BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010673
(504 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CO78|GEM1_CRYNJ Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=GEM1 PE=3 SV=1
Length = 686
Score = 352 bits (902), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 294/534 (55%), Gaps = 55/534 (10%)
Query: 2 GPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKR 61
PIM++F+E+ET VECSA + V +VFY+AQKAVLHPTAPL+D E TLKP+C+ ALKR
Sbjct: 136 APIMREFKEVETVVECSALLPLNVSEVFYFAQKAVLHPTAPLYDSREHTLKPKCLEALKR 195
Query: 62 IFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDL------- 114
IF I D D DG LN ELN+FQ KCF+ PLQ E+ G+ +V+ V L
Sbjct: 196 IFTISDVDKDGLLNAHELNQFQQKCFSTPLQSQELDGILEIVRSYDPYAVQPLPSSSPNT 255
Query: 115 --------------------------GLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGD 148
G+T GFL+LH +FI++GR+ETTW VLRKFGYG+
Sbjct: 256 PLSRDSSYGQLHYFNNNVVPPSPPQEGITELGFLYLHTMFIQQGRMETTWTVLRKFGYGE 315
Query: 149 DLELRDDFLPVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208
L+LR+DFL + D SVEL+ +FL IF YD D DGA+ EL+DLF T+P
Sbjct: 316 SLDLREDFLAPKFDVPSDCSVELSPLGNQFLTDIFEAYDKDQDGALSQNELDDLFSTSPG 375
Query: 209 SPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPA------ 262
+PW + D T +G +TL+G++++W++ TLL+ R +L L Y+GY PA
Sbjct: 376 NPWLSQGFPDTTITDDMGRVTLQGWLAQWSMTTLLNHRTTLNYLAYLGYSSSPATDLPTP 435
Query: 263 AALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFS------ENYAPT 316
AL VTR R DR++++ RNVF C + G +GK++LL SF+ RPF Y PT
Sbjct: 436 TALHVTRPRKQDRRQRKVTRNVFLCYVLGATGSGKTSLLRSFVNRPFKGGEDGLGGYEPT 495
Query: 317 TGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKR 376
T VN V+ G +K L+LQE + +IL N + L D+ I+V+DSSD S+
Sbjct: 496 TKVLSVVNSVEME-GVEKYLVLQEFGSKYESEILRNSKRLDMADIIIYVHDSSDTNSFSY 554
Query: 377 TKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARV-TQELGIEPPIPVSMKS 435
L + S +P + +A+K DL + V + LG++ P+ VS +
Sbjct: 555 ISNLRQQY------SLDHIPSIFVATKSