BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010671
(504 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZ11|GLPQ2_ARATH Probable glycerophosphoryl diester phosphodiesterase 2
OS=Arabidopsis thaliana GN=GPDL2 PE=1 SV=3
Length = 759
Score = 589 bits (1518), Expect = e-167, Method: Compositional matrix adjust.
Identities = 275/451 (60%), Positives = 353/451 (78%), Gaps = 8/451 (1%)
Query: 55 GLLLVSALVVLHCGVI------AQVSAQGSNATSRWQTLTGDPPFVVARGGFSGIFPDSS 108
GLL S+L L CGVI AQ+ AQ S W TLTGDPP V+ARGGFSG+FPDSS
Sbjct: 3 GLLRASSL--LLCGVILIQLLAAQIHAQSKKPKSPWPTLTGDPPLVIARGGFSGLFPDSS 60
Query: 109 SIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168
AY+ ++TS P +LWCDVQLTKD GICFPDL + N+S+I ++ T+QK+Y VNGVP
Sbjct: 61 YDAYNFAILTSVPDAVLWCDVQLTKDALGICFPDLTMRNSSSIEAVYPTRQKSYPVNGVP 120
Query: 169 TPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDA 228
T GWF+ID++L DL ++ L +G+ SR++KFDGN I+TVQ ++ Q+KP WLN+QHDA
Sbjct: 121 TSGWFTIDFSLKDLKDVNLIRGILSRSEKFDGNSNPIMTVQSVSTQMKPSFFWLNVQHDA 180
Query: 229 FYAQHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPT 288
FYAQHNLSM SF+++ S++V++++ISSPEVNF + IA RF + LVFRFLG+ E EPT
Sbjct: 181 FYAQHNLSMSSFLVAASKTVLIDFISSPEVNFFKKIAGRFGRNGPSLVFRFLGQDEFEPT 240
Query: 289 TNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNF 348
TN+TYGS+L NLTF+KTFASGILVPK YI P+D+ YLLPHT++V DAHK LEVF S F
Sbjct: 241 TNRTYGSILSNLTFVKTFASGILVPKSYILPLDDQQYLLPHTSLVQDAHKAGLEVFVSGF 300
Query: 349 ANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408
ANDI I+ +YS+DP++EYLSF+DNG+FSVDGVLSDFP+T SA++DCF+H+G+NA+K +
Sbjct: 301 ANDIDIAHDYSFDPVSEYLSFVDNGNFSVDGVLSDFPITASASLDCFSHVGRNATKQVDF 360
Query: 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQS 468
LVI+K+GASGDYP CT+LAY+KAI DG D IDC VQ+S DG PFCLS I+L NST + +
Sbjct: 361 LVITKDGASGDYPGCTDLAYKKAIKDGADVIDCSVQLSSDGTPFCLSSIDLGNSTTVSLT 420
Query: 469 KFNSITTTIPEIMAGSGIFSFSLIWDEIQTL 499
F + +TT+PE+ + I++FSL W EIQTL
Sbjct: 421 AFRNRSTTVPELGSLGAIYTFSLTWAEIQTL 451
>sp|Q9FJ62|GLPQ1_ARATH Probable glycerophosphoryl diester phosphodiesterase 1
OS=Arabidopsis thaliana GN=GPDL1 PE=1 SV=1
Length = 766
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/457 (60%), Positives = 343/457 (75%), Gaps = 6/457 (1%)
Query: 48 MCNTR---ALGLLLVSALVVLHCGVIAQVSAQ--GSNATSRWQTLTGDPPFVVARGGFSG 102
M N R + +L S + L +I +S Q + S WQTLTGD P V+ARGGFSG
Sbjct: 1 MINMRDNPTMHVLQASKFLFLALILIQLLSTQLFAQRSKSPWQTLTGDAPLVIARGGFSG 60
Query: 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNY 162
+ PDSS AYS TS P +LWCDVQLTKD G+CFPD+K+ NASNI ++ ++ +Y
Sbjct: 61 LLPDSSLDAYSFVSQTSVPGAVLWCDVQLTKDAIGLCFPDVKMMNASNIQDVYPKRKTSY 120
Query: 163 LVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWL 222
L+NGVPT WF+ID+ DL+ +IL QG+ SR+ FDGN + I TV+D++ Q+KP G WL
Sbjct: 121 LLNGVPTQDWFTIDFNFKDLTKVILKQGILSRSAAFDGNSYGISTVKDISTQLKPEGFWL 180
Query: 223 NIQHDAFYAQHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGK 282
N+QHDAFYAQHNLSM SF+LS+S++V+++Y+SSPEVNF R+I RF + K VFRFL K
Sbjct: 181 NVQHDAFYAQHNLSMSSFLLSISKTVIIDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEK 240
Query: 283 SEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLE 342
++E +TNQTYGSL NLTF+KTFASG+LVPK YIWP+ ES YLLP T+ V DAHK LE
Sbjct: 241 DDVEVSTNQTYGSLAGNLTFLKTFASGVLVPKSYIWPI-ESQYLLPRTSFVQDAHKAGLE 299
Query: 343 VFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNA 402
V+AS F ND +++NYS+DPL EYLSF+DNGDFSVDG+LSDFPLT S+AVDCF+HLG NA
Sbjct: 300 VYASGFGNDFDLAYNYSFDPLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGSNA 359
Query: 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINS 462
S + LVISKNGASGDYP CT+LAY KAI DG D IDC +QMS DG+PFCLS INL S
Sbjct: 360 SSQVDFLVISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINLGES 419
Query: 463 TNAAQSKFNSITTTIPEIMAGSGIFSFSLIWDEIQTL 499
TN QS F + +TT+PEI + GI+SFSL W EIQTL
Sbjct: 420 TNVVQSPFRNRSTTVPEIGSLPGIYSFSLAWSEIQTL 456
>sp|Q7Y208|GLPQ3_ARATH Probable glycerophosphoryl diester phosphodiesterase 3
OS=Arabidopsis thaliana GN=GPDL3 PE=1 SV=2
Length = 763
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/449 (60%), Positives = 345/449 (76%), Gaps = 8/449 (1%)
Query: 57 LLVSALVVLHCGVI------AQVSAQGSNATSRWQTLTGDPPFVVARGGFSGIFPDSSSI 110
L++ + +L CGV+ AQ+ AQ S TSRWQTL GD P V+ARGGFSG++PDSS
Sbjct: 11 LVIRSSTLLFCGVVLIHLFAAQIDAQRS--TSRWQTLNGDAPLVIARGGFSGLYPDSSIA 68
Query: 111 AYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170
AY L +TS V+LWCD+QLTKD GICFPDL L NAS I +++ ++K+Y VNGV T
Sbjct: 69 AYQLATLTSVADVVLWCDLQLTKDGLGICFPDLNLANASTIDRVYPNREKSYSVNGVTTK 128
Query: 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFY 230
GWF D++L +L N +L +G+ SRTD+FDGNG+ I T++D+ + G WLN+QHDAFY
Sbjct: 129 GWFPNDFSLTELQNFLLIRGILSRTDRFDGNGYLISTIEDVVTTLNREGFWLNVQHDAFY 188
Query: 231 AQHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTN 290
Q NLSM SF+LSVSR+V +++ISSPEVNF + I F + VF+FLGK + EPTTN
Sbjct: 189 EQQNLSMSSFLLSVSRTVSIDFISSPEVNFFKKITGSFGRNGPTFVFQFLGKEDFEPTTN 248
Query: 291 QTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAN 350
+TYGS+L NLTF+KTFASGILVPK YI P+D+ YL+PHT++V DAHK L+V+ S FAN
Sbjct: 249 RTYGSILSNLTFVKTFASGILVPKSYILPLDDEQYLVPHTSLVQDAHKAGLQVYVSGFAN 308
Query: 351 DIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLLV 410
D+ I++NYS DP++EYLSF+DNGDFSVDGVLSDFP+T SAAVDCF+H+G+NA+K + LV
Sbjct: 309 DVDIAYNYSSDPVSEYLSFVDNGDFSVDGVLSDFPITASAAVDCFSHIGRNATKQVDFLV 368
Query: 411 ISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKF 470
ISK+GASGDYP CT+LAY+KAI DG D IDC VQMS DGVPFCL I+L NS A Q+ F
Sbjct: 369 ISKDGASGDYPGCTDLAYEKAIKDGADVIDCSVQMSSDGVPFCLRSIDLRNSIAALQNTF 428
Query: 471 NSITTTIPEIMAGSGIFSFSLIWDEIQTL 499
++ +T++PEI + GIF+FSL W EIQ+L
Sbjct: 429 SNRSTSVPEISSVPGIFTFSLTWPEIQSL 457
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 140/324 (43%), Gaps = 30/324 (9%)
Query: 77 GSNATSRWQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEA 136
G NAT + L V+++ G SG +P + +AY + A ++ C VQ++ D
Sbjct: 357 GRNATKQVDFL------VISKDGASGDYPGCTDLAYEKAIKDGAD--VIDCSVQMSSDGV 408
Query: 137 GICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYT---LNDLSNIILNQGVYS 193
C + L N+ Q + + + PG F+ T + L+ I N
Sbjct: 409 PFCLRSIDLRNSIAALQNTFSNRSTSVPEISSVPGIFTFSLTWPEIQSLTPAISNPFRVY 468
Query: 194 R-----TDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRS 247
R +K G + D+A+ G+ +++++ A+ + L V ++
Sbjct: 469 RIFRNPREKNSGKLISLSQFLDLAKTYTSLSGVLISVENAAYLREKQ------GLDVVQA 522
Query: 248 VVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPT--TNQTYGSLLKN-LTFIK 304
V+ + N + + + + ++ F +S+ E +T G++ + + IK
Sbjct: 523 VLDTLTEAGYSNGTTTTKVMIQSTNSSVLVDFKKQSKYETVYKIEETIGNIRDSAIEDIK 582
Query: 305 TFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPL 363
FA+ +++ KD ++P +S +L T +V K +L V+ F N+ + ++++ D
Sbjct: 583 KFANAVVINKDSVFPNSDS-FLTGQTNVVERLQKSQLPVYVELFRNEFVSQAYDFFSDAT 641
Query: 364 TEYLSFIDNGDFSVDGVLSDFPLT 387
E ++I ++G +++FP T
Sbjct: 642 VEINAYIYGA--GINGTITEFPFT 663
>sp|P96236|GLPQ1_MYCTU Probable glycerophosphoryl diester phosphodiesterase 1
OS=Mycobacterium tuberculosis GN=glpQ1 PE=2 SV=3
Length = 274
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNI 151
PFVVA G S P+ + AY L L A V CDV+LT+D +C D +LD S
Sbjct: 12 PFVVAHRGASAARPEHTLAAYDLALKEGADGVE--CDVRLTRDGHLVCVHDRRLDRTSTG 69
Query: 152 AQIFKT 157
A + T
Sbjct: 70 AGLVST 75
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAA 466
V++ GAS P T AY A+ +G D ++C V++++DG C+ L ++ A
Sbjct: 14 VVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTSTGA 70
>sp|P54527|YQIK_BACSU Uncharacterized protein YqiK OS=Bacillus subtilis (strain 168)
GN=yqiK PE=4 SV=2
Length = 243
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDG 449
+ + GASG +P T LA++K I G D I+ VQ++KDG
Sbjct: 4 IFAHRGASGQFPENTMLAFEKGIEAGADGIELDVQLTKDG 43
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ 153
+ A G SG FP+++ +A+ + A + L DVQLTKD + D +L+ +++
Sbjct: 4 IFAHRGASGQFPENTMLAFEKGIEAGADGIEL--DVQLTKDGRIVVIHDERLNRTTSLKG 61
Query: 154 IFK 156
K
Sbjct: 62 FVK 64
>sp|P37965|GLPQ_BACSU Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis
(strain 168) GN=glpQ PE=3 SV=1
Length = 293
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAA 466
+L ++ GASG P T L+Y+ A DFI+ +QM+KDG + L +TN
Sbjct: 37 RILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGKLIVMHDEKLDRTTNGM 96
Query: 467 QSKFNSITTTIPEIMAGS 484
+ I ++ AGS
Sbjct: 97 GWVKDHTLADIKKLDAGS 114
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 59 VSALVVLHCGVIAQVSAQGSNATSRWQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLIT 118
+ AL VL G+++ + S A S+ L+ D VA G SG P+ + ++Y
Sbjct: 6 ILALFVLSLGLLSFMVTPVS-AASKGNLLSPDRILTVAHRGASGYVPEHTILSYETAQKM 64
Query: 119 SAPSVILWCDVQLTKDEAGICFPDLKLDNASN 150
A + L D+Q+TKD I D KLD +N
Sbjct: 65 KADFIEL--DLQMTKDGKLIVMHDEKLDRTTN 94
>sp|O14169|PGC1_SCHPO Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4D7.02c PE=3 SV=2
Length = 311
Score = 39.7 bits (91), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459
LVI+ G YP T LA+Q+A+ G D ++ V+++KD V L NL
Sbjct: 33 LVIAHRGYKAKYPENTILAFQQAVKAGADCVETDVRLTKDEVVCILHDRNL 83
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASN 150
PP V+A G+ +P+++ +A+ + A V DV+LTKDE D L+
Sbjct: 31 PPLVIAHRGYKAKYPENTILAFQQAVKAGADCVE--TDVRLTKDEVVCILHDRNLNRVFG 88
Query: 151 I 151
+
Sbjct: 89 V 89
>sp|O30405|GLPQ_TREPA Glycerophosphoryl diester phosphodiesterase OS=Treponema pallidum
(strain Nichols) GN=glpQ PE=3 SV=1
Length = 356
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 63/336 (18%)
Query: 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ 153
+VA G +G P+ + + L A L DV L+KD I LDN +++A+
Sbjct: 27 IVAYRGAAGYVPEHTFASKVLAFAQGAD--YLQQDVVLSKDNQLIVAQSHILDNMTDVAE 84
Query: 154 IFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFD----------GNGF 203
F +Q+ +G ++ ID+T+ +LS + Y+R + GF
Sbjct: 85 KFPRRQR---ADG----HFYVIDFTVEELSLLRATNSFYTRGKRHTPVYGQRFPLWKPGF 137
Query: 204 QILTVQDMARQI--------KPPGLWLNIQHDAFYAQHNLSMRSFVLSV-------SRSV 248
++ T ++ + I K G++ I+ F+ Q + + L++ SRS
Sbjct: 138 RLHTFEEELQFIRGLEQTTGKKIGIYSEIKVPWFHHQEGKDIAALTLALLKKYGYQSRSD 197
Query: 249 VVNYISSPEVNFLRSIAARFRPSM---TKLVFRFLGKSEIEPTTNQTYGSLLK---NLTF 302
+V Y+ + + N L+ I P KL+ R + E + G + N F
Sbjct: 198 LV-YVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQEKDSRGKWINYNYNWMF 256
Query: 303 -------IKTFASGI------LVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFA 349
I +A G+ L+ + W ++ L P + + DA +LE
Sbjct: 257 EPGGMQKIAKYADGVGPDWRMLIENE--WSKVGAVRLSPMVSAIQDA---KLECHVHTVR 311
Query: 350 NDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385
+ S+ + D + L F G + VL+DFP
Sbjct: 312 KETLPSYARTMDEMFSIL-FKQTG---ANVVLTDFP 343
>sp|Q50687|Y2277_MYCTU Uncharacterized protein Rv2277c/MT2337 OS=Mycobacterium
tuberculosis GN=Rv2277c PE=4 SV=1
Length = 301
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQS 468
++++ + D+P T LA A++ GVD + VQ+S DGVP +L T+ A
Sbjct: 32 MIVAHRAGTRDFPENTVLAITNAVAAGVDGMWLTVQVSSDGVPVLYRPSDLATLTDGAGP 91
Query: 469 KFNSITTTIPEIMAG 483
+ + ++ AG
Sbjct: 92 VNSKTVQQLQQLNAG 106
>sp|P47625|Y385_MYCGE Uncharacterized protein MG385 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG385 PE=4 SV=1
Length = 236
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASN 150
F++A G+S I P+++ +A+ + + W D+QLTKD+
Sbjct: 3 KQFLIAYRGYSSIAPENTKLAFQAAQVFDFDGI--WIDIQLTKDK--------------- 45
Query: 151 IAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQD 210
QI T ++N+ V+ + LN ++ + L + + K QI T+++
Sbjct: 46 --QIVVTHKENFKVSNK--------NLNLNQINLVDLKKVNLASEFKLKVTSQQIQTLKE 95
Query: 211 MARQIKPPGLWLNIQ-------HDAFYAQHNLSMRSFVLSVSRSVVV 250
+ Q P +L I +++ Q NL + FVL+ + +++
Sbjct: 96 VLTQFIQPFKYLLIHIKDDKENNNSLLEQLNLLCKDFVLAKEKMILL 142
>sp|Q5HR07|53DR_STAEQ Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0388 PE=3 SV=1
Length = 179
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG--- 379
+L ++PH V+ E +++ + A D+P SF+ Y+ L EY F+D F G
Sbjct: 66 NLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN 125
Query: 380 -VLSDF 384
+L+D+
Sbjct: 126 IILADY 131
>sp|Q8CTG7|53DR_STAES Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_0505 PE=1 SV=1
Length = 179
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG--- 379
+L ++PH V+ E +++ + A D+P SF+ Y+ L EY F+D F G
Sbjct: 66 NLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN 125
Query: 380 -VLSDF 384
+L+D+
Sbjct: 126 IILADY 131
>sp|P09394|GLPQ_ECOLI Glycerophosphoryl diester phosphodiesterase OS=Escherichia coli
(strain K12) GN=glpQ PE=1 SV=2
Length = 358
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ 153
V+A G SG P+ + A ++ A L D+ +TKD+ + D LD +++A
Sbjct: 33 VIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDNLVVLHDHYLDRVTDVAD 90
Query: 154 IFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQG 190
F + + +++ID+TL+++ ++ +G
Sbjct: 91 RFPDRARK-------DGRYYAIDFTLDEIKSLKFTEG 120
>sp|O07592|YHDW_BACSU Putative glycerophosphoryl diester phosphodiesterase YhdW
OS=Bacillus subtilis (strain 168) GN=yhdW PE=3 SV=1
Length = 243
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASN 150
+++A G SG P+++ A+ L + +A + L DVQLTKD + D ++D +N
Sbjct: 2 YIIAHRGASGYAPENTIAAFDLAVKMNADMIEL--DVQLTKDRQIVVIHDDRVDRTTN 57
>sp|A0KKW8|DDL_AERHH D-alanine--D-alanine ligase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=ddl PE=3
SV=1
Length = 329
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 218 PGLWLNIQHDAFYAQHNLSM----RSFVLSVSR-SVVVNYISSPEVNFLRSIAARFRPSM 272
P L+L Q+DA ++ ++ + F+ + S+ S V Y +S E + ++ IA F S
Sbjct: 132 PYLFLTEQNDAALSEAKAALAKWGKVFIKAASQGSSVGCYSASNEADLVKGIADAFGYSE 191
Query: 273 TKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTI 332
L+ + + E+E Q YG L + T+ I VP+D + +E HT
Sbjct: 192 QVLIEKAVKPRELEVAVYQ-YGDEL-----VATYPGEICVPQDKFYTYEEKYSSASHTET 245
Query: 333 VLDAH 337
L A
Sbjct: 246 ALRAE 250
>sp|Q3KTM2|GDPD5_CHICK Glycerophosphodiester phosphodiesterase domain-containing protein 5
OS=Gallus gallus GN=GDPD5 PE=1 SV=1
Length = 599
Score = 35.8 bits (81), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQ 467
+I GA P T +++QKA+ + + V +S DGVPF + L +TN +
Sbjct: 230 IIGHRGAPMLAPENTLMSFQKAVEQKIYGVQADVILSYDGVPFLMHDKTLRRTTNVEE 287
>sp|A4SN40|DDL_AERS4 D-alanine--D-alanine ligase OS=Aeromonas salmonicida (strain A449)
GN=ddl PE=3 SV=1
Length = 329
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 218 PGLWLNIQHDAFYAQHNLSM----RSFVLSVSR-SVVVNYISSPEVNFLRSIAARFRPSM 272
P L+L Q+DA + ++ + F+ + S+ S V Y +S E + L+ I F S
Sbjct: 132 PYLFLTEQNDAALTEAKAALAKWGKVFIKAASQGSSVGCYSASNETDLLQGIKDAFGYSE 191
Query: 273 TKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTI 332
L+ + + E+E Q YG L I T+ I VP+D + +E HT
Sbjct: 192 QVLIEKAVKPRELEVAVYQ-YGDEL-----IATYPGEICVPQDKFYTYEEKYSSASHTAT 245
Query: 333 VLDA 336
L A
Sbjct: 246 SLKA 249
>sp|Q08959|PGC1_YEAST Phosphatidylglycerol phospholipase C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PGC1 PE=1 SV=1
Length = 321
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGV 450
++ YP T LA++KA + G D I+ +QM+ DG+
Sbjct: 4 IVGHRAFKARYPENTLLAFEKAYAAGADVIETDLQMTSDGM 44
>sp|Q6GIR7|53DR_STAAR Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0778 PE=3 SV=1
Length = 180
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375
L ++PH V+ E +V+ + A D+P SF+ Y+ L E+ F+D F
Sbjct: 66 HLKVMPHAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHF 118
>sp|P66841|53DR_STAAN Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus aureus
(strain N315) GN=SA0680 PE=3 SV=1
Length = 180
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375
L ++PH V+ E +V+ + A D+P SF+ Y+ L E+ F+D F
Sbjct: 66 HLKVMPHAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHF 118
>sp|P66840|53DR_STAAM Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0725 PE=1 SV=1
Length = 180
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375
L ++PH V+ E +V+ + A D+P SF+ Y+ L E+ F+D F
Sbjct: 66 HLKVMPHAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHF 118
>sp|P75212|Y566_MYCPN Uncharacterized protein MG385 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_566 PE=4 SV=1
Length = 237
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDE 135
F++A G+S I P+++ +A++ + LW +VQLTKD+
Sbjct: 3 KQFLIAHRGYSTIAPENTHLAFAAAQLFGFDG--LWMEVQLTKDK 45
>sp|Q9CZQ6|RAE1E_MOUSE Retinoic acid early-inducible protein 1-epsilon OS=Mus musculus
GN=Raet1e PE=2 SV=1
Length = 251
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 80/195 (41%), Gaps = 21/195 (10%)
Query: 99 GFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQ 158
G++ D+ S+ +LT+ + + WCDV+ + DE I + +NI + +
Sbjct: 24 GYTNGLDDAHSLRCNLTIKDPTSADLPWCDVKCSVDEITIL-------HLNNINKTMTSG 76
Query: 159 QKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGF---QILTVQDMARQI 215
+ N + LNDL + ++ ++ D NG+ Q+ + ++
Sbjct: 77 DPGKMANATGK----CLTQPLNDLCQELRDKVSNTKVDTHKTNGYPHLQVTMIYPQSQGQ 132
Query: 216 KPPGLW-LNIQHDAFYA--QHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSM 272
P W NI F+ N+S RS + S V+ + + ++ + F P
Sbjct: 133 TPSATWEFNISDSYFFTFYTENMSWRS---ANDESGVIMNKWKDDGDLVQQLKY-FIPQC 188
Query: 273 TKLVFRFLGKSEIEP 287
+ + FL +S+ +P
Sbjct: 189 RQKIDEFLKQSKEKP 203
>sp|Q4UNB8|Y089_RICFE Uncharacterized protein RF_0089 OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=RF_0089 PE=3 SV=1
Length = 1138
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 338 KERLEVFASNFANDIPISFNYSYDPLTE--YLSFIDNGDFSVDGVLSDFPLTPSAAVDCF 395
K+R+ V F D+P+ Y +P + Y SF+D D + P P A V C
Sbjct: 201 KDRICVSTKGFTGDVPVGCKYMKEPFPKSMYNSFMDVADKDFIQDPKETPTDPLALVSCS 260
Query: 396 AHLGK------NASKSANLL 409
A G NASK+A ++
Sbjct: 261 AAGGGCYQKAYNASKTAVVM 280
>sp|Q8NU97|PKN2_CORGL Serine/threonine-protein kinases PknA OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=pknA PE=3 SV=1
Length = 469
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 2 SYTYMTTPPNATHSFCSLSLSLSKEEKSRTFIKRIGGAPAELNLSEMCNTRALGLLLVSA 61
+Y Y P A H+FC + + + E ++R G P +L L M A GL ++
Sbjct: 83 TYDYREVPDPAGHTFCFIVMEFVRGESLADLLEREGRLPEDLALDVMEQA-AHGLSVIHR 141
Query: 62 LVVLH 66
+ ++H
Sbjct: 142 MDMVH 146
>sp|Q9ESM6|GDPD2_MOUSE Glycerophosphoinositol inositolphosphodiesterase GDPD2 OS=Mus
musculus GN=Gdpd2 PE=1 SV=1
Length = 539
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Query: 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSK 469
++ GA P T ++ +K G + V +S DGVPF + L +TN A
Sbjct: 227 LVGHRGAPMLAPENTLMSLRKTAECGAAVFETDVMVSSDGVPFLMHDERLSRTTNVA--- 283
Query: 470 FNSITTTIPE-IMAGSGIFSFSLIWDEIQTL 499
+ PE I A S FS W E+Q L
Sbjct: 284 -----SVFPERISAHSSDFS----WAELQRL 305
>sp|Q4WXH8|DPOE_ASPFU DNA polymerase epsilon catalytic subunit A OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=pol2 PE=3 SV=1
Length = 2230
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 288 TTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLY---LLPHTTIVLDAHKERLEVF 344
T + G+L + L ++ + I++P + P ES Y LL T V H E +E
Sbjct: 503 TLRKGTGTLCEMLLMVQAYKGEIVLPNKHKDP-PESFYEGHLLESETYV-GGHVESIE-- 558
Query: 345 ASNFANDIPISFNYSYDPLTEYLSFIDNG-DFSVD 378
A F +DIP++FN + E L +D FS++
Sbjct: 559 AGVFRSDIPVTFNIDTTAIDELLRDLDAALKFSIE 593
>sp|Q8NXN2|53DR_STAAW Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus aureus
(strain MW2) GN=MW0687 PE=3 SV=1
Length = 180
Score = 32.3 bits (72), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375
L ++P+ V+ E +V+ + A D+P SF+ Y+ L E+ F+D F
Sbjct: 66 HLKVMPYAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHF 118
>sp|Q6GBA5|53DR_STAAS Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0690 PE=3 SV=1
Length = 180
Score = 32.3 bits (72), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375
L ++P+ V+ E +V+ + A D+P SF+ Y+ L E+ F+D F
Sbjct: 66 HLKVMPYAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHF 118
>sp|Q5HHU8|53DR_STAAC Putative 5'(3')-deoxyribonucleotidase OS=Staphylococcus aureus
(strain COL) GN=SACOL0785 PE=3 SV=1
Length = 180
Score = 32.3 bits (72), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375
L ++P+ V+ E +V+ + A D+P SF+ Y+ L E+ F+D F
Sbjct: 66 HLKVMPYAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHF 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,445,511
Number of Sequences: 539616
Number of extensions: 7462810
Number of successful extensions: 16668
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 16636
Number of HSP's gapped (non-prelim): 48
length of query: 504
length of database: 191,569,459
effective HSP length: 122
effective length of query: 382
effective length of database: 125,736,307
effective search space: 48031269274
effective search space used: 48031269274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)