
Q ss_pred cC----CcCeEEEEEccCCCEEEEEeC-------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC---CCEEE
Q 010669 308 DH----TAEVQAVTVHATNKYFVTASL-------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD---GLILG 373 (504)
Q Consensus 308 ~h----~~~v~~l~~~p~~~~l~s~s~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd---g~~l~ 373 (504)
-| ...|..-..+++.++++..+- .|.+.+|..+.+... .+. +|......+.+..+ ..+|+
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~ie-----Ghaa~F~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIE-----GHAASFAQFKMEGNAEESTLFC 217 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE-EEC-----CSEEEEEEEECTTCSSEEEEEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc-hhe-----eeeeeeEEEecCCCCCCceEEE
Confidence 44 346777778888887765442 467889998876432 222 33333322222211 12344
Q ss_pred EEeC---CCcEEEEEcCCC---ce------eeee-e--CCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeee
Q 010669 374 TGTS---EALVKIWDVKSQ---AN------VAKF-D--GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437 (504)
Q Consensus 374 ~g~~---dg~I~iwd~~~~---~~------~~~~-~--~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~ 437 (504)
.+.. .+.++|.++... .+ +..+ . .-..-..++..++.-..++.-+..| |.+||+.++.++..-.
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 4433 278999998543 11 1111 1 1234566788888777788888888 9999999999887766
Q ss_pred cCCCCCCeeEEEECCCCCEEEEEeCcEEEEEe
Q 010669 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQV 469 (504)
Q Consensus 438 ~~~~~~~v~~i~~~~~g~~l~~~~~di~vw~~ 469 (504)
.. ...|..-+-+....=+++....+.|..+
T Consensus 298 Is--~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v 327 (494)
T 1bpo_A 298 IS--GETIFVTAPHEATAGIIGVNRKGQVLSV 327 (494)
T ss_dssp CC--SSCEEEEEEETTTTEEEEEETTCEEEEE
T ss_pred cc--CCceEEecccCCCCcEEEEccCceEEEE
Confidence 54 3455544444443334444444455444
No 370
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.39 E-value=0.013 Score=58.35 Aligned_cols=155 Identities=11% Similarity=0.040 Sum_probs=94.0
Q ss_pred CeEEEEEccC-CCEEEEEe-CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEE-------CCCCCEEEEEeCCC---
Q 010669 312 EVQAVTVHAT-NKYFVTAS-LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF-------HPDGLILGTGTSEA--- 379 (504)
Q Consensus 312 ~v~~l~~~p~-~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~pdg~~l~~g~~dg--- 379 (504)
....|+|+|. +..|+.+. ..+.|++.|+.++......... . ........++| +++|..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~-~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN-T-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT-T-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC-c-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 4678999983 44444444 4467999999988766554321 1 12345889999 99999666665543
Q ss_pred ----cEEEEEcCC-Ccee-----eeeeCCCCCeEEEEEcCC-CcEEEEEeCCc-EEEEEcC-------CCcc--------
Q 010669 380 ----LVKIWDVKS-QANV-----AKFDGHVGAVTAISFSEN-GYYLATAAHDG-VKLWDLR-------KLKN-------- 432 (504)
Q Consensus 380 ----~I~iwd~~~-~~~~-----~~~~~~~~~i~~l~~s~~-g~~l~s~~~d~-v~vwd~~-------~~~~-------- 432 (504)
.|.+++... +... ..+... .....++++|+ +.++++-..++ |..+|+. ++..
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 266676433 1221 122211 23467889995 44444444556 9999987 4443
Q ss_pred ---eee-eecCCCCCCeeEEEECCCCCEEEEEeCc---EEEEEee
Q 010669 433 ---FRS-FESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQVA 470 (504)
Q Consensus 433 ---~~~-~~~~~~~~~v~~i~~~~~g~~l~~~~~d---i~vw~~~ 470 (504)
... +... .......++|+|+|++|+.+... |+.++++
T Consensus 297 ~g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 112 2222 13456899999999987777654 6665553
No 371
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.38 E-value=0.00013 Score=56.22 Aligned_cols=46 Identities=20% Similarity=0.277 Sum_probs=39.5
Q ss_pred ccccCCCCCCCc-----------------eEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEP-----------------VVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.++ ++...+||+|-+.+|.+||..+.+||+++.+..+
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 101 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCE
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCccee
Confidence 499998887765 5555799999999999999999999999988654
No 372
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.35 E-value=0.00013 Score=52.83 Aligned_cols=52 Identities=21% Similarity=0.293 Sum_probs=41.4
Q ss_pred CccccCCCCC--CCceEeC-CCCeeeeHHHHHHHHHh-cCCCCCCCCCCCCCcccc
Q 010669 1 MNCSISGEVP--EEPVVSK-NSGLLFEKRLIERHILD-YGKCPVTGEPLTMDDIVP 52 (504)
Q Consensus 1 ~~c~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~ 52 (504)
+.|+|+.++. .++++.| .+||.|++.+|.++.+. ++.||.++++.+..+++-
T Consensus 12 ~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~~ 67 (78)
T 1e4u_A 12 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAVY 67 (78)
T ss_dssp CBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSCC
T ss_pred CcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchhh
Confidence 3699999977 3455543 49999999999999864 467999999999877653
No 373
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=97.33 E-value=0.00023 Score=49.34 Aligned_cols=44 Identities=23% Similarity=0.379 Sum_probs=40.8
Q ss_pred ccccCCCCCCCceEe--CCCCee-eeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVS--KNSGLL-FEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
.|.|+.+-+.++|+. | +||. |...++.++...+++||+++++++
T Consensus 10 ~C~IC~~~~~~~~~~~~p-CgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 10 PCVICQGRPKNGCIVHGK-TGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp CCTTTSSSCSCEEEEETT-EEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CCCcCCCCCCCEEEECCC-CCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 599999999999987 8 9999 899999999998899999999875
No 374
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.31 E-value=0.016 Score=55.50 Aligned_cols=243 Identities=12% Similarity=0.058 Sum_probs=113.5
Q ss_pred CCCEEEEEeCC-CcEEEEcCCC-CceEEEcccCc--cc-eeEEEEeeCCCEEEEEeC-C---------CcEEEEeCCCCC
Q 010669 234 SKDVIATGGVD-TNAVLFDRPS-GQIVTTLSGHS--KK-VTSVKFVTEGDLFLTGSA-D---------KTVRVWQGSEDG 298 (504)
Q Consensus 234 ~~~~l~sg~~d-g~i~vwd~~~-~~~~~~~~~h~--~~-v~~l~~s~~~~~l~s~s~-d---------g~i~iwd~~~~~ 298 (504)
++.+++.|+.+ ..+.+||..+ ......+..-. .. -.+++. -++.+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~- 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN- 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT-
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC-
Confidence 56676777643 4688899864 12222332111 11 112222 26777777765 2 46888998763
Q ss_pred CcceeEEeccCCcCeEEEEEccCCCEEEEEeCC---------------------------------------CeEEEEEC
Q 010669 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD---------------------------------------NTWCFYDL 339 (504)
Q Consensus 299 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d---------------------------------------g~i~iwd~ 339 (504)
.+..+..+......-.++.. .+++.++.|+.+ ..+.+||.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 33333322211111122222 467888888764 57899999
Q ss_pred CCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC------CCcEEEEEc--CCCc--eeeeeeCCCCCeEEEEEcC
Q 010669 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS------EALVKIWDV--KSQA--NVAKFDGHVGAVTAISFSE 409 (504)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~------dg~I~iwd~--~~~~--~~~~~~~~~~~i~~l~~s~ 409 (504)
.+.+-...-... . ..... .+++.. ++.+++.|+. ...+.+||+ .+.+ .+..+..........+...
T Consensus 176 ~~~~W~~~~~~p-~-~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~ 251 (357)
T 2uvk_A 176 STQQWSYAGESP-W-YGTAG-AAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGIS 251 (357)
T ss_dssp TTTEEEEEEECS-S-CCCBS-CEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEE
T ss_pred CCCcEEECCCCC-C-CCccc-ccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEE
Confidence 887644332211 0 11111 222222 5677777764 345777887 3322 2222211111111111222
Q ss_pred CCcEEEEEeCC-----------------------cEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeCc---
Q 010669 410 NGYYLATAAHD-----------------------GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--- 463 (504)
Q Consensus 410 ~g~~l~s~~~d-----------------------~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~d--- 463 (504)
++.+++.|+.+ .+.+||+.+.+-...-...........+ ..++++++.||.+
T Consensus 252 ~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 252 NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGG 329 (357)
T ss_dssp TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGG
T ss_pred CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCC
Confidence 66777777621 2778998865432221222111222222 3467777778754
Q ss_pred ---EEEEEeeccCccceeEEEccCC
Q 010669 464 ---IRVYQVASVKADWNCIKTFPDL 485 (504)
Q Consensus 464 ---i~vw~~~~~~~~~~~i~~~~~h 485 (504)
-.+|-+....+.|..+..+.+|
T Consensus 330 ~~~~~v~~l~~~~~~~~~~~~~~~~ 354 (357)
T 2uvk_A 330 KAVTDSVLITVKDNKVTVQNLEHHH 354 (357)
T ss_dssp CEEEEEEEEEC-CCSCEEEC-----
T ss_pred CEeeeEEEEEEcCcEeEeeeccccc
Confidence 2344343344677777777665
No 375
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.30 E-value=0.00022 Score=49.30 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=40.4
Q ss_pred ccccCCCCCCCceEe--CCCCee-eeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVS--KNSGLL-FEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
.|.|+.+-+.++++- | +||. |.+.++.++.+.+++||+++++++
T Consensus 9 ~C~IC~~~~~~~~~~~~p-CgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 9 PCSLCEKRPRDGNIIHGR-TGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp BCTTTSSSBSCEEEEETT-EEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CCcccCCcCCCeEEEecC-CCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 599999999999887 7 9998 999999999998889999999875
No 376
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.29 E-value=0.13 Score=48.78 Aligned_cols=229 Identities=8% Similarity=0.070 Sum_probs=125.7
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCCCce--EEEc----ccCccceeEEEEeeC---CCEEEEE---eCCCcEEE
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI--VTTL----SGHSKKVTSVKFVTE---GDLFLTG---SADKTVRV 291 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~----~~h~~~v~~l~~s~~---~~~l~s~---s~dg~i~i 291 (504)
..-..|+|.|+|+++++--..|.|++++..+++. +..+ .........|+|+|+ +..|+.. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3467999999999877765589999998665543 2222 123456899999984 3334332 23455555
Q ss_pred EeCCCCC-------CcceeE-Eec-cCCcCeEEEEEccCCCEEEEEeC-------------CCeEEEEECCCC-------
Q 010669 292 WQGSEDG-------NYDCKH-TLK-DHTAEVQAVTVHATNKYFVTASL-------------DNTWCFYDLSSG------- 342 (504)
Q Consensus 292 wd~~~~~-------~~~~~~-~~~-~h~~~v~~l~~~p~~~~l~s~s~-------------dg~i~iwd~~~~------- 342 (504)
|...... ..+.+. .+. .....-..|.|.|+|.++++.+. .|.|.-.+....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 6554311 111111 121 11123467999999987777543 344554554422
Q ss_pred --eEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCc------------------eeeeeeCCCCC
Q 010669 343 --ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKSQA------------------NVAKFDGHVGA 401 (504)
Q Consensus 343 --~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~~~~~------------------~~~~~~~~~~~ 401 (504)
..+... ++ .....++|+|+|.++++=. .++.=.|.-+..+. ++..+..+...
T Consensus 192 ~~~~i~a~------G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 192 PGSPVYSY------GH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp TTCCEEEB------CC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred CCCeEEee------CC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 011111 22 2356899999988766542 23322232222221 12233323246
Q ss_pred eEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcce---eeeecCCCCCCeeEEEECCCCCEEEEEe
Q 010669 402 VTAISFSENGYYLATAAHDG-VKLWDLRKLKNF---RSFESSDSETPTNSVDFDHSGSYLAVAS 461 (504)
Q Consensus 402 i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~---~~~~~~~~~~~v~~i~~~~~g~~l~~~~ 461 (504)
...++|. +|..++..-... |....+.....+ ..+ .......+..+...|||.++++..
T Consensus 265 p~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~-l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 265 PSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAF-LEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEE-STTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcceEEE-cCceeeccccCCEEEEEEecCCceecceEEe-ecCCCCCccEEEECCCCcEEEEEc
Confidence 6788887 465555554444 666666544321 111 111246789999999997766654
No 377
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.29 E-value=0.00014 Score=55.02 Aligned_cols=51 Identities=14% Similarity=0.221 Sum_probs=40.0
Q ss_pred CccccCCCCCCCceEe--CCCCeeeeHHHHHHHHHhc---C-----CCCC--CCCC--CCCCccc
Q 010669 1 MNCSISGEVPEEPVVS--KNSGLLFEKRLIERHILDY---G-----KCPV--TGEP--LTMDDIV 51 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~-----~~p~--~~~~--~~~~~~~ 51 (504)
+.|+|+.+....|++. ..+||.|++.+|.+|++.. | +||. ++.. ++.+++.
T Consensus 6 ~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~ 70 (94)
T 1wim_A 6 SGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIE 70 (94)
T ss_dssp CCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHH
T ss_pred cCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHH
Confidence 4699999998888775 2499999999999999852 2 5999 8877 6555443
No 378
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.27 E-value=0.062 Score=50.02 Aligned_cols=186 Identities=12% Similarity=0.153 Sum_probs=100.7
Q ss_pred CCCEEEEEeCC----CcEEEEcCCCCceEE--EcccCccceeEEEEeeCCCEEEEEeCC------CcEEEEeCCCCCCcc
Q 010669 234 SKDVIATGGVD----TNAVLFDRPSGQIVT--TLSGHSKKVTSVKFVTEGDLFLTGSAD------KTVRVWQGSEDGNYD 301 (504)
Q Consensus 234 ~~~~l~sg~~d----g~i~vwd~~~~~~~~--~~~~h~~~v~~l~~s~~~~~l~s~s~d------g~i~iwd~~~~~~~~ 301 (504)
++.+++.|+.+ ..+.+||..+.+-.. .+......-..+. -++.+++.|+.+ ..+.+||..+. .+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTE-SWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTT-EEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCC-ceE
Confidence 56777778755 568889988765322 2221111112222 267777777765 46888998763 333
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeC---------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASL---------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
.+..+.........+.+ ++..++.|+. -..+.+||+.+..-...-. ..........+.+ +++++
T Consensus 132 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~i~ 204 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP---MIEARKNHGLVFV--KDKIF 204 (306)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEE
T ss_pred eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC---ccchhhcceEEEE--CCEEE
Confidence 33222211111122222 5667777654 3458899998875433321 1111112222222 67788
Q ss_pred EEEeCC-----CcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----c-EEEEEcCCCc
Q 010669 373 GTGTSE-----ALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD-----G-VKLWDLRKLK 431 (504)
Q Consensus 373 ~~g~~d-----g~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~ 431 (504)
+.|+.+ ..+.+||+.+.+ .+..+.........+.+ ++.+++.|+.+ . +.+||+.+.+
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 887754 468899987753 22222222222333344 67777777743 3 8899987754
No 379
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.25 E-value=0.00015 Score=57.14 Aligned_cols=45 Identities=13% Similarity=0.109 Sum_probs=37.1
Q ss_pred ccccCCCCCCCce------------------EeCCCCeeeeHHHHHHHHH-----hcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPV------------------VSKNSGLLFEKRLIERHIL-----DYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~-----~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.+|+ +. .+||+|.+.+|.+|+. .+.+||+++..+..
T Consensus 27 ~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 27 DCIICMEKLAVASGYSDMTDSKALGPMVVGRLT-KCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp EETTTTEETTSCCSTTTTCCCSSSCSSCCEEES-SSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred cCccCChhhcCcccccccccccccCcccceecC-CCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 4999999887765 45 5999999999999995 35689999987763
No 380
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.23 E-value=0.029 Score=52.17 Aligned_cols=186 Identities=16% Similarity=0.238 Sum_probs=98.9
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCceEEE--cccCccceeEEEEeeCCCEEEEEeCCC-----cEEEEeCCCCCCcc
Q 010669 234 SKDVIATGGVD-----TNAVLFDRPSGQIVTT--LSGHSKKVTSVKFVTEGDLFLTGSADK-----TVRVWQGSEDGNYD 301 (504)
Q Consensus 234 ~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~s~dg-----~i~iwd~~~~~~~~ 301 (504)
++.+++.|+.+ ..+.+||..+.+-... +......-..+. -++.+++.|+.++ .+.+||+.+. .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSN-EWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTT-EEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCC-eEe
Confidence 57777777754 3588899877653222 111111112222 2677777777553 5778888763 333
Q ss_pred eeEEeccCCcCeEEEEEccCCCEEEEEeCC-------CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEE
Q 010669 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLD-------NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374 (504)
Q Consensus 302 ~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~ 374 (504)
.+..+.........+.+ ++..++.|+.+ ..+.+||+.+..-...-. ..........+.+ ++.+++.
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~iyv~ 210 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE---MSTRRSGAGVGVL--NNLLYAV 210 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEEEE
T ss_pred ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC---CccccccccEEEE--CCEEEEE
Confidence 33322221111222222 56677776643 358899998876443321 1111112222333 5778888
Q ss_pred EeCC-----CcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----c-EEEEEcCCCc
Q 010669 375 GTSE-----ALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAHD-----G-VKLWDLRKLK 431 (504)
Q Consensus 375 g~~d-----g~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~ 431 (504)
|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ . +.+||+.+.+
T Consensus 211 GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 8764 3689999976532 2222111111222333 67777777643 2 8999988654
No 381
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.20 E-value=0.045 Score=52.82 Aligned_cols=146 Identities=14% Similarity=0.213 Sum_probs=90.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCcceeEEecc--CCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----------
Q 010669 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD--HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI---------- 343 (504)
Q Consensus 276 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~---------- 343 (504)
+|..++.+- ++.||.-++..+..++.... .. .-+.|..+..+|+|++++..+. ..|.|..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~-~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNF-SRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEEC-TTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEec-CcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 444444432 35666666654333332221 11 1235778999999999998865 578888876321
Q ss_pred --EEEEeecCCC-CCCCCCeEEEEECC---CCCEEEEEeCCCcEEEEEcCCC--ceeeeee---------CCCCCeEEEE
Q 010669 344 --CLTQVSDAGT-DGRPEGYTSAAFHP---DGLILGTGTSEALVKIWDVKSQ--ANVAKFD---------GHVGAVTAIS 406 (504)
Q Consensus 344 --~~~~~~~~~~-~~~~~~v~~~~~~p---dg~~l~~g~~dg~I~iwd~~~~--~~~~~~~---------~~~~~i~~l~ 406 (504)
....+..... .....+|..+.||| .+..|++-..|+.|++||+... ++. .++ .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 1112221111 11356899999999 4568999999999999999752 222 221 2235789999
Q ss_pred EcCCCcEEEEEe--CCc-EEEE
Q 010669 407 FSENGYYLATAA--HDG-VKLW 425 (504)
Q Consensus 407 ~s~~g~~l~s~~--~d~-v~vw 425 (504)
|..+|-.|...+ .+| |+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999887777755 667 7544
No 382
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.17 E-value=0.00017 Score=51.69 Aligned_cols=41 Identities=27% Similarity=0.279 Sum_probs=37.6
Q ss_pred CccccCCCCCCCceEeCCCCee-eeHHHHHHHHHhcCCCCCCCCCCC
Q 010669 1 MNCSISGEVPEEPVVSKNSGLL-FEKRLIERHILDYGKCPVTGEPLT 46 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~ 46 (504)
+.|+|+.+.+.+||+.| +||+ |.+.+|.+| .+||+++++++
T Consensus 25 ~~C~iC~~~~~~~~~~p-CgH~~~C~~C~~~~----~~CP~Cr~~i~ 66 (74)
T 4ic3_A 25 KLCKICMDRNIAIVFVP-CGHLVTCKQCAEAV----DKCPMCYTVIT 66 (74)
T ss_dssp TBCTTTSSSBCCEEEET-TCCBCCCHHHHTTC----SBCTTTCCBCS
T ss_pred CCCCCCCCCCCCEEEcC-CCChhHHHHhhhcC----ccCCCcCcCcc
Confidence 46999999999999997 9999 999999988 77999998876
No 383
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.05 E-value=0.088 Score=49.31 Aligned_cols=227 Identities=16% Similarity=0.185 Sum_probs=110.8
Q ss_pred EEEEEeCCCcEEEEcCCCCceEE-EcccCccceeEEEEeeCCCEEEEEeC----CC-------cEEEEeCCCCCCcceeE
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVT-TLSGHSKKVTSVKFVTEGDLFLTGSA----DK-------TVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~s~----dg-------~i~iwd~~~~~~~~~~~ 304 (504)
+++.|+. .+..||..+++-.. .+..............++.+++.|+. ++ .+.+||..+. .+..+.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC-cEEECC
Confidence 4445553 37889988776433 11111111222223346777777773 12 1677887663 333322
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCC-------CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLD-------NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~ 377 (504)
.+.........+.+ ++..++.|+.+ ..+.+||..+.+-...-. ........ +++. .++.+++.|+.
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~-~~~~-~~~~iyv~GG~ 167 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN---LPIKVYGH-NVIS-HNGMIYCLGGK 167 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC---CSSCEESC-EEEE-ETTEEEEECCE
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC---CCCccccc-EEEE-ECCEEEEEcCC
Confidence 22211111122222 56777777754 258889998876443221 10111111 2222 46777777764
Q ss_pred ------CCcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----c-EEEEEcCCCcceeeeecCCCCC
Q 010669 378 ------EALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD-----G-VKLWDLRKLKNFRSFESSDSET 443 (504)
Q Consensus 378 ------dg~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~~~~~~~~~~~~~ 443 (504)
-..+.+||+.+.+ .+..+.........+.+ ++.+++.|+.+ . +.+||+.+.+-...-..+....
