Query 010671
Match_columns 504
No_of_seqs 449 out of 2690
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 03:14:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010671.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010671hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd08603 GDPD_SHV3_repeat_1 Gly 100.0 7.1E-67 1.5E-71 523.6 28.5 298 92-390 1-298 (299)
2 cd08571 GDPD_SHV3_plant Glycer 100.0 6.6E-53 1.4E-57 428.2 25.4 287 92-391 1-302 (302)
3 cd08602 GDPD_ScGlpQ1_like Glyc 100.0 1.5E-51 3.3E-56 419.5 27.0 284 92-385 1-309 (309)
4 cd08604 GDPD_SHV3_repeat_2 Gly 100.0 4E-50 8.7E-55 407.6 25.0 280 92-391 1-300 (300)
5 PRK11143 glpQ glycerophosphodi 100.0 7.1E-49 1.5E-53 405.9 28.8 287 90-393 25-352 (355)
6 cd08600 GDPD_EcGlpQ_like Glyce 100.0 7.7E-49 1.7E-53 401.1 26.7 278 92-386 1-318 (318)
7 cd08560 GDPD_EcGlpQ_like_1 Gly 100.0 8.8E-49 1.9E-53 404.1 26.3 292 90-394 15-356 (356)
8 cd08559 GDPD_periplasmic_GlpQ_ 100.0 1.3E-46 2.7E-51 381.8 24.5 274 92-385 1-296 (296)
9 cd08601 GDPD_SaGlpQ_like Glyce 100.0 9.2E-44 2E-48 353.6 23.2 239 93-392 2-255 (256)
10 cd08580 GDPD_Rv2277c_like Glyc 100.0 1.7E-43 3.6E-48 352.1 23.1 244 92-388 1-263 (263)
11 cd08574 GDPD_GDE_2_3_6 Glycero 100.0 3.2E-43 6.9E-48 349.1 23.8 233 91-384 1-252 (252)
12 cd08610 GDPD_GDE6 Glycerophosp 100.0 2.9E-43 6.3E-48 358.3 22.4 248 89-396 20-286 (316)
13 cd08612 GDPD_GDE4 Glycerophosp 100.0 1.8E-42 3.9E-47 352.1 24.7 256 88-393 23-299 (300)
14 cd08609 GDPD_GDE3 Glycerophosp 100.0 1.5E-42 3.3E-47 353.1 22.7 245 91-397 26-287 (315)
15 cd08608 GDPD_GDE2 Glycerophosp 100.0 1.6E-42 3.4E-47 356.7 22.9 241 91-393 1-261 (351)
16 PRK09454 ugpQ cytoplasmic glyc 100.0 3.1E-42 6.8E-47 341.4 23.3 231 91-391 7-245 (249)
17 cd08581 GDPD_like_1 Glyceropho 100.0 3.7E-42 8E-47 336.8 22.2 222 94-385 1-229 (229)
18 cd08562 GDPD_EcUgpQ_like Glyce 100.0 1.2E-41 2.6E-46 332.2 24.0 222 94-385 1-229 (229)
19 cd08575 GDPD_GDE4_like Glycero 100.0 1.6E-41 3.5E-46 339.2 22.1 244 92-388 1-264 (264)
20 cd08563 GDPD_TtGDE_like Glycer 100.0 7.1E-41 1.5E-45 327.6 24.3 224 92-385 1-230 (230)
21 cd08582 GDPD_like_2 Glyceropho 100.0 8E-41 1.7E-45 327.9 24.1 226 94-387 1-233 (233)
22 cd08565 GDPD_pAtGDE_like Glyce 100.0 3.6E-41 7.8E-46 331.1 21.6 228 94-388 1-234 (235)
23 cd08564 GDPD_GsGDE_like Glycer 100.0 4.7E-41 1E-45 335.9 22.6 249 90-392 2-264 (265)
24 cd08568 GDPD_TmGDE_like Glycer 100.0 9.3E-41 2E-45 326.1 23.2 220 93-387 1-225 (226)
25 cd08579 GDPD_memb_like Glycero 100.0 8.2E-41 1.8E-45 325.1 20.9 215 94-385 1-220 (220)
26 cd08567 GDPD_SpGDE_like Glycer 100.0 3.4E-40 7.4E-45 328.4 24.2 242 93-387 2-263 (263)
27 cd08572 GDPD_GDE5_like Glycero 100.0 3E-40 6.4E-45 334.6 24.0 251 93-385 1-293 (293)
28 cd08573 GDPD_GDE1 Glycerophosp 100.0 5.6E-40 1.2E-44 326.9 23.5 231 94-384 1-257 (258)
29 cd08607 GDPD_GDE5 Glycerophosp 100.0 6.3E-40 1.4E-44 331.7 24.2 255 93-385 1-290 (290)
30 cd08570 GDPD_YPL206cp_fungi Gl 100.0 7.4E-40 1.6E-44 321.4 22.4 219 94-385 1-234 (234)
31 cd08561 GDPD_cytoplasmic_ScUgp 100.0 1E-39 2.2E-44 323.3 21.7 240 94-391 1-248 (249)
32 cd08606 GDPD_YPL110cp_fungi Gl 100.0 1.9E-39 4.1E-44 327.7 23.7 248 92-393 2-285 (286)
33 cd08566 GDPD_AtGDE_like Glycer 100.0 7.6E-39 1.6E-43 315.6 22.1 233 93-385 1-240 (240)
34 cd08605 GDPD_GDE5_like_1_plant 100.0 2.8E-38 6.1E-43 318.6 23.6 246 94-385 2-282 (282)
35 cd08613 GDPD_GDE4_like_1 Glyce 100.0 4.6E-37 9.9E-42 309.1 22.4 257 83-388 15-307 (309)
36 COG0584 UgpQ Glycerophosphoryl 100.0 9.9E-37 2.1E-41 302.8 22.6 242 91-393 5-255 (257)
37 cd08585 GDPD_like_3 Glyceropho 100.0 7.9E-37 1.7E-41 300.6 21.4 225 92-382 4-236 (237)
38 cd08583 PI-PLCc_GDPD_SF_unchar 100.0 2.2E-36 4.8E-41 297.3 22.2 225 94-386 1-236 (237)
39 PF03009 GDPD: Glycerophosphor 100.0 7.9E-36 1.7E-40 292.3 18.2 239 97-387 1-256 (256)
40 cd08556 GDPD Glycerophosphodie 100.0 2.3E-31 5E-36 250.8 20.8 185 94-384 1-189 (189)
41 cd08555 PI-PLCc_GDPD_SF Cataly 100.0 1.5E-29 3.2E-34 238.7 17.1 165 94-384 1-179 (179)
42 cd08603 GDPD_SHV3_repeat_1 Gly 99.9 6.4E-25 1.4E-29 220.8 8.7 93 408-501 1-96 (299)
43 KOG2258 Glycerophosphoryl dies 99.9 2E-24 4.4E-29 222.5 11.6 275 69-394 48-331 (341)
44 cd08604 GDPD_SHV3_repeat_2 Gly 99.9 5.4E-24 1.2E-28 216.4 8.5 94 408-501 1-94 (300)
45 cd08578 GDPD_NUC-2_fungi Putat 99.9 3E-22 6.5E-27 202.5 20.2 205 108-349 17-276 (300)
46 cd08571 GDPD_SHV3_plant Glycer 99.9 1.1E-23 2.3E-28 214.3 8.2 93 408-501 1-94 (302)
47 cd08560 GDPD_EcGlpQ_like_1 Gly 99.9 5.8E-23 1.3E-27 212.4 8.8 98 405-502 14-118 (356)
48 cd08574 GDPD_GDE_2_3_6 Glycero 99.9 5.9E-23 1.3E-27 204.0 7.6 97 407-503 1-120 (252)
49 cd08602 GDPD_ScGlpQ1_like Glyc 99.9 2E-22 4.3E-27 205.7 8.7 94 408-501 1-96 (309)
50 cd08609 GDPD_GDE3 Glycerophosp 99.9 3.9E-22 8.4E-27 203.5 8.1 97 407-503 26-145 (315)
51 PRK09454 ugpQ cytoplasmic glyc 99.9 4.2E-22 9.1E-27 197.5 7.8 95 406-503 6-102 (249)
52 cd08608 GDPD_GDE2 Glycerophosp 99.9 4.1E-22 9E-27 205.6 7.7 96 407-503 1-120 (351)
53 cd08600 GDPD_EcGlpQ_like Glyce 99.9 5.1E-22 1.1E-26 203.5 8.1 86 408-500 1-86 (318)
54 cd08610 GDPD_GDE6 Glycerophosp 99.9 6.4E-22 1.4E-26 201.9 8.2 100 403-503 18-141 (316)
55 cd08581 GDPD_like_1 Glyceropho 99.9 4.7E-22 1E-26 194.8 6.9 91 410-503 1-95 (229)
56 PRK11143 glpQ glycerophosphodi 99.9 9.2E-22 2E-26 204.0 8.8 91 404-501 23-113 (355)
57 cd08580 GDPD_Rv2277c_like Glyc 99.8 1.2E-21 2.6E-26 195.4 7.6 94 408-504 1-102 (263)
58 cd08612 GDPD_GDE4 Glycerophosp 99.8 2.2E-21 4.8E-26 197.5 8.2 97 405-504 24-130 (300)
59 cd08559 GDPD_periplasmic_GlpQ_ 99.8 5.2E-21 1.1E-25 194.4 8.0 59 408-466 1-59 (296)
60 cd08584 PI-PLCc_GDPD_SF_unchar 99.8 2.7E-19 5.9E-24 168.5 18.5 187 94-388 1-192 (192)
61 cd08562 GDPD_EcUgpQ_like Glyce 99.8 5.3E-21 1.2E-25 186.6 6.8 91 410-503 1-93 (229)
62 cd08568 GDPD_TmGDE_like Glycer 99.8 9E-21 2E-25 185.2 7.7 71 409-482 1-71 (226)
63 cd08575 GDPD_GDE4_like Glycero 99.8 9.9E-21 2.1E-25 189.3 7.0 93 408-503 1-104 (264)
64 cd08573 GDPD_GDE1 Glycerophosp 99.8 9.6E-21 2.1E-25 188.8 6.7 91 410-503 1-95 (258)
65 cd08566 GDPD_AtGDE_like Glycer 99.8 1.2E-20 2.5E-25 186.3 6.9 91 409-503 1-94 (240)
66 KOG2258 Glycerophosphoryl dies 99.8 4.4E-21 9.6E-26 197.8 3.0 127 334-467 2-128 (341)
67 cd08601 GDPD_SaGlpQ_like Glyce 99.8 2.1E-20 4.6E-25 185.9 7.7 92 409-503 2-105 (256)
68 cd08582 GDPD_like_2 Glyceropho 99.8 2.7E-20 5.8E-25 182.6 6.9 91 410-503 1-93 (233)
69 cd08563 GDPD_TtGDE_like Glycer 99.8 3.2E-20 6.9E-25 181.7 7.3 93 408-503 1-95 (230)
70 cd08565 GDPD_pAtGDE_like Glyce 99.8 3.3E-20 7.3E-25 182.4 7.2 86 410-503 1-88 (235)
71 cd08579 GDPD_memb_like Glycero 99.8 3.8E-20 8.3E-25 179.9 7.2 87 410-503 1-89 (220)
72 cd08570 GDPD_YPL206cp_fungi Gl 99.8 4.9E-20 1.1E-24 181.0 7.5 57 410-466 1-57 (234)
73 COG0584 UgpQ Glycerophosphoryl 99.8 7E-20 1.5E-24 182.0 7.4 93 407-503 5-99 (257)
74 cd08567 GDPD_SpGDE_like Glycer 99.8 7.5E-20 1.6E-24 182.1 7.6 55 409-463 2-56 (263)
75 cd08561 GDPD_cytoplasmic_ScUgp 99.8 1.5E-19 3.2E-24 179.1 6.9 91 410-503 1-101 (249)
76 cd08564 GDPD_GsGDE_like Glycer 99.8 1.8E-19 4E-24 180.2 7.2 95 406-503 2-114 (265)
77 cd08613 GDPD_GDE4_like_1 Glyce 99.8 3.1E-19 6.6E-24 180.2 8.5 99 403-504 19-150 (309)
78 cd08572 GDPD_GDE5_like Glycero 99.8 2E-19 4.2E-24 182.6 7.1 58 409-466 1-66 (293)
79 cd08585 GDPD_like_3 Glyceropho 99.8 2.8E-19 6.1E-24 176.1 6.9 88 408-503 4-94 (237)
80 cd08607 GDPD_GDE5 Glycerophosp 99.8 2.7E-19 5.9E-24 181.1 6.6 95 409-503 1-124 (290)
81 cd08606 GDPD_YPL110cp_fungi Gl 99.8 5.8E-19 1.3E-23 178.4 7.2 92 408-503 2-115 (286)
82 PF03009 GDPD: Glycerophosphor 99.7 2.6E-18 5.6E-23 168.2 7.1 55 413-467 1-55 (256)
83 cd08605 GDPD_GDE5_like_1_plant 99.7 1.2E-17 2.6E-22 168.6 7.6 95 410-504 2-128 (282)
84 cd08583 PI-PLCc_GDPD_SF_unchar 99.7 1.2E-17 2.7E-22 164.3 6.4 53 410-462 1-55 (237)
85 cd08555 PI-PLCc_GDPD_SF Cataly 99.6 2.2E-16 4.7E-21 149.0 5.6 55 410-464 1-55 (179)
86 cd08556 GDPD Glycerophosphodie 99.6 3.3E-15 7.1E-20 140.6 5.8 47 410-456 1-47 (189)
87 cd08576 GDPD_like_SMaseD_PLD G 99.2 4E-10 8.6E-15 111.7 16.4 220 94-395 2-249 (265)
88 cd08584 PI-PLCc_GDPD_SF_unchar 99.1 4.5E-11 9.7E-16 113.1 4.6 45 410-464 1-45 (192)
89 cd08577 PI-PLCc_GDPD_SF_unchar 99.1 7.3E-10 1.6E-14 108.5 12.7 93 112-250 15-108 (228)
90 cd08578 GDPD_NUC-2_fungi Putat 98.6 3.4E-08 7.4E-13 100.4 5.1 56 424-483 17-72 (300)
91 cd08592 PI-PLCc_gamma Catalyti 98.0 6.4E-06 1.4E-10 80.2 5.3 44 101-146 24-67 (229)
92 cd08592 PI-PLCc_gamma Catalyti 98.0 6.2E-06 1.3E-10 80.3 5.1 44 418-461 25-68 (229)
93 PF13653 GDPD_2: Glycerophosph 97.9 3.7E-06 8.1E-11 55.5 0.8 30 342-386 1-30 (30)
94 cd08627 PI-PLCc_gamma1 Catalyt 97.9 1.7E-05 3.8E-10 76.9 5.2 44 418-461 25-68 (229)
95 cd08627 PI-PLCc_gamma1 Catalyt 97.9 1.9E-05 4.2E-10 76.6 5.3 44 101-146 24-67 (229)
96 KOG2421 Predicted starch-bindi 97.6 6E-06 1.3E-10 87.8 -2.5 58 91-150 324-388 (417)
97 KOG2421 Predicted starch-bindi 97.3 4.2E-05 9.1E-10 81.4 -0.3 57 408-464 325-388 (417)
98 cd08597 PI-PLCc_PRIP_metazoa C 97.2 0.00038 8.3E-09 69.3 4.7 42 419-460 26-67 (260)
99 cd08597 PI-PLCc_PRIP_metazoa C 97.2 0.0004 8.8E-09 69.1 4.8 42 102-145 25-66 (260)
100 smart00148 PLCXc Phospholipase 96.8 0.0021 4.4E-08 58.1 5.0 44 417-460 23-66 (135)
101 smart00148 PLCXc Phospholipase 96.7 0.0025 5.5E-08 57.5 4.9 43 101-145 23-65 (135)
102 cd08577 PI-PLCc_GDPD_SF_unchar 96.6 0.0022 4.7E-08 63.1 4.0 44 412-462 5-48 (228)
103 cd08594 PI-PLCc_eta Catalytic 95.4 0.021 4.6E-07 55.7 4.7 43 418-460 25-67 (227)
104 cd08594 PI-PLCc_eta Catalytic 95.3 0.023 5E-07 55.4 4.8 42 102-145 25-66 (227)
105 cd08633 PI-PLCc_eta2 Catalytic 95.2 0.026 5.7E-07 55.9 4.8 43 418-460 25-67 (254)
106 cd08631 PI-PLCc_delta4 Catalyt 95.0 0.032 6.9E-07 55.6 4.7 42 419-460 26-67 (258)
107 cd08596 PI-PLCc_epsilon Cataly 94.9 0.035 7.5E-07 55.2 4.8 42 419-460 26-67 (254)
108 cd08558 PI-PLCc_eukaryota Cata 94.9 0.038 8.2E-07 54.0 5.0 43 418-460 25-67 (226)
109 cd08632 PI-PLCc_eta1 Catalytic 94.9 0.034 7.4E-07 55.0 4.7 42 419-460 26-67 (253)
110 cd08633 PI-PLCc_eta2 Catalytic 94.9 0.035 7.5E-07 55.1 4.8 42 102-145 25-66 (254)
111 cd08595 PI-PLCc_zeta Catalytic 94.9 0.034 7.3E-07 55.3 4.6 42 419-460 26-67 (257)
112 cd08630 PI-PLCc_delta3 Catalyt 94.8 0.037 8E-07 55.2 4.6 42 419-460 26-67 (258)
113 cd08558 PI-PLCc_eukaryota Cata 94.8 0.043 9.4E-07 53.7 5.0 43 101-145 24-66 (226)
114 cd08632 PI-PLCc_eta1 Catalytic 94.7 0.042 9.2E-07 54.4 4.8 42 102-145 25-66 (253)
115 cd08599 PI-PLCc_plant Catalyti 94.7 0.049 1.1E-06 53.4 5.2 42 102-145 25-66 (228)
116 cd08629 PI-PLCc_delta1 Catalyt 94.7 0.042 9.2E-07 54.6 4.8 42 419-460 26-67 (258)
117 cd08628 PI-PLCc_gamma2 Catalyt 94.7 0.038 8.2E-07 54.9 4.4 42 419-460 26-67 (254)
118 cd08595 PI-PLCc_zeta Catalytic 94.7 0.041 9E-07 54.7 4.6 42 102-145 25-66 (257)
119 cd08596 PI-PLCc_epsilon Cataly 94.6 0.045 9.8E-07 54.4 4.8 42 102-145 25-66 (254)
120 cd08599 PI-PLCc_plant Catalyti 94.6 0.051 1.1E-06 53.3 5.1 53 408-460 12-67 (228)
121 cd08631 PI-PLCc_delta4 Catalyt 94.6 0.046 1E-06 54.4 4.7 42 102-145 25-66 (258)
122 cd08630 PI-PLCc_delta3 Catalyt 94.5 0.047 1E-06 54.4 4.6 42 102-145 25-66 (258)
123 cd08593 PI-PLCc_delta Catalyti 94.5 0.047 1E-06 54.4 4.6 42 419-460 26-67 (257)
124 cd08598 PI-PLC1c_yeast Catalyt 94.4 0.054 1.2E-06 53.1 4.8 42 419-460 26-67 (231)
125 cd08629 PI-PLCc_delta1 Catalyt 94.3 0.056 1.2E-06 53.8 4.7 42 102-145 25-66 (258)
126 cd08598 PI-PLC1c_yeast Catalyt 94.3 0.06 1.3E-06 52.9 4.9 42 102-145 25-66 (231)
127 cd08626 PI-PLCc_beta4 Catalyti 94.3 0.054 1.2E-06 53.9 4.6 42 419-460 26-69 (257)
128 cd08593 PI-PLCc_delta Catalyti 94.3 0.056 1.2E-06 53.9 4.6 42 102-145 25-66 (257)
129 cd08628 PI-PLCc_gamma2 Catalyt 94.2 0.058 1.3E-06 53.6 4.6 41 103-145 26-66 (254)
130 cd08623 PI-PLCc_beta1 Catalyti 94.0 0.068 1.5E-06 53.3 4.6 42 419-460 26-69 (258)
131 cd08626 PI-PLCc_beta4 Catalyti 94.0 0.065 1.4E-06 53.3 4.5 42 102-145 25-68 (257)
132 cd08624 PI-PLCc_beta2 Catalyti 93.9 0.071 1.5E-06 53.2 4.6 43 418-460 25-69 (261)
133 COG1830 FbaB DhnA-type fructos 93.8 0.75 1.6E-05 45.9 11.3 186 239-440 46-235 (265)
134 cd08624 PI-PLCc_beta2 Catalyti 93.5 0.087 1.9E-06 52.6 4.4 42 102-145 25-68 (261)
135 cd08623 PI-PLCc_beta1 Catalyti 93.5 0.091 2E-06 52.4 4.5 42 102-145 25-68 (258)
136 cd08591 PI-PLCc_beta Catalytic 93.4 0.099 2.1E-06 52.1 4.6 42 419-460 26-69 (257)
137 PF10223 DUF2181: Uncharacteri 93.3 5.1 0.00011 39.8 16.3 36 106-143 11-52 (244)
138 cd08591 PI-PLCc_beta Catalytic 93.2 0.11 2.4E-06 51.7 4.6 42 102-145 25-68 (257)
139 cd08625 PI-PLCc_beta3 Catalyti 93.2 0.11 2.5E-06 51.8 4.6 44 418-461 25-70 (258)
140 cd08625 PI-PLCc_beta3 Catalyti 92.5 0.15 3.2E-06 51.0 4.4 43 101-145 24-68 (258)
141 KOG1264 Phospholipase C [Lipid 92.3 0.11 2.4E-06 58.3 3.4 43 418-460 332-374 (1267)
142 KOG1264 Phospholipase C [Lipid 90.5 0.2 4.4E-06 56.3 3.2 44 101-146 331-374 (1267)
143 PLN02230 phosphoinositide phos 88.6 0.5 1.1E-05 52.6 4.5 43 418-460 138-180 (598)
144 cd08576 GDPD_like_SMaseD_PLD G 87.9 0.56 1.2E-05 47.1 3.9 44 410-460 2-46 (265)
145 PLN02230 phosphoinositide phos 86.8 0.69 1.5E-05 51.6 4.2 52 94-147 127-181 (598)
146 PLN02228 Phosphoinositide phos 86.8 0.76 1.7E-05 50.9 4.5 43 418-460 129-172 (567)
147 KOG0169 Phosphoinositide-speci 85.7 0.71 1.5E-05 52.0 3.6 53 408-460 299-354 (746)
148 PLN02228 Phosphoinositide phos 84.7 1.1 2.3E-05 49.8 4.3 52 94-147 118-173 (567)
149 PLN02952 phosphoinositide phos 84.3 1.2 2.7E-05 49.6 4.7 52 409-460 134-189 (599)
150 KOG0169 Phosphoinositide-speci 82.8 1.1 2.4E-05 50.5 3.5 44 102-147 312-355 (746)
151 PLN02952 phosphoinositide phos 82.3 1.6 3.5E-05 48.7 4.6 52 94-147 135-190 (599)
152 PLN02222 phosphoinositide phos 79.8 2.1 4.6E-05 47.6 4.4 52 409-460 114-169 (581)
153 PLN02223 phosphoinositide phos 78.6 2.1 4.5E-05 47.1 3.8 39 422-460 134-172 (537)
154 PRK06852 aldolase; Validated 78.4 11 0.00024 38.7 8.8 183 240-441 63-264 (304)
155 cd00137 PI-PLCc Catalytic doma 78.3 3.2 7E-05 41.9 4.9 40 421-460 33-72 (274)
156 PLN02222 phosphoinositide phos 76.9 2.8 6E-05 46.7 4.3 52 94-147 115-170 (581)
157 PF00388 PI-PLC-X: Phosphatidy 76.4 3.9 8.5E-05 36.9 4.5 41 420-460 24-64 (146)
158 PRK08227 autoinducer 2 aldolas 74.3 15 0.00033 37.0 8.3 91 330-441 130-225 (264)
159 PLN02223 phosphoinositide phos 74.2 3.6 7.8E-05 45.3 4.2 51 94-146 118-172 (537)
160 cd00137 PI-PLCc Catalytic doma 74.2 5 0.00011 40.5 5.0 40 104-145 32-71 (274)
161 cd00958 DhnA Class I fructose- 66.9 37 0.00079 33.0 9.2 100 330-441 112-213 (235)
162 cd08589 PI-PLCc_SaPLC1_like Ca 66.4 10 0.00022 39.2 5.3 41 421-461 43-103 (324)
163 PF00388 PI-PLC-X: Phosphatidy 65.1 11 0.00024 34.0 4.8 39 104-144 24-62 (146)
164 PRK09250 fructose-bisphosphate 64.5 33 0.00072 35.9 8.6 191 239-441 94-317 (348)
165 PF04309 G3P_antiterm: Glycero 54.3 19 0.00042 34.0 4.4 57 329-393 33-89 (175)
166 PF10223 DUF2181: Uncharacteri 51.7 18 0.0004 35.9 4.0 38 422-459 11-54 (244)
167 PLN02746 hydroxymethylglutaryl 48.5 80 0.0017 33.1 8.4 99 330-444 165-275 (347)
168 PRK12330 oxaloacetate decarbox 47.3 2.5E+02 0.0054 31.1 12.2 95 330-444 127-234 (499)
169 PF02638 DUF187: Glycosyl hydr 46.3 15 0.00032 37.9 2.6 18 330-347 73-90 (311)
170 cd00945 Aldolase_Class_I Class 46.1 46 0.00099 30.7 5.7 67 364-442 17-85 (201)
171 KOG1265 Phospholipase C [Lipid 45.4 24 0.00053 40.9 4.2 39 422-460 341-381 (1189)
172 PRK12581 oxaloacetate decarbox 43.8 2.8E+02 0.0061 30.4 11.8 158 257-444 71-240 (468)
173 PRK13396 3-deoxy-7-phosphohept 43.7 2.1E+02 0.0047 30.1 10.6 31 420-450 284-314 (352)
174 cd04728 ThiG Thiazole synthase 43.7 90 0.002 31.1 7.4 90 330-447 110-209 (248)
175 COG5016 Pyruvate/oxaloacetate 40.7 1.5E+02 0.0032 31.9 8.7 97 330-444 128-233 (472)
176 cd03174 DRE_TIM_metallolyase D 40.5 73 0.0016 31.2 6.4 100 330-444 118-224 (265)
177 COG0826 Collagenase and relate 39.2 44 0.00096 35.0 4.8 104 330-445 52-168 (347)
178 PF06072 Herpes_US9: Alphaherp 38.8 45 0.00097 25.7 3.4 22 24-45 6-27 (60)
179 cd07945 DRE_TIM_CMS Leptospira 38.7 91 0.002 31.6 6.9 99 330-444 118-225 (280)
180 TIGR03151 enACPred_II putative 37.1 1.9E+02 0.0041 29.7 9.0 87 329-444 98-192 (307)
181 TIGR01362 KDO8P_synth 3-deoxy- 36.7 4.2E+02 0.009 26.7 10.8 29 421-449 200-228 (258)
182 PRK05692 hydroxymethylglutaryl 35.4 1.8E+02 0.0038 29.6 8.4 99 330-444 123-233 (287)
183 cd07938 DRE_TIM_HMGL 3-hydroxy 34.3 1.4E+02 0.003 30.2 7.3 99 330-444 117-227 (274)
184 cd08589 PI-PLCc_SaPLC1_like Ca 32.8 49 0.0011 34.4 3.8 42 105-148 43-104 (324)
185 PRK00208 thiG thiazole synthas 32.5 1.9E+02 0.004 29.0 7.6 90 330-447 110-209 (250)
186 cd07944 DRE_TIM_HOA_like 4-hyd 32.0 1.2E+02 0.0025 30.5 6.4 99 330-444 112-217 (266)
187 KOG1265 Phospholipase C [Lipid 31.8 54 0.0012 38.2 4.1 38 106-145 341-380 (1189)
188 PTZ00066 pyruvate kinase; Prov 31.7 2.5E+02 0.0055 31.1 9.2 136 244-397 218-370 (513)
189 PRK14042 pyruvate carboxylase 31.6 6.9E+02 0.015 28.3 12.8 157 257-444 62-231 (596)
190 cd08590 PI-PLCc_Rv2075c_like C 31.4 58 0.0013 32.8 4.1 36 422-458 41-76 (267)
191 PF10566 Glyco_hydro_97: Glyco 30.0 51 0.0011 33.4 3.3 58 330-390 76-133 (273)
192 PRK11572 copper homeostasis pr 29.0 3.3E+02 0.0071 27.3 8.7 101 326-439 36-145 (248)
193 PF03932 CutC: CutC family; I 28.0 2.3E+02 0.005 27.3 7.3 146 255-428 36-188 (201)
194 PLN02623 pyruvate kinase 27.7 2E+02 0.0043 32.4 7.6 86 299-396 334-437 (581)
195 PRK07998 gatY putative fructos 27.5 3.6E+02 0.0078 27.5 9.0 99 329-442 117-229 (283)
196 PF00224 PK: Pyruvate kinase, 27.3 1.4E+02 0.0031 31.1 6.3 137 242-396 182-335 (348)
197 cd00381 IMPDH IMPDH: The catal 27.3 4.7E+02 0.01 27.0 10.0 99 330-455 123-250 (325)
198 PRK05198 2-dehydro-3-deoxyphos 27.2 6.6E+02 0.014 25.4 10.8 30 419-448 206-235 (264)
199 cd07940 DRE_TIM_IPMS 2-isoprop 26.8 2.7E+02 0.0059 27.6 8.0 98 330-444 117-223 (268)
200 PRK14040 oxaloacetate decarbox 26.7 2.5E+02 0.0054 31.7 8.4 95 330-444 127-232 (593)
201 PRK08195 4-hyroxy-2-oxovalerat 26.4 1.8E+02 0.0039 30.3 6.8 98 330-444 118-223 (337)
202 cd07943 DRE_TIM_HOA 4-hydroxy- 26.4 1.8E+02 0.0039 28.9 6.6 96 330-444 115-219 (263)
203 COG2200 Rtn c-di-GMP phosphodi 26.1 88 0.0019 31.0 4.3 40 330-384 196-235 (256)
204 COG4747 ACT domain-containing 26.0 83 0.0018 27.9 3.4 44 330-394 18-61 (142)
205 PRK13397 3-deoxy-7-phosphohept 25.9 6.8E+02 0.015 25.0 16.3 40 407-449 185-226 (250)
206 PRK06806 fructose-bisphosphate 25.8 3.5E+02 0.0077 27.4 8.6 103 329-445 117-233 (281)
207 CHL00200 trpA tryptophan synth 25.2 7E+02 0.015 25.0 12.6 88 329-439 133-228 (263)
208 PF09370 TIM-br_sig_trns: TIM- 24.9 83 0.0018 31.7 3.7 42 330-387 140-181 (268)
209 PRK14041 oxaloacetate decarbox 24.8 2.1E+02 0.0046 31.3 7.2 96 330-444 125-230 (467)
210 PRK08673 3-deoxy-7-phosphohept 24.4 6.3E+02 0.014 26.4 10.3 28 424-451 279-306 (335)
211 cd08588 PI-PLCc_At5g67130_like 23.8 88 0.0019 31.5 3.8 49 408-457 16-69 (270)
212 PRK11572 copper homeostasis pr 23.4 2.8E+02 0.006 27.8 7.1 156 255-440 37-196 (248)
213 cd07947 DRE_TIM_Re_CS Clostrid 23.3 3.1E+02 0.0068 27.7 7.7 105 330-444 118-237 (279)
214 cd08557 PI-PLCc_bacteria_like 23.2 89 0.0019 30.7 3.7 38 423-460 38-76 (271)
215 TIGR03217 4OH_2_O_val_ald 4-hy 23.1 2.3E+02 0.0049 29.5 6.8 98 330-444 117-222 (333)
216 PRK06739 pyruvate kinase; Vali 23.0 3.8E+02 0.0082 28.2 8.4 137 243-397 172-326 (352)
217 PF10210 MRP-S32: Mitochondria 22.6 64 0.0014 27.4 2.1 17 127-143 4-21 (96)
218 PRK12858 tagatose 1,6-diphosph 22.6 4.1E+02 0.0089 27.8 8.5 105 330-441 146-275 (340)
219 TIGR01859 fruc_bis_ald_ fructo 22.5 5.9E+02 0.013 25.8 9.5 99 330-442 118-230 (282)
220 COG2084 MmsB 3-hydroxyisobutyr 22.5 2.4E+02 0.0052 28.8 6.6 117 330-454 13-136 (286)
221 cd06589 GH31 The enzymes of gl 22.3 1.2E+02 0.0026 30.1 4.5 47 329-385 68-115 (265)
222 PRK11557 putative DNA-binding 22.2 3E+02 0.0064 27.3 7.3 88 330-441 119-208 (278)
223 cd04732 HisA HisA. Phosphorib 22.1 4.9E+02 0.011 24.9 8.6 104 330-450 62-173 (234)
224 PF11814 DUF3335: Peptidase_C3 22.1 4.2E+02 0.0091 25.8 7.8 45 420-464 114-172 (207)
225 PRK07226 fructose-bisphosphate 22.0 4.7E+02 0.01 26.0 8.6 101 330-441 129-230 (267)
226 PRK15452 putative protease; Pr 21.6 76 0.0016 34.5 3.0 57 330-393 49-106 (443)
227 PF13167 GTP-bdg_N: GTP-bindin 21.4 3.1E+02 0.0067 23.2 6.0 62 330-393 11-74 (95)
228 COG1649 Uncharacterized protei 20.8 67 0.0014 34.6 2.3 18 330-347 118-135 (418)
229 PRK12331 oxaloacetate decarbox 20.5 3.2E+02 0.0069 29.7 7.5 97 330-444 126-231 (448)
230 PF03102 NeuB: NeuB family; I 20.2 8.5E+02 0.018 24.1 11.3 138 237-445 57-204 (241)
231 PRK01261 aroD 3-dehydroquinate 20.1 2.3E+02 0.005 27.8 5.8 34 406-445 76-109 (229)
No 1
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=100.00 E-value=7.1e-67 Score=523.62 Aligned_cols=298 Identities=64% Similarity=1.113 Sum_probs=275.2
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+||.+||||++||+.|++.|+++.+||||||+||||++||+||.+|+|+||++..|++|++++.|||++..|
T Consensus 1 plVIAHRGasg~~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgvlVv~HD~~L~rtT~v~~~F~~r~~t~~idG~~~~g 80 (299)
T cd08603 1 PLVIARGGFSGLFPDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTIARVYPKRKKTYSVNGVSTKG 80 (299)
T ss_pred CeEEecCCCCCCCCcchHHHHHHHHHcCCCCCEEEEEeeECcCCcEEEeCCccccccCCCccccccccccccccccccCC
Confidence 78999999999999999999999999999533899999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHHHHHHhcCCc
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN 251 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~~ 251 (504)
|++.|+||+||++|++.+....|++.|+| .++||||+|+|++++..++++|||++.++.+.|+++++.|+++|++++++
T Consensus 81 ~~~~d~TlaELk~L~~~~~~~~r~~~~~g-~~~IpTLeEvl~~~~~~gi~i~ie~~~~~~~~gl~~~~~l~~~L~~~~~v 159 (299)
T cd08603 81 WFSVDFTLAELQQVTLIQGIFSRTPIFDG-QYPISTVEDVVTLAKPEGLWLNVQHDAFYQQHNLSMSSYLLSLSKTVKVD 159 (299)
T ss_pred ceeccCCHHHHhhCCCCCCcccCCcccCC-cCCCCCHHHHHHHhHhcCeEEEEecHHHHHHcCCCHHHHHHHHHHHcCcE
Confidence 99999999999999998776678899998 66999999999999888999999999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCCCCHH
Q 010671 252 YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTT 331 (504)
Q Consensus 252 ~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~ 331 (504)
+||||+...|+++++.....+.+++|.+++.+++.++++.+|++|+++|++|++||++|+|++.+++|.+.+.++..+++
T Consensus 160 ~iQSfe~~~L~~l~~~~~~~~~~Lv~~l~~~~~~~~~~~~~y~~~~~~L~eIa~yAdgig~~k~~i~p~~~~~~~~~~t~ 239 (299)
T cd08603 160 YISSPEVGFLKSIGGRVGRNGTKLVFRFLDKDDVEPSTNQTYGSILKNLTFIKTFASGILVPKSYIWPVDSDQYLQPATS 239 (299)
T ss_pred EEECCCHHHHHHHHHhcccCCCCeeeEeccCCCcCCCCCccHHHHHHhHHHHHHHHhhcCCChhheeecCCCCcccCccH
Confidence 99999999999999863222578998677777777778899999999999999999999999999999877777888899
Q ss_pred HHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHH
Q 010671 332 IVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (504)
Q Consensus 332 lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~ 390 (504)
+|++||++||+||+|||+||....++|+.||..||..+++.|.+|||||+||||+++.+
T Consensus 240 lV~~Ah~agL~Vh~~tfr~e~~~~~~~~~d~~~e~~~~~~~g~~~vDGvfTDfP~~a~~ 298 (299)
T cd08603 240 LVQDAHKAGLEVYASGFANDFDISYNYSYDPVAEYLSFVGNGNFSVDGVLSDFPITASE 298 (299)
T ss_pred HHHHHHHcCCeEEEEEeeCCCCccccccCCHHHHHHHHHhcCCCCCCEEEecCchhhcc
Confidence 99999999999999999999668889999999999999988778899999999998764
No 2
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=100.00 E-value=6.6e-53 Score=428.19 Aligned_cols=287 Identities=44% Similarity=0.732 Sum_probs=234.4
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+||+...++.++++|.++|.+..|
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~IE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~g 78 (302)
T cd08571 1 PLVIARGGASGDYPDSTDLAYQKAISDGAD--VLDCDVQLTKDGVPICLPSINLDNSTTIASVFPKRKKTYVVEGQSTSG 78 (302)
T ss_pred CeEEeCCCcCCCCCcchHHHHHHHHHcCCC--EEEeeeeEcCCCcEEEeCCchhcCCcccccccccccceecccCcccCC
Confidence 789999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHhcCcccCCcc----CCCCCCCCCCcccCCHHHHHHHhCC---CceEEeeccchhhhc-cchHHHHHHHH
Q 010671 172 WFSIDYTLNDLSNIILNQGVY----SRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYAQ-HNLSMRSFVLS 243 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~----~r~~~~~g~~~~IpTLeEvL~~~k~---~~l~iEIK~~~~~~~-~~~~~~~~v~~ 243 (504)
|++.|+||+||++|+++++.. .|++.|.+ +++||||+|+|++++. .+++||||.+.+... .+..+++.+++
T Consensus 79 ~~v~d~T~aeL~~l~~~~~~~~~~~~~~~~~~~-~~~IptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 157 (302)
T cd08571 79 IFSFDLTWAEIQTLKPIISNPFSVLFRNPRNDN-AGKILTLEDFLTLAKPKSLSGVWINVENAAFLAEHKGLLSVDAVLT 157 (302)
T ss_pred eeeeeCCHHHHhhCcccccCcccccCCCcccCC-CCCcCCHHHHHHhhhccCCceEEEEccCchhhhhhccccHHHHHHH
Confidence 999999999999999865332 24566766 6799999999999975 579999998754332 13468889999
Q ss_pred HHHhcCC------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccc
Q 010671 244 VSRSVVV------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYI 317 (504)
Q Consensus 244 ~l~~~g~------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i 317 (504)
+++++++ ++||||++..|+++++..+.+..++++ +.... .. .+ ....+..+..|+.++++++..+
T Consensus 158 ~l~~~~~~~~~~~v~i~SF~~~~L~~~~~~~~~p~v~~~~-l~~~~--~~----~~--~~~~l~~~~~~a~~v~~~~~~~ 228 (302)
T cd08571 158 SLSKAGYDQTAKKVYISSPDSSVLKSFKKRVGTKLVFRVL-DVDDT--EP----DT--LLSNLTEIKKFASGVLVPKSYI 228 (302)
T ss_pred HHHHcCCCCCCCCEEEeCCCHHHHHHHHhccCCCceEEEe-ecCCC--cC----CC--ChhHHHHHHHhcCccccChhHe
Confidence 9999865 389999999999999985112566665 22211 10 00 0113567778899999988887
Q ss_pred cccCccccCCCCHHHHHHHHHcCCeEEEecCCCC-CCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHH
Q 010671 318 WPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (504)
Q Consensus 318 ~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~-~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~ 391 (504)
.|.++..+....+.+|+.||++|++|++||||++ ....|+|..|+..++.+++..+ +||||||||+|+++.+|
T Consensus 229 ~~~~~~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~~~~~~~~~~~~~~~~~~~-~gVDGiiTD~P~~~~~~ 302 (302)
T cd08571 229 WPVDSDSFLTPQTSVVQDAHKAGLEVYVSGFANEFVSLAYDYSADPTLEILSFVGNG-NSVDGVITDFPATAARA 302 (302)
T ss_pred eecCCCCcccCccHHHHHHHHcCCEEEEEEEecCcccccccccCCHHHHHHHHHHhc-CCCCEEEecCchhhhcC
Confidence 7644333444457899999999999999999987 4677889889999999999751 25999999999988753
No 3
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=100.00 E-value=1.5e-51 Score=419.46 Aligned_cols=284 Identities=31% Similarity=0.488 Sum_probs=237.8
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccc--cccccccccccCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ--IFKTQQKNYLVNGVPT 169 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~--~~~~~~~~~~vdG~~~ 169 (504)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++.. .|++|++++.++|.+.
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DVqlTkDg~lVv~HD~~l~rtt~~~~~~~~~~r~~~~~i~~~~~ 78 (309)
T cd08602 1 PLVIAHRGASGYRPEHTLAAYQLAIEQGAD--FIEPDLVSTKDGVLICRHEPELSGTTDVADHPEFADRKTTKTVDGVNV 78 (309)
T ss_pred CeEEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEeeeECCCCcEEEeCCCccccccCccccccccccccccccCCccc
Confidence 689999999999999999999999999999 999999999999999999999999999876 4888888899999998
Q ss_pred CCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--------CceEEeeccchhhhc-cchHHHHH
Q 010671 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--------PGLWLNIQHDAFYAQ-HNLSMRSF 240 (504)
Q Consensus 170 ~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--------~~l~iEIK~~~~~~~-~~~~~~~~ 240 (504)
.|+++.|+||+||++++++.++..+.+.|.+ .++||||+|+|++++. .+++||||.+..... .+..+++.
T Consensus 79 ~~~~v~d~t~~eL~~l~~~~~~~~~~~~~~~-~~~iptL~Evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 157 (309)
T cd08602 79 TGWFTEDFTLAELKTLRARQRLPYRDQSYDG-QFPIPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLGLPMEDK 157 (309)
T ss_pred CCeeeccCCHHHHhhCccCCcCcccCcccCC-CcCcCCHHHHHHHHHhhhhcccccceeEEeecCchhcccccCCCHHHH
Confidence 9999999999999999999877655556776 5799999999999853 579999998765432 35578999
Q ss_pred HHHHHHhcCC------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCcc---CC--CccccHHHHHh--hHHHHHhhh
Q 010671 241 VLSVSRSVVV------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEI---EP--TTNQTYGSLLK--NLTFIKTFA 307 (504)
Q Consensus 241 v~~~l~~~g~------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~---~~--~~~~~y~~l~~--~l~~i~~~a 307 (504)
|+++++++++ ++|+||+++.|+.+++.. ..++++++ ..... .+ ..+.+|.++.. .++.+..++
T Consensus 158 v~~~l~~~~~~~~~~~v~i~SFd~~~L~~~~~~~---~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd08602 158 LLETLKKYGYTGKKAPVFIQSFEVTNLKYLRNKT---DLPLVQLI-DDATIPPQDTPEGDSRTYADLTTDAGLKEIATYA 233 (309)
T ss_pred HHHHHHHcCCCCCCCCEEEECCCHHHHHHHHhhh---CCCeEEEe-cCCCCCcccccccCccchhhhcCHHHHHHHHhhc
Confidence 9999999876 389999999999999986 46888743 22211 11 12356665432 466777789
Q ss_pred cccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCC-CCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 308 SGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 308 ~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~-~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
.+++|++..++|......+...+++|+.+|++|++|++||||++ ...+++|..|+.+++..++++| |||||||+|
T Consensus 234 ~~i~~~~~~~~~~~~~~~~~~~~~~v~~a~~~gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~~~G---VdgiiTD~P 309 (309)
T cd08602 234 DGIGPWKDLIIPSDANGRLGTPTDLVEDAHAAGLQVHPYTFRNENTFLPPDFFGDPYAEYRAFLDAG---VDGLFTDFP 309 (309)
T ss_pred eEEecchheEEecCCCCcccCccHHHHHHHHcCCEEEEEEecCCCcccCcccCCCHHHHHHHHHHhC---CCEEeCCCC
Confidence 99999988887754444455567899999999999999999987 5678999999999999999865 999999998
No 4
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=100.00 E-value=4e-50 Score=407.63 Aligned_cols=280 Identities=23% Similarity=0.420 Sum_probs=222.4
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccc-cccccccccccCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ-IFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~-~~~~~~~~~~vdG~~~~ 170 (504)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+||+.. .|+.+++++ .++.+..
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~rtt~~~~~~~~~~~~~~-~~~~~~~ 77 (300)
T cd08604 1 PLIISHNGASGDYPGCTDLAYQKAVKDGAD--VIDCSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTV-PEIGSTS 77 (300)
T ss_pred CeEEecCCcCCCCCcchHHHHHHHHHcCCC--EEEEeeeEcCCCCEEEeccccccCcccCCccccccccccc-ccccccC
Confidence 689999999999999999999999999999 999999999999999999999999999976 788888774 3333467
Q ss_pred CcccccCCHHHHhcCcccCCc------cCCCCCCCCCCcccCCHHHHHHHhCC---CceEEeeccchhhh-ccchHHHHH
Q 010671 171 GWFSIDYTLNDLSNIILNQGV------YSRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYA-QHNLSMRSF 240 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~------~~r~~~~~g~~~~IpTLeEvL~~~k~---~~l~iEIK~~~~~~-~~~~~~~~~ 240 (504)
||++.|+||+||++|++++.. ..|.+.|.+ +++||||+|+|++++. .+++||||.+.... ..+..+++.
T Consensus 78 ~~~v~d~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~-~~~iptL~Evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 156 (300)
T cd08604 78 GIFTFDLTWSEIQTLKPAISNPYSVTGLFRNPANKN-AGKFLTLSDFLDLAKNKSLSGVLINVENAAYLAEKKGLDVVDA 156 (300)
T ss_pred ceeeecCcHHHHhhCccCCcCcccccCcCCCcccCC-CCCCCCHHHHHHHHHhcCCceEEEEeeccchhhhccCccHHHH
Confidence 888999999999999987422 124566766 5799999999999864 47999999866432 224468999
Q ss_pred HHHHHHhcCC-------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccC
Q 010671 241 VLSVSRSVVV-------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVP 313 (504)
Q Consensus 241 v~~~l~~~g~-------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~ 313 (504)
++++++++++ ++|+||+++.|+.+++.. ..++++.+ .... . .+. ...+..++.++.+++++
T Consensus 157 v~~~l~~~~~~~~~~~~v~i~SF~~~~L~~~~~~~---~~~~~~l~-~~~~--~----~~~--~~~~~~~~~~a~~v~~~ 224 (300)
T cd08604 157 VLDALTNAGYDNQTAQKVLIQSTDSSVLAAFKKQI---SYERVYVV-DETI--R----DAS--DSSIEEIKKFADAVVID 224 (300)
T ss_pred HHHHHHHcCCCCCCCCeEEEEcCCHHHHHHHHhcc---CCceEEEe-cCcc--c----ccC--hhHHHHHHHhccEEEeC
Confidence 9999998876 289999999999999975 46777633 2110 0 110 11245667788889998
Q ss_pred CccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCC-CCccccCCCChHHHHHHHh-hcCCCcccccccCCCCChHHH
Q 010671 314 KDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFI-DNGDFSVDGVLSDFPLTPSAA 391 (504)
Q Consensus 314 ~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~-~~~~~~y~~D~~~e~~~~i-~~G~~gVDGIiTD~P~~~~~~ 391 (504)
+..++|... .++...+.+|+++|++|++|++||||++ ....++|..||.+++.+++ +.| |||||||+|+++.+|
T Consensus 225 ~~~~~~~~~-~~~~~~~~~v~~a~~~Gl~v~vwTvn~~~~~~~~~~~~~~~~~~~~~~~~~G---VdgIiTD~P~~~~~~ 300 (300)
T cd08604 225 RGSVFPVST-SFLTRQTNVVEKLQSANLTVYVEVLRNEFVSLAFDFFADPTVEINSYVQGAG---VDGFITEFPATAARY 300 (300)
T ss_pred hhhcccccC-CcccCchHHHHHHHHCCCEEEEEEecCCccccchhccCCHHHHHHHHHHHcC---CCEEEecCchhhhcC
Confidence 887776432 2344456899999999999999999987 5788899999987766555 555 999999999988753
No 5
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=100.00 E-value=7.1e-49 Score=405.91 Aligned_cols=287 Identities=23% Similarity=0.359 Sum_probs=215.1
Q ss_pred CCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCC
Q 010671 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (504)
Q Consensus 90 ~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~ 169 (504)
.+|+||||||+++.+||||++||++|++.|+| +||||||+||||++||+||.+|+|+|++...||.++++ +|
T Consensus 25 ~~pliiAHRGas~~~PENTl~Af~~A~~~GaD--~IE~DV~lTkDg~lVv~HD~~l~rtT~~~~~~~~~~~~---~g--- 96 (355)
T PRK11143 25 AEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDQLVVLHDHYLDRVTDVAERFPDRARK---DG--- 96 (355)
T ss_pred CCcEEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEeeeEccCCcEEEeCCchhcccCCccccccccccc---CC---
Confidence 47999999999999999999999999999999 99999999999999999999999999998888887654 23
Q ss_pred CCcccccCCHHHHhcCcccCCccC--------CCCCCC---CCCcccCCHHHHHHHhC--------CCceEEeeccchhh
Q 010671 170 PGWFSIDYTLNDLSNIILNQGVYS--------RTDKFD---GNGFQILTVQDMARQIK--------PPGLWLNIQHDAFY 230 (504)
Q Consensus 170 ~g~~v~d~Tl~EL~~l~~~~~~~~--------r~~~~~---g~~~~IpTLeEvL~~~k--------~~~l~iEIK~~~~~ 230 (504)
+|++.|+||+||++++++.++.. ++..|. . +++||||+|+|++++ +.+++||||.+.+.
T Consensus 97 -~~~v~dlT~aEL~~ld~~~~f~~~~g~~~~~~~~~~~~~~~-~~~IPTL~Evl~~~~~~~~~~~~~~~l~IEiK~~~~~ 174 (355)
T PRK11143 97 -RYYAIDFTLDEIKSLKFTEGFDIENGKKVQVYPGRFPMGKS-DFRVHTFEEEIEFIQGLNHSTGKNIGIYPEIKAPWFH 174 (355)
T ss_pred -ceeEeeCcHHHHhhCCCCCCcccccccccccccccccccCC-CCccCCHHHHHHHHHHhhhhcCCCceeeEeccCcccc
Confidence 36899999999999999876421 112222 2 479999999999875 34699999987554
Q ss_pred hccchHHHHHHHHHHHhcCC------ceEecCCHHHHHHHHHhcCCC---CCcEEEEeccCCccCCC---------cccc
Q 010671 231 AQHNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAARFRPS---MTKLVFRFLGKSEIEPT---------TNQT 292 (504)
Q Consensus 231 ~~~~~~~~~~v~~~l~~~g~------~~isSfd~~~L~~l~~~~~~~---~~~lv~~ll~~~~~~~~---------~~~~ 292 (504)
.+.+.++++.++++++++++ ++|+||++..|+.+++...|. +.++++.+.. ....+. .+..
T Consensus 175 ~~~~~~~~~~v~~~l~~~g~~~~~~~v~i~SFd~~~L~~~~~~~~p~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 253 (355)
T PRK11143 175 HQEGKDIAAKVLEVLKKYGYTGKDDKVYLQCFDANELKRIKNELEPKMGMDLKLVQLIAY-TDWNETQEKQPDGKWVNYN 253 (355)
T ss_pred cccchhHHHHHHHHHHHhCCCCCCCCEEEeCCCHHHHHHHHhhcCccccCCcceEEEecc-CCCcccccccccCcccccc
Confidence 43455789999999999876 489999999999999843231 2477764321 111100 1123
Q ss_pred HHHHH--hhHHHHHhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHh
Q 010671 293 YGSLL--KNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFI 370 (504)
Q Consensus 293 y~~l~--~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i 370 (504)
|.++. ..+..++.++.++.|.+..+.+.+...++..++++|+++|++|++|++||||++.. -+|..|+ .++..++
T Consensus 254 ~~~~~~~~~~~~~~~~a~~i~p~~~~l~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTVn~~~~--~~~~~d~-~~~~~~~ 330 (355)
T PRK11143 254 YDWMFKPGAMKEVAKYADGIGPDYHMLVDETSTPGNIKLTGMVKEAHQAKLVVHPYTVRADQL--PEYATDV-NQLYDIL 330 (355)
T ss_pred hhhhcChhhHHHHHhhceeecCChhheeeccccCCccChHHHHHHHHHcCCEEEEEEeccccc--hhhhcCh-HHHHHHH
Confidence 44422 14566777899999877655432222234456789999999999999999998732 1344455 3444443
Q ss_pred --hcCCCcccccccCCCCChHHHHH
Q 010671 371 --DNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 371 --~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
+.| |||||||+|+++.+++.
T Consensus 331 ~~~~G---VDGIiTD~P~~~~~~l~ 352 (355)
T PRK11143 331 YNQAG---VDGVFTDFPDKAVKFLN 352 (355)
T ss_pred HHccC---CCEEEcCChHHHHHHHh
Confidence 555 99999999999988874
No 6
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=100.00 E-value=7.7e-49 Score=401.14 Aligned_cols=278 Identities=26% Similarity=0.351 Sum_probs=211.2
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+||+...|+.++++ +| +
T Consensus 1 ~lviAHRG~s~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~---~g----~ 71 (318)
T cd08600 1 KIIIAHRGASGYLPEHTLEAKALAYAQGAD--YLEQDVVLTKDDKLVVIHDHYLDNVTNVAEKFPDRKRK---DG----R 71 (318)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEeeeeECcCCcEEEeCCchhhccCCccccccccccc---CC----c
Confidence 789999999999999999999999999999 99999999999999999999999999999888887654 23 2
Q ss_pred cccccCCHHHHhcCcccCCccCC--------CCCC---CCCCcccCCHHHHHHHhC--------CCceEEeeccchhhhc
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSR--------TDKF---DGNGFQILTVQDMARQIK--------PPGLWLNIQHDAFYAQ 232 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r--------~~~~---~g~~~~IpTLeEvL~~~k--------~~~l~iEIK~~~~~~~ 232 (504)
|+|.|+||+||++|++++|+..+ +..| .+ .++||||+|+|++++ ..+++||||.+..+.+
T Consensus 72 ~~v~dlT~aEL~~ld~g~~f~~~~~~~~~~~~~~~~~~~~-~~~IptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~ 150 (318)
T cd08600 72 YYVIDFTLDELKSLSVTERFDIENGKKVQVYPNRFPLWKS-DFKIHTLEEEIELIQGLNKSTGKNVGIYPEIKAPWFHHQ 150 (318)
T ss_pred eeEeeCcHHHHhhCCCCCCcccccccccccccccCcccCC-CCccCCHHHHHHHHHHhhhhcCCcceEEEeecCchhhhh
Confidence 68999999999999999876332 1122 23 479999999999885 3579999998765443
Q ss_pred cchHHHHHHHHHHHhcCC------ceEecCCHHHHHHHHH-hcCC---CCCcEEEEeccCCccCC--------CccccHH
Q 010671 233 HNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAA-RFRP---SMTKLVFRFLGKSEIEP--------TTNQTYG 294 (504)
Q Consensus 233 ~~~~~~~~v~~~l~~~g~------~~isSfd~~~L~~l~~-~~~~---~~~~lv~~ll~~~~~~~--------~~~~~y~ 294 (504)
.+.++++.++++++++++ ++|+||++..|+.+++ .. | ...++++.+ ......+ ..+.+|+
T Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~L~~~~~~~~-p~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
T cd08600 151 EGKDIAAATLEVLKKYGYTSKNDKVYLQTFDPNELKRIKNELL-PKMGMDLKLVQLI-AYTDWGETQEKDPGGWVNYDYD 228 (318)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCeEEEEeCCHHHHHHHHHhhC-ccccCCcceEEEe-ccCCCCcccccccCCccccchh
Confidence 445789999999999886 4899999999999997 43 2 046787643 2111111 1123566
Q ss_pred HHHh--hHHHHHhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHH-Hhh
Q 010671 295 SLLK--NLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS-FID 371 (504)
Q Consensus 295 ~l~~--~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~-~i~ 371 (504)
++.. .+..++.++.+++|++..+.+.+...+...++.+|++||++|++|++||||++....+ ..+....+.. +++
T Consensus 229 ~~~~~~~l~~~~~~a~~i~~~~~~l~~~~~~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~--~~~~~~~~~~~l~~ 306 (318)
T cd08600 229 WMFTKGGLKEIAKYADGVGPWYSMIIEEKSSKGNIVLTDLVKDAHEAGLEVHPYTVRKDALPEY--AKDADQLLDALLNK 306 (318)
T ss_pred hhcCHHHHHHHHHhheeccCCHHHcccccCCCCccChHHHHHHHHHcCCEEEEEeccCCccccc--cCCHHHHHHHHHHh
Confidence 6532 5677888999999998877654332223346789999999999999999998732222 1233222222 355
Q ss_pred cCCCcccccccCCCC
Q 010671 372 NGDFSVDGVLSDFPL 386 (504)
Q Consensus 372 ~G~~gVDGIiTD~P~ 386 (504)
+ ||||||||+|+
T Consensus 307 ~---GVDGiiTD~P~ 318 (318)
T cd08600 307 A---GVDGVFTDFPD 318 (318)
T ss_pred c---CCcEEEcCCCC
Confidence 5 59999999996
No 7
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=8.8e-49 Score=404.09 Aligned_cols=292 Identities=16% Similarity=0.163 Sum_probs=222.3
Q ss_pred CCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCC-cCcccccccc--cccccccccccCC
Q 010671 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDL-KLDNASNIAQ--IFKTQQKNYLVNG 166 (504)
Q Consensus 90 ~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~-~l~rtT~~~~--~~~~~~~~~~vdG 166 (504)
..++||||||+++.+||||++||+.|+++||| +||||||+||||++||+||. +|+||||+.. .|+.++++..++|
T Consensus 15 ~~~~iIAHRGasg~~PEnTl~Af~~Ai~~Gad--~IE~DV~lTkDg~lVV~HD~~~L~rtTnv~~~pe~a~r~~~~~~~g 92 (356)
T cd08560 15 KTDFSIGHRGAPLQFPEHTRESYEAAARMGAG--ILECDVTFTKDRELVCRHSQCDLHTTTNILAIPELAAKCTQPFTPA 92 (356)
T ss_pred CCceEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCccccCccCCccccchhhhcccccccc
Confidence 35889999999999999999999999999999 99999999999999999997 8999999986 6889988888888
Q ss_pred CC----CCCcccccCCHHHHhcCcccCCc----------------cCCCCCCCCCCcccCCHHHHHHHhC--CCceEEee
Q 010671 167 VP----TPGWFSIDYTLNDLSNIILNQGV----------------YSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNI 224 (504)
Q Consensus 167 ~~----~~g~~v~d~Tl~EL~~l~~~~~~----------------~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEI 224 (504)
.. ..+|++.||||+||++|+++++. ..++..|++ .++||||+|+|++++ .++++|||
T Consensus 93 ~~~~~~~~~~~v~d~TlaELk~L~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~IPTL~Evl~lv~~~~v~l~iEi 171 (356)
T cd08560 93 NATKPASAECCTSDITLAEFKSLCGKMDASNPSATTPEEYQNGTPDWRTDLYAT-CGTLMTHKESIALFKSLGVKMTPEL 171 (356)
T ss_pred ccccccccCcchhhCcHHHHhcCCCccccccccccccccccccccccccccccC-CCCCCCHHHHHHHHHhcCceEEEEe
Confidence 75 56789999999999999886421 023344555 579999999999986 47899999
Q ss_pred ccchhhhcc-----chHHHHHHHHHHHhcCC----ceEecCCHHHHHHHHHhcCCCCCcE--EEEeccCCccCCCccccH
Q 010671 225 QHDAFYAQH-----NLSMRSFVLSVSRSVVV----NYISSPEVNFLRSIAARFRPSMTKL--VFRFLGKSEIEPTTNQTY 293 (504)
Q Consensus 225 K~~~~~~~~-----~~~~~~~v~~~l~~~g~----~~isSfd~~~L~~l~~~~~~~~~~l--v~~ll~~~~~~~~~~~~y 293 (504)
|++.+..+. ...+++.++++++++++ ++||||+++.|+.+++.. | ..++ ++ +..... ... ..+
T Consensus 172 K~~~~~~~~~g~~~~~~~~~~l~~~l~~~g~~~~~v~iqSFd~~~L~~~~~~~-p-~~~~~l~~-l~~~~~-~~~--~~~ 245 (356)
T cd08560 172 KSPSVPMPFDGNYTQEDYAQQMIDEYKEAGVPPSRVWPQSFNLDDIFYWIKNE-P-DFGRQAVY-LDDRDD-TAD--FPA 245 (356)
T ss_pred CCCcccccccccccHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHHHhC-C-CCCeeEEE-EccCCc-ccc--ccc
Confidence 987763321 12688999999999875 489999999999998875 3 3434 43 222211 101 111
Q ss_pred HHHHhhHHHH-HhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCC-c--c-ccC---------C
Q 010671 294 GSLLKNLTFI-KTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIP-I--S-FNY---------S 359 (504)
Q Consensus 294 ~~l~~~l~~i-~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~-~--~-~~y---------~ 359 (504)
.++ ..++.+ ..++++++|++.++++.+... ...++.+|++||++||+|++|||+++.. . . +.| .
T Consensus 246 ~~~-~~l~~i~a~~a~~i~P~~~~l~~~~~~~-~~~~~~~v~~Ah~~GL~V~~WTvr~~~~~~~~~~~~~~~~~~~~~~~ 323 (356)
T cd08560 246 TWS-PSMDELKARGVNIIAPPIWMLVDPDENG-KIVPSEYAKAAKAAGLDIITWTLERSGPLASGGGWYYQTIEDVINND 323 (356)
T ss_pred cHH-HHHHHHHhCCccEecCchhhcccccccc-ccCCHHHHHHHHHcCCEEEEEEeecCcccccCccccccccccccccc
Confidence 222 346677 457889999987776543222 2346899999999999999999987632 1 1 333 2
Q ss_pred CChHHHHHHHhhcCCCcccccccCCCCChHHHHHH
Q 010671 360 YDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 360 ~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~ 394 (504)
.|-..++..+++ ++|||||+||+|+++..|.+|
T Consensus 324 ~~~~~~~~~~~~--~~GvDGvftD~p~~~~~~~~~ 356 (356)
T cd08560 324 GDMYNVLDVLAR--DVGILGIFSDWPATVTYYANC 356 (356)
T ss_pred ccHHHHHHHHHH--hcCCCEEEccCCCceeEecCC
Confidence 333567777763 345999999999999888766
No 8
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=100.00 E-value=1.3e-46 Score=381.80 Aligned_cols=274 Identities=30% Similarity=0.410 Sum_probs=204.8
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++...++.. |....|
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~r~t~~~~~~~~~-------~~~~~~ 71 (296)
T cd08559 1 PLVIAHRGASGYAPEHTLAAYALAIEMGAD--YIEQDLVMTKDGVLVARHDPTLDRTTNVAEHFPFR-------GRKDTG 71 (296)
T ss_pred CeEEEeCCcCCCCccchHHHHHHHHHhCCC--EEEEeeEEccCCCEEEeccchhhcCCCcccccccc-------ccCCCC
Confidence 789999999999999999999999999999 99999999999999999999999999987655543 334456
Q ss_pred cccccCCHHHHhcCcccCCccC----CCCCCCCCCcccCCHHHHHHHhCC--------CceEEeeccchhhhccchHHHH
Q 010671 172 WFSIDYTLNDLSNIILNQGVYS----RTDKFDGNGFQILTVQDMARQIKP--------PGLWLNIQHDAFYAQHNLSMRS 239 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~----r~~~~~g~~~~IpTLeEvL~~~k~--------~~l~iEIK~~~~~~~~~~~~~~ 239 (504)
+.|.++||+||++++++.|+.. +.+.+.. +++||||+|+|++++. .+++||||.+......+..+++
T Consensus 72 ~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~~~~~~~~~~~l~IEiK~~~~~~~~~~~~~~ 150 (296)
T cd08559 72 YFVIDFTLAELKTLRAGSWFNQRYPERAPSYYG-GFKIPTLEEVIELAQGLNKSTGRNVGIYPETKHPTFHKQEGPDIEE 150 (296)
T ss_pred eeeecCcHHHHhcCCCCCcccccccccCccccC-CCCcCCHHHHHHHHHhhhhccCCcceEEEEecChhhhhhcCCCHHH
Confidence 7899999999999999876421 1222223 4799999999999854 5699999986554333457889
Q ss_pred HHHHHHHhcCC------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHh--hHHHHHhhhcccc
Q 010671 240 FVLSVSRSVVV------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLK--NLTFIKTFASGIL 311 (504)
Q Consensus 240 ~v~~~l~~~g~------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~--~l~~i~~~a~gi~ 311 (504)
.|+++++++++ .+|+||+++.|+++++.. | +.++++.+.......+.....|+++.. .+..++.++.+++
T Consensus 151 ~v~~~l~~~~~~~~~~~v~i~SF~~~~L~~~r~~~-p-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (296)
T cd08559 151 KLLEVLKKYGYTGKNDPVFIQSFEPESLKRLRNET-P-DIPLVQLIDYGDWAETDKKYTYAWLTTDAGLKEIAKYADGIG 228 (296)
T ss_pred HHHHHHHHcCCCCCCCCEEEecCCHHHHHHHHHhC-C-CCcEEEEecCCCCCccccccccchhcCHHHHHHHHHHhhhhC
Confidence 99999998864 389999999999999986 4 688887432211111111123333321 3455555788888
Q ss_pred cCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCC-CCccccCCCChHHHHHHHhhc-CCCcccccccCCC
Q 010671 312 VPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDN-GDFSVDGVLSDFP 385 (504)
Q Consensus 312 ~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~-~~~~~~y~~D~~~e~~~~i~~-G~~gVDGIiTD~P 385 (504)
+++..+..... .....++.+|++||++|++|++||||++ .+..++| .+++.+++++ | |||||||+|
T Consensus 229 ~~~~~~~~~~~-~~~~~~~~~v~~a~~~Gl~v~~WTvn~~~~~~~~~~----~~~~~~l~~~~G---VdgIiTD~P 296 (296)
T cd08559 229 PWKSLIIPEDS-NGLLVPTDLVKDAHKAGLLVHPYTFRNENLFLAPDF----KQDMDALYNAAG---VDGVFTDFP 296 (296)
T ss_pred CCHHhcccccc-ccccCchHHHHHHHHcCCEEEEEEecCccccccccc----ccCHHHHHHHhC---CCEEEcCCC
Confidence 87766543211 1123347899999999999999999985 2333332 3567888876 6 999999998
No 9
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=9.2e-44 Score=353.56 Aligned_cols=239 Identities=23% Similarity=0.296 Sum_probs=186.7
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCc
Q 010671 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGW 172 (504)
Q Consensus 93 ~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~ 172 (504)
+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++.. + +
T Consensus 2 ~iiaHRG~~~~~pENT~~af~~A~~~G~d--~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~-----------~------g 62 (256)
T cd08601 2 AVIAHRGASGYAPEHTFAAYDLAREMGAD--YIELDLQMTKDGVLVAMHDETLDRTTNIER-----------P------G 62 (256)
T ss_pred ceEEcCCCCCCCCCchHHHHHHHHHcCCC--EEEEEeeECCCCeEEEeCCCccccccCCCC-----------C------c
Confidence 68999999999999999999999999999 999999999999999999999999998510 1 2
Q ss_pred ccccCCHHHHhcCcccCCccCC-----CCCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHHHHHHHH
Q 010671 173 FSIDYTLNDLSNIILNQGVYSR-----TDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSR 246 (504)
Q Consensus 173 ~v~d~Tl~EL~~l~~~~~~~~r-----~~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~v~~~l~ 246 (504)
.|.++||+||++++++.++... +..+.+ ++||||+|+|+++++ .+++||||.+..+ ..+++.+.++++
T Consensus 63 ~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~--~~iptL~evl~~~~~~~~l~IEiK~~~~~----~~~~~~v~~~l~ 136 (256)
T cd08601 63 PVKDYTLAEIKQLDAGSWFNKAYPEYARESYSG--LKVPTLEEVIERYGGRANYYIETKSPDLY----PGMEEKLLATLD 136 (256)
T ss_pred eeecCcHHHHHhcCCCccccccCccccccccCC--ccCCCHHHHHHHhccCceEEEEeeCCCCC----CCHHHHHHHHHH
Confidence 6999999999999998765321 122333 799999999999864 7899999975432 156788999999
Q ss_pred hcCC---------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccc
Q 010671 247 SVVV---------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYI 317 (504)
Q Consensus 247 ~~g~---------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i 317 (504)
++++ .+|+||+++.|+.+++.. | ..++++.+.. ... + ....+ .+..++.++.++++....
T Consensus 137 ~~~~~~~~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~~~-~~~-~---~~~~~---~~~~~~~~~~~~~~~~~~- 205 (256)
T cd08601 137 KYGLLTDNLKNGQVIIQSFSKESLKKLHQLN-P-NIPLVQLLWY-GEG-A---ETYDK---WLDEIKEYAIGIGPSIAD- 205 (256)
T ss_pred HcCCCcccCCCCCEEEecCCHHHHHHHHHhC-C-CCcEEEEecc-Ccc-c---ccchh---HHHHHHhcCeEeCCchhh-
Confidence 8864 388999999999999986 4 6788864321 110 0 11111 233444456666654321
Q ss_pred cccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHH
Q 010671 318 WPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (504)
Q Consensus 318 ~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l 392 (504)
..+.+|+.+|++|++|++||+|+. +++.+++++| |||||||+|+.+.+++
T Consensus 206 ----------~~~~~v~~~~~~g~~v~~wTvn~~------------~~~~~l~~~G---vd~IiTD~p~~~~~~~ 255 (256)
T cd08601 206 ----------ADPWMVHLIHKKGLLVHPYTVNEK------------ADMIRLINWG---VDGMFTNYPDRLKEVL 255 (256)
T ss_pred ----------cCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHhcC---CCEEEeCCHHHHHHhh
Confidence 247899999999999999999753 7899999876 9999999999887765
No 10
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=100.00 E-value=1.7e-43 Score=352.10 Aligned_cols=244 Identities=19% Similarity=0.210 Sum_probs=177.2
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+++.+||||+.||+.|++.|+| +||+|||+||||++||+||.+|+|+||+. |
T Consensus 1 p~viaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lTkDg~lVv~HD~~l~R~t~~~-------------g----- 60 (263)
T cd08580 1 PLIVAHRGGTADAPENTLLAISKALANGAD--AIWLTVQLSKDGVPVLYRPSDLKSLTNGS-------------G----- 60 (263)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeEECCCCCEEEeCCCchhcccCCC-------------C-----
Confidence 689999999999999999999999999999 99999999999999999999999999953 2
Q ss_pred cccccCCHHHHhcCcccCCccCC-CCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHHHHHHhcCC
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSR-TDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r-~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~ 250 (504)
.|.++||+||++++++.|+... +..|.+..++||||+|+|+++++..++||||.+.. ..+++.++++++++++
T Consensus 61 -~v~~~t~~el~~ld~g~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~l~iEiK~~~~-----~~~~~~v~~~i~~~~~ 134 (263)
T cd08580 61 -AVSAYTAAQLATLNAGYNFKPEGGYPYRGKPVGIPTLEQVLRAFPDTPFILDMKSLPA-----DPQAKAVARVLERENA 134 (263)
T ss_pred -ChhhCcHHHHhcCCCccccccccCcccCCCCCcCccHHHHHHhhcCCeEEEEECCCCc-----HHHHHHHHHHHHhcCC
Confidence 6999999999999999876321 22355434689999999999988889999997531 2678889999999886
Q ss_pred ---ceEecCCHHHHHHHHHhcCCCC-------CcEEEEeccCCccC-CC-ccccHHH-----HHhhHHHHHhhhcccccC
Q 010671 251 ---NYISSPEVNFLRSIAARFRPSM-------TKLVFRFLGKSEIE-PT-TNQTYGS-----LLKNLTFIKTFASGILVP 313 (504)
Q Consensus 251 ---~~isSfd~~~L~~l~~~~~~~~-------~~lv~~ll~~~~~~-~~-~~~~y~~-----l~~~l~~i~~~a~gi~~~ 313 (504)
++|+||++..|+.+++.. | . .+.. ++...... +. ....... +...+..+..++-+
T Consensus 135 ~~~v~v~SF~~~~l~~~~~~~-p-~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 206 (263)
T cd08580 135 WSRVRIYSTNADYQDALAPYP-Q-ARLFESRDVTRT--RLANVAMAHQCDLPPDSGAWAGFELRRKVTVVETFTLG---- 206 (263)
T ss_pred CCCEEEEECCHHHHHHHHhcC-c-ccccccHHHHHH--HHHhhhcccccccCccchhhccccccccchheeeeccc----
Confidence 389999999999999875 3 1 1111 11100000 00 0000000 00001111111111
Q ss_pred CccccccCccccCCCCHHHHHHHHHc-CCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCCh
Q 010671 314 KDYIWPVDESLYLLPHTTIVLDAHKE-RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (504)
Q Consensus 314 ~~~i~~~~~~~~l~~~~~lV~~ahk~-Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~ 388 (504)
...+.+ .+...++.+|+.+|++ |++|++||||+. ++|++++++| |||||||+|+.+
T Consensus 207 ~~~~~~----~~~l~t~~~V~~~h~~~gl~V~~WTVN~~------------~~~~~l~~~G---VDgIiTD~P~~~ 263 (263)
T cd08580 207 EGRSPV----QATLWTPAAVDCFRRNSKVKIVLFGINTA------------DDYRLAKCLG---ADAVMVDSPAAM 263 (263)
T ss_pred cccccc----ccccCCHHHHHHHHhcCCcEEEEEEeCCH------------HHHHHHHHcC---CCEEEeCCcccC
Confidence 111111 1122357899999999 999999999864 7899999876 999999999863
No 11
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=100.00 E-value=3.2e-43 Score=349.10 Aligned_cols=233 Identities=14% Similarity=0.109 Sum_probs=177.2
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010671 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
+|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++.+.+|.+..
T Consensus 1 ~~~iiAHRG~~~~aPENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVV~HD~~l~Rtt~~~g~~~~~~~---------- 68 (252)
T cd08574 1 KPALIGHRGAPMLAPENTLMSFEKALEHGVY--GLETDVTISYDGVPFLMHDRTLRRTTNVADVFPERAH---------- 68 (252)
T ss_pred CCeEEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeEccCCcEEEeCCCcccccCCCCcccccccc----------
Confidence 4789999999999999999999999999999 9999999999999999999999999997665544332
Q ss_pred CcccccCCHHHHhcCcccCCccCCCC-------------CCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccch
Q 010671 171 GWFSIDYTLNDLSNIILNQGVYSRTD-------------KFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNL 235 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~-------------~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~ 235 (504)
+.+.++||+||++|++++|+....+ .|.+ ++||||+|+|++++ +..++||||.+........
T Consensus 69 -~~v~~~T~~eL~~ld~g~~f~~~~~~~~~~~~~~~~~~~~~~--~~IPtL~evl~~~~~~~~~l~iEiK~~~~~~~~~~ 145 (252)
T cd08574 69 -ERASMFTWTDLQQLNAGQWFLKDDPFWTASSLSESDREEAGN--QSIPSLAELLRLAKKHNKSVIFDLRRPPPNHPYYQ 145 (252)
T ss_pred -cchhcCCHHHHhhCCCCCcccCCCccchhcccccchhhhcCC--CCCCCHHHHHHHHHHcCCeEEEEecCCcccCccHH
Confidence 2689999999999999987643222 3555 79999999999996 3679999997542111123
Q ss_pred HHHHHHHHHHHhcCCc---eEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccc
Q 010671 236 SMRSFVLSVSRSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGIL 311 (504)
Q Consensus 236 ~~~~~v~~~l~~~g~~---~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~ 311 (504)
.+++.++++++++++. +++||+.. ++.+++.. | ..++.+ + ... . ...+.. -+.+++
T Consensus 146 ~~~~~v~~~l~~~~~~~~~v~~s~~~~-~~~~~~~~-p-~~~~~~-~-~~~--------~-------~~~~~~~~~~~~~ 205 (252)
T cd08574 146 SYVNITLDTILASGIPQHQVFWLPDEY-RALVRKVA-P-GFQQVS-G-RKL--------P-------VESLRENGISRLN 205 (252)
T ss_pred HHHHHHHHHHHHcCCCcccEEEccHHH-HHHHHHHC-C-CCeEee-c-ccc--------c-------hHHHHhcCCeEEc
Confidence 5788999999998862 55565544 78888886 4 566654 1 111 0 111111 234444
Q ss_pred cCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC
Q 010671 312 VPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (504)
Q Consensus 312 ~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~ 384 (504)
+.+.. ..+.+|+.+|++|++|++||||+. ++|.+++++| |||||||-
T Consensus 206 ~~~~~-----------~~~~~v~~~~~~g~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD~ 252 (252)
T cd08574 206 LEYSQ-----------LSAQEIREYSKANISVNLYVVNEP------------WLYSLLWCSG---VQSVTTNA 252 (252)
T ss_pred cCccc-----------CCHHHHHHHHHCCCEEEEEccCCH------------HHHHHHHHcC---CCEEecCc
Confidence 43221 247899999999999999999864 7899999876 99999993
No 12
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=100.00 E-value=2.9e-43 Score=358.29 Aligned_cols=248 Identities=11% Similarity=0.045 Sum_probs=184.9
Q ss_pred CCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCC
Q 010671 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (504)
Q Consensus 89 ~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~ 168 (504)
...|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+||+...+|.+.+.
T Consensus 20 ~~~~~IiAHRGa~~~aPENTl~AF~~A~~~Gad--~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~~~~~~~~~~------- 90 (316)
T cd08610 20 GPKPTIIGHRGAPMLAPENTMMSFEKAIEHGAH--GLETDVTLSYDGVPFLMHDFTLKRTTNIGEVQPESACE------- 90 (316)
T ss_pred CCCCeEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEEccCCCEEEeCCCccccccCCCCcccccccc-------
Confidence 456899999999999999999999999999999 99999999999999999999999999987655554322
Q ss_pred CCCcccccCCHHHHhcCcccCCccCC-----------C--CCCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhcc
Q 010671 169 TPGWFSIDYTLNDLSNIILNQGVYSR-----------T--DKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQH 233 (504)
Q Consensus 169 ~~g~~v~d~Tl~EL~~l~~~~~~~~r-----------~--~~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~ 233 (504)
.+.++||+||++++++.|+... + ..|.+ ++||||+|+|+++++ ..++||||.+......
T Consensus 91 ----~V~~~TlaEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~~--e~IPTLeEvL~~~~~~~~~l~IEIK~~~~~~~~ 164 (316)
T cd08610 91 ----NPAFFNWDFLSTLNAGKWFVKPRPFYNMKPLSEADKERARN--QSIPKLSNFLRLAEKENKLVIFDLYRPPPKHPY 164 (316)
T ss_pred ----chhhCCHHHHhhCCCCCccCcccccccccccccccccccCC--CCCCCHHHHHHHhHhcCceEEEEeCCCcccCcc
Confidence 6889999999999999876321 0 12344 799999999999864 5689999964221111
Q ss_pred chHHHHHHHHHH-HhcCCc--eEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcc
Q 010671 234 NLSMRSFVLSVS-RSVVVN--YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASG 309 (504)
Q Consensus 234 ~~~~~~~v~~~l-~~~g~~--~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~g 309 (504)
...+++.++..+ +++++. ++.||+...++.+++.. | +.+..+.. . . .+..+.. .+.+
T Consensus 165 ~~~~~~~v~~~i~~~~~~~~~~v~sf~~~~l~~~~~~~-P-~~~~~l~~---~--~------------~~~~l~~~~~~~ 225 (316)
T cd08610 165 RHTWIRRVLEVILNEVGIEQHLVLWLPAHDRQYVQSVA-P-GFKQHVGR---K--V------------PIETLLKNNISI 225 (316)
T ss_pred hhHHHHHHHHHHHHHcCCCCCEEEEcCHHHHHHHHHHC-c-chhhhhcc---c--c------------cHHHHHHcCCeE
Confidence 124667777776 666753 55579999999999886 3 44433211 0 0 0111211 2334
Q ss_pred cccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChH
Q 010671 310 ILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPS 389 (504)
Q Consensus 310 i~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~ 389 (504)
+++++.. ..+++|+.+|++|++|++||||+. +++.+++++| |||||||+|+.+.
T Consensus 226 l~~~~~~-----------l~~~~v~~a~~~Gl~V~vWTVNd~------------~~~~~l~~~G---VDgIiTD~P~~l~ 279 (316)
T cd08610 226 LNLAYKK-----------LFSNDIRDYKAANIHTNVYVINEP------------WLFSLAWCSG---IHSVTTNNIHLLK 279 (316)
T ss_pred Eccchhh-----------CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHhCC---cCEEEeCCHHHHH
Confidence 4443221 247899999999999999999864 7789999776 9999999999887
Q ss_pred HHHHHhh
Q 010671 390 AAVDCFA 396 (504)
Q Consensus 390 ~~l~~~~ 396 (504)
+..+...
T Consensus 280 ~~~~~~~ 286 (316)
T cd08610 280 QLDHPHF 286 (316)
T ss_pred Hhhchhh
Confidence 6654433
No 13
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=100.00 E-value=1.8e-42 Score=352.07 Aligned_cols=256 Identities=17% Similarity=0.185 Sum_probs=183.0
Q ss_pred CCCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCC
Q 010671 88 TGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (504)
Q Consensus 88 ~~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~ 167 (504)
+..+|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|+.. |
T Consensus 23 ~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVV~HD~~l~Rtt~~~-------------g- 86 (300)
T cd08612 23 SPFPCRHISHRGGSGENLENTMEAFEHAVKVGTD--MLELDVHLTKDGQVVVSHDENLLRSCGVD-------------K- 86 (300)
T ss_pred cCCCCCEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeECcCCeEEEECCccccccCCCC-------------c-
Confidence 4557999999999999999999999999999999 99999999999999999999999999843 2
Q ss_pred CCCCcccccCCHHHHhcCcccCCc-----cCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHH
Q 010671 168 PTPGWFSIDYTLNDLSNIILNQGV-----YSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVL 242 (504)
Q Consensus 168 ~~~g~~v~d~Tl~EL~~l~~~~~~-----~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~ 242 (504)
.|.++||+||++++++... ..++..|.+ ++||||+|+|+++++..++||||.+. ..+++.++
T Consensus 87 -----~V~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~g--~~IPtL~EvL~~~~~~~lnIEiK~~~------~~~~~~v~ 153 (300)
T cd08612 87 -----LVSDLNYADLPPYLEKLEVTFSPGDYCVPKGSD--RRIPLLEEVFEAFPDTPINIDIKVEN------DELIKKVS 153 (300)
T ss_pred -----ccccCCHHHHhhccccccccccCCccccccCCC--CCCCCHHHHHHhCCCCeEEEEECCCc------hHHHHHHH
Confidence 6899999999999553211 112345555 79999999999998888999999753 14778899
Q ss_pred HHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCC---------ccCCCccccHHHHHhhHHH--HHhhhc
Q 010671 243 SVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKS---------EIEPTTNQTYGSLLKNLTF--IKTFAS 308 (504)
Q Consensus 243 ~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~---------~~~~~~~~~y~~l~~~l~~--i~~~a~ 308 (504)
+++++++. .+++||+++.|+.+++.. | ..++.+.. ... ...+........+...... ++.+..
T Consensus 154 ~~i~~~~~~~~v~isSF~~~~L~~~~~~~-p-~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (300)
T cd08612 154 DLVRKYKREDITVWGSFNDEIVKKCHKEN-P-NIPLFFSL-KRVLLLLLLYYTGLLPFIPIKESFLEIPMPSIFLKTYFP 230 (300)
T ss_pred HHHHHcCCCCcEEEEeCCHHHHHHHHHhC-C-CccEEech-HHHHHHHHHHHcccCccccCccccccccchhhhhhhccc
Confidence 99999876 389999999999999986 4 67776521 100 0000000000000000000 000000
Q ss_pred c--cccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCC
Q 010671 309 G--ILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (504)
Q Consensus 309 g--i~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~ 386 (504)
. ........++. .+....+.+|+.+|++|++|++||||+. ++|.+++++| |||||||+|+
T Consensus 231 ~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~~v~vWTVNd~------------~~~~~l~~~G---VdgIiTD~P~ 292 (300)
T cd08612 231 KSMSRLNRFVLFLI---DWLLMRPSLFRHLQKRGIQVYGWVLNDE------------EEFERAFELG---ADGVMTDYPT 292 (300)
T ss_pred ccccccccceeccc---ccccCCHHHHHHHHHCCCEEEEeecCCH------------HHHHHHHhcC---CCEEEeCCHH
Confidence 0 00000001110 1122357899999999999999999864 7899999876 9999999999
Q ss_pred ChHHHHH
Q 010671 387 TPSAAVD 393 (504)
Q Consensus 387 ~~~~~l~ 393 (504)
.+.+++.
T Consensus 293 ~l~~~l~ 299 (300)
T cd08612 293 KLREFLD 299 (300)
T ss_pred HHHHHHh
Confidence 8877653
No 14
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=100.00 E-value=1.5e-42 Score=353.10 Aligned_cols=245 Identities=12% Similarity=0.097 Sum_probs=184.1
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010671 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
.|.||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+||+.+.++.+.
T Consensus 26 ~~~IIAHRGas~~aPENTl~AF~~Ai~~GaD--~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~g~~~~~~----------- 92 (315)
T cd08609 26 KPALVGHRGAPMLAPENTLMSLRKSLECGVV--VFETDVMVSKDGVPFLMHDEGLLRTTNVKDVFPGRD----------- 92 (315)
T ss_pred CCeEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEeCCCcccccCCCCCCccccc-----------
Confidence 4799999999999999999999999999999 999999999999999999999999999654222110
Q ss_pred CcccccCCHHHHhcCcccCCccCCCC-------------CCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccch
Q 010671 171 GWFSIDYTLNDLSNIILNQGVYSRTD-------------KFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNL 235 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~-------------~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~ 235 (504)
.+.|.|+||+||++++++.|+..+.+ .+.+ ++||||+|+|+++++ ..++||||.+......-.
T Consensus 93 ~~~V~dlTlaEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~g--e~IPTL~EvL~~~~~~~~~l~IEIK~~~~~~~~~~ 170 (315)
T cd08609 93 AAGSNNFTWTELKTLNAGSWFLERRPFWTLSSLSEEDRREADN--QTVPSLSELLDLAKKHNVSIMFDLRNENNSHVFYS 170 (315)
T ss_pred cccHhhCCHHHHhhCCCCcccCcccccccccccccccccccCC--CCCCCHHHHHHHHHhcCCEEEEEeCCCCCCCccHH
Confidence 12589999999999999987643211 2334 799999999999864 569999997531111123
Q ss_pred HHHHHHHHHHHhcCCc--eEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccC
Q 010671 236 SMRSFVLSVSRSVVVN--YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVP 313 (504)
Q Consensus 236 ~~~~~v~~~l~~~g~~--~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~ 313 (504)
++...++++++++++. .+.+++...++.+++.. | ..+.++.. . ....+..+..+++.
T Consensus 171 ~f~~~vl~~i~~~~~~~~~v~~~~~~~l~~~~~~~-P-~~~~~~~~---~----------------~~~~~~~~~~i~~~ 229 (315)
T cd08609 171 SFVFYTLETILKLGIPPDKVWWLPDEYRHDVMKME-P-GFKQVYGR---Q----------------KEMLMDGGNFMNLP 229 (315)
T ss_pred HHHHHHHHHHHHcCCCcceEEEeCHHHHHHHHHhC-c-Cceeeccc---c----------------hhhHhcCCeEEecc
Confidence 6778899999999852 33345788899998876 3 45555311 0 00011123334443
Q ss_pred CccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010671 314 KDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 314 ~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
+.. ....+|+.+|++|++|++||||++ +++++++++| |||||||+|+.+.+.++
T Consensus 230 ~~~-----------l~~~~v~~~~~~G~~v~vWTVNd~------------~~~~~l~~~G---VDgIiTD~P~~l~~~~~ 283 (315)
T cd08609 230 YQD-----------LSALEIKELRKDNVSVNLWVVNEP------------WLFSLLWCSG---VSSVTTNACQLLKDMSK 283 (315)
T ss_pred ccc-----------CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHhcC---CCEEEcCCHHHHHHhhh
Confidence 221 246799999999999999999854 7899999876 99999999998888886
Q ss_pred Hhhh
Q 010671 394 CFAH 397 (504)
Q Consensus 394 ~~~~ 397 (504)
.+..
T Consensus 284 ~~~~ 287 (315)
T cd08609 284 PIWL 287 (315)
T ss_pred hhhh
Confidence 5543
No 15
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=100.00 E-value=1.6e-42 Score=356.71 Aligned_cols=241 Identities=13% Similarity=0.108 Sum_probs=180.7
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010671 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
+|+||||||+++.+||||++||++|++.|+| +||+|||+||||++||+||.+|+||||+.+.++++..+
T Consensus 1 ~p~IIAHRGas~~aPENTL~AF~~A~~~GaD--~IElDV~lTkDGvlVV~HD~tL~RtTn~~g~v~~~~~~--------- 69 (351)
T cd08608 1 KPAIIGHRGAPMLAPENTLMSFQKALEQKVY--GLQADVTISLDGVPFLMHDRTLRRTTNVDRVFPERQYE--------- 69 (351)
T ss_pred CCeEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCccccccCCCCcccccccc---------
Confidence 4789999999999999999999999999999 99999999999999999999999999987655543322
Q ss_pred CcccccCCHHHHhcCcccCCccCCCC-------------CCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccch
Q 010671 171 GWFSIDYTLNDLSNIILNQGVYSRTD-------------KFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNL 235 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~-------------~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~ 235 (504)
.+.++||+||++++++.|+..+.+ .+.+ ++||||+|+|+++++ ..++||||.+........
T Consensus 70 --~~~~~TlaEL~~LdaG~wf~~~~p~~~~~~~~~~~~~~~~g--e~IPTL~EvL~~~~~~~~~l~iEIK~~~~~~~~~~ 145 (351)
T cd08608 70 --DASMFNWTDLERLNAGQWFLKDDPFWTAQSLSPSDRKEAGN--QSVCSLAELLELAKRYNASVLLNLRRPPPNHPYHQ 145 (351)
T ss_pred --ccccCCHHHHhhCCCCcccccCCccccccccccccccccCC--CCCCCHHHHHHHHHhcCCeEEEEECCCcccCcchh
Confidence 468999999999999987643221 3444 799999999999864 568999996532111223
Q ss_pred HHHHHHHHHHHhcCC----ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhccc
Q 010671 236 SMRSFVLSVSRSVVV----NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGI 310 (504)
Q Consensus 236 ~~~~~v~~~l~~~g~----~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi 310 (504)
.+++.+++++++++. ++++||+. ++.+++.. | ..++.. ... . ....++. -+.++
T Consensus 146 ~~~~~v~~~i~~~~~~~~~vi~sSf~~--~~~vr~l~-P-~~~~~~---~~~--~------------~~~~~~~~~~~~l 204 (351)
T cd08608 146 SWINLTLKTILASGIPQEQVMWTPDWQ--RKLVRKVA-P-GFQQTS---GEK--L------------PVASLRERGITRL 204 (351)
T ss_pred HHHHHHHHHHHHhCCCcCeEEEEcchH--HHHHHHHC-C-CCeeec---ccc--c------------hHHHHHHcCCeEE
Confidence 567788888888775 25577765 46788775 3 444321 100 0 0112221 23444
Q ss_pred ccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHH
Q 010671 311 LVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (504)
Q Consensus 311 ~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~ 390 (504)
++.+.. ..+.+|+.+|++|++|++||||++ .+|.+++++| |||||||+|+.+.+
T Consensus 205 ~~~~~~-----------lt~~~v~~~~~~Gl~V~vWTVN~~------------~~~~~l~~~G---VdgIiTD~P~~l~~ 258 (351)
T cd08608 205 NLRYTQ-----------ASAQEIRDYSASNLSVNLYTVNEP------------WLYSLLWCSG---VPSVTSDASHVLRK 258 (351)
T ss_pred ccchhh-----------cCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHHCC---CCEEEECCHHHHHH
Confidence 544322 247899999999999999999864 6789999776 99999999998887
Q ss_pred HHH
Q 010671 391 AVD 393 (504)
Q Consensus 391 ~l~ 393 (504)
...
T Consensus 259 l~~ 261 (351)
T cd08608 259 VPF 261 (351)
T ss_pred hhh
Confidence 664
No 16
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=100.00 E-value=3.1e-42 Score=341.43 Aligned_cols=231 Identities=16% Similarity=0.143 Sum_probs=174.2
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010671 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
.|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++. |
T Consensus 7 ~~~iiaHRG~~~~~pENT~~Af~~A~~~G~d--~vE~DV~lT~Dg~lVV~HD~~l~R~t~~~-------------~---- 67 (249)
T PRK09454 7 YPRIVAHRGGGKLAPENTLAAIDVGARYGHR--MIEFDAKLSADGEIFLLHDDTLERTSNGW-------------G---- 67 (249)
T ss_pred CCeEEECCCCCCCCChHHHHHHHHHHHcCCC--EEEEEeeECCCCCEEEECCCcccccCCCC-------------C----
Confidence 5899999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred CcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010671 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
.|.|+||+||++++++.++ .+.|.+ ++||||+|||++++ +..++||||....... .+...+..+.+..
T Consensus 68 --~v~~~t~~el~~l~~~~~~---~~~~~~--~~iPtL~evl~~~~~~~~~l~iEiK~~~~~~~---~~~~~v~~~~~~~ 137 (249)
T PRK09454 68 --VAGELTWQDLAQLDAGSWF---SAAFAG--EPLPTLSQVAARCRAHGMAANIEIKPTTGREA---ETGRVVALAARAL 137 (249)
T ss_pred --chhhCCHHHHHhcCCCCcc---CCCCCC--CcCCCHHHHHHHHHhcCCEEEEEECCCCCcch---hHHHHHHHHHHHH
Confidence 6899999999999998764 345665 79999999999985 3668999996422111 2223333333332
Q ss_pred --C---CceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCc
Q 010671 249 --V---VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDE 322 (504)
Q Consensus 249 --g---~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~ 322 (504)
+ ..+++||++..|+.+++.. | ..++.+.+ . . . ...+ ...+... +..+++.+.
T Consensus 138 ~~~~~~~v~v~SF~~~~l~~l~~~~-p-~~~~~~l~-~-~-~----~~~~------~~~~~~~~~~~~~~~~~------- 195 (249)
T PRK09454 138 WAGAAVPPLLSSFSEDALEAARQAA-P-ELPRGLLL-D-E-W----PDDW------LELTRRLGCVSLHLNHK------- 195 (249)
T ss_pred hcCCCCCEEEEeCCHHHHHHHHHhC-C-CCcEEEEe-c-c-c----cccH------HHHHHhcCCeEEecccc-------
Confidence 2 3589999999999999986 4 67887633 1 1 0 0111 1111211 222333221
Q ss_pred cccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHH
Q 010671 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (504)
Q Consensus 323 ~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~ 391 (504)
...+.+++.+|++|++|++||+|++ +++.+++++| ||||+||+|+.+..+
T Consensus 196 ----~~~~~~v~~~~~~g~~v~~WTvn~~------------~~~~~l~~~G---VdgIiTD~p~~~~~~ 245 (249)
T PRK09454 196 ----LLDEARVAALKAAGLRILVYTVNDP------------ARARELLRWG---VDCICTDRIDLIGPD 245 (249)
T ss_pred ----cCCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEeCChHhcCcc
Confidence 1257899999999999999999864 6789999876 999999999976544
No 17
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3.7e-42 Score=336.85 Aligned_cols=222 Identities=16% Similarity=0.222 Sum_probs=163.3
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++. | .
T Consensus 1 iiaHRG~~~~~PENTl~Af~~A~~~gad--~iE~DV~lTkDg~~Vv~HD~~l~r~t~~~-------------~------~ 59 (229)
T cd08581 1 LVAHRGYPARYPENTLVGFRAAVDAGAR--FVEFDVQLSADGVPVVFHDDTLLRLTGVE-------------G------L 59 (229)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHcCCC--EEEEeeeECCCCcEEEECCCccccccCCC-------------c------e
Confidence 6899999999999999999999999999 99999999999999999999999999853 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC---CceEEeeccchhhhccchHHHHHHHHHHHhc--
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV-- 248 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~---~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~-- 248 (504)
+.++||+||+++++..+. .++..|.+ ++||||+|+|+++++ .+++||||.+..... .+.+.+..+++..
T Consensus 60 v~~~t~~el~~l~~~~~~-~~~~~~~~--~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~---~~~~~v~~~~~~~~~ 133 (229)
T cd08581 60 LHELEDAELDSLRVAEPA-RFGSRFAG--EPLPSLAAVVQWLAQHPQVTLFVEIKTESLDRF---GLERVVDKVLRALPA 133 (229)
T ss_pred eccCCHHHHhhcccccCc-ccccccCC--ccCCCHHHHHHHHhhCCCceEEEEecCCccccc---chhHHHHHHHHHHHh
Confidence 899999999999775321 13455665 799999999999864 579999997643221 2233334444433
Q ss_pred --CCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccC
Q 010671 249 --VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYL 326 (504)
Q Consensus 249 --g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l 326 (504)
...+|+||++..|+++++. + ..++.+.+ ... .. .. .. .+..+++ .++.+... +
T Consensus 134 ~~~~~~i~SF~~~~l~~~r~~--~-~~~~~~l~-~~~--~~------~~----~~----~~~~~~~--~~~~~~~~---~ 188 (229)
T cd08581 134 VAAQRVLISFDYDLLALAKQQ--G-GPRTGWVL-PDW--DD------AS----LA----EADELQP--DYLFCDKN---L 188 (229)
T ss_pred ccCCeEEEeCCHHHHHHHHhc--C-CCCeEEEe-ccC--Ch------HH----HH----HHHhhCC--CEEecccc---c
Confidence 2358899999999999998 3 56777633 110 00 00 11 1111222 11111100 1
Q ss_pred CCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 327 ~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
...++.+|++|++|++||||++ +++.+++++| |||||||+|
T Consensus 189 ---~~~v~~~~~~G~~v~vWTVn~~------------~~~~~l~~~G---VdgiiTD~P 229 (229)
T cd08581 189 ---LPDTGDLWAGTWKWVIYEVNEP------------AEALALAARG---VALIETDNI 229 (229)
T ss_pred ---ChhhHHHHhCCceEEEEEcCCH------------HHHHHHHHhC---CcEEEcCCC
Confidence 1358889999999999999864 7899999876 999999998
No 18
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=100.00 E-value=1.2e-41 Score=332.16 Aligned_cols=222 Identities=20% Similarity=0.230 Sum_probs=174.4
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++. | .
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~gad--~iE~Dv~~TkDg~lvv~HD~~l~r~t~~~-------------~------~ 59 (229)
T cd08562 1 IIAHRGASSLAPENTLAAFRAAAELGVR--WVEFDVKLSGDGTLVLIHDDTLDRTTNGS-------------G------A 59 (229)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCC--EEEEEEeECCCCCEEEEcCCCCccccCCC-------------c------e
Confidence 6899999999999999999999999999 99999999999999999999999999853 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHHHHHHHhcCC-
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~- 250 (504)
+.++||+||++++++.+. .+.|.+ ++||||+|+|++++ +..++||||.+... ...+++.+++++++++.
T Consensus 60 i~~lt~~el~~l~~~~~~---~~~~~~--~~iptl~evl~~~~~~~~~l~iEiK~~~~~---~~~~~~~v~~~l~~~~~~ 131 (229)
T cd08562 60 VTELTWAELAQLDAGSWF---SPEFAG--EPIPTLADVLELARELGLGLNLEIKPDPGD---EALTARVVAAALRELWPH 131 (229)
T ss_pred eecCcHHHHhhcCCCccc---CCCCCC--CCCCCHHHHHHHHHhcCCEEEEEECCCCCc---cHHHHHHHHHHHHHhcCC
Confidence 899999999999988653 344554 79999999999996 36799999975432 23567788899988865
Q ss_pred ---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCccccC
Q 010671 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLYL 326 (504)
Q Consensus 251 ---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~~~l 326 (504)
.+++||+++.|+.+++.. | ..++++.. ... + ..+. ..++.. +.++.+.+..
T Consensus 132 ~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~---~---~~~~------~~~~~~~~~~~~~~~~~---------- 186 (229)
T cd08562 132 ASKLLLSSFSLEALRAARRAA-P-ELPLGLLF-DTL---P---ADWL------ELLAALGAVSIHLNYRG---------- 186 (229)
T ss_pred cCCEEEECCCHHHHHHHHHhC-C-CCcEEEEe-cCC---C---cCHH------HHHHHcCCeEEecChhh----------
Confidence 389999999999999986 4 57777632 111 0 1111 111111 2333332221
Q ss_pred CCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 327 ~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
...++|+.+|++|++|++||+|+. +++.+++++| ||||+||+|
T Consensus 187 -~~~~~v~~~~~~g~~v~~wTvn~~------------~~~~~~~~~g---VdgiiTD~p 229 (229)
T cd08562 187 -LTEEQVKALKDAGYKLLVYTVNDP------------ARAAELLEWG---VDAIFTDRP 229 (229)
T ss_pred -CCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHCC---CCEEEcCCC
Confidence 246899999999999999999864 6788999776 999999998
No 19
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=100.00 E-value=1.6e-41 Score=339.16 Aligned_cols=244 Identities=21% Similarity=0.224 Sum_probs=176.1
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++. |
T Consensus 1 p~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~-------------~----- 60 (264)
T cd08575 1 PLHIAHRGGAAEFPENTIAAFRHAVKNGAD--MLELDVQLTKDGQVVVFHDWDLDRLTGGS-------------G----- 60 (264)
T ss_pred CeEEEeCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEEcCCcccceeCCc-------------e-----
Confidence 789999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred cccccCCHHHHhcCcccCCccCC------CCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHHHHH
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSR------TDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVS 245 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r------~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l 245 (504)
.+.++|++||++++++.++... ...+. .++||||+|+|+.+++..++||||.+.. ..+++.+++++
T Consensus 61 -~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~--~~~iptL~evl~~~~~~~l~iEiK~~~~-----~~~~~~v~~~i 132 (264)
T cd08575 61 -LVSDLTYAELPPLDAGYGYTFDGGKTGYPRGGG--DGRIPTLEEVFKAFPDTPINIDIKSPDA-----EELIAAVLDLL 132 (264)
T ss_pred -EEecCCHHHHHhcccCCccccCCCCcccccCCC--CCcCCcHHHHHHhCCCCeEEEEECCCCH-----HHHHHHHHHHH
Confidence 6899999999999998765211 11233 3799999999999988889999997542 36788999999
Q ss_pred HhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHH-hh---HHHHHhhhcccccCCcccc
Q 010671 246 RSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLL-KN---LTFIKTFASGILVPKDYIW 318 (504)
Q Consensus 246 ~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~-~~---l~~i~~~a~gi~~~~~~i~ 318 (504)
+++++ .+++||+++.|+++++.. | +.++.+.+ . ... ..|..+. .. ....+..+-.+.+....+.
T Consensus 133 ~~~~~~~~~~~~Sf~~~~l~~~~~~~-p-~~~~~~~~-~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (264)
T cd08575 133 EKYKREDRTVWGSTNPEYLRALHPEN-P-NLFESFSM-T-RCL-----LLYLALGYTGLLPFVPIKESFFEIPRPVIVLE 203 (264)
T ss_pred HhccccceEEEEeCCHHHHHHHHHhC-c-ccccccCc-h-hHH-----HHHHHhheeccCCCCCCCceEEEeecccEEEE
Confidence 99876 389999999999999885 3 34443211 0 000 0000000 00 0000000001111100000
Q ss_pred -------ccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCCh
Q 010671 319 -------PVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (504)
Q Consensus 319 -------~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~ 388 (504)
.... .+....+.+|+.+|++|++|++||+|+. +++.+++++| |||||||+|+.+
T Consensus 204 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~G~~v~vWTVNd~------------~~~~~l~~~G---VdgIiTD~P~~~ 264 (264)
T cd08575 204 TFTLGEGASIV-AALLWWPNLFDHLRKRGIQVYLWVLNDE------------EDFEEAFDLG---ADGVMTDSPTKL 264 (264)
T ss_pred Eeccccccchh-hhhhcCHHHHHHHHhcCCcEEEEEECCH------------HHHHHHHhcC---CCEEEeCCcccC
Confidence 0000 1122357899999999999999999864 7899999876 999999999853
No 20
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=100.00 E-value=7.1e-41 Score=327.63 Aligned_cols=224 Identities=22% Similarity=0.320 Sum_probs=177.2
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
++||||||+++.+||||++||+.|++.|++ +||||||+||||++||+||.+|+|+|++. |
T Consensus 1 ~~iiaHRG~~~~~pENT~~Af~~A~~~g~~--~vE~DV~~TkDg~~Vv~HD~~l~r~t~~~-------------~----- 60 (230)
T cd08563 1 TLIFAHRGYSGTAPENTLLAFKKAIEAGAD--GIELDVHLTKDGQLVVIHDETVDRTTNGK-------------G----- 60 (230)
T ss_pred CeEEEccCCCCCCCchhHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCCcccccCCC-------------C-----
Confidence 479999999999999999999999999999 99999999999999999999999999843 2
Q ss_pred cccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHHHHHHHhcC
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g 249 (504)
.+.++||+||++++++.++. +.+.+ ++||||+|+|++++ +..++||+|.+.... ..+++.+++++++++
T Consensus 61 -~i~~~t~~el~~l~~~~~~~---~~~~~--~~iptL~evl~~~~~~~~~l~leiK~~~~~~---~~~~~~l~~~l~~~~ 131 (230)
T cd08563 61 -YVKDLTLEELKKLDAGSWFD---EKFTG--EKIPTLEEVLDLLKDKDLLLNIEIKTDVIHY---PGIEKKVLELVKEYN 131 (230)
T ss_pred -chhhCCHHHHHhcCCCCccC---ccCCC--CcCCCHHHHHHHHHhcCcEEEEEECCCCCcC---hhHHHHHHHHHHHcC
Confidence 68999999999999987642 33443 69999999999986 467999999754321 357888999999987
Q ss_pred C---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCcccc
Q 010671 250 V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLY 325 (504)
Q Consensus 250 ~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~~~ 325 (504)
+ .+++||+++.++.+++.. | ..++.+.. . ..... ....++.. +.++.+.+.
T Consensus 132 ~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~-~-~~~~~-----------~~~~~~~~~~~~v~~~~~---------- 186 (230)
T cd08563 132 LEDRVIFSSFNHESLKRLKKLD-P-KIKLALLY-E-TGLQD-----------PKDYAKKIGADSLHPDFK---------- 186 (230)
T ss_pred CCCCEEEEcCCHHHHHHHHHHC-C-CCcEEEEe-c-CcccC-----------HHHHHHHhCCEEEccCch----------
Confidence 5 388999999999999986 4 57777632 1 11110 01112211 233444322
Q ss_pred CCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 326 l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
...+.+++.+|++|++|++||+|+. +++.+++++| ||||+||+|
T Consensus 187 -~~~~~~i~~~~~~g~~v~~Wtvn~~------------~~~~~~~~~G---Vdgi~TD~P 230 (230)
T cd08563 187 -LLTEEVVEELKKRGIPVRLWTVNEE------------EDMKRLKDLG---VDGIITNYP 230 (230)
T ss_pred -hcCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHHCC---CCEEeCCCC
Confidence 1257899999999999999999753 7899999876 999999998
No 21
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=8e-41 Score=327.89 Aligned_cols=226 Identities=19% Similarity=0.229 Sum_probs=177.2
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|++ +||||||+||||++||+||.+++|+|+.. | .
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~~--~vE~Dv~lTkDg~~Vv~HD~~l~r~t~~~-------------~------~ 59 (233)
T cd08582 1 VIAHRGASAEAPENTLAAFELAWEQGAD--GIETDVRLTKDGELVCVHDPTLKRTSGGD-------------G------A 59 (233)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCC--EEEEEEEEccCCCEEEecCCccccccCCC-------------c------c
Confidence 6899999999999999999999999999 99999999999999999999999999853 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHhcC-C
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV-V 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g-~ 250 (504)
+.++||+||++++++.++ ...|.+ ++||||+|+|+++++ ..++||||.+. .+..+++.+++++++++ .
T Consensus 60 i~~~t~~el~~l~~~~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~ieiK~~~----~~~~~~~~~~~~~~~~~~~ 130 (233)
T cd08582 60 VSDLTLAELRKLDIGSWK---GESYKG--EKVPTLEEYLAIVPKYGKKLFIEIKHPR----RGPEAEEELLKLLKESGLL 130 (233)
T ss_pred hhhCCHHHHhcCCCCccc---CCCCCC--CcCCCHHHHHHHHHhcCceEEEEeCCCc----cCccHHHHHHHHHHHcCCC
Confidence 899999999999988754 344554 799999999999865 67999999751 12367888999999884 2
Q ss_pred ---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHH-hhhcccccCCccccccCccccC
Q 010671 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYL 326 (504)
Q Consensus 251 ---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~-~~a~gi~~~~~~i~~~~~~~~l 326 (504)
.+++||++..++.+++.. | +.++.|...... ..... ...++ ..+.++.+.+..
T Consensus 131 ~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~~~~~--~~~~~---------~~~~~~~~~~~i~~~~~~---------- 187 (233)
T cd08582 131 PEQIVIISFDAEALKRVRELA-P-TLETLWLRNYKS--PKEDP---------RPLAKSGGAAGLDLSYEK---------- 187 (233)
T ss_pred CCCEEEEecCHHHHHHHHHHC-C-CCcEEEEeccCc--cccch---------hHHHHhhCceEEcccccc----------
Confidence 389999999999999986 4 677776331111 00000 00111 124445543221
Q ss_pred CCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCC
Q 010671 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (504)
Q Consensus 327 ~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~ 387 (504)
...+.+|+.+|++|++|++||+|+. +++.+++++| ||||+||+|+.
T Consensus 188 ~~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---Vdgi~TD~p~~ 233 (233)
T cd08582 188 KLNPAFIKALRDAGLKLNVWTVDDA------------EDAKRLIELG---VDSITTNRPGR 233 (233)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHCC---CCEEEcCCCCC
Confidence 1257899999999999999999864 7889999776 99999999973
No 22
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3.6e-41 Score=331.10 Aligned_cols=228 Identities=17% Similarity=0.170 Sum_probs=172.5
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|+.. | .
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~~TkDg~~Vv~HD~~l~r~t~~~-------------g------~ 59 (235)
T cd08565 1 IAGHRGGRNLWPENTLEGFRKALELGVD--AVEFDVHLTADGEVVVIHDPTLDRTTHGT-------------G------A 59 (235)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEeEEEccCCCEEEECCChhhcccCCC-------------C------c
Confidence 6899999999999999999999999999 99999999999999999999999999843 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHhcCC-
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~- 250 (504)
|.|+|++||++++++.+. | ++||||+|+|+++++ ..++||||.+... .....+++.++++++++++
T Consensus 60 v~~~t~~el~~l~~~~~~--------~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~~~~~~~~~v~~~i~~~~~~ 128 (235)
T cd08565 60 VRDLTLAERKALRLRDSF--------G--EKIPTLEEVLALFAPSGLELHVEIKTDADG-TPYPGAAALAAATLRRHGLL 128 (235)
T ss_pred eeeccHHHHhcCCCCCCC--------C--CCCCCHHHHHHHhhccCcEEEEEECCCCCC-CccHHHHHHHHHHHHhCCCc
Confidence 999999999999988642 3 699999999999853 5799999975311 1123578889999999886
Q ss_pred --ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHH-hhhcccccCCccccccCccccCC
Q 010671 251 --NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYLL 327 (504)
Q Consensus 251 --~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~-~~a~gi~~~~~~i~~~~~~~~l~ 327 (504)
.+|+||+++.|+.+++. + ..++++. ............. .+.... ..+.++.++.... .
T Consensus 129 ~~v~~~Sf~~~~l~~~~~~-p--~~~~~~l-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------~ 189 (235)
T cd08565 129 ERSVLTSFDPAVLTEVRKH-P--GVRTLGS-VDEDMLERLGGEL------PFLTATALKAHIVAVEQSLL---------A 189 (235)
T ss_pred CCEEEEECCHHHHHHHHhC-C--CCcEEEE-ecccccccccccc------chhhhhhccCcEEccCcccc---------c
Confidence 38999999999999997 3 6788763 3211100000000 001111 1133333322210 1
Q ss_pred CCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCCh
Q 010671 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (504)
Q Consensus 328 ~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~ 388 (504)
....+|+.+|+ |++|++||+|++ ++|.+++++| |||||||+|+.+
T Consensus 190 ~~~~~v~~~~~-g~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD~P~~~ 234 (235)
T cd08565 190 ATWELVRAAVP-GLRLGVWTVNDD------------SLIRYWLACG---VRQLTTDRPDLA 234 (235)
T ss_pred CCHHHHHHHhC-CCEEEEEccCCH------------HHHHHHHHcC---CCEEEeCCcccc
Confidence 24678999974 999999999854 7899999876 999999999865
No 23
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=4.7e-41 Score=335.94 Aligned_cols=249 Identities=19% Similarity=0.214 Sum_probs=182.4
Q ss_pred CCcEEEEeCCCCCC--CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCC
Q 010671 90 DPPFVVARGGFSGI--FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (504)
Q Consensus 90 ~~p~viaHRG~~~~--~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~ 167 (504)
.+|+||||||+++. +||||++||+.|++.|+| +||+|||+||||++||+||.++++++.... ++.+ +|
T Consensus 2 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~~~~~~~~~~----~~~~---~~- 71 (265)
T cd08564 2 VRPIIVGHRGAGCSTLYPENTLPSFRRALEIGVD--GVELDVFLTKDNEIVVFHGTEDDTNPDTSI----QLDD---SG- 71 (265)
T ss_pred CCceEEEeCCCCCCCCCCchhHHHHHHHHHcCCC--EEEEeeEECCCCCEEEEcCCccccCccccc----cccC---CC-
Confidence 36899999999988 999999999999999999 999999999999999999998776332100 0000 11
Q ss_pred CCCCcccccCCHHHHhcCcccCCccCCC---CCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHHHHH
Q 010671 168 PTPGWFSIDYTLNDLSNIILNQGVYSRT---DKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLS 243 (504)
Q Consensus 168 ~~~g~~v~d~Tl~EL~~l~~~~~~~~r~---~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~v~~ 243 (504)
...|.|+|++||++++++.++..++ ..+. +++||||+|+|+++++ .+++||||.+. ..+++.+++
T Consensus 72 ---~~~v~~~t~~el~~l~~~~~~~~~~~~~~~~~--~~~iptL~evl~~~~~~~~l~iEiK~~~------~~~~~~v~~ 140 (265)
T cd08564 72 ---FKNINDLSLDEITRLHFKQLFDEKPCGADEIK--GEKIPTLEDVLVTFKDKLKYNIELKGRE------VGLGERVLN 140 (265)
T ss_pred ---ccchhhCcHHHHhhcccCcccccCcccccccC--CccCCCHHHHHHHhccCcEEEEEeCCCc------hhHHHHHHH
Confidence 1379999999999999988764321 1233 4799999999999965 67999999753 257789999
Q ss_pred HHHhcCC---ceEecCCH-HHHHHHHHhcCCCC---CcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccccCCc
Q 010671 244 VSRSVVV---NYISSPEV-NFLRSIAARFRPSM---TKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKD 315 (504)
Q Consensus 244 ~l~~~g~---~~isSfd~-~~L~~l~~~~~~~~---~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~ 315 (504)
++++++. .+|+||++ +.++.+++.. | . .++++.+ .... .+ .+.+. +..++. .+.++.+.+.
T Consensus 141 ~l~~~~~~~~v~i~SF~~~~~l~~~~~~~-~-~~~~~~~~~l~-~~~~-~~----~~~~~---~~~~~~~~~~~v~~~~~ 209 (265)
T cd08564 141 LVEKYGMILQVHFSSFLHYDRLDLLKALR-P-NKLNVPIALLF-NEVK-SP----SPLDF---LEQAKYYNATWVNFSYD 209 (265)
T ss_pred HHHHcCCCCCEEEEecCchhHHHHHHHhC-c-CCCCceEEEEe-cCCC-Cc----ccccH---HHHHHhcCCceeeechh
Confidence 9999986 48999999 9999998886 3 3 6777633 2111 00 00111 122221 1344444322
Q ss_pred cccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHH
Q 010671 316 YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (504)
Q Consensus 316 ~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l 392 (504)
. + .+.+|+.+|++|++|++||.+.- .|+.+++.+++++| ||||+||+|+.+.+++
T Consensus 210 ~---------~--~~~~v~~~~~~Gl~v~~wT~~~~--------~n~~~~~~~l~~~G---vdgiiTD~p~~~~~~~ 264 (265)
T cd08564 210 F---------W--TEEFVKKAHENGLKVMTYFDEPV--------NDNEEDYKVYLELG---VDCICPNDPVLLVNFL 264 (265)
T ss_pred h---------h--hHHHHHHHHHcCCEEEEecCCCC--------CCCHHHHHHHHHcC---CCEEEcCCHHHHHHhh
Confidence 2 1 36899999999999999993210 13458899999876 9999999999988775
No 24
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=100.00 E-value=9.3e-41 Score=326.15 Aligned_cols=220 Identities=18% Similarity=0.150 Sum_probs=167.6
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCc
Q 010671 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGW 172 (504)
Q Consensus 93 ~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~ 172 (504)
+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|+.. |
T Consensus 1 ~iiaHRG~~~~~pENTl~af~~A~~~Gad--~iE~DV~lT~Dg~~Vv~HD~~l~R~t~~~-------------g------ 59 (226)
T cd08568 1 IILGHRGYRAKYPENTLEAFKKAIEYGAD--GVELDVWLTKDGKLVVLHDENLKRVGGVD-------------L------ 59 (226)
T ss_pred CEEeccCCCCCCCcchHHHHHHHHHcCcC--EEEEEEEEcCCCCEEEECCCcccccCCCC-------------c------
Confidence 48999999999999999999999999999 99999999999999999999999999843 2
Q ss_pred ccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHHHHHHHHhcCC-
Q 010671 173 FSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (504)
Q Consensus 173 ~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~- 250 (504)
.|.++|++||++++++ | ++||||+|||+++++ ..++||||.+. .++.++++++++++
T Consensus 60 ~v~~~t~~eL~~l~~~-----------g--~~iPtL~evl~~~~~~~~l~iEiK~~~--------~~~~~~~~l~~~~~~ 118 (226)
T cd08568 60 KVKELTYKELKKLHPG-----------G--ELIPTLEEVFRALPNDAIINVEIKDID--------AVEPVLEIVEKFNAL 118 (226)
T ss_pred eeecCCHHHHhhCCCC-----------C--CcCCCHHHHHHhcCCCcEEEEEECCcc--------HHHHHHHHHHHcCCC
Confidence 6999999999999864 2 689999999999875 67999999642 35678888998875
Q ss_pred --ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccccCCccccccCccccCC
Q 010671 251 --NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLL 327 (504)
Q Consensus 251 --~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~~i~~~~~~~~l~ 327 (504)
.+++||+++.|+.+++.. | ..++.+.. .... +. ... ....+. .+..+.++...+- .. . ..
T Consensus 119 ~~v~i~SF~~~~l~~~~~~~-p-~~~~~~l~-~~~~--~~--~~~------~~~~~~~~~~~~~~~~~~~~-~~--~-~~ 181 (226)
T cd08568 119 DRVIFSSFNHDALRELRKLD-P-DAKVGLLI-GEEE--EG--FSI------PELHEKLKLYSLHVPIDAIG-YI--G-FE 181 (226)
T ss_pred CcEEEEECCHHHHHHHHHhC-C-CCcEEEEe-eccc--cc--cCH------HHHHHhcCCcEeccchhhhc-cc--c-cc
Confidence 489999999999999986 4 67777633 2110 00 000 011111 1233444322210 00 0 11
Q ss_pred CCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCC
Q 010671 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (504)
Q Consensus 328 ~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~ 387 (504)
..+.+|+.+|++|++|++||+|+. +++.++.+ + |||||||+|+.
T Consensus 182 ~~~~~v~~~~~~G~~v~~WTvn~~------------~~~~~l~~-~---vdgiiTD~p~~ 225 (226)
T cd08568 182 KFVELLRLLRKLGLKIVLWTVNDP------------ELVPKLKG-L---VDGVITDDVEK 225 (226)
T ss_pred ccHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHh-h---CCEEEccCccc
Confidence 147899999999999999999853 66777663 3 99999999985
No 25
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=100.00 E-value=8.2e-41 Score=325.08 Aligned_cols=215 Identities=17% Similarity=0.245 Sum_probs=172.0
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|+.. | .
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~Gad--~vE~DV~~T~Dg~~vv~HD~~l~r~t~~~-------------~------~ 59 (220)
T cd08579 1 IIAHRGVSSNGVENTLEALEAAIKAKPD--YVEIDVQETKDGQFVVMHDANLKRLAGVN-------------K------K 59 (220)
T ss_pred CeeccCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEEcCCchhhccCCC-------------C------C
Confidence 6899999999999999999999999999 99999999999999999999999999853 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHhcCC-
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~- 250 (504)
+.++||+||++++++++ +. .++||||+|+|+++++ ..++||||.+.. ....+.+.++++++++++
T Consensus 60 v~~~t~~el~~l~~~~~-------~~--~~~iptL~evl~~~~~~~~~l~iEiK~~~~---~~~~~~~~v~~~l~~~~~~ 127 (220)
T cd08579 60 VWDLTLEELKKLTIGEN-------GH--GAKIPSLDEYLALAKGLKQKLLIELKPHGH---DSPDLVEKFVKLYKQNLIE 127 (220)
T ss_pred hhhCCHHHHhcCcCccC-------CC--CCcCCCHHHHHHHhhccCCeEEEEECCCCC---CCHHHHHHHHHHHHHcCCC
Confidence 89999999999998764 23 3699999999999964 679999997642 223678889999998875
Q ss_pred --ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCCC
Q 010671 251 --NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLP 328 (504)
Q Consensus 251 --~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~ 328 (504)
.+|+||++..++.+++.. | ..++.+.. ... .. . +. ...+..+++.+. ..
T Consensus 128 ~~v~v~Sf~~~~l~~~~~~~-p-~~~~~~~~-~~~-~~--------~----~~--~~~~~~~~~~~~-----------~~ 178 (220)
T cd08579 128 NQHQVHSLDYRVIEKVKKLD-P-KIKTGYIL-PFN-IG--------N----LP--KTNVDFYSIEYS-----------TL 178 (220)
T ss_pred cCeEEEeCCHHHHHHHHHHC-C-CCeEEEEE-ecc-cC--------c----cc--ccCceEEeeehh-----------hc
Confidence 389999999999999876 4 56777632 111 00 0 00 011333333221 12
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
...+|+.+|++|++|++||+|+. +++.+++++| ||||+||+|
T Consensus 179 ~~~~v~~~~~~G~~v~~wtvn~~------------~~~~~~~~~G---vd~i~TD~P 220 (220)
T cd08579 179 NKEFIRQAHQNGKKVYVWTVNDP------------DDMQRYLAMG---VDGIITDYP 220 (220)
T ss_pred CHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CCEEeCCCC
Confidence 47899999999999999999754 7889999876 999999998
No 26
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3.4e-40 Score=328.44 Aligned_cols=242 Identities=20% Similarity=0.196 Sum_probs=177.1
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCC--CCC
Q 010671 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV--PTP 170 (504)
Q Consensus 93 ~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~--~~~ 170 (504)
.||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|+... +|+ +..
T Consensus 2 ~iiaHRG~~~~~pENT~~Af~~A~~~Gad--~vE~DV~~TkDg~~Vv~HD~~l~r~~~r~~-----------~~~~~~~~ 68 (263)
T cd08567 2 DLQGHRGARGLLPENTLPAFAKALDLGVD--TLELDLVLTKDGVIVVSHDPKLNPDITRDP-----------DGAWLPYE 68 (263)
T ss_pred ceEeccCCCCCCCcchHHHHHHHHHcCCC--EEEEEEEEcCCCCEEEeCCCccCcceeecC-----------CCCccccc
Confidence 58999999999999999999999999999 999999999999999999999998763210 121 112
Q ss_pred CcccccCCHHHHhcCcccCCccCC--CCCCCC----CCcccCCHHHHHHHhCC-----CceEEeeccchhhh---ccchH
Q 010671 171 GWFSIDYTLNDLSNIILNQGVYSR--TDKFDG----NGFQILTVQDMARQIKP-----PGLWLNIQHDAFYA---QHNLS 236 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r--~~~~~g----~~~~IpTLeEvL~~~k~-----~~l~iEIK~~~~~~---~~~~~ 236 (504)
++.|.|+||+||++++++.+.... ...|.. ..++||||+|+|+++++ ..++||+|.+.... .....
T Consensus 69 ~~~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 148 (263)
T cd08567 69 GPALYELTLAEIKQLDVGEKRPGSDYAKLFPEQIPVPGTRIPTLEEVFALVEKYGNQKVRFNIETKSDPDRDILHPPPEE 148 (263)
T ss_pred CcchhcCCHHHHHhcCCCccccCcCcccCCCccccCccccCCCHHHHHHHHHHhccCCceEEEEEcCCCCccccCccHHH
Confidence 347999999999999988764111 122211 02689999999999964 67999999754321 11346
Q ss_pred HHHHHHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hccccc
Q 010671 237 MRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILV 312 (504)
Q Consensus 237 ~~~~v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~ 312 (504)
+++.++++++++++ ++|+||+++.++.+++.. | +.++++.. .... . ..+. ..++.. +..+.+
T Consensus 149 ~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~~-~----~~~~------~~~~~~~~~~~~~ 214 (263)
T cd08567 149 FVDAVLAVIRKAGLEDRVVLQSFDWRTLQEVRRLA-P-DIPTVALT-EETT-L----GNLP------RAAKKLGADIWSP 214 (263)
T ss_pred HHHHHHHHHHHcCCCCceEEEeCCHHHHHHHHHHC-C-CccEEEEe-cCCc-c----cCHH------HHHHHhCCcEEec
Confidence 78899999999876 388999999999999886 3 67777633 2110 0 0111 111111 122222
Q ss_pred CCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCC
Q 010671 313 PKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (504)
Q Consensus 313 ~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~ 387 (504)
.. ....+.+++.+|++|+.|++||+|+. +++.+++++| ||||+||+|++
T Consensus 215 ~~-----------~~~~~~~i~~~~~~G~~v~vwtvn~~------------~~~~~~~~~G---vdgi~TD~P~~ 263 (263)
T cd08567 215 YF-----------TLVTKELVDEAHALGLKVVPWTVNDP------------EDMARLIDLG---VDGIITDYPDL 263 (263)
T ss_pred ch-----------hhcCHHHHHHHHHCCCEEEEecCCCH------------HHHHHHHHcC---CCEEEcCCCCC
Confidence 11 12257899999999999999999753 6788899876 99999999974
No 27
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3e-40 Score=334.57 Aligned_cols=251 Identities=17% Similarity=0.147 Sum_probs=181.4
Q ss_pred EEEEeCCCC--------CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCccccccccccccccccccc
Q 010671 93 FVVARGGFS--------GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLV 164 (504)
Q Consensus 93 ~viaHRG~~--------~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~v 164 (504)
+||||||++ +.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++...+
T Consensus 1 ~viaHRG~~~~~~~~~~~~~pENTl~Af~~A~~~Gad--~vE~DV~lTkDG~lVv~HD~~l~r~~~~~~~~--------- 69 (293)
T cd08572 1 LVIGHRGLGKNYASGSLAGIRENTIASFLAAAKHGAD--MVEFDVQLTKDGVPVIYHDFTISVSEKSKTGS--------- 69 (293)
T ss_pred CceEecCCCCCcCcccccCcCcccHHHHHHHHHcCCC--EEEEEEEEccCCeEEEEcCCcceeeccccccc---------
Confidence 589999997 79999999999999999999 99999999999999999999999999864321
Q ss_pred CCCCCCCcccccCCHHHHhcCcccCCccCCCCC---------------CCCCCcccCCHHHHHHHhCC-CceEEeeccch
Q 010671 165 NGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDK---------------FDGNGFQILTVQDMARQIKP-PGLWLNIQHDA 228 (504)
Q Consensus 165 dG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~---------------~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~ 228 (504)
++....++++.++|++||++++++++...+++. +. .++||||+|+|+++++ .+++||||.+.
T Consensus 70 ~~~~g~~~~v~~lT~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~iptL~evL~~~~~~~~l~IEiK~~~ 147 (293)
T cd08572 70 DEGELIEVPIHDLTLEQLKELGLQHISALKRKALTRKAKGPKPNPWGMDE--HDPFPTLQEVLEQVPKDLGFNIEIKYPQ 147 (293)
T ss_pred ccCcceeeehhhCcHHHHHhccccccccccccccccccccCCccccchhh--ccCCCCHHHHHHhCCCccceEEEEecCC
Confidence 222223458999999999999998764322111 22 3689999999999864 77999999765
Q ss_pred hhhcc---------chHHHHHHHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccC-CCccccHHH
Q 010671 229 FYAQH---------NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIE-PTTNQTYGS 295 (504)
Q Consensus 229 ~~~~~---------~~~~~~~v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~-~~~~~~y~~ 295 (504)
..... ...+++.+++++++++. ++++||++..|+.+++.. | ..+++|.+ ...... +.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~vl~~i~~~~~~~~vv~~SF~~~~l~~l~~~~-p-~~~~~~l~-~~~~~~~~~~~~~~~- 223 (293)
T cd08572 148 LLEDGEGELTPYFERNAFVDTILAVVFEHAGGRRIIFSSFDPDICIMLRLKQ-N-KYPVLFLT-NGGTNEVEHMDPRRR- 223 (293)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHhhC-c-cCCEEEEe-cCCCCcccccchhhh-
Confidence 33210 12578889999999876 489999999999999986 4 68888743 211100 00000000
Q ss_pred HHhhHHHHHhhh-----cccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHh
Q 010671 296 LLKNLTFIKTFA-----SGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFI 370 (504)
Q Consensus 296 l~~~l~~i~~~a-----~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i 370 (504)
.+..+..++ .++.+...+ +...+.+|+.+|++|+.|++||++|+ ..+++.+++
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~~Gl~v~~wTv~~n----------~~~~~~~l~ 281 (293)
T cd08572 224 ---SLQAAVNFALAEGLLGVVLHAED---------LLKNPSLISLVKALGLVLFTYGDDNN----------DPENVKKQK 281 (293)
T ss_pred ---hHHHHHHHHHHCCCeEEEechHH---------hhcCcHHHHHHHHcCcEEEEECCCCC----------CHHHHHHHH
Confidence 122222222 233332222 12246899999999999999999432 136788999
Q ss_pred hcCCCcccccccCCC
Q 010671 371 DNGDFSVDGVLSDFP 385 (504)
Q Consensus 371 ~~G~~gVDGIiTD~P 385 (504)
++| |||||||+|
T Consensus 282 ~~G---VdgIiTD~~ 293 (293)
T cd08572 282 ELG---VDGVIYDRV 293 (293)
T ss_pred HcC---CCEEEecCC
Confidence 876 999999997
No 28
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=100.00 E-value=5.6e-40 Score=326.95 Aligned_cols=231 Identities=15% Similarity=0.146 Sum_probs=172.5
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++. | .
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~Gad--~iE~DV~lTkDg~~Vv~HD~~l~R~t~~~-------------g------~ 59 (258)
T cd08573 1 IIGHRGAGHDAPENTLAAFRQAKKNGAD--GVEFDLEFTKDGVPVLMHDDTVDRTTDGT-------------G------L 59 (258)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeECCCCcEEEECCCCcceecCCC-------------c------e
Confidence 6899999999999999999999999999 99999999999999999999999999853 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHHHHHHHhcC-C
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV-V 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g-~ 250 (504)
|.|+||+||++++++.+.. ....|.+ ++||||+|+|++++ +..++||||.+.. .+++.+++++++++ .
T Consensus 60 v~~~t~~el~~l~~~~~~~-~~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~------~~~~~v~~~l~~~~~~ 130 (258)
T cd08573 60 VAELTWEELRKLNAAAKHR-LSSRFPG--EKIPTLEEAVKECLENNLRMIFDVKSNSS------KLVDALKNLFKKYPGL 130 (258)
T ss_pred EecCcHHHHhhCCCCCCCC-CccccCC--CCCCCHHHHHHHHHhcCCEEEEEeCCCcH------HHHHHHHHHHHHCCCc
Confidence 8999999999999987642 2234655 79999999999985 3679999997531 56788899999888 4
Q ss_pred ---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCC----ccc---cHHHHHh-hHHHHHh-----------hhc
Q 010671 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPT----TNQ---TYGSLLK-NLTFIKT-----------FAS 308 (504)
Q Consensus 251 ---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~----~~~---~y~~l~~-~l~~i~~-----------~a~ 308 (504)
.+++||++..|+++++.. | ..++.+ +......... ... .+..... .+..+.. -++
T Consensus 131 ~~~v~v~SF~~~~l~~~~~~~-p-~~~~g~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (258)
T cd08573 131 YDKAIVCSFNPIVIYKVRKAD-P-KILTGL-TWRPWFLSYTDDEGGPRRKSGWKHFLYSMLDVILEWSLHSWLPYFLGVS 207 (258)
T ss_pred cCCEEEEECCHHHHHHHHHhC-C-CceEEE-ecCcchhcccccccCcccchHHHHHHHHHHHHHHHHHHHhhhhhhcCee
Confidence 489999999999999986 4 577775 3221100000 000 0111000 0111110 012
Q ss_pred ccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhh-cCCCcccccccCC
Q 010671 309 GILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFID-NGDFSVDGVLSDF 384 (504)
Q Consensus 309 gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~-~G~~gVDGIiTD~ 384 (504)
.+++.+. ..++.+|+.+|++|++|++||||++ +++.++++ +| || ||||+
T Consensus 208 ~v~~~~~-----------~~~~~~v~~~~~~G~~v~vWTVn~~------------~~~~~l~~~~G---Vd-iiTD~ 257 (258)
T cd08573 208 ALLIHKD-----------DISSAYVRYWRARGIRVIAWTVNTP------------TEKQYFAKTLN---VP-YITDS 257 (258)
T ss_pred EEEechH-----------hcCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHHHhC---CC-eecCC
Confidence 2222111 1257899999999999999999854 78999998 76 99 99997
No 29
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=100.00 E-value=6.3e-40 Score=331.74 Aligned_cols=255 Identities=15% Similarity=0.102 Sum_probs=175.7
Q ss_pred EEEEeCCCC-------CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccC
Q 010671 93 FVVARGGFS-------GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVN 165 (504)
Q Consensus 93 ~viaHRG~~-------~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vd 165 (504)
+.|||||++ +.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|+.....+
T Consensus 1 ~~iaHRG~~~~~~~~~~~~PENTl~af~~A~~~Gad--~iE~DV~lTkDg~~VV~HD~~l~r~~~~~~~~~--------- 69 (290)
T cd08607 1 LDVGHRGAGNSYTAASAVVRENTIASFLQAAEHGAD--MVEFDVQLTKDLVPVVYHDFTLRVSLKSKGDSD--------- 69 (290)
T ss_pred CceecCCCCcCcccccCCCCccHHHHHHHHHHcCCC--EEEEEEEEccCCeEEEEcCCeeEeeccCccccC---------
Confidence 479999984 89999999999999999999 999999999999999999999999988532111
Q ss_pred CCCCCCcccccCCHHHHhcCcccCCccCCCCCCCC--------CCcccCCHHHHHHHhC-CCceEEeeccchhhhcc---
Q 010671 166 GVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDG--------NGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQH--- 233 (504)
Q Consensus 166 G~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g--------~~~~IpTLeEvL~~~k-~~~l~iEIK~~~~~~~~--- 233 (504)
+.+..++.|.|+||+||++++++.+..+..+.|.+ ..++||||+|+|++++ ..+++||||.+......
T Consensus 70 ~~~~~~~~v~~lt~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~~lnIEiK~~~~~~~~~~~ 149 (290)
T cd08607 70 RDDLLEVPVKDLTYEQLKLLKLFHISALKVKEYKSVEEDEDPPEHQPFPTLSDVLESVPEDVGFNIEIKWPQQQKDGSWE 149 (290)
T ss_pred ccceEEEecccCCHHHHhhcCcccccccccccccccccccccccccCCCCHHHHHHhCCCccceEEEEecCccccccccc
Confidence 11122357999999999999987543222233320 1368999999999986 46799999976422110
Q ss_pred --------chHHHHHHHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCc--cCCCccccHHHHHhhH
Q 010671 234 --------NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSE--IEPTTNQTYGSLLKNL 300 (504)
Q Consensus 234 --------~~~~~~~v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~--~~~~~~~~y~~l~~~l 300 (504)
...+++.+++++++++. .+|+||++..|+.++++. | ..++++.. .... ..+........+...+
T Consensus 150 ~~~~~~~~~~~~~~~v~~~i~~~~~~~~v~isSF~~~~l~~~~~~~-p-~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 226 (290)
T cd08607 150 SELFTYFDRNLFVDIILKIVLEHAGKRRIIFSSFDADICTMLRFKQ-N-KYPVLFLT-QGKTQRYPEFMDLRTRTFEIAV 226 (290)
T ss_pred cccccccchhHHHHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHHhC-c-CCCEEEEe-cCCCCccccccchHHHhHHHHH
Confidence 01367788888887764 489999999999999986 4 67887632 2111 0000000000000011
Q ss_pred HHHHhh-hcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecC--CCCCCccccCCCChHHHHHHHhhcCCCcc
Q 010671 301 TFIKTF-ASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNF--ANDIPISFNYSYDPLTEYLSFIDNGDFSV 377 (504)
Q Consensus 301 ~~i~~~-a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv--~n~~~~~~~y~~D~~~e~~~~i~~G~~gV 377 (504)
...... +.++.++.. ++...+.+|+.+|++|++|++||+ |+ .+++.+++++| |
T Consensus 227 ~~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~~~Gl~v~~wTv~~n~------------~~~~~~l~~~G---V 282 (290)
T cd08607 227 NFAQAEELLGVNLHSE---------DLLKDPSQIELAKSLGLVVFCWGDDLND------------PENRKKLKELG---V 282 (290)
T ss_pred HHHHHcCCceeEechh---------hhhcChHHHHHHHHcCCEEEEECCCCCC------------HHHHHHHHHcC---C
Confidence 111111 122222211 122357899999999999999999 43 36789999876 9
Q ss_pred cccccCCC
Q 010671 378 DGVLSDFP 385 (504)
Q Consensus 378 DGIiTD~P 385 (504)
||||||++
T Consensus 283 dgIiTD~~ 290 (290)
T cd08607 283 DGLIYDRI 290 (290)
T ss_pred CEEEecCC
Confidence 99999986
No 30
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=100.00 E-value=7.4e-40 Score=321.43 Aligned_cols=219 Identities=19% Similarity=0.216 Sum_probs=167.5
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+++|+|++. |..
T Consensus 1 iiAHRG~~~~~pENT~~af~~a~~~g~d--~vE~Dv~lTkDg~~vv~HD~~l~R~t~~~------------------~~~ 60 (234)
T cd08570 1 VIGHRGYKAKYPENTLLAFEKAVEAGAD--AIETDVHLTKDGVVVISHDPNLKRCFGKD------------------GLI 60 (234)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHhCCC--EEEEEeeEccCCcEEEeCCCccceeeCCC------------------CCE
Confidence 6899999999999999999999999999 99999999999999999999999999853 126
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC-----CCceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK-----PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k-----~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
+.++|++||++++++.. + .++||||+|+|++++ +..++||||.... ...++..+.++++++
T Consensus 61 v~~~t~~eL~~l~~~~~---------~-~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~----~~~~~~~v~~~i~~~ 126 (234)
T cd08570 61 IDDSTWDELSHLRTIEE---------P-HQPMPTLKDVLEWLVEHELPDVKLMLDIKRDND----PEILFKLIAEMLAVK 126 (234)
T ss_pred eccCCHHHHhhcccccC---------C-CccCCcHHHHHHHHHhcCCCCeEEEEEECCCCC----HHHHHHHHHHHHHhc
Confidence 89999999999987641 2 358999999999985 3568999996431 135667788888876
Q ss_pred C-------CceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh---hcccccCCcccc
Q 010671 249 V-------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF---ASGILVPKDYIW 318 (504)
Q Consensus 249 g-------~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~---a~gi~~~~~~i~ 318 (504)
+ ..+|+||++..++.+++.. | +.++++.... . .. ...+..+ +.++.+....++
T Consensus 127 ~~~~~~~~~v~i~Sf~~~~l~~l~~~~-p-~~~~~~l~~~-~----------~~----~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T cd08570 127 PDLDFWRERIILGLWHLDFLKYGKEVL-P-GFPVFHIGFS-L----------DY----ARHFLNYSEKLVGISMHFVSLW 189 (234)
T ss_pred CCcccccCCEEEEeCCHHHHHHHHHhC-C-CCCeEEEEcC-H----------HH----HHHHhccccccceEEeeeehhh
Confidence 4 2388999999999999986 4 5777652211 0 00 0011111 223333221111
Q ss_pred ccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 319 PVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 319 ~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
. . ..+++++.+|++|++|++||+|++ .++.+++++| ||||+||+|
T Consensus 190 ~------~-~~~~~v~~~~~~gl~v~~wTvn~~------------~~~~~l~~~g---vdgiiTD~P 234 (234)
T cd08570 190 G------P-FGQAFLPELKKNGKKVFVWTVNTE------------EDMRYAIRLG---VDGVITDDP 234 (234)
T ss_pred c------c-cCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHHCC---CCEEEeCCC
Confidence 0 0 257899999999999999999864 6789999876 999999998
No 31
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=1e-39 Score=323.27 Aligned_cols=240 Identities=21% Similarity=0.237 Sum_probs=176.7
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||+.||+.|++.|+| +||||||+||||++||+||.+|+|+|++. | .
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~g~d--~vE~Dv~~TkDg~~Vv~HD~~l~r~t~~~-------------~------~ 59 (249)
T cd08561 1 VIAHRGGAGLAPENTLLAFEDAVELGAD--VLETDVHATKDGVLVVIHDETLDRTTDGT-------------G------P 59 (249)
T ss_pred CcccCCCCCCCCccHHHHHHHHHHhCCC--EEEEEeeECCCCCEEEECCCccccccCCC-------------C------c
Confidence 6899999999999999999999999999 99999999999999999999999999853 2 6
Q ss_pred cccCCHHHHhcCcccCCccCCC---CCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHHHHHHhcCC
Q 010671 174 SIDYTLNDLSNIILNQGVYSRT---DKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~---~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~ 250 (504)
+.++||+||++++++.++...+ ..+....+++|||+|+|+++++..++||+|.+. ..+++.+++++++++.
T Consensus 60 i~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~ieiK~~~------~~~~~~~~~~l~~~~~ 133 (249)
T cd08561 60 VADLTLAELRRLDAGYHFTDDGGRTYPYRGQGIRIPTLEELFEAFPDVRLNIEIKDDG------PAAAAALADLIERYGA 133 (249)
T ss_pred hhhCCHHHHhhcCcCccccCccccccccCCCCccCCCHHHHHHhCcCCcEEEEECCCc------hhHHHHHHHHHHHcCC
Confidence 8999999999999887642111 111112379999999999998888999999753 2578889999999875
Q ss_pred ---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHh-hHHH-HHhhhcccccCCccccccCcccc
Q 010671 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLK-NLTF-IKTFASGILVPKDYIWPVDESLY 325 (504)
Q Consensus 251 ---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~-~l~~-i~~~a~gi~~~~~~i~~~~~~~~ 325 (504)
.+++||+.+.|+.+++.. | ..++.+.. .. .. .+..... .+.. ......++.++..+. .+
T Consensus 134 ~~~~~~~Sf~~~~l~~~~~~~-p-~~~~~~~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 197 (249)
T cd08561 134 QDRVLVASFSDRVLRRFRRLC-P-RVATSAGE--GE-VA-----AFVLASRLGLGSLYSPPYDALQIPVRYG------GV 197 (249)
T ss_pred CCcEEEEECCHHHHHHHHHHC-C-CcceeccH--HH-HH-----HHHHHhhcccccccCCCCcEEEcCcccC------Ce
Confidence 488999999999999986 3 45655411 00 00 0000000 0000 000011122111110 01
Q ss_pred CCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHH
Q 010671 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (504)
Q Consensus 326 l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~ 391 (504)
....+.+++.+|++|++|++||||+. +++.+++++| ||||+||+|+++.++
T Consensus 198 ~~~~~~~v~~~~~~G~~v~vWTVN~~------------~~~~~l~~~g---VdgIiTD~p~~~~~~ 248 (249)
T cd08561 198 PLVTPRFVRAAHAAGLEVHVWTVNDP------------AEMRRLLDLG---VDGIITDRPDLLLEV 248 (249)
T ss_pred ecCCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHhcC---CCEEEcCCHHHHHhh
Confidence 12357899999999999999999754 7889999876 999999999987754
No 32
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=100.00 E-value=1.9e-39 Score=327.74 Aligned_cols=248 Identities=16% Similarity=0.174 Sum_probs=177.2
Q ss_pred cEEEEeCCCCCCCC--------chHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccc
Q 010671 92 PFVVARGGFSGIFP--------DSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYL 163 (504)
Q Consensus 92 p~viaHRG~~~~~p--------EnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~ 163 (504)
++||||||+++.+| |||++||+.|++.|+| +||+|||+||||++||+||.+|+|+ +..
T Consensus 2 ~~iiaHRG~~~~~p~~~~~~~pENTl~af~~A~~~g~d--~vE~DV~lTkDg~~VV~HD~~l~rt-~~~----------- 67 (286)
T cd08606 2 VQVIGHRGLGKNTAERKSLQLGENTVESFILAASLGAS--YVEVDVQLTKDLVPVIYHDFLVSET-GTD----------- 67 (286)
T ss_pred ceEEEeCCCCCCcccccccCcCcchHHHHHHHHHcCCC--EEEEEEEEccCCEEEEeCCCeeccC-CCC-----------
Confidence 67999999999999 9999999999999999 9999999999999999999999985 421
Q ss_pred cCCCCCCCcccccCCHHHHhcCccc---CCccCCCCCCC----CC--CcccCCHHHHHHHhCC-CceEEeeccchhhhcc
Q 010671 164 VNGVPTPGWFSIDYTLNDLSNIILN---QGVYSRTDKFD----GN--GFQILTVQDMARQIKP-PGLWLNIQHDAFYAQH 233 (504)
Q Consensus 164 vdG~~~~g~~v~d~Tl~EL~~l~~~---~~~~~r~~~~~----g~--~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~ 233 (504)
| .|.|+|++||++++.. .++ ++..|. |. +++||||+|+|+.+++ .+++||||.+......
T Consensus 68 --~------~v~~lt~~eL~~ld~~~~~~~~--~~~~~~~~~~g~~~~~~iptL~evl~~~~~~~~l~IEiK~~~~~~~~ 137 (286)
T cd08606 68 --V------PIHDLTLEQFLHLSRMKYTVDF--KKKGFKGNSRGHSIQAPFTTLEELLKKLPKSVGFNIELKYPMLHEAE 137 (286)
T ss_pred --C------ccccCCHHHHHhhhcccccccc--cccCCCCcccccccccCCCcHHHHHHhCCCccceEEEEecCCcchhh
Confidence 2 6899999999998743 221 122232 31 1469999999999864 6799999976432210
Q ss_pred ----------chHHHHHHHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhH
Q 010671 234 ----------NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNL 300 (504)
Q Consensus 234 ----------~~~~~~~v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l 300 (504)
...+++.+++++++++. .+|+||+++.|+.+++.. | ..++.+. +... ..+....... .+
T Consensus 138 ~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~vi~sSF~~~~l~~~~~~~-p-~~~~~~l-~~~~-~~~~~~~~~~----~~ 209 (286)
T cd08606 138 EEEVAPVAIELNAFVDTVLEKVFDYGAGRNIIFSSFTPDICILLSLKQ-P-GYPVLFL-TEAG-KAPDMDVRAA----SL 209 (286)
T ss_pred hcccccchhHHHHHHHHHHHHHHhcCCCCceEEEcCCHHHHHHHHhhC-c-CCCEEEE-eCCC-CCccCCchhh----cH
Confidence 01466789999999875 488999999999999986 3 6788763 2211 1110000000 01
Q ss_pred HHHHhhh-----cccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCC
Q 010671 301 TFIKTFA-----SGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375 (504)
Q Consensus 301 ~~i~~~a-----~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~ 375 (504)
.....++ .++.++..+ +...+.+|+.+|++|++|++||+.++ ..+++.+++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~~Gl~v~~WTv~~n----------~~~~~~~l~~~G-- 268 (286)
T cd08606 210 QEAIRFAKQWNLLGLVSAAEP---------LVMCPRLIQVVKRSGLVCVSYGVLNN----------DPENAKTQVKAG-- 268 (286)
T ss_pred HHHHHHHHHCCCeEEEechHH---------hhhChHHHHHHHHCCcEEEEECCccC----------CHHHHHHHHHcC--
Confidence 1111122 222222111 12247899999999999999999321 136788999876
Q ss_pred cccccccCCCCChHHHHH
Q 010671 376 SVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 376 gVDGIiTD~P~~~~~~l~ 393 (504)
|||||||+|+.+++.++
T Consensus 269 -VdgIiTD~p~~~~~~~~ 285 (286)
T cd08606 269 -VDAVIVDSVLAIRRGLT 285 (286)
T ss_pred -CCEEEECCHHHHHHHhc
Confidence 99999999999887763
No 33
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=100.00 E-value=7.6e-39 Score=315.58 Aligned_cols=233 Identities=20% Similarity=0.159 Sum_probs=171.4
Q ss_pred EEEEeCCCCCC-CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 93 FVVARGGFSGI-FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 93 ~viaHRG~~~~-~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
+||||||+++. +||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++. |
T Consensus 1 ~iiaHRG~~~~~~pENTl~af~~A~~~g~d--~iE~DV~~T~Dg~~vv~HD~~l~r~t~~~-------------~----- 60 (240)
T cd08566 1 LVVAHRGGWGAGAPENSLAAIEAAIDLGAD--IVEIDVRRTKDGVLVLMHDDTLDRTTNGK-------------G----- 60 (240)
T ss_pred CeEecCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCCCccccCCC-------------C-----
Confidence 48999999999 999999999999999999 99999999999999999999999999853 2
Q ss_pred cccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHHHHHHHHhcCC
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~ 250 (504)
.+.++||+||++++++.+. ..|.+ ++||||+|+|+++++ ..++||+|.+ ..+.+++++++++.
T Consensus 61 -~v~~~t~~el~~l~~~~~~----~~~~~--~~iptL~evl~~~~~~~~l~iEiK~~---------~~~~~~~~~~~~~~ 124 (240)
T cd08566 61 -KVSDLTLAEIRKLRLKDGD----GEVTD--EKVPTLEEALAWAKGKILLNLDLKDA---------DLDEVIALVKKHGA 124 (240)
T ss_pred -chhhCcHHHHHhCCcCCCc----CCCCC--CCCCCHHHHHHhhhcCcEEEEEECch---------HHHHHHHHHHHcCC
Confidence 6899999999999998764 34554 799999999999875 6799999964 24668888888876
Q ss_pred ---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCC
Q 010671 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLL 327 (504)
Q Consensus 251 ---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~ 327 (504)
.+|+||+.+.++.+++.. | ..++++.+ ... .. . ..........+.+ ..+.+. ....
T Consensus 125 ~~~v~~~sf~~~~l~~~~~~~-p-~~~~~~l~-~~~--~~--~---------~~~~~~~~~~~~~--~~~~~~---~~~~ 183 (240)
T cd08566 125 LDQVIFKSYSEEQAKELRALA-P-EVMLMPIV-RDA--ED--L---------DEEEARAIDALNL--LAFEIT---FDDL 183 (240)
T ss_pred cccEEEEECCHHHHHHHHHhC-C-CCEEEEEE-ccC--cc--h---------hHHHHhcccccce--EEEEEe---cccc
Confidence 389999999999999986 4 56766532 211 00 0 0000011111111 001110 0000
Q ss_pred CCHHHHHHHHHc-CCeEEEecCCCCCCccc-cCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 328 PHTTIVLDAHKE-RLEVFASNFANDIPISF-NYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 328 ~~~~lV~~ahk~-Gl~V~~wTv~n~~~~~~-~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
.....+..+|+. |++|++||+|.+..... .+..|+..++.+++++| ||||+||+|
T Consensus 184 ~~~~~~~~~~~~~Gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~~~G---vd~I~TD~P 240 (240)
T cd08566 184 DLPPLFDELLRALGIRVWVNTLGDDDTAGLDRALSDPREVWGELVDAG---VDVIQTDRP 240 (240)
T ss_pred ccHHHHHHHHHhCCCEEEEECCCcccccchhhhhhCchhHHHHHHHcC---CCEEecCCC
Confidence 135688888887 99999999986421100 01123467899999876 999999998
No 34
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=100.00 E-value=2.8e-38 Score=318.61 Aligned_cols=246 Identities=16% Similarity=0.109 Sum_probs=170.3
Q ss_pred EEEeCCCCC-C----------CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCccccccccccccccccc
Q 010671 94 VVARGGFSG-I----------FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNY 162 (504)
Q Consensus 94 viaHRG~~~-~----------~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~ 162 (504)
||||||+.. . +||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++..
T Consensus 2 ~ighrg~~~~~~~~~~~~~~~~~ENTl~Af~~A~~~Gad--~vE~DV~lTkDg~~VV~HD~~l~r~~~g~~--------- 70 (282)
T cd08605 2 VIGHRGLGMNRASHQPSVGPGIRENTIASFIAASKFGAD--FVEFDVQVTRDGVPVIWHDDFIVVERGGEV--------- 70 (282)
T ss_pred eEeccCCCcCcccccccccCCCCCcHHHHHHHHHHcCCC--EEEEEEEECcCCeEEEECCCceecccCCCc---------
Confidence 799999655 3 459999999999999999 999999999999999999999999988310
Q ss_pred ccCCCCCCCcccccCCHHHHhcCcccCCccC--------C--CCC----CCCCCcccCCHHHHHHHhCC-CceEEeeccc
Q 010671 163 LVNGVPTPGWFSIDYTLNDLSNIILNQGVYS--------R--TDK----FDGNGFQILTVQDMARQIKP-PGLWLNIQHD 227 (504)
Q Consensus 163 ~vdG~~~~g~~v~d~Tl~EL~~l~~~~~~~~--------r--~~~----~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~ 227 (504)
.+ ..|.|+||+||++++++.+... + .+. +...+++||||+|+|+.++. .+++||||.+
T Consensus 71 -~~------~~V~dlT~~EL~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~~l~IEiK~~ 143 (282)
T cd08605 71 -ES------SRIRDLTLAELKALGPQAESTKTSTVALYRKAKDPEPEPWIMDVEDSIPTLEEVFSEVPPSLGFNIELKFG 143 (282)
T ss_pred -Cc------cchhhCcHHHHHhccccccccccCcchhhccccccccccccccccCCCCCHHHHHHhCCCCccEEEEEecC
Confidence 01 2699999999999998765311 0 000 11114799999999999865 5799999975
Q ss_pred hhhhccc---hHHHHHHHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHH
Q 010671 228 AFYAQHN---LSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLT 301 (504)
Q Consensus 228 ~~~~~~~---~~~~~~v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~ 301 (504)
....... ..+++.+++++++++. .+|+||+++.|+.++++. | ..++.+. +........... -..+.....
T Consensus 144 ~~~~~~~~~~~~~~~~v~~~i~~~~~~~~viisSF~~~~l~~l~~~~-p-~~~~~~L-~~~~~~~~~~~~-~~~~~~~~~ 219 (282)
T cd08605 144 DDNKTEAEELVRELRAILAVCKQHAPGRRIMFSSFDPDAAVLLRALQ-S-LYPVMFL-TDCGPYTHNDPR-RNSIEAAIQ 219 (282)
T ss_pred ccccchHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhcC-c-cCCEEEE-ecCCCccccCch-hhhHHHHHH
Confidence 4221100 1235678888888765 489999999999999986 4 6788863 321100000000 000000011
Q ss_pred HHHh-hhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecC--CCCCCccccCCCChHHHHHHHhhcCCCccc
Q 010671 302 FIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNF--ANDIPISFNYSYDPLTEYLSFIDNGDFSVD 378 (504)
Q Consensus 302 ~i~~-~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv--~n~~~~~~~y~~D~~~e~~~~i~~G~~gVD 378 (504)
.++. .+.++.+++.. +...+.+|+.+|++|++|++||+ |+ .++|.+++++| ||
T Consensus 220 ~~~~~~~~~~~~~~~~---------l~~~~~~v~~~~~~Gl~v~vWTv~~n~------------~~~~~~l~~~G---Vd 275 (282)
T cd08605 220 VALEGGLQGIVSEVKV---------LLRNPTAVSLVKASGLELGTYGKLNND------------AEAVERQADLG---VD 275 (282)
T ss_pred HHHHcCCceEEecHHH---------hhcCcHHHHHHHHcCcEEEEeCCCCCC------------HHHHHHHHHcC---CC
Confidence 1111 13344443221 11246799999999999999998 54 37899999876 99
Q ss_pred ccccCCC
Q 010671 379 GVLSDFP 385 (504)
Q Consensus 379 GIiTD~P 385 (504)
|||||+|
T Consensus 276 gIiTD~~ 282 (282)
T cd08605 276 GVIVDHV 282 (282)
T ss_pred EEEeCCC
Confidence 9999986
No 35
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=100.00 E-value=4.6e-37 Score=309.10 Aligned_cols=257 Identities=13% Similarity=0.149 Sum_probs=177.5
Q ss_pred ccccCCCCCcEEEEeCCCCCCC----------------------CchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEe
Q 010671 83 RWQTLTGDPPFVVARGGFSGIF----------------------PDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICF 140 (504)
Q Consensus 83 ~~~~~~~~~p~viaHRG~~~~~----------------------pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~ 140 (504)
.+.......|+||||||.++.| ||||++||+.|++.|+| +||||||+||||++||+
T Consensus 15 ~~~~~~~~~p~iiaHRG~~~~~~~~~v~~~~~t~~~~~~~~~~~pENTl~Af~~A~~~Gad--~IE~DV~lTkDg~lVV~ 92 (309)
T cd08613 15 LLAPPPGGKPKLLAHRGLAQTFDREGVENDTCTAERIDPPTHDYLENTIASMQAAFDAGAD--VVELDVHPTKDGEFAVF 92 (309)
T ss_pred hhccCCCCCceEEeccCCCcccccccccccccccccccCcCCCCCchHHHHHHHHHHcCCC--EEEEEEEEccCCeEEEE
Confidence 3344456689999999987754 99999999999999999 99999999999999999
Q ss_pred cCCcCcccccccccccccccccccCCCCCCCcccccCCHHHHhcCcccCCccCC-CC--CCCCC-CcccCCHHHHHHHhC
Q 010671 141 PDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSR-TD--KFDGN-GFQILTVQDMARQIK 216 (504)
Q Consensus 141 HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r-~~--~~~g~-~~~IpTLeEvL~~~k 216 (504)
||.+|+|+|++. | .|.|+|++||+++++++|+... .. .|.+. ..+||||+|+|++++
T Consensus 93 HD~tL~R~T~g~-------------g------~V~dlTlaEL~~Ld~g~~~~~~~g~~~p~~~~~~~~IPTL~EvL~~~~ 153 (309)
T cd08613 93 HDWTLDCRTDGS-------------G------VTRDHTMAELKTLDIGYGYTADGGKTFPFRGKGVGMMPTLDEVFAAFP 153 (309)
T ss_pred ecCccccccCCC-------------C------chhhCCHHHHhhCCcCcccccccccccccccCCCCCCcCHHHHHHhcC
Confidence 999999999853 2 6999999999999998765321 11 12221 247999999999998
Q ss_pred CCceEEeeccchhhhccchHHHHHHHHHHHhcCCc--eEecCC--HHHHHHHHHhcCCCCCcEEEEeccCCccCCCcccc
Q 010671 217 PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN--YISSPE--VNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQT 292 (504)
Q Consensus 217 ~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~~--~isSfd--~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~ 292 (504)
+.+++||||.+.. ...+.+.+++++++.. .+.||+ ...|++++++. | ..++. ....
T Consensus 154 ~~~l~IEiK~~~~------~~~~~v~~~i~~~~~~r~~v~sf~s~~~~l~~~r~l~-P-~~~~~----s~~~-------- 213 (309)
T cd08613 154 DRRFLINFKSDDA------AEGELLAEKLATLPRKRLQVLTVYGGDKPIAALRELT-P-DLRTL----SKAS-------- 213 (309)
T ss_pred CCcEEEEeCCCCc------cHHHHHHHHHHhcCccceEEEEEECCHHHHHHHHHHC-C-CCcee----cccc--------
Confidence 8889999997531 2356788888888753 455666 78899999986 3 34433 1110
Q ss_pred HHHHHhh-HHHHHhhhcccccCC----ccccccCccccCCC-CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHH
Q 010671 293 YGSLLKN-LTFIKTFASGILVPK----DYIWPVDESLYLLP-HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY 366 (504)
Q Consensus 293 y~~l~~~-l~~i~~~a~gi~~~~----~~i~~~~~~~~l~~-~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~ 366 (504)
+... +..+...-.+..|.. ...+|.+-...+.. +..+++++|++|.+|++|.=..- ..+.-..|..++|
T Consensus 214 ---~~~~~~~~~~~~~~g~~p~~~~~~~~~vP~~~~~~~~~w~~~f~~~~~~~g~~V~~~~~~~~--~~~~~~~d~~~~~ 288 (309)
T cd08613 214 ---MKDCLIEYLALGWTGYVPDSCRNTTLLIPLNYAPWLWGWPNRFLARMEAAGTRVILVGPYTG--GEFSEGFDTPEDL 288 (309)
T ss_pred ---hHHHHHHHHhhcccccCCccccCCeEecCccccceEEeCCHHHHHHHHHcCCeEEEEecccC--CcccCCCCCHHHH
Confidence 0000 111111112222222 11122221112223 57899999999999999932100 0011123556899
Q ss_pred HHHhhcCCCcccccccCCCCCh
Q 010671 367 LSFIDNGDFSVDGVLSDFPLTP 388 (504)
Q Consensus 367 ~~~i~~G~~gVDGIiTD~P~~~ 388 (504)
.++.+.| +|||+||+|+.+
T Consensus 289 ~~l~~~~---~~gi~T~r~~~l 307 (309)
T cd08613 289 KRLPEGF---TGYIWTNKIEAL 307 (309)
T ss_pred HHHHhhC---CCeEEeCCHhhc
Confidence 9999876 999999999864
No 36
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=100.00 E-value=9.9e-37 Score=302.83 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=188.0
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010671 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
.|+||||||+|+.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|||+..+
T Consensus 5 ~~~iiaHRG~s~~~PENTl~Af~~A~~~gad--~iE~Dv~lTkDg~lVv~HD~~~drt~~~~~----------------- 65 (257)
T COG0584 5 MPLIIAHRGASGYAPENTLAAFELAAEQGAD--YIELDVQLTKDGVLVVIHDETLDRTTNGLG----------------- 65 (257)
T ss_pred ceEEEeccCcCCCCCcchHHHHHHHHHcCCC--EEEeeccCccCCcEEEecccchhhhccCcc-----------------
Confidence 5899999999999999999999999999999 999999999999999999999999998431
Q ss_pred CcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC-CCceEEeeccchhhhccchHHHHHHHHHHHhcC
Q 010671 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k-~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g 249 (504)
.+.++|++|+++++.+.+ ....+ + +.+|+|+|++..+. +.++++|||.+........ +...++..+.+..
T Consensus 66 --~~~~~~~~~~~~~~~~~~---~~~~~-~--~~ip~l~~~l~~~~~~~~l~ieiK~~~~~~~~~~-~~~~~~~~~~~~~ 136 (257)
T COG0584 66 --TVRDLTLAELKRLDAGSF---RIPTF-G--EEIPTLEELLEATGRKIGLYIEIKSPGFHPQEGK-ILAALLALLKRYG 136 (257)
T ss_pred --ccccCChhhhcCcccCcc---cCCCC-C--CccCCHHHHHHHhcccCCeEEEecCCCcccchhh-hHHHHHHHHHHhc
Confidence 466999999999985554 23444 3 69999999999884 6889999998776544321 4556666665543
Q ss_pred ------CceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHH--hhHHHHHhhhcccccCCccccccC
Q 010671 250 ------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLL--KNLTFIKTFASGILVPKDYIWPVD 321 (504)
Q Consensus 250 ------~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~--~~l~~i~~~a~gi~~~~~~i~~~~ 321 (504)
..+++||+...++.+++.. | ..++++.+ .... . |..+. ..+..+..++.++++.+..+.+.
T Consensus 137 ~~~~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~~------~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~- 205 (257)
T COG0584 137 GTAADDRVILSSFDHAALKRIKRLA-P-DLPLGLLL-DATD------Q-YDWMELPRALKEVALYADGVGPDWAMLAEL- 205 (257)
T ss_pred ccCCCCceEEEecCHHHHHHHHHhC-c-CCceEEEE-cccc------h-hhhhhccchhhHHHhhhcccCcccceeccc-
Confidence 3489999999999999987 3 57888633 2210 0 22221 24666777888888766544321
Q ss_pred ccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010671 322 ESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 322 ~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
.+.++..+|..|+.|++|||+++ +.+..+.+.| ||||+||+|+.+...+.
T Consensus 206 -------~~~~v~~~~~~gl~v~~~tv~~~------------~~~~~~~~~g---vd~i~td~p~~~~~~~~ 255 (257)
T COG0584 206 -------LTELVDDAHAAGLKVHVWTVNEE------------DDIRLLLEAG---VDGLITDFPDLAVAFLN 255 (257)
T ss_pred -------ccHHHHHHHhCCCeEEEEecCcH------------HHHHHHHHcC---CCEEEcCCHHHHHHhhc
Confidence 36799999999999999999865 2267777665 99999999998877653
No 37
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=7.9e-37 Score=300.64 Aligned_cols=225 Identities=17% Similarity=0.086 Sum_probs=164.3
Q ss_pred cEEEEeCCCCCC---CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCC
Q 010671 92 PFVVARGGFSGI---FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (504)
Q Consensus 92 p~viaHRG~~~~---~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~ 168 (504)
+.+|||||+++. +||||++||+.|++.|+ +||+|||+||||++||+||.+|+|+|++. |
T Consensus 4 ~~~iaHRG~~~~~~~~pENTl~af~~A~~~G~---~iE~DV~lT~Dg~lVv~HD~~l~r~t~~~-------------~-- 65 (237)
T cd08585 4 DRPIAHRGLHDRDAGIPENSLSAFRAAAEAGY---GIELDVQLTADGEVVVFHDDNLKRLTGVE-------------G-- 65 (237)
T ss_pred CCceECCCCCCCCCCCCccHHHHHHHHHHcCC---cEEEEeeECCCCCEEEeccchHhhhcCCC-------------C--
Confidence 458999999875 79999999999999995 69999999999999999999999999853 2
Q ss_pred CCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHHHHHHHHh
Q 010671 169 TPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRS 247 (504)
Q Consensus 169 ~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~ 247 (504)
.|.++||+||++++++. . +++||||+|+|+.+++ ..++||||.+... ...+++.+++++++
T Consensus 66 ----~v~~~t~~eL~~l~~~~---------~--~~~iPtL~evl~~~~~~~~l~iEiK~~~~~---~~~l~~~v~~~l~~ 127 (237)
T cd08585 66 ----RVEELTAAELRALRLLG---------T--DEHIPTLDEVLELVAGRVPLLIELKSCGGG---DGGLERRVLAALKD 127 (237)
T ss_pred ----ccccCCHHHHhcCCCCC---------C--CCCCCCHHHHHHHhccCceEEEEEccCCcc---chHHHHHHHHHHHh
Confidence 68999999999998763 2 3799999999999864 5799999975431 23678889999988
Q ss_pred cCC-ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHH-HHhhHHH-HHhhhcccccCCccccccCccc
Q 010671 248 VVV-NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS-LLKNLTF-IKTFASGILVPKDYIWPVDESL 324 (504)
Q Consensus 248 ~g~-~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~-l~~~l~~-i~~~a~gi~~~~~~i~~~~~~~ 324 (504)
++. .+|+||++..|+++++.. | ..++.+.. ....... ....+.. +.+.+.. ...-++.+.+.+.
T Consensus 128 ~~~~v~i~SF~~~~l~~l~~~~-p-~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 194 (237)
T cd08585 128 YKGPAAIMSFDPRVVRWFRKLA-P-GIPRGQLS-EGSNDEA-DPAFWNEALLSALFSNLLTRPDFIAYHLD--------- 194 (237)
T ss_pred cCCCEEEEECCHHHHHHHHHHC-C-CCCEEEEe-cCCcccc-cccchhHHHHHhhhhhhccCCCEEEeChh---------
Confidence 754 488999999999999986 4 67887632 2110000 0000000 0000000 0001111222111
Q ss_pred cCCCCHHHHHHHHHc-CCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCccccccc
Q 010671 325 YLLPHTTIVLDAHKE-RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (504)
Q Consensus 325 ~l~~~~~lV~~ahk~-Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiT 382 (504)
..+..+|+.+|++ |++|++||||++ +++.+++++| +++||-
T Consensus 195 --~~~~~~v~~~~~~~G~~v~vWTVnd~------------~~~~~l~~~G---~~~i~~ 236 (237)
T cd08585 195 --DLPNPFVTLARALLGMPVIVWTVRTE------------EDIARLKQYA---DNIIFE 236 (237)
T ss_pred --hCcCHHHHHHHHhcCCcEEEEeCCCH------------HHHHHHHHhC---CeeEeC
Confidence 1146799999999 999999999854 7899999876 999873
No 38
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=100.00 E-value=2.2e-36 Score=297.34 Aligned_cols=225 Identities=12% Similarity=0.190 Sum_probs=161.5
Q ss_pred EEEeCCC--CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010671 94 VVARGGF--SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 94 viaHRG~--~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
+|||||+ ++.+||||+.||+.|++.|+| +||+|||+||||++||+||.+++|+... |....
T Consensus 1 ~~aHRG~G~~~~~pENTl~Af~~A~~~G~d--~iE~DV~lTkDg~lVv~HD~~~~r~~~~--------------g~~~~- 63 (237)
T cd08583 1 LIAHAMGGIDGKTYTNSLDAFEHNYKKGYR--VFEVDLSLTSDGVLVARHSWDESLLKQL--------------GLPTS- 63 (237)
T ss_pred CeeecCCCCCCCCCccHHHHHHHHHHhCCC--EEEEEeeEccCCCEEEEECCcCchhhhc--------------CCccc-
Confidence 4899995 899999999999999999999 9999999999999999999999875321 00000
Q ss_pred cccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC---CceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010671 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~---~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
..+.++|++||++++.. . +++||||+|+|+++++ ..++||||.+.. ..-..++..+++.++++
T Consensus 64 ~~i~~~t~~el~~~~~~----------~--~~~iptL~evl~~~~~~~~~~l~iEiK~~~~--~~~~~~~~~l~~~~~~~ 129 (237)
T cd08583 64 KNTKPLSYEEFKSKKIY----------G--KYTPMDFKDVIDLLKKYPDVYIVTDTKQDDD--NDIKKLYEYIVKEAKEV 129 (237)
T ss_pred ccccCCCHHHHhhcccc----------C--CCCCCCHHHHHHHHHhCCCeEEEEEecCCCc--ccHHHHHHHHHHHHHhh
Confidence 25789999999987542 2 3689999999999863 458999997432 11124566788888875
Q ss_pred C--C---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCc
Q 010671 249 V--V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDE 322 (504)
Q Consensus 249 g--~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~ 322 (504)
+ + .+++||++..|+.+++.. | ....++.+..... ..... .+..+... +.++.+++..
T Consensus 130 ~~~~~~~v~~~SF~~~~L~~~~~~~-p-~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~------ 192 (237)
T cd08583 130 DPDLLDRVIPQIYNEEMYEAIMSIY-P-FKSVIYTLYRQDS------IRLDE---IIAFCYENGIKAVTISKNY------ 192 (237)
T ss_pred cccccceeEEEecCHHHHHHHHHhC-C-CcceeeEeccccc------cchHH---HHHHHHHcCCcEEEechhh------
Confidence 3 3 388999999999999875 3 3344432211110 00000 01111211 2333433221
Q ss_pred cccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCC
Q 010671 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (504)
Q Consensus 323 ~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~ 386 (504)
..+.+++.+|++|++|++||+|+. +++++++++| ||||+||+|.
T Consensus 193 -----~~~~~v~~~~~~Gl~v~vwTVn~~------------~~~~~l~~~G---VdgiiTD~~~ 236 (237)
T cd08583 193 -----VNDKLIEKLNKAGIYVYVYTINDL------------KDAQEYKKLG---VYGIYTDFLT 236 (237)
T ss_pred -----cCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEeCCCC
Confidence 247899999999999999999854 7899999876 9999999985
No 39
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=100.00 E-value=7.9e-36 Score=292.26 Aligned_cols=239 Identities=24% Similarity=0.334 Sum_probs=151.0
Q ss_pred eCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCccccc
Q 010671 97 RGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSID 176 (504)
Q Consensus 97 HRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~v~d 176 (504)
|||+++.+||||++||+.|++.|++ +||||||+||||++||+||.+|+|+|+... .+.|
T Consensus 1 HRG~~~~~pENTl~af~~A~~~G~~--~iE~Dv~lTkDg~~Vv~HD~~l~r~~~~~~-------------------~i~~ 59 (256)
T PF03009_consen 1 HRGASGNAPENTLAAFRAAIELGAD--GIELDVQLTKDGVPVVFHDDTLDRTTGGDG-------------------PISD 59 (256)
T ss_dssp TTTTTTTSSTTSHHHHHHHHHTTSS--EEEEEEEE-TTS-EEE-SSSBSTTTSSTES-------------------BGGG
T ss_pred CCCCCCCChhhHHHHHHHHHHhCCC--eEcccccccCCceeEeccCCeeeeecCCCc-------------------eecc
Confidence 9999999999999999999999999 999999999999999999999999999542 6899
Q ss_pred CCHHHHhcCc-ccCC--ccCCCCCCCCCCcccCCHHHHHHHhCCCceE--Eeeccchhhhccch-HHHHHHHHHHHhc--
Q 010671 177 YTLNDLSNII-LNQG--VYSRTDKFDGNGFQILTVQDMARQIKPPGLW--LNIQHDAFYAQHNL-SMRSFVLSVSRSV-- 248 (504)
Q Consensus 177 ~Tl~EL~~l~-~~~~--~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~--iEIK~~~~~~~~~~-~~~~~v~~~l~~~-- 248 (504)
+||+||++++ +..+ ...+...+++ ..+||||+|+|+++...++. +++|.......... .+...+...+...
T Consensus 60 ~t~~el~~l~~~~~~~~~~~~~~~~~~-~~~i~tl~e~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PF03009_consen 60 LTYAELKKLRTLGSKNSPPFRGQRIPG-KQKIPTLEEVLELCAKVKLNLEIKIKSKDEIKDPEFLKIVKDIVESVSDILK 138 (256)
T ss_dssp S-HHHHTTSBESSTTTTCGGTTTTSCT-CB--EBHHHHHHHHHTTTSEEEEEEEECTTSHHHHHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHhhCcccccCCcccccccceec-ccccCcHHHHHHhhhhccceeEEEEeecccccchhhcccccccccccccccc
Confidence 9999999998 4322 2233444444 46899999999996555444 44443221111101 2333333333333
Q ss_pred -------CCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHH--HHhhHHHHHhhhcccccCCccccc
Q 010671 249 -------VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS--LLKNLTFIKTFASGILVPKDYIWP 319 (504)
Q Consensus 249 -------g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~--l~~~l~~i~~~a~gi~~~~~~i~~ 319 (504)
...+++||++..++.+++.. | ..++++.+.. .. ..+.+ .......+. ...+.. .+..
T Consensus 139 ~~~~~~~~~i~~~sf~~~~l~~l~~~~-~-~~~~~~l~~~-~~------~~~~~~~~~~~~~~~~--~~~~~~---~~~~ 204 (256)
T PF03009_consen 139 NSKQALSRRIIISSFDPEALKQLKQRA-P-RYPVGFLFEQ-DD------EAPADISLFELYKFVK--CPGFLA---SVWN 204 (256)
T ss_dssp HHHHHHCTSEEEEESCHHHHHHHHHHC-T-TSEEEEEESS-CH------HHHHH-CCHHHHHHHT--TTEEEE---EHGG
T ss_pred ccccccccccccccCcHHHHHHHHhcC-C-CceEEEEecc-Cc------cccccchhhHHHHhhc--cccccc---cccc
Confidence 23488999999999999987 3 5677763321 11 00110 000111111 111111 0111
Q ss_pred cCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCC
Q 010671 320 VDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (504)
Q Consensus 320 ~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~ 387 (504)
... ....+.+|+.+|++|+.|++||+|++ +.+++.+++++| |||||||+|++
T Consensus 205 ~~~---~~~~~~~v~~~~~~g~~v~~wtvn~~----------~~~~~~~l~~~g---vdgIiTD~P~~ 256 (256)
T PF03009_consen 205 YAD---RLGNPRLVQEAHKAGLKVYVWTVNDP----------DVEDMKRLLDLG---VDGIITDFPDT 256 (256)
T ss_dssp GGH---HCEBHHHHHHHHHTT-EEEEBSB-SH----------SHHHHHHHHHHT----SEEEES-HHH
T ss_pred ccc---ccccHHHHHHHHHCCCEEEEEecCCc----------HHHHHHHHHhCC---CCEEEEcCCCC
Confidence 000 00135799999999999999999863 147888889876 99999999964
No 40
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=99.98 E-value=2.3e-31 Score=250.78 Aligned_cols=185 Identities=22% Similarity=0.197 Sum_probs=144.0
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||++||+.|++.|++ +||+|||+||||++||+||
T Consensus 1 i~aHRG~~~~~pent~~a~~~a~~~g~~--~iE~Dv~~tkDg~~vv~Hd------------------------------- 47 (189)
T cd08556 1 IIAHRGASGEAPENTLAAFRKALEAGAD--GVELDVQLTKDGVLVVIHD------------------------------- 47 (189)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEEcC-------------------------------
Confidence 5899999999999999999999999999 9999999999999999999
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC-CCceEEeeccchhhhccchHHHHHHHHHHHhcCC--
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV-- 250 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k-~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~-- 250 (504)
+|||+|+|++++ +..++||+|.+.. ...+.+.+++++++++.
T Consensus 48 -------------------------------i~tL~e~l~~~~~~~~i~leiK~~~~----~~~~~~~l~~~i~~~~~~~ 92 (189)
T cd08556 48 -------------------------------IPTLEEVLELVKGGVGLNIELKEPTR----YPGLEAKVAELLREYGLEE 92 (189)
T ss_pred -------------------------------CCCHHHHHHhcccCcEEEEEECCCCC----chhHHHHHHHHHHHcCCcC
Confidence 579999999998 4779999998643 23578889999999864
Q ss_pred -ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCCCC
Q 010671 251 -NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPH 329 (504)
Q Consensus 251 -~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~ 329 (504)
.+|+||++..++.+++.. | +.++.+.. .... .. +... .......+.++.+.+.. ..
T Consensus 93 ~v~i~s~~~~~l~~~~~~~-p-~~~~~~~~-~~~~-~~-----~~~~---~~~~~~~~~~v~~~~~~-----------~~ 149 (189)
T cd08556 93 RVVVSSFDHEALRALKELD-P-EVPTGLLV-DKPP-LD-----PLLA---ELARALGADAVNPHYKL-----------LT 149 (189)
T ss_pred CEEEEeCCHHHHHHHHHhC-C-CCcEEEEe-ecCc-cc-----chhh---hHHHhcCCeEEccChhh-----------CC
Confidence 489999999999999986 4 67777633 2111 10 0000 00111123444443221 24
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~ 384 (504)
+.+++.+|++|++|++||+++. +++..++++| ||||+||+
T Consensus 150 ~~~i~~~~~~g~~v~~wtvn~~------------~~~~~~~~~G---VdgI~TD~ 189 (189)
T cd08556 150 PELVRAAHAAGLKVYVWTVNDP------------EDARRLLALG---VDGIITDD 189 (189)
T ss_pred HHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHCC---CCEEecCC
Confidence 7899999999999999999753 7889999776 99999996
No 41
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.97 E-value=1.5e-29 Score=238.70 Aligned_cols=165 Identities=24% Similarity=0.245 Sum_probs=129.3
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
||||||+++.+||||+.||+.|++.|++ +||+|||+||||++||+||.+++|+|.
T Consensus 1 iiaHRG~~~~~peNT~~af~~a~~~G~~--~iE~DV~lt~Dg~lvv~HD~~~~r~~~----------------------- 55 (179)
T cd08555 1 VLSHRGYSQNGQENTLEAFYRALDAGAR--GLELDVRLTKDGELVVYHGPTLDRTTA----------------------- 55 (179)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeEcCCCeEEEECCCccccccC-----------------------
Confidence 5899999999999999999999999999 999999999999999999999988651
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--------CceEEeeccchhhhccchHHHHHHHHHH
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--------PGLWLNIQHDAFYAQHNLSMRSFVLSVS 245 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--------~~l~iEIK~~~~~~~~~~~~~~~v~~~l 245 (504)
++++|||+|+|+++++ ..++||+|.+.. ....+.+.+++.+
T Consensus 56 ----------------------------~~~~ptl~evl~~~~~~~~~~~~~~~l~iEiK~~~~---~~~~~~~~~~~~~ 104 (179)
T cd08555 56 ----------------------------GILPPTLEEVLELIADYLKNPDYTIILSLEIKQDSP---EYDEFLAKVLKEL 104 (179)
T ss_pred ----------------------------CCCCCCHHHHHHHHHhhhhcCCCceEEEEEeCCCCC---cchHHHHHHHHHH
Confidence 2589999999999864 468999997543 1235677888888
Q ss_pred HhcC---C---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccc
Q 010671 246 RSVV---V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWP 319 (504)
Q Consensus 246 ~~~g---~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~ 319 (504)
++++ . ++++|| ...++ .. + . .. .
T Consensus 105 ~~~~~~~~~~~v~i~sf---------~~~~~---~~-~-----------------------~-----~~---~------- 133 (179)
T cd08555 105 RVYFDYDLRGKVVLSSF---------NALGV---DY-Y-----------------------N-----FS---S------- 133 (179)
T ss_pred HHcCCcccCCCEEEEee---------cccCC---Ch-h-----------------------c-----cc---c-------
Confidence 8876 3 378888 00000 00 0 0 00 0
Q ss_pred cCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC
Q 010671 320 VDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (504)
Q Consensus 320 ~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~ 384 (504)
+....+++|+.+|++|++|++||+|++ .+++.+++++| ||||+||+
T Consensus 134 -----~~~~~~~~v~~~~~~g~~v~~wtvn~~-----------~~~~~~l~~~G---vd~i~TD~ 179 (179)
T cd08555 134 -----KLIKDTELIASANKLGLLSRIWTVNDN-----------NEIINKFLNLG---VDGLITDF 179 (179)
T ss_pred -----hhhcCHHHHHHHHHCCCEEEEEeeCCh-----------HHHHHHHHHcC---CCEEeCCC
Confidence 011247899999999999999999851 37889999776 99999996
No 42
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=99.91 E-value=6.4e-25 Score=220.81 Aligned_cols=93 Identities=34% Similarity=0.477 Sum_probs=88.1
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCC--CEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchh-hhccCC
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGV--DFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIP-EIMAGS 484 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~--~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~-~~~~~~ 484 (504)
|+||||||++|.+||||++||+.|++.|| ++||||||+||||++||+||.+|+|+||+++ .|++|..++. +++...
T Consensus 1 plVIAHRGasg~~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgvlVv~HD~~L~rtT~v~~-~F~~r~~t~~idG~~~~ 79 (299)
T cd08603 1 PLVIARGGFSGLFPDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTIAR-VYPKRKKTYSVNGVSTK 79 (299)
T ss_pred CeEEecCCCCCCCCcchHHHHHHHHHcCCCCCEEEEEeeECcCCcEEEeCCccccccCCCcc-ccccccccccccccccC
Confidence 68999999999999999999999999999 4899999999999999999999999999877 5999999887 999999
Q ss_pred CccccccCHHHHhchhh
Q 010671 485 GIFSFSLIWDEIQTLIR 501 (504)
Q Consensus 485 ~~~~~~~t~~ei~tL~~ 501 (504)
|||+.||||+||++|+.
T Consensus 80 g~~~~d~TlaELk~L~~ 96 (299)
T cd08603 80 GWFSVDFTLAELQQVTL 96 (299)
T ss_pred CceeccCCHHHHhhCCC
Confidence 99999999999999985
No 43
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=99.91 E-value=2e-24 Score=222.49 Aligned_cols=275 Identities=21% Similarity=0.278 Sum_probs=197.3
Q ss_pred HhhhhhccCCCCCCccccCCCCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCccc
Q 010671 69 VIAQVSAQGSNATSRWQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNA 148 (504)
Q Consensus 69 ~~~~~~~~~s~~~~~~~~~~~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rt 148 (504)
+.+..+.+.+.....|...+ ...|++|||++|.+||||++||++|++.|+| .||||||+||||++|++||.+..|+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~--~~~i~~~rga~g~~penT~~A~~~a~~~Gad--~ie~dV~~TsDg~~v~l~d~~~~r~ 123 (341)
T KOG2258|consen 48 LFSDPPPTASAHKNLFLHIG--GWLIIAHRGASGDAPENTLAAYKKAIADGAD--LIELDVQMTSDGVPVILHDSTTVRV 123 (341)
T ss_pred hhcCCccchhhhHHHhcCCC--CceeEeccCCCCCCCcccHHHHHHHHHcCCc--EEEeccccCCCCceEEeecCcceee
Confidence 33333433333444454433 6899999999999999999999999999999 9999999999999999999999998
Q ss_pred ccccccccccccccccCCCCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCC--ceEEeecc
Q 010671 149 SNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPP--GLWLNIQH 226 (504)
Q Consensus 149 T~~~~~~~~~~~~~~vdG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~--~l~iEIK~ 226 (504)
+++.. .+.++||.|++++..........+.+. ..++|+|+|....+-+. .++-|.|
T Consensus 124 ~~v~~-------------------~~~~lt~~e~~~l~~~~~~~~~~~~~~--~~~~~~l~e~v~~~~~~n~~~l~d~~- 181 (341)
T KOG2258|consen 124 TGVPE-------------------IVFDLTWMELRKLGPKIENPFAGPIIT--LEKLLTLAEAVASVVGNNVAMLNDVK- 181 (341)
T ss_pred eccee-------------------eeccCCHHHHhccCccccCcccccccc--hhhhccHHHHHHHHHcCChhhhhhhh-
Confidence 88642 478999999999987654322111221 36899999998877432 2233333
Q ss_pred chhhhccchHHHHHHHHHHHhcCC-------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhh
Q 010671 227 DAFYAQHNLSMRSFVLSVSRSVVV-------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKN 299 (504)
Q Consensus 227 ~~~~~~~~~~~~~~v~~~l~~~g~-------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~ 299 (504)
+.+.+.+++.+++.+. .+++||++..+.++++.. + . + +.+ +.+.. + ....
T Consensus 182 --------~~~~~~vl~~l~~~~~~~~~~~kv~v~s~~~~~l~~~~~~~-~-~----~-~i~-~~~~~----~---~ls~ 238 (341)
T KOG2258|consen 182 --------LLVVDKVLEALKNATSDFSLYDKVLVQSFNPIVLYRLKKLD-P-F----I-LIG-DTWRF----T---FLSG 238 (341)
T ss_pred --------hhhHHHHHHHHHHHhcCCCccceEEEEecCcHHHHHhccCC-c-e----E-Eec-ceecc----h---hhcc
Confidence 2566777777776543 389999999999998864 2 1 1 111 11111 0 1113
Q ss_pred HHHHHhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccc
Q 010671 300 LTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG 379 (504)
Q Consensus 300 l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDG 379 (504)
.+.++.++.++.+++..+.+......+...++++...++.++.|+++.++++....++|..++.-++..++.+ .|++|
T Consensus 239 ~~dik~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~e~~~~~d~~~~~~~~~~~~~~~--~~~~~ 316 (341)
T KOG2258|consen 239 IEDIKKRAFAVVSSKLAIFPVSDSLVLAITKNVVAPLQKLNLVVYVEVFNNEVVLAVDFSAAPTIELAGWITN--VGIDG 316 (341)
T ss_pred chhhhcccceeeechHHHHHHHHHHhhhhhcceeeehhcCCcEEEEEEeeccceeeccccccCceEeeeeecc--ccccC
Confidence 4567777777877776666653332233334789999999999999999999667778877887777777763 46999
Q ss_pred cccCCCCChHHHHHH
Q 010671 380 VLSDFPLTPSAAVDC 394 (504)
Q Consensus 380 IiTD~P~~~~~~l~~ 394 (504)
.+||++..+..+.+.
T Consensus 317 ~~~~~~~~~~~l~~~ 331 (341)
T KOG2258|consen 317 YITDFHLTAPRLTDN 331 (341)
T ss_pred ceeeccchhhHhhcc
Confidence 999999988877753
No 44
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=99.90 E-value=5.4e-24 Score=216.40 Aligned_cols=94 Identities=69% Similarity=1.101 Sum_probs=86.8
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccCCCcc
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~~~~~ 487 (504)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||++|+|+||+.+..|+.+..+++++.+..||+
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~~~~ 80 (300)
T cd08604 1 PLIISHNGASGDYPGCTDLAYQKAVKDGADVIDCSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTVPEIGSTSGIF 80 (300)
T ss_pred CeEEecCCcCCCCCcchHHHHHHHHHcCCCEEEEeeeEcCCCCEEEeccccccCcccCCcccccccccccccccccCcee
Confidence 68999999999999999999999999999999999999999999999999999999987767888887777776677888
Q ss_pred ccccCHHHHhchhh
Q 010671 488 SFSLIWDEIQTLIR 501 (504)
Q Consensus 488 ~~~~t~~ei~tL~~ 501 (504)
..+||++||++|+.
T Consensus 81 v~d~t~~eL~~l~~ 94 (300)
T cd08604 81 TFDLTWSEIQTLKP 94 (300)
T ss_pred eecCcHHHHhhCcc
Confidence 99999999999874
No 45
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=99.89 E-value=3e-22 Score=202.52 Aligned_cols=205 Identities=14% Similarity=0.090 Sum_probs=144.8
Q ss_pred HHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcccccCCHHHHhcCcc
Q 010671 108 SSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIIL 187 (504)
Q Consensus 108 T~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~v~d~Tl~EL~~l~~ 187 (504)
+..+|..|.++|+| +||+|||+||||+|||+||..+.++ ++. ..+.|+||+||++++.
T Consensus 17 ~~~sfvtAsslgad--~VE~DVqLTkDgvpVV~HD~~i~~t-~~~-------------------~~V~dlTleqL~~l~~ 74 (300)
T cd08578 17 DGNSFVTASSLSGE--YLRVKVCVLKDGTPVVAPEWFVPVG-GIK-------------------LLVSDLTAEQLESILD 74 (300)
T ss_pred CchhHHHHHHcCCC--EEEEEEEECcCCEEEEECCCceEec-CCc-------------------EEeecCcHHHHhccCC
Confidence 46799999999999 9999999999999999999999775 421 2699999999999987
Q ss_pred cCCccCCC--------CCCCCCCcccCCHHHHHHHhC-CCceEEeeccchhhhcc--------c---hHHHHHHHHHHHh
Q 010671 188 NQGVYSRT--------DKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQH--------N---LSMRSFVLSVSRS 247 (504)
Q Consensus 188 ~~~~~~r~--------~~~~g~~~~IpTLeEvL~~~k-~~~l~iEIK~~~~~~~~--------~---~~~~~~v~~~l~~ 247 (504)
..+..... ..+.+ .++|||+|+|+.+. ..+++||||+|...+.. . -.+++.+++++-+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~--~~~pTL~evL~~lp~~iglNIEIK~P~~~e~~~~~~~~~~~~d~N~fvD~IL~~Vf~ 152 (300)
T cd08578 75 YSLDDLNSEISDMVDLKRLLS--SRVVSLETLLELLPPSIQLDIQVLFPTAAEIASIPVKGSPLVDLNKFIDTVLLVVFD 152 (300)
T ss_pred cccccccccccccchhhhhcC--CcCCCHHHHHHhhccCCeEEEEECCCChHHhhhccccccchhHHHHHHHHHHHHHHH
Confidence 65432100 12333 68999999999985 47899999998775421 1 2456666766654
Q ss_pred cC-----------CceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCC------------------ccccHHHHHh
Q 010671 248 VV-----------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPT------------------TNQTYGSLLK 298 (504)
Q Consensus 248 ~g-----------~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~------------------~~~~y~~l~~ 298 (504)
+. ..+++||+++++..++.+. | +.|+.| +.+.. ..+. ....|.+...
T Consensus 153 har~~~~~~~~~R~IiFSSf~pdiC~~L~~KQ-p-~yPV~f-l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~ 228 (300)
T cd08578 153 HARYLRHTPGSTRSIVFSSCNPEVCTILNWKQ-P-NFPVFF-AMNGL-VRNNDTLSFDTPHHLDSLAVDPQKLNEADPRS 228 (300)
T ss_pred HhhhhcccCCCCCceEEeeCCHHHHHHHHhcC-C-CCCEEE-EecCC-ccccccccccccccccccccccccccccCchh
Confidence 31 2488999999999999887 3 688887 32221 1110 0112444433
Q ss_pred -hHHHHHhhhc-----ccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCC
Q 010671 299 -NLTFIKTFAS-----GILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFA 349 (504)
Q Consensus 299 -~l~~i~~~a~-----gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~ 349 (504)
.+.+...||. |+..+.+. |...+.+|+.++++||-+++|+-.
T Consensus 229 ~Si~~Av~fA~~~nL~Giv~~~~~---------L~~~P~lV~~ik~~GL~lv~~g~~ 276 (300)
T cd08578 229 RSIKEAVRFAKNNNLLGLILPYSL---------LNIVPQLVESIKSRGLLLIASGEP 276 (300)
T ss_pred hhHHHHHHHHHHcCCcEEEecHHH---------HhhChHHHHHHHHcCCEEEEECCC
Confidence 4666666654 33333322 234578999999999999999965
No 46
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=99.89 E-value=1.1e-23 Score=214.34 Aligned_cols=93 Identities=60% Similarity=0.894 Sum_probs=84.1
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchh-hhccCCCc
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIP-EIMAGSGI 486 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~-~~~~~~~~ 486 (504)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||++|+|+||+.+ .++.+..++. +..+..||
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVv~HD~~l~rtt~~~~-~~~~~~~~~~~~~~~~~g~ 79 (302)
T cd08571 1 PLVIARGGASGDYPDSTDLAYQKAISDGADVLDCDVQLTKDGVPICLPSINLDNSTTIAS-VFPKRKKTYVVEGQSTSGI 79 (302)
T ss_pred CeEEeCCCcCCCCCcchHHHHHHHHHcCCCEEEeeeeEcCCCcEEEeCCchhcCCccccc-ccccccceecccCcccCCe
Confidence 689999999999999999999999999999999999999999999999999999999764 4666666554 66677899
Q ss_pred cccccCHHHHhchhh
Q 010671 487 FSFSLIWDEIQTLIR 501 (504)
Q Consensus 487 ~~~~~t~~ei~tL~~ 501 (504)
+..+||++||++|+.
T Consensus 80 ~v~d~T~aeL~~l~~ 94 (302)
T cd08571 80 FSFDLTWAEIQTLKP 94 (302)
T ss_pred eeeeCCHHHHhhCcc
Confidence 999999999999975
No 47
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.88 E-value=5.8e-23 Score=212.41 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=85.2
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCc-CcccccCCCC-CcccCcccchh-hhc
Q 010671 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI-NLINSTNAAQ-SKFNSITTTIP-EIM 481 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~-~l~r~t~~~~-~~~~~~~~~~~-~~~ 481 (504)
...++||||||+++.+||||++||+.|+++|||+||+||++||||+|||+||. +|+|+||+.. +.|+.+..+.. ++.
T Consensus 14 ~~~~~iIAHRGasg~~PEnTl~Af~~Ai~~Gad~IE~DV~lTkDg~lVV~HD~~~L~rtTnv~~~pe~a~r~~~~~~~g~ 93 (356)
T cd08560 14 RKTDFSIGHRGAPLQFPEHTRESYEAAARMGAGILECDVTFTKDRELVCRHSQCDLHTTTNILAIPELAAKCTQPFTPAN 93 (356)
T ss_pred CCCceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccccCccCCccccchhhhccccccccc
Confidence 35789999999999999999999999999999999999999999999999997 8999999876 56776665433 333
Q ss_pred c----CCCccccccCHHHHhchhhh
Q 010671 482 A----GSGIFSFSLIWDEIQTLIRK 502 (504)
Q Consensus 482 ~----~~~~~~~~~t~~ei~tL~~~ 502 (504)
. .++|++.+||++||++|+..
T Consensus 94 ~~~~~~~~~~v~d~TlaELk~L~~~ 118 (356)
T cd08560 94 ATKPASAECCTSDITLAEFKSLCGK 118 (356)
T ss_pred cccccccCcchhhCcHHHHhcCCCc
Confidence 2 45799999999999999853
No 48
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=99.88 E-value=5.9e-23 Score=204.00 Aligned_cols=97 Identities=26% Similarity=0.242 Sum_probs=81.9
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCc-----ccCcccchhhhc
Q 010671 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSK-----FNSITTTIPEIM 481 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~-----~~~~~~~~~~~~ 481 (504)
+|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||+.+.. ..-...|..|++
T Consensus 1 ~~~iiAHRG~~~~aPENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVV~HD~~l~Rtt~~~g~~~~~~~~~v~~~T~~eL~ 80 (252)
T cd08574 1 KPALIGHRGAPMLAPENTLMSFEKALEHGVYGLETDVTISYDGVPFLMHDRTLRRTTNVADVFPERAHERASMFTWTDLQ 80 (252)
T ss_pred CCeEEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeEccCCcEEEeCCCcccccCCCCcccccccccchhcCCHHHHh
Confidence 478999999999999999999999999999999999999999999999999999999976521 122467777887
Q ss_pred cC--CCcccc----------------ccCHHHHhchhhhh
Q 010671 482 AG--SGIFSF----------------SLIWDEIQTLIRKL 503 (504)
Q Consensus 482 ~~--~~~~~~----------------~~t~~ei~tL~~~~ 503 (504)
.. +.||.. .++.+.||||++.|
T Consensus 81 ~ld~g~~f~~~~~~~~~~~~~~~~~~~~~~~~IPtL~evl 120 (252)
T cd08574 81 QLNAGQWFLKDDPFWTASSLSESDREEAGNQSIPSLAELL 120 (252)
T ss_pred hCCCCCcccCCCccchhcccccchhhhcCCCCCCCHHHHH
Confidence 64 578754 46778899998866
No 49
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=99.87 E-value=2e-22 Score=205.70 Aligned_cols=94 Identities=36% Similarity=0.463 Sum_probs=81.8
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCC-CcccCcccchh-hhccCCC
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQ-SKFNSITTTIP-EIMAGSG 485 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~-~~~~~~~~~~~-~~~~~~~ 485 (504)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|++.+ +.|+++..+.. ++.+..|
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DVqlTkDg~lVv~HD~~l~rtt~~~~~~~~~~r~~~~~i~~~~~~~ 80 (309)
T cd08602 1 PLVIAHRGASGYRPEHTLAAYQLAIEQGADFIEPDLVSTKDGVLICRHEPELSGTTDVADHPEFADRKTTKTVDGVNVTG 80 (309)
T ss_pred CeEEecCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEeCCCccccccCccccccccccccccccCCcccCC
Confidence 689999999999999999999999999999999999999999999999999999999765 34666655422 3444568
Q ss_pred ccccccCHHHHhchhh
Q 010671 486 IFSFSLIWDEIQTLIR 501 (504)
Q Consensus 486 ~~~~~~t~~ei~tL~~ 501 (504)
++..+||++||++|+.
T Consensus 81 ~~v~d~t~~eL~~l~~ 96 (309)
T cd08602 81 WFTEDFTLAELKTLRA 96 (309)
T ss_pred eeeccCCHHHHhhCcc
Confidence 8899999999999875
No 50
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=99.86 E-value=3.9e-22 Score=203.53 Aligned_cols=97 Identities=25% Similarity=0.242 Sum_probs=80.7
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCc--c---cCcccchhhhc
Q 010671 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSK--F---NSITTTIPEIM 481 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~--~---~~~~~~~~~~~ 481 (504)
.|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||++|+|+||+.+.. . .-...+..|++
T Consensus 26 ~~~IIAHRGas~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~g~~~~~~~~~V~dlTlaEL~ 105 (315)
T cd08609 26 KPALVGHRGAPMLAPENTLMSLRKSLECGVVVFETDVMVSKDGVPFLMHDEGLLRTTNVKDVFPGRDAAGSNNFTWTELK 105 (315)
T ss_pred CCeEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEeCCCcccccCCCCCCccccccccHhhCCHHHHh
Confidence 478999999999999999999999999999999999999999999999999999999975420 0 12466777777
Q ss_pred cC--CCccccc----------------cCHHHHhchhhhh
Q 010671 482 AG--SGIFSFS----------------LIWDEIQTLIRKL 503 (504)
Q Consensus 482 ~~--~~~~~~~----------------~t~~ei~tL~~~~ 503 (504)
.. ++||... +..+.||||++.|
T Consensus 106 ~ld~g~wf~~~~~~~~~~~~~~~~~~~~~ge~IPTL~EvL 145 (315)
T cd08609 106 TLNAGSWFLERRPFWTLSSLSEEDRREADNQTVPSLSELL 145 (315)
T ss_pred hCCCCcccCcccccccccccccccccccCCCCCCCHHHHH
Confidence 64 4677653 3567889998866
No 51
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=99.86 E-value=4.2e-22 Score=197.51 Aligned_cols=95 Identities=19% Similarity=0.161 Sum_probs=84.8
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc--C
Q 010671 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA--G 483 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~--~ 483 (504)
..|.+|||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|++.+.+ ...++.|++. .
T Consensus 6 ~~~~iiaHRG~~~~~pENT~~Af~~A~~~G~d~vE~DV~lT~Dg~lVV~HD~~l~R~t~~~~~v---~~~t~~el~~l~~ 82 (249)
T PRK09454 6 PYPRIVAHRGGGKLAPENTLAAIDVGARYGHRMIEFDAKLSADGEIFLLHDDTLERTSNGWGVA---GELTWQDLAQLDA 82 (249)
T ss_pred CCCeEEECCCCCCCCChHHHHHHHHHHHcCCCEEEEEeeECCCCCEEEECCCcccccCCCCCch---hhCCHHHHHhcCC
Confidence 3589999999999999999999999999999999999999999999999999999999976543 4677778876 4
Q ss_pred CCccccccCHHHHhchhhhh
Q 010671 484 SGIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 484 ~~~~~~~~t~~ei~tL~~~~ 503 (504)
+.||...+..+.||+|++.|
T Consensus 83 ~~~~~~~~~~~~iPtL~evl 102 (249)
T PRK09454 83 GSWFSAAFAGEPLPTLSQVA 102 (249)
T ss_pred CCccCCCCCCCcCCCHHHHH
Confidence 57888889888999999876
No 52
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=99.86 E-value=4.1e-22 Score=205.56 Aligned_cols=96 Identities=24% Similarity=0.254 Sum_probs=80.6
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccC------cccchhhh
Q 010671 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNS------ITTTIPEI 480 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~------~~~~~~~~ 480 (504)
+|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||++|+|+||+.+. ++. ...++.|+
T Consensus 1 ~p~IIAHRGas~~aPENTL~AF~~A~~~GaD~IElDV~lTkDGvlVV~HD~tL~RtTn~~g~-v~~~~~~~~~~~TlaEL 79 (351)
T cd08608 1 KPAIIGHRGAPMLAPENTLMSFQKALEQKVYGLQADVTISLDGVPFLMHDRTLRRTTNVDRV-FPERQYEDASMFNWTDL 79 (351)
T ss_pred CCeEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccccccCCCCc-cccccccccccCCHHHH
Confidence 47899999999999999999999999999999999999999999999999999999997653 322 34677777
Q ss_pred cc--CCCcccc----------------ccCHHHHhchhhhh
Q 010671 481 MA--GSGIFSF----------------SLIWDEIQTLIRKL 503 (504)
Q Consensus 481 ~~--~~~~~~~----------------~~t~~ei~tL~~~~ 503 (504)
+. .+.||.. .+..+.||||++.|
T Consensus 80 ~~LdaG~wf~~~~p~~~~~~~~~~~~~~~~ge~IPTL~EvL 120 (351)
T cd08608 80 ERLNAGQWFLKDDPFWTAQSLSPSDRKEAGNQSVCSLAELL 120 (351)
T ss_pred hhCCCCcccccCCccccccccccccccccCCCCCCCHHHHH
Confidence 76 3567753 35567788888766
No 53
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=99.86 E-value=5.1e-22 Score=203.45 Aligned_cols=86 Identities=28% Similarity=0.372 Sum_probs=72.0
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccCCCcc
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~~~~~ 487 (504)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||+.+ .|+.+..+ .++++
T Consensus 1 ~lviAHRG~s~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~-~~~~~~~~------~g~~~ 73 (318)
T cd08600 1 KIIIAHRGASGYLPEHTLEAKALAYAQGADYLEQDVVLTKDDKLVVIHDHYLDNVTNVAE-KFPDRKRK------DGRYY 73 (318)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEeeeeECcCCcEEEeCCchhhccCCccc-cccccccc------CCcee
Confidence 689999999999999999999999999999999999999999999999999999999764 34433321 13455
Q ss_pred ccccCHHHHhchh
Q 010671 488 SFSLIWDEIQTLI 500 (504)
Q Consensus 488 ~~~~t~~ei~tL~ 500 (504)
..+||++||++|+
T Consensus 74 v~dlT~aEL~~ld 86 (318)
T cd08600 74 VIDFTLDELKSLS 86 (318)
T ss_pred EeeCcHHHHhhCC
Confidence 6677777777765
No 54
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=99.85 E-value=6.4e-22 Score=201.88 Aligned_cols=100 Identities=23% Similarity=0.244 Sum_probs=83.0
Q ss_pred ccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCccc------Ccccc
Q 010671 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFN------SITTT 476 (504)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~------~~~~~ 476 (504)
.-..+|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||+.+. ++ -...|
T Consensus 18 ~~~~~~~IiAHRGa~~~aPENTl~AF~~A~~~Gad~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~~~-~~~~~~~~V~~~T 96 (316)
T cd08610 18 TLGPKPTIIGHRGAPMLAPENTMMSFEKAIEHGAHGLETDVTLSYDGVPFLMHDFTLKRTTNIGEV-QPESACENPAFFN 96 (316)
T ss_pred ccCCCCeEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCCEEEeCCCccccccCCCCc-cccccccchhhCC
Confidence 344568899999999999999999999999999999999999999999999999999999997542 22 22467
Q ss_pred hhhhcc--CCCccccc----------------cCHHHHhchhhhh
Q 010671 477 IPEIMA--GSGIFSFS----------------LIWDEIQTLIRKL 503 (504)
Q Consensus 477 ~~~~~~--~~~~~~~~----------------~t~~ei~tL~~~~ 503 (504)
+.|++. .++||... +..+.||||++.|
T Consensus 97 laEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~~e~IPTLeEvL 141 (316)
T cd08610 97 WDFLSTLNAGKWFVKPRPFYNMKPLSEADKERARNQSIPKLSNFL 141 (316)
T ss_pred HHHHhhCCCCCccCcccccccccccccccccccCCCCCCCHHHHH
Confidence 777876 45788643 3467899998866
No 55
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.85 E-value=4.7e-22 Score=194.84 Aligned_cols=91 Identities=21% Similarity=0.327 Sum_probs=80.8
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC----CC
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG----SG 485 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~----~~ 485 (504)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+.. ...+..+++.. ++
T Consensus 1 iiaHRG~~~~~PENTl~Af~~A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~v---~~~t~~el~~l~~~~~~ 77 (229)
T cd08581 1 LVAHRGYPARYPENTLVGFRAAVDAGARFVEFDVQLSADGVPVVFHDDTLLRLTGVEGLL---HELEDAELDSLRVAEPA 77 (229)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEECCCccccccCCCcee---ccCCHHHHhhcccccCc
Confidence 689999999999999999999999999999999999999999999999999999976532 35667777753 57
Q ss_pred ccccccCHHHHhchhhhh
Q 010671 486 IFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 486 ~~~~~~t~~ei~tL~~~~ 503 (504)
||...|..+.|+||++.|
T Consensus 78 ~~~~~~~~~~iptL~evl 95 (229)
T cd08581 78 RFGSRFAGEPLPSLAAVV 95 (229)
T ss_pred ccccccCCccCCCHHHHH
Confidence 888888889999999875
No 56
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=99.85 E-value=9.2e-22 Score=204.00 Aligned_cols=91 Identities=29% Similarity=0.365 Sum_probs=77.3
Q ss_pred cccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC
Q 010671 404 KSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (504)
Q Consensus 404 ~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~ 483 (504)
.+.+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|++.+ .|+.+..+ .
T Consensus 23 ~~~~pliiAHRGas~~~PENTl~Af~~A~~~GaD~IE~DV~lTkDg~lVv~HD~~l~rtT~~~~-~~~~~~~~------~ 95 (355)
T PRK11143 23 DSAEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDQLVVLHDHYLDRVTDVAE-RFPDRARK------D 95 (355)
T ss_pred cCCCcEEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEeeeEccCCcEEEeCCchhcccCCccc-cccccccc------C
Confidence 5678999999999999999999999999999999999999999999999999999999999654 34433321 2
Q ss_pred CCccccccCHHHHhchhh
Q 010671 484 SGIFSFSLIWDEIQTLIR 501 (504)
Q Consensus 484 ~~~~~~~~t~~ei~tL~~ 501 (504)
++|+..+|||+||++|+.
T Consensus 96 g~~~v~dlT~aEL~~ld~ 113 (355)
T PRK11143 96 GRYYAIDFTLDEIKSLKF 113 (355)
T ss_pred CceeEeeCcHHHHhhCCC
Confidence 456677888888887764
No 57
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=99.85 E-value=1.2e-21 Score=195.39 Aligned_cols=94 Identities=31% Similarity=0.308 Sum_probs=79.0
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CC
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SG 485 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~ 485 (504)
|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+||+.+.. ...|+.+++.. +.
T Consensus 1 p~viaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~l~R~t~~~g~v---~~~t~~el~~ld~g~ 77 (263)
T cd08580 1 PLIVAHRGGTADAPENTLLAISKALANGADAIWLTVQLSKDGVPVLYRPSDLKSLTNGSGAV---SAYTAAQLATLNAGY 77 (263)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEeEECCCCCEEEeCCCchhcccCCCCCh---hhCcHHHHhcCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999976532 46777788864 46
Q ss_pred ccccc----cC--HHHHhchhhhhC
Q 010671 486 IFSFS----LI--WDEIQTLIRKLN 504 (504)
Q Consensus 486 ~~~~~----~t--~~ei~tL~~~~~ 504 (504)
||..+ |. .+.|+||++.|+
T Consensus 78 ~~~~~~~~~~~~~~~~iPtL~evl~ 102 (263)
T cd08580 78 NFKPEGGYPYRGKPVGIPTLEQVLR 102 (263)
T ss_pred ccccccCcccCCCCCcCccHHHHHH
Confidence 66433 32 237889887663
No 58
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=99.84 E-value=2.2e-21 Score=197.47 Aligned_cols=97 Identities=20% Similarity=0.154 Sum_probs=82.5
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC-
Q 010671 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG- 483 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~- 483 (504)
...|.||||||+++.+||||++||+.|++.|||+||+|||+||||++||+||++++|+|++.+.. ...+..|++..
T Consensus 24 ~~~~~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVV~HD~~l~Rtt~~~g~V---~~~t~~eL~~l~ 100 (300)
T cd08612 24 PFPCRHISHRGGSGENLENTMEAFEHAVKVGTDMLELDVHLTKDGQVVVSHDENLLRSCGVDKLV---SDLNYADLPPYL 100 (300)
T ss_pred CCCCCEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeECcCCeEEEECCccccccCCCCccc---ccCCHHHHhhcc
Confidence 55689999999999999999999999999999999999999999999999999999999965532 35666666654
Q ss_pred ---------CCccccccCHHHHhchhhhhC
Q 010671 484 ---------SGIFSFSLIWDEIQTLIRKLN 504 (504)
Q Consensus 484 ---------~~~~~~~~t~~ei~tL~~~~~ 504 (504)
+.||...+..+.||||++.|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~g~~IPtL~EvL~ 130 (300)
T cd08612 101 EKLEVTFSPGDYCVPKGSDRRIPLLEEVFE 130 (300)
T ss_pred ccccccccCCccccccCCCCCCCCHHHHHH
Confidence 235567788889999998763
No 59
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=99.83 E-value=5.2e-21 Score=194.41 Aligned_cols=59 Identities=42% Similarity=0.478 Sum_probs=57.5
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCC
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAA 466 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~ 466 (504)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||+.
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~t~~~ 59 (296)
T cd08559 1 PLVIAHRGASGYAPEHTLAAYALAIEMGADYIEQDLVMTKDGVLVARHDPTLDRTTNVA 59 (296)
T ss_pred CeEEEeCCcCCCCccchHHHHHHHHHhCCCEEEEeeEEccCCCEEEeccchhhcCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999865
No 60
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.83 E-value=2.7e-19 Score=168.54 Aligned_cols=187 Identities=13% Similarity=0.106 Sum_probs=125.1
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~ 173 (504)
|||||| ||+.||+.|++. | +||+|||+| ||++||+||.+++
T Consensus 1 IiAHRG-------NTl~AF~~A~~~--d--gvE~DVr~t-Dg~lVV~HD~~l~--------------------------- 41 (192)
T cd08584 1 IIAHRG-------NTITALKRTFEN--F--GVETDIRDY-GGQLVISHDPFVK--------------------------- 41 (192)
T ss_pred CCccch-------HHHHHHHHHHHC--C--EEEEEEEee-CCeEEEECCCCCC---------------------------
Confidence 589999 999999999999 8 999999999 9999999998652
Q ss_pred cccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHHHHHHhcCCc--
Q 010671 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN-- 251 (504)
Q Consensus 174 v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~~-- 251 (504)
++|||+|+|+++++..+.||||.+ .+++.+++++++++..
T Consensus 42 ------------------------------~~PtLeEvL~~~~~~~l~inIK~~--------~l~~~l~~li~~~~~~~~ 83 (192)
T cd08584 42 ------------------------------NGELLEDWLKEYNHGTLILNIKAE--------GLELRLKKLLAEYGITNY 83 (192)
T ss_pred ------------------------------CCCCHHHHHHhcccccEEEEECch--------hHHHHHHHHHHhcCCcce
Confidence 359999999999877799999954 4678899999998863
Q ss_pred -eEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCCCCH
Q 010671 252 -YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHT 330 (504)
Q Consensus 252 -~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~ 330 (504)
+++||++.+++.++.-. .++..+. .+.+..|. .-.+...+.++-+....- .-.+.
T Consensus 84 vi~ssf~~~~l~~~~~~~----~~i~tr~-Se~E~~~~-----------~~~~~~~~~~VW~D~f~~--------~~~~~ 139 (192)
T cd08584 84 FFLDMSVPDIIKYLENGE----KRTATRV-SEYEPIPT-----------ALSLYEKADWVWIDSFTS--------LWLDN 139 (192)
T ss_pred EEEEcCCHHHHHHHhcCC----CeeEEee-cccccchH-----------HHHhhccccEEEEecccc--------cCCCH
Confidence 78999999999997743 1233222 22211110 101122244443322111 11257
Q ss_pred HHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHH--HhhcCCCcccccccCCCCCh
Q 010671 331 TIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS--FIDNGDFSVDGVLSDFPLTP 388 (504)
Q Consensus 331 ~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~--~i~~G~~gVDGIiTD~P~~~ 388 (504)
..++...++|.+|..= -.|. .+-|-.+++.. .++..+.--+.|+||+|..+
T Consensus 140 ~~~~~~~~~~~~~c~V--SpEL-----h~~~~~~~~~~~~~~~~~~~~~~~~CT~~p~~~ 192 (192)
T cd08584 140 DLILKLLKAGKKICLV--SPEL-----HGRDHLAEWEAKQYIEFLKENFDALCTKVPDLW 192 (192)
T ss_pred HHHHHHHHCCcEEEEE--CHHH-----cCCChHHHHHHHHhhhhccccCeeEeccCcccC
Confidence 7999999999998653 2331 01122233332 22321112579999999753
No 61
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=99.83 E-value=5.3e-21 Score=186.59 Aligned_cols=91 Identities=27% Similarity=0.307 Sum_probs=78.3
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc--CCCcc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA--GSGIF 487 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~--~~~~~ 487 (504)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+. -...+..|++. .+.|+
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~gad~iE~Dv~~TkDg~lvv~HD~~l~r~t~~~~~---i~~lt~~el~~l~~~~~~ 77 (229)
T cd08562 1 IIAHRGASSLAPENTLAAFRAAAELGVRWVEFDVKLSGDGTLVLIHDDTLDRTTNGSGA---VTELTWAELAQLDAGSWF 77 (229)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEEeECCCCCEEEEcCCCCccccCCCce---eecCcHHHHhhcCCCccc
Confidence 69999999999999999999999999999999999999999999999999999996543 23566777765 34677
Q ss_pred ccccCHHHHhchhhhh
Q 010671 488 SFSLIWDEIQTLIRKL 503 (504)
Q Consensus 488 ~~~~t~~ei~tL~~~~ 503 (504)
...++.+.+++|++.|
T Consensus 78 ~~~~~~~~iptl~evl 93 (229)
T cd08562 78 SPEFAGEPIPTLADVL 93 (229)
T ss_pred CCCCCCCCCCCHHHHH
Confidence 7777778888888765
No 62
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=99.82 E-value=9e-21 Score=185.22 Aligned_cols=71 Identities=27% Similarity=0.316 Sum_probs=62.0
Q ss_pred eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc
Q 010671 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (504)
Q Consensus 409 ~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~ 482 (504)
+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||++|+|+|+..+.. ...++.+++.
T Consensus 1 ~iiaHRG~~~~~pENTl~af~~A~~~Gad~iE~DV~lT~Dg~~Vv~HD~~l~R~t~~~g~v---~~~t~~eL~~ 71 (226)
T cd08568 1 IILGHRGYRAKYPENTLEAFKKAIEYGADGVELDVWLTKDGKLVVLHDENLKRVGGVDLKV---KELTYKELKK 71 (226)
T ss_pred CEEeccCCCCCCCcchHHHHHHHHHcCcCEEEEEEEEcCCCCEEEECCCcccccCCCCcee---ecCCHHHHhh
Confidence 4899999999999999999999999999999999999999999999999999999865432 3445555554
No 63
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=99.82 E-value=9.9e-21 Score=189.32 Aligned_cols=93 Identities=24% Similarity=0.279 Sum_probs=77.3
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CC
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SG 485 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~ 485 (504)
|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|++.+.. ...+..|++.. +.
T Consensus 1 p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~~~v---~~~t~~el~~l~~~~ 77 (264)
T cd08575 1 PLHIAHRGGAAEFPENTIAAFRHAVKNGADMLELDVQLTKDGQVVVFHDWDLDRLTGGSGLV---SDLTYAELPPLDAGY 77 (264)
T ss_pred CeEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEEcCCcccceeCCceEE---ecCCHHHHHhcccCC
Confidence 68999999999999999999999999999999999999999999999999999999975432 35666677663 34
Q ss_pred ccccc---------cCHHHHhchhhhh
Q 010671 486 IFSFS---------LIWDEIQTLIRKL 503 (504)
Q Consensus 486 ~~~~~---------~t~~ei~tL~~~~ 503 (504)
||..+ +..+.|++|++.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~iptL~evl 104 (264)
T cd08575 78 GYTFDGGKTGYPRGGGDGRIPTLEEVF 104 (264)
T ss_pred ccccCCCCcccccCCCCCcCCcHHHHH
Confidence 44322 5566788888765
No 64
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=99.82 E-value=9.6e-21 Score=188.78 Aligned_cols=91 Identities=23% Similarity=0.280 Sum_probs=76.8
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CCcc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SGIF 487 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~~~ 487 (504)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+.. ...++.|++.. +.||
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l~R~t~~~g~v---~~~t~~el~~l~~~~~~ 77 (258)
T cd08573 1 IIGHRGAGHDAPENTLAAFRQAKKNGADGVEFDLEFTKDGVPVLMHDDTVDRTTDGTGLV---AELTWEELRKLNAAAKH 77 (258)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeECCCCcEEEECCCCcceecCCCceE---ecCcHHHHhhCCCCCCC
Confidence 689999999999999999999999999999999999999999999999999999965432 35677777763 3555
Q ss_pred c--cccCHHHHhchhhhh
Q 010671 488 S--FSLIWDEIQTLIRKL 503 (504)
Q Consensus 488 ~--~~~t~~ei~tL~~~~ 503 (504)
. ..|..+.|++|++.|
T Consensus 78 ~~~~~~~~~~iptL~evl 95 (258)
T cd08573 78 RLSSRFPGEKIPTLEEAV 95 (258)
T ss_pred CCccccCCCCCCCHHHHH
Confidence 3 346667888888765
No 65
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=99.82 E-value=1.2e-20 Score=186.25 Aligned_cols=91 Identities=26% Similarity=0.246 Sum_probs=78.4
Q ss_pred eEeeCCCCCCC-CCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CC
Q 010671 409 LVISKNGASGD-YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SG 485 (504)
Q Consensus 409 ~iiaHRG~~~~-~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~ 485 (504)
+||||||+++. +||||++||++|++.|+|+||+|||+||||++||+||.+++|+|++.+. ....++.+++.. +.
T Consensus 1 ~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~DV~~T~Dg~~vv~HD~~l~r~t~~~~~---v~~~t~~el~~l~~~~ 77 (240)
T cd08566 1 LVVAHRGGWGAGAPENSLAAIEAAIDLGADIVEIDVRRTKDGVLVLMHDDTLDRTTNGKGK---VSDLTLAEIRKLRLKD 77 (240)
T ss_pred CeEecCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCCccccCCCCc---hhhCcHHHHHhCCcCC
Confidence 48999999999 9999999999999999999999999999999999999999999997543 235677777763 45
Q ss_pred ccccccCHHHHhchhhhh
Q 010671 486 IFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 486 ~~~~~~t~~ei~tL~~~~ 503 (504)
|| ..++.+.|+||++.|
T Consensus 78 ~~-~~~~~~~iptL~evl 94 (240)
T cd08566 78 GD-GEVTDEKVPTLEEAL 94 (240)
T ss_pred Cc-CCCCCCCCCCHHHHH
Confidence 66 567788888888766
No 66
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=99.81 E-value=4.4e-21 Score=197.80 Aligned_cols=127 Identities=46% Similarity=0.640 Sum_probs=118.4
Q ss_pred HHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccceeEeeC
Q 010671 334 LDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLLVISK 413 (504)
Q Consensus 334 ~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~~iiaH 413 (504)
..+|..|+++++|.+.++....|+|++++..++..++.++.+.++++..|+|-+....+.|+.+.+ ...|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ 74 (341)
T KOG2258|consen 2 DDAHIAGLEVFASGFANDFSLAFNYSYALILVTLAFLLNVLFSLLFLFSDPPPTASAHKNLFLHIG-------GWLIIAH 74 (341)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHhhhhhhhHhhhcCCccchhhhHHHhcCCC-------CceeEec
Confidence 467899999999999998888999999998898999999999999999999999999999998753 6789999
Q ss_pred CCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCC
Q 010671 414 NGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQ 467 (504)
Q Consensus 414 RG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~ 467 (504)
||++|.+||||++||++|++.|+|.|||||++|+||++|++||.+..|++++..
T Consensus 75 rga~g~~penT~~A~~~a~~~Gad~ie~dV~~TsDg~~v~l~d~~~~r~~~v~~ 128 (341)
T KOG2258|consen 75 RGASGDAPENTLAAYKKAIADGADLIELDVQMTSDGVPVILHDSTTVRVTGVPE 128 (341)
T ss_pred cCCCCCCCcccHHHHHHHHHcCCcEEEeccccCCCCceEEeecCcceeeeccee
Confidence 999999999999999999999999999999999999999999999999998754
No 67
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.81 E-value=2.1e-20 Score=185.90 Aligned_cols=92 Identities=33% Similarity=0.328 Sum_probs=75.3
Q ss_pred eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCC--CCCcccCcccchhhhccC--C
Q 010671 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNA--AQSKFNSITTTIPEIMAG--S 484 (504)
Q Consensus 409 ~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~--~~~~~~~~~~~~~~~~~~--~ 484 (504)
+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||++|+|+|++ .+. -...|..|++.. +
T Consensus 2 ~iiaHRG~~~~~pENT~~af~~A~~~G~d~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~g~---v~~~t~~el~~l~~~ 78 (256)
T cd08601 2 AVIAHRGASGYAPEHTFAAYDLAREMGADYIELDLQMTKDGVLVAMHDETLDRTTNIERPGP---VKDYTLAEIKQLDAG 78 (256)
T ss_pred ceEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeECCCCeEEEeCCCccccccCCCCCce---eecCcHHHHHhcCCC
Confidence 689999999999999999999999999999999999999999999999999999997 442 235566666653 3
Q ss_pred Ccccc--------ccCHHHHhchhhhh
Q 010671 485 GIFSF--------SLIWDEIQTLIRKL 503 (504)
Q Consensus 485 ~~~~~--------~~t~~ei~tL~~~~ 503 (504)
.||.. .++.+.++||++.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~iptL~evl 105 (256)
T cd08601 79 SWFNKAYPEYARESYSGLKVPTLEEVI 105 (256)
T ss_pred ccccccCccccccccCCccCCCHHHHH
Confidence 44432 24567788887765
No 68
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.81 E-value=2.7e-20 Score=182.57 Aligned_cols=91 Identities=26% Similarity=0.296 Sum_probs=77.1
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CCcc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SGIF 487 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~~~ 487 (504)
||||||+++.+||||++||++|++.|+++||+||++||||++||+||.+++|+|++.+.. ...++.|++.. +.|+
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~~~vE~Dv~lTkDg~~Vv~HD~~l~r~t~~~~~i---~~~t~~el~~l~~~~~~ 77 (233)
T cd08582 1 VIAHRGASAEAPENTLAAFELAWEQGADGIETDVRLTKDGELVCVHDPTLKRTSGGDGAV---SDLTLAELRKLDIGSWK 77 (233)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEEEEccCCCEEEecCCccccccCCCcch---hhCCHHHHhcCCCCccc
Confidence 699999999999999999999999999999999999999999999999999999975532 35666677653 4666
Q ss_pred ccccCHHHHhchhhhh
Q 010671 488 SFSLIWDEIQTLIRKL 503 (504)
Q Consensus 488 ~~~~t~~ei~tL~~~~ 503 (504)
...+..+.|+||++.|
T Consensus 78 ~~~~~~~~iptL~evl 93 (233)
T cd08582 78 GESYKGEKVPTLEEYL 93 (233)
T ss_pred CCCCCCCcCCCHHHHH
Confidence 6666777788888765
No 69
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=99.81 E-value=3.2e-20 Score=181.72 Aligned_cols=93 Identities=29% Similarity=0.332 Sum_probs=73.7
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CC
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SG 485 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~ 485 (504)
++||||||+++.+||||++||++|++.||++||||||+||||++||+||++|+|+|++.+. -...++.|++.. +.
T Consensus 1 ~~iiaHRG~~~~~pENT~~Af~~A~~~g~~~vE~DV~~TkDg~~Vv~HD~~l~r~t~~~~~---i~~~t~~el~~l~~~~ 77 (230)
T cd08563 1 TLIFAHRGYSGTAPENTLLAFKKAIEAGADGIELDVHLTKDGQLVVIHDETVDRTTNGKGY---VKDLTLEELKKLDAGS 77 (230)
T ss_pred CeEEEccCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCcccccCCCCc---hhhCCHHHHHhcCCCC
Confidence 3799999999999999999999999999999999999999999999999999999986542 234555566542 34
Q ss_pred ccccccCHHHHhchhhhh
Q 010671 486 IFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 486 ~~~~~~t~~ei~tL~~~~ 503 (504)
+|...++-+.+++|++.+
T Consensus 78 ~~~~~~~~~~iptL~evl 95 (230)
T cd08563 78 WFDEKFTGEKIPTLEEVL 95 (230)
T ss_pred ccCccCCCCcCCCHHHHH
Confidence 444444445566666543
No 70
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.80 E-value=3.3e-20 Score=182.44 Aligned_cols=86 Identities=24% Similarity=0.290 Sum_probs=69.5
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CCcc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SGIF 487 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~~~ 487 (504)
||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|++.+.. ...+..|++.. +.||
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~~TkDg~~Vv~HD~~l~r~t~~~g~v---~~~t~~el~~l~~~~~~ 77 (235)
T cd08565 1 IAGHRGGRNLWPENTLEGFRKALELGVDAVEFDVHLTADGEVVVIHDPTLDRTTHGTGAV---RDLTLAERKALRLRDSF 77 (235)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEeEEEccCCCEEEECCChhhcccCCCCce---eeccHHHHhcCCCCCCC
Confidence 689999999999999999999999999999999999999999999999999999965432 34555566553 3343
Q ss_pred ccccCHHHHhchhhhh
Q 010671 488 SFSLIWDEIQTLIRKL 503 (504)
Q Consensus 488 ~~~~t~~ei~tL~~~~ 503 (504)
.+.|+||++.|
T Consensus 78 -----~~~iptL~evl 88 (235)
T cd08565 78 -----GEKIPTLEEVL 88 (235)
T ss_pred -----CCCCCCHHHHH
Confidence 24466666544
No 71
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=99.80 E-value=3.8e-20 Score=179.94 Aligned_cols=87 Identities=23% Similarity=0.176 Sum_probs=68.5
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccCC--Ccc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS--GIF 487 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~~--~~~ 487 (504)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+.. ...++.+++... .|
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~Gad~vE~DV~~T~Dg~~vv~HD~~l~r~t~~~~~v---~~~t~~el~~l~~~~~- 76 (220)
T cd08579 1 IIAHRGVSSNGVENTLEALEAAIKAKPDYVEIDVQETKDGQFVVMHDANLKRLAGVNKKV---WDLTLEELKKLTIGEN- 76 (220)
T ss_pred CeeccCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcCCchhhccCCCCCh---hhCCHHHHhcCcCccC-
Confidence 699999999999999999999999999999999999999999999999999999865432 244555555432 22
Q ss_pred ccccCHHHHhchhhhh
Q 010671 488 SFSLIWDEIQTLIRKL 503 (504)
Q Consensus 488 ~~~~t~~ei~tL~~~~ 503 (504)
+..+.|+||++.|
T Consensus 77 ---~~~~~iptL~evl 89 (220)
T cd08579 77 ---GHGAKIPSLDEYL 89 (220)
T ss_pred ---CCCCcCCCHHHHH
Confidence 2234555655543
No 72
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=99.80 E-value=4.9e-20 Score=180.96 Aligned_cols=57 Identities=35% Similarity=0.481 Sum_probs=55.5
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCC
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAA 466 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~ 466 (504)
|+||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 1 iiAHRG~~~~~pENT~~af~~a~~~g~d~vE~Dv~lTkDg~~vv~HD~~l~R~t~~~ 57 (234)
T cd08570 1 VIGHRGYKAKYPENTLLAFEKAVEAGADAIETDVHLTKDGVVVISHDPNLKRCFGKD 57 (234)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeEccCCcEEEeCCCccceeeCCC
Confidence 689999999999999999999999999999999999999999999999999999865
No 73
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=99.79 E-value=7e-20 Score=181.99 Aligned_cols=93 Identities=31% Similarity=0.344 Sum_probs=78.3
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--C
Q 010671 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--S 484 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~ 484 (504)
.|+||||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|||+..+.. ...+..++... +
T Consensus 5 ~~~iiaHRG~s~~~PENTl~Af~~A~~~gad~iE~Dv~lTkDg~lVv~HD~~~drt~~~~~~~---~~~~~~~~~~~~~~ 81 (257)
T COG0584 5 MPLIIAHRGASGYAPENTLAAFELAAEQGADYIELDVQLTKDGVLVVIHDETLDRTTNGLGTV---RDLTLAELKRLDAG 81 (257)
T ss_pred ceEEEeccCcCCCCCcchHHHHHHHHHcCCCEEEeeccCccCCcEEEecccchhhhccCcccc---ccCChhhhcCcccC
Confidence 579999999999999999999999999999999999999999999999999999999854422 24455555543 4
Q ss_pred CccccccCHHHHhchhhhh
Q 010671 485 GIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 485 ~~~~~~~t~~ei~tL~~~~ 503 (504)
.|+...+ .+.+++|++.+
T Consensus 82 ~~~~~~~-~~~ip~l~~~l 99 (257)
T COG0584 82 SFRIPTF-GEEIPTLEELL 99 (257)
T ss_pred cccCCCC-CCccCCHHHHH
Confidence 6667777 88888888765
No 74
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.79 E-value=7.5e-20 Score=182.15 Aligned_cols=55 Identities=29% Similarity=0.313 Sum_probs=53.3
Q ss_pred eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCccccc
Q 010671 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINST 463 (504)
Q Consensus 409 ~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t 463 (504)
.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|
T Consensus 2 ~iiaHRG~~~~~pENT~~Af~~A~~~Gad~vE~DV~~TkDg~~Vv~HD~~l~r~~ 56 (263)
T cd08567 2 DLQGHRGARGLLPENTLPAFAKALDLGVDTLELDLVLTKDGVIVVSHDPKLNPDI 56 (263)
T ss_pred ceEeccCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEcCCCCEEEeCCCccCcce
Confidence 5899999999999999999999999999999999999999999999999999765
No 75
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.78 E-value=1.5e-19 Score=179.15 Aligned_cols=91 Identities=26% Similarity=0.268 Sum_probs=72.2
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CCcc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SGIF 487 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~~~ 487 (504)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+.. ...++.|++.. ..||
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~g~d~vE~Dv~~TkDg~~Vv~HD~~l~r~t~~~~~i---~~~t~~el~~l~~~~~~ 77 (249)
T cd08561 1 VIAHRGGAGLAPENTLLAFEDAVELGADVLETDVHATKDGVLVVIHDETLDRTTDGTGPV---ADLTLAELRRLDAGYHF 77 (249)
T ss_pred CcccCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeECCCCCEEEECCCccccccCCCCch---hhCCHHHHhhcCcCccc
Confidence 689999999999999999999999999999999999999999999999999999976532 34566666653 2343
Q ss_pred cc--------ccCHHHHhchhhhh
Q 010671 488 SF--------SLIWDEIQTLIRKL 503 (504)
Q Consensus 488 ~~--------~~t~~ei~tL~~~~ 503 (504)
+. .+..+.+++|++.|
T Consensus 78 ~~~~~~~~~~~~~~~~iptL~evl 101 (249)
T cd08561 78 TDDGGRTYPYRGQGIRIPTLEELF 101 (249)
T ss_pred cCccccccccCCCCccCCCHHHHH
Confidence 21 23345677776654
No 76
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.78 E-value=1.8e-19 Score=180.22 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=73.6
Q ss_pred cceeEeeCCCCCCC--CCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCccc--------ccCCCCCcccCccc
Q 010671 406 ANLLVISKNGASGD--YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN--------STNAAQSKFNSITT 475 (504)
Q Consensus 406 ~~~~iiaHRG~~~~--~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r--------~t~~~~~~~~~~~~ 475 (504)
.+|+||||||+++. +||||++||++|++.|||+||+|||+||||++||+||.++++ ++++.+. -...
T Consensus 2 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~~~~~~~~~~~~~~~~---v~~~ 78 (265)
T cd08564 2 VRPIIVGHRGAGCSTLYPENTLPSFRRALEIGVDGVELDVFLTKDNEIVVFHGTEDDTNPDTSIQLDDSGFKN---INDL 78 (265)
T ss_pred CCceEEEeCCCCCCCCCCchhHHHHHHHHHcCCCEEEEeeEECCCCCEEEEcCCccccCccccccccCCCccc---hhhC
Confidence 36899999999988 999999999999999999999999999999999999987655 5554332 2355
Q ss_pred chhhhccC--CCcccc------ccCHHHHhchhhhh
Q 010671 476 TIPEIMAG--SGIFSF------SLIWDEIQTLIRKL 503 (504)
Q Consensus 476 ~~~~~~~~--~~~~~~------~~t~~ei~tL~~~~ 503 (504)
++.+++.. +.||.. .+..+.|+||++.|
T Consensus 79 t~~el~~l~~~~~~~~~~~~~~~~~~~~iptL~evl 114 (265)
T cd08564 79 SLDEITRLHFKQLFDEKPCGADEIKGEKIPTLEDVL 114 (265)
T ss_pred cHHHHhhcccCcccccCcccccccCCccCCCHHHHH
Confidence 66666653 345432 24556788887765
No 77
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=99.78 E-value=3.1e-19 Score=180.21 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=78.0
Q ss_pred ccccceeEeeCCCCCCC----------------------CCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 403 SKSANLLVISKNGASGD----------------------YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 403 ~~~~~~~iiaHRG~~~~----------------------~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
.....|+||||||++.. +||||++||++|++.|+|+||+|||+||||++||+||.+|+
T Consensus 19 ~~~~~p~iiaHRG~~~~~~~~~v~~~~~t~~~~~~~~~~~pENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVV~HD~tL~ 98 (309)
T cd08613 19 PPGGKPKLLAHRGLAQTFDREGVENDTCTAERIDPPTHDYLENTIASMQAAFDAGADVVELDVHPTKDGEFAVFHDWTLD 98 (309)
T ss_pred CCCCCceEEeccCCCcccccccccccccccccccCcCCCCCchHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEecCccc
Confidence 34557899999999764 49999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccCcccchhhhccC--CCccccc------cCH---HHHhchhhhhC
Q 010671 461 NSTNAAQSKFNSITTTIPEIMAG--SGIFSFS------LIW---DEIQTLIRKLN 504 (504)
Q Consensus 461 r~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~t~---~ei~tL~~~~~ 504 (504)
|+|++.+.+ ...++.|++.. +.||..+ +.. +.|+||++.|+
T Consensus 99 R~T~g~g~V---~dlTlaEL~~Ld~g~~~~~~~g~~~p~~~~~~~~IPTL~EvL~ 150 (309)
T cd08613 99 CRTDGSGVT---RDHTMAELKTLDIGYGYTADGGKTFPFRGKGVGMMPTLDEVFA 150 (309)
T ss_pred cccCCCCch---hhCCHHHHhhCCcCcccccccccccccccCCCCCCcCHHHHHH
Confidence 999976532 46677777764 4555432 111 25888887653
No 78
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.78 E-value=2e-19 Score=182.56 Aligned_cols=58 Identities=28% Similarity=0.416 Sum_probs=55.3
Q ss_pred eEeeCCCCC--------CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCC
Q 010671 409 LVISKNGAS--------GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAA 466 (504)
Q Consensus 409 ~iiaHRG~~--------~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~ 466 (504)
+||||||++ +.+||||++||+.|++.|||+||+|||+||||++||+||.+++|+|++.
T Consensus 1 ~viaHRG~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDG~lVv~HD~~l~r~~~~~ 66 (293)
T cd08572 1 LVIGHRGLGKNYASGSLAGIRENTIASFLAAAKHGADMVEFDVQLTKDGVPVIYHDFTISVSEKSK 66 (293)
T ss_pred CceEecCCCCCcCcccccCcCcccHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCcceeecccc
Confidence 589999997 7999999999999999999999999999999999999999999999854
No 79
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=99.77 E-value=2.8e-19 Score=176.08 Aligned_cols=88 Identities=24% Similarity=0.137 Sum_probs=67.2
Q ss_pred eeEeeCCCCCCC---CCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccCC
Q 010671 408 LLVISKNGASGD---YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (504)
Q Consensus 408 ~~iiaHRG~~~~---~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~~ 484 (504)
+.+|||||+++. +||||++||++|++.|+ +||+|||+||||++||+||.+|+|+|++.+.. ...++.|++...
T Consensus 4 ~~~iaHRG~~~~~~~~pENTl~af~~A~~~G~-~iE~DV~lT~Dg~lVv~HD~~l~r~t~~~~~v---~~~t~~eL~~l~ 79 (237)
T cd08585 4 DRPIAHRGLHDRDAGIPENSLSAFRAAAEAGY-GIELDVQLTADGEVVVFHDDNLKRLTGVEGRV---EELTAAELRALR 79 (237)
T ss_pred CCceECCCCCCCCCCCCccHHHHHHHHHHcCC-cEEEEeeECCCCCEEEeccchHhhhcCCCCcc---ccCCHHHHhcCC
Confidence 458999999874 79999999999999999 79999999999999999999999999975532 344555555432
Q ss_pred CccccccCHHHHhchhhhh
Q 010671 485 GIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 485 ~~~~~~~t~~ei~tL~~~~ 503 (504)
-- ...+.||||++.|
T Consensus 80 ~~----~~~~~iPtL~evl 94 (237)
T cd08585 80 LL----GTDEHIPTLDEVL 94 (237)
T ss_pred CC----CCCCCCCCHHHHH
Confidence 00 0234566665544
No 80
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=99.77 E-value=2.7e-19 Score=181.10 Aligned_cols=95 Identities=20% Similarity=0.184 Sum_probs=71.9
Q ss_pred eEeeCCCCC-------CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCC-------cccCcc
Q 010671 409 LVISKNGAS-------GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQS-------KFNSIT 474 (504)
Q Consensus 409 ~iiaHRG~~-------~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~-------~~~~~~ 474 (504)
+.|||||++ +.+||||++||+.|++.|||+||+|||+||||++||+||.+|+|+++..+. ...-..
T Consensus 1 ~~iaHRG~~~~~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkDg~~VV~HD~~l~r~~~~~~~~~~~~~~~~~v~~ 80 (290)
T cd08607 1 LDVGHRGAGNSYTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKDLVPVVYHDFTLRVSLKSKGDSDRDDLLEVPVKD 80 (290)
T ss_pred CceecCCCCcCcccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCeeEeeccCccccCccceEEEeccc
Confidence 369999994 899999999999999999999999999999999999999999999985320 112235
Q ss_pred cchhhhccCC-----CccccccC----------HHHHhchhhhh
Q 010671 475 TTIPEIMAGS-----GIFSFSLI----------WDEIQTLIRKL 503 (504)
Q Consensus 475 ~~~~~~~~~~-----~~~~~~~t----------~~ei~tL~~~~ 503 (504)
.|+.|++... .||...+. .+.|+||++.|
T Consensus 81 lt~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl 124 (290)
T cd08607 81 LTYEQLKLLKLFHISALKVKEYKSVEEDEDPPEHQPFPTLSDVL 124 (290)
T ss_pred CCHHHHhhcCcccccccccccccccccccccccccCCCCHHHHH
Confidence 5566666532 24443332 34577777655
No 81
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=99.76 E-value=5.8e-19 Score=178.41 Aligned_cols=92 Identities=20% Similarity=0.176 Sum_probs=72.1
Q ss_pred eeEeeCCCCCCCCC--------CchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhh
Q 010671 408 LLVISKNGASGDYP--------SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPE 479 (504)
Q Consensus 408 ~~iiaHRG~~~~~p--------enT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~ 479 (504)
+.||||||+++.+| |||++||++|++.|+|+||+|||+||||++||+||.+++|+ +..+. -...++.|
T Consensus 2 ~~iiaHRG~~~~~p~~~~~~~pENTl~af~~A~~~g~d~vE~DV~lTkDg~~VV~HD~~l~rt-~~~~~---v~~lt~~e 77 (286)
T cd08606 2 VQVIGHRGLGKNTAERKSLQLGENTVESFILAASLGASYVEVDVQLTKDLVPVIYHDFLVSET-GTDVP---IHDLTLEQ 77 (286)
T ss_pred ceEEEeCCCCCCcccccccCcCcchHHHHHHHHHcCCCEEEEEEEEccCCEEEEeCCCeeccC-CCCCc---cccCCHHH
Confidence 57999999999999 99999999999999999999999999999999999999995 53332 23566666
Q ss_pred hccCC------CccccccCH--------HHHhchhhhh
Q 010671 480 IMAGS------GIFSFSLIW--------DEIQTLIRKL 503 (504)
Q Consensus 480 ~~~~~------~~~~~~~t~--------~ei~tL~~~~ 503 (504)
++... .|+...|.. +.|+||++.|
T Consensus 78 L~~ld~~~~~~~~~~~~~~~~~~g~~~~~~iptL~evl 115 (286)
T cd08606 78 FLHLSRMKYTVDFKKKGFKGNSRGHSIQAPFTTLEELL 115 (286)
T ss_pred HHhhhcccccccccccCCCCcccccccccCCCcHHHHH
Confidence 66431 244444432 3468887765
No 82
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=99.74 E-value=2.6e-18 Score=168.22 Aligned_cols=55 Identities=38% Similarity=0.480 Sum_probs=50.3
Q ss_pred CCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCC
Q 010671 413 KNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQ 467 (504)
Q Consensus 413 HRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~ 467 (504)
|||+++.+||||++||++|++.|+++||+|||+||||++||+||.+++|+|++.+
T Consensus 1 HRG~~~~~pENTl~af~~A~~~G~~~iE~Dv~lTkDg~~Vv~HD~~l~r~~~~~~ 55 (256)
T PF03009_consen 1 HRGASGNAPENTLAAFRAAIELGADGIELDVQLTKDGVPVVFHDDTLDRTTGGDG 55 (256)
T ss_dssp TTTTTTTSSTTSHHHHHHHHHTTSSEEEEEEEE-TTS-EEE-SSSBSTTTSSTES
T ss_pred CCCCCCCChhhHHHHHHHHHHhCCCeEcccccccCCceeEeccCCeeeeecCCCc
Confidence 9999999999999999999999999999999999999999999999999999654
No 83
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=99.71 E-value=1.2e-17 Score=168.55 Aligned_cols=95 Identities=22% Similarity=0.206 Sum_probs=72.0
Q ss_pred EeeCCCCCC-----------CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchh
Q 010671 410 VISKNGASG-----------DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIP 478 (504)
Q Consensus 410 iiaHRG~~~-----------~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~ 478 (504)
||||||+.. .+||||++||++|++.|||+||+|||+||||+|||+||.+|+|++++......-...|+.
T Consensus 2 ~ighrg~~~~~~~~~~~~~~~~~ENTl~Af~~A~~~Gad~vE~DV~lTkDg~~VV~HD~~l~r~~~g~~~~~~V~dlT~~ 81 (282)
T cd08605 2 VIGHRGLGMNRASHQPSVGPGIRENTIASFIAASKFGADFVEFDVQVTRDGVPVIWHDDFIVVERGGEVESSRIRDLTLA 81 (282)
T ss_pred eEeccCCCcCcccccccccCCCCCcHHHHHHHHHHcCCCEEEEEEEECcCCeEEEECCCceecccCCCcCccchhhCcHH
Confidence 799999764 346999999999999999999999999999999999999999999852111223466777
Q ss_pred hhccCC--Ccccc-------cc------------CHHHHhchhhhhC
Q 010671 479 EIMAGS--GIFSF-------SL------------IWDEIQTLIRKLN 504 (504)
Q Consensus 479 ~~~~~~--~~~~~-------~~------------t~~ei~tL~~~~~ 504 (504)
|++... .|+.+ .| ..+.|+||++.|+
T Consensus 82 EL~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~ 128 (282)
T cd08605 82 ELKALGPQAESTKTSTVALYRKAKDPEPEPWIMDVEDSIPTLEEVFS 128 (282)
T ss_pred HHHhccccccccccCcchhhccccccccccccccccCCCCCHHHHHH
Confidence 777643 23311 01 2467999988763
No 84
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.70 E-value=1.2e-17 Score=164.25 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=50.4
Q ss_pred EeeCCCC--CCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccc
Q 010671 410 VISKNGA--SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINS 462 (504)
Q Consensus 410 iiaHRG~--~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~ 462 (504)
+|||||+ ++.+||||++||++|++.|+|+||+|||+||||++||+||++++|+
T Consensus 1 ~~aHRG~G~~~~~pENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~~~r~ 55 (237)
T cd08583 1 LIAHAMGGIDGKTYTNSLDAFEHNYKKGYRVFEVDLSLTSDGVLVARHSWDESLL 55 (237)
T ss_pred CeeecCCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeEccCCCEEEEECCcCchh
Confidence 4899996 7899999999999999999999999999999999999999999875
No 85
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.63 E-value=2.2e-16 Score=149.00 Aligned_cols=55 Identities=25% Similarity=0.260 Sum_probs=53.4
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccC
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~ 464 (504)
||||||+++.+||||++||+.|++.||++||+||++|+||+|||+||.+++|+|.
T Consensus 1 iiaHRG~~~~~peNT~~af~~a~~~G~~~iE~DV~lt~Dg~lvv~HD~~~~r~~~ 55 (179)
T cd08555 1 VLSHRGYSQNGQENTLEAFYRALDAGARGLELDVRLTKDGELVVYHGPTLDRTTA 55 (179)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeEcCCCeEEEECCCccccccC
Confidence 5899999999999999999999999999999999999999999999999999874
No 86
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=99.56 E-value=3.3e-15 Score=140.64 Aligned_cols=47 Identities=38% Similarity=0.589 Sum_probs=46.4
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecC
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSF 456 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd 456 (504)
||||||+++.+||||++||++|++.|+++||+|||+||||++||+||
T Consensus 1 i~aHRG~~~~~pent~~a~~~a~~~g~~~iE~Dv~~tkDg~~vv~Hd 47 (189)
T cd08556 1 IIAHRGASGEAPENTLAAFRKALEAGADGVELDVQLTKDGVLVVIHD 47 (189)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcC
Confidence 68999999999999999999999999999999999999999999999
No 87
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=99.21 E-value=4e-10 Score=111.70 Aligned_cols=220 Identities=16% Similarity=0.147 Sum_probs=123.9
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeE-EEecCCcCcccccccccccccccccccCCCCCCCc
Q 010671 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAG-ICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGW 172 (504)
Q Consensus 94 viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~-Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~ 172 (504)
+||||= ||+.....|+..||. .||+||...++|.+ ..+||.--+.--+... +
T Consensus 2 ~iaHmV-------n~~~~v~~~l~~GAN--aiE~Dv~f~~~~~~~~~~Hg~pcdc~r~c~~------------------~ 54 (265)
T cd08576 2 AIAHMV-------NDLEGVDDALDHGAN--AIEIDVTFWSNGTGWWADHDVPCDCFRGCTA------------------R 54 (265)
T ss_pred cchhhh-------ccHHHHHHHHHcCCC--ceeEEEEEccCCcEEEeeCCCccccccCCcH------------------H
Confidence 567765 999999999999999 99999999999988 5778764332101000 0
Q ss_pred ccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhcc----chHHHHHHHHHHHhc
Q 010671 173 FSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQH----NLSMRSFVLSVSRSV 248 (504)
Q Consensus 173 ~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~----~~~~~~~v~~~l~~~ 248 (504)
-..+-=++++++++. +.|.. =| .-+++++|.+....+. +.++.+++++-.-..
T Consensus 55 ~~f~~~l~~~r~~tt--------pg~~~----------~l-----~lv~lDlK~~~~~~~~~~~ag~~la~~ll~~~w~~ 111 (265)
T cd08576 55 EMFDEILDYRRNGTT--------PGFRE----------NL-----IFVWLDLKNPDLCGECSINAGRDLARKLLEPYWNG 111 (265)
T ss_pred HHHHHHHHHHHhcCC--------CCccc----------ee-----EEEEEEcCCCCcCHHHHHHHHHHHHHHHHHHhhcC
Confidence 011111223332210 00111 01 2378999998776542 334444333322222
Q ss_pred C--Cc---eEecC---CHHHHHHHHHhcCCCCCc------EEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCC
Q 010671 249 V--VN---YISSP---EVNFLRSIAARFRPSMTK------LVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPK 314 (504)
Q Consensus 249 g--~~---~isSf---d~~~L~~l~~~~~~~~~~------lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~ 314 (504)
| .. +++-. +..+++.++..+...... +.+-|-. +. .++.+++..+..+ .
T Consensus 112 ~~~~ra~~~~s~~~~~~~~~~~~~~~~l~~~~~~~~~~~kvg~df~~--------n~-------~l~~~~~~~~~~~--~ 174 (265)
T cd08576 112 GSGARALYGFSIPSITDSRFFKGIRDRLNSEEAVSGLLDKVGKDFSG--------NE-------DLEDIRRVYDYGG--D 174 (265)
T ss_pred CCCeEEEEEEEeccccchHHHHHHHHHHHhcCchhhHHHhhcccccC--------CC-------ChHHHHHHHHhcC--c
Confidence 1 21 23333 456788887766332221 1111111 11 1333333222221 1
Q ss_pred ccccccCccc--c--CCCCHHHHHHHHHcCC-----eEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC
Q 010671 315 DYIWPVDESL--Y--LLPHTTIVLDAHKERL-----EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (504)
Q Consensus 315 ~~i~~~~~~~--~--l~~~~~lV~~ahk~Gl-----~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P 385 (504)
..+|..++-. . ....+.+++.+|++|+ +|++||+++. +++.++++.| |||||||+|
T Consensus 175 ~h~w~~dGitnC~~~~~~~~~lv~~~~~rd~~g~i~kV~vWTVn~~------------~~~~~ll~~G---VDGIITD~P 239 (265)
T cd08576 175 GHIWQSDGITNCLEKYRTCARLREAIKKRDTPGYLGKVYGWTSDKG------------SSVRKLLRLG---VDGIITNYP 239 (265)
T ss_pred CceecCCCcccccccccccHHHHHHHHHcCCCCcCCeEEEEeCCCH------------HHHHHHHhcC---CCEEEECCH
Confidence 1233221100 0 1235789999999999 9999999753 6788898766 999999999
Q ss_pred CChHHHHHHh
Q 010671 386 LTPSAAVDCF 395 (504)
Q Consensus 386 ~~~~~~l~~~ 395 (504)
+.+.++++..
T Consensus 240 ~~i~~~l~~~ 249 (265)
T cd08576 240 KRIIDVLKES 249 (265)
T ss_pred HHHHHHHHhc
Confidence 9888777543
No 88
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.12 E-value=4.5e-11 Score=113.05 Aligned_cols=45 Identities=13% Similarity=0.059 Sum_probs=42.1
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccC
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~ 464 (504)
|||||| ||++||++|++. |+||+|||+| ||++||+||++++|+..
T Consensus 1 IiAHRG-------NTl~AF~~A~~~--dgvE~DVr~t-Dg~lVV~HD~~l~~~Pt 45 (192)
T cd08584 1 IIAHRG-------NTITALKRTFEN--FGVETDIRDY-GGQLVISHDPFVKNGEL 45 (192)
T ss_pred CCccch-------HHHHHHHHHHHC--CEEEEEEEee-CCeEEEECCCCCCCCCC
Confidence 589999 999999999999 9999999999 99999999999987543
No 89
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.11 E-value=7.3e-10 Score=108.54 Aligned_cols=93 Identities=16% Similarity=0.038 Sum_probs=64.2
Q ss_pred HHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCCcccccCCHHHHhcCcccCCc
Q 010671 112 YSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGV 191 (504)
Q Consensus 112 ~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g~~v~d~Tl~EL~~l~~~~~~ 191 (504)
+..|++.|++ +||.||+++ ||+++|.||..+.+... -+.++++++|.++...++
T Consensus 15 l~~Al~~g~~--svEaDV~l~-dg~l~V~Hd~~~l~~~~----------------------tl~~Lyl~pL~~~l~~~n- 68 (228)
T cd08577 15 LYDALSAGFG--SIEADVWLV-NGDLLVAHDEVDLSPAR----------------------TLESLYLDPLLEILDQNN- 68 (228)
T ss_pred hHHHHHcCCC--EEEEeEEEE-CCEEEEEcChhHcCccC----------------------CHHHHhHHHHHHHHHHcC-
Confidence 6789999999 999999999 99999999998877611 367899999987543321
Q ss_pred cCCCCCCCCCCcccCCHHHHHHHh-CCCceEEeeccchhhhccchHHHHHHHHHHHhcCC
Q 010671 192 YSRTDKFDGNGFQILTVQDMARQI-KPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (504)
Q Consensus 192 ~~r~~~~~g~~~~IpTLeEvL~~~-k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~ 250 (504)
+ ... ... ....|+||||.+... ...++..+++-+++.++
T Consensus 69 --------~-~~~--------~~~~~~l~LlIDiKt~g~~---t~~~l~~~L~~~~~~~~ 108 (228)
T cd08577 69 --------G-QAY--------NDPEQPLQLLIDIKTDGES---TYPALEEVLKPYIDIGY 108 (228)
T ss_pred --------C-CCC--------CCCCCceEEEEEECCCChH---HHHHHHHHHHHHHhcCc
Confidence 1 111 111 135699999975431 12455566666666553
No 90
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=98.61 E-value=3.4e-08 Score=100.45 Aligned_cols=56 Identities=14% Similarity=0.057 Sum_probs=44.4
Q ss_pred hHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC
Q 010671 424 TNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (504)
Q Consensus 424 T~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~ 483 (504)
...+|..|.+.|+|+||+|||+||||+|||+||.++.|+ ++.. .-...|+.+++..
T Consensus 17 ~~~sfvtAsslgad~VE~DVqLTkDgvpVV~HD~~i~~t-~~~~---~V~dlTleqL~~l 72 (300)
T cd08578 17 DGNSFVTASSLSGEYLRVKVCVLKDGTPVVAPEWFVPVG-GIKL---LVSDLTAEQLESI 72 (300)
T ss_pred CchhHHHHHHcCCCEEEEEEEECcCCEEEEECCCceEec-CCcE---EeecCcHHHHhcc
Confidence 466899999999999999999999999999999999775 4322 2345566666553
No 91
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=98.02 E-value=6.4e-06 Score=80.16 Aligned_cols=44 Identities=20% Similarity=0.114 Sum_probs=41.0
Q ss_pred CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc
Q 010671 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (504)
Q Consensus 101 ~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~ 146 (504)
.-+.+|||++||+.|++.|++ +||+||+-++||+|||+||.++.
T Consensus 24 ~Ql~~ess~eay~~AL~~GcR--~vElDvwdg~dgePvV~HG~tlt 67 (229)
T cd08592 24 DQLSSESSLEAYARCLRMGCR--CIELDCWDGPDGMPIIYHGHTLT 67 (229)
T ss_pred CccCCccCHHHHHHHHHhCCC--EEEEEeecCCCCCEEEEeCCcCC
Confidence 457899999999999999999 99999999999999999998764
No 92
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=98.01 E-value=6.2e-06 Score=80.26 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=41.3
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCccc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r 461 (504)
-..+|||+.||.+|++.||++||+||+-++||+|||+|+.++..
T Consensus 25 Ql~~ess~eay~~AL~~GcR~vElDvwdg~dgePvV~HG~tlts 68 (229)
T cd08592 25 QLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPIIYHGHTLTS 68 (229)
T ss_pred ccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcCCC
Confidence 56789999999999999999999999999999999999998763
No 93
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=97.89 E-value=3.7e-06 Score=55.55 Aligned_cols=30 Identities=27% Similarity=0.579 Sum_probs=21.9
Q ss_pred eEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCC
Q 010671 342 EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (504)
Q Consensus 342 ~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~ 386 (504)
+|++||++++ +.+..+++.| ||||+||+|+
T Consensus 1 kV~~WT~d~~------------~~~~~~l~~G---VDgI~Td~p~ 30 (30)
T PF13653_consen 1 KVYFWTPDKP------------ASWRELLDLG---VDGIMTDYPD 30 (30)
T ss_dssp EEEEET--SH------------HHHHHHHHHT----SEEEES-HH
T ss_pred CeEEecCCCH------------HHHHHHHHcC---CCEeeCCCCC
Confidence 6899999653 7789999876 9999999984
No 94
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=97.86 E-value=1.7e-05 Score=76.95 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=41.2
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCccc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r 461 (504)
...+|||+.||.+|++.||++||+||+-++||+|||+|+.++..
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~dgePvV~Hg~tlts 68 (229)
T cd08627 25 QFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTT 68 (229)
T ss_pred ccCCcccHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcCCC
Confidence 45789999999999999999999999999999999999998864
No 95
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=97.85 E-value=1.9e-05 Score=76.64 Aligned_cols=44 Identities=18% Similarity=0.094 Sum_probs=40.9
Q ss_pred CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc
Q 010671 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (504)
Q Consensus 101 ~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~ 146 (504)
..+.+|||++||..|+..|++ .||+||+-++||+|||+||.++.
T Consensus 24 ~Ql~~~ss~e~y~~aL~~GcR--~vElD~wdg~dgePvV~Hg~tlt 67 (229)
T cd08627 24 DQFSSESSLEAYARCLRMGCR--CIELDCWDGPDGMPVIYHGHTLT 67 (229)
T ss_pred CccCCcccHHHHHHHHHhCCC--EEEEEeecCCCCCEEEEeCCcCC
Confidence 456789999999999999999 99999999999999999998773
No 96
>KOG2421 consensus Predicted starch-binding protein [General function prediction only]
Probab=97.61 E-value=6e-06 Score=87.75 Aligned_cols=58 Identities=21% Similarity=0.212 Sum_probs=50.7
Q ss_pred CcEEEEeCCCCC-------CCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCccccc
Q 010671 91 PPFVVARGGFSG-------IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASN 150 (504)
Q Consensus 91 ~p~viaHRG~~~-------~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~ 150 (504)
..+-++|||... ..+|||+..+..|++.|+| ++|+|||+|||.++|++||..+..+-.
T Consensus 324 ~~l~~g~rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad--~ve~dvqlt~D~~~vvyh~f~~~~~~~ 388 (417)
T KOG2421|consen 324 LSLNTGHRGNGTSYTVLSQVLRENTIVIVDNVLELGAD--LVEMDVQLTKDLVPVVYHDFVLLVSVI 388 (417)
T ss_pred hhhhccCCcCCchhhhhhhhhccceeeeehhHHHhhhh--HHHhhcccccCCceeeeccceeEEeec
Confidence 467899999532 4689999999999999999 999999999999999999998876533
No 97
>KOG2421 consensus Predicted starch-binding protein [General function prediction only]
Probab=97.34 E-value=4.2e-05 Score=81.40 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=50.5
Q ss_pred eeEeeCCCCC-------CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccC
Q 010671 408 LLVISKNGAS-------GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (504)
Q Consensus 408 ~~iiaHRG~~-------~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~ 464 (504)
.+-++|||.. ....|||...+..+.+.|+|++|+|||+|+|.++|++||-.+...-.
T Consensus 325 ~l~~g~rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~D~~~vvyh~f~~~~~~~ 388 (417)
T KOG2421|consen 325 SLNTGHRGNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTKDLVPVVYHDFVLLVSVI 388 (417)
T ss_pred hhhccCCcCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhcccccCCceeeeccceeEEeec
Confidence 4679999965 25789999999999999999999999999999999999998876543
No 98
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=97.20 E-value=0.00038 Score=69.25 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=38.7
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|++.||++||+||+-++||+|||+|+.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcR~vElD~w~g~~gepvV~Hg~tlt 67 (260)
T cd08597 26 LRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPVIYHGHTLT 67 (260)
T ss_pred ecCccCHHHHHHHHHhCCCEEEEEeEcCCCCCEEEEeCCccc
Confidence 456789999999999999999999999999999999998764
No 99
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=97.19 E-value=0.0004 Score=69.08 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=38.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
-+.-+.|+++|..|+..|++ +||+||+-++||+|||+||.++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--~vElD~w~g~~gepvV~Hg~tl 66 (260)
T cd08597 25 QLRGPSSVEGYVRALQRGCR--CVELDCWDGPNGEPVIYHGHTL 66 (260)
T ss_pred eecCccCHHHHHHHHHhCCC--EEEEEeEcCCCCCEEEEeCCcc
Confidence 35678899999999999999 9999999999999999999865
No 100
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=96.76 E-value=0.0021 Score=58.07 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=40.2
Q ss_pred CCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 417 SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 417 ~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
.....+|+..+|..+++.|++++|+||+.++||.++++|+.++.
T Consensus 23 ~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~~~~~v~Hg~~~~ 66 (135)
T smart00148 23 KQLWGESSVEGYIQALDHGCRCVELDCWDGPDGEPVIYHGHTFT 66 (135)
T ss_pred ccccCcccHHHHHHHHHhCCCEEEEEcccCCCCCEEEEECCccc
Confidence 35678999999999999999999999999999999999998654
No 101
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=96.67 E-value=0.0025 Score=57.46 Aligned_cols=43 Identities=14% Similarity=0.099 Sum_probs=39.6
Q ss_pred CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 101 ~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
...+.+|+..+|..+++.|+. ++|+||+.++||.++++|+.++
T Consensus 23 ~~~~~~~q~~~i~~qL~~GvR--~~dirv~~~~~~~~~v~Hg~~~ 65 (135)
T smart00148 23 KQLWGESSVEGYIQALDHGCR--CVELDCWDGPDGEPVIYHGHTF 65 (135)
T ss_pred ccccCcccHHHHHHHHHhCCC--EEEEEcccCCCCCEEEEECCcc
Confidence 456789999999999999999 9999999999999999999754
No 102
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=96.55 E-value=0.0022 Score=63.08 Aligned_cols=44 Identities=20% Similarity=0.156 Sum_probs=36.5
Q ss_pred eCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccc
Q 010671 412 SKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINS 462 (504)
Q Consensus 412 aHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~ 462 (504)
+|.-.+...| +..|++.||++||.||+++ ||+++|.||..+.|.
T Consensus 5 sHNDY~r~~P------l~~Al~~g~~svEaDV~l~-dg~l~V~Hd~~~l~~ 48 (228)
T cd08577 5 SHNDYWRKRP------LYDALSAGFGSIEADVWLV-NGDLLVAHDEVDLSP 48 (228)
T ss_pred cccccccccc------hHHHHHcCCCEEEEeEEEE-CCEEEEEcChhHcCc
Confidence 4555444444 6789999999999999999 999999999998765
No 103
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=95.36 E-value=0.021 Score=55.69 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=38.7
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
-..-+.+..+|.+|+..||..||+|++=..||+|||+|-.++.
T Consensus 25 Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~~ePvV~HG~tlt 67 (227)
T cd08594 25 QLLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLT 67 (227)
T ss_pred cccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCcc
Confidence 3456888999999999999999999999999999999988764
No 104
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=95.29 E-value=0.023 Score=55.44 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=38.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+|++=-.||+|||+|..++
T Consensus 25 Ql~~~ss~e~Y~~aL~~GcR--cvElD~wdg~~~ePvV~HG~tl 66 (227)
T cd08594 25 QLLSQSRVDMYARVLQAGCR--CVEVDCWDGPDGEPVVHHGYTL 66 (227)
T ss_pred cccCcccHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCCc
Confidence 46678999999999999999 9999999999999999998765
No 105
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=95.17 E-value=0.026 Score=55.90 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=38.9
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
-...+.+..+|.+|+..||.+||+|++=-.||.|||+|-.++.
T Consensus 25 Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~tlt 67 (254)
T cd08633 25 QLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPIVHHGYTLT 67 (254)
T ss_pred ccCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCcc
Confidence 3556788999999999999999999999999999999998874
No 106
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=94.96 E-value=0.032 Score=55.57 Aligned_cols=42 Identities=14% Similarity=0.172 Sum_probs=38.3
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|+..||.+||+|++=-.||.|||+|-.++.
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlt 67 (258)
T cd08631 26 LRGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTFT 67 (258)
T ss_pred ccCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCccc
Confidence 345779999999999999999999999999999999998874
No 107
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=94.91 E-value=0.035 Score=55.17 Aligned_cols=42 Identities=14% Similarity=0.154 Sum_probs=38.3
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.+..+|.+|+..||.+||+|++=.+||.|||+|-.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdG~~~eP~V~HG~tlt 67 (254)
T cd08596 26 LKGESSVELYSQVLLTGCRCVELDCWDGDDGMPIIYHGHTLT 67 (254)
T ss_pred cCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCcc
Confidence 445788999999999999999999999999999999998874
No 108
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=94.91 E-value=0.038 Score=54.04 Aligned_cols=43 Identities=19% Similarity=0.147 Sum_probs=38.6
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
-...+.+..+|.+|+..||.+||+|++=..||.|+|+|-.++.
T Consensus 25 Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~t 67 (226)
T cd08558 25 QLTGESSVEAYIRALLRGCRCVELDCWDGPDGEPVVYHGHTLT 67 (226)
T ss_pred ccCCccCHHHHHHHHHhCCcEEEEEeecCCCCCeEEeeCCCCc
Confidence 3456789999999999999999999999999999999987764
No 109
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=94.90 E-value=0.034 Score=55.04 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=37.9
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.+..+|.+|+..||.+||+|++=..||.|||+|-.++.
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~Tlt 67 (253)
T cd08632 26 LLSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLT 67 (253)
T ss_pred ccCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCCc
Confidence 345778999999999999999999999999999999988764
No 110
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=94.90 E-value=0.035 Score=55.08 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=38.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+..+.|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~Wdg~~~eP~V~HG~tl 66 (254)
T cd08633 25 QLMSQSRVDMYAWVLQAGCR--CVEVDCWDGPDGEPIVHHGYTL 66 (254)
T ss_pred ccCCccCHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCCc
Confidence 46778899999999999999 9999999999999999998766
No 111
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=94.87 E-value=0.034 Score=55.33 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=38.2
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.+..+|.+|+..||.+||+|++=..||.|+|+|-.++.
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlt 67 (257)
T cd08595 26 LVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPVVYHGYTLT 67 (257)
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEecCCCcc
Confidence 456889999999999999999999999999999999988764
No 112
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=94.78 E-value=0.037 Score=55.16 Aligned_cols=42 Identities=17% Similarity=0.153 Sum_probs=38.1
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|+..||.+||+|++=.+||.|+|+|-.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlt 67 (258)
T cd08630 26 IGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPVIYHGHTLT 67 (258)
T ss_pred ccCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCccc
Confidence 445689999999999999999999999999999999998765
No 113
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=94.78 E-value=0.043 Score=53.65 Aligned_cols=43 Identities=19% Similarity=0.143 Sum_probs=38.9
Q ss_pred CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 101 ~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.-+..+.|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 24 ~Ql~~~Ss~~~y~~aL~~GcR--cvElD~wdg~~~eP~v~HG~t~ 66 (226)
T cd08558 24 DQLTGESSVEAYIRALLRGCR--CVELDCWDGPDGEPVVYHGHTL 66 (226)
T ss_pred CccCCccCHHHHHHHHHhCCc--EEEEEeecCCCCCeEEeeCCCC
Confidence 346778999999999999999 9999999999999999998754
No 114
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=94.69 E-value=0.042 Score=54.40 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=38.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+|++=-+||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~Wdg~~~eP~V~HG~Tl 66 (253)
T cd08632 25 QLLSQSKVDMYARVLQAGCR--CVEVDCWDGPDGEPVVHHGYTL 66 (253)
T ss_pred cccCcccHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCCC
Confidence 44567899999999999999 9999999999999999998765
No 115
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=94.68 E-value=0.049 Score=53.37 Aligned_cols=42 Identities=12% Similarity=-0.001 Sum_probs=37.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
-+..+.|.++|..|+..|+. .||+||+=..||.++|+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~Wdg~~~ep~V~HG~t~ 66 (228)
T cd08599 25 QLSSRSSTAPIIEALLRGCR--VIELDLWPGGRGDICVLHGGTL 66 (228)
T ss_pred ccCCccCHHHHHHHHHhCCC--EEEEEeecCCCCCeEEEeCCCC
Confidence 34567889999999999999 9999999999999999998753
No 116
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=94.68 E-value=0.042 Score=54.63 Aligned_cols=42 Identities=12% Similarity=0.117 Sum_probs=38.0
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|+..||.+||+|++=-.||.|+|+|-.++.
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlt 67 (258)
T cd08629 26 LTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFT 67 (258)
T ss_pred cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCc
Confidence 456778999999999999999999999999999999988764
No 117
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=94.66 E-value=0.038 Score=54.93 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=37.6
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.+..+|.+|+..||.+||+|++=-.||.|+|+|-.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~t~t 67 (254)
T cd08628 26 LRSESSTEAYIRCLRMGCRCIELDCWDGPDGKPIIYHGWTRT 67 (254)
T ss_pred eecCCCHHHHHHHHHcCCcEEEEEeecCCCCCeEEeeCCCcc
Confidence 345778999999999999999999999999999999988763
No 118
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=94.66 E-value=0.041 Score=54.73 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=38.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
-+.-+.|.++|..|+..|+. .||+||+=-.||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~tl 66 (257)
T cd08595 25 QLVGPSDLDGYVSALRKGCR--CLEIDCWDGADNEPVVYHGYTL 66 (257)
T ss_pred cccCcccHHHHHHHHHhCCc--EEEEEeecCCCCCcEEecCCCc
Confidence 45679999999999999999 9999999999999999998765
No 119
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=94.62 E-value=0.045 Score=54.36 Aligned_cols=42 Identities=24% Similarity=0.160 Sum_probs=38.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+.-+.|..+|..|+..|+. .||+|++=-+||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdG~~~eP~V~HG~tl 66 (254)
T cd08596 25 QLKGESSVELYSQVLLTGCR--CVELDCWDGDDGMPIIYHGHTL 66 (254)
T ss_pred ccCCccCHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCCc
Confidence 45568999999999999999 9999999999999999998765
No 120
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=94.62 E-value=0.051 Score=53.28 Aligned_cols=53 Identities=15% Similarity=0.063 Sum_probs=41.5
Q ss_pred eeEeeCCCC---CCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 408 LLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 408 ~~iiaHRG~---~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
.+...|+-. .-...+.|..+|.+|++.||..||+||+=..||.|+|+|..++.
T Consensus 12 fI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~ep~V~HG~t~t 67 (228)
T cd08599 12 FIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGDICVLHGGTLT 67 (228)
T ss_pred EEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCeEEEeCCCCc
Confidence 344556432 12345678899999999999999999999999999999987653
No 121
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=94.55 E-value=0.046 Score=54.43 Aligned_cols=42 Identities=17% Similarity=0.077 Sum_probs=38.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
-+.-+.|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~eP~V~HG~tl 66 (258)
T cd08631 25 QLRGQSSVEGYIRALKRGCR--CVEVDVWDGPNGEPIVYHGHTF 66 (258)
T ss_pred cccCccCHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCcc
Confidence 45568899999999999999 9999999999999999998766
No 122
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=94.51 E-value=0.047 Score=54.41 Aligned_cols=42 Identities=17% Similarity=0.049 Sum_probs=38.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+.-+.|..+|..|+..|+. .||+||+=-+||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~eP~V~HG~tl 66 (258)
T cd08630 25 QIGGPSSTEAYVRAFAQGCR--CVELDCWEGPGGEPVIYHGHTL 66 (258)
T ss_pred cccCcccHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCcc
Confidence 45667899999999999999 9999999999999999998765
No 123
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=94.50 E-value=0.047 Score=54.44 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=38.2
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|+..||.+||+|++=..||.|||+|-.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~t 67 (257)
T cd08593 26 LKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPIIYHGHTLT 67 (257)
T ss_pred ccCCccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCccc
Confidence 456789999999999999999999999999999999987764
No 124
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=94.43 E-value=0.054 Score=53.14 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=37.8
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|+..||.+||+|++=..||.|+|+|-.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~ep~V~HG~t~t 67 (231)
T cd08598 26 LAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPVVTHGYTLT 67 (231)
T ss_pred cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCc
Confidence 345788999999999999999999999889999999988764
No 125
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=94.34 E-value=0.056 Score=53.81 Aligned_cols=42 Identities=19% Similarity=0.122 Sum_probs=38.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~eP~V~HG~tl 66 (258)
T cd08629 25 QLTGPSSTEAYIRALCKGCR--CLELDCWDGPNQEPIIYHGYTF 66 (258)
T ss_pred ccCCccCHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCCC
Confidence 45678899999999999999 9999999999999999998765
No 126
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=94.33 E-value=0.06 Score=52.86 Aligned_cols=42 Identities=21% Similarity=0.102 Sum_probs=37.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
-+.-+.|.++|..|+..|+. .||+||+=-.||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~ep~V~HG~t~ 66 (231)
T cd08598 25 QLAGDSSVEGYIRALQRGCR--CVEIDVWDGDDGEPVVTHGYTL 66 (231)
T ss_pred ccCCccCHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCCC
Confidence 45568999999999999999 9999999999999999998755
No 127
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=94.31 E-value=0.054 Score=53.92 Aligned_cols=42 Identities=14% Similarity=0.058 Sum_probs=37.1
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeec--CCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~--Dg~~v~~Hd~~l~ 460 (504)
..-+.+..+|.+|+..||.+||+|++=-. ||.|||+|-.++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlt 69 (257)
T cd08626 26 FGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMC 69 (257)
T ss_pred ccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCc
Confidence 45678899999999999999999999765 8899999998874
No 128
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=94.28 E-value=0.056 Score=53.91 Aligned_cols=42 Identities=21% Similarity=0.089 Sum_probs=38.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~eP~v~HG~t~ 66 (257)
T cd08593 25 QLKGPSSTEAYIRALKKGCR--CVELDCWDGPDGEPIIYHGHTL 66 (257)
T ss_pred cccCCccHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCcc
Confidence 45678899999999999999 9999999999999999998765
No 129
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=94.24 E-value=0.058 Score=53.63 Aligned_cols=41 Identities=20% Similarity=0.091 Sum_probs=37.5
Q ss_pred CCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 103 ~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
+.-+.|..+|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 26 l~~~ss~~~y~~aL~~GcR--cvElD~Wdg~~~eP~V~HG~t~ 66 (254)
T cd08628 26 LRSESSTEAYIRCLRMGCR--CIELDCWDGPDGKPIIYHGWTR 66 (254)
T ss_pred eecCCCHHHHHHHHHcCCc--EEEEEeecCCCCCeEEeeCCCc
Confidence 4568889999999999999 9999999999999999998765
No 130
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=94.03 E-value=0.068 Score=53.26 Aligned_cols=42 Identities=7% Similarity=0.104 Sum_probs=36.9
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeec--CCeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~--Dg~~v~~Hd~~l~ 460 (504)
..-+.|..+|.+|+..||.+||+|++=-. ||.|||+|-.++.
T Consensus 26 l~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlt 69 (258)
T cd08623 26 LAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMT 69 (258)
T ss_pred cCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcc
Confidence 34577899999999999999999999766 6899999998774
No 131
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=94.00 E-value=0.065 Score=53.33 Aligned_cols=42 Identities=19% Similarity=0.065 Sum_probs=37.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEec--CCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTk--Dg~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+||+=-. ||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~~~eP~V~HG~tl 68 (257)
T cd08626 25 QFGGKSSVEMYRQVLLAGCR--CIELDCWDGKGEDQEPIITHGKAM 68 (257)
T ss_pred cccCCccHHHHHHHHHcCCc--EEEEEecCCCCCCCCCEEeeCCCC
Confidence 45678899999999999999 9999999865 889999998776
No 132
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=93.94 E-value=0.071 Score=53.20 Aligned_cols=43 Identities=9% Similarity=0.076 Sum_probs=37.3
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeee--cCCeEEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t--~Dg~~v~~Hd~~l~ 460 (504)
...-+.|..+|.+|+..||.+||+|++=- .||.|||+|-.++.
T Consensus 25 Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlt 69 (261)
T cd08624 25 QFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMT 69 (261)
T ss_pred ccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcc
Confidence 34567899999999999999999999965 37899999998874
No 133
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=93.77 E-value=0.75 Score=45.95 Aligned_cols=186 Identities=14% Similarity=0.139 Sum_probs=101.1
Q ss_pred HHHHHHHHhcCCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHH-HHhhHHHHHh-hhcccccCCcc
Q 010671 239 SFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS-LLKNLTFIKT-FASGILVPKDY 316 (504)
Q Consensus 239 ~~v~~~l~~~g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~-l~~~l~~i~~-~a~gi~~~~~~ 316 (504)
+.+++.+-+.+...+++ .+..++.+...... +.+++..+...+.+.+.. |.. +....++... -+++++... +
T Consensus 46 e~~v~~v~~~g~dav~~-~~G~~~~~~~~y~~-dvplivkl~~~t~l~~~~---~~~~~~~~ve~ai~lgadAV~~~V-y 119 (265)
T COG1830 46 ENIVAKVAEAGADAVAM-TPGIARSVHRGYAH-DVPLIVKLNGSTSLSPDP---NDQVLVATVEDAIRLGADAVGATV-Y 119 (265)
T ss_pred HHHHHHHHhcCCCEEEe-cHhHHhhcCccccC-CcCEEEEeccccccCCCc---ccceeeeeHHHHHhCCCcEEEEEE-e
Confidence 34456666667765543 67888888776533 567776665544444432 322 2222333322 234333211 1
Q ss_pred ccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHH--HHHHhhcCCCcccccccCCCCChHHHHHH
Q 010671 317 IWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE--YLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 317 i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e--~~~~i~~G~~gVDGIiTD~P~~~~~~l~~ 394 (504)
+-.......+..-..++++||+.|+.+.+|..-.......+|..|+... ..++-. ++|+|.|=|+||.-...+.+.
T Consensus 120 ~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaa--elGADIiK~~ytg~~e~F~~v 197 (265)
T COG1830 120 VGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAA--ELGADIIKTKYTGDPESFRRV 197 (265)
T ss_pred cCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHH--HhcCCeEeecCCCChHHHHHH
Confidence 1111111122233568999999999999997643211111133344221 112221 456999999999755444432
Q ss_pred hhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEE
Q 010671 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFID 440 (504)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE 440 (504)
... -+.|+||| -|.+...++..+.-...|++.|+.++-
T Consensus 198 v~~-------~~vpVvia-GG~k~~~~~~~l~~~~~ai~aGa~G~~ 235 (265)
T COG1830 198 VAA-------CGVPVVIA-GGPKTETEREFLEMVTAAIEAGAMGVA 235 (265)
T ss_pred HHh-------CCCCEEEe-CCCCCCChHHHHHHHHHHHHccCcchh
Confidence 221 12466664 233455888899999999999987653
No 134
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=93.54 E-value=0.087 Score=52.57 Aligned_cols=42 Identities=21% Similarity=0.125 Sum_probs=37.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEec--CCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTk--Dg~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+|++=-+ ||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~~~ePvV~HG~tl 68 (261)
T cd08624 25 QFSGLSSPEMYRQVLLSGCR--CVELDCWKGKPPDEEPIITHGFTM 68 (261)
T ss_pred ccCCccCHHHHHHHHHcCCc--EEEEEecCCCCCCCCCEEeeCCCc
Confidence 45678899999999999999 9999999763 789999999876
No 135
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=93.54 E-value=0.091 Score=52.35 Aligned_cols=42 Identities=14% Similarity=0.154 Sum_probs=37.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEec--CCeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTk--Dg~~Vv~HD~~l 145 (504)
-+.-+.|.++|..|+..|+. .||+|++=-. ||.|||+|..++
T Consensus 25 Ql~g~ss~e~y~~aL~~GcR--cvElD~wdG~~~~~ePiV~HG~tl 68 (258)
T cd08623 25 QLAGNSSVEMYRQVLLSGCR--CVELDCWKGRTAEEEPVITHGFTM 68 (258)
T ss_pred ccCCccCHHHHHHHHHcCCC--EEEEEeeCCCCCCCCCEEeeCCCc
Confidence 35568899999999999999 9999999876 689999999765
No 136
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=93.44 E-value=0.099 Score=52.07 Aligned_cols=42 Identities=12% Similarity=0.036 Sum_probs=37.2
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecC--CeEEEecCcCcc
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKD--GVPFCLSFINLI 460 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~D--g~~v~~Hd~~l~ 460 (504)
..-+.+..+|.+|+..||.+||+|++=-.+ |.|+|+|-.++.
T Consensus 26 l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlt 69 (257)
T cd08591 26 FGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMC 69 (257)
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCc
Confidence 445788999999999999999999997774 999999998874
No 137
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=93.31 E-value=5.1 Score=39.83 Aligned_cols=36 Identities=19% Similarity=0.063 Sum_probs=31.2
Q ss_pred chHHHHHHHHHHcCCCCcEEEEeeEEec------CCeEEEecCC
Q 010671 106 DSSSIAYSLTLITSAPSVILWCDVQLTK------DEAGICFPDL 143 (504)
Q Consensus 106 EnT~~a~~~A~~~g~d~~~vE~DVqlTk------Dg~~Vv~HD~ 143 (504)
=|+....+.|+...+. +||.||.+-+ +++||..|-+
T Consensus 11 vNsk~~L~~aL~~~~~--miEaDV~l~~~~~~~~~~~PIMahPP 52 (244)
T PF10223_consen 11 VNSKAELEEALSSDIM--MIEADVLLGGLNTGNEDGIPIMAHPP 52 (244)
T ss_pred cCCHHHHHHHhCCCCC--EEEEEEEeecccCCCCCCCceeeCCC
Confidence 4899999999988888 9999999984 7888888864
No 138
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=93.22 E-value=0.11 Score=51.71 Aligned_cols=42 Identities=19% Similarity=0.055 Sum_probs=37.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecC--CeEEEecCCcC
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKD--EAGICFPDLKL 145 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkD--g~~Vv~HD~~l 145 (504)
.+.-+.|.++|..|+..|+. .||+|++=-.| |.|||+|..++
T Consensus 25 Ql~g~ss~e~y~~aL~~GcR--cvElD~Wdg~~~~~eP~V~HG~tl 68 (257)
T cd08591 25 QFGGKSSVEMYRQVLLSGCR--CIELDCWDGKGEDEEPIITHGKTM 68 (257)
T ss_pred cccCcccHHHHHHHHHhCCc--EEEEEeecCCCCCCCCEEeeCCCC
Confidence 35678999999999999999 99999999875 99999998766
No 139
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=93.15 E-value=0.11 Score=51.79 Aligned_cols=44 Identities=11% Similarity=0.105 Sum_probs=37.5
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeee--cCCeEEEecCcCccc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLIN 461 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t--~Dg~~v~~Hd~~l~r 461 (504)
...-+.|..||.+|+..||.+||+|++=- .|+.|+|+|-.++..
T Consensus 25 Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~ 70 (258)
T cd08625 25 QLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTT 70 (258)
T ss_pred ccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCcccc
Confidence 34568889999999999999999999965 468999999988743
No 140
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=92.53 E-value=0.15 Score=50.97 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=37.3
Q ss_pred CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEe--cCCeEEEecCCcC
Q 010671 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLT--KDEAGICFPDLKL 145 (504)
Q Consensus 101 ~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlT--kDg~~Vv~HD~~l 145 (504)
..+.-+.|.+||..|+..|+. .||+|++=- .|+.|||+|..++
T Consensus 24 ~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~~~eP~v~Hg~t~ 68 (258)
T cd08625 24 GQLTGLSSVEMYRQVLLTGCR--CIELDCWKGRPPEEEPFITHGFTM 68 (258)
T ss_pred CccCCccCHHHHHHHHHcCCC--EEEEEecCCCCCCCCCEEeeCCcc
Confidence 345678999999999999999 999999965 3589999999765
No 141
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=92.31 E-value=0.11 Score=58.35 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=39.9
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
....|.++.||.+|+.+||.+||+|.+=-.||.+|++|-.++.
T Consensus 332 QlrSESSleaYar~LrMGCRCIELDCWdGpd~~pvIyHG~T~T 374 (1267)
T KOG1264|consen 332 QLRSESSLEAYARCLRMGCRCIELDCWDGPDGKPVIYHGHTRT 374 (1267)
T ss_pred ccccccCHHHHHHHHHhCCeEEEeecccCCCCCceEEecccee
Confidence 3568999999999999999999999999999999999998864
No 142
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=90.51 E-value=0.2 Score=56.31 Aligned_cols=44 Identities=16% Similarity=0.060 Sum_probs=40.3
Q ss_pred CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc
Q 010671 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (504)
Q Consensus 101 ~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~ 146 (504)
-..--|+|++||..|+.+|+. .||+|.+=-.||.+|++|..++.
T Consensus 331 DQlrSESSleaYar~LrMGCR--CIELDCWdGpd~~pvIyHG~T~T 374 (1267)
T KOG1264|consen 331 DQLRSESSLEAYARCLRMGCR--CIELDCWDGPDGKPVIYHGHTRT 374 (1267)
T ss_pred cccccccCHHHHHHHHHhCCe--EEEeecccCCCCCceEEecccee
Confidence 345689999999999999999 99999999999999999998763
No 143
>PLN02230 phosphoinositide phospholipase C 4
Probab=88.64 E-value=0.5 Score=52.63 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=38.2
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
....+.|..+|.+|+..||.+||+|++=-.+|.|+|+|-.++.
T Consensus 138 Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~t~t 180 (598)
T PLN02230 138 QLSSNCSELPIADALRRGVRVVELDLWPRGTDDVCVKHGRTLT 180 (598)
T ss_pred cccCccCHHHHHHHHHcCCcEEEEeccCCCCCCcEEeeCCCCc
Confidence 3456778999999999999999999998888999999998875
No 144
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=87.92 E-value=0.56 Score=47.06 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=37.6
Q ss_pred EeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEE-EecCcCcc
Q 010671 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPF-CLSFINLI 460 (504)
Q Consensus 410 iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v-~~Hd~~l~ 460 (504)
+|||| =|++.....|+..||..||+||...++|.+. ..||---+
T Consensus 2 ~iaHm-------Vn~~~~v~~~l~~GANaiE~Dv~f~~~~~~~~~~Hg~pcd 46 (265)
T cd08576 2 AIAHM-------VNDLEGVDDALDHGANAIEIDVTFWSNGTGWWADHDVPCD 46 (265)
T ss_pred cchhh-------hccHHHHHHHHHcCCCceeEEEEEccCCcEEEeeCCCccc
Confidence 57887 4999999999999999999999999999884 56766433
No 145
>PLN02230 phosphoinositide phospholipase C 4
Probab=86.80 E-value=0.69 Score=51.56 Aligned_cols=52 Identities=8% Similarity=-0.006 Sum_probs=44.1
Q ss_pred EEEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcc
Q 010671 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDN 147 (504)
Q Consensus 94 viaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~r 147 (504)
-.+|.- +..+..+.|.++|..|+..|+. .||+|++=-.+|.|||+|..++..
T Consensus 127 ~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~t~t~ 181 (598)
T PLN02230 127 FTGHNSYLTGNQLSSNCSELPIADALRRGVR--VVELDLWPRGTDDVCVKHGRTLTK 181 (598)
T ss_pred ecccCccccCCcccCccCHHHHHHHHHcCCc--EEEEeccCCCCCCcEEeeCCCCcC
Confidence 456764 2456678899999999999999 999999988889999999988754
No 146
>PLN02228 Phosphoinositide phospholipase C
Probab=86.77 E-value=0.76 Score=50.93 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=36.7
Q ss_pred CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCe-EEEecCcCcc
Q 010671 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGV-PFCLSFINLI 460 (504)
Q Consensus 418 ~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~-~v~~Hd~~l~ 460 (504)
-...+.+..+|.+|+..||.+||+|++=-.||. |||+|-.++.
T Consensus 129 Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~t 172 (567)
T PLN02228 129 QVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLT 172 (567)
T ss_pred cccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCEEEeCCccc
Confidence 345678899999999999999999999766676 8999998775
No 147
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=85.73 E-value=0.71 Score=51.96 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=43.9
Q ss_pred eeEeeCCCC---CCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 408 LLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 408 ~~iiaHRG~---~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
.+-.+|.-+ --..-+.+..+|-+|++.||.+||+|++--.+|.|||+|-.++.
T Consensus 299 FI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~Wdg~~~epvV~HG~TlT 354 (746)
T KOG0169|consen 299 FISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCWDGPNGEPVVYHGHTLT 354 (746)
T ss_pred eEeccccceecccccCCccccHHHHHHHHhCCeEEEEecccCCCCCeeEecCcccc
Confidence 344556532 23456889999999999999999999999999999999999885
No 148
>PLN02228 Phosphoinositide phospholipase C
Probab=84.68 E-value=1.1 Score=49.82 Aligned_cols=52 Identities=10% Similarity=-0.043 Sum_probs=42.2
Q ss_pred EEEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCe-EEEecCCcCcc
Q 010671 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEA-GICFPDLKLDN 147 (504)
Q Consensus 94 viaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~-~Vv~HD~~l~r 147 (504)
-.+|.- +..+..+.|.++|..|+..|+. .||+|++=-.||. +||+|..++..
T Consensus 118 ~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~~~p~v~Hg~t~ts 173 (567)
T PLN02228 118 YTGHNSYLTGNQVNSRSSVEPIVQALRKGVK--VIELDLWPNPSGNAAEVRHGRTLTS 173 (567)
T ss_pred ecccCccccCCcccCccCHHHHHHHHHcCCc--EEEEEeccCCCCCCCEEEeCCcccC
Confidence 456765 2456788999999999999999 9999999666665 89999987743
No 149
>PLN02952 phosphoinositide phospholipase C
Probab=84.25 E-value=1.2 Score=49.60 Aligned_cols=52 Identities=17% Similarity=0.206 Sum_probs=40.2
Q ss_pred eEeeCCC---CCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCC-eEEEecCcCcc
Q 010671 409 LVISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDG-VPFCLSFINLI 460 (504)
Q Consensus 409 ~iiaHRG---~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg-~~v~~Hd~~l~ 460 (504)
+-.+|.- +.-...+.|..+|.+|+..||.+||+|++=-.+| .|||+|-.++.
T Consensus 134 I~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~t 189 (599)
T PLN02952 134 IYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLT 189 (599)
T ss_pred eeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEeecCCCCCCCEEEeCCccc
Confidence 3345552 2344567889999999999999999999976665 48999998775
No 150
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=82.77 E-value=1.1 Score=50.49 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=39.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcc
Q 010671 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDN 147 (504)
Q Consensus 102 ~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~r 147 (504)
-..-+.|+.+|-.|++.|+. .||+|++--.+|.|||+|..++..
T Consensus 312 Ql~g~sSvegyI~ALk~GcR--~vElD~Wdg~~~epvV~HG~TlTs 355 (746)
T KOG0169|consen 312 QLGGPSSVEGYIRALKKGCR--CVELDCWDGPNGEPVVYHGHTLTS 355 (746)
T ss_pred ccCCccccHHHHHHHHhCCe--EEEEecccCCCCCeeEecCccccc
Confidence 34568999999999999999 999999999999999999998743
No 151
>PLN02952 phosphoinositide phospholipase C
Probab=82.31 E-value=1.6 Score=48.71 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=42.4
Q ss_pred EEEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCC-eEEEecCCcCcc
Q 010671 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDE-AGICFPDLKLDN 147 (504)
Q Consensus 94 viaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg-~~Vv~HD~~l~r 147 (504)
-.+|.- +..+..+.|.++|..|+..|+. .||+|++=-.|| .+||+|..++..
T Consensus 135 ~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~~~p~v~Hg~t~ts 190 (599)
T PLN02952 135 YTGHNSYLTGNQLSSDCSEVPIVKALQRGVR--VIELDLWPGSTKDEILVLHGRTLTT 190 (599)
T ss_pred eccccccccCCccCCcCCHHHHHHHHHcCCc--EEEEEeecCCCCCCCEEEeCCcccc
Confidence 456764 3456778999999999999999 999999977665 489999987754
No 152
>PLN02222 phosphoinositide phospholipase C 2
Probab=79.76 E-value=2.1 Score=47.63 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=39.3
Q ss_pred eEeeCCC---CCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCe-EEEecCcCcc
Q 010671 409 LVISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGV-PFCLSFINLI 460 (504)
Q Consensus 409 ~iiaHRG---~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~-~v~~Hd~~l~ 460 (504)
+-.+|+- +.....+.|..+|.+|+..||.+||+|++=-.||. ++|+|-.++.
T Consensus 114 I~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~~~v~HG~tlt 169 (581)
T PLN02222 114 IFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLT 169 (581)
T ss_pred eecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCeEeeCCccc
Confidence 3455552 12345678899999999999999999999766665 5799987764
No 153
>PLN02223 phosphoinositide phospholipase C
Probab=78.60 E-value=2.1 Score=47.10 Aligned_cols=39 Identities=10% Similarity=-0.010 Sum_probs=33.2
Q ss_pred CchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 422 SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 422 enT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..|..+|.+|+..||.+||+|++-..++.+++.|-.++.
T Consensus 134 ~ss~e~y~~aL~~GcRcvElD~W~~~~~~~~v~hG~tlt 172 (537)
T PLN02223 134 LYSIEPIIDALEQGVRVVELDLLPDGKDGICVRPKWNFE 172 (537)
T ss_pred cccHHHHHHHHHcCCcEEEEEecCCCCCCCeEeeCCcee
Confidence 389999999999999999999996555567888987764
No 154
>PRK06852 aldolase; Validated
Probab=78.36 E-value=11 Score=38.65 Aligned_cols=183 Identities=14% Similarity=0.183 Sum_probs=90.4
Q ss_pred HHHHHHHhcCCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCc-cccHHHHHhhHHHHHhh-------hcccc
Q 010671 240 FVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTT-NQTYGSLLKNLTFIKTF-------ASGIL 311 (504)
Q Consensus 240 ~v~~~l~~~g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~-~~~y~~l~~~l~~i~~~-------a~gi~ 311 (504)
.+++.+.+.+..-+.. ....++...... + +.+++..+-....+.+.. ...+..+....++..++ |+++.
T Consensus 63 ~~i~~~~~~g~dav~~-~~G~l~~~~~~~-~-~~~lIlkl~~~t~l~~~~~~~p~~~l~~sVeeAvrlG~~~~~~AdAV~ 139 (304)
T PRK06852 63 HLFRIASKAKIGVFAT-QLGLIARYGMDY-P-DVPYLVKLNSKTNLVKTSQRDPLSRQLLDVEQVVEFKENSGLNILGVG 139 (304)
T ss_pred HHHHHHHhcCCCEEEe-CHHHHHhhcccc-C-CCcEEEEECCCCCcCCcccCCccccceecHHHHHhcCCccCCCceEEE
Confidence 3555566666652221 367776654443 2 567776654332222200 01111233334444433 33443
Q ss_pred cCCccccccCc--cccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCCh--HHH-HHHHhhcCCCcccccccCCC-
Q 010671 312 VPKDYIWPVDE--SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDP--LTE-YLSFIDNGDFSVDGVLSDFP- 385 (504)
Q Consensus 312 ~~~~~i~~~~~--~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~--~~e-~~~~i~~G~~gVDGIiTD~P- 385 (504)
.. +.+-+. ..-+..-..+++.||+.|+.+.+|..-.-.... -..|| .+- .+... ++|+|.|=|++|
T Consensus 140 v~---v~~Gs~~E~~ml~~l~~v~~ea~~~GlPll~~~yprG~~i~--~~~~~~~ia~aaRiaa---ELGADIVKv~y~~ 211 (304)
T PRK06852 140 YT---IYLGSEYESEMLSEAAQIIYEAHKHGLIAVLWIYPRGKAVK--DEKDPHLIAGAAGVAA---CLGADFVKVNYPK 211 (304)
T ss_pred EE---EecCCHHHHHHHHHHHHHHHHHHHhCCcEEEEeeccCcccC--CCccHHHHHHHHHHHH---HHcCCEEEecCCC
Confidence 31 111110 011112246889999999999999764321111 01132 111 23333 456999999999
Q ss_pred ----CChHHHHHHhhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHH-cCCCEEEe
Q 010671 386 ----LTPSAAVDCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAIS-DGVDFIDC 441 (504)
Q Consensus 386 ----~~~~~~l~~~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~-~g~~~iE~ 441 (504)
.....+.+..... .+.|++|| |++..-.+-.+.-.+.|++ .|+.++-+
T Consensus 212 ~~~~g~~e~f~~vv~~~------g~vpVvia--GG~k~~~~e~L~~v~~ai~~aGa~Gv~~ 264 (304)
T PRK06852 212 KEGANPAELFKEAVLAA------GRTKVVCA--GGSSTDPEEFLKQLYEQIHISGASGNAT 264 (304)
T ss_pred cCCCCCHHHHHHHHHhC------CCCcEEEe--CCCCCCHHHHHHHHHHHHHHcCCceeee
Confidence 4333333322211 12456664 5555444556777777888 89877654
No 155
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=78.33 E-value=3.2 Score=41.93 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=36.3
Q ss_pred CCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 421 penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..+...+|..++..|+.++|+||+-.+|+.++++|-..+.
T Consensus 33 ~~tq~~~~~~qL~~G~R~lDir~~~~~~~~~~v~HG~~~~ 72 (274)
T cd00137 33 GLTQTEMYRQQLLSGCRCVDIRCWDGKPEEPIIYHGPTFL 72 (274)
T ss_pred CcCcHHHHHHHHHcCCcEEEEEeecCCCCCeEEEECCccc
Confidence 5788999999999999999999999999999999987653
No 156
>PLN02222 phosphoinositide phospholipase C 2
Probab=76.92 E-value=2.8 Score=46.72 Aligned_cols=52 Identities=12% Similarity=0.083 Sum_probs=41.6
Q ss_pred EEEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCe-EEEecCCcCcc
Q 010671 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEA-GICFPDLKLDN 147 (504)
Q Consensus 94 viaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~-~Vv~HD~~l~r 147 (504)
-.+|.- +..+..+.|.++|..|+..|+. .||+|++=-.||. ++|+|..+|..
T Consensus 115 ~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~~~~~v~HG~tlt~ 170 (581)
T PLN02222 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVR--VIELDIWPNSDKDDIDVLHGMTLTT 170 (581)
T ss_pred ecccCccccCCcccCccCHHHHHHHHHcCCc--EEEEEeccCCCCCCCeEeeCCcccC
Confidence 456764 2456678999999999999999 9999999766665 57999987754
No 157
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=76.36 E-value=3.9 Score=36.93 Aligned_cols=41 Identities=15% Similarity=0.268 Sum_probs=33.0
Q ss_pred CCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010671 420 YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 420 ~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
...+...++...++.|+.++|++|+...++.++++|.....
T Consensus 24 ~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~~~~~v~Hg~~~~ 64 (146)
T PF00388_consen 24 WSKTQSWSIREQLESGIRYLDLRVWDGNDGELVVYHGITST 64 (146)
T ss_dssp HC-B-SHHHHHHHHTT--EEEEEEEEETTSSEEEEETTSEE
T ss_pred ccCcchHhHHHHHhccCceEEEEEEcCCCCceEEEeCCEee
Confidence 35688889999999999999999999999999999977654
No 158
>PRK08227 autoinducer 2 aldolase; Validated
Probab=74.28 E-value=15 Score=36.98 Aligned_cols=91 Identities=11% Similarity=-0.022 Sum_probs=57.2
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHH----HHHHhhcCCCcccccccCCCC-ChHHHHHHhhhcCCCccc
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE----YLSFIDNGDFSVDGVLSDFPL-TPSAAVDCFAHLGKNASK 404 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e----~~~~i~~G~~gVDGIiTD~P~-~~~~~l~~~~~~~~~~~~ 404 (504)
..++++||+.|+.+.+|.-..+.. .|+.+. .+... ++|+|.|=|+||. .+.++.+ .
T Consensus 130 ~~v~~ea~~~G~Plla~~prG~~~------~~~~~~ia~aaRiaa---ELGADiVK~~y~~~~f~~vv~---a------- 190 (264)
T PRK08227 130 IQLVDAGLRYGMPVMAVTAVGKDM------VRDARYFSLATRIAA---EMGAQIIKTYYVEEGFERITA---G------- 190 (264)
T ss_pred HHHHHHHHHhCCcEEEEecCCCCc------CchHHHHHHHHHHHH---HHcCCEEecCCCHHHHHHHHH---c-------
Confidence 568899999999999987543310 122111 22223 4569999999996 2222221 1
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010671 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
-+.|++|| |++..-.+-.+.-.+.|++.||.++-+
T Consensus 191 ~~vPVvia--GG~k~~~~~~L~~v~~ai~aGa~Gv~~ 225 (264)
T PRK08227 191 CPVPIVIA--GGKKLPERDALEMCYQAIDEGASGVDM 225 (264)
T ss_pred CCCcEEEe--CCCCCCHHHHHHHHHHHHHcCCceeee
Confidence 13466664 555544456777778899999988755
No 159
>PLN02223 phosphoinositide phospholipase C
Probab=74.22 E-value=3.6 Score=45.29 Aligned_cols=51 Identities=10% Similarity=0.075 Sum_probs=38.9
Q ss_pred EEEeCCC---CCCCCc-hHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc
Q 010671 94 VVARGGF---SGIFPD-SSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (504)
Q Consensus 94 viaHRG~---~~~~pE-nT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~ 146 (504)
-.+|.-+ ..+.-+ .|.++|..|+..|+. .||+|++--.++.++|.|..++.
T Consensus 118 ~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcR--cvElD~W~~~~~~~~v~hG~tlt 172 (537)
T PLN02223 118 HTSLKSYFTGNNVFGKLYSIEPIIDALEQGVR--VVELDLLPDGKDGICVRPKWNFE 172 (537)
T ss_pred eccccccccCCcccCCcccHHHHHHHHHcCCc--EEEEEecCCCCCCCeEeeCCcee
Confidence 3456552 223455 899999999999999 99999996455567899988763
No 160
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=74.20 E-value=5 Score=40.55 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=36.0
Q ss_pred CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcC
Q 010671 104 FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (504)
Q Consensus 104 ~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l 145 (504)
+..+...+|..++..|+. ++|+||+-.+|+.++|+|...+
T Consensus 32 ~~~tq~~~~~~qL~~G~R--~lDir~~~~~~~~~~v~HG~~~ 71 (274)
T cd00137 32 WGLTQTEMYRQQLLSGCR--CVDIRCWDGKPEEPIIYHGPTF 71 (274)
T ss_pred cCcCcHHHHHHHHHcCCc--EEEEEeecCCCCCeEEEECCcc
Confidence 357889999999999999 9999999999999999997543
No 161
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=66.87 E-value=37 Score=33.04 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=54.9
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHH-HHHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccce
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e-~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (504)
..+++.+|+.|+++.++......-..-..+.+-... .+.+.+.| +|.|-|.+|.-. +.++.+.+. .+.|
T Consensus 112 ~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~G---aD~Ik~~~~~~~-~~~~~i~~~------~~~p 181 (235)
T cd00958 112 ARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELG---ADIVKTKYTGDA-ESFKEVVEG------CPVP 181 (235)
T ss_pred HHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHC---CCEEEecCCCCH-HHHHHHHhc------CCCC
Confidence 457778899999999976442100000000011122 33355554 999999877532 233333221 1234
Q ss_pred eEeeCCCC-CCCCCCchHHHHHHHHHcCCCEEEe
Q 010671 409 LVISKNGA-SGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 409 ~iiaHRG~-~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
++++ |+ ...-++-++.-...+++.||+++-+
T Consensus 182 vv~~--GG~~~~~~~~~l~~~~~~~~~Ga~gv~v 213 (235)
T cd00958 182 VVIA--GGPKKDSEEEFLKMVYDAMEAGAAGVAV 213 (235)
T ss_pred EEEe--CCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 4444 43 3345566667788899999987643
No 162
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=66.39 E-value=10 Score=39.23 Aligned_cols=41 Identities=12% Similarity=0.038 Sum_probs=33.6
Q ss_pred CCchHHHHHHHHHcCCCEEEeeeeeecC--------------------CeEEEecCcCccc
Q 010671 421 PSCTNLAYQKAISDGVDFIDCPVQMSKD--------------------GVPFCLSFINLIN 461 (504)
Q Consensus 421 penT~~a~~~a~~~g~~~iE~Dv~~t~D--------------------g~~v~~Hd~~l~r 461 (504)
.+|+...+..+++.|+..+|+||+-..+ +-+-|+|..+++.
T Consensus 43 ~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~~~~~~~~~~g~~V~H~~~~d~ 103 (324)
T cd08589 43 LDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAPDDAAVMKKPGWKVSHIPDLDN 103 (324)
T ss_pred ccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccccccccccCCCeEEEcCCCcCC
Confidence 3578889999999999999999998654 5577889888754
No 163
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=65.09 E-value=11 Score=33.95 Aligned_cols=39 Identities=13% Similarity=0.069 Sum_probs=31.4
Q ss_pred CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCc
Q 010671 104 FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLK 144 (504)
Q Consensus 104 ~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~ 144 (504)
+..+.-.++..+++.|+. ++++||+..+++.++++|...
T Consensus 24 ~~~~Q~~~i~~QL~~GiR--~lDlrv~~~~~~~~~v~Hg~~ 62 (146)
T PF00388_consen 24 WSKTQSWSIREQLESGIR--YLDLRVWDGNDGELVVYHGIT 62 (146)
T ss_dssp HC-B-SHHHHHHHHTT----EEEEEEEEETTSSEEEEETTS
T ss_pred ccCcchHhHHHHHhccCc--eEEEEEEcCCCCceEEEeCCE
Confidence 356777899999999999 999999999999999999654
No 164
>PRK09250 fructose-bisphosphate aldolase; Provisional
Probab=64.54 E-value=33 Score=35.85 Aligned_cols=191 Identities=12% Similarity=0.048 Sum_probs=94.8
Q ss_pred HHHHHHHHhcCCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCcc-CCCccccHHHHHhhHHHHHhh-hcccccCCcc
Q 010671 239 SFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEI-EPTTNQTYGSLLKNLTFIKTF-ASGILVPKDY 316 (504)
Q Consensus 239 ~~v~~~l~~~g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~-~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~ 316 (504)
+.+++.+.+.|..-+.. ....++........ +.+++..+-....+ .+. .....+....++..+. |++++..
T Consensus 94 ~~~i~~a~~~g~dAv~~-~~G~l~~~~~~~~~-~iplIlkln~~t~l~~~~--~~~~~l~~sVedAlrLGAdAV~~t--- 166 (348)
T PRK09250 94 ENIVKLAIEAGCNAVAS-TLGVLEAVARKYAH-KIPFILKLNHNELLSYPN--TYDQALTASVEDALRLGAVAVGAT--- 166 (348)
T ss_pred HHHHHHHHhcCCCEEEe-CHHHHHhccccccC-CCCEEEEeCCCCCCCCCC--CCcccceecHHHHHHCCCCEEEEE---
Confidence 34566666667653322 36777764333312 56777665433222 111 1122222345554443 5555542
Q ss_pred ccccCcc--ccCCCCHHHHHHHHHcCCeEEEecCCCC--CCccccCCCChH--HH-HHHHhhcCCCcccccccCCCCChH
Q 010671 317 IWPVDES--LYLLPHTTIVLDAHKERLEVFASNFAND--IPISFNYSYDPL--TE-YLSFIDNGDFSVDGVLSDFPLTPS 389 (504)
Q Consensus 317 i~~~~~~--~~l~~~~~lV~~ahk~Gl~V~~wTv~n~--~~~~~~y~~D~~--~e-~~~~i~~G~~gVDGIiTD~P~~~~ 389 (504)
+.+-+.. .-+..-..+++.||+.|+.+.+|..-.- .....+|..+|. +- .+... ++|+|.|=|.+|....
T Consensus 167 vy~Gs~~E~~ml~~l~~i~~ea~~~GlPlv~~~YpRG~~i~~~~d~~~~~d~Ia~AaRiaa---ELGADIVKv~yp~~~~ 243 (348)
T PRK09250 167 IYFGSEESRRQIEEISEAFEEAHELGLATVLWSYLRNSAFKKDGDYHTAADLTGQANHLAA---TIGADIIKQKLPTNNG 243 (348)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecccCcccCCcccccccHHHHHHHHHHHH---HHcCCEEEecCCCChh
Confidence 2221110 0111225688999999999999976432 112223332331 11 22223 4569999999997544
Q ss_pred HHHHH---------------------hhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHH---HHcCCCEEEe
Q 010671 390 AAVDC---------------------FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKA---ISDGVDFIDC 441 (504)
Q Consensus 390 ~~l~~---------------------~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a---~~~g~~~iE~ 441 (504)
.+.+- ++..-.+.-..+.|++++ |++..-.+..+...+.| ++.|+.++-+
T Consensus 244 ~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~V~ac~ag~vpVviA--GG~k~~~~e~L~~v~~a~~~i~aGa~Gv~i 317 (348)
T PRK09250 244 GYKAINFGKTDDRVYSKLTSDHPIDLVRYQVANCYMGRRGLINS--GGASKGEDDLLDAVRTAVINKRAGGMGLII 317 (348)
T ss_pred hHHHhhcccccccccccccccchHHHHHHHHHhhccCCceEEEe--CCCCCCHHHHHHHHHHHHHhhhcCCcchhh
Confidence 32221 000000000113466664 55544455677777888 8889877643
No 165
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=54.28 E-value=19 Score=33.97 Aligned_cols=57 Identities=21% Similarity=0.151 Sum_probs=36.0
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010671 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
-+++|+.+|++|..|++.. |. --..+.|+ .-++.+.+.+ .+|||||=.|.....+.+
T Consensus 33 l~~~v~~~~~~gK~vfVHi---Dl--i~Gl~~D~-~~i~~L~~~~--~~dGIISTk~~~i~~Ak~ 89 (175)
T PF04309_consen 33 LKDIVKRLKAAGKKVFVHI---DL--IEGLSRDE-AGIEYLKEYG--KPDGIISTKSNLIKRAKK 89 (175)
T ss_dssp HHHHHHHHHHTT-EEEEEC---CG--EETB-SSH-HHHHHHHHTT----SEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEe---hh--cCCCCCCH-HHHHHHHHcC--CCcEEEeCCHHHHHHHHH
Confidence 4789999999999999974 11 11122343 3344444433 599999999988877764
No 166
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=51.68 E-value=18 Score=35.94 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=33.7
Q ss_pred CchHHHHHHHHHcCCCEEEeeeeeec------CCeEEEecCcCc
Q 010671 422 SCTNLAYQKAISDGVDFIDCPVQMSK------DGVPFCLSFINL 459 (504)
Q Consensus 422 enT~~a~~~a~~~g~~~iE~Dv~~t~------Dg~~v~~Hd~~l 459 (504)
-|+.+.++.|++..+.+||.||.+-+ +++||+.|.+..
T Consensus 11 vNsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~ 54 (244)
T PF10223_consen 11 VNSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPAT 54 (244)
T ss_pred cCCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCC
Confidence 58999999999999999999999984 889999997644
No 167
>PLN02746 hydroxymethylglutaryl-CoA lyase
Probab=48.54 E-value=80 Score=33.14 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=57.3
Q ss_pred HHHHHHHHHcCCeEE---EecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhh
Q 010671 330 TTIVLDAHKERLEVF---ASNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~---~wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~ 397 (504)
.+.|+.++++|++|. ..+|..+. ....|| .+-++.+.+.| +|.| +.| .|.++.++++.+..
T Consensus 165 ~~~v~~Ak~~Gl~v~~~is~~fg~p~----~~r~~~~~l~~~~~~~~~~G---ad~I~l~DT~G~a~P~~v~~lv~~l~~ 237 (347)
T PLN02746 165 REVALAAKKHSIPVRGYVSCVVGCPI----EGPVPPSKVAYVAKELYDMG---CYEISLGDTIGVGTPGTVVPMLEAVMA 237 (347)
T ss_pred HHHHHHHHHcCCeEEEEEEeeecCCc----cCCCCHHHHHHHHHHHHHcC---CCEEEecCCcCCcCHHHHHHHHHHHHH
Confidence 468999999999984 33343331 111233 22345566555 8865 445 46666666666643
Q ss_pred cCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 398 LGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 398 ~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
..+ ....-+-.|.- .|.+..|++ .|++.||+.+++-|.
T Consensus 238 ~~~----~~~i~~H~Hnd-~GlA~AN~l----AA~~aGa~~vd~sv~ 275 (347)
T PLN02746 238 VVP----VDKLAVHFHDT-YGQALANIL----VSLQMGISTVDSSVA 275 (347)
T ss_pred hCC----CCeEEEEECCC-CChHHHHHH----HHHHhCCCEEEEecc
Confidence 211 11122445543 467777877 556789999887765
No 168
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=47.31 E-value=2.5e+02 Score=31.05 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=55.5
Q ss_pred HHHHHHHHHcCCeE---EEecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhh
Q 010671 330 TTIVLDAHKERLEV---FASNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V---~~wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~ 397 (504)
...++.++++|..+ .++|+.... ++ .+-..++.+.| +|.| |.| .|..+.+.++.+..
T Consensus 127 ~~ai~~vk~ag~~~~~~i~yt~sp~~--------t~e~~~~~a~~l~~~G---ad~I~IkDtaGll~P~~~~~LV~~Lk~ 195 (499)
T PRK12330 127 EHAMKAVKKVGKHAQGTICYTVSPIH--------TVEGFVEQAKRLLDMG---ADSICIKDMAALLKPQPAYDIVKGIKE 195 (499)
T ss_pred HHHHHHHHHhCCeEEEEEEEecCCCC--------CHHHHHHHHHHHHHcC---CCEEEeCCCccCCCHHHHHHHHHHHHH
Confidence 55788999999876 355664321 22 12234555555 8876 445 46666666666654
Q ss_pred cCCCcccccce-eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 398 LGKNASKSANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 398 ~~~~~~~~~~~-~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
.-+ ..-| -+-.|-- .+...+.+.+|++.|||.|++-|.
T Consensus 196 ~~~----~~ipI~~H~Hnt-----~GlA~An~laAieAGad~vDtai~ 234 (499)
T PRK12330 196 ACG----EDTRINLHCHST-----TGVTLVSLMKAIEAGVDVVDTAIS 234 (499)
T ss_pred hCC----CCCeEEEEeCCC-----CCcHHHHHHHHHHcCCCEEEeecc
Confidence 211 0122 2444532 344455555788999999988775
No 169
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=46.28 E-value=15 Score=37.86 Aligned_cols=18 Identities=39% Similarity=0.392 Sum_probs=16.8
Q ss_pred HHHHHHHHHcCCeEEEec
Q 010671 330 TTIVLDAHKERLEVFASN 347 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wT 347 (504)
.-+|+.||++||+||+|.
T Consensus 73 ~~~I~eaHkrGlevHAW~ 90 (311)
T PF02638_consen 73 EFMIEEAHKRGLEVHAWF 90 (311)
T ss_pred HHHHHHHHHcCCEEEEEE
Confidence 569999999999999997
No 170
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=46.09 E-value=46 Score=30.74 Aligned_cols=67 Identities=21% Similarity=0.103 Sum_probs=42.3
Q ss_pred HHHHHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccceeEeeCCCCCCC--CCCchHHHHHHHHHcCCCEEEe
Q 010671 364 TEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLLVISKNGASGD--YPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 364 ~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~~iiaHRG~~~~--~penT~~a~~~a~~~g~~~iE~ 441 (504)
....++++.| ||||+..- +.++...+.- ...+..++++-|+... ..+.++...+.|.+.|||++.+
T Consensus 17 ~~~~~~~~~g---v~gi~~~g-----~~i~~~~~~~----~~~~~~v~~~v~~~~~~~~~~~~~~~a~~a~~~Gad~i~v 84 (201)
T cd00945 17 KLCDEAIEYG---FAAVCVNP-----GYVRLAADAL----AGSDVPVIVVVGFPTGLTTTEVKVAEVEEAIDLGADEIDV 84 (201)
T ss_pred HHHHHHHHhC---CcEEEECH-----HHHHHHHHHh----CCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 3455566655 99998885 3333332210 1103346666665442 2678888889999999999997
Q ss_pred e
Q 010671 442 P 442 (504)
Q Consensus 442 D 442 (504)
-
T Consensus 85 ~ 85 (201)
T cd00945 85 V 85 (201)
T ss_pred e
Confidence 4
No 171
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=45.37 E-value=24 Score=40.86 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=34.9
Q ss_pred CchHHHHHHHHHcCCCEEEeeee--eecCCeEEEecCcCcc
Q 010671 422 SCTNLAYQKAISDGVDFIDCPVQ--MSKDGVPFCLSFINLI 460 (504)
Q Consensus 422 enT~~a~~~a~~~g~~~iE~Dv~--~t~Dg~~v~~Hd~~l~ 460 (504)
-.+.+-|++++-.||.+||+|++ -++|+.||+.|-.+.-
T Consensus 341 ~sSvEmYRQvLLsGcRCVELDcWdgk~~d~EPvITHG~tm~ 381 (1189)
T KOG1265|consen 341 KSSVEMYRQVLLSGCRCVELDCWDGKGEDEEPVITHGFTMT 381 (1189)
T ss_pred cchHHHHHHHHHhcCceEEeeeecCCCCCCCceeecccchh
Confidence 34889999999999999999999 7789999999998763
No 172
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=43.75 E-value=2.8e+02 Score=30.38 Aligned_cols=158 Identities=20% Similarity=0.267 Sum_probs=79.0
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHH-HHhhHHHHHh-hhcccccCCccccccCccccCCCCHHHHH
Q 010671 257 EVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS-LLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVL 334 (504)
Q Consensus 257 d~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~-l~~~l~~i~~-~a~gi~~~~~~i~~~~~~~~l~~~~~lV~ 334 (504)
+++-|+.+++.. | ++++..++-+.+.+.. ..|.+ ... .+++. ...|+.+.. +. +.-++...-...++
T Consensus 71 pwerlr~~r~~~-~-nt~lqmLlRG~n~vgy---~~ypddvv~--~fv~~a~~~Gidi~R--if--d~lnd~~n~~~ai~ 139 (468)
T PRK12581 71 PWERLRTLKKGL-P-NTRLQMLLRGQNLLGY---RHYADDIVD--KFISLSAQNGIDVFR--IF--DALNDPRNIQQALR 139 (468)
T ss_pred HHHHHHHHHHhC-C-CCceeeeeccccccCc---cCCcchHHH--HHHHHHHHCCCCEEE--Ec--ccCCCHHHHHHHHH
Confidence 578899999987 4 6777653333221211 12221 111 11222 123343321 11 11011122356889
Q ss_pred HHHHcCCeEE---EecCCCCCCccccCCCChHHHHHHHhhcCCCcccccc-cC-----CCCChHHHHHHhhhcCCCcccc
Q 010671 335 DAHKERLEVF---ASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAHLGKNASKS 405 (504)
Q Consensus 335 ~ahk~Gl~V~---~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~~~~~~~~~ 405 (504)
.+++.|..+. ++|....... +|. .+....+.+.| +|.|. .| .|..+.+.++.+.+. .
T Consensus 140 ~ak~~G~~~~~~i~yt~sp~~t~--~y~---~~~a~~l~~~G---ad~I~IkDtaG~l~P~~v~~Lv~alk~~-~----- 205 (468)
T PRK12581 140 AVKKTGKEAQLCIAYTTSPVHTL--NYY---LSLVKELVEMG---ADSICIKDMAGILTPKAAKELVSGIKAM-T----- 205 (468)
T ss_pred HHHHcCCEEEEEEEEEeCCcCcH--HHH---HHHHHHHHHcC---CCEEEECCCCCCcCHHHHHHHHHHHHhc-c-----
Confidence 9999999864 4444221100 110 12344555554 88764 45 466666666666431 1
Q ss_pred cce-eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 406 ANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 406 ~~~-~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
..| -+-+|- -.+...+.+.+|++.||+.|++-+.
T Consensus 206 ~~pi~~H~Hn-----t~GlA~An~laAieAGad~vD~ai~ 240 (468)
T PRK12581 206 NLPLIVHTHA-----TSGISQMTYLAAVEAGADRIDTALS 240 (468)
T ss_pred CCeEEEEeCC-----CCccHHHHHHHHHHcCCCEEEeecc
Confidence 122 234443 3344555555788999999988876
No 173
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=43.67 E-value=2.1e+02 Score=30.06 Aligned_cols=31 Identities=16% Similarity=0.065 Sum_probs=23.9
Q ss_pred CCCchHHHHHHHHHcCCCEEEeeeeeecCCe
Q 010671 420 YPSCTNLAYQKAISDGVDFIDCPVQMSKDGV 450 (504)
Q Consensus 420 ~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~ 450 (504)
+-+.+...-.+|+..|||++-+-+|.|.|..
T Consensus 284 ~sd~~~~~a~AAva~GAdGliIE~H~~pd~A 314 (352)
T PRK13396 284 KSEYVPSMAMAAIAAGTDSLMIEVHPNPAKA 314 (352)
T ss_pred cHHHHHHHHHHHHhhCCCeEEEEecCCcccC
Confidence 3455667888999999998877788777655
No 174
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=43.66 E-value=90 Score=31.13 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=52.6
Q ss_pred HHHHHHHHHc---CCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCccccccc-------CCCCChHHHHHHhhhcC
Q 010671 330 TTIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS-------DFPLTPSAAVDCFAHLG 399 (504)
Q Consensus 330 ~~lV~~ahk~---Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiT-------D~P~~~~~~l~~~~~~~ 399 (504)
...++.+++. |+.|++++.++ ..+.+++.+.| ++.|.. +..-.-.++++.+.+.
T Consensus 110 ~~tv~aa~~L~~~Gf~vlpyc~dd------------~~~ar~l~~~G---~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~- 173 (248)
T cd04728 110 IETLKAAEILVKEGFTVLPYCTDD------------PVLAKRLEDAG---CAAVMPLGSPIGSGQGLLNPYNLRIIIER- 173 (248)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHcC---CCEeCCCCcCCCCCCCCCCHHHHHHHHHh-
Confidence 4688888888 99999999854 25567777654 998854 0000012333333221
Q ss_pred CCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeec
Q 010671 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK 447 (504)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~ 447 (504)
..-|+|+. -| =+|-+-..+|++.|||++-+---+++
T Consensus 174 -----~~vpVI~e-gG------I~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 174 -----ADVPVIVD-AG------IGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred -----CCCcEEEe-CC------CCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 12344443 22 13344556788899988877555553
No 175
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=40.70 E-value=1.5e+02 Score=31.91 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=55.9
Q ss_pred HHHHHHHHHcCCeEE---EecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccC------CCCChHHHHHHhhhcCC
Q 010671 330 TTIVLDAHKERLEVF---ASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD------FPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~---~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD------~P~~~~~~l~~~~~~~~ 400 (504)
..-++.+++.|..+. +||...-.. ..|. .+-.+++.++| ||.|+-- .|..+-+.++++.+.-
T Consensus 128 ~~ai~a~kk~G~h~q~~i~YT~sPvHt--~e~y---v~~akel~~~g---~DSIciKDmaGlltP~~ayelVk~iK~~~- 198 (472)
T COG5016 128 KTAIKAAKKHGAHVQGTISYTTSPVHT--LEYY---VELAKELLEMG---VDSICIKDMAGLLTPYEAYELVKAIKKEL- 198 (472)
T ss_pred HHHHHHHHhcCceeEEEEEeccCCccc--HHHH---HHHHHHHHHcC---CCEEEeecccccCChHHHHHHHHHHHHhc-
Confidence 457888999998764 455532111 1111 12234555554 9988643 3666667776665431
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+-| |.-|-=+ --.=+..+|.+|++.|+|+|++-+.
T Consensus 199 -----~~p-v~lHtH~---TsG~a~m~ylkAvEAGvD~iDTAis 233 (472)
T COG5016 199 -----PVP-VELHTHA---TSGMAEMTYLKAVEAGVDGIDTAIS 233 (472)
T ss_pred -----CCe-eEEeccc---ccchHHHHHHHHHHhCcchhhhhhc
Confidence 122 2333211 1233567899999999999877654
No 176
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=40.45 E-value=73 Score=31.22 Aligned_cols=100 Identities=17% Similarity=0.058 Sum_probs=55.2
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHH-HHHHhhcCCCccccccc------CCCCChHHHHHHhhhcCCCc
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVLS------DFPLTPSAAVDCFAHLGKNA 402 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e-~~~~i~~G~~gVDGIiT------D~P~~~~~~l~~~~~~~~~~ 402 (504)
...++.+++.|++|.+....-... . +..+...+ ++.+.+. |+|.|.- -.|....++++.+.+..++
T Consensus 118 ~~~i~~a~~~G~~v~~~~~~~~~~-~--~~~~~l~~~~~~~~~~---g~~~i~l~Dt~G~~~P~~v~~li~~l~~~~~~- 190 (265)
T cd03174 118 EEAIEAAKEAGLEVEGSLEDAFGC-K--TDPEYVLEVAKALEEA---GADEISLKDTVGLATPEEVAELVKALREALPD- 190 (265)
T ss_pred HHHHHHHHHCCCeEEEEEEeecCC-C--CCHHHHHHHHHHHHHc---CCCEEEechhcCCcCHHHHHHHHHHHHHhCCC-
Confidence 457889999999987776321100 0 11112233 3444444 4876542 3466666666655543221
Q ss_pred ccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
...-+-+|.- .|.+..|++ .|++.||++|++-+.
T Consensus 191 ---~~~~~H~Hn~-~gla~an~l----aA~~aG~~~id~s~~ 224 (265)
T cd03174 191 ---VPLGLHTHNT-LGLAVANSL----AALEAGADRVDGSVN 224 (265)
T ss_pred ---CeEEEEeCCC-CChHHHHHH----HHHHcCCCEEEeccc
Confidence 1222445543 366677777 456789999877665
No 177
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=39.16 E-value=44 Score=35.02 Aligned_cols=104 Identities=14% Similarity=0.035 Sum_probs=60.8
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh-HHHHHHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccce
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP-LTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~-~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (504)
.+.|+.||++|.++++=. |.-. .+-.... ...+..+++.| ||+||--.|..+.-+.+.. |+.+-+..+
T Consensus 52 ~e~i~~ah~~gkk~~V~~-N~~~---~~~~~~~~~~~l~~l~e~G---vDaviv~Dpg~i~l~~e~~----p~l~ih~S~ 120 (347)
T COG0826 52 AEAVELAHSAGKKVYVAV-NTLL---HNDELETLERYLDRLVELG---VDAVIVADPGLIMLARERG----PDLPIHVST 120 (347)
T ss_pred HHHHHHHHHcCCeEEEEe-cccc---ccchhhHHHHHHHHHHHcC---CCEEEEcCHHHHHHHHHhC----CCCcEEEee
Confidence 579999999999987753 2210 0000011 23345566555 9999999998766555433 122222222
Q ss_pred eE----------eeCCCCC--CCCCCchHHHHHHHHHcCCCEEEeeeee
Q 010671 409 LV----------ISKNGAS--GDYPSCTNLAYQKAISDGVDFIDCPVQM 445 (504)
Q Consensus 409 ~i----------iaHRG~~--~~~penT~~a~~~a~~~g~~~iE~Dv~~ 445 (504)
.. ..-+|+. =...|+|+.-+.+..+.-.+ +|+-|..
T Consensus 121 q~~v~N~~~~~f~~~~G~~rvVl~rEls~~ei~~i~~~~~~-veiEvfV 168 (347)
T COG0826 121 QANVTNAETAKFWKELGAKRVVLPRELSLEEIKEIKEQTPD-VEIEVFV 168 (347)
T ss_pred eEecCCHHHHHHHHHcCCEEEEeCccCCHHHHHHHHHhCCC-ceEEEEE
Confidence 22 2233433 25789999999888886543 6666654
No 178
>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses. The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument
Probab=38.84 E-value=45 Score=25.73 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=15.4
Q ss_pred eccccchhhhhhhcCCcccchh
Q 010671 24 SKEEKSRTFIKRIGGAPAELNL 45 (504)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~ 45 (504)
|-.|.-.-|++|+|.++...++
T Consensus 6 SDnETA~~FL~RvGr~q~~~r~ 27 (60)
T PF06072_consen 6 SDNETATEFLRRVGRQQHASRR 27 (60)
T ss_pred cccccHHHHHHHHhHHHHHHHH
Confidence 3456667899999998844433
No 179
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain. Citramalate synthase (CMS) catalyzes the conversion of pyruvate and acetyl-CoA to (R)-citramalate in the first dedicated step of the citramalate pathway. Citramalate is only found in Leptospira interrogans and a few other microorganisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center con
Probab=38.70 E-value=91 Score=31.57 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh--HHH-HHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP--LTE-YLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~--~~e-~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~~ 400 (504)
.+.++.+++.|++|.+..-. ..-.| ..+| ..+ +..+.+. |+|.| +.| .|..+.++++.+.+..+
T Consensus 118 ~~~i~~a~~~G~~v~~~~~d--~~~~~--r~~~~~~~~~~~~~~~~---G~~~i~l~DT~G~~~P~~v~~l~~~l~~~~~ 190 (280)
T cd07945 118 REVIEYAIKNGIEVNIYLED--WSNGM--RDSPDYVFQLVDFLSDL---PIKRIMLPDTLGILSPFETYTYISDMVKRYP 190 (280)
T ss_pred HHHHHHHHhCCCEEEEEEEe--CCCCC--cCCHHHHHHHHHHHHHc---CCCEEEecCCCCCCCHHHHHHHHHHHHhhCC
Confidence 45799999999987665431 11111 2233 222 3344444 48865 345 46666666665543211
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
....-+-.|.- .|.+..|++ .|++.||++|+.-+.
T Consensus 191 ----~~~i~~H~Hnd-~Gla~AN~l----aA~~aGa~~vd~s~~ 225 (280)
T cd07945 191 ----NLHFDFHAHND-YDLAVANVL----AAVKAGIKGLHTTVN 225 (280)
T ss_pred ----CCeEEEEeCCC-CCHHHHHHH----HHHHhCCCEEEEecc
Confidence 11223556653 366777777 557889998877665
No 180
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=37.09 E-value=1.9e+02 Score=29.70 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=52.9
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCC--------CChHHHHHHhhhcCC
Q 010671 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP--------LTPSAAVDCFAHLGK 400 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P--------~~~~~~l~~~~~~~~ 400 (504)
+..+++++|+.|..|++ ++.+ .++..++.+.| +|+|+..-. ......+..+.+.
T Consensus 98 p~~~i~~lk~~g~~v~~-~v~s------------~~~a~~a~~~G---aD~Ivv~g~eagGh~g~~~~~~ll~~v~~~-- 159 (307)
T TIGR03151 98 PGKYIPRLKENGVKVIP-VVAS------------VALAKRMEKAG---ADAVIAEGMESGGHIGELTTMALVPQVVDA-- 159 (307)
T ss_pred cHHHHHHHHHcCCEEEE-EcCC------------HHHHHHHHHcC---CCEEEEECcccCCCCCCCcHHHHHHHHHHH--
Confidence 35699999999999885 4432 25667777655 999986321 1123334443321
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
-..| ||+--|- ++-..+.+|+..||++|-+.-+
T Consensus 160 ----~~iP-viaaGGI------~~~~~~~~al~~GA~gV~iGt~ 192 (307)
T TIGR03151 160 ----VSIP-VIAAGGI------ADGRGMAAAFALGAEAVQMGTR 192 (307)
T ss_pred ----hCCC-EEEECCC------CCHHHHHHHHHcCCCEeecchH
Confidence 1134 5665553 2345567777889998877654
No 181
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=36.73 E-value=4.2e+02 Score=26.69 Aligned_cols=29 Identities=10% Similarity=0.041 Sum_probs=20.1
Q ss_pred CCchHHHHHHHHHcCCCEEEeeeeeecCC
Q 010671 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDG 449 (504)
Q Consensus 421 penT~~a~~~a~~~g~~~iE~Dv~~t~Dg 449 (504)
.|=-..--++|+..|+|++-+.||..+|.
T Consensus 200 r~~v~~la~AAvA~GaDGl~iEvHpdP~~ 228 (258)
T TIGR01362 200 REFVPTLARAAVAVGIDGLFMETHPDPKN 228 (258)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCCccc
Confidence 34344444678899999999988865543
No 182
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=35.36 E-value=1.8e+02 Score=29.60 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCeEE---EecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhh
Q 010671 330 TTIVLDAHKERLEVF---ASNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~---~wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~ 397 (504)
.+.|+.|+++|+.|. ..++..+. ....++ .+-++.+.+.| +|.| +.| .|..+.+.++.+.+
T Consensus 123 ~~~v~~ak~~g~~v~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~G---~d~i~l~DT~G~~~P~~v~~lv~~l~~ 195 (287)
T PRK05692 123 EPVAEAAKQAGVRVRGYVSCVLGCPY----EGEVPPEAVADVAERLFALG---CYEISLGDTIGVGTPGQVRAVLEAVLA 195 (287)
T ss_pred HHHHHHHHHcCCEEEEEEEEEecCCC----CCCCCHHHHHHHHHHHHHcC---CcEEEeccccCccCHHHHHHHHHHHHH
Confidence 468999999999984 23333221 111122 22344555544 8875 345 56666677666654
Q ss_pred cCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 398 LGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 398 ~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
..+. ...-+-.|.- .|.+..|++ .|++.|+++|+..+.
T Consensus 196 ~~~~----~~i~~H~Hn~-~Gla~AN~l----aA~~aG~~~id~s~~ 233 (287)
T PRK05692 196 EFPA----ERLAGHFHDT-YGQALANIY----ASLEEGITVFDASVG 233 (287)
T ss_pred hCCC----CeEEEEecCC-CCcHHHHHH----HHHHhCCCEEEEEcc
Confidence 2111 1223445542 466777776 566889999887665
No 183
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=34.28 E-value=1.4e+02 Score=30.15 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=55.5
Q ss_pred HHHHHHHHHcCCeEEE---ecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhh
Q 010671 330 TTIVLDAHKERLEVFA---SNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~---wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~ 397 (504)
...++.+++.|+.|.+ +++..+... ..++ .+-+..+.+. |+|.| +.| .|..+.+.++.+.+
T Consensus 117 ~~~v~~ak~~G~~v~~~i~~~f~~~~~~----~~~~~~~~~~~~~~~~~---Ga~~i~l~DT~G~~~P~~v~~lv~~l~~ 189 (274)
T cd07938 117 EPVAELAKAAGLRVRGYVSTAFGCPYEG----EVPPERVAEVAERLLDL---GCDEISLGDTIGVATPAQVRRLLEAVLE 189 (274)
T ss_pred HHHHHHHHHCCCeEEEEEEeEecCCCCC----CCCHHHHHHHHHHHHHc---CCCEEEECCCCCccCHHHHHHHHHHHHH
Confidence 4579999999999853 233222100 0122 1223444544 48765 344 46666666666654
Q ss_pred cCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 398 LGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 398 ~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
..++ ...-+-+|.- .|.+..|++ .|++.||++|++-+.
T Consensus 190 ~~~~----~~i~~H~Hnd-~GlA~AN~l----aA~~aGa~~id~t~~ 227 (274)
T cd07938 190 RFPD----EKLALHFHDT-RGQALANIL----AALEAGVRRFDSSVG 227 (274)
T ss_pred HCCC----CeEEEEECCC-CChHHHHHH----HHHHhCCCEEEEecc
Confidence 2111 1223455653 466777777 567789999887665
No 184
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=32.83 E-value=49 Score=34.38 Aligned_cols=42 Identities=21% Similarity=-0.017 Sum_probs=32.5
Q ss_pred CchHHHHHHHHHHcCCCCcEEEEeeEEecC--------------------CeEEEecCCcCccc
Q 010671 105 PDSSSIAYSLTLITSAPSVILWCDVQLTKD--------------------EAGICFPDLKLDNA 148 (504)
Q Consensus 105 pEnT~~a~~~A~~~g~d~~~vE~DVqlTkD--------------------g~~Vv~HD~~l~rt 148 (504)
.+++-..+..+++.|+. .||+||+-..+ +.+-|+|...++.-
T Consensus 43 ~~~s~~~i~~QLd~GvR--~LELDv~~d~~gg~~a~P~~~~~~~~~~~~~~g~~V~H~~~~d~~ 104 (324)
T cd08589 43 LDYSHPPLADQLDSGVR--QLELDVWADPEGGRYAHPLGLAPDDAAVMKKPGWKVSHIPDLDNR 104 (324)
T ss_pred ccCCCccHHHHHhhCcc--eEEEEEeecCCcccccccccccccccccccCCCeEEEcCCCcCCC
Confidence 35777889999999999 99999998654 44667777666543
No 185
>PRK00208 thiG thiazole synthase; Reviewed
Probab=32.48 E-value=1.9e+02 Score=29.00 Aligned_cols=90 Identities=11% Similarity=0.062 Sum_probs=53.0
Q ss_pred HHHHHHHHHc---CCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCccccccc-------CCCCChHHHHHHhhhcC
Q 010671 330 TTIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS-------DFPLTPSAAVDCFAHLG 399 (504)
Q Consensus 330 ~~lV~~ahk~---Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiT-------D~P~~~~~~l~~~~~~~ 399 (504)
...|+.++.. |+.|++++.++ ..+.+++.+.| ++.|.. +.+-.-.++++.+.+.
T Consensus 110 ~~tv~aa~~L~~~Gf~vlpyc~~d------------~~~ak~l~~~G---~~~vmPlg~pIGsg~gi~~~~~i~~i~e~- 173 (250)
T PRK00208 110 IETLKAAEILVKEGFVVLPYCTDD------------PVLAKRLEEAG---CAAVMPLGAPIGSGLGLLNPYNLRIIIEQ- 173 (250)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHcC---CCEeCCCCcCCCCCCCCCCHHHHHHHHHh-
Confidence 4688888888 99999999864 35667777654 998844 0100012223333221
Q ss_pred CCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeec
Q 010671 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK 447 (504)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~ 447 (504)
..-|+|+. -| =.|-.-..+|++.|||++-+---+++
T Consensus 174 -----~~vpVIve-aG------I~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 174 -----ADVPVIVD-AG------IGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred -----cCCeEEEe-CC------CCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 12354443 22 23445566888899988877655554
No 186
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=31.98 E-value=1.2e+02 Score=30.48 Aligned_cols=99 Identities=22% Similarity=0.196 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHH-HHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcCCCc
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLGKNA 402 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e-~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~~~~ 402 (504)
...++.++++|++|.+.-..-. .+..+-..+ ++++.+ .|+|.| +.| .|.++.+.++.+.+. .
T Consensus 112 ~~~i~~ak~~G~~v~~~~~~a~-----~~~~~~~~~~~~~~~~---~g~~~i~l~DT~G~~~P~~v~~lv~~l~~~---~ 180 (266)
T cd07944 112 LPLIKAIKEKGYEVFFNLMAIS-----GYSDEELLELLELVNE---IKPDVFYIVDSFGSMYPEDIKRIISLLRSN---L 180 (266)
T ss_pred HHHHHHHHHCCCeEEEEEEeec-----CCCHHHHHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHHHHHh---c
Confidence 5689999999999886643211 111111222 333343 358876 345 577777777666542 1
Q ss_pred ccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
++....-+-+|.- .|.+..|+++ |++.||++|+.-+.
T Consensus 181 ~~~~~i~~H~Hn~-~Gla~AN~la----A~~aGa~~vd~s~~ 217 (266)
T cd07944 181 DKDIKLGFHAHNN-LQLALANTLE----AIELGVEIIDATVY 217 (266)
T ss_pred CCCceEEEEeCCC-ccHHHHHHHH----HHHcCCCEEEEecc
Confidence 1111223455543 3666777775 46789998877665
No 187
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=31.79 E-value=54 Score=38.24 Aligned_cols=38 Identities=18% Similarity=0.162 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHcCCCCcEEEEeeEE--ecCCeEEEecCCcC
Q 010671 106 DSSSIAYSLTLITSAPSVILWCDVQL--TKDEAGICFPDLKL 145 (504)
Q Consensus 106 EnT~~a~~~A~~~g~d~~~vE~DVql--TkDg~~Vv~HD~~l 145 (504)
-.|.+-|++++-.|+. .||+|++= ++|+.||+.|..++
T Consensus 341 ~sSvEmYRQvLLsGcR--CVELDcWdgk~~d~EPvITHG~tm 380 (1189)
T KOG1265|consen 341 KSSVEMYRQVLLSGCR--CVELDCWDGKGEDEEPVITHGFTM 380 (1189)
T ss_pred cchHHHHHHHHHhcCc--eEEeeeecCCCCCCCceeecccch
Confidence 3499999999999999 99999995 67889999999986
No 188
>PTZ00066 pyruvate kinase; Provisional
Probab=31.74 E-value=2.5e+02 Score=31.10 Aligned_cols=136 Identities=14% Similarity=0.130 Sum_probs=77.8
Q ss_pred HHHhcCCceE-ecC--CHHHHHHHHHhcCC--CCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCcccc
Q 010671 244 VSRSVVVNYI-SSP--EVNFLRSIAARFRP--SMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIW 318 (504)
Q Consensus 244 ~l~~~g~~~i-sSf--d~~~L~~l~~~~~~--~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~ 318 (504)
.--+.++++| .|| +.+.+..+|+.... .+.+++-.+-.. +-+.++++|...++|+.+.+..+-
T Consensus 218 f~~~~~vD~IalSFVr~a~DI~~~r~~l~~~g~~~~IiAKIE~~------------~av~NldeIl~~sDGIMVARGDLG 285 (513)
T PTZ00066 218 FAIPMGCDFIALSFVQSADDVRLCRQLLGERGRHIKIIPKIENI------------EGLINFDEILAESDGIMVARGDLG 285 (513)
T ss_pred HHHhcCCCEEEECCCCCHHHHHHHHHHHHhCCCCceEEEEECCH------------HHHHHHHHHHHhcCEEEEEccccc
Confidence 3345677644 688 45666666665521 124444333111 122368889888999888775442
Q ss_pred ccCccccC-CCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCCh----HHHHHHHhhcCCCccccccc-------CCCC
Q 010671 319 PVDESLYL-LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDP----LTEYLSFIDNGDFSVDGVLS-------DFPL 386 (504)
Q Consensus 319 ~~~~~~~l-~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~----~~e~~~~i~~G~~gVDGIiT-------D~P~ 386 (504)
..-+-..+ ...+.+++.|+++|..|.+-|=-=+ .+. ...-| ......++-.| +|+|+- .||.
T Consensus 286 vEip~e~vp~~QK~II~~c~~~gkPVIvATQmLe-SMi--~np~PTRAEvsDVaNAV~DG---~DavMLSgETA~G~yPv 359 (513)
T PTZ00066 286 MEIPPEKVFLAQKMMISKCNVAGKPVITATQMLE-SMI--KNPRPTRAESTDVANAVLDG---TDCVMLSGETANGKFPV 359 (513)
T ss_pred cccChHHcchHHHHHHHHHHHhCCCEEEechhHH-HHh--hCCCCchHHHHHHHHHHHhC---CcEEEecchhcCCcCHH
Confidence 21110001 1246799999999999999874211 000 00011 22233444445 999987 8999
Q ss_pred ChHHHHHHhhh
Q 010671 387 TPSAAVDCFAH 397 (504)
Q Consensus 387 ~~~~~l~~~~~ 397 (504)
.+.+.+.....
T Consensus 360 eaV~~m~~I~~ 370 (513)
T PTZ00066 360 EAVNIMAKICF 370 (513)
T ss_pred HHHHHHHHHHH
Confidence 99988876643
No 189
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=31.61 E-value=6.9e+02 Score=28.34 Aligned_cols=157 Identities=14% Similarity=0.188 Sum_probs=78.9
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHH-HHhhHHHHHh-hhcccccCCccccccCccccCCCCHHHHH
Q 010671 257 EVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS-LLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVL 334 (504)
Q Consensus 257 d~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~-l~~~l~~i~~-~a~gi~~~~~~i~~~~~~~~l~~~~~lV~ 334 (504)
.++-|+.+++.. | ++++..++=+.+.+.. ..|.+ ... .+++. ...|+.+.+ ++. .-++...-..-++
T Consensus 62 pwerl~~~r~~~-p-nt~lqmL~Rg~N~vGy---~~~~d~vv~--~~v~~a~~~Gidv~R--ifd--~lnd~~n~~~~i~ 130 (596)
T PRK14042 62 PWSRLRQLRQAL-P-NTQLSMLLRGQNLLGY---RNYADDVVR--AFVKLAVNNGVDVFR--VFD--ALNDARNLKVAID 130 (596)
T ss_pred HHHHHHHHHHhC-C-CCceEEEecccccccc---ccCChHHHH--HHHHHHHHcCCCEEE--Ecc--cCcchHHHHHHHH
Confidence 578899999987 4 6777653312221110 12221 111 12222 123343321 111 1111222345789
Q ss_pred HHHHcCCeEEE---ecCCCCCCccccCCCChHHH-HHHHhhcCCCcccccc-cC-----CCCChHHHHHHhhhcCCCccc
Q 010671 335 DAHKERLEVFA---SNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAHLGKNASK 404 (504)
Q Consensus 335 ~ahk~Gl~V~~---wTv~n~~~~~~~y~~D~~~e-~~~~i~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~~~~~~~~ 404 (504)
.+++.|..+.+ ||...- |.-+-..+ .+++.+.| +|.|. -| .|..+.+.++.+.+. .
T Consensus 131 ~~k~~G~~~~~~i~yt~sp~------~t~e~~~~~ak~l~~~G---ad~I~IkDtaG~l~P~~v~~lv~alk~~----~- 196 (596)
T PRK14042 131 AIKSHKKHAQGAICYTTSPV------HTLDNFLELGKKLAEMG---CDSIAIKDMAGLLTPTVTVELYAGLKQA----T- 196 (596)
T ss_pred HHHHcCCEEEEEEEecCCCC------CCHHHHHHHHHHHHHcC---CCEEEeCCcccCCCHHHHHHHHHHHHhh----c-
Confidence 99999998754 565321 11111222 34445444 88654 35 466666666655431 1
Q ss_pred ccce-eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 405 SANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 405 ~~~~-~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
.-| -+-+|- -.....+.+.+|++.|||.|++-+.
T Consensus 197 -~ipi~~H~Hn-----t~Gla~an~laAieaGad~iD~ai~ 231 (596)
T PRK14042 197 -GLPVHLHSHS-----TSGLASICHYEAVLAGCNHIDTAIS 231 (596)
T ss_pred -CCEEEEEeCC-----CCCcHHHHHHHHHHhCCCEEEeccc
Confidence 122 233443 3455566666888999999988776
No 190
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=31.45 E-value=58 Score=32.81 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=28.4
Q ss_pred CchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcC
Q 010671 422 SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFIN 458 (504)
Q Consensus 422 enT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~ 458 (504)
.|-..++...++.|++++|+||+... +.+.++|-..
T Consensus 41 ~nQ~~sI~~QL~~GvR~LdLdv~~~~-~~l~v~Hg~~ 76 (267)
T cd08590 41 PNQELSITDQLDLGARFLELDVHWTT-GDLRLCHGGD 76 (267)
T ss_pred cccCcCHHHHHhhCCcEEEEeeeeCC-CCEEEEccCc
Confidence 45556788999999999999999764 6677778654
No 191
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=30.03 E-value=51 Score=33.41 Aligned_cols=58 Identities=16% Similarity=0.089 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHH
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~ 390 (504)
+++|+-|++.|..|+.|.-.+.....-++.....+.+.++-++| |.||=+||-+.-.+
T Consensus 76 ~elv~Ya~~KgVgi~lw~~~~~~~~~~~~~~~~~~~f~~~~~~G---v~GvKidF~~~d~Q 133 (273)
T PF10566_consen 76 PELVDYAKEKGVGIWLWYHSETGGNVANLEKQLDEAFKLYAKWG---VKGVKIDFMDRDDQ 133 (273)
T ss_dssp HHHHHHHHHTT-EEEEEEECCHTTBHHHHHCCHHHHHHHHHHCT---EEEEEEE--SSTSH
T ss_pred HHHHHHHHHcCCCEEEEEeCCcchhhHhHHHHHHHHHHHHHHcC---CCEEeeCcCCCCCH
Confidence 68999999999999999876542111112112234455555555 99999999887543
No 192
>PRK11572 copper homeostasis protein CutC; Provisional
Probab=29.00 E-value=3.3e+02 Score=27.26 Aligned_cols=101 Identities=12% Similarity=0.050 Sum_probs=55.3
Q ss_pred CCCCHHHHHHHHHc-CCeEEEecCCCCCCccccCCCChHHH----HHHHhhcCCCcccccccC----CCCChHHHHHHhh
Q 010671 326 LLPHTTIVLDAHKE-RLEVFASNFANDIPISFNYSYDPLTE----YLSFIDNGDFSVDGVLSD----FPLTPSAAVDCFA 396 (504)
Q Consensus 326 l~~~~~lV~~ahk~-Gl~V~~wTv~n~~~~~~~y~~D~~~e----~~~~i~~G~~gVDGIiTD----~P~~~~~~l~~~~ 396 (504)
+.|+..+++.+.+. .++|++-- ..+...|-|+.+..+. +..+.+ +|+|||+-= .-..=.+.++.+-
T Consensus 36 lTPS~g~i~~~~~~~~ipv~vMI--RPR~gdF~Ys~~E~~~M~~di~~~~~---~GadGvV~G~L~~dg~vD~~~~~~Li 110 (248)
T PRK11572 36 LTPSLGVLKSVRERVTIPVHPII--RPRGGDFCYSDGEFAAMLEDIATVRE---LGFPGLVTGVLDVDGHVDMPRMRKIM 110 (248)
T ss_pred cCCCHHHHHHHHHhcCCCeEEEE--ecCCCCCCCCHHHHHHHHHHHHHHHH---cCCCEEEEeeECCCCCcCHHHHHHHH
Confidence 44566788887775 77777653 2334455555444333 344443 458988652 1111123333332
Q ss_pred hcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEE
Q 010671 397 HLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (504)
Q Consensus 397 ~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~i 439 (504)
... .+. -+.=||..-. -.+-..|++..++.|++.|
T Consensus 111 ~~a-----~~~-~vTFHRAfD~--~~d~~~al~~l~~lG~~rI 145 (248)
T PRK11572 111 AAA-----GPL-AVTFHRAFDM--CANPLNALKQLADLGVARI 145 (248)
T ss_pred HHh-----cCC-ceEEechhhc--cCCHHHHHHHHHHcCCCEE
Confidence 221 112 3577887532 3477788888888887665
No 193
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=28.05 E-value=2.3e+02 Score=27.34 Aligned_cols=146 Identities=12% Similarity=0.176 Sum_probs=64.6
Q ss_pred cCCHHHHHHHHHhcCCCCCcEEEEeccCCc--cCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCccccCCCCHH
Q 010671 255 SPEVNFLRSIAARFRPSMTKLVFRFLGKSE--IEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLYLLPHTT 331 (504)
Q Consensus 255 Sfd~~~L~~l~~~~~~~~~~lv~~ll~~~~--~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~~~l~~~~~ 331 (504)
+++...++.+++.. +.|+.. ++.+.. +.. ++..+..|...+..++.. ++|+... .+-+ +..-+......
T Consensus 36 TPS~g~i~~~~~~~---~ipv~v-MIRpr~gdF~Y-s~~E~~~M~~dI~~~~~~GadG~VfG--~L~~-dg~iD~~~~~~ 107 (201)
T PF03932_consen 36 TPSLGLIRQAREAV---DIPVHV-MIRPRGGDFVY-SDEEIEIMKEDIRMLRELGADGFVFG--ALTE-DGEIDEEALEE 107 (201)
T ss_dssp ---HHHHHHHHHHT---TSEEEE-E--SSSS-S----HHHHHHHHHHHHHHHHTT-SEEEE----BET-TSSB-HHHHHH
T ss_pred CcCHHHHHHHHhhc---CCceEE-EECCCCCCccC-CHHHHHHHHHHHHHHHHcCCCeeEEE--eECC-CCCcCHHHHHH
Confidence 46778888888764 456553 333321 110 112222233344444433 4554332 1111 11110111134
Q ss_pred HHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC-CCC---hHHHHHHhhhcCCCcccccc
Q 010671 332 IVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF-PLT---PSAAVDCFAHLGKNASKSAN 407 (504)
Q Consensus 332 lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~-P~~---~~~~l~~~~~~~~~~~~~~~ 407 (504)
+++.++ |++ |||.. .+|...||.+.+.++++.| ++.|.|-= +.. -.+.++.+.+.. ..+
T Consensus 108 Li~~a~--~~~---~tFHR----AfD~~~d~~~al~~L~~lG---~~rVLTSGg~~~a~~g~~~L~~lv~~a-----~~~ 170 (201)
T PF03932_consen 108 LIEAAG--GMP---VTFHR----AFDEVPDPEEALEQLIELG---FDRVLTSGGAPTALEGIENLKELVEQA-----KGR 170 (201)
T ss_dssp HHHHHT--TSE---EEE-G----GGGGSSTHHHHHHHHHHHT----SEEEESTTSSSTTTCHHHHHHHHHHH-----TTS
T ss_pred HHHhcC--CCe---EEEeC----cHHHhCCHHHHHHHHHhcC---CCEEECCCCCCCHHHHHHHHHHHHHHc-----CCC
Confidence 555554 554 55543 4566678999999999866 99999863 212 233444443221 123
Q ss_pred eeEeeCCCCCCCCCCchHHHH
Q 010671 408 LLVISKNGASGDYPSCTNLAY 428 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~ 428 (504)
..|++ ++|..++|-..-.
T Consensus 171 i~Im~---GgGv~~~nv~~l~ 188 (201)
T PF03932_consen 171 IEIMP---GGGVRAENVPELV 188 (201)
T ss_dssp SEEEE---ESS--TTTHHHHH
T ss_pred cEEEe---cCCCCHHHHHHHH
Confidence 33444 3477788865433
No 194
>PLN02623 pyruvate kinase
Probab=27.74 E-value=2e+02 Score=32.44 Aligned_cols=86 Identities=20% Similarity=0.263 Sum_probs=53.4
Q ss_pred hHHHHHhhhcccccCCccccccCc-cccCCCCHHHHHHHHHcCCeEEEec------CCCCCCccccCCCCh----HHHHH
Q 010671 299 NLTFIKTFASGILVPKDYIWPVDE-SLYLLPHTTIVLDAHKERLEVFASN------FANDIPISFNYSYDP----LTEYL 367 (504)
Q Consensus 299 ~l~~i~~~a~gi~~~~~~i~~~~~-~~~l~~~~~lV~~ahk~Gl~V~~wT------v~n~~~~~~~y~~D~----~~e~~ 367 (504)
++++|..-++++.+....+-..-+ ..-......+++.++++|+.|.+.| +.+. .| ..+..
T Consensus 334 NldeIl~g~DgImIgrgDLgvelg~~~v~~~qk~Ii~~~~~~gKpvivaTQMLESMi~~~---------~PTRAEv~Dva 404 (581)
T PLN02623 334 NLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRRCRSMGKPVIVATNMLESMIVHP---------TPTRAEVSDIA 404 (581)
T ss_pred hHHHHHHhCCEEEECcchhhhhcCcHHHHHHHHHHHHHHHHhCCCEEEECchhhhcccCC---------CCCchhHHHHH
Confidence 577777767776554432211000 0000113568889999999999888 4332 33 24567
Q ss_pred HHhhcCCCccccccc-------CCCCChHHHHHHhh
Q 010671 368 SFIDNGDFSVDGVLS-------DFPLTPSAAVDCFA 396 (504)
Q Consensus 368 ~~i~~G~~gVDGIiT-------D~P~~~~~~l~~~~ 396 (504)
.++..| +|+|+- .||..+.+.+..+.
T Consensus 405 ~av~dG---~d~vmLs~Eta~G~yPveaV~~m~~I~ 437 (581)
T PLN02623 405 IAVREG---ADAVMLSGETAHGKFPLKAVKVMHTVA 437 (581)
T ss_pred HHHHcC---CCEEEecchhhcCcCHHHHHHHHHHHH
Confidence 777766 998864 48999888887654
No 195
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=27.52 E-value=3.6e+02 Score=27.48 Aligned_cols=99 Identities=15% Similarity=0.126 Sum_probs=59.3
Q ss_pred CHHHHHHHHHcCCeE--EEecCCC-CCC--ccccCCCChHHHHHHHhhcCCCcccccccCC---------CCChHHHHHH
Q 010671 329 HTTIVLDAHKERLEV--FASNFAN-DIP--ISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF---------PLTPSAAVDC 394 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V--~~wTv~n-~~~--~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~---------P~~~~~~l~~ 394 (504)
...+|+.||..|+.| =.-.+.. +.. ..-....|| ++..+|++ +.|||.+-.-+ |..-.+.++.
T Consensus 117 T~~vve~Ah~~gv~VEaElG~vgg~ed~~~~~~~~~T~p-e~a~~Fv~--~TgvD~LAvaiGt~HG~Y~~p~l~~~~l~~ 193 (283)
T PRK07998 117 TKEAVDFAKSYGVPVEAELGAILGKEDDHVSEADCKTEP-EKVKDFVE--RTGCDMLAVSIGNVHGLEDIPRIDIPLLKR 193 (283)
T ss_pred HHHHHHHHHHcCCEEEEEeccCCCccccccccccccCCH-HHHHHHHH--HhCcCeeehhccccccCCCCCCcCHHHHHH
Confidence 467999999999876 2222221 111 001122366 55677776 33588887776 8775666666
Q ss_pred hhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEee
Q 010671 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCP 442 (504)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~D 442 (504)
+.+. -.-|+ +-| |+||... .-+++|++.|+.-|-++
T Consensus 194 I~~~------~~vPL-VlH-GgSG~~~----e~~~~ai~~Gi~KiNi~ 229 (283)
T PRK07998 194 IAEV------SPVPL-VIH-GGSGIPP----EILRSFVNYKVAKVNIA 229 (283)
T ss_pred HHhh------CCCCE-EEe-CCCCCCH----HHHHHHHHcCCcEEEEC
Confidence 6542 13454 446 4566544 44689999998776654
No 196
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2.7.1.40 from EC) (PK) catalyses the final step in glycolysis [], the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP: ADP + phosphoenolpyruvate = ATP + pyruvate The enzyme, which is found in all living organisms, requires both magnesium and potassium ions for its activity. In vertebrates, there are four tissue-specific isozymes: L (liver), R (red cells), M1 (muscle, heart and brain), and M2 (early foetal tissue). In plants, PK exists as cytoplasmic and plastid isozymes, while most bacteria and lower eukaryotes have one form, except in certain bacteria, such as Escherichia coli, that have two isozymes. All isozymes appear to be tetramers of identical subunits of ~500 residues. PK helps control the rate of glycolysis, along with phosphofructokinase (IPR000023 from INTERPRO) and hexokinase (IPR001312 from INTERPRO). PK possesses allosteric sites for numerous effectors, yet the isozymes respond differently, in keeping with their different tissue distributions []. The activity of L-type (liver) PK is increased by fructose-1,6-bisphosphate (F1,6BP) and lowered by ATP and alanine (gluconeogenic precursor), therefore when glucose levels are high, glycolysis is promoted, and when levels are low, gluconeogenesis is promoted. L-type PK is also hormonally regulated, being activated by insulin and inhibited by glucagon, which covalently modifies the PK enzyme. M1-type (muscle, brain) PK is inhibited by ATP, but F1,6BP and alanine have no effect, which correlates with the function of muscle and brain, as opposed to the liver. The structure of several pyruvate kinases from various organisms have been determined [, ]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha-barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain. This entry represents the two barrel domains, the beta/alpha-barrel, and the beta-barrel inserted within it.; GO: 0000287 magnesium ion binding, 0004743 pyruvate kinase activity, 0030955 potassium ion binding, 0006096 glycolysis; PDB: 3HQQ_W 3KTX_A 3E0V_A 3QV6_D 3QV7_D 1PKL_D 3HQP_A 3QV8_D 3HQO_C 3IS4_B ....
Probab=27.33 E-value=1.4e+02 Score=31.13 Aligned_cols=137 Identities=12% Similarity=0.149 Sum_probs=74.4
Q ss_pred HHHHHhcCCceE-ecC--CHHHHHHHHHhcCCC--CCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCcc
Q 010671 242 LSVSRSVVVNYI-SSP--EVNFLRSIAARFRPS--MTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDY 316 (504)
Q Consensus 242 ~~~l~~~g~~~i-sSf--d~~~L~~l~~~~~~~--~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~ 316 (504)
+..-.+.++++| .|| +.+.+..+|+..... +.+++-.+-. .+-+.++++|..-++|+.+.+..
T Consensus 182 i~fa~~~~vD~IalSFVrsa~dV~~lr~~l~~~~~~~~iiaKIE~------------~~~v~nl~eI~~~sDgimiaRGD 249 (348)
T PF00224_consen 182 IKFAVENGVDFIALSFVRSAEDVKELRKILGEKGKDIKIIAKIET------------KEAVENLDEILEASDGIMIARGD 249 (348)
T ss_dssp HHHHHHTT-SEEEETTE-SHHHHHHHHHHHTCTTTTSEEEEEE-S------------HHHHHTHHHHHHHSSEEEEEHHH
T ss_pred HHHHHHcCCCEEEecCCCchHHHHHHHHHhhhcCcccceeecccc------------HHHHhhHHHHhhhcCeEEEecCC
Confidence 344455677744 677 577888888876431 3445433311 11234688888888888776543
Q ss_pred ccccCccccC-CCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCCh----HHHHHHHhhcCCCcccccccC-------C
Q 010671 317 IWPVDESLYL-LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDP----LTEYLSFIDNGDFSVDGVLSD-------F 384 (504)
Q Consensus 317 i~~~~~~~~l-~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~----~~e~~~~i~~G~~gVDGIiTD-------~ 384 (504)
+-..-+-..+ .....+++.|+++|.+|++-|--=+ +.--..-| ......++-.| +|||+-- |
T Consensus 250 Lg~e~~~e~v~~~Qk~ii~~~~~~~kpvi~ATq~Le---sm~~~~~PTRaEv~Dv~nav~dg---~d~vmLs~ETa~G~~ 323 (348)
T PF00224_consen 250 LGVEIPFEKVPIIQKRIIKKCNAAGKPVIVATQMLE---SMIKNPIPTRAEVSDVANAVLDG---ADAVMLSGETAIGKY 323 (348)
T ss_dssp HHHHSTGGGHHHHHHHHHHHHHHHT-EEEEESSSSG---GGGTSSS--HHHHHHHHHHHHHT----SEEEESHHHHTSSS
T ss_pred cceeeeHHHHHHHHHHHHHHHHHhCCCeeehhHhHH---HHHhCCCCchHHHhhHHHHHHcC---CCEEEecCCcCCCCC
Confidence 3211110001 1136799999999999999884311 11111112 22233344345 9999755 8
Q ss_pred CCChHHHHHHhh
Q 010671 385 PLTPSAAVDCFA 396 (504)
Q Consensus 385 P~~~~~~l~~~~ 396 (504)
|..+.+++....
T Consensus 324 p~~~v~~~~~i~ 335 (348)
T PF00224_consen 324 PVEAVKTMARII 335 (348)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887776543
No 197
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=27.32 E-value=4.7e+02 Score=27.04 Aligned_cols=99 Identities=23% Similarity=0.220 Sum_probs=58.4
Q ss_pred HHHHHHHHHcC--CeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccC-CCC--------------ChHHHH
Q 010671 330 TTIVLDAHKER--LEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD-FPL--------------TPSAAV 392 (504)
Q Consensus 330 ~~lV~~ahk~G--l~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD-~P~--------------~~~~~l 392 (504)
.++++.+++.+ +.|.+.++.+ .+....+++.| +|+|..- -|. ++....
T Consensus 123 ~~~i~~ik~~~p~v~Vi~G~v~t------------~~~A~~l~~aG---aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~ 187 (325)
T cd00381 123 IEMIKFIKKKYPNVDVIAGNVVT------------AEAARDLIDAG---ADGVKVGIGPGSICTTRIVTGVGVPQATAVA 187 (325)
T ss_pred HHHHHHHHHHCCCceEEECCCCC------------HHHHHHHHhcC---CCEEEECCCCCcCcccceeCCCCCCHHHHHH
Confidence 46788888887 7888877643 35667788766 9999741 111 111111
Q ss_pred HHhhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe------------eeeeecCCeEEEec
Q 010671 393 DCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC------------PVQMSKDGVPFCLS 455 (504)
Q Consensus 393 ~~~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~------------Dv~~t~Dg~~v~~H 455 (504)
++.... .....| |||--|- .|-....+|++.||+++-+ |+. .+||+.+-.|
T Consensus 188 ~v~~~~----~~~~vp-VIA~GGI------~~~~di~kAla~GA~~VmiGt~fa~t~Es~g~~~-~~~g~~~~~~ 250 (325)
T cd00381 188 DVAAAA----RDYGVP-VIADGGI------RTSGDIVKALAAGADAVMLGSLLAGTDESPGEYI-EINGKRYKEY 250 (325)
T ss_pred HHHHHH----hhcCCc-EEecCCC------CCHHHHHHHHHcCCCEEEecchhcccccCCCcEE-EECCeeeeeE
Confidence 221111 011234 5655443 2345677899999999988 654 4777766543
No 198
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=27.25 E-value=6.6e+02 Score=25.37 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=20.2
Q ss_pred CCCCchHHHHHHHHHcCCCEEEeeeeeecC
Q 010671 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKD 448 (504)
Q Consensus 419 ~~penT~~a~~~a~~~g~~~iE~Dv~~t~D 448 (504)
...|=-..--++|++.|+|++-+.||..+|
T Consensus 206 G~r~~v~~la~AAvA~GadGl~iEvHpdP~ 235 (264)
T PRK05198 206 GQREFVPVLARAAVAVGVAGLFIETHPDPD 235 (264)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeCCCcc
Confidence 334433444468889999999888886544
No 199
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain. 2-isopropylmalate synthase (IPMS) catalyzes an aldol-type condensation of acetyl-CoA and 2-oxoisovalerate yielding 2-isopropylmalate and CoA, the first committed step in leucine biosynthesis. This family includes the Arabidopsis thaliana IPMS1 and IPMS2 proteins, the Glycine max GmN56 protein, and the Brassica insularis BatIMS protein. This family also includes a group of archeal IPMS-like proteins represented by the Methanocaldococcus jannaschii AksA protein. AksA catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate, one of 13 steps in the conversion of alpha-ketoglutarate and acetylCoA to alpha-ketosuberate, a precursor to coenzyme B and biotin. AksA also catalyzes the condensation of alpha-ketoadipate or alpha-ketopimelate with acetylCoA to form, respectively, the (R)-homocitrate homologs (R)-2-hydroxy-1,2,5-pentanetricarboxylic acid and (R)-2-h
Probab=26.80 E-value=2.7e+02 Score=27.64 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~~ 400 (504)
...++.+++.|++|.. +..... ..++ ..-+.++.+. |+|.| +-| .|..+.++++.+.+..+
T Consensus 117 ~~~i~~a~~~G~~v~~-~~~~~~------~~~~~~~~~~~~~~~~~---G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 186 (268)
T cd07940 117 VEAVEYAKSHGLDVEF-SAEDAT------RTDLDFLIEVVEAAIEA---GATTINIPDTVGYLTPEEFGELIKKLKENVP 186 (268)
T ss_pred HHHHHHHHHcCCeEEE-eeecCC------CCCHHHHHHHHHHHHHc---CCCEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 4688999999999873 332211 1122 1223444444 48775 344 57777777776655322
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+. ....-+-+|.- .|.+-.|+++|+ +.|+++|+.-+.
T Consensus 187 ~~--~i~l~~H~Hn~-~GlA~An~laAi----~aG~~~iD~s~~ 223 (268)
T cd07940 187 NI--KVPISVHCHND-LGLAVANSLAAV----EAGARQVECTIN 223 (268)
T ss_pred CC--ceeEEEEecCC-cchHHHHHHHHH----HhCCCEEEEEee
Confidence 10 01222455543 356666777554 569999876654
No 200
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=26.71 E-value=2.5e+02 Score=31.74 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCeE---EEecCCCCCCccccCCCChHHH-HHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcC
Q 010671 330 TTIVLDAHKERLEV---FASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLG 399 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V---~~wTv~n~~~~~~~y~~D~~~e-~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~ 399 (504)
...++.++++|+.+ .++|....... |-..+ .+.+.+. |+|.| |.| .|..+.+.++.+...-
T Consensus 127 ~~ai~~ak~~G~~~~~~i~yt~~p~~~~------~~~~~~a~~l~~~---Gad~i~i~Dt~G~l~P~~~~~lv~~lk~~~ 197 (593)
T PRK14040 127 ETALKAVRKVGAHAQGTLSYTTSPVHTL------QTWVDLAKQLEDM---GVDSLCIKDMAGLLKPYAAYELVSRIKKRV 197 (593)
T ss_pred HHHHHHHHHcCCeEEEEEEEeeCCccCH------HHHHHHHHHHHHc---CCCEEEECCCCCCcCHHHHHHHHHHHHHhc
Confidence 45889999999985 55766432110 11222 3344444 48876 456 4666677776665321
Q ss_pred CCcccccce-eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 400 KNASKSANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 400 ~~~~~~~~~-~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
..| -+-+|.- .+...+.+.+|++.||++|++-+.
T Consensus 198 ------~~pi~~H~Hnt-----~GlA~An~laAieAGa~~vD~ai~ 232 (593)
T PRK14040 198 ------DVPLHLHCHAT-----TGLSTATLLKAIEAGIDGVDTAIS 232 (593)
T ss_pred ------CCeEEEEECCC-----CchHHHHHHHHHHcCCCEEEeccc
Confidence 122 2455543 344455555788999999887665
No 201
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=26.44 E-value=1.8e+02 Score=30.31 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=56.9
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh--HHHHHHHhhcCCCcccccc-cC-----CCCChHHHHHHhhhcCCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP--LTEYLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAHLGKN 401 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~--~~e~~~~i~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~~~~~ 401 (504)
...++.+++.|++|.+.-.... ..+| ..++.+.+. ++|+|.|. .| .|..+.+.++.+.+.-
T Consensus 118 ~~~i~~ak~~G~~v~~~l~~a~-------~~~~e~l~~~a~~~~--~~Ga~~i~i~DT~G~~~P~~v~~~v~~l~~~l-- 186 (337)
T PRK08195 118 EQHIGLARELGMDTVGFLMMSH-------MAPPEKLAEQAKLME--SYGAQCVYVVDSAGALLPEDVRDRVRALRAAL-- 186 (337)
T ss_pred HHHHHHHHHCCCeEEEEEEecc-------CCCHHHHHHHHHHHH--hCCCCEEEeCCCCCCCCHHHHHHHHHHHHHhc--
Confidence 5689999999999988654321 1233 222222222 34588754 56 5777777776665421
Q ss_pred cccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
++....-+-+|.- -|.+..|+++| ++.||++|+.-+.
T Consensus 187 -~~~i~ig~H~Hnn-lGla~ANslaA----i~aGa~~iD~Sl~ 223 (337)
T PRK08195 187 -KPDTQVGFHGHNN-LGLGVANSLAA----VEAGATRIDGSLA 223 (337)
T ss_pred -CCCCeEEEEeCCC-cchHHHHHHHH----HHhCCCEEEecCh
Confidence 1111223455543 35667777755 5689998776654
No 202
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=26.43 E-value=1.8e+02 Score=28.85 Aligned_cols=96 Identities=18% Similarity=0.123 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh--HHH-HHHHhhcCCCcccccc-cC-----CCCChHHHHHHhhhcCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP--LTE-YLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~--~~e-~~~~i~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~~~~ 400 (504)
...++.+++.|++|.+....- +..+| ..+ .+.+.+ .|+|.|. -| .|..+.++.+.+.+..+
T Consensus 115 ~~~i~~ak~~G~~v~~~~~~~-------~~~~~~~~~~~~~~~~~---~G~d~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 184 (263)
T cd07943 115 EQHIGAARKLGMDVVGFLMMS-------HMASPEELAEQAKLMES---YGADCVYVTDSAGAMLPDDVRERVRALREALD 184 (263)
T ss_pred HHHHHHHHHCCCeEEEEEEec-------cCCCHHHHHHHHHHHHH---cCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC
Confidence 568999999999987775321 11233 122 233333 4588753 33 46666666666554211
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
. ...-+-+|.- .|.+..|+++|+ +.||++|+.-+.
T Consensus 185 ---~-~~l~~H~Hn~-~GlA~AN~laAi----~aGa~~vd~s~~ 219 (263)
T cd07943 185 ---P-TPVGFHGHNN-LGLAVANSLAAV----EAGATRIDGSLA 219 (263)
T ss_pred ---C-ceEEEEecCC-cchHHHHHHHHH----HhCCCEEEeecc
Confidence 1 1222455543 366777777665 569998876654
No 203
>COG2200 Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms]
Probab=26.11 E-value=88 Score=31.03 Aligned_cols=40 Identities=25% Similarity=0.218 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~ 384 (504)
..+++.||+.|++|.+.+|.++ ++...+.++| ||.+.-.+
T Consensus 196 ~~iv~la~~l~~~vvaEGVEt~------------~ql~~L~~~G---~~~~QGyl 235 (256)
T COG2200 196 RAIVALAHKLGLTVVAEGVETE------------EQLDLLRELG---CDYLQGYL 235 (256)
T ss_pred HHHHHHHHHCCCEEEEeecCCH------------HHHHHHHHcC---CCeEeecc
Confidence 6799999999999999999764 5666666665 88666554
No 204
>COG4747 ACT domain-containing protein [General function prediction only]
Probab=25.98 E-value=83 Score=27.88 Aligned_cols=44 Identities=16% Similarity=0.300 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHH
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~ 394 (504)
.+....+.++|+.+-+.|+.+ .|+||+=-++.|.|+.+.++++.
T Consensus 18 ~~~~~~L~eagINiRA~tiAd---------------------t~dFGIiRmvV~~~d~A~~~Lee 61 (142)
T COG4747 18 ASVANKLKEAGINIRAFTIAD---------------------TGDFGIIRMVVDRPDEAHSVLEE 61 (142)
T ss_pred HHHHHHHHHcCCceEEEEecc---------------------ccCcceEEEEcCChHHHHHHHHH
Confidence 457788899999999999964 35788989999999999988864
No 205
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.92 E-value=6.8e+02 Score=25.04 Aligned_cols=40 Identities=18% Similarity=0.042 Sum_probs=24.2
Q ss_pred ceeEe--eCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCC
Q 010671 407 NLLVI--SKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDG 449 (504)
Q Consensus 407 ~~~ii--aHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg 449 (504)
.|+|+ .|=++.. |=-...-.+|+..|||++=+.+|.++|.
T Consensus 185 lPVivd~SHs~G~r---~~v~~~a~AAvA~GAdGl~IE~H~~P~~ 226 (250)
T PRK13397 185 LPIIVDVSHSTGRR---DLLLPAAKIAKAVGANGIMMEVHPDPDH 226 (250)
T ss_pred CCeEECCCCCCccc---chHHHHHHHHHHhCCCEEEEEecCCccc
Confidence 45554 4654422 2223556788999999776667765554
No 206
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=25.84 E-value=3.5e+02 Score=27.40 Aligned_cols=103 Identities=18% Similarity=0.138 Sum_probs=59.2
Q ss_pred CHHHHHHHHHcCCeEEEecC--C-CCCC-ccccCCCChHHHHHHHhhcCCCccccccc----------CCCCChHHHHHH
Q 010671 329 HTTIVLDAHKERLEVFASNF--A-NDIP-ISFNYSYDPLTEYLSFIDNGDFSVDGVLS----------DFPLTPSAAVDC 394 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv--~-n~~~-~~~~y~~D~~~e~~~~i~~G~~gVDGIiT----------D~P~~~~~~l~~ 394 (504)
...+++.+|+.|..|-+=.. . .+.. .....++...++..++.+. -|||.+-- +.|..-.+.++.
T Consensus 117 t~~v~~~a~~~gv~veaE~ghlG~~d~~~~~~g~s~t~~eea~~f~~~--tg~DyLAvaiG~~hg~~~~~~~l~~~~L~~ 194 (281)
T PRK06806 117 TKEIVELAKQYGATVEAEIGRVGGSEDGSEDIEMLLTSTTEAKRFAEE--TDVDALAVAIGNAHGMYNGDPNLRFDRLQE 194 (281)
T ss_pred HHHHHHHHHHcCCeEEEEeeeECCccCCcccccceeCCHHHHHHHHHh--hCCCEEEEccCCCCCCCCCCCccCHHHHHH
Confidence 35688888888877633221 1 1111 1112223344667777753 23776665 455555666666
Q ss_pred hhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeee
Q 010671 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQM 445 (504)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~ 445 (504)
+.+. -.-| +++| |+||..+|| +.++++.|++.|-+.--+
T Consensus 195 i~~~------~~iP-lV~h-G~SGI~~e~----~~~~i~~G~~kinv~T~i 233 (281)
T PRK06806 195 INDV------VHIP-LVLH-GGSGISPED----FKKCIQHGIRKINVATAT 233 (281)
T ss_pred HHHh------cCCC-EEEE-CCCCCCHHH----HHHHHHcCCcEEEEhHHH
Confidence 5542 1234 6888 457777777 557889999888775444
No 207
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=25.21 E-value=7e+02 Score=24.98 Aligned_cols=88 Identities=9% Similarity=0.128 Sum_probs=52.2
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhc--------CCCcccccccCCCCChHHHHHHhhhcCC
Q 010671 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDN--------GDFSVDGVLSDFPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~--------G~~gVDGIiTD~P~~~~~~l~~~~~~~~ 400 (504)
...+.+.++++|+....-. ... -|.+.+..+.+. ...|+.|.-++.|..+.++++..++.
T Consensus 133 ~~~~~~~~~~~gi~~I~lv-~Pt---------T~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~-- 200 (263)
T CHL00200 133 SDYLISVCNLYNIELILLI-APT---------SSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKM-- 200 (263)
T ss_pred HHHHHHHHHHcCCCEEEEE-CCC---------CCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHh--
Confidence 4578999999999754332 211 122333332222 13568898888888888888766542
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEE
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~i 439 (504)
...|+.+ |+ | =||..-.++..+.|||++
T Consensus 201 ----t~~Pi~v---GF-G---I~~~e~~~~~~~~GADGv 228 (263)
T CHL00200 201 ----TNKPIIL---GF-G---ISTSEQIKQIKGWNINGI 228 (263)
T ss_pred ----cCCCEEE---EC-C---cCCHHHHHHHHhcCCCEE
Confidence 2356665 22 2 344555667788888664
No 208
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=24.93 E-value=83 Score=31.73 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=27.3
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~ 387 (504)
-++++.||+.|+-..+|.++. ++..++.+.| +|.|+....-+
T Consensus 140 Vemi~~A~~~gl~T~~yvf~~-------------e~A~~M~~AG---aDiiv~H~GlT 181 (268)
T PF09370_consen 140 VEMIRKAHEKGLFTTAYVFNE-------------EQARAMAEAG---ADIIVAHMGLT 181 (268)
T ss_dssp HHHHHHHHHTT-EE--EE-SH-------------HHHHHHHHHT----SEEEEE-SS-
T ss_pred HHHHHHHHHCCCeeeeeecCH-------------HHHHHHHHcC---CCEEEecCCcc
Confidence 369999999999999999863 4566777666 99999876433
No 209
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=24.83 E-value=2.1e+02 Score=31.27 Aligned_cols=96 Identities=18% Similarity=0.146 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCeEE---EecCCCCCCccccCCCChH-HHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcC
Q 010671 330 TTIVLDAHKERLEVF---ASNFANDIPISFNYSYDPL-TEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLG 399 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~---~wTv~n~~~~~~~y~~D~~-~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~ 399 (504)
...++.+++.|+.|. ++|+..... .+-. +-.+++.+.| +|.| |.| .|..+.+.++.+.+.-
T Consensus 125 ~~~i~~ak~~G~~v~~~i~~t~~p~~t------~e~~~~~a~~l~~~G---ad~I~i~Dt~G~l~P~~v~~Lv~~lk~~~ 195 (467)
T PRK14041 125 EKSIEVAKKHGAHVQGAISYTVSPVHT------LEYYLEFARELVDMG---VDSICIKDMAGLLTPKRAYELVKALKKKF 195 (467)
T ss_pred HHHHHHHHHCCCEEEEEEEeccCCCCC------HHHHHHHHHHHHHcC---CCEEEECCccCCcCHHHHHHHHHHHHHhc
Confidence 457899999999886 444432100 0111 2234455444 8876 455 4666666666654321
Q ss_pred CCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+ -..-+-+|-- .|.+..|++ +|++.|||+|++-|-
T Consensus 196 ----~-vpI~~H~Hnt-~GlA~AN~l----aAieaGad~vD~sv~ 230 (467)
T PRK14041 196 ----G-VPVEVHSHCT-TGLASLAYL----AAVEAGADMFDTAIS 230 (467)
T ss_pred ----C-CceEEEecCC-CCcHHHHHH----HHHHhCCCEEEeecc
Confidence 1 1123455543 355555555 678899999888776
No 210
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=24.44 E-value=6.3e+02 Score=26.37 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=21.5
Q ss_pred hHHHHHHHHHcCCCEEEeeeeeecCCeE
Q 010671 424 TNLAYQKAISDGVDFIDCPVQMSKDGVP 451 (504)
Q Consensus 424 T~~a~~~a~~~g~~~iE~Dv~~t~Dg~~ 451 (504)
....-.+|+..|||++-+.+|.|.|..+
T Consensus 279 v~~~a~AAvA~GAdGliIE~H~~pd~al 306 (335)
T PRK08673 279 VEPLALAAVAAGADGLIVEVHPDPEKAL 306 (335)
T ss_pred hHHHHHHHHHhCCCEEEEEecCCcccCC
Confidence 3455678999999988888888777654
No 211
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=23.80 E-value=88 Score=31.54 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=36.6
Q ss_pred eeEeeCCCCCC-----CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCc
Q 010671 408 LLVISKNGASG-----DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI 457 (504)
Q Consensus 408 ~~iiaHRG~~~-----~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~ 457 (504)
..+-+|..+.. ....|--..+...++.|++++++||+.. ++.+.++|..
T Consensus 16 t~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~-~~~~~lcH~~ 69 (270)
T cd08588 16 TFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDA-NGGLRLCHSV 69 (270)
T ss_pred eeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEec-CCCEEEECCC
Confidence 45667765432 2345666778889999999999999985 7778888975
No 212
>PRK11572 copper homeostasis protein CutC; Provisional
Probab=23.41 E-value=2.8e+02 Score=27.79 Aligned_cols=156 Identities=15% Similarity=0.282 Sum_probs=77.3
Q ss_pred cCCHHHHHHHHHhcCCCCCcEEEEeccCC--ccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCccccCCCCHH
Q 010671 255 SPEVNFLRSIAARFRPSMTKLVFRFLGKS--EIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLYLLPHTT 331 (504)
Q Consensus 255 Sfd~~~L~~l~~~~~~~~~~lv~~ll~~~--~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~~~l~~~~~ 331 (504)
++++..++.+++.. ..|+.. ++.+. ++.. +...+..|...+..++.. ++|+... .+-+ +..-+......
T Consensus 37 TPS~g~i~~~~~~~---~ipv~v-MIRPR~gdF~Y-s~~E~~~M~~di~~~~~~GadGvV~G--~L~~-dg~vD~~~~~~ 108 (248)
T PRK11572 37 TPSLGVLKSVRERV---TIPVHP-IIRPRGGDFCY-SDGEFAAMLEDIATVRELGFPGLVTG--VLDV-DGHVDMPRMRK 108 (248)
T ss_pred CCCHHHHHHHHHhc---CCCeEE-EEecCCCCCCC-CHHHHHHHHHHHHHHHHcCCCEEEEe--eECC-CCCcCHHHHHH
Confidence 57888888888765 456553 33332 2211 112222333344444443 4554332 1111 11111111234
Q ss_pred HHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC-CCChHHHHHHhhhcCCCcccccceeE
Q 010671 332 IVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF-PLTPSAAVDCFAHLGKNASKSANLLV 410 (504)
Q Consensus 332 lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~-P~~~~~~l~~~~~~~~~~~~~~~~~i 410 (504)
+++.++ |+ .|||... +|...||.+.+.++++.| +|.|.|-= +..+.+-++.+.+...... .. .|
T Consensus 109 Li~~a~--~~---~vTFHRA----fD~~~d~~~al~~l~~lG---~~rILTSGg~~~a~~g~~~L~~lv~~a~--~~-~I 173 (248)
T PRK11572 109 IMAAAG--PL---AVTFHRA----FDMCANPLNALKQLADLG---VARILTSGQQQDAEQGLSLIMELIAASD--GP-II 173 (248)
T ss_pred HHHHhc--CC---ceEEech----hhccCCHHHHHHHHHHcC---CCEEECCCCCCCHHHHHHHHHHHHHhcC--CC-EE
Confidence 555553 44 5677654 444458888899999765 99999863 3334443333333211111 11 24
Q ss_pred eeCCCCCCCCCCchHHHHHHHHHcCCCEEE
Q 010671 411 ISKNGASGDYPSCTNLAYQKAISDGVDFID 440 (504)
Q Consensus 411 iaHRG~~~~~penT~~a~~~a~~~g~~~iE 440 (504)
++ ++|..++|-.. + .+.|+..+-
T Consensus 174 m~---GgGV~~~Nv~~-l---~~tG~~~~H 196 (248)
T PRK11572 174 MA---GAGVRLSNLHK-F---LDAGVREVH 196 (248)
T ss_pred Ee---CCCCCHHHHHH-H---HHcCCCEEe
Confidence 43 46788888543 3 247875443
No 213
>cd07947 DRE_TIM_Re_CS Clostridium kluyveri Re-citrate synthase and related proteins, catalytic TIM barrel domain. Re-citrate synthase (Re-CS) is a Clostridium kluyveri enzyme that converts acetyl-CoA and oxaloacetate to citrate. In most organisms, this reaction is catalyzed by Si-citrate synthase which is Si-face stereospecific with respect to C-2 of oxaloacetate, and phylogenetically unrelated to Re-citrate synthase. Re-citrate synthase is also found in a few other strictly anaerobic organisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with
Probab=23.28 E-value=3.1e+02 Score=27.73 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccc-cCCCChHHHHHHHhhcCCCccc-cc-ccCC------------CCChHHHHHH
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISF-NYSYDPLTEYLSFIDNGDFSVD-GV-LSDF------------PLTPSAAVDC 394 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~-~y~~D~~~e~~~~i~~G~~gVD-GI-iTD~------------P~~~~~~l~~ 394 (504)
.+.|+.|++.|+.|-+.- .+.....+ ++..+-..++..... +.|+| -| +.|- |..+.+.++.
T Consensus 118 ~~~v~~a~~~g~~v~~~~-ed~~r~d~~~~v~~~~~~~~~~~~--~~G~~~~i~l~DTvG~a~P~~~~~~p~~v~~l~~~ 194 (279)
T cd07947 118 LEIVEEALDHGIKPRCHL-EDITRADIYGFVLPFVNKLMKLSK--ESGIPVKIRLCDTLGYGVPYPGASLPRSVPKIIYG 194 (279)
T ss_pred HHHHHHHHHCCCeEEEEE-EcccCCCcccchHHHHHHHHHHHH--HCCCCEEEEeccCCCcCCccccccchHHHHHHHHH
Confidence 568899999999876554 22211111 000011223333221 23588 45 5663 3344455554
Q ss_pred hhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+.+... .+....-+-.|.= .|.+..|+++ |++.||++++.-|.
T Consensus 195 l~~~~~--~p~~~l~~H~Hn~-~Gla~AN~la----A~~aG~~~vd~sv~ 237 (279)
T cd07947 195 LRKDCG--VPSENLEWHGHND-FYKAVANAVA----AWLYGASWVNCTLL 237 (279)
T ss_pred HHHhcC--CCCceEEEEecCC-CChHHHHHHH----HHHhCCCEEEEecc
Confidence 433100 0111123455542 3667777774 56779998876654
No 214
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=23.25 E-value=89 Score=30.69 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=31.3
Q ss_pred chHHHHHHHHHcCCCEEEeeeeeec-CCeEEEecCcCcc
Q 010671 423 CTNLAYQKAISDGVDFIDCPVQMSK-DGVPFCLSFINLI 460 (504)
Q Consensus 423 nT~~a~~~a~~~g~~~iE~Dv~~t~-Dg~~v~~Hd~~l~ 460 (504)
|--..+...++.|++++|+||+... ++.+.++|.....
T Consensus 38 ~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~ 76 (271)
T cd08557 38 TQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLL 76 (271)
T ss_pred ccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEcccccc
Confidence 3345677889999999999999877 7899999987663
No 215
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. Members of this protein family are 4-hydroxy-2-oxovalerate aldolase, also called 4-hydroxy-2-ketovalerate aldolase and 2-oxo-4-hydroxypentanoate aldolase. This enzyme, part of the pathway for the meta-cleavage of catechol, produces pyruvate and acetaldehyde. Acetaldehyde is then converted by acetaldehyde dehydrogenase (acylating) (DmpF; EC 1.2.1.10) to acetyl-CoA. The two enzymes are tightly associated.
Probab=23.10 E-value=2.3e+02 Score=29.52 Aligned_cols=98 Identities=14% Similarity=0.166 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh--HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcCCC
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP--LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLGKN 401 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~--~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~~~ 401 (504)
...++.+++.|++|.+.-.... ..+| ..++.+.+. +.|+|.| ++| .|..+.+....+.+.
T Consensus 117 ~~~i~~ak~~G~~v~~~l~~s~-------~~~~e~l~~~a~~~~--~~Ga~~i~i~DT~G~~~P~~v~~~v~~l~~~--- 184 (333)
T TIGR03217 117 EQHIGMARELGMDTVGFLMMSH-------MTPPEKLAEQAKLME--SYGADCVYIVDSAGAMLPDDVRDRVRALKAV--- 184 (333)
T ss_pred HHHHHHHHHcCCeEEEEEEccc-------CCCHHHHHHHHHHHH--hcCCCEEEEccCCCCCCHHHHHHHHHHHHHh---
Confidence 5689999999999887654321 1233 233333333 3458874 556 466666666666542
Q ss_pred cccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
.++....-+-+|.- -|.+..||++ |++.||+.|+.-+.
T Consensus 185 l~~~i~ig~H~Hnn-lGla~ANsla----Ai~aGa~~iD~Sl~ 222 (333)
T TIGR03217 185 LKPETQVGFHAHHN-LSLAVANSIA----AIEAGATRIDASLR 222 (333)
T ss_pred CCCCceEEEEeCCC-CchHHHHHHH----HHHhCCCEEEeecc
Confidence 11111223455543 3556667775 45689998766554
No 216
>PRK06739 pyruvate kinase; Validated
Probab=23.04 E-value=3.8e+02 Score=28.24 Aligned_cols=137 Identities=13% Similarity=0.198 Sum_probs=76.0
Q ss_pred HHHHhcCCceE-ecC--CHHHHHHHHHhcCC---CCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCcc
Q 010671 243 SVSRSVVVNYI-SSP--EVNFLRSIAARFRP---SMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDY 316 (504)
Q Consensus 243 ~~l~~~g~~~i-sSf--d~~~L~~l~~~~~~---~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~ 316 (504)
+.-.+.++++| -|| +.+-+..+|+.... .+.+++-.+-.. +-+.+++.|...++|+.+.+..
T Consensus 172 ~f~~~~~vD~ia~SFVr~~~Dv~~~r~~l~~~g~~~~~IiaKIE~~------------~av~nl~eI~~~sDgimVARGD 239 (352)
T PRK06739 172 QFLLEEDVDFIACSFVRKPSHIKEIRDFIQQYKETSPNLIAKIETM------------EAIENFQDICKEADGIMIARGD 239 (352)
T ss_pred HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCCcEEEEECCH------------HHHHHHHHHHHhcCEEEEECcc
Confidence 33445677644 677 45556666665421 134454433111 1223688888889998887654
Q ss_pred ccccCccccC-CCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCCh----HHHHHHHhhcCCCccccccc-------CC
Q 010671 317 IWPVDESLYL-LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDP----LTEYLSFIDNGDFSVDGVLS-------DF 384 (504)
Q Consensus 317 i~~~~~~~~l-~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~----~~e~~~~i~~G~~gVDGIiT-------D~ 384 (504)
+--.-+-..+ ...+..++.|+++|.+|.+-|=-=+ +.-...-| +.....++-.| +|+|+- .|
T Consensus 240 Lgve~~~e~vp~~Qk~Ii~~c~~~gkPvIvATqmLe---SM~~~p~PTRAEvsDVanaV~dG---~D~vMLS~ETA~G~y 313 (352)
T PRK06739 240 LGVELPYQFIPLLQKMMIQECNRTNTYVITATQMLQ---SMVDHSIPTRAEVTDVFQAVLDG---TNAVMLSAESASGEH 313 (352)
T ss_pred cccccCHHHHHHHHHHHHHHHHHhCCCEEEEcchHH---hhccCCCCChHHHHHHHHHHHhC---CcEEEEcccccCCCC
Confidence 4211110000 1136789999999999999884211 00000011 22333445445 999965 48
Q ss_pred CCChHHHHHHhhh
Q 010671 385 PLTPSAAVDCFAH 397 (504)
Q Consensus 385 P~~~~~~l~~~~~ 397 (504)
|..+.+++.....
T Consensus 314 PveaV~~m~~I~~ 326 (352)
T PRK06739 314 PIESVSTLRLVSE 326 (352)
T ss_pred HHHHHHHHHHHHH
Confidence 9988888876543
No 217
>PF10210 MRP-S32: Mitochondrial 28S ribosomal protein S32; InterPro: IPR019346 This entry represents a family of short proteins; each approximately 100 amino acid residues in length. They are identified as the mitochondrial 28S ribosomal proteins S32.
Probab=22.58 E-value=64 Score=27.45 Aligned_cols=17 Identities=18% Similarity=0.464 Sum_probs=13.8
Q ss_pred EeeEEecCC-eEEEecCC
Q 010671 127 CDVQLTKDE-AGICFPDL 143 (504)
Q Consensus 127 ~DVqlTkDg-~~Vv~HD~ 143 (504)
..|-+|.|| .+||+|=.
T Consensus 4 ~~iavT~dG~tIVcwHP~ 21 (96)
T PF10210_consen 4 VEIAVTSDGRTIVCWHPE 21 (96)
T ss_pred eeEEEecCCCEEEEeCCC
Confidence 357899999 88999953
No 218
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=22.57 E-value=4.1e+02 Score=27.80 Aligned_cols=105 Identities=12% Similarity=0.208 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCeEEEe--cCCCC--CCccccCC-CChH--H-HHHHHhhcCCCcccccccCCCCCh-------------
Q 010671 330 TTIVLDAHKERLEVFAS--NFAND--IPISFNYS-YDPL--T-EYLSFIDNGDFSVDGVLSDFPLTP------------- 388 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~w--Tv~n~--~~~~~~y~-~D~~--~-e~~~~i~~G~~gVDGIiTD~P~~~------------- 388 (504)
..+.+.|++.|++++.. +.... ...+..|. .+|. . -++.+.+ -++|||-+=+.+|..+
T Consensus 146 ~rv~~ec~~~giPlllE~l~y~~~~~~~~~~~~a~~~p~~V~~a~r~~~~-~elGaDvlKve~p~~~~~veg~~~~~~~~ 224 (340)
T PRK12858 146 ERVGAECRANDIPFFLEPLTYDGKGSDKKAEEFAKVKPEKVIKTMEEFSK-PRYGVDVLKVEVPVDMKFVEGFDGFEEAY 224 (340)
T ss_pred HHHHHHHHHcCCceEEEEeccCCCccccccccccccCHHHHHHHHHHHhh-hccCCeEEEeeCCCCcccccccccccccc
Confidence 45788999999998874 44321 11111121 2331 1 2333332 1367999999999653
Q ss_pred --HHHHHHhhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCC--CEEEe
Q 010671 389 --SAAVDCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGV--DFIDC 441 (504)
Q Consensus 389 --~~~l~~~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~--~~iE~ 441 (504)
.++.+.|...- ...+.|.|+.-.|. ..+--+...+.|++.|+ .++-|
T Consensus 225 ~~~~~~~~f~~~~---~a~~~P~vvlsgG~---~~~~f~~~l~~A~~aGa~f~Gvl~ 275 (340)
T PRK12858 225 TQEEAFKLFREQS---DATDLPFIFLSAGV---SPELFRRTLEFACEAGADFSGVLC 275 (340)
T ss_pred cHHHHHHHHHHHH---hhCCCCEEEECCCC---CHHHHHHHHHHHHHcCCCccchhh
Confidence 11222232211 11356888887775 23446777788999999 66655
No 219
>TIGR01859 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist. This model represents of one of several subtypes of the class II fructose-1,6-bisphosphate aldolase, an enzyme of glycolysis. The subtypes are split into several models to allow separation of a family of tagatose bisphosphate aldolases. This form is found in Gram-positive bacteria, a variety of Gram-negative, and in amitochondriate protists. The class II enzymes share homology with tagatose bisphosphate aldolase but not with class I aldolase.
Probab=22.50 E-value=5.9e+02 Score=25.79 Aligned_cols=99 Identities=20% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCeEE--EecCCCCCCcccc--CCCChHHHHHHHhh----------cCCCcccccccCCCCChHHHHHHh
Q 010671 330 TTIVLDAHKERLEVF--ASNFANDIPISFN--YSYDPLTEYLSFID----------NGDFSVDGVLSDFPLTPSAAVDCF 395 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~--~wTv~n~~~~~~~--y~~D~~~e~~~~i~----------~G~~gVDGIiTD~P~~~~~~l~~~ 395 (504)
..+++.+|+.|..|- .-++......... .++...++..++++ -| .+.|+.+..|..-.+.++.+
T Consensus 118 ~~v~~~a~~~gv~Ve~ElG~~gg~ed~~~g~~~~~t~~eea~~f~~~tgvD~Lavs~G--t~hg~~~~~~~l~~e~L~~i 195 (282)
T TIGR01859 118 KKVVEIAHAKGVSVEAELGTLGGIEDGVDEKEAELADPDEAEQFVKETGVDYLAAAIG--TSHGKYKGEPGLDFERLKEI 195 (282)
T ss_pred HHHHHHHHHcCCEEEEeeCCCcCccccccccccccCCHHHHHHHHHHHCcCEEeeccC--ccccccCCCCccCHHHHHHH
Q ss_pred hhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEee
Q 010671 396 AHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCP 442 (504)
Q Consensus 396 ~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~D 442 (504)
.+. ...-+++| |+||.-+|| ++++++.|++.|-++
T Consensus 196 ~~~-------~~iPlv~h-GgSGi~~e~----i~~~i~~Gi~kiNv~ 230 (282)
T TIGR01859 196 KEL-------TNIPLVLH-GASGIPEEQ----IKKAIKLGIAKINID 230 (282)
T ss_pred HHH-------hCCCEEEE-CCCCCCHHH----HHHHHHcCCCEEEEC
No 220
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=22.46 E-value=2.4e+02 Score=28.82 Aligned_cols=117 Identities=15% Similarity=0.102 Sum_probs=67.1
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCc--cccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHHhhh-cCCCccccc
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPI--SFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAH-LGKNASKSA 406 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~--~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~-~~~~~~~~~ 406 (504)
..+.+.+.++|.+|.+|..+.+... .-.+..-.......+.. ++|.|||=-|+... ....+.. .+--....+
T Consensus 13 ~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~----~aDvVitmv~~~~~-V~~V~~g~~g~~~~~~~ 87 (286)
T COG2084 13 SPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAA----EADVVITMLPDDAA-VRAVLFGENGLLEGLKP 87 (286)
T ss_pred HHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHH----hCCEEEEecCCHHH-HHHHHhCccchhhcCCC
Confidence 4588899999999999988754211 00111111111122332 27888887666432 2222211 110001112
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeec----CCeEEEe
Q 010671 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK----DGVPFCL 454 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~----Dg~~v~~ 454 (504)
..++|=| +...|+-+....+.+.+.|..+++..|.=+. -|.+.++
T Consensus 88 G~i~IDm---STisp~~a~~~a~~~~~~G~~~lDAPVsGg~~~A~~GtLtim 136 (286)
T COG2084 88 GAIVIDM---STISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTIM 136 (286)
T ss_pred CCEEEEC---CCCCHHHHHHHHHHHHhcCCcEEecCccCCchhhhhCceEEE
Confidence 2244443 6788999999999999999999999987544 3445443
No 221
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=22.25 E-value=1.2e+02 Score=30.14 Aligned_cols=47 Identities=11% Similarity=0.135 Sum_probs=31.2
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHH-hhcCCCcccccccCCC
Q 010671 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSF-IDNGDFSVDGVLSDFP 385 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~-i~~G~~gVDGIiTD~P 385 (504)
+..+++.+|+.|++|.+|+--.- .++. .+.+.++ .+ .||||+-+|.-
T Consensus 68 p~~~i~~l~~~g~~~~~~~~P~v----~~w~---~~~~~~~~~~---~Gvdg~w~D~~ 115 (265)
T cd06589 68 PKSMIDELHDNGVKLVLWIDPYI----REWW---AEVVKKLLVS---LGVDGFWTDMG 115 (265)
T ss_pred HHHHHHHHHHCCCEEEEEeChhH----HHHH---HHHHHHhhcc---CCCCEEeccCC
Confidence 57899999999999999974211 0110 1234444 44 45999999963
No 222
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=22.23 E-value=3e+02 Score=27.30 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=53.4
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHH--HHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccc
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYL--SFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSAN 407 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~--~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~ 407 (504)
...++.+++++ +|++++..... +.+++. +|.. +|...+..+.+...... ... ..+..-
T Consensus 119 ~~~~~~i~~a~-~I~i~G~G~s~---------~~A~~~~~~l~~---~g~~~~~~~d~~~~~~~---~~~----~~~~Dv 178 (278)
T PRK11557 119 HECVTMLRSAR-RIILTGIGASG---------LVAQNFAWKLMK---IGINAVAERDMHALLAT---VQA----LSPDDL 178 (278)
T ss_pred HHHHHHHhcCC-eEEEEecChhH---------HHHHHHHHHHhh---CCCeEEEcCChHHHHHH---HHh----CCCCCE
Confidence 34677777776 69999887541 223322 2333 34766654443322222 222 123345
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010671 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
.++|+++| ..+.++.+.+.|.+.|+..|-+
T Consensus 179 ~I~iS~sg----~~~~~~~~~~~ak~~ga~iI~I 208 (278)
T PRK11557 179 LLAISYSG----ERRELNLAADEALRVGAKVLAI 208 (278)
T ss_pred EEEEcCCC----CCHHHHHHHHHHHHcCCCEEEE
Confidence 67788877 4677999999999999988765
No 223
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=22.07 E-value=4.9e+02 Score=24.89 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=54.8
Q ss_pred HHHHHHHHHc-CCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCC-----CCChHHHHHHhhhc--CCC
Q 010671 330 TTIVLDAHKE-RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF-----PLTPSAAVDCFAHL--GKN 401 (504)
Q Consensus 330 ~~lV~~ahk~-Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~-----P~~~~~~l~~~~~~--~~~ 401 (504)
.++++.+.+. +++|.+..-= ...+...++++.| +|.|+... |+.+.++.+.+... -.+
T Consensus 62 ~~~i~~i~~~~~~pv~~~GgI-----------~~~e~~~~~~~~G---ad~vvigs~~l~dp~~~~~i~~~~g~~~i~~s 127 (234)
T cd04732 62 LELIEEIVKAVGIPVQVGGGI-----------RSLEDIERLLDLG---VSRVIIGTAAVKNPELVKELLKEYGGERIVVG 127 (234)
T ss_pred HHHHHHHHHhcCCCEEEeCCc-----------CCHHHHHHHHHcC---CCEEEECchHHhChHHHHHHHHHcCCceEEEE
Confidence 4566666554 5776665321 1235677777665 99988654 44444444433210 000
Q ss_pred cccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCe
Q 010671 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGV 450 (504)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~ 450 (504)
-.-... . +..||.....+.+.....+...+.|++.+=+ ..++++|.
T Consensus 128 id~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ga~~iii-~~~~~~g~ 173 (234)
T cd04732 128 LDAKDG-K-VATKGWLETSEVSLEELAKRFEELGVKAIIY-TDISRDGT 173 (234)
T ss_pred EEeeCC-E-EEECCCeeecCCCHHHHHHHHHHcCCCEEEE-EeecCCCc
Confidence 000000 1 2234544455777777777788889987744 22445554
No 224
>PF11814 DUF3335: Peptidase_C39 like family; InterPro: IPR021770 This family of proteins are functionally uncharacterised. This family is only found in bacteria. This presumed domain is typically between 226 to 230 amino acids in length.
Probab=22.05 E-value=4.2e+02 Score=25.76 Aligned_cols=45 Identities=11% Similarity=0.019 Sum_probs=28.3
Q ss_pred CCCchHHHHHHHHHcCCCEEEee-------------e-eeecCCeEEEecCcCcccccC
Q 010671 420 YPSCTNLAYQKAISDGVDFIDCP-------------V-QMSKDGVPFCLSFINLINSTN 464 (504)
Q Consensus 420 ~penT~~a~~~a~~~g~~~iE~D-------------v-~~t~Dg~~v~~Hd~~l~r~t~ 464 (504)
+-+-|+..++++++.|.-.|-+= | ---.|+..|.+||+.++....
T Consensus 114 ~~~~~~~~l~~~l~~G~~~lvLIS~y~~~g~k~PHWV~v~g~d~~~vyihDP~~d~~~~ 172 (207)
T PF11814_consen 114 YRPLSLADLRAALAAGAIVLVLISTYRMDGKKVPHWVVVTGVDDDFVYIHDPDVDAERG 172 (207)
T ss_pred cCCCCHHHHHHHHHCCCEEEEEEeecccCCCCCCeEEEEEEecCCEEEEeCCCCCcccC
Confidence 34456667777777765444321 1 123488999999999985443
No 225
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=21.98 E-value=4.7e+02 Score=26.04 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHH-HHHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccce
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e-~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (504)
..+++.+|+.|+.+.++....-....-.+..+...+ .+...+. |+|.|=|.++... +.++.+... ...|
T Consensus 129 ~~v~~~~~~~g~pl~vi~~~~g~~~e~~~~~~~i~~a~~~a~e~---GAD~vKt~~~~~~-~~l~~~~~~------~~ip 198 (267)
T PRK07226 129 GEVAEECEEWGMPLLAMMYPRGPGIKNEYDPEVVAHAARVAAEL---GADIVKTNYTGDP-ESFREVVEG------CPVP 198 (267)
T ss_pred HHHHHHHHHcCCcEEEEEecCCCccCCCccHHHHHHHHHHHHHH---CCCEEeeCCCCCH-HHHHHHHHh------CCCC
Confidence 457788999999999985321100001111111112 2334444 5999999987532 333332221 1134
Q ss_pred eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010671 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 409 ~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
+ .+=-|-+..-.+-.+.-+..+++.||+++-+
T Consensus 199 V-~a~GGi~~~~~~~~l~~v~~~~~aGA~Gis~ 230 (267)
T PRK07226 199 V-VIAGGPKTDTDREFLEMVRDAMEAGAAGVAV 230 (267)
T ss_pred E-EEEeCCCCCCHHHHHHHHHHHHHcCCcEEeh
Confidence 3 3333332222222344446678999986643
No 226
>PRK15452 putative protease; Provisional
Probab=21.64 E-value=76 Score=34.46 Aligned_cols=57 Identities=11% Similarity=0.061 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhh-cCCCcccccccCCCCChHHHHH
Q 010671 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFID-NGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~-~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
...|+.||++|.+||+- +|.-. .+ +....+..+++ .-++||||||.-.|..+.-+.+
T Consensus 49 ~eav~~ah~~g~kvyvt-~n~i~---~e---~el~~~~~~l~~l~~~gvDgvIV~d~G~l~~~ke 106 (443)
T PRK15452 49 ALGINEAHALGKKFYVV-VNIAP---HN---AKLKTFIRDLEPVIAMKPDALIMSDPGLIMMVRE 106 (443)
T ss_pred HHHHHHHHHcCCEEEEE-ecCcC---CH---HHHHHHHHHHHHHHhCCCCEEEEcCHHHHHHHHH
Confidence 46889999999999874 43211 00 11122222221 0134699999999987766554
No 227
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=21.35 E-value=3.1e+02 Score=23.19 Aligned_cols=62 Identities=18% Similarity=0.135 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCeEEEecCCC-C-CCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010671 330 TTIVLDAHKERLEVFASNFAN-D-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n-~-~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
.++...+..+|++|..-.+.+ . ....+.++....+|+..++.. .++|.|+.|.+-+.++.++
T Consensus 11 ~El~~L~~t~g~~vv~~~~q~~~~~~p~~~iG~GK~eei~~~~~~--~~~d~vvfd~~Lsp~Q~rN 74 (95)
T PF13167_consen 11 EELEELAETAGYEVVGTVVQKRRKPDPKTYIGSGKVEEIKELIEE--LDADLVVFDNELSPSQQRN 74 (95)
T ss_pred HHHHHHHHHCCCeEEEEEEecCCCCCcceeechhHHHHHHHHHhh--cCCCEEEECCCCCHHHHHH
Confidence 457777788898887655543 2 233344455668888888874 3799999999888877664
No 228
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.83 E-value=67 Score=34.56 Aligned_cols=18 Identities=39% Similarity=0.445 Sum_probs=16.6
Q ss_pred HHHHHHHHHcCCeEEEec
Q 010671 330 TTIVLDAHKERLEVFASN 347 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wT 347 (504)
..+|+.||++||+|++|-
T Consensus 118 a~~I~~AHkr~l~v~aWf 135 (418)
T COG1649 118 AFVIAEAHKRGLEVHAWF 135 (418)
T ss_pred HHHHHHHHhcCCeeeech
Confidence 679999999999999994
No 229
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=20.55 E-value=3.2e+02 Score=29.74 Aligned_cols=97 Identities=21% Similarity=0.183 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCeEE---EecCCCCCCccccCCCChHHHHHHHhhcCCCcccccc-cC-----CCCChHHHHHHhhhcCC
Q 010671 330 TTIVLDAHKERLEVF---ASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~---~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~~~~ 400 (504)
...|+.++++|+.|. ++|... . -..+| -.+-.+.+.+.| +|.|. .| .|..+.+.++.+.+.-
T Consensus 126 ~~~v~~ak~~G~~v~~~i~~t~~p-~-~~~~~---~~~~a~~l~~~G---ad~I~i~Dt~G~l~P~~v~~lv~alk~~~- 196 (448)
T PRK12331 126 ETAVKATKKAGGHAQVAISYTTSP-V-HTIDY---FVKLAKEMQEMG---ADSICIKDMAGILTPYVAYELVKRIKEAV- 196 (448)
T ss_pred HHHHHHHHHcCCeEEEEEEeecCC-C-CCHHH---HHHHHHHHHHcC---CCEEEEcCCCCCCCHHHHHHHHHHHHHhc-
Confidence 458999999999864 444431 1 00000 023345555554 88753 45 4666666666654321
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010671 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+ ...-+-+|-- .|.+..|++ +|++.|||+|++-|.
T Consensus 197 ---~-~pi~~H~Hnt-~GlA~AN~l----aAieaGad~vD~sv~ 231 (448)
T PRK12331 197 ---T-VPLEVHTHAT-SGIAEMTYL----KAIEAGADIIDTAIS 231 (448)
T ss_pred ---C-CeEEEEecCC-CCcHHHHHH----HHHHcCCCEEEeecc
Confidence 1 1122445543 355555555 678899999988776
No 230
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=20.19 E-value=8.5e+02 Score=24.09 Aligned_cols=138 Identities=14% Similarity=0.173 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhcCCceEec-CCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCc
Q 010671 237 MRSFVLSVSRSVVVNYISS-PEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKD 315 (504)
Q Consensus 237 ~~~~v~~~l~~~g~~~isS-fd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~ 315 (504)
....+.+..++.|+.+++| |+.+.+..+.+.. .+.+ .+ +++-
T Consensus 57 ~~~~L~~~~~~~gi~f~stpfd~~s~d~l~~~~----~~~~-KI---------------------------aS~d----- 99 (241)
T PF03102_consen 57 QHKELFEYCKELGIDFFSTPFDEESVDFLEELG----VPAY-KI---------------------------ASGD----- 99 (241)
T ss_dssp HHHHHHHHHHHTT-EEEEEE-SHHHHHHHHHHT-----SEE-EE----------------------------GGG-----
T ss_pred HHHHHHHHHHHcCCEEEECCCCHHHHHHHHHcC----CCEE-Ee---------------------------cccc-----
Confidence 3456678888899987644 8888888886652 2332 22 1100
Q ss_pred cccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHh-hcCCCccccc----ccCCCCChHH
Q 010671 316 YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFI-DNGDFSVDGV----LSDFPLTPSA 390 (504)
Q Consensus 316 ~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i-~~G~~gVDGI----iTD~P~~~~~ 390 (504)
..+..+++.+-+.|++|...|=.... +..++...++ ..| +.+-+ ++.||....+
T Consensus 100 -----------l~n~~lL~~~A~tgkPvIlSTG~stl--------~EI~~Av~~~~~~~--~~~l~llHC~s~YP~~~e~ 158 (241)
T PF03102_consen 100 -----------LTNLPLLEYIAKTGKPVILSTGMSTL--------EEIERAVEVLREAG--NEDLVLLHCVSSYPTPPED 158 (241)
T ss_dssp -----------TT-HHHHHHHHTT-S-EEEE-TT--H--------HHHHHHHHHHHHHC--T--EEEEEE-SSSS--GGG
T ss_pred -----------ccCHHHHHHHHHhCCcEEEECCCCCH--------HHHHHHHHHHHhcC--CCCEEEEecCCCCCCChHH
Confidence 01245777777888888888743220 1122233333 222 23332 4678876543
Q ss_pred H----HHHhhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeee
Q 010671 391 A----VDCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQM 445 (504)
Q Consensus 391 ~----l~~~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~ 445 (504)
+ +..+++. -+..| |.|..-...+. --.|+..||.+||-=+-+
T Consensus 159 ~NL~~i~~L~~~--------f~~~v---G~SDHt~g~~~--~~~AvalGA~vIEKHfTl 204 (241)
T PF03102_consen 159 VNLRVIPTLKER--------FGVPV---GYSDHTDGIEA--PIAAVALGARVIEKHFTL 204 (241)
T ss_dssp --TTHHHHHHHH--------STSEE---EEEE-SSSSHH--HHHHHHTT-SEEEEEB-S
T ss_pred cChHHHHHHHHh--------cCCCE---EeCCCCCCcHH--HHHHHHcCCeEEEEEEEC
Confidence 3 2222221 12223 56665555433 348999999999976554
No 231
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=20.13 E-value=2.3e+02 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=26.3
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeee
Q 010671 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQM 445 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~ 445 (504)
..|+|+.-||. .....++.|++.++|+|++++..
T Consensus 76 ~~p~I~T~R~~------~~~~~l~~a~~~~~d~vDIEl~~ 109 (229)
T PRK01261 76 DIDYIFTYRGV------DARKYYETAIDKMPPAVDLDINL 109 (229)
T ss_pred CCCEEEEEcCC------CHHHHHHHHHhhCCCEEEEEccc
Confidence 45889999975 12567888888889999988754
Done!