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 245 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS 245 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 2458999987753 22222211112223333 66777777542 2 7889988754222111111111
Q ss_pred CeeEEEECCCCCEEEEEeCc----------------EEEEEeeccCccceeE
Q 010669 444 PTNSVDFDHSGSYLAVASAD----------------IRVYQVASVKADWNCI 479 (504)
Q Consensus 444 ~v~~i~~~~~g~~l~~~~~d----------------i~vw~~~~~~~~~~~i 479 (504)
....+.+ ++.+++.||.+ +.+||. .+..|..+
T Consensus 246 ~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~--~~~~W~~~ 293 (318)
T 2woz_A 246 SISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED--DKKEWAGM 293 (318)
T ss_dssp SCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEEET--TTTEEEEE
T ss_pred ceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEEEEeC--CCCEehhh
Confidence 1222222 45666666531 445554 45779887
No 384
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.02 E-value=0.074 Score=49.59 Aligned_cols=186 Identities=15% Similarity=0.200 Sum_probs=98.7
Q ss_pred CCCEEEEEeC----C-----CcEEEEcCCCCceEEE--cccCccceeEEEEeeCCCEEEEEeCC-----CcEEEEeCCCC
Q 010669 234 SKDVIATGGV----D-----TNAVLFDRPSGQIVTT--LSGHSKKVTSVKFVTEGDLFLTGSAD-----KTVRVWQGSED 297 (504)
Q Consensus 234 ~~~~l~sg~~----d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~s~d-----g~i~iwd~~~~ 297 (504)
++.+++.|+. + ..+.+||..+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5677777775 2 4588899877643221 1111111122222 67777777643 35788888763
Q ss_pred CCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD-----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 298 ~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
.+..+..+......-..+.+ ++..++.|+.+ ..+.+||+.+..-...-. .........++.+ ++.++
T Consensus 148 -~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~iy 219 (308)
T 1zgk_A 148 -EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA---MNTIRSGAGVCVL--HNCIY 219 (308)
T ss_dssp -EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE--TTEEE
T ss_pred -eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC---CCCccccceEEEE--CCEEE
Confidence 33333222211112222222 56777777654 458899998875433211 1111122223333 67788
Q ss_pred EEEeCC-----CcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeCC-----c-EEEEEcCCCc
Q 010669 373 GTGTSE-----ALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAHD-----G-VKLWDLRKLK 431 (504)
Q Consensus 373 ~~g~~d-----g~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-----~-v~vwd~~~~~ 431 (504)
+.|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ . +.+||+.+.+
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 888765 5689999877532 2222211112223333 67777777643 2 7889987654
No 385
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.95 E-value=0.037 Score=58.23 Aligned_cols=227 Identities=10% Similarity=0.066 Sum_probs=116.5
Q ss_pred cCCCEEEEEeCC----CcEEEEcCCCCceEEEc-c-----cC-ccceeEEEEee-CCCEEEEEeCCC------cEEEEeC
Q 010669 233 YSKDVIATGGVD----TNAVLFDRPSGQIVTTL-S-----GH-SKKVTSVKFVT-EGDLFLTGSADK------TVRVWQG 294 (504)
Q Consensus 233 ~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~-~-----~h-~~~v~~l~~s~-~~~~l~s~s~dg------~i~iwd~ 294 (504)
.++.+++.||.+ ..+.+||..+++-...- . .. ...-.+++..+ ++.+++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 457778888753 45888888776543222 1 01 11122333333 677777777543 5778888
Q ss_pred CCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCCC--eEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCC-CCE
Q 010669 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDN--TWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD-GLI 371 (504)
Q Consensus 295 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pd-g~~ 371 (504)
.+. .|..+..+...... .+++...++..++.|+.++ .+.+||..+..-.................++.+..+ +.+
T Consensus 476 ~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 763 34333322211111 2223323788888887655 699999998764332210000011122334555655 778
Q ss_pred EEEEeC--C-----CcEEEEEcCCCce-----eeeeeC----CCCCeEEEEEcCCCcEEEEEeC--------Cc-EEEEE
Q 010669 372 LGTGTS--E-----ALVKIWDVKSQAN-----VAKFDG----HVGAVTAISFSENGYYLATAAH--------DG-VKLWD 426 (504)
Q Consensus 372 l~~g~~--d-----g~I~iwd~~~~~~-----~~~~~~----~~~~i~~l~~s~~g~~l~s~~~--------d~-v~vwd 426 (504)
++.|+. + +.+.+||+.+..- ...+.. .......+.+ .++.+++.|+. .. |.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 888876 2 4588999987661 122211 1112223333 33777777763 13 99999
Q ss_pred cCCCcceeeeecCCC-------CCCeeEEEECCCCCEEEEEeCc
Q 010669 427 LRKLKNFRSFESSDS-------ETPTNSVDFDHSGSYLAVASAD 463 (504)
Q Consensus 427 ~~~~~~~~~~~~~~~-------~~~v~~i~~~~~g~~l~~~~~d 463 (504)
+.+.+-. ....... ...-.+.....+|++++.||..
T Consensus 633 ~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 633 PLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp TTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred CCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 9876432 2211100 0001334444566777777643
No 386
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.94 E-value=0.044 Score=52.88 Aligned_cols=151 Identities=16% Similarity=0.097 Sum_probs=96.9
Q ss_pred ccCCCEEEEEeCCCcEEEEcCCCCceEEEcccC----ccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCc-------
Q 010669 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGH----SKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY------- 300 (504)
Q Consensus 232 s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h----~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~------- 300 (504)
..+|..++.+- ++.|+.-++......+.++.. -..|..+..+|+|++|+..+. ..|.|-.+..+...
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 34566555553 467887777644334444322 235888999999999888765 47888887632100
Q ss_pred --ceeEEecc------CCcCeEEEEEccC---CCEEEEEeCCCeEEEEECCCCeE-EEEeec----CCCCCCCCCeEEEE
Q 010669 301 --DCKHTLKD------HTAEVQAVTVHAT---NKYFVTASLDNTWCFYDLSSGIC-LTQVSD----AGTDGRPEGYTSAA 364 (504)
Q Consensus 301 --~~~~~~~~------h~~~v~~l~~~p~---~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~----~~~~~~~~~v~~~~ 364 (504)
...+.+.- ...+|..+.|||- +..|++-..|+.|++||+..... ...+.. .+.......+.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 01122221 2467999999995 46899999999999999986221 112211 01223346789999
Q ss_pred ECCCCCEEEEEe--CCCcEEEE
Q 010669 365 FHPDGLILGTGT--SEALVKIW 384 (504)
Q Consensus 365 ~~pdg~~l~~g~--~dg~I~iw 384 (504)
|.++|-.|.+.+ .+|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999988777755 77887654
No 387
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.93 E-value=0.32 Score=47.01 Aligned_cols=200 Identities=9% Similarity=0.045 Sum_probs=122.1
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCC-CceEEEcccCc----cceeEEEEeeCCCEEEEEe-------CCCcEEEE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPS-GQIVTTLSGHS----KKVTSVKFVTEGDLFLTGS-------ADKTVRVW 292 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~----~~v~~l~~s~~~~~l~s~s-------~dg~i~iw 292 (504)
+|..=.|-. .+.|+..+ +..|+-|++.. ..+++.+..|. ..|..-..+++.++++..| -.|.+.+|
T Consensus 107 ~VvfWkWis-~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 107 DVTFWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp CCCEEEEEE-TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred CceEEEecC-CCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 344444433 33444443 45799999864 35556665443 4566667778888766443 24788999
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEccCC---CEEEEEeCC---CeEEEEECCCC--------eEEEEeecCCCCCCCC
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATN---KYFVTASLD---NTWCFYDLSSG--------ICLTQVSDAGTDGRPE 358 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---~~l~s~s~d---g~i~iwd~~~~--------~~~~~~~~~~~~~~~~ 358 (504)
..+. ...+.+.+|...-..+.+..+. ..|..+... +.+++.++... +....+... .+...+
T Consensus 185 S~er----~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp-pe~~~D 259 (494)
T 1bpo_A 185 SVDR----KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP-PEAQND 259 (494)
T ss_dssp ESTT----CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC-TTSTTC
T ss_pred eccc----cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC-cccccC
Confidence 9887 4566778887655444443211 244444442 78999998543 111111111 223344
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc
Q 010669 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~ 431 (504)
-..++..++.-..+..-+.-|.|++||+.++.++..-+-...+|..-+.+.+..-++.....| |.-..+....
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 567888888878888889999999999999999887765566666655555433444444555 5544554433
No 388
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.92 E-value=0.00049 Score=49.48 Aligned_cols=41 Identities=27% Similarity=0.310 Sum_probs=36.5
Q ss_pred ccccCCCCCCCceEeCCCCee-eeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLL-FEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.+||+.| +||+ |.+.+|.+ ..+||+++++++.
T Consensus 27 ~C~IC~~~~~~~~~~p-CgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 27 LCKICMDRNIAIVFVP-CGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp SCSSSCSSCCCBCCSS-SCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCcCCCCCCCEEEec-CCCHHHHHHHhhC----CCCCccCCceecC
Confidence 5999999999999997 9999 99999964 4689999998864
No 389
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=96.86 E-value=0.00016 Score=56.50 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=0.0
Q ss_pred ccccCCCCCCC-----------------ceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEE-----------------PVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|+|+.+.+.+ +++.+.+||.|-+.+|.+||..+.+||+++.+...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 112 (117)
T ss_dssp ---------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeee
Confidence 48888888766 44545699999999999999999999999987654
No 390
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.81 E-value=0.22 Score=46.41 Aligned_cols=188 Identities=12% Similarity=0.192 Sum_probs=97.0
Q ss_pred ccCCCEEEEEeC----C-------CcEEEEcCCCCceEEEcccCccc-e-eEEEEeeCCCEEEEEeCC--------CcEE
Q 010669 232 HYSKDVIATGGV----D-------TNAVLFDRPSGQIVTTLSGHSKK-V-TSVKFVTEGDLFLTGSAD--------KTVR 290 (504)
Q Consensus 232 s~~~~~l~sg~~----d-------g~i~vwd~~~~~~~~~~~~h~~~-v-~~l~~s~~~~~l~s~s~d--------g~i~ 290 (504)
..++.+++.|+. + ..+.+||..+.+-. .+.....+ . .+++. -++.+++.|+.+ ..+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEE
Confidence 347788888873 1 12778888776532 22211111 1 11222 266677777632 4588
Q ss_pred EEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeC-C-----CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEE
Q 010669 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL-D-----NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA 364 (504)
Q Consensus 291 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 364 (504)
+||..+. .+..+..+.........+. .+++.++.|+. + ..+.+||+.+..-...-. .........++.
T Consensus 121 ~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~ 194 (315)
T 4asc_A 121 CYDRLSF-KWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP---MQTARSLFGATV 194 (315)
T ss_dssp EEETTTT-EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEE
T ss_pred EECCCCC-cEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC---CCCchhceEEEE
Confidence 8998763 3333332222111122222 35677777776 2 468999998875433221 111111222222
Q ss_pred ECCCCCEEEEEeCCC-----cEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC--------------c-E
Q 010669 365 FHPDGLILGTGTSEA-----LVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD--------------G-V 422 (504)
Q Consensus 365 ~~pdg~~l~~g~~dg-----~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d--------------~-v 422 (504)
+ ++++++.|+.++ .+.+||+.+.+ .+..+.........+.+ ++.+++.|+.+ . +
T Consensus 195 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v 270 (315)
T 4asc_A 195 H--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDI 270 (315)
T ss_dssp E--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred E--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcE
Confidence 2 677888887654 58889987753 22222211122233333 66777776642 2 6
Q ss_pred EEEEcCCCc
Q 010669 423 KLWDLRKLK 431 (504)
Q Consensus 423 ~vwd~~~~~ 431 (504)
.+||+.+.+
T Consensus 271 ~~yd~~~~~ 279 (315)
T 4asc_A 271 WRYNEEEKK 279 (315)
T ss_dssp EEEETTTTE
T ss_pred EEecCCCCh
Confidence 778877654
No 391
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.79 E-value=0.96 Score=50.30 Aligned_cols=207 Identities=13% Similarity=0.089 Sum_probs=116.3
Q ss_pred EEEEeCCCcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeCC----------------------------
Q 010669 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD---------------------------- 331 (504)
Q Consensus 280 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~d---------------------------- 331 (504)
++. ..++.++|..+.....+ .+..+. -...+..++++|..+.++.+..+
T Consensus 709 ~v~-~~~~~LrI~~i~~~~~~-~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 709 LAL-ANNSTLTIGTIDEIQKL-HIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp EEE-ECSSCEEEEEECCSSSE-EEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred EEE-EcCCceEEEEecccCCe-eEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 443 33456999887654322 233332 23567888888877765544311
Q ss_pred ---------------------CeEEEEECCCCeEEEEeecCCCCCCCCCeEEEE---ECCC-CCEEEEEe----------
Q 010669 332 ---------------------NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA---FHPD-GLILGTGT---------- 376 (504)
Q Consensus 332 ---------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~---~~pd-g~~l~~g~---------- 376 (504)
+.|++.|-.+.+.+..+... ....+.|++ |..+ ..+|++|+
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~----~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~ 861 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL----QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEP 861 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETTTCCEEEEEECC----TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSC
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCC----CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCC
Confidence 23667777766666555421 223445544 3332 46888886
Q ss_pred CCCcEEEEEcCCCceeeee-eCCCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCC
Q 010669 377 SEALVKIWDVKSQANVAKF-DGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455 (504)
Q Consensus 377 ~dg~I~iwd~~~~~~~~~~-~~~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~ 455 (504)
..|.|.+|++..++..... ....++|++++-- +| +|++|-...|++|++...+.++ ..... -..+..+.....|+
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~-~~~~~-~~~i~~~~l~~~~~ 937 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELR-TECNH-YNNIMALYLKTKGD 937 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEE-EEEEE-CCCSCEEEEEEETT
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEE-EEeec-cccEEEEEEeccCC
Confidence 3588999999744322211 1246789888743 56 5555555559999998765444 22111 11133333334678
Q ss_pred EEEEEeCc--EEEEEeeccCccceeEEEccCCCCCCceeEEEEeecC
Q 010669 456 YLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLFVLG 500 (504)
Q Consensus 456 ~l~~~~~d--i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g 500 (504)
++++|..- +.++.+.........+. .+.....++++.|..++
T Consensus 938 ~I~vgD~~~Sv~~~~y~~~~~~L~~~a---~D~~~~~vta~~~ld~~ 981 (1158)
T 3ei3_A 938 FILVGDLMRSVLLLAYKPMEGNFEEIA---RDFNPNWMSAVEILDDD 981 (1158)
T ss_dssp EEEEEESSBCEEEEEEETTTTEEEEEE---ECCSCBCEEEEEEEETT
T ss_pred EEEEEEhhheEEEEEEEcCCCeEEEEE---eecccccEEEEEEEccC
Confidence 88888765 77777744332222222 22235677888776554
No 392
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.78 E-value=0.39 Score=45.71 Aligned_cols=150 Identities=9% Similarity=0.044 Sum_probs=80.7
Q ss_pred cceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEE----eccCCcCeEEEEEccC---CCEEEEE-eC-------
Q 010669 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHT----LKDHTAEVQAVTVHAT---NKYFVTA-SL------- 330 (504)
Q Consensus 266 ~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~h~~~v~~l~~~p~---~~~l~s~-s~------- 330 (504)
...+.|+|.|+|+.|+++...|.|++++.... ....+.. +.........|+++|+ +..|+.+ +.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 34689999999983445566799999985321 0011111 1122345789999996 4444443 22
Q ss_pred CCeEEEEECCCC--e--EEEEe-ecCCC-CCCCCCeEEEEECCCCCEEEEEeC-------------CCcEEEEEcCCCc-
Q 010669 331 DNTWCFYDLSSG--I--CLTQV-SDAGT-DGRPEGYTSAAFHPDGLILGTGTS-------------EALVKIWDVKSQA- 390 (504)
Q Consensus 331 dg~i~iwd~~~~--~--~~~~~-~~~~~-~~~~~~v~~~~~~pdg~~l~~g~~-------------dg~I~iwd~~~~~- 390 (504)
...|..|++..+ . ....+ ..... .........++|.|||.++++-+. .|.|.-+|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235777776543 1 11111 11100 011122457999999976666433 2467667764320
Q ss_pred -----------eeeee-eCCCCCeEEEEEcC-CCcEEEEE
Q 010669 391 -----------NVAKF-DGHVGAVTAISFSE-NGYYLATA 417 (504)
Q Consensus 391 -----------~~~~~-~~~~~~i~~l~~s~-~g~~l~s~ 417 (504)
....+ .++ .....++|+| +|.++++-
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEe
Confidence 11112 233 2477899999 66655543
No 393
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.62 E-value=1.2 Score=49.40 Aligned_cols=260 Identities=14% Similarity=0.120 Sum_probs=142.1
Q ss_pred CCCeEEEEeccC------CCEEEEEeC-CCcEEEEcCCCCceEEEccc-CccceeEEEEee--CCCEEEEEeCCCcEEEE
Q 010669 223 KPGIVSLDIHYS------KDVIATGGV-DTNAVLFDRPSGQIVTTLSG-HSKKVTSVKFVT--EGDLFLTGSADKTVRVW 292 (504)
Q Consensus 223 ~~~I~~~~~s~~------~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~s~--~~~~l~s~s~dg~i~iw 292 (504)
...|.|+++.+. ++++++|.. |++++|+++.+.+.+....- ......++.+.. ...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 369999996 99999999987766544321 122345555443 23478899999998766
Q ss_pred eCCCC-CCcceeE-EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCC-
Q 010669 293 QGSED-GNYDCKH-TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG- 369 (504)
Q Consensus 293 d~~~~-~~~~~~~-~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg- 369 (504)
.++.. +.....+ .+.| ..++.-..+...+..-+.+..+..+.+|.-+. +....-.. . ..--....|+...
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~-~l~~s~l~--~---~~v~~~~~F~se~~ 705 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNH-KLVFSNVN--L---KEVNYMCPLNSDGY 705 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSS-SEEEEEBS--S---SCCCEEEEECCSSS
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCC-ceEEeccC--h---HHhceEeccCcccC
Confidence 55421 1111111 2223 34555555544444333334455555554433 22222110 1 1122344554421
Q ss_pred -CEEEEEeCCCcEEEEEcCCCce--eeeeeCCCCCeEEEEEcCCCcEEEEEeC---------------------------
Q 010669 370 -LILGTGTSEALVKIWDVKSQAN--VAKFDGHVGAVTAISFSENGYYLATAAH--------------------------- 419 (504)
Q Consensus 370 -~~l~~g~~dg~I~iwd~~~~~~--~~~~~~~~~~i~~l~~s~~g~~l~s~~~--------------------------- 419 (504)
.-++..+ ++.++|..+..... +.++. -...+..++++|+...++.+..
T Consensus 706 ~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1158)
T 3ei3_A 706 PDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV 783 (1158)
T ss_dssp TTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred CCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence 2344333 45588887754322 22222 2346777777776554333220
Q ss_pred ----------------------Cc-EEEEEcCCCcceeeeecCCCCCCeeEEE---ECCC-CCEEEEEe-----C-c---
Q 010669 420 ----------------------DG-VKLWDLRKLKNFRSFESSDSETPTNSVD---FDHS-GSYLAVAS-----A-D--- 463 (504)
Q Consensus 420 ----------------------d~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~---~~~~-g~~l~~~~-----~-d--- 463 (504)
.+ |++.|..+.+.+..+.... ...+.+++ |..+ ..++++|. . +
T Consensus 784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~-nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~ 862 (1158)
T 3ei3_A 784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ-NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPK 862 (1158)
T ss_dssp CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCT-TEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCC
T ss_pred cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCC-CcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCC
Confidence 12 7778877777776666543 23344444 4332 47888886 1 2
Q ss_pred ---EEEEEeeccCccceeEEEccCCCCCCceeEEEEe
Q 010669 464 ---IRVYQVASVKADWNCIKTFPDLSGTGAASFLFLF 497 (504)
Q Consensus 464 ---i~vw~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~ 497 (504)
|.+|++. ....+.+....- .+.|++++-+
T Consensus 863 ~Gri~vf~v~--~~kL~lv~~~~v---~g~v~al~~~ 894 (1158)
T 3ei3_A 863 QGRIVVFQYS--DGKLQTVAEKEV---KGAVYSMVEF 894 (1158)
T ss_dssp CEEEEEEEEE--TTEEEEEEEEEE---SSCEEEEEEE
T ss_pred ceEEEEEEEE--CCEEEEEEEEEc---CCcCEEEeee
Confidence 7788875 234555554433 6788888766
No 394
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.61 E-value=0.086 Score=50.25 Aligned_cols=198 Identities=12% Similarity=0.080 Sum_probs=97.0
Q ss_pred CCCEEEEEeC-C---------CcEEEEcCCCCceEEEcccC-ccceeEEEEeeCCCEEEEEeCC----------------
Q 010669 234 SKDVIATGGV-D---------TNAVLFDRPSGQIVTTLSGH-SKKVTSVKFVTEGDLFLTGSAD---------------- 286 (504)
Q Consensus 234 ~~~~l~sg~~-d---------g~i~vwd~~~~~~~~~~~~h-~~~v~~l~~s~~~~~l~s~s~d---------------- 286 (504)
++.+++.|+. + ..+.+||..+.+-...-... .......+...++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 144 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGK 144 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCC
Confidence 5677777775 2 46888998776433221111 1111121222477888888765
Q ss_pred -----------------------CcEEEEeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeC------CCeEEEE
Q 010669 287 -----------------------KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL------DNTWCFY 337 (504)
Q Consensus 287 -----------------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~------dg~i~iw 337 (504)
..+.+||..+ ..+..+..+......-.++... ++.+++.|+. ...+..|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 145 DSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST-QQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp CHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT-TEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEE
T ss_pred cccchhhhhhhhccccccccCCcccEEEEeCCC-CcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEE
Confidence 4688999877 3444444333111110222222 5666677654 3357778
Q ss_pred EC--CCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC----------------------CcEEEEEcCCCc--e
Q 010669 338 DL--SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE----------------------ALVKIWDVKSQA--N 391 (504)
Q Consensus 338 d~--~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d----------------------g~I~iwd~~~~~--~ 391 (504)
|+ .+..-. .+... . .........+...++.+++.|+.+ ..+.+||+.+.+ .
T Consensus 223 d~d~~~~~W~-~~~~~-~-~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~ 299 (357)
T 2uvk_A 223 DFTGNNLKWN-KLAPV-S-SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299 (357)
T ss_dssp ECC---CEEE-ECCCS-S-TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE
T ss_pred EecCCCCcEE-ecCCC-C-CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee
Confidence 87 444322 22211 0 111111111222356777887632 257889987653 3
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEeCC------c-EEEEEcCCCcceeeeec
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAAHD------G-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~~d------~-v~vwd~~~~~~~~~~~~ 438 (504)
+..+......-.++.+ ++.+++.|+.+ . |.++++++.+.+.....
T Consensus 300 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 300 SGELSQGRAYGVSLPW--NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEECSSCCBSSEEEEE--TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred CCCCCCCcccceeEEe--CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 3333322222223333 67777777754 1 56668887776554443
No 395
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.61 E-value=0.96 Score=47.94 Aligned_cols=235 Identities=11% Similarity=0.092 Sum_probs=130.3
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
.|.++....++..|..|+. +-+..++..+++...........|.++....+|.+.+ |+.+ -+.+++..+.. +....
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~-~~~~~ 267 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTP-LQHII 267 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSC-CEEEC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCc-EEEEE
Confidence 4888888877776555654 4578888876654322111234578887776776544 4444 47788876531 11111
Q ss_pred Ee-----ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCC
Q 010669 305 TL-----KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379 (504)
Q Consensus 305 ~~-----~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg 379 (504)
.. .-....|.++....+|.+- .|+..| +.++.....-................|.++.-..+|.+.+. +.+|
T Consensus 268 ~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G 344 (758)
T 3ott_A 268 HDSRNIQSLTNNIIWNIFADQEHNIW-LGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG 344 (758)
T ss_dssp CCTTCTTSCSCSCEEEEEECTTCCEE-EEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE
T ss_pred cCCCCcCcCCcCeEEEEEEcCCCCEE-EEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc
Confidence 00 0122458888887777644 455556 55443322111111110001112346888988888886554 4555
Q ss_pred cEEEEEcCCCc--eeeeeeC-------CCCCeEEEEEcCCCcEEEEEeCCcEEEEEcCCCcceeeeec-CC----CCCCe
Q 010669 380 LVKIWDVKSQA--NVAKFDG-------HVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFES-SD----SETPT 445 (504)
Q Consensus 380 ~I~iwd~~~~~--~~~~~~~-------~~~~i~~l~~s~~g~~l~s~~~d~v~vwd~~~~~~~~~~~~-~~----~~~~v 445 (504)
+..++..++. ....+.. ....|.++.-..+|.+.+ |+.+|+..||..+++... +.. .. ....|
T Consensus 345 -l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt~~GL~~~~~~~~~~~~-~~~~~~~~~~~~~~v 421 (758)
T 3ott_A 345 -LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-ATDGSINRYDYATRQFIH-YNIVDNTGTYNTNWT 421 (758)
T ss_dssp -EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EETTEEEEEETTTTEEEE-EEEECCC--CBSSSE
T ss_pred -ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-EeCCcHhhcCcCCCcEEE-eecCCCcCCCCCceE
Confidence 6666655432 1212210 123588888888887555 445679999988765432 221 10 12458
Q ss_pred eEEEECCCCCEEEEEeCc-EEEEEe
Q 010669 446 NSVDFDHSGSYLAVASAD-IRVYQV 469 (504)
Q Consensus 446 ~~i~~~~~g~~l~~~~~d-i~vw~~ 469 (504)
.++..+.+|.+.+..... +.+|+.
T Consensus 422 ~~i~~d~~g~lWigT~~~Gl~~~~~ 446 (758)
T 3ott_A 422 YYIFEDTAGQLWISTCLGGIFVVDK 446 (758)
T ss_dssp EEEEECTTSEEEEEESSSCEEEEEH
T ss_pred EEEEEcCCCCEEEEECCCceEEEcc
Confidence 888888887765543333 888874
No 396
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.54 E-value=0.23 Score=49.17 Aligned_cols=109 Identities=11% Similarity=0.113 Sum_probs=62.2
Q ss_pred cceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEecc------CCcCeEEEEEccC---CCEEEEEeC------
Q 010669 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD------HTAEVQAVTVHAT---NKYFVTASL------ 330 (504)
Q Consensus 266 ~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~------h~~~v~~l~~~p~---~~~l~s~s~------ 330 (504)
...+.++|.|+|+++++-...+.|.+++..++ ....+..+.. ..+....|+|+|+ +..|+.+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESG-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCC-cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 45679999999987776544457888876432 2222333321 2456789999995 444444432
Q ss_pred -------CCeEEEEECCCC--eE--EE-EeecCCCCCCCCCeEEEEECCCCCEEEEEe
Q 010669 331 -------DNTWCFYDLSSG--IC--LT-QVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376 (504)
Q Consensus 331 -------dg~i~iwd~~~~--~~--~~-~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~ 376 (504)
...|.-|++..+ .. .. .+... ..........++|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~-p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGL-PSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEE-CCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcC-CCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665432 11 11 11111 111223578999999998777654
No 397
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.53 E-value=0.015 Score=50.71 Aligned_cols=182 Identities=10% Similarity=0.063 Sum_probs=100.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCC--Ccc-eeEEeccC--CcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeE------E
Q 010669 277 GDLFLTGSADKTVRVWQGSEDG--NYD-CKHTLKDH--TAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC------L 345 (504)
Q Consensus 277 ~~~l~s~s~dg~i~iwd~~~~~--~~~-~~~~~~~h--~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~------~ 345 (504)
..+|+....| +++.=.+.... .+. ....+ ++ =..+..++|||+|.+.++ .+|.+.-.+..+... -
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 3456666666 65555444432 121 11222 22 236779999999886666 677776666544111 1
Q ss_pred EEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCcee------eee-eCCCCCeEEEEEcCCCcEEEEEe
Q 010669 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANV------AKF-DGHVGAVTAISFSENGYYLATAA 418 (504)
Q Consensus 346 ~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~------~~~-~~~~~~i~~l~~s~~g~~l~s~~ 418 (504)
..+-.. +- ....++.|+|+|.+.++ .||.|+-++-.+...- ..+ ..-=..+..|.|.|+|.+.++.
T Consensus 80 t~IG~~---Gw-~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~- 152 (236)
T 1tl2_A 80 KKIGNG---GW-NQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH- 152 (236)
T ss_dssp EEEECS---CG-GGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-
T ss_pred cEeccc---cc-ccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-
Confidence 111110 11 12578999999998888 5698887775332111 111 1111367999999999988777
Q ss_pred CCcEEEEEcCCCcc-----eeeeecCCCCCCeeEEEECCCCCEEEEEeCcEEEEEeec
Q 010669 419 HDGVKLWDLRKLKN-----FRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVAS 471 (504)
Q Consensus 419 ~d~v~vwd~~~~~~-----~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~di~vw~~~~ 471 (504)
++.++-+....... .........-.....+.|+++|.+.++. +.++|....
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~ 208 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYP 208 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEEEESC
T ss_pred CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEEecCC
Confidence 33354333222111 0111111112234557799999888777 667887633
No 398
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.52 E-value=0.0029 Score=45.83 Aligned_cols=47 Identities=15% Similarity=0.285 Sum_probs=39.3
Q ss_pred ccccCCCCC--CCceEeCCCC-----eeeeHHHHHHHHHhcC--CCCCCCCCCCCCc
Q 010669 2 NCSISGEVP--EEPVVSKNSG-----LLFEKRLIERHILDYG--KCPVTGEPLTMDD 49 (504)
Q Consensus 2 ~c~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~ 49 (504)
.|+|+.+-. .+|++.| ++ |.|=+.+|++||..++ +||+++.++..+.
T Consensus 17 ~C~IC~~~~~~~~~l~~p-C~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 17 ICRICHCEGDDESPLITP-CHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp CCSSSCCCCCSSSCEECS-SSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCeEcCccccCCCeeEec-cccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 589987653 6789987 64 9999999999999886 7999999987653
No 399
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.47 E-value=0.31 Score=45.47 Aligned_cols=188 Identities=14% Similarity=0.198 Sum_probs=94.4
Q ss_pred ccCCCEEEEEeC----CC-------cEEEEcCCCCceEEEcccCc--cceeEEEEeeCCCEEEEEeCC-------CcEEE
Q 010669 232 HYSKDVIATGGV----DT-------NAVLFDRPSGQIVTTLSGHS--KKVTSVKFVTEGDLFLTGSAD-------KTVRV 291 (504)
Q Consensus 232 s~~~~~l~sg~~----dg-------~i~vwd~~~~~~~~~~~~h~--~~v~~l~~s~~~~~l~s~s~d-------g~i~i 291 (504)
..++.+++.|+. ++ .+.+||..+.+-.. +.... ..-.+++. -++.+++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEE
Confidence 456788888873 12 17778887664332 21111 11112222 267777777754 34778
Q ss_pred EeCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEE
Q 010669 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL------DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365 (504)
Q Consensus 292 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 365 (504)
||..+. .+..+..+......-..+ . .++..++.|+. -..+.+||+.+..-...-. .........++.+
T Consensus 132 yd~~~~-~W~~~~~~p~~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~ 205 (318)
T 2woz_A 132 YDPVAA-KWSEVKNLPIKVYGHNVI-S-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP---MKTPRSMFGVAIH 205 (318)
T ss_dssp EETTTT-EEEEECCCSSCEESCEEE-E-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE
T ss_pred EeCCCC-CEeECCCCCCcccccEEE-E-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC---CCCCcccceEEEE
Confidence 888763 333332222111111122 2 36677777764 2358999998876443321 1111111222222
Q ss_pred CCCCCEEEEEeCC-----CcEEEEEcCCCc--eeeeeeCCCCCeEEEEEcCCCcEEEEEeCC--------------c-EE
Q 010669 366 HPDGLILGTGTSE-----ALVKIWDVKSQA--NVAKFDGHVGAVTAISFSENGYYLATAAHD--------------G-VK 423 (504)
Q Consensus 366 ~pdg~~l~~g~~d-----g~I~iwd~~~~~--~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d--------------~-v~ 423 (504)
++.+++.|+.+ ..+.+||+.+.+ .+..+.........+.+ ++.+++.|+.+ . +.
T Consensus 206 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 206 --KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp --TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEE
T ss_pred --CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEE
Confidence 56778887654 357789987653 22222211122222333 56777776532 2 77
Q ss_pred EEEcCCCc
Q 010669 424 LWDLRKLK 431 (504)
Q Consensus 424 vwd~~~~~ 431 (504)
+||+.+.+
T Consensus 282 ~yd~~~~~ 289 (318)
T 2woz_A 282 KYEDDKKE 289 (318)
T ss_dssp EEETTTTE
T ss_pred EEeCCCCE
Confidence 78877644
No 400
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.41 E-value=0.61 Score=43.35 Aligned_cols=201 Identities=8% Similarity=0.044 Sum_probs=119.7
Q ss_pred CCeEEEEeccCCCEEEEEeCCCcEEEEcCCC-CceEEEcccCc----cceeEEEEeeCCCEEEEEe-------CCCcEEE
Q 010669 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPS-GQIVTTLSGHS----KKVTSVKFVTEGDLFLTGS-------ADKTVRV 291 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~----~~v~~l~~s~~~~~l~s~s-------~dg~i~i 291 (504)
..|..=.|-.+ +.|+-.+ +..|+-|++.. ..+.+.+..|. ..|..-..+++.++++..| -.|.+.+
T Consensus 107 e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 184 (365)
T 2xzh_A 107 DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 184 (365)
T ss_dssp SCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEE
Confidence 35555555533 3444443 45799999864 35555555443 4566666677888765443 2478899
Q ss_pred EeCCCCCCcceeEEeccCCcCeEEEEEccC---CCEEEEEeC---CCeEEEEECCCC---e-----EEEEeecCCCCCCC
Q 010669 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHAT---NKYFVTASL---DNTWCFYDLSSG---I-----CLTQVSDAGTDGRP 357 (504)
Q Consensus 292 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~---~~~l~s~s~---dg~i~iwd~~~~---~-----~~~~~~~~~~~~~~ 357 (504)
|..+. ...+.+.+|...-..+.+.-+ .+.|+.+.. .+.+++.++... . ....+... .+...
T Consensus 185 YS~er----~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fp-pea~~ 259 (365)
T 2xzh_A 185 YSVDR----KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP-PEAQN 259 (365)
T ss_dssp EETTT----TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCC-TTCTT
T ss_pred Eeecc----cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCC-ccccC
Confidence 99887 566777888654443333211 123443333 258889888543 1 11111111 22334
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCc
Q 010669 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~ 431 (504)
+-..++..++.-..+..-+.-|.|++||+.++.++..-+-....|..-+.+.+..-++.....| |.-..+....
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 5566788888777888889999999999999999887765556666555544433333334555 5444454433
No 401
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.37 E-value=0.7 Score=43.69 Aligned_cols=229 Identities=10% Similarity=0.098 Sum_probs=119.7
Q ss_pred CccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEe----ccCCcCeEEEEEccC---CCEEEEE---eCCCe
Q 010669 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTL----KDHTAEVQAVTVHAT---NKYFVTA---SLDNT 333 (504)
Q Consensus 264 h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~----~~h~~~v~~l~~~p~---~~~l~s~---s~dg~ 333 (504)
.-...+.++|.|+|.++++--..|.|++++...+. ...+..+ .........|+++|+ +..|+.. ..++.
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~-~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR-KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc-EeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 34457899999999977766558999999765432 1222222 123456899999995 3444332 24556
Q ss_pred EEEEECCCC----------eEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeC-------------CCcEEEEEcCCC-
Q 010669 334 WCFYDLSSG----------ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS-------------EALVKIWDVKSQ- 389 (504)
Q Consensus 334 i~iwd~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~-------------dg~I~iwd~~~~- 389 (504)
|.-|.+..+ +.+..-... ........+.|.|||.++++.+. .|.|.-++....
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~---~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPK---GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECC---CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCC---CCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 766766542 111111111 11224567999999987777442 345555554321
Q ss_pred ---c---eeeee-eCCCCCeEEEEEcCCCcEEEEEeC-Cc-EEEEEcCCCcce------------------eeeecCCCC
Q 010669 390 ---A---NVAKF-DGHVGAVTAISFSENGYYLATAAH-DG-VKLWDLRKLKNF------------------RSFESSDSE 442 (504)
Q Consensus 390 ---~---~~~~~-~~~~~~i~~l~~s~~g~~l~s~~~-d~-v~vwd~~~~~~~------------------~~~~~~~~~ 442 (504)
. ....+ .+|. ....++|+|+|.++++-.. ++ =.|.-+..+... ..+.. +.
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~--~~ 262 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST--DE 262 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT--TT
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC--CC
Confidence 0 01112 2444 4568999998876665432 22 223223333221 11110 01
Q ss_pred CCeeEEEECCCCCEEEEEeCcEEEE--EeeccCccceeEEEccCCCCCCceeEEEEeecCcc
Q 010669 443 TPTNSVDFDHSGSYLAVASADIRVY--QVASVKADWNCIKTFPDLSGTGAASFLFLFVLGQT 502 (504)
Q Consensus 443 ~~v~~i~~~~~g~~l~~~~~di~vw--~~~~~~~~~~~i~~~~~h~~~~~v~~l~~~~~g~~ 502 (504)
.....++|. +|..+...-..-+|| .+.......+...-+.+. .+.+..+.+.|+|.+
T Consensus 263 ~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~--~gR~~dv~~~pDG~l 321 (347)
T 3das_A 263 ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGE--YGRLRTVAPAGGDKL 321 (347)
T ss_dssp CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTT--SSCEEEEEEEETTEE
T ss_pred CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCC--CCCccEEEECCCCcE
Confidence 245667776 344444333333344 442211112223334442 578999999999965
No 402
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.33 E-value=0.11 Score=45.39 Aligned_cols=144 Identities=9% Similarity=0.107 Sum_probs=83.5
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceE------EEc-c-cCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIV------TTL-S-GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~------~~~-~-~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~ 296 (504)
.+..++|+|+|.+.++ .+|.++-.+..+.... ..+ . +-.. ..++.|.++|.+.++ .||.|.-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5669999999997777 6787777776542211 111 0 1111 478899999987766 569888777643
Q ss_pred CC--Cccee-EEe-ccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeE------EEEeecCCCCCCCCCeEEEEEC
Q 010669 297 DG--NYDCK-HTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC------LTQVSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 297 ~~--~~~~~-~~~-~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~v~~~~~~ 366 (504)
.+ .+.-. ..+ ..-=..+..|.+.|+|.+.++. |+.++-+..-++.. ...+.. ..-...+.+.|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~----~g~~~yr~l~f~ 190 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQ----GGWDTFKFLFFS 190 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEES----SSGGGEEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceecc----CCcceEEEEEEC
Confidence 22 11111 111 1112467999999999988777 77754332221110 011100 112245567799
Q ss_pred CCCCEEEEEeCCCcE
Q 010669 367 PDGLILGTGTSEALV 381 (504)
Q Consensus 367 pdg~~l~~g~~dg~I 381 (504)
++|.++++. +|.+
T Consensus 191 ~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 191 SVGTLFGVQ--GGKF 203 (236)
T ss_dssp TTSCEEEEE--TTEE
T ss_pred CCCcEEEEe--CCeE
Confidence 999888776 6643
No 403
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.31 E-value=0.68 Score=42.92 Aligned_cols=176 Identities=10% Similarity=0.066 Sum_probs=99.8
Q ss_pred EEeccCCCEEEEEeCC--------------CcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEe--CCCcEEEE
Q 010669 229 LDIHYSKDVIATGGVD--------------TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS--ADKTVRVW 292 (504)
Q Consensus 229 ~~~s~~~~~l~sg~~d--------------g~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s--~dg~i~iw 292 (504)
--++++|++|+-.... ..|+..++..++... +... .+..|++++++|+-.. .++.-.||
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD----PCIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS----CEEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC----CccEEEEeCCEEEEEeecCCCCceEE
Confidence 4467888877766543 356666776554322 2211 1236788888887665 34445555
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCE
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL-DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~ 371 (504)
.+...+ .....+..+.. ..++++++.|+..+. ...|...++..+.....+. + .. ...++|++.+
T Consensus 133 ~~~~dG--s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-----~---~~-~~~~~P~g~~ 197 (302)
T 3s25_A 133 RIRIDG--EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-----C---NC-YKPVVLDDTN 197 (302)
T ss_dssp EEETTS--CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-----S---CE-EEEEEEETTE
T ss_pred EEECCC--CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-----C---Cc-cceeeecCCE
Confidence 444332 22233333322 456778888887765 6788898988776543332 1 12 2345688887
Q ss_pred EEEEeCC--CcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC--c-EEEEEcCC
Q 010669 372 LGTGTSE--ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD--G-VKLWDLRK 429 (504)
Q Consensus 372 l~~g~~d--g~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d--~-v~vwd~~~ 429 (504)
|+-...+ ..|..-++.... ...+.. ..+ ..|+|+|.+|+.+... . |..-++..
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 7765543 356666665433 333321 233 3477888888776433 3 66667654
No 404
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.22 E-value=0.22 Score=55.45 Aligned_cols=198 Identities=13% Similarity=0.171 Sum_probs=114.9
Q ss_pred EEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeEEecc
Q 010669 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD 308 (504)
Q Consensus 229 ~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 308 (504)
.-.+|..+.+|.-. ..++.|||+.+...+..+.- ...|.-=.|-.+..+ +..+ +..|.-|++.+.. .+...+.-
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l-~lVT-~~aVyHW~~~~~s--~P~k~fdR 144 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTV-ALVT-DNAVYHWSMEGES--QPVKMFDR 144 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCee-EEEc-CCeEEEeccCCCC--ccHHHHhc
Confidence 33567677666654 67899999998877776664 345666666544443 3222 3479999996532 34444433
Q ss_pred C----CcCeEEEEEccCCCEEEEEe-------CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECC---CCCEEEE
Q 010669 309 H----TAEVQAVTVHATNKYFVTAS-------LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP---DGLILGT 374 (504)
Q Consensus 309 h----~~~v~~l~~~p~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---dg~~l~~ 374 (504)
| ...|..-..+++.++++..| -.|.+.+|.++.+... .+ .||......+.... ...+++.
T Consensus 145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~i-----egha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PI-----EGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hh-----hHhHhhhheeccCCCCCCceEEEE
Confidence 3 45677777888888776544 2477888888765321 11 12222222222211 1122222
Q ss_pred EeC---CCcEEEEEcCCC---ceee------eeeC---CCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCCcceeeeec
Q 010669 375 GTS---EALVKIWDVKSQ---ANVA------KFDG---HVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438 (504)
Q Consensus 375 g~~---dg~I~iwd~~~~---~~~~------~~~~---~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~~~~~ 438 (504)
+.. .+.++|.++... .+.. .+.. -..-..++..++.-..+..-+..| |.+||+.++.++..-..
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccc
Confidence 221 268888888542 1111 1111 123445677777666777777888 99999999988765544
No 405
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.15 E-value=0.72 Score=45.59 Aligned_cols=109 Identities=12% Similarity=0.130 Sum_probs=63.3
Q ss_pred cCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCC---CCCCCeEEEEECCC---CCEEEEEeC-------
Q 010669 311 AEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD---GRPEGYTSAAFHPD---GLILGTGTS------- 377 (504)
Q Consensus 311 ~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~v~~~~~~pd---g~~l~~g~~------- 377 (504)
...+.|+|.|+|+++++-...+.|.+++..++............ ........++|+|+ +..|.+...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45689999999987666544457988887655443222111110 12456789999995 444444332
Q ss_pred ------CCcEEEEEcCCC-------ceeee-eeC-CCCCeEEEEEcCCCcEEEEEeC
Q 010669 378 ------EALVKIWDVKSQ-------ANVAK-FDG-HVGAVTAISFSENGYYLATAAH 419 (504)
Q Consensus 378 ------dg~I~iwd~~~~-------~~~~~-~~~-~~~~i~~l~~s~~g~~l~s~~~ 419 (504)
...|.-|++... +.+.. +.. .......|+|.|||.+.++.++
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555655322 11211 221 1235789999999987777553
No 406
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.08 E-value=0.0065 Score=56.98 Aligned_cols=52 Identities=23% Similarity=0.362 Sum_probs=47.5
Q ss_pred CccccCCCCCCCceEeCCCCee--eeHHHHHHHHHhcCC--CCCCCCCCCCCcccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLL--FEKRLIERHILDYGK--CPVTGEPLTMDDIVP 52 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~~ 52 (504)
+.|+||+..++.||=+..|.|. |+...+.++.++.++ ||+|++.+..+||+-
T Consensus 250 L~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~dL~I 305 (371)
T 3i2d_A 250 LQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAI 305 (371)
T ss_dssp SBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGGEEE
T ss_pred ecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHHeeE
Confidence 4799999999999999999997 999999999988875 999999999999953
No 407
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=95.95 E-value=0.0033 Score=45.47 Aligned_cols=41 Identities=15% Similarity=0.209 Sum_probs=37.0
Q ss_pred ccccCCCCCCCceEeCCCCee-eeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLL-FEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|.|+.+.+.+||+.| +||. |++.++.++ .+||+++.++..
T Consensus 20 ~C~IC~~~~~~~v~~p-CgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 20 LCMVCCEEEINSTFCP-CGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp BCTTTSSSBCCEEEET-TCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred EeEEeCcccCcEEEEC-CCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 6999999999999997 9999 999999876 389999998775
No 408
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.87 E-value=0.013 Score=41.43 Aligned_cols=45 Identities=11% Similarity=0.244 Sum_probs=39.7
Q ss_pred ccccCCCCCCCceEeCCCCeeeeHHHHHHHHHhc--CCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLLFEKRLIERHILDY--GKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~ 46 (504)
.|+|+-++...-...+.+||.|=+.+|.+||+.+ .+||.++.+..
T Consensus 17 ~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 17 ICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp BCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred cCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 5999999987667777899999999999999988 68999998776
No 409
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.84 E-value=0.029 Score=53.05 Aligned_cols=196 Identities=12% Similarity=0.137 Sum_probs=102.2
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceEEEcccC-ccceeEEEEe--e-CCCEEEEE-eCCCcEEEEeCCCCCCcceeEEecc-
Q 010669 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGH-SKKVTSVKFV--T-EGDLFLTG-SADKTVRVWQGSEDGNYDCKHTLKD- 308 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~l~~s--~-~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~- 308 (504)
+.++++++.||.|+-+|..+|+...+++.. ..++....-. + ++..++.. +.||.|..++..++ ..+.......
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG-LQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE-EEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC-cEEeeeccccc
Confidence 347888999999999999999998888754 1222221100 1 22333333 58999999998764 1111111111
Q ss_pred -CCcCeEE---EEE-----ccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCC--CCeEEEEEC-----CCCCEE
Q 010669 309 -HTAEVQA---VTV-----HATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP--EGYTSAAFH-----PDGLIL 372 (504)
Q Consensus 309 -h~~~v~~---l~~-----~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~-----pdg~~l 372 (504)
...++.. ... ...+..+++|+.+|.+.-.|+.+|+.+..+......++- ....|.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1122221 000 014568899999999999999999999888643211100 001111111 123567
Q ss_pred EEEeCCCcEEEEEcCCCceeeeee-----CCCCC--e-EEEEEcCCCcEEEEEeCCc-EEEEEcCCCccee
Q 010669 373 GTGTSEALVKIWDVKSQANVAKFD-----GHVGA--V-TAISFSENGYYLATAAHDG-VKLWDLRKLKNFR 434 (504)
Q Consensus 373 ~~g~~dg~I~iwd~~~~~~~~~~~-----~~~~~--i-~~l~~s~~g~~l~s~~~d~-v~vwd~~~~~~~~ 434 (504)
+.|..+..+.+.+ ++++ +-.+. ..... + .+-.++.++.+++ ++.|+ |..+|..++..+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-ECCCCEEEEEECCCCcEEE
Confidence 7777777777766 4453 21111 10000 0 0000112355544 45555 7777777776543
No 410
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.71 E-value=1.3 Score=41.03 Aligned_cols=205 Identities=7% Similarity=0.036 Sum_probs=111.4
Q ss_pred cCCCEEEEEe--CCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCC--------------CcEEEEeCCC
Q 010669 233 YSKDVIATGG--VDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD--------------KTVRVWQGSE 296 (504)
Q Consensus 233 ~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~d--------------g~i~iwd~~~ 296 (504)
.++..|.... .++.|+..+..... ...+... .+--+++++.+|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4566665543 35666666654333 3333321 123457888887766543 3566666655
Q ss_pred CCCcceeEEeccCCcCeEEEEEccCCCEEEEEe----CCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEE
Q 010669 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS----LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372 (504)
Q Consensus 297 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l 372 (504)
.. ...+.. .. +..|+++++.|+... .+..|...++..... ..+... .+ ..++++++.|
T Consensus 98 ~~----~~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~-------~~--~~~~~~g~~i 159 (302)
T 3s25_A 98 HG----STVLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNH-------YL--FTCNTSDRYF 159 (302)
T ss_dssp CC----CEEEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESS-------CC--CCSEEETTEE
T ss_pred Cc----ceEeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCC-------Cc--eEeeEECCEE
Confidence 31 122221 11 236677888888776 344566677765443 333211 11 3456777777
Q ss_pred EEEeC-CCcEEEEEcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCC-c--EEEEEcCCCcceeeeecCCCCCCeeEE
Q 010669 373 GTGTS-EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G--VKLWDLRKLKNFRSFESSDSETPTNSV 448 (504)
Q Consensus 373 ~~g~~-dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d-~--v~vwd~~~~~~~~~~~~~~~~~~v~~i 448 (504)
+-.+. ...|.+.++..+.....+.+ ... ..+.|++.+|+-...+ + |..-++.... ...+.. ..+ .
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~----~~~--~ 228 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE----ANI--E 228 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC----SCE--E
T ss_pred EEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC----CCc--c
Confidence 65544 67888888766544333332 222 3456888888776544 2 6666666544 233321 223 3
Q ss_pred EECCCCCEEEEEeCc--EEEEEeec
Q 010669 449 DFDHSGSYLAVASAD--IRVYQVAS 471 (504)
Q Consensus 449 ~~~~~g~~l~~~~~d--i~vw~~~~ 471 (504)
.|+|++.+|+.+... -.|+.+..
T Consensus 229 ~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 229 HYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEEEETTEEEEEECSSSCEEEEEET
T ss_pred eEEECCCEEEEEECCCCcEEEEEEC
Confidence 478888888876432 55665543
No 411
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.67 E-value=2 Score=42.93 Aligned_cols=235 Identities=10% Similarity=0.166 Sum_probs=127.2
Q ss_pred CCCCCeEEEEeccCCCEEEEEe-CCCcEEEEcCCCCceEEEcc-cCccceeEEEEe--eCCCEEEEEeC-------CCcE
Q 010669 221 TSKPGIVSLDIHYSKDVIATGG-VDTNAVLFDRPSGQIVTTLS-GHSKKVTSVKFV--TEGDLFLTGSA-------DKTV 289 (504)
Q Consensus 221 ~~~~~I~~~~~s~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~s--~~~~~l~s~s~-------dg~i 289 (504)
.|...+.--.=..||++|+.-. .+..|-..++...++-..+. .....+..+.|- |+..+++.++. ||..
T Consensus 128 ~HHp~~S~tdg~yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~ 207 (638)
T 3sbq_A 128 CHHPHISMTDGKYDGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV 207 (638)
T ss_dssp CCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC
T ss_pred cCCCcccccCCeeeeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc
Confidence 3433333333335788888776 46678888888877655554 245668888886 67778887764 3331
Q ss_pred EEEeCCCCCCcceeEEeccCC----------cCeEEEEEccCCCEEEEEeCCC---------------eEEEEECC----
Q 010669 290 RVWQGSEDGNYDCKHTLKDHT----------AEVQAVTVHATNKYFVTASLDN---------------TWCFYDLS---- 340 (504)
Q Consensus 290 ~iwd~~~~~~~~~~~~~~~h~----------~~v~~l~~~p~~~~l~s~s~dg---------------~i~iwd~~---- 340 (504)
..++....+.....+.+.+ +....+...+++.+.++.+.+. .+.++++.
T Consensus 208 --~~~~~~~~y~~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~ 285 (638)
T 3sbq_A 208 --FDLQDENSYTMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEA 285 (638)
T ss_dssp --CCTTSTTEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHH
T ss_pred --cccCChhhceEEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHH
Confidence 1111111111111111111 1122233456677777665421 24444431
Q ss_pred ---CCe-------EEEEeecCC----CC------CCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCce--------
Q 010669 341 ---SGI-------CLTQVSDAG----TD------GRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKSQAN-------- 391 (504)
Q Consensus 341 ---~~~-------~~~~~~~~~----~~------~~~~~v~~~~~~pdg~~l~~g~-~dg~I~iwd~~~~~~-------- 391 (504)
.|+ -+..+.... .. .-......+.++|||+++++++ .+.++.++|++....
T Consensus 286 ~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~ 365 (638)
T 3sbq_A 286 AVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLAD 365 (638)
T ss_dssp HHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSC
T ss_pred HHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccC
Confidence 010 011111000 00 0113456789999999888765 578999999874211
Q ss_pred -----eeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCC----------cceeeeecCCCCCCeeEEEE-----
Q 010669 392 -----VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL----------KNFRSFESSDSETPTNSVDF----- 450 (504)
Q Consensus 392 -----~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~----------~~~~~~~~~~~~~~v~~i~~----- 450 (504)
..... -.-.....+|.++|.-..+.--|+ |.-|++.+. ..+..+..+ ..+-.+.-
T Consensus 366 ~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~---YqpGH~~~~~get 441 (638)
T 3sbq_A 366 PRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVH---YQPGHLHASLCET 441 (638)
T ss_dssp GGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECS---SCEEEEEETTTTS
T ss_pred cccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccc---cCCcccccCCCcc
Confidence 11222 223567889999996555666777 999998753 234444443 22333333
Q ss_pred -CCCCCEEEEEe
Q 010669 451 -DHSGSYLAVAS 461 (504)
Q Consensus 451 -~~~g~~l~~~~ 461 (504)
.++|++|++..
T Consensus 442 ~~~dGk~lv~ln 453 (638)
T 3sbq_A 442 NEADGKWLVALS 453 (638)
T ss_dssp TTCCSCEEEEEE
T ss_pred CCCCccEEEEec
Confidence 57899999874
No 412
>2kkx_A Uncharacterized protein ECS2156; methods development, U-box domain, structural genomics, PSI- protein structure initiative; NMR {Escherichia coli} PDB: 2kky_A
Probab=95.61 E-value=0.016 Score=42.37 Aligned_cols=53 Identities=34% Similarity=0.466 Sum_probs=46.1
Q ss_pred CccccCCCCCCCceEeCCCC-----eeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPEEPVVSKNSG-----LLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
+.|+|+-+.|++-|.-+-++ ..|.+..+.+.+.+++.-|.|+||++..-+|..
T Consensus 28 l~CPITL~~PE~GVFvkNs~~S~VCsLyD~~Al~~Lv~~~~~HPLSREpit~sMIv~~ 85 (102)
T 2kkx_A 28 IQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITASIIVKH 85 (102)
T ss_dssp GCBTTTTBCCSEEEEEEETTTTSEEEEEEHHHHHHHHHHTCCCTTTCCCCCTTTEECT
T ss_pred cCCCeEEeeCCcceEEecCCCCccceecCHHHHHHHHhcCCCCCCccCCCCHhhEech
Confidence 35999999999999864443 479999999999999999999999999888765
No 413
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=95.59 E-value=0.015 Score=54.46 Aligned_cols=51 Identities=16% Similarity=0.288 Sum_probs=47.1
Q ss_pred CccccCCCCCCCceEeCCCCee--eeHHHHHHHHHhcCC--CCCCCCCCCCCccc
Q 010669 1 MNCSISGEVPEEPVVSKNSGLL--FEKRLIERHILDYGK--CPVTGEPLTMDDIV 51 (504)
Q Consensus 1 ~~c~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~ 51 (504)
+.|+||+..++.|+=+..|.|. |+...+.++.++.++ ||+|++.+..+||+
T Consensus 216 L~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~dL~ 270 (360)
T 4fo9_A 216 LMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLI 270 (360)
T ss_dssp SBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGGGEE
T ss_pred eeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHHHeE
Confidence 4699999999999999999997 999999999998875 99999999999995
No 414
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.53 E-value=0.011 Score=41.28 Aligned_cols=41 Identities=10% Similarity=0.221 Sum_probs=36.5
Q ss_pred ccccCCCCCCCceEeCCCCee-eeHHHHHHHHHhcCCCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGLL-FEKRLIERHILDYGKCPVTGEPLTM 47 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~ 47 (504)
.|.|+.+.+.++|+.| +||. |.+.++.+ ..+||+++.++..
T Consensus 17 ~C~IC~~~~~~~v~~p-CgH~~~C~~C~~~----~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 17 DCVVCQNGTVNWVLLP-CRHTCLCDGCVKY----FQQCPMCRQFVQE 58 (68)
T ss_dssp CCSSSSSSCCCCEETT-TTBCCSCTTHHHH----CSSCTTTCCCCCC
T ss_pred CCCCcCcCCCCEEEEC-CCChhhhHHHHhc----CCCCCCCCcchhc
Confidence 5999999999999998 9999 99999984 5789999987764
No 415
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.28 E-value=2.2 Score=40.81 Aligned_cols=192 Identities=11% Similarity=0.102 Sum_probs=109.7
Q ss_pred CCeEEEEeccCCCEEE--EEeC-------------CCcEEEEcCCCC--ceEEEccc------CccceeEEEEe---eC-
Q 010669 224 PGIVSLDIHYSKDVIA--TGGV-------------DTNAVLFDRPSG--QIVTTLSG------HSKKVTSVKFV---TE- 276 (504)
Q Consensus 224 ~~I~~~~~s~~~~~l~--sg~~-------------dg~i~vwd~~~~--~~~~~~~~------h~~~v~~l~~s---~~- 276 (504)
-.|..+...+.+++=+ +|-. -..|.+||+.++ +.++++.- ....+..+.+. ++
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3577888877666322 2211 125889999999 88887753 23457888887 22
Q ss_pred ---CCEEEEE-eCCCcEEEEeCCCCCCcceeEE-----------eccC----CcCeEEEEEccC----CCEEEEEeCCC-
Q 010669 277 ---GDLFLTG-SADKTVRVWQGSEDGNYDCKHT-----------LKDH----TAEVQAVTVHAT----NKYFVTASLDN- 332 (504)
Q Consensus 277 ---~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~-----------~~~h----~~~v~~l~~~p~----~~~l~s~s~dg- 332 (504)
+.+++.+ +..+-|.|+|+.++..++..+. +.+. ...|..|+++|+ ++.|.-....+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 3344444 3567899999988654433211 1111 236788888887 56666555444
Q ss_pred eEEEEE---CCCC---eEEEEeecCCCCCCCCCeEEEEEC-CCCCEEEEEeCCCcEEEEEcCC-C---ceeeeee--CCC
Q 010669 333 TWCFYD---LSSG---ICLTQVSDAGTDGRPEGYTSAAFH-PDGLILGTGTSEALVKIWDVKS-Q---ANVAKFD--GHV 399 (504)
Q Consensus 333 ~i~iwd---~~~~---~~~~~~~~~~~~~~~~~v~~~~~~-pdg~~l~~g~~dg~I~iwd~~~-~---~~~~~~~--~~~ 399 (504)
.+.-.. ++.. ..+..+. ..+....-..+++. .+|.++++--..+.|..|+... . .....+. ..-
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G---~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l 323 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLG---NRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRF 323 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEE---ECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTC
T ss_pred cEEEEEHHHhhCcchhhceEEee---ecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCc
Confidence 222222 1111 1112221 11112334456776 6888888888889999999875 1 1222221 122
Q ss_pred CCeEEEEEcCCCcEEEEEe
Q 010669 400 GAVTAISFSENGYYLATAA 418 (504)
Q Consensus 400 ~~i~~l~~s~~g~~l~s~~ 418 (504)
..+..+.+..+|.+.+..+
T Consensus 324 ~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 324 VFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CSEEEEEECTTSCEEEEEC
T ss_pred cccCeEEECCCCeEEEEEC
Confidence 3577888877776555543
No 416
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.18 E-value=2.7 Score=41.46 Aligned_cols=237 Identities=9% Similarity=0.062 Sum_probs=120.9
Q ss_pred eEEEEeccCCC-EEEEEeCCCcEEEEcCCCC---ceEEEcc---------cCccceeEEEEeeC----CCEEEEEeC--C
Q 010669 226 IVSLDIHYSKD-VIATGGVDTNAVLFDRPSG---QIVTTLS---------GHSKKVTSVKFVTE----GDLFLTGSA--D 286 (504)
Q Consensus 226 I~~~~~s~~~~-~l~sg~~dg~i~vwd~~~~---~~~~~~~---------~h~~~v~~l~~s~~----~~~l~s~s~--d 286 (504)
-+.|+|.|+|. .|+++...|.|++++.... ..+..+. ........|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 57899999996 4555678899999975422 1222221 11356789999985 443333221 1
Q ss_pred ----------CcEEEEeCCCC--C-----CcceeEEec--cCCcCeEEEEEccCCCEEEEEeCCC---------------
Q 010669 287 ----------KTVRVWQGSED--G-----NYDCKHTLK--DHTAEVQAVTVHATNKYFVTASLDN--------------- 332 (504)
Q Consensus 287 ----------g~i~iwd~~~~--~-----~~~~~~~~~--~h~~~v~~l~~~p~~~~l~s~s~dg--------------- 332 (504)
..|.-|.+..+ . ..+.+..+. ........|.|.|||.++++.+..+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~ 175 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDF 175 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCC
Confidence 13434555421 1 112222222 1122357899999998777766533
Q ss_pred --eEEEEECCCCe---------------------EEEEeecCCCCCCCCCeEEEEECCC-----CC-EEEEEeCCC----
Q 010669 333 --TWCFYDLSSGI---------------------CLTQVSDAGTDGRPEGYTSAAFHPD-----GL-ILGTGTSEA---- 379 (504)
Q Consensus 333 --~i~iwd~~~~~---------------------~~~~~~~~~~~~~~~~v~~~~~~pd-----g~-~l~~g~~dg---- 379 (504)
.|.-.|.+... .+... ++. ....++|+|. |. ++..+...|
T Consensus 176 ~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~------G~R-Np~gla~dp~tg~~~G~l~~~~~D~~G~~~~ 248 (463)
T 2wg3_C 176 TGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAH------GLH-DPGRCAVDRHPTDININLTILCSDSNGKNRS 248 (463)
T ss_dssp TTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEE------CCS-SCCBEEEESSCSSTTCSEEEEEECC------
T ss_pred CeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEE------CCC-CcceEEECCCCCCcccceEEEecccCCCCCC
Confidence 23333333210 00000 111 2457899996 44 344433212
Q ss_pred cEEEEEcCCC------ceeeeeeCCC-CCeEEEEEcCC-------CcEEEEEeCCc-EEEEEcCCCcce---eee-ec--
Q 010669 380 LVKIWDVKSQ------ANVAKFDGHV-GAVTAISFSEN-------GYYLATAAHDG-VKLWDLRKLKNF---RSF-ES-- 438 (504)
Q Consensus 380 ~I~iwd~~~~------~~~~~~~~~~-~~i~~l~~s~~-------g~~l~s~~~d~-v~vwd~~~~~~~---~~~-~~-- 438 (504)
.-.|..+..+ .++..+..|. .+++.+.|... |.+|+..- .+ |....+...... ..+ ..
T Consensus 249 ~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~-~g~i~~~~~~~~~~~~~~~~~~~g~~ 327 (463)
T 2wg3_C 249 SARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDR-NGNFLTLQQSPVTKQWQEKPLCLGTS 327 (463)
T ss_dssp CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEET-TSCEEEEEC-----CCEEEEECEEET
T ss_pred CCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecC-CCcEEEEEeCCCCceeeEEEeecCCc
Confidence 1234444333 2455554332 47888888542 34555433 35 655555433211 111 00
Q ss_pred ----CCCCCCeeEEEECCCCCEEEEEe-------CcEEEEEee
Q 010669 439 ----SDSETPTNSVDFDHSGSYLAVAS-------ADIRVYQVA 470 (504)
Q Consensus 439 ----~~~~~~v~~i~~~~~g~~l~~~~-------~di~vw~~~ 470 (504)
......+..+.+.|+|.++++.. .+.+||.+.
T Consensus 328 ~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 328 GSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp TSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred ccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 11135789999999999888776 348999985
No 417
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.97 E-value=3.4 Score=41.38 Aligned_cols=240 Identities=11% Similarity=0.148 Sum_probs=134.4
Q ss_pred EEEEEeCCCcEEEEcCCCCceEEEcccC-------------------------cccee--EEEEe---eCCCEEEEEe-C
Q 010669 237 VIATGGVDTNAVLFDRPSGQIVTTLSGH-------------------------SKKVT--SVKFV---TEGDLFLTGS-A 285 (504)
Q Consensus 237 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------------------------~~~v~--~l~~s---~~~~~l~s~s-~ 285 (504)
.+.+|+..|.|+|+-+.+++.+..+.-. .+... .+.+. -||++|+.-. .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 3678889999999999998887765311 11111 23332 2667777765 4
Q ss_pred CCcEEEEeCCCCCCcceeEEec-cCCcCeEEEEEc--cCCCEEEEEeC-------CCeE------------EEEECCCCe
Q 010669 286 DKTVRVWQGSEDGNYDCKHTLK-DHTAEVQAVTVH--ATNKYFVTASL-------DNTW------------CFYDLSSGI 343 (504)
Q Consensus 286 dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~~--p~~~~l~s~s~-------dg~i------------~iwd~~~~~ 343 (504)
+..|-..+++.- ++...+. .....+.++.|. |+..|++.++. ||.. ...|..+.+
T Consensus 152 n~RvAri~l~~~---~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~ 228 (638)
T 3sbq_A 152 NSRVARIRLDIM---KCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETME 228 (638)
T ss_dssp TTEEEEEETTTT---EEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCS
T ss_pred CcceEEEECCcE---eeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccE
Confidence 555666666553 3433332 345678888886 67778888764 3331 112333332
Q ss_pred EEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCC---------------cEEEEEc----------------------
Q 010669 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA---------------LVKIWDV---------------------- 386 (504)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg---------------~I~iwd~---------------------- 386 (504)
...++... .....+...++|.+.++.+.+. .+.++|+
T Consensus 229 v~~Qv~v~------gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~V 302 (638)
T 3sbq_A 229 MAFQVIVD------GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPV 302 (638)
T ss_dssp EEEEEEES------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCE
T ss_pred EEEEEEcC------CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeE
Confidence 22222111 1233455567777776654332 3555554
Q ss_pred ---CC----CceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc--EEEEEcCCCcce---------ee-eecCCCCCCeeE
Q 010669 387 ---KS----QANVAKFDGHVGAVTAISFSENGYYLATAAHDG--VKLWDLRKLKNF---------RS-FESSDSETPTNS 447 (504)
Q Consensus 387 ---~~----~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~--v~vwd~~~~~~~---------~~-~~~~~~~~~v~~ 447 (504)
+. +..+..+-.-......+.++|||++++.++.-. +.++|+++.... .. ............
T Consensus 303 iD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlH 382 (638)
T 3sbq_A 303 LDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLH 382 (638)
T ss_dssp EECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEE
T ss_pred EccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccE
Confidence 22 111111111123455688999999999988764 999999853221 00 011112456788
Q ss_pred EEECCCCCEEEEEeCc--EEEEEeecc------CccceeEEEccCC
Q 010669 448 VDFDHSGSYLAVASAD--IRVYQVASV------KADWNCIKTFPDL 485 (504)
Q Consensus 448 i~~~~~g~~l~~~~~d--i~vw~~~~~------~~~~~~i~~~~~h 485 (504)
.+|+++|....+---| |.-|++... .+.+..+..++-|
T Consensus 383 t~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~ 428 (638)
T 3sbq_A 383 TTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVH 428 (638)
T ss_dssp EEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECS
T ss_pred EEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccc
Confidence 9999999433333345 999998542 2234566666665
No 418
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.84 E-value=0.4 Score=50.32 Aligned_cols=154 Identities=9% Similarity=0.108 Sum_probs=82.6
Q ss_pred CCCEEEEEeCCC------cEEEEcCCCCceEEEcccCcc-ceeEEEEeeCCCEEEEEeCCC--cEEEEeCCCCCCcceeE
Q 010669 234 SKDVIATGGVDT------NAVLFDRPSGQIVTTLSGHSK-KVTSVKFVTEGDLFLTGSADK--TVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 234 ~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~h~~-~v~~l~~s~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~ 304 (504)
++.+++.||.++ .+.+||..+.+-...-..... .-.+++...++.+++.||.++ .+.+||..+. .|..+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~-~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE-IFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT-EEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC-ceEEcc
Confidence 677778877543 478888876543221111111 112223223778888887655 6899998773 333332
Q ss_pred E---eccCCcCeEEEEEccC-CCEEEEEeC--C-----CeEEEEECCCCeE-----EEEeecCCCCCCCCCeEEEEECCC
Q 010669 305 T---LKDHTAEVQAVTVHAT-NKYFVTASL--D-----NTWCFYDLSSGIC-----LTQVSDAGTDGRPEGYTSAAFHPD 368 (504)
Q Consensus 305 ~---~~~h~~~v~~l~~~p~-~~~l~s~s~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~pd 368 (504)
. .........++.+..+ +..++.|+. + ..+.+||+.+... ...+..... . ...-.+++...+
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~-~-~R~~~~~~~~~~ 607 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL-F-QRYGSQIKYITP 607 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG-G-CCBSCEEEEEET
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC-C-CcccceEEEeCC
Confidence 2 1111122233445544 667777765 2 3588999988761 222211000 0 111123333344
Q ss_pred CCEEEEEeC--------CCcEEEEEcCCCc
Q 010669 369 GLILGTGTS--------EALVKIWDVKSQA 390 (504)
Q Consensus 369 g~~l~~g~~--------dg~I~iwd~~~~~ 390 (504)
+.+++.|+. ...|.+||+.+.+
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 788888874 3468999998764
No 419
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.69 E-value=3.2 Score=39.81 Aligned_cols=263 Identities=9% Similarity=0.042 Sum_probs=128.1
Q ss_pred CCeEEEEecc--CCCEEEEEeCCC----cEEEEcCCCCceEEEccc--------------CccceeEEEEee-C-CCEEE
Q 010669 224 PGIVSLDIHY--SKDVIATGGVDT----NAVLFDRPSGQIVTTLSG--------------HSKKVTSVKFVT-E-GDLFL 281 (504)
Q Consensus 224 ~~I~~~~~s~--~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~--------------h~~~v~~l~~s~-~-~~~l~ 281 (504)
..|.+|+++| .+.+.+ ++..| .|...+ ..++....+.. ....|.++++.| + ...+.
T Consensus 55 ~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLM-AARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEE-EEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEE-EecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 4699999998 444444 44444 344332 23333222221 112577888886 2 45566
Q ss_pred EEeCCCcEEEEeCCCCCCcceeEEecc----------------CCcCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeE
Q 010669 282 TGSADKTVRVWQGSEDGNYDCKHTLKD----------------HTAEVQAVTVHAT-NKYFVTASLDNTWCFYDLSSGIC 344 (504)
Q Consensus 282 s~s~dg~i~iwd~~~~~~~~~~~~~~~----------------h~~~v~~l~~~p~-~~~l~s~s~dg~i~iwd~~~~~~ 344 (504)
.++..+.|...+ +.+..+..+..+.. ....+.+|.++|. ...++.+..++.|...+ +.++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 665555554442 22233333321111 1235789999884 44555555455444432 22333
Q ss_pred EEEeecCCCCC--------CCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCceeeeeeC--CC---CCeEEEEEcC-
Q 010669 345 LTQVSDAGTDG--------RPEGYTSAAFHPD-GLILGTGTSEALVKIWDVKSQANVAKFDG--HV---GAVTAISFSE- 409 (504)
Q Consensus 345 ~~~~~~~~~~~--------~~~~v~~~~~~pd-g~~l~~g~~dg~I~iwd~~~~~~~~~~~~--~~---~~i~~l~~s~- 409 (504)
...+....... ....+.++.++|+ ...+.+++..| |...+- .++....+.. .. ..+.++.++|
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCC
Confidence 33222100000 0134889999995 45666666555 444332 2332222221 11 2456788876
Q ss_pred CCcEEEEEeC-----------Cc-EEEEEcCC-Ccceeeeec--CCCCC----CeeEEEECCC-CCEEEEEeCcEEEEEe
Q 010669 410 NGYYLATAAH-----------DG-VKLWDLRK-LKNFRSFES--SDSET----PTNSVDFDHS-GSYLAVASADIRVYQV 469 (504)
Q Consensus 410 ~g~~l~s~~~-----------d~-v~vwd~~~-~~~~~~~~~--~~~~~----~v~~i~~~~~-g~~l~~~~~di~vw~~ 469 (504)
+...|..+.. ++ ..+|.... ++....+.. ..... ....++++|. ...|++++.+..||.-
T Consensus 289 ~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S 368 (394)
T 3b7f_A 289 DPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS 368 (394)
T ss_dssp CTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE
T ss_pred CCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 3333333321 22 45555444 333333321 11000 1245888875 3556667666667766
Q ss_pred eccCccceeEEEccCCCCCCceeEEEEe
Q 010669 470 ASVKADWNCIKTFPDLSGTGAASFLFLF 497 (504)
Q Consensus 470 ~~~~~~~~~i~~~~~h~~~~~v~~l~~~ 497 (504)
....++|+.+..- -..+.++.|.
T Consensus 369 ~D~G~tW~~~~~~-----lp~~~~v~~~ 391 (394)
T 3b7f_A 369 ADEGEHWQCIASH-----LPHIYAVQSA 391 (394)
T ss_dssp SSTTSBCEEEECS-----CSCEEEEEEE
T ss_pred CCCCCCceEcccC-----CCCeeEEEEe
Confidence 5556778876631 2346777664
No 420
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.27 E-value=1.5 Score=49.09 Aligned_cols=177 Identities=8% Similarity=0.044 Sum_probs=102.9
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCC-CceEEEcccC----ccceeEEEEeeCCCEEEEEe-------CCCcEEEE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPS-GQIVTTLSGH----SKKVTSVKFVTEGDLFLTGS-------ADKTVRVW 292 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h----~~~v~~l~~s~~~~~l~s~s-------~dg~i~iw 292 (504)
+|..=.|-.+. .|+..+ +..|+-|++.. ..+++.+..| ...|..-..+++.++++..| -.|.+.+|
T Consensus 107 ~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 107 DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred CceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 45555555433 333333 45799999864 2444444444 34566677778888766443 35889999
Q ss_pred eCCCCCCcceeEEeccCCcCeEEEEEc--cC-CCEEEEEeC---CCeEEEEECCCC---eEEE-----EeecCCCCCCCC
Q 010669 293 QGSEDGNYDCKHTLKDHTAEVQAVTVH--AT-NKYFVTASL---DNTWCFYDLSSG---ICLT-----QVSDAGTDGRPE 358 (504)
Q Consensus 293 d~~~~~~~~~~~~~~~h~~~v~~l~~~--p~-~~~l~s~s~---dg~i~iwd~~~~---~~~~-----~~~~~~~~~~~~ 358 (504)
.++. ...+.+.||.+....+... +. ...|..+.. .+.++|.++... .... .+... ......
T Consensus 185 S~er----~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~-~~~~~D 259 (1630)
T 1xi4_A 185 SVDR----KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP-PEAQND 259 (1630)
T ss_pred eccc----ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCC-cccccC
Confidence 8876 3445566776554444432 11 123333322 368888888543 1110 01100 112233
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeeeCCCCCeEEEEEc
Q 010669 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~~~~~i~~l~~s 408 (504)
-..++..++.-.++..-+.-|.|++||+.++.++..-+-...+|...+.+
T Consensus 260 fpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred cceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccC
Confidence 45577788877778888899999999999998876655444445444443
No 421
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=94.25 E-value=6.2 Score=41.27 Aligned_cols=231 Identities=8% Similarity=0.037 Sum_probs=119.7
Q ss_pred EEE-eccCCCEEEEE-e----CCCcEEEEcCCCCceEEE-cccCcc--------ceeEEEEeeCCCEEEEE---------
Q 010669 228 SLD-IHYSKDVIATG-G----VDTNAVLFDRPSGQIVTT-LSGHSK--------KVTSVKFVTEGDLFLTG--------- 283 (504)
Q Consensus 228 ~~~-~s~~~~~l~sg-~----~dg~i~vwd~~~~~~~~~-~~~h~~--------~v~~l~~s~~~~~l~s~--------- 283 (504)
.+. ++|++++++.+ | .-..++++|+.+++.+.. +. ... ....++|..++.++++.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 344 88999876654 2 223699999999876531 11 111 11445887444444432
Q ss_pred -eCCCcEEEEeCCCCCCcceeEEeccCCcCe-EEEEEccCCCE-----EEEEeCC---CeEEEEECCC--CeEEEEeecC
Q 010669 284 -SADKTVRVWQGSEDGNYDCKHTLKDHTAEV-QAVTVHATNKY-----FVTASLD---NTWCFYDLSS--GICLTQVSDA 351 (504)
Q Consensus 284 -s~dg~i~iwd~~~~~~~~~~~~~~~h~~~v-~~l~~~p~~~~-----l~s~s~d---g~i~iwd~~~--~~~~~~~~~~ 351 (504)
+.-..|+.|.+-+... .-...+.+....+ .+...++++.+ +++.+.+ ..+.+.|... +. ...+..
T Consensus 212 ~~~~~~v~~~~~Gt~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~- 288 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIE-KAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINM- 288 (711)
T ss_dssp TSSBCEEEEEETTSCGG-GCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCS-
T ss_pred CCCCCEEEEEECCCChH-HCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeec-
Confidence 1224688887765321 2222333322222 33445566652 4444322 3466666653 33 222221
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEE----------eCCCcEEEEEcCCCc-------eeee-eeC-CCCCeEEEEEcCCCc
Q 010669 352 GTDGRPEGYTSAAFHPDGLILGTG----------TSEALVKIWDVKSQA-------NVAK-FDG-HVGAVTAISFSENGY 412 (504)
Q Consensus 352 ~~~~~~~~v~~~~~~pdg~~l~~g----------~~dg~I~iwd~~~~~-------~~~~-~~~-~~~~i~~l~~s~~g~ 412 (504)
... . .+..+.++.+++.. ...+.|...|+.++. .... +.. ....+..+.|..+ .
T Consensus 289 ---~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~ 361 (711)
T 4hvt_A 289 ---PSD--A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-R 361 (711)
T ss_dssp ---CTT--C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-C
T ss_pred ---CCc--c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-E
Confidence 111 1 12334456555532 246789999987642 2222 322 2346788899866 5
Q ss_pred EEEEEeCCc---EEEEEcCCCc-ceee-eecCCCCCCeeEEEECCCCCE-EEEEeCc---EEEEEee
Q 010669 413 YLATAAHDG---VKLWDLRKLK-NFRS-FESSDSETPTNSVDFDHSGSY-LAVASAD---IRVYQVA 470 (504)
Q Consensus 413 ~l~s~~~d~---v~vwd~~~~~-~~~~-~~~~~~~~~v~~i~~~~~g~~-l~~~~~d---i~vw~~~ 470 (504)
++++...++ |.++|+.++. .... +.... .+.+....+++++.. +++.+.. -.+|.++
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d 427 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWV 427 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEe
Confidence 666666664 7888876664 2333 33322 245666677777654 4444433 5555553
No 422
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.13 Score=48.50 Aligned_cols=116 Identities=6% Similarity=0.051 Sum_probs=69.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCCCcceeEEeccC-CcCeEEEEEc--cCCCEEEEE--eCCCeEEEEECCCCeEEEEeecCC
Q 010669 278 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDH-TAEVQAVTVH--ATNKYFVTA--SLDNTWCFYDLSSGICLTQVSDAG 352 (504)
Q Consensus 278 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~l~~~--p~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~ 352 (504)
..++.++.||.|.-+|..++ +..-.+... ..++....-. +.+..++.+ +.||.+..+|..+|.....+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG---HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT---EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCC---cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 46888899999999998775 444444322 1222221100 112234443 689999999998886554443211
Q ss_pred CCCCCCCeEE----EEEC----CCCCEEEEEeCCCcEEEEEcCCCceeeeeeC
Q 010669 353 TDGRPEGYTS----AAFH----PDGLILGTGTSEALVKIWDVKSQANVAKFDG 397 (504)
Q Consensus 353 ~~~~~~~v~~----~~~~----pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~~ 397 (504)
. ....++.. +... ..+..+++|+.+|.+...|+++|+.+..+..
T Consensus 88 l-v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 L-VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp H-HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred c-eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1 00111211 0000 1456788999999999999999999988863
No 423
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=91.88 E-value=0.21 Score=36.91 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=37.3
Q ss_pred ccccCCCCCCC-ceEeCCCCeeeeHHHHHHHHHh-cCCCCCCCCCCC
Q 010669 2 NCSISGEVPEE-PVVSKNSGLLFEKRLIERHILD-YGKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~ 46 (504)
||.+++-+... .-+-| ++|+|+..++..|-++ ..+||.+++++.
T Consensus 3 fC~~C~~Pi~iygRmIP-CkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIP-CKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBCSEEEEEET-TCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCeEEEeeecc-ccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 78999888766 56677 9999999999999865 467999999877
No 424
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.34 E-value=10 Score=36.16 Aligned_cols=240 Identities=11% Similarity=0.023 Sum_probs=116.5
Q ss_pred CEEEEEeCCCcEEEEcCCC-CceEEEc--ccCccceeEEEEee-CCCEEEEEeCCC----cEEEEeCCCCCCcceeEE--
Q 010669 236 DVIATGGVDTNAVLFDRPS-GQIVTTL--SGHSKKVTSVKFVT-EGDLFLTGSADK----TVRVWQGSEDGNYDCKHT-- 305 (504)
Q Consensus 236 ~~l~sg~~dg~i~vwd~~~-~~~~~~~--~~h~~~v~~l~~s~-~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~-- 305 (504)
..|.+|+..| +.+++... +.....+ ......|.+|++.| +...|..++..| .|... .+.+..+..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 4666777777 55555432 2222221 12235699999998 333444454444 34333 222333333221
Q ss_pred -ecc--------CCcCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeEEEEeecC-C-C------------CCCCCCe
Q 010669 306 -LKD--------HTAEVQAVTVHAT--NKYFVTASLDNTWCFYDLSSGICLTQVSDA-G-T------------DGRPEGY 360 (504)
Q Consensus 306 -~~~--------h~~~v~~l~~~p~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~-~------------~~~~~~v 360 (504)
+.. +...|.++++.|. ...+..++..+.|...+ +.++....+... . . ......+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 111 1125778999873 45666666666655543 223322222110 0 0 0112357
Q ss_pred EEEEECC-CCCEEEEEeCCCcEEEEEcCCCceeeeeeC-----C--------CCCeEEEEEcCC-CcEEEEEeCCcEEEE
Q 010669 361 TSAAFHP-DGLILGTGTSEALVKIWDVKSQANVAKFDG-----H--------VGAVTAISFSEN-GYYLATAAHDGVKLW 425 (504)
Q Consensus 361 ~~~~~~p-dg~~l~~g~~dg~I~iwd~~~~~~~~~~~~-----~--------~~~i~~l~~s~~-g~~l~s~~~d~v~vw 425 (504)
.++.++| +...+.++..++.|...+ ..++....+.. + ...+.+|.+.|+ ...|..+..++|...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s 258 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRM 258 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEe
Confidence 8999998 344445554444444332 12222222210 0 124889999985 456666776666655
Q ss_pred EcCCCcceeeeecCCCC---CCeeEEEECCC-CCEEEEEeC-----------c--EEEEEeeccCccceeEE
Q 010669 426 DLRKLKNFRSFESSDSE---TPTNSVDFDHS-GSYLAVASA-----------D--IRVYQVASVKADWNCIK 480 (504)
Q Consensus 426 d~~~~~~~~~~~~~~~~---~~v~~i~~~~~-g~~l~~~~~-----------d--i~vw~~~~~~~~~~~i~ 480 (504)
+- .++....+...... ..+..+.++|. ...|.++.. + ..||.-....++|+.+.
T Consensus 259 ~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~ 329 (394)
T 3b7f_A 259 DR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD 329 (394)
T ss_dssp ET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC
T ss_pred CC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC
Confidence 42 23332222210001 34567888863 344444421 2 56777655556787765
No 425
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=89.36 E-value=0.32 Score=32.68 Aligned_cols=44 Identities=14% Similarity=0.186 Sum_probs=34.9
Q ss_pred ccccCCCCCCCceEeCCCCe-----eeeHHHHHHHHHhc--CCCCCCCCCCC
Q 010669 2 NCSISGEVPEEPVVSKNSGL-----LFEKRLIERHILDY--GKCPVTGEPLT 46 (504)
Q Consensus 2 ~c~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~p~~~~~~~ 46 (504)
.|.|+.+-..+|.++| +.+ .|=+.+|.+||... .+||+++.+..
T Consensus 8 ~CrIC~~~~~~~l~~P-C~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 8 VCWICNEELGNERFRA-CGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp EETTTTEECSCCCCCS-CCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred EeEEeecCCCCceecC-cCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 5888877777788888 332 78999999999974 46999998764
No 426
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.13 E-value=12 Score=36.87 Aligned_cols=110 Identities=12% Similarity=0.139 Sum_probs=62.5
Q ss_pred cceeEEEEeeCCC-EEEEEeCCCcEEEEeCCCCCCcceeEEec---------cCCcCeEEEEEccC----CCEEEEEeC-
Q 010669 266 KKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYDCKHTLK---------DHTAEVQAVTVHAT----NKYFVTASL- 330 (504)
Q Consensus 266 ~~v~~l~~s~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~l~~~p~----~~~l~s~s~- 330 (504)
...+.|+|.|++. .|+++...|.|++++.........+..+. ........|+|+|+ +.++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4468899999986 45566788999999754321111222221 11356889999996 443333332
Q ss_pred -C----------CeEEEEECCC----------CeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCC
Q 010669 331 -D----------NTWCFYDLSS----------GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378 (504)
Q Consensus 331 -d----------g~i~iwd~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~d 378 (504)
+ ..|.-|.+.. .+.+..+... ........+.|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~---~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL---HRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES---SSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC---CCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1444466542 1233332211 122346889999999877765543
No 427
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=88.78 E-value=1.1 Score=35.70 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=48.6
Q ss_pred HhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 74 GMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 74 ~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
-.++.+.+.+.-+.-.+.+.+..++.||..+-.+.+.+.+-+.++.+|.++++..+.+++..+.
T Consensus 71 ~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 71 FKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666666667777777788888888888888888888888888888888888876543
No 428
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=87.45 E-value=1.5 Score=32.03 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=47.0
Q ss_pred hhhhhhHHHHHhhhhhHHHHHHHHHHHhH-hhhcccchhHHHHHHhcchhHHHHHHHHHh
Q 010669 75 MFQNEWDGLMLSNFALEQQLHTARQELSH-ALYQHDAACRVIARLKKERDEARSLLAQSE 133 (504)
Q Consensus 75 ~~q~Ewda~~le~~~lr~~l~~~~~els~-aly~~daa~rv~a~l~kErd~ar~~l~~~~ 133 (504)
-.|.||+.|=-+.-.|+.++..+..+|+. .+|+.|.+ .++.+.++.+++..+|..+.
T Consensus 19 keqrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~--~~~~l~~~l~~~e~eLe~~~ 76 (89)
T 2lw1_A 19 KLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHE--QTQKVLADMAAAEQELEQAF 76 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999986 67988875 46677788877777776654
No 429
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=87.02 E-value=1.4 Score=30.40 Aligned_cols=56 Identities=21% Similarity=0.157 Sum_probs=48.1
Q ss_pred HHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 82 GLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 82 a~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
++-.+|..|+.++..+.++|.++...++....-+.++..-.|-.-.+|.++...+.
T Consensus 11 ~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~La 66 (72)
T 3cve_A 11 EVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLA 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56678999999999999999999999999999999998888877777777765543
No 430
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=86.19 E-value=1.6 Score=30.81 Aligned_cols=56 Identities=21% Similarity=0.185 Sum_probs=48.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 82 GLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 82 a~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
++-.+|..|+.++..+.++|.++..+++.+..-+.++..-.|-.-.+|.+++..+.
T Consensus 17 ~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLa 72 (79)
T 3cvf_A 17 DLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLA 72 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 66778999999999999999999999999999999998888877777777765543
No 431
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=85.90 E-value=38 Score=35.79 Aligned_cols=253 Identities=13% Similarity=0.104 Sum_probs=122.7
Q ss_pred CCeEEEEeccC-CCEEEEEeCCCcEEEEcCCCCceEEEcccC-------ccceeEEEEeeC-CCEEEEEeCCCc----EE
Q 010669 224 PGIVSLDIHYS-KDVIATGGVDTNAVLFDRPSGQIVTTLSGH-------SKKVTSVKFVTE-GDLFLTGSADKT----VR 290 (504)
Q Consensus 224 ~~I~~~~~s~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~s~~-~~~l~s~s~dg~----i~ 290 (504)
..|.+|+++|. ...+++++..|.|...+ ..|+.-..+..+ ...|.+|++.|. .+.++.+..+.. -.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 47999999996 35666677667665554 345544444332 246999999873 344444433211 33
Q ss_pred EEeC-CCCCCcceeEEe-c--c---CCcCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeEEEEeecCC-CCCCCCCeE
Q 010669 291 VWQG-SEDGNYDCKHTL-K--D---HTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAG-TDGRPEGYT 361 (504)
Q Consensus 291 iwd~-~~~~~~~~~~~~-~--~---h~~~v~~l~~~p~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~ 361 (504)
||.- +.+..+..+..- . . ....+..++++|.. +.++.+...+.|. ...+.|+....+.... .......+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCeE
Confidence 4433 333344443210 0 0 01135667888753 4555565344332 2333344333332110 001124578
Q ss_pred EEEECC-CCCEEEEEeCC-CcEEEEEcCCCceeeeeeC-CCC-----------------CeEEEEEcC-CCcEEEEEe--
Q 010669 362 SAAFHP-DGLILGTGTSE-ALVKIWDVKSQANVAKFDG-HVG-----------------AVTAISFSE-NGYYLATAA-- 418 (504)
Q Consensus 362 ~~~~~p-dg~~l~~g~~d-g~I~iwd~~~~~~~~~~~~-~~~-----------------~i~~l~~s~-~g~~l~s~~-- 418 (504)
.+.++| ++..++++..+ +.|.. ....++.-..+.+ ..+ .+..+.+.| .+.++++..
T Consensus 173 ~i~~~p~~~~~~~~~~~~~~~v~~-S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~ 251 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATAPQGMYV-THDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADY 251 (789)
T ss_dssp EEEECTTSTTCEEEEESSTTCEEE-ESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESS
T ss_pred EEEECCCCCCEEEEEEcCCCeEEE-EcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecC
Confidence 999998 44555555544 33322 2222332222111 111 126778877 444444421
Q ss_pred ------CCc-EEEEEcCCCcceeeeecCCC----------CC---CeeEEEECCCC-CEEEEEeCc-------EEEEEee
Q 010669 419 ------HDG-VKLWDLRKLKNFRSFESSDS----------ET---PTNSVDFDHSG-SYLAVASAD-------IRVYQVA 470 (504)
Q Consensus 419 ------~d~-v~vwd~~~~~~~~~~~~~~~----------~~---~v~~i~~~~~g-~~l~~~~~d-------i~vw~~~ 470 (504)
..+ |..-+ ..++....+..... .. .+..++++|.. ..+++++.+ ..||.-.
T Consensus 252 ~~p~~g~~g~l~~S~-DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~ 330 (789)
T 1sqj_A 252 PGPWGVTFGEVWRQN-RTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLST 330 (789)
T ss_dssp CSSSCCCCCCEEEEE-TTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEES
T ss_pred CCCCCCCCceEEEEe-CCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEec
Confidence 233 44333 22322222221100 01 34688898753 455555432 6777766
Q ss_pred ccCccceeEE
Q 010669 471 SVKADWNCIK 480 (504)
Q Consensus 471 ~~~~~~~~i~ 480 (504)
...++|+.+.
T Consensus 331 DgG~tW~~~~ 340 (789)
T 1sqj_A 331 DAGATWKDVT 340 (789)
T ss_dssp STTSSEEEHH
T ss_pred CCCCCceeCc
Confidence 6667788775
No 432
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.74 E-value=22 Score=38.66 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=33.5
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 010669 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVS 349 (504)
Q Consensus 312 ~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 349 (504)
.+.++...++..++++-+.|+++++|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888899999999999999999999988764
No 433
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=83.87 E-value=0.96 Score=23.33 Aligned_cols=24 Identities=38% Similarity=0.509 Sum_probs=19.2
Q ss_pred hhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 79 EWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 79 Ewda~~le~~~lr~~l~~~~~els 102 (504)
|.||+-.||-.|+|.+..++|..+
T Consensus 1 eidalefendaleqkiaalkqkia 24 (28)
T 3ra3_A 1 EIDALEFENDALEQKIAALKQKIA 24 (28)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHhccHHHHHHHHHHHHHHH
Confidence 568888888889888888887654
No 434
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=83.44 E-value=21 Score=32.32 Aligned_cols=183 Identities=15% Similarity=0.083 Sum_probs=88.2
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
.|..++..... .++. . ||.|+.|-......+..-..-...|..++...+ ..+.-. ||.|..|-....+... .
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg--~ 135 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT--V 135 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS--C
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC--C
Confidence 35555544322 2333 4 888888865432111110111235777765433 333334 8999999765433211 1
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iw 384 (504)
. ......|..++.-. .+.+.-. ||.+..|-......+.... .....|..++.-.+.. ++. .||.|+.|
T Consensus 136 ~-~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~gqlg~p~-----~~~~~v~~i~~G~~hs-~al--~~G~v~~w 203 (282)
T 3qhy_B 136 P-AEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFGQTTVPA-----EAQSGVDDVAGGIFHS-LAL--KDGKVIAW 203 (282)
T ss_dssp C-GGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTTSCCG-----GGGSSEEEEEECSSEE-EEE--ETTEEEEE
T ss_pred C-ccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCCCCCCce-----ecCCCeEEEEecCCEE-EEE--ECCeEEEE
Confidence 1 11234577766542 2333334 7999999765422111000 1123466666554433 333 48999999
Q ss_pred EcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCCC
Q 010669 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430 (504)
Q Consensus 385 d~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~~ 430 (504)
=....-.+..-......|..|+-..+. .++.. ++ |+.|=....
T Consensus 204 G~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 204 GDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp ECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEEESTTCC
T ss_pred ECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEEecCCCC
Confidence 764422211111112356777655433 33333 55 999965543
No 435
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=83.44 E-value=0.68 Score=35.65 Aligned_cols=13 Identities=62% Similarity=1.017 Sum_probs=10.8
Q ss_pred cCCCCCCCCCCCC
Q 010669 35 YGKCPVTGEPLTM 47 (504)
Q Consensus 35 ~~~~p~~~~~~~~ 47 (504)
.+.||+||.+++.
T Consensus 47 g~~CPvCgs~l~~ 59 (112)
T 1l8d_A 47 KGKCPVCGRELTD 59 (112)
T ss_dssp SEECTTTCCEECH
T ss_pred CCCCCCCCCcCCH
Confidence 4579999999884
No 436
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=78.07 E-value=7.8 Score=32.24 Aligned_cols=50 Identities=24% Similarity=0.214 Sum_probs=36.7
Q ss_pred hhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhh
Q 010669 86 SNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQ 135 (504)
Q Consensus 86 e~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~ 135 (504)
+...||+++...++||...+.....-...|..+.+|..++|.++.....+
T Consensus 86 ~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~k 135 (175)
T 3lay_A 86 QTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRVK 135 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45578899999999997666555555667778888888888877665543
No 437
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=77.89 E-value=8 Score=28.60 Aligned_cols=64 Identities=16% Similarity=0.159 Sum_probs=53.6
Q ss_pred HhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 74 GMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 74 ~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
+.|-||=-+++.+.-.|+-.|+...+.++..-.++.--+|-..++.+.-+.+...++.++.++.
T Consensus 19 AQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 19 AQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999998887777777788888888888888888777776664
No 438
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.65 E-value=40 Score=30.37 Aligned_cols=182 Identities=16% Similarity=0.096 Sum_probs=89.2
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEEcCCCCceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCCCCCcceeE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH 304 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 304 (504)
.|..++.... ..++. . ||.|+.|-......+..-......|..++..... .++. . ||.|..|-....+......
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 3555554322 22232 4 8888888654321111111122357777664332 2333 4 8999999765433211111
Q ss_pred EeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 010669 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384 (504)
Q Consensus 305 ~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~pdg~~l~~g~~dg~I~iw 384 (504)
.-...|..++... .+.+.-+ ||.|+.|-......+.... .....|..++.-.+..+++ . ||.|+.|
T Consensus 99 ---~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~-----~~~~~i~~i~~G~~~~~~l--~-~G~v~~w 164 (282)
T 3qhy_B 99 ---EARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPA-----EAQSGVTALDGGVYTALAV--K-NGGVIAW 164 (282)
T ss_dssp ---GGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCG-----GGGSSEEEEEECSSEEEEE--E-TTEEEEE
T ss_pred ---ccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCc-----cCCCCeEEEEcccCEEEEE--E-CCEEEEe
Confidence 1124577776653 3444445 9999999765422111000 1123466666554433222 3 7888888
Q ss_pred EcCCCceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcCC
Q 010669 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 429 (504)
Q Consensus 385 d~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~~ 429 (504)
-....-.+..-..-...|..|+-..+. .++. .++ |+.|=...
T Consensus 165 G~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 165 GDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp ECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred cCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence 765422221111113467777664332 3333 365 99996544
No 439
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=77.41 E-value=7.9 Score=22.72 Aligned_cols=45 Identities=24% Similarity=0.248 Sum_probs=31.1
Q ss_pred hHHHhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHH
Q 010669 71 GMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLL 129 (504)
Q Consensus 71 ~ll~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l 129 (504)
+|...|.||-.++--|+-+|++.--.. ...||-|.||...+|..+
T Consensus 3 nlvaqlenevaslenenetlkkknlhk--------------kdliaylekeianlrkki 47 (49)
T 3he5_A 3 NLVAQLENEVASLENENETLKKKNLHK--------------KDLIAYLEKEIANLRKKI 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcccHHHHHhcccH--------------HHHHHHHHHHHHHHHHHh
Confidence 577889999888888888887643221 235677777777666544
No 440
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=77.28 E-value=5.4 Score=29.52 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=31.9
Q ss_pred HHHhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhccc
Q 010669 72 MLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHD 109 (504)
Q Consensus 72 ll~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~d 109 (504)
-+..+..|.|.|-.|+-.||++.+.+.-+|.+...+-|
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd 50 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGD 50 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 67788899999999999999999999999998444333
No 441
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=75.64 E-value=8.7 Score=24.45 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=31.3
Q ss_pred HHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhh
Q 010669 82 GLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQ 135 (504)
Q Consensus 82 a~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~ 135 (504)
+|+--.|.||-|+..++||.. -..+-.+|.-.||..|+.+-..
T Consensus 7 SlVDtVYaLkDqV~eL~qe~k-----------~m~k~lEeEqkARk~LE~~vrk 49 (56)
T 2w6b_A 7 SLVDTVYALKDEVQELRQDNK-----------KMKKSLEEEQRARKDLEKLVRK 49 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHH
Confidence 456678999999999999865 3455566677778888776543
No 442
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=72.89 E-value=9.1 Score=25.73 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=42.2
Q ss_pred HHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 84 MLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 84 ~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
.-+.-+|++++.++++|+...=-|...| --|+|.+..|.+.++|+.+..++.
T Consensus 5 ~~~~~~l~~E~~~lk~E~~stSaQDeFA--KWaKL~Rk~DKl~~ele~l~~~l~ 56 (65)
T 3sja_C 5 SKKYLAKVKERHELKEFNNSISAQDNYA--KWTKNNRKLDSLDKEINNLKDEIQ 56 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTTTHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHH--HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455688999999999998777777777 678899999999999988877664
No 443
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=70.18 E-value=7.3 Score=27.14 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=46.8
Q ss_pred hhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHH
Q 010669 75 MFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQ 131 (504)
Q Consensus 75 ~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~ 131 (504)
+|+.|-+...--...|+.+|.+++++....+-.+..-..|-.+|..|....|.-|+.
T Consensus 2 ~l~~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLEG 58 (74)
T 2xv5_A 2 GSARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEG 58 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356666666666778899999999999988888888888888999999888888753
No 444
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=69.26 E-value=14 Score=25.52 Aligned_cols=55 Identities=25% Similarity=0.241 Sum_probs=37.8
Q ss_pred HhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 74 GMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 74 ~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
..|+.|...-.+-..+|+++|+.++.| |--..||.-.+....||..|+++.....
T Consensus 25 ~~lrq~I~DKQ~~i~~Lt~eLq~A~~e---------aNpaeIA~~~~~L~qAraDL~~l~r~~a 79 (90)
T 4b6x_A 25 AALRQEIEDKQLMVNNLTDELQDAIDE---------ANPAEIANTSQQLRHARADLADLQRRFA 79 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc---------cCHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 346666655555555666666666655 3344688888888899999998887654
No 445
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=68.71 E-value=9.6 Score=28.77 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=40.8
Q ss_pred hhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhh
Q 010669 86 SNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQ 135 (504)
Q Consensus 86 e~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~ 135 (504)
|.-+|.-.|+.++..|..+.-+.|+. +|+++.+|.+.+..+++.+...
T Consensus 11 Eiq~L~drLD~~~rKlaaa~~rgd~~--~i~qf~~E~~~l~k~I~~lk~~ 58 (123)
T 2lf0_A 11 EIKRLSDRLDAIRHQQADLSLVEAAD--KYAELEKEKATLEAEIARLREV 58 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTTCTT--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 55677778889999999999888887 8999999999999988887654
No 446
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.72 E-value=76 Score=28.46 Aligned_cols=199 Identities=10% Similarity=0.011 Sum_probs=111.7
Q ss_pred CCCCeEEEEeccCCCEEEEEeCCCcEEEE---cCCCCceEEEcccCccceeEEEEee--CCCEEEEEeCCCcEEEEeCCC
Q 010669 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLF---DRPSGQIVTTLSGHSKKVTSVKFVT--EGDLFLTGSADKTVRVWQGSE 296 (504)
Q Consensus 222 ~~~~I~~~~~s~~~~~l~sg~~dg~i~vw---d~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~s~dg~i~iwd~~~ 296 (504)
..+.+..+......+.|+.-+.+|.++-- ++..+.....+. ....|..+.. + +..+++..+.+|.++-..+..
T Consensus 22 ~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 22 EKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp SCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHH
Confidence 34566666655556666667778887654 333221111133 3455666644 4 467899999999999887654
Q ss_pred CC---CcceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-------eEEEEeecCCCCCCCCCeEEEEEC
Q 010669 297 DG---NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG-------ICLTQVSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 297 ~~---~~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~ 366 (504)
-. .......+.. .+.+..+........++..+..|.+..+....- .-+..+. . .....|..+...
T Consensus 100 ~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~---L-~~~d~vv~~~~~ 174 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIK---L-EKNDETSGLRIW 174 (276)
T ss_dssp TTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC---C-CTTCCEEEEEEE
T ss_pred hhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEc---c-CCCCEEEEEEEe
Confidence 21 0011112222 345666655556668888999999888875321 1111111 1 122456666555
Q ss_pred CCCCEEEEEeCCCcEEEEEcCC-------CceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEE--EEcC
Q 010669 367 PDGLILGTGTSEALVKIWDVKS-------QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKL--WDLR 428 (504)
Q Consensus 367 pdg~~l~~g~~dg~I~iwd~~~-------~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~v--wd~~ 428 (504)
+++..++..+..|.++...+.. ++-+..+ ...+.+..+....+...++..+.+| +.. ++..
T Consensus 175 ~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 175 NGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 5667888889999998888643 2223333 2334455544433344555556666 555 6654
No 447
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=65.05 E-value=8.3 Score=24.87 Aligned_cols=25 Identities=16% Similarity=0.112 Sum_probs=18.7
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 78 NEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 78 ~Ewda~~le~~~lr~~l~~~~~els 102 (504)
.|+|+|..|+-+||++++.+++++.
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~ 43 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENK 43 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4778888888888888887776543
No 448
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=64.81 E-value=12 Score=20.03 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=14.6
Q ss_pred hhhhhHHHHHhhhhhHHHHHHHHHH
Q 010669 76 FQNEWDGLMLSNFALEQQLHTARQE 100 (504)
Q Consensus 76 ~q~Ewda~~le~~~lr~~l~~~~~e 100 (504)
|..|-..---|||+|++++.++..|
T Consensus 6 lekevaqaeaenyqleqevaqlehe 30 (33)
T 1fmh_A 6 LEKEVAQAEAENYQLEQEVAQLEHE 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4444444455777777766665544
No 449
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=63.89 E-value=11 Score=21.59 Aligned_cols=28 Identities=39% Similarity=0.474 Sum_probs=19.7
Q ss_pred HhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHH
Q 010669 85 LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEAR 126 (504)
Q Consensus 85 le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar 126 (504)
.||-.|.+.+++...| ||+|.+|.++++
T Consensus 7 ~ENekLhk~ie~Kdee--------------Ia~Lk~eN~eL~ 34 (37)
T 1t6f_A 7 KENEKLHKEIEQKDNE--------------IARLKKENKELA 34 (37)
T ss_dssp HHHHHHHHHHHHHHHH--------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--------------HHHHHHhhHHHH
Confidence 5777888887776555 677777776653
No 450
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.23 E-value=1.7e+02 Score=31.62 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeee
Q 010669 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~ 396 (504)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356788888888999999999999999999998877653
No 451
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=63.12 E-value=0.75 Score=32.05 Aligned_cols=18 Identities=33% Similarity=0.944 Sum_probs=16.2
Q ss_pred CCCCCCCCCCCCCccccc
Q 010669 36 GKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 36 ~~~p~~~~~~~~~~~~~~ 53 (504)
.+||++|++|+-.+||+-
T Consensus 9 ~~~PlCG~~L~W~eLIeQ 26 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEE 26 (95)
T ss_dssp EECSSSCCEECHHHHHHH
T ss_pred ccCCcCCCccCHHHHHHH
Confidence 479999999999999876
No 452
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=62.83 E-value=15 Score=26.64 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=43.7
Q ss_pred HHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 82 GLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 82 a~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
...-+.-+|++++.+++.|+...=-|.+.| --|||.+..|.+.++|+.+..++.
T Consensus 20 ~~a~~~~~lk~E~~~lk~E~~stSaQDeFA--KWaKL~Rk~DKl~~ele~l~~~l~ 73 (93)
T 3sjb_C 20 ELSKKYLAKVKERHELKEFNNSISAQDNYA--KWTKNNRKLDSLDKEINNLKDEIQ 73 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCTTTCHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667788999999999998777777777 678888999999888888877765
No 453
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.74 E-value=30 Score=34.75 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=43.4
Q ss_pred CCeEEEEEcCCCcEEEEEeC------------C-cEEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEEeC
Q 010669 400 GAVTAISFSENGYYLATAAH------------D-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462 (504)
Q Consensus 400 ~~i~~l~~s~~g~~l~s~~~------------d-~v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~~~ 462 (504)
.....|.|.++|.+.+.... . .|..++..+++....+..+ ....++.++|+||++.|+++-.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P-~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC-CCccccCCEECCCCCEEEEEEe
Confidence 35788999999987774322 1 2677777667654444332 2467899999999999987743
No 454
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=61.54 E-value=31 Score=24.39 Aligned_cols=67 Identities=10% Similarity=0.054 Sum_probs=50.1
Q ss_pred hHHHhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 71 GMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 71 ~ll~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
-=+..+++|-|..+-..-.+..++....+....+--...+-.+-|..+..+.|.+.+.|...+..+.
T Consensus 6 kKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLe 72 (81)
T 1ic2_A 6 KKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLE 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788888887777778888888888777666666666677777888888888888877766554
No 455
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.43 E-value=26 Score=38.96 Aligned_cols=38 Identities=16% Similarity=0.132 Sum_probs=32.0
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCceeeeee
Q 010669 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~~~~~~~~ 396 (504)
.+.+++..++..++++-+.|+++|+||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566777888999999999999999999998887653
No 456
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=61.20 E-value=11 Score=19.92 Aligned_cols=25 Identities=32% Similarity=0.537 Sum_probs=16.5
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 78 NEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 78 ~Ewda~~le~~~lr~~l~~~~~els 102 (504)
.||+|+-...-.|+..|+.+.+.|.
T Consensus 1 ~ewealekkcaalesklqalekkle 25 (31)
T 3ljm_A 1 XEWEALEKKCAALESKLQALEKKLE 25 (31)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3788887666677777766665543
No 457
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=60.49 E-value=1.7e+02 Score=30.76 Aligned_cols=214 Identities=10% Similarity=0.099 Sum_probs=107.4
Q ss_pred ccceeEEEEeeC-CCEEEEEeCCCcEEEEeCCCCCCcceeEEecc----CCcCeEEEEEccCC-CEEEEEeCCC-----e
Q 010669 265 SKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD----HTAEVQAVTVHATN-KYFVTASLDN-----T 333 (504)
Q Consensus 265 ~~~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~l~~~p~~-~~l~s~s~dg-----~ 333 (504)
.+.|.+|+++|. ...++.++..+.|...+ +.+..+..+..... ....|.+|+++|.. +.++.+..+. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 457999999984 45677777777665543 22333443221111 12469999999843 4444443221 2
Q ss_pred EEEEECCCCeEEEEeecCCCC----CCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcC-CCceeeeeeC------CCCC
Q 010669 334 WCFYDLSSGICLTQVSDAGTD----GRPEGYTSAAFHP-DGLILGTGTSEALVKIWDVK-SQANVAKFDG------HVGA 401 (504)
Q Consensus 334 i~iwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p-dg~~l~~g~~dg~I~iwd~~-~~~~~~~~~~------~~~~ 401 (504)
..+...+.|+....+...... .....+..++++| +...+.++...+.| |-.. .++.-..+.. ....
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCCCC
Confidence 223344555554444321000 0011356788888 34566666644433 3222 2332222211 1245
Q ss_pred eEEEEEcCC-CcEEEEEeCC-c-EEEEEcCCCcceeeeecCCCC----------------CCeeEEEECCCCCEEEEE--
Q 010669 402 VTAISFSEN-GYYLATAAHD-G-VKLWDLRKLKNFRSFESSDSE----------------TPTNSVDFDHSGSYLAVA-- 460 (504)
Q Consensus 402 i~~l~~s~~-g~~l~s~~~d-~-v~vwd~~~~~~~~~~~~~~~~----------------~~v~~i~~~~~g~~l~~~-- 460 (504)
+..+.++|. +..++++..+ + |. .....++....+...... ..+..+.++|....|+++
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~~~~v~-~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~ 249 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATAPQGMY-VTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYA 249 (789)
T ss_dssp EEEEEECTTSTTCEEEEESSTTCEE-EESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEE
T ss_pred eEEEEECCCCCCEEEEEEcCCCeEE-EEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEe
Confidence 888999884 4455555544 3 43 233333333322211100 112677888744444444
Q ss_pred -------eCcEEEEEeeccCccceeEEEc
Q 010669 461 -------SADIRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 461 -------~~di~vw~~~~~~~~~~~i~~~ 482 (504)
+....||.-....++|+.+...
T Consensus 250 ~~~~p~~g~~g~l~~S~DgG~tW~~~~~~ 278 (789)
T 1sqj_A 250 DYPGPWGVTFGEVWRQNRTSGAWDDITPR 278 (789)
T ss_dssp SSCSSSCCCCCCEEEEETTTCCEEECCCC
T ss_pred cCCCCCCCCCceEEEEeCCCCceEECcCC
Confidence 2336777776667788877653
No 458
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=60.44 E-value=1.6e+02 Score=30.56 Aligned_cols=214 Identities=12% Similarity=0.107 Sum_probs=103.3
Q ss_pred ceeEEEEeeC-CCEEEEEeCCCcEEEEeCCCCCCcceeEEecc----CCcCeEEEEEccC-CCEEEEEeCC-------Ce
Q 010669 267 KVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD----HTAEVQAVTVHAT-NKYFVTASLD-------NT 333 (504)
Q Consensus 267 ~v~~l~~s~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~l~~~p~-~~~l~s~s~d-------g~ 333 (504)
.|..|+++|. ...++.+...|.|..++- .+..+..+..... ....|.+|+++|. .+.++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999985 355666665666555532 2233333221111 1245899999984 3444444321 01
Q ss_pred EEEE-ECCCCeEEEEeecCCCC-C---CCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcC-CCc---eeeeeeC------
Q 010669 334 WCFY-DLSSGICLTQVSDAGTD-G---RPEGYTSAAFHP-DGLILGTGTSEALVKIWDVK-SQA---NVAKFDG------ 397 (504)
Q Consensus 334 i~iw-d~~~~~~~~~~~~~~~~-~---~~~~v~~~~~~p-dg~~l~~g~~dg~I~iwd~~-~~~---~~~~~~~------ 397 (504)
..|| ..+.|+....+...... . ....+..++++| +...++++...|. -||-.. .++ .+..+..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~ 181 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPGTYIY 181 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCCCCBS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCccccc
Confidence 2333 33444433333211000 0 011246799998 4466666663311 133222 222 2221111
Q ss_pred --------CCCCeEEEEEcCCC-------cEEEEEeCCc-EEEEEcC-CCcceeeeecCCCCCCeeEEEECCCCCEEEEE
Q 010669 398 --------HVGAVTAISFSENG-------YYLATAAHDG-VKLWDLR-KLKNFRSFESSDSETPTNSVDFDHSGSYLAVA 460 (504)
Q Consensus 398 --------~~~~i~~l~~s~~g-------~~l~s~~~d~-v~vwd~~-~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~ 460 (504)
....+..+.++|.. ..+.++..++ -.||-.. .++....+...........+.++|++.+.++.
T Consensus 182 ~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 182 DPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp CTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEE
T ss_pred CcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEe
Confidence 11247788888743 2455554442 2234333 33333333221111122456788876665554
Q ss_pred e---------CcEEEEEeeccCccceeEEEc
Q 010669 461 S---------ADIRVYQVASVKADWNCIKTF 482 (504)
Q Consensus 461 ~---------~di~vw~~~~~~~~~~~i~~~ 482 (504)
. ....||.......+|+.+...
T Consensus 262 ~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~ 292 (737)
T 2cn3_A 262 GDTCGPYDGNGKGQVWKFNTRTGEWIDITPI 292 (737)
T ss_dssp ESSCCSSCCSCCEEEEEEETTTCCEEECCSS
T ss_pred cCCCCccccccCceEEEEeCCCCCEEEccCC
Confidence 3 227888877777788776543
No 459
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=60.43 E-value=16 Score=29.22 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHH
Q 010669 92 QQLHTARQELSHALYQHDAACRVIARLKKERDEARSL 128 (504)
Q Consensus 92 ~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~ 128 (504)
+.++.++.|+...-.+...+..-..++.+|.+.+-+.
T Consensus 96 K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~R 132 (152)
T 3a7p_A 96 KNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVAR 132 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444555444444444444555555555444333
No 460
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.03 E-value=28 Score=35.26 Aligned_cols=59 Identities=19% Similarity=0.076 Sum_probs=42.1
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEEcCCCceeeeeeCC-CCCeEEEEEcCCCcEEEEE
Q 010669 359 GYTSAAFHPDGLILGTGTSE------------ALVKIWDVKSQANVAKFDGH-VGAVTAISFSENGYYLATA 417 (504)
Q Consensus 359 ~v~~~~~~pdg~~l~~g~~d------------g~I~iwd~~~~~~~~~~~~~-~~~i~~l~~s~~g~~l~s~ 417 (504)
..-.|+|+|.|+++++-..+ ..+.+.+..+++....+.++ ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34678999999977664322 24666677777766555554 3589999999999888776
No 461
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=59.78 E-value=9.1 Score=27.83 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=41.4
Q ss_pred HhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 85 LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 85 le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
-+.-+|++++.+++.|+...=-|.+.| --|+|.+..|.+.++|+.+..++.
T Consensus 30 ~~~~~lk~E~~~lk~E~~stSaQDEFA--KWAKL~Rk~DKl~~ele~l~~~L~ 80 (94)
T 3vlc_E 30 KKYLAKVKERHELKEFNNSISAQDNYA--KWTKNNRKLDSLDKEINNLKDEIQ 80 (94)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTTCHH--HHHHHHHHHHHHHHHTTTHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678888888999988777777777 678899999999999888887765
No 462
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=59.38 E-value=1.7e+02 Score=30.38 Aligned_cols=189 Identities=12% Similarity=0.095 Sum_probs=91.9
Q ss_pred eEEE-EeeCCCEEEEE-eC----CCcEEEEeCCCCCCcceeE-Eec--cCCc-----CeEEEEEccCCCEEEEEe-----
Q 010669 269 TSVK-FVTEGDLFLTG-SA----DKTVRVWQGSEDGNYDCKH-TLK--DHTA-----EVQAVTVHATNKYFVTAS----- 329 (504)
Q Consensus 269 ~~l~-~s~~~~~l~s~-s~----dg~i~iwd~~~~~~~~~~~-~~~--~h~~-----~v~~l~~~p~~~~l~s~s----- 329 (504)
..+. ++|++++++.+ |. -..++++|+.++. .+. .+. ...+ ....++|. +++.++.++
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~---~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKD---FVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKN 207 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTE---ECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCC---cCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCC
Confidence 3444 67888875543 22 2368999998852 111 111 0000 11334776 334444432
Q ss_pred ------CCCeEEEEECCCCe--EEEEeecCCCCCCCCCeEEEEECCCCC-----EEEEEe---CCCcEEEEEcCC--Cce
Q 010669 330 ------LDNTWCFYDLSSGI--CLTQVSDAGTDGRPEGYTSAAFHPDGL-----ILGTGT---SEALVKIWDVKS--QAN 391 (504)
Q Consensus 330 ------~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~~pdg~-----~l~~g~---~dg~I~iwd~~~--~~~ 391 (504)
....|+.|.+-+.. -...+... . .........++++. .+++.+ ....+.+.|... ++
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~---~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~- 282 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKKLFEVP---K-EYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK- 282 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEEEEECC---T-TSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-
T ss_pred CcCcCCCCCEEEEEECCCChHHCeEEeccC---C-CceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-
Confidence 12468888876542 22223211 1 12234455666665 244433 224566666653 32
Q ss_pred eeeeeCCCCCeEEEEEcCCCcEEEEEe----------CCc-EEEEEcCCCc-------ceeeeecCCCCCCeeEEEECCC
Q 010669 392 VAKFDGHVGAVTAISFSENGYYLATAA----------HDG-VKLWDLRKLK-------NFRSFESSDSETPTNSVDFDHS 453 (504)
Q Consensus 392 ~~~~~~~~~~i~~l~~s~~g~~l~s~~----------~d~-v~vwd~~~~~-------~~~~~~~~~~~~~v~~i~~~~~ 453 (504)
+..+...... .+..+.++.+++... ..+ |.+.|+.+.. ....+-.+.....+..+.|..+
T Consensus 283 ~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 283 LQKINMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp EEECCSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred ceEeecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 2223212211 123344665555331 234 8889987642 2333333333556788899876
Q ss_pred CCEEEEEeCc----EEEEEe
Q 010669 454 GSYLAVASAD----IRVYQV 469 (504)
Q Consensus 454 g~~l~~~~~d----i~vw~~ 469 (504)
.++++...+ +.++++
T Consensus 361 -~l~~~~~~~~~~~l~~~~~ 379 (711)
T 4hvt_A 361 -RVFLATYDNVVAKVVTFTL 379 (711)
T ss_dssp -CEEEEEEETTEEEEEEECE
T ss_pred -EEEEEEEECCEEEEEEEEC
Confidence 455555544 666665
No 463
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=59.29 E-value=6.3 Score=25.89 Aligned_cols=33 Identities=9% Similarity=0.307 Sum_probs=22.7
Q ss_pred hhhHHHhhhhhhHHHHHhhhhhHHHHHHHHHHH
Q 010669 69 IPGMLGMFQNEWDGLMLSNFALEQQLHTARQEL 101 (504)
Q Consensus 69 ip~ll~~~q~Ewda~~le~~~lr~~l~~~~~el 101 (504)
+-..|..+.++|+++.-|+-.|+.++..++++|
T Consensus 25 VD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 25 VNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445788888888888888888888888776653
No 464
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=59.23 E-value=24 Score=28.05 Aligned_cols=60 Identities=15% Similarity=0.080 Sum_probs=31.3
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhhcC
Q 010669 78 NEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIM 137 (504)
Q Consensus 78 ~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~~~ 137 (504)
+|+-.+.-+.-.|+++++...+|+.....+.-.+..-+..+.+|..++++++..++.++.
T Consensus 68 dEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~ 127 (138)
T 3hnw_A 68 DDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIV 127 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444444444444444444434444455555666677777777777776654
No 465
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=59.08 E-value=24 Score=25.83 Aligned_cols=17 Identities=12% Similarity=0.186 Sum_probs=7.8
Q ss_pred cchhHHHHHHHHHhhhc
Q 010669 120 KERDEARSLLAQSERQI 136 (504)
Q Consensus 120 kErd~ar~~l~~~~~~~ 136 (504)
+++.....+|++|+.++
T Consensus 47 ~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 47 EEADKLNKEVEDLTASL 63 (97)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444455555443
No 466
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=57.55 E-value=1.3e+02 Score=28.46 Aligned_cols=150 Identities=14% Similarity=0.190 Sum_probs=84.7
Q ss_pred CcCeEEEEEc---cC----CCEEEEEe-CCCeEEEEECCCCeEEEEeecCC-CC--------CC----CCCeEEEEECCC
Q 010669 310 TAEVQAVTVH---AT----NKYFVTAS-LDNTWCFYDLSSGICLTQVSDAG-TD--------GR----PEGYTSAAFHPD 368 (504)
Q Consensus 310 ~~~v~~l~~~---p~----~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~-~~--------~~----~~~v~~~~~~pd 368 (504)
.+.+..+.+. |. +.++..+. ..+.|.++|+.+++..+.....- .. +. ...+..++++|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 3567888877 22 33444444 46789999999998776653110 00 00 246888999997
Q ss_pred ----CCEEEEEeCCCcEEEEEc-----CCCceee--eeeCCC---CCeEEEEEc-CCCcEEEEEeCCc-EEEEEcCC-C-
Q 010669 369 ----GLILGTGTSEALVKIWDV-----KSQANVA--KFDGHV---GAVTAISFS-ENGYYLATAAHDG-VKLWDLRK-L- 430 (504)
Q Consensus 369 ----g~~l~~g~~dg~I~iwd~-----~~~~~~~--~~~~~~---~~i~~l~~s-~~g~~l~s~~~d~-v~vwd~~~-~- 430 (504)
++.|......+ -++|.+ ++..... +..+.. +.-..+++. .+|.++++--... |..|+..+ .
T Consensus 231 ~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~ 309 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPL 309 (381)
T ss_dssp CTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSB
T ss_pred cCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCcc
Confidence 67776665544 233433 2221111 111222 233456775 5787666666665 99999875 1
Q ss_pred --cceeeeecCCCCCCeeEEEECCCCCEEEEE
Q 010669 431 --KNFRSFESSDSETPTNSVDFDHSGSYLAVA 460 (504)
Q Consensus 431 --~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~ 460 (504)
.....+.....-..+..+.++.+|.+.+..
T Consensus 310 ~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 310 RMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred ccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 222333222234567888888777644443
No 467
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=56.24 E-value=1.2e+02 Score=27.85 Aligned_cols=199 Identities=13% Similarity=0.103 Sum_probs=109.7
Q ss_pred CeEEEEeccCCCEEEEEeCCCcEEEE---cCCCC------ceEEEc-c-cCccceeEEEEee---CCCEEEEEeCCCcEE
Q 010669 225 GIVSLDIHYSKDVIATGGVDTNAVLF---DRPSG------QIVTTL-S-GHSKKVTSVKFVT---EGDLFLTGSADKTVR 290 (504)
Q Consensus 225 ~I~~~~~s~~~~~l~sg~~dg~i~vw---d~~~~------~~~~~~-~-~h~~~v~~l~~s~---~~~~l~s~s~dg~i~ 290 (504)
.+..+......+.|+.-+..|.++-. ++... ..+..+ . .....|.++...+ +..+++..+.+|.++
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 45555544555666666677776644 44322 221111 1 1234455554433 467899999999999
Q ss_pred EEeCCCCCC----cceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEECC--CCe-------EEEEeecCCCCCCC
Q 010669 291 VWQGSEDGN----YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS--SGI-------CLTQVSDAGTDGRP 357 (504)
Q Consensus 291 iwd~~~~~~----~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~~--~~~-------~~~~~~~~~~~~~~ 357 (504)
--.+..-.. ......+.. .+.+..+........++..+..|.+..+... .-. -+..+. . ...
T Consensus 123 r~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~---L-~~~ 197 (327)
T 3uc1_A 123 KSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMR---F-NID 197 (327)
T ss_dssp EEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSC---C-CTT
T ss_pred EeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeec---C-CCC
Confidence 887644111 011122333 3456555555566788888999998888766 211 011111 1 223
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC-------ceee--eeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEc
Q 010669 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQ-------ANVA--KFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~dg~I~iwd~~~~-------~~~~--~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~ 427 (504)
..|..+...+++..++..+..|.++.-.+... +-+. .+....+.+..+....+...++..+.+| +.-++.
T Consensus 198 d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 198 DRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp CCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEG
T ss_pred CEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEeh
Confidence 45777776666778889999999988876332 1122 2222133455544444444555556665 556665
Q ss_pred C
Q 010669 428 R 428 (504)
Q Consensus 428 ~ 428 (504)
.
T Consensus 278 ~ 278 (327)
T 3uc1_A 278 R 278 (327)
T ss_dssp G
T ss_pred h
Confidence 4
No 468
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.05 E-value=36 Score=34.47 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=41.8
Q ss_pred CeEEEEEcCCCcEEEEEeCC------------c-EEEEEcCCCcceeeeecCCCCCCeeEEEECCCCCEEEEE
Q 010669 401 AVTAISFSENGYYLATAAHD------------G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA 460 (504)
Q Consensus 401 ~i~~l~~s~~g~~l~s~~~d------------~-v~vwd~~~~~~~~~~~~~~~~~~v~~i~~~~~g~~l~~~ 460 (504)
..-.|+|++.|.+++.-..+ . +.+.+..+++..+-+..+ ...+++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 45779999999866665432 2 555666666654444443 46899999999999998876
No 469
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=55.52 E-value=1.3e+02 Score=27.72 Aligned_cols=189 Identities=14% Similarity=0.137 Sum_probs=99.0
Q ss_pred eCCCEEEEEeCCCcEEEEeCCCCCC-cceeEEeccCCcCeEEEEEccCCCEEEEEeCCCeEEEEEC---CC------CeE
Q 010669 275 TEGDLFLTGSADKTVRVWQGSEDGN-YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL---SS------GIC 344 (504)
Q Consensus 275 ~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~~p~~~~l~s~s~dg~i~iwd~---~~------~~~ 344 (504)
|+..++++.+.+|.|+--.+..-.. ......+.. .+.+..+........++..+..|.++-+.. .. |..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 4566788889999988664331000 000112222 244555555556677888888888666544 21 221
Q ss_pred EEEeecCCCCCCCCCeEEE-EECC--CCCEEEEEeCCCcEEEEEcCCC--------ceeeeeeCCCCCeEEEEEcCCCcE
Q 010669 345 LTQVSDAGTDGRPEGYTSA-AFHP--DGLILGTGTSEALVKIWDVKSQ--------ANVAKFDGHVGAVTAISFSENGYY 413 (504)
Q Consensus 345 ~~~~~~~~~~~~~~~v~~~-~~~p--dg~~l~~g~~dg~I~iwd~~~~--------~~~~~~~~~~~~i~~l~~s~~g~~ 413 (504)
+.... .. .....|..+ .... ++.+++..+.+|.++-..+... .....+.. .+.+..+........
T Consensus 82 i~~~i--~L-~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~ 157 (323)
T 1wp5_A 82 IANII--PI-DRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNE 157 (323)
T ss_dssp GGGTS--CC-CTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSE
T ss_pred hhhcc--CC-CCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCE
Confidence 11111 11 122345544 4433 3567888899999999887422 22223332 245555555555556
Q ss_pred EEEEeCCc-EEEEEcCCC-------cceeeeecCCCCCCeeEEEECCCCC-EEEEEeCc--EEEEEe
Q 010669 414 LATAAHDG-VKLWDLRKL-------KNFRSFESSDSETPTNSVDFDHSGS-YLAVASAD--IRVYQV 469 (504)
Q Consensus 414 l~s~~~d~-v~vwd~~~~-------~~~~~~~~~~~~~~v~~i~~~~~g~-~l~~~~~d--i~vw~~ 469 (504)
++..+.+| +..|....- +-++-+.... ...|.++..-+++. .+++.+.. ++..++
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~ 223 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKL 223 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEH
Confidence 66677777 666665321 2223333322 34566664434444 56666665 555555
No 470
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=54.80 E-value=16 Score=35.22 Aligned_cols=28 Identities=39% Similarity=0.483 Sum_probs=19.2
Q ss_pred hhhhhHHHHHhhhhhHHHHHHHHHHHhHh
Q 010669 76 FQNEWDGLMLSNFALEQQLHTARQELSHA 104 (504)
Q Consensus 76 ~q~Ewda~~le~~~lr~~l~~~~~els~a 104 (504)
.|.|||.- -+.-..|.+++++|+||..+
T Consensus 306 ~~qew~~~-hp~~~Aer~~e~a~ael~~a 333 (551)
T 2b5u_A 306 RQQEWDAT-HPVEAAERNYERARAELNQA 333 (551)
T ss_dssp HHHHHHHH-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhc-CcHHHHHHHHHHHHHHHHHH
Confidence 67888743 23335677788888888865
No 471
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=54.74 E-value=1.3e+02 Score=27.46 Aligned_cols=189 Identities=12% Similarity=-0.021 Sum_probs=101.1
Q ss_pred cCCCEEEEEeCCCcEEEEcCCCCceEE---------EcccCccceeEEEEeeCCCEEEEEeCCCcEEEE---eCCCCCC-
Q 010669 233 YSKDVIATGGVDTNAVLFDRPSGQIVT---------TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW---QGSEDGN- 299 (504)
Q Consensus 233 ~~~~~l~sg~~dg~i~vwd~~~~~~~~---------~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iw---d~~~~~~- 299 (504)
|+..++++.+.+|.|+--.+.+.+... .++. .+.+..+........|+..+..|.+.-+ ++...+.
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 345678888999999876654322111 1222 2334444444455567777777875544 3333211
Q ss_pred --cceeE---EeccCCcCeEEEEEc---cCCCEEEEEeCCCeEEEEECCCCe-----EEEEeecCCCCCCCCCeEEEEEC
Q 010669 300 --YDCKH---TLKDHTAEVQAVTVH---ATNKYFVTASLDNTWCFYDLSSGI-----CLTQVSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 300 --~~~~~---~~~~h~~~v~~l~~~---p~~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~ 366 (504)
...+. .+. ....|.++..- .++.+++..+.+|.++...+..-. -+..+. .... ..+..+...
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~---l~~~-d~lv~~~~~ 154 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIK---LVDG-DELIGVDLT 154 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSC---CCTT-CCEEEEEEE
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEE---ECCC-CEEEEEEEe
Confidence 01111 122 23456665442 346689999999999998764211 111111 1122 345554444
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCC---------ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcC
Q 010669 367 PDGLILGTGTSEALVKIWDVKSQ---------ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428 (504)
Q Consensus 367 pdg~~l~~g~~dg~I~iwd~~~~---------~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~ 428 (504)
.+...++..+.+|.+..++...- .....+. ....|.++...+++..|++.+..| ++-.++.
T Consensus 155 ~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 155 SGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp CTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 44556777788898888876321 1112232 234566665555566788888887 7777763
No 472
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.69 E-value=55 Score=32.95 Aligned_cols=61 Identities=18% Similarity=0.064 Sum_probs=43.5
Q ss_pred CCeEEEEECCCCCEEEEEeC------------CCcEEEEEcCCCceeeeeeCC-CCCeEEEEEcCCCcEEEEEe
Q 010669 358 EGYTSAAFHPDGLILGTGTS------------EALVKIWDVKSQANVAKFDGH-VGAVTAISFSENGYYLATAA 418 (504)
Q Consensus 358 ~~v~~~~~~pdg~~l~~g~~------------dg~I~iwd~~~~~~~~~~~~~-~~~i~~l~~s~~g~~l~s~~ 418 (504)
.....+.|+++|.+.++-.. ...|..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999998874322 125777777777765555433 35689999999999888764
No 473
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=54.33 E-value=1.4e+02 Score=28.00 Aligned_cols=151 Identities=18% Similarity=0.059 Sum_probs=85.5
Q ss_pred eccCCCEEEEEeCCCcEEEEcCCC---------CceEEEcccCccceeEEEEeeCCCEEEEEeCCCcEEEE---eCCCCC
Q 010669 231 IHYSKDVIATGGVDTNAVLFDRPS---------GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW---QGSEDG 298 (504)
Q Consensus 231 ~s~~~~~l~sg~~dg~i~vwd~~~---------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iw---d~~~~~ 298 (504)
+-++..++++.+.+|.|+--.+.. +.....++. .+.+..+........|+..+..|.+.-+ ++...+
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 346778999999999998753311 223334442 4456666555555667767777776544 343321
Q ss_pred C---cceeE---EeccCCcCeEEEEEcc---CCCEEEEEeCCCeEEEEECCCCe-----EEEEeecCCCCCCCCCeEEEE
Q 010669 299 N---YDCKH---TLKDHTAEVQAVTVHA---TNKYFVTASLDNTWCFYDLSSGI-----CLTQVSDAGTDGRPEGYTSAA 364 (504)
Q Consensus 299 ~---~~~~~---~~~~h~~~v~~l~~~p---~~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~v~~~~ 364 (504)
. ...+. .+. ....|.++.... .+.+|+.++..|.++...+.... -+..+. ... ...+..+.
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~---L~~-~d~lv~v~ 156 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAIN---LDE-GDALVGVA 156 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSC---CCT-TCCEEEEE
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEE---eCC-CCEEEEEE
Confidence 1 01111 122 234566654432 45689999999999988764321 111121 112 23444455
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcC
Q 010669 365 FHPDGLILGTGTSEALVKIWDVK 387 (504)
Q Consensus 365 ~~pdg~~l~~g~~dg~I~iwd~~ 387 (504)
...+...++..+.+|.+..|+..
T Consensus 157 ~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 157 LTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp EECSCCEEEEEETTSEEEEEEGG
T ss_pred EeCCCceEEEEeCCCeEEEEEcc
Confidence 44555567777888988888753
No 474
>2qdq_A Talin-1; dimerisation domain, C-terminal actin binding site, ABS3, latch domain, structural protein; 2.20A {Mus musculus}
Probab=53.01 E-value=13 Score=23.33 Aligned_cols=25 Identities=40% Similarity=0.415 Sum_probs=19.7
Q ss_pred hhHHHHHHhcchhHHHHHHHHHhhh
Q 010669 111 ACRVIARLKKERDEARSLLAQSERQ 135 (504)
Q Consensus 111 a~rv~a~l~kErd~ar~~l~~~~~~ 135 (504)
|..-|-|+.+|..+||..|+.+...
T Consensus 13 Aqe~iLr~ErELEeAr~~La~iR~~ 37 (50)
T 2qdq_A 13 AQEEMLRKERELEEARKKLAQIRQQ 37 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678889999999999888765
No 475
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=51.93 E-value=41 Score=20.97 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=12.4
Q ss_pred HHHHhhhhhHHHHHHHHHHHh
Q 010669 82 GLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 82 a~~le~~~lr~~l~~~~~els 102 (504)
+|-.||-.||++|+.--.+|+
T Consensus 14 ~Lk~ENshLrrEL~dNS~~ls 34 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLT 34 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHH
Confidence 555666666666665555544
No 476
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=51.58 E-value=9.7 Score=25.64 Aligned_cols=12 Identities=33% Similarity=0.689 Sum_probs=7.6
Q ss_pred hhhHHHHHhhhh
Q 010669 78 NEWDGLMLSNFA 89 (504)
Q Consensus 78 ~Ewda~~le~~~ 89 (504)
|+||.+..||=+
T Consensus 1 n~WD~~LveNge 12 (64)
T 3t97_C 1 NAWDRTLIENGE 12 (64)
T ss_dssp --CTTHHHHHHH
T ss_pred ChHHHHHHHHHH
Confidence 689988777764
No 477
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=51.40 E-value=1.5e+02 Score=27.31 Aligned_cols=189 Identities=15% Similarity=0.098 Sum_probs=101.5
Q ss_pred CCEEEEEeCCCcEEEEcCCC-------CceEEEcc-cCccceeEEEEeeCCCEEEEEeCCCcEEE---EeCCCCC---Cc
Q 010669 235 KDVIATGGVDTNAVLFDRPS-------GQIVTTLS-GHSKKVTSVKFVTEGDLFLTGSADKTVRV---WQGSEDG---NY 300 (504)
Q Consensus 235 ~~~l~sg~~dg~i~vwd~~~-------~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~s~dg~i~i---wd~~~~~---~~ 300 (504)
..++++.+.+|.|+--.+.+ +.-+..+. ...+.+..+........|+.-+..|.+.- |++...+ ..
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 34677788888888554221 11111111 12344555555555556666666776543 4444321 01
Q ss_pred ceeEEe-c-cCCcCeEEEEEcc---CCCEEEEEeCCCeEEEEECCCCeE-----EEEeecCCCCCCCCCeEEEEECCCCC
Q 010669 301 DCKHTL-K-DHTAEVQAVTVHA---TNKYFVTASLDNTWCFYDLSSGIC-----LTQVSDAGTDGRPEGYTSAAFHPDGL 370 (504)
Q Consensus 301 ~~~~~~-~-~h~~~v~~l~~~p---~~~~l~s~s~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~pdg~ 370 (504)
..+..+ . .....|.++..-+ +..+++.++.+|.++...+..-.. ...+. ... ...+..+.......
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~---lke-~D~lv~~~~~~~~d 158 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVN---LRD-NDELVGAVLCSAGD 158 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCB---CCT-TCCEEEEEEECTTC
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEE---ECC-CCEEEEEEEecCCC
Confidence 111111 1 1234566554433 577999999999999987654221 11111 112 23455554444556
Q ss_pred EEEEEeCCCcEEEEEcC--CC---------ceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcC
Q 010669 371 ILGTGTSEALVKIWDVK--SQ---------ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428 (504)
Q Consensus 371 ~l~~g~~dg~I~iwd~~--~~---------~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~ 428 (504)
.++..+..|.+..+... .- .....+. ....|..+...+++.+|+..+..| ++.-.+.
T Consensus 159 ~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 159 DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 67777888988887765 21 1122232 234577766666666788888888 7777654
No 478
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=51.30 E-value=60 Score=22.74 Aligned_cols=38 Identities=11% Similarity=0.068 Sum_probs=23.5
Q ss_pred CCCChhhHHHhhhhhhH---HHHHhhhhhHHHHHHHHHHHh
Q 010669 65 TAASIPGMLGMFQNEWD---GLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 65 ~~~sip~ll~~~q~Ewd---a~~le~~~lr~~l~~~~~els 102 (504)
+...+-.|.+.||.|.- .++-|.-..|-.+..+..+|-
T Consensus 8 ~~~~~leLQSALeaEIqAKQ~i~EELs~vr~~ni~~eskL~ 48 (81)
T 1wt6_A 8 AEVTLRELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLR 48 (81)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788999999985 455555555555555555443
No 479
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.60 E-value=36 Score=37.83 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=31.7
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 010669 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVS 349 (504)
Q Consensus 312 ~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 349 (504)
.+.+++..++..++++-+.|+++++|++.+++++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666778899999999999999999999988765
No 480
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=50.06 E-value=27 Score=31.04 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=36.8
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhhh
Q 010669 78 NEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQ 135 (504)
Q Consensus 78 ~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~~ 135 (504)
.||+++..|.-.+++....+..++-..+.+.++....++.+..+..+.+..|...+..
T Consensus 90 kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~ 147 (256)
T 3na7_A 90 RELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESL 147 (256)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777777777777777776666666666666666666666655555555544433
No 481
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=49.96 E-value=13 Score=24.93 Aligned_cols=30 Identities=13% Similarity=0.370 Sum_probs=15.9
Q ss_pred HHhhhhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 73 LGMFQNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 73 l~~~q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
+..|+.+...|-.||-.|+.+++.++++|.
T Consensus 32 ~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 32 MKQLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555555555566666666665555543
No 482
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.98 E-value=71 Score=33.08 Aligned_cols=37 Identities=11% Similarity=0.189 Sum_probs=30.0
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q 010669 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350 (504)
Q Consensus 312 ~v~~l~~~p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 350 (504)
.|.++.+ +..++++-+.|.++++||+.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555444 478999999999999999999998877764
No 483
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=46.59 E-value=30 Score=25.06 Aligned_cols=38 Identities=32% Similarity=0.317 Sum_probs=23.3
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHH
Q 010669 81 DGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQS 132 (504)
Q Consensus 81 da~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~ 132 (504)
+.|--|+-.|..+++.+++|++ ++.+|+|..+..+..|
T Consensus 51 ~~LE~e~~~L~~e~~~L~~e~~--------------~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 51 HHLENEKTQLIQQVEQLKQEVS--------------RLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHh
Confidence 3444455566666666666654 4667777777666544
No 484
>2lq4_p Lysophosphatidic acid receptor 1; GPCR, G protein-coupled receptor, de novo protein; NMR {Artificial gene}
Probab=46.21 E-value=5.7 Score=25.85 Aligned_cols=23 Identities=43% Similarity=0.673 Sum_probs=13.5
Q ss_pred hhhhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 75 MFQNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 75 ~~q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
.-||||+-- .|+++|.++.+||-
T Consensus 8 laqnewelq-----alekelaqlekelq 30 (80)
T 2lq4_p 8 LAQNEWELQ-----ALEKELAQLEKELQ 30 (80)
T ss_dssp HSSSSTTTH-----HHHTTHHHHHHHHT
T ss_pred HHHhHHHHH-----HHHHHHHHHHHHHH
Confidence 358899633 34455666666653
No 485
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=45.51 E-value=1.8e+02 Score=26.50 Aligned_cols=189 Identities=9% Similarity=0.058 Sum_probs=106.2
Q ss_pred cCCCEEEEEeCCCcEEEEcCCCCc-------eEE--EcccCccceeEEEEeeCCCEEEEEeCCCcEEEEeCCC---CCC-
Q 010669 233 YSKDVIATGGVDTNAVLFDRPSGQ-------IVT--TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE---DGN- 299 (504)
Q Consensus 233 ~~~~~l~sg~~dg~i~vwd~~~~~-------~~~--~~~~h~~~v~~l~~s~~~~~l~s~s~dg~i~iwd~~~---~~~- 299 (504)
++..++++.+.+|.|+-..+...+ -+. .++. .+.+..+........++..+..|.++-+.... .+.
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 456788889999999877543221 111 1222 23455555555566777778888876665432 100
Q ss_pred --cce---eEEeccCCcCeEEEEEcc---CCCEEEEEeCCCeEEEEECCCCe-----EEEEeecCCCCCCCCCeEEEEEC
Q 010669 300 --YDC---KHTLKDHTAEVQAVTVHA---TNKYFVTASLDNTWCFYDLSSGI-----CLTQVSDAGTDGRPEGYTSAAFH 366 (504)
Q Consensus 300 --~~~---~~~~~~h~~~v~~l~~~p---~~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~ 366 (504)
... ...+. ....|.++...+ ++.+++..+..|.++...+..-. -...+. ... ...+..+...
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~---L~~-~d~lv~~~~~ 159 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIK---LND-KDFVTSAEIV 159 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBC---CCT-TCCEEEEEEE
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEe---cCC-CCEEEEEEEe
Confidence 000 11122 224455554433 46788899999999988774321 111121 212 3455555555
Q ss_pred CCCCEEEEEeCCCcEEEEEcCC---------CceeeeeeCCCCCeEEEEEcCCCcEEEEEeCCc-EEEEEcC
Q 010669 367 PDGLILGTGTSEALVKIWDVKS---------QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428 (504)
Q Consensus 367 pdg~~l~~g~~dg~I~iwd~~~---------~~~~~~~~~~~~~i~~l~~s~~g~~l~s~~~d~-v~vwd~~ 428 (504)
.++..++..+.+|.+..+.... |.....+.. ...|..+....++..+++.+..| .+.+++.
T Consensus 160 ~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 160 FKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 5556777888999998888743 112222332 34566665555566677778777 7777764
No 486
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=44.16 E-value=2.9e+02 Score=28.62 Aligned_cols=252 Identities=13% Similarity=0.138 Sum_probs=121.6
Q ss_pred CeEEEEeccCC-CEEEEEeCCCcEEEEcCCCCceEEEcccC-------ccceeEEEEee-CCCEEEEEeCC-------Cc
Q 010669 225 GIVSLDIHYSK-DVIATGGVDTNAVLFDRPSGQIVTTLSGH-------SKKVTSVKFVT-EGDLFLTGSAD-------KT 288 (504)
Q Consensus 225 ~I~~~~~s~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~s~-~~~~l~s~s~d-------g~ 288 (504)
.|..|+++|.. +.+.++...|.|+.++ ..++.-..+..+ ...|.+|+++| +.+.++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 68999999964 4566666566665554 234444444322 24589999998 43444444321 12
Q ss_pred EEEEeCC-CCCCcceeEEe-c--cC---CcCeEEEEEccCC-CEEEEEeCC-CeEEEEECCCCeEEEEeecCCC------
Q 010669 289 VRVWQGS-EDGNYDCKHTL-K--DH---TAEVQAVTVHATN-KYFVTASLD-NTWCFYDLSSGICLTQVSDAGT------ 353 (504)
Q Consensus 289 i~iwd~~-~~~~~~~~~~~-~--~h---~~~v~~l~~~p~~-~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~~------ 353 (504)
..||.-. .+..+..+..- . .+ ...+..|+++|.. +.++.+... +.|. ...+.++....+.....
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~-~S~DgG~tW~~~~~~~~~~~~~~ 181 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLW-RSTDYGVTWSKVESFPNPGTYIY 181 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEE-EESSTTSSCEECTTCCCCCCCBS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEE-EeCCCCcceecccCCCCCccccc
Confidence 4455443 33445443321 0 00 0124678898854 566666533 2222 23333333332221000
Q ss_pred ------CCCCCCeEEEEECCCC-------CEEEEEeCCCcEEEEEcCC-CceeeeeeCC-CCC-eEEEEEcCCCcEEEEE
Q 010669 354 ------DGRPEGYTSAAFHPDG-------LILGTGTSEALVKIWDVKS-QANVAKFDGH-VGA-VTAISFSENGYYLATA 417 (504)
Q Consensus 354 ------~~~~~~v~~~~~~pdg-------~~l~~g~~dg~I~iwd~~~-~~~~~~~~~~-~~~-i~~l~~s~~g~~l~s~ 417 (504)
......+..+.++|.. ..+.++..++.-.||-... ++.-..+.+. ... ...+.++|++.++++.
T Consensus 182 ~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 182 DPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp CTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEE
T ss_pred CcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEe
Confidence 0112347778888743 2455555454222343322 3322222211 111 2456678777666654
Q ss_pred eC---------Cc-EEEEEcCCCcceeeeecCCC-----CCCeeEEEECCCC-CEEEEEeCc-----EEEEEeeccCccc
Q 010669 418 AH---------DG-VKLWDLRKLKNFRSFESSDS-----ETPTNSVDFDHSG-SYLAVASAD-----IRVYQVASVKADW 476 (504)
Q Consensus 418 ~~---------d~-v~vwd~~~~~~~~~~~~~~~-----~~~v~~i~~~~~g-~~l~~~~~d-----i~vw~~~~~~~~~ 476 (504)
.. .+ |...+-. +.....+..... ......|+++|.. ..|++++.+ ..||.-....++|
T Consensus 262 ~d~~g~y~~~~~g~v~~s~d~-G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~S~DgG~tW 340 (737)
T 2cn3_A 262 GDTCGPYDGNGKGQVWKFNTR-TGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFRSTDGGATW 340 (737)
T ss_dssp ESSCCSSCCSCCEEEEEEETT-TCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEEEESSTTSSC
T ss_pred cCCCCccccccCceEEEEeCC-CCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEEEeCCCCccc
Confidence 32 22 4444422 222222221110 0113458888853 455555433 5677776667788
Q ss_pred eeE
Q 010669 477 NCI 479 (504)
Q Consensus 477 ~~i 479 (504)
+.+
T Consensus 341 ~~~ 343 (737)
T 2cn3_A 341 KNI 343 (737)
T ss_dssp EES
T ss_pred cch
Confidence 877
No 487
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=43.93 E-value=31 Score=22.99 Aligned_cols=30 Identities=23% Similarity=0.165 Sum_probs=22.3
Q ss_pred HHhhhhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 73 LGMFQNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 73 l~~~q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
...||.+.+.|--||-.|+.++..+++|+.
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~ 54 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLKEKE 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888888888887777776654
No 488
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=43.09 E-value=42 Score=22.06 Aligned_cols=43 Identities=19% Similarity=0.023 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHH
Q 010669 88 FALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLA 130 (504)
Q Consensus 88 ~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~ 130 (504)
..|+.+|.+++++....+-.+..-..|-.+|..|....|.-|+
T Consensus 10 ~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIatYRkLLE 52 (59)
T 1gk6_A 10 EELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLLE 52 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3577888888988888888888888888889999888888775
No 489
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=42.77 E-value=24 Score=24.20 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=17.6
Q ss_pred HhhhhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 74 GMFQNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 74 ~~~q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
..|+.+-+.+..|+..|+.++..++.||.
T Consensus 39 ~~le~~~~~l~~en~~Lr~~i~~L~~El~ 67 (70)
T 1gd2_E 39 VTLKELHSSTTLENDQLRQKVRQLEEELR 67 (70)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555566666666666666666653
No 490
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=42.16 E-value=78 Score=23.91 Aligned_cols=24 Identities=17% Similarity=0.173 Sum_probs=20.2
Q ss_pred hhhhHHHHHhhhhhHHHHHHHHHH
Q 010669 77 QNEWDGLMLSNFALEQQLHTARQE 100 (504)
Q Consensus 77 q~Ewda~~le~~~lr~~l~~~~~e 100 (504)
.++||.|..+.-+|+++|..++.+
T Consensus 5 ~~~~~~lq~~~~ql~~qL~k~~~~ 28 (112)
T 1x79_B 5 RDQVKKLQLMLRQANDQLEKTMKD 28 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999887743
No 491
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=41.84 E-value=23 Score=30.75 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=20.5
Q ss_pred HHHhhhhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 72 MLGMFQNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 72 ll~~~q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
+...++.-+.++--+...|++.|++++.|..
T Consensus 165 Ik~yLa~R~~~lK~kl~~l~~~L~~~~~e~~ 195 (228)
T 3q0x_A 165 VKQFLAFRLSEVKGTCHDLSDDLSRTRDDRD 195 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666667777777777776643
No 492
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=41.73 E-value=17 Score=28.01 Aligned_cols=52 Identities=15% Similarity=0.186 Sum_probs=41.1
Q ss_pred CccccCCCCCC---CceEeCCCCeeeeHHHHHHHHHhcCCCCCCCCCCCCCccccc
Q 010669 1 MNCSISGEVPE---EPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPI 53 (504)
Q Consensus 1 ~~c~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 53 (504)
|.|..++.+.. ..++. +.|..|++..-.+.+...|+|-.++++++..+++..
T Consensus 33 F~C~~C~~~L~~~~~~~~~-~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~~~~~ 87 (122)
T 1m3v_A 33 LKCSSCQAQLGDIGTSSYT-KSGMILCRNDYIRLFGNSGAGGSGGHMGSGGDVMVV 87 (122)
T ss_dssp HCCSSSCCCTTTSEECCEE-ETTEEECHHHHHHHHCCCCSSSCSSCCSCCEESSSS
T ss_pred CCcCCCCCcccccCCeEEE-ECCeeecHHHHHHHcCCCCccccCCCCcCchheEEc
Confidence 45888888875 45776 689999999988888777789999999887776543
No 493
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=41.70 E-value=18 Score=26.22 Aligned_cols=66 Identities=11% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCCChhhHHHhhhhhhHHHHHhhhhhHHHHH--------HHHH---HHhHhhhcccchhHHHHHHhcchhHHHHHHHHHh
Q 010669 65 TAASIPGMLGMFQNEWDGLMLSNFALEQQLH--------TARQ---ELSHALYQHDAACRVIARLKKERDEARSLLAQSE 133 (504)
Q Consensus 65 ~~~sip~ll~~~q~Ewda~~le~~~lr~~l~--------~~~~---els~aly~~daa~rv~a~l~kErd~ar~~l~~~~ 133 (504)
+.+-+--||..+..|||++.-|....+.|-. +--+ ..-+++|+-..+-+.+ ++.+.++++.|.
T Consensus 8 ~~~Rl~ELLD~ir~Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~km------Kq~YEeEI~rLr 81 (92)
T 3vp9_A 8 TQNKLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYERELTHRKM------KDAYEEEIKHLK 81 (92)
T ss_dssp ---------CCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 4457778999999999988877655543322 1112 2235677766664444 334444455554
Q ss_pred hhc
Q 010669 134 RQI 136 (504)
Q Consensus 134 ~~~ 136 (504)
.++
T Consensus 82 ~eL 84 (92)
T 3vp9_A 82 LGL 84 (92)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 494
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=41.39 E-value=53 Score=25.13 Aligned_cols=60 Identities=23% Similarity=0.277 Sum_probs=32.3
Q ss_pred CCCChhhHHHhhhhhhHHHHHhhhhhHHHHHHHHHHHhHhhhcccchhHHHHHHhcchhHHHHHHHHHhh
Q 010669 65 TAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSER 134 (504)
Q Consensus 65 ~~~sip~ll~~~q~Ewda~~le~~~lr~~l~~~~~els~aly~~daa~rv~a~l~kErd~ar~~l~~~~~ 134 (504)
.++||-+-|..|..|++.|+-+--+ .+.+.+++ .++|.+..|...+-+....+.+++++.
T Consensus 3 ~a~~i~~~l~~Leae~q~L~~~E~q---ry~~eka~-------AE~A~~~La~~~~l~~~i~er~~~i~~ 62 (119)
T 3etw_A 3 DAASLVGELQALDAEYQNLANQEEA---RFNEERAQ-------ADAARQALAQNEQVYNELSQRAQRLQA 62 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777788888888776542211 11111111 235555666666666666666666554
No 495
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=40.96 E-value=7.6 Score=36.04 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=27.0
Q ss_pred ccccCCCCCCC----c---eEeCCCCeeeeHHHHHHHHHhcC
Q 010669 2 NCSISGEVPEE----P---VVSKNSGLLFEKRLIERHILDYG 36 (504)
Q Consensus 2 ~c~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~ 36 (504)
-|+||-+...+ | .-.++|||.|=..||.+|++..+
T Consensus 310 ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~ 351 (381)
T 3k1l_B 310 RCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLM 351 (381)
T ss_dssp SCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHH
T ss_pred cCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCC
Confidence 49998665444 3 33568999999999999999653
No 496
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=40.87 E-value=20 Score=26.39 Aligned_cols=31 Identities=6% Similarity=0.226 Sum_probs=25.3
Q ss_pred CccccCCCC-CCCceEe-CCCCeeeeHHHHHHH
Q 010669 1 MNCSISGEV-PEEPVVS-KNSGLLFEKRLIERH 31 (504)
Q Consensus 1 ~~c~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 31 (504)
+.|.|+.+. +.+||.+ ..+|+.|.+.+++.+
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHHHH
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCHHH
Confidence 369999865 7788874 569999999999983
No 497
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=40.48 E-value=56 Score=28.66 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=13.4
Q ss_pred hhhhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 75 MFQNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 75 ~~q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
.++.+|+.+.-+.-.|..++..++.++.
T Consensus 10 ~l~~~~~~~~~~~~~l~~~l~~l~~~~~ 37 (284)
T 1c1g_A 10 MLKLDKENALDRADEAEADKKAAEDRSK 37 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555554444444444444444433
No 498
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=39.78 E-value=38 Score=20.72 Aligned_cols=27 Identities=11% Similarity=0.314 Sum_probs=14.8
Q ss_pred hhHHHHHhhh-hhHHHHHHHHHHHhHhh
Q 010669 79 EWDGLMLSNF-ALEQQLHTARQELSHAL 105 (504)
Q Consensus 79 Ewda~~le~~-~lr~~l~~~~~els~al 105 (504)
+.|++-.|.. ++|++++++++|.-.|+
T Consensus 8 dle~~KqEIL~E~RkElqK~K~EIIeAi 35 (45)
T 1use_A 8 DLQRVKQELLEEVKKELQKVKEEIIEAF 35 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444 56667777666655443
No 499
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=39.30 E-value=32 Score=24.14 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=14.5
Q ss_pred hhhhHHHHHhhhhhHHHHHHHHHHHh
Q 010669 77 QNEWDGLMLSNFALEQQLHTARQELS 102 (504)
Q Consensus 77 q~Ewda~~le~~~lr~~l~~~~~els 102 (504)
+.+...|--||..|+.++.++++|+.
T Consensus 42 ~~r~~~L~~eN~~L~~~v~~L~~E~~ 67 (78)
T 1gu4_A 42 QHKVLELTAENERLQKKVEQLSRELS 67 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555566666666666665554
No 500
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=39.27 E-value=18 Score=23.45 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=10.7
Q ss_pred hhhhhHHHHHhhhhhHHHHHHHHHH
Q 010669 76 FQNEWDGLMLSNFALEQQLHTARQE 100 (504)
Q Consensus 76 ~q~Ewda~~le~~~lr~~l~~~~~e 100 (504)
|+.+-..|.-||-.|+.++..++++
T Consensus 27 LE~~v~~L~~eN~~L~~~~~~L~~~ 51 (55)
T 1dh3_A 27 LENRVAVLENQNKTLIEELKALKDL 51 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334344444444444444444433
Done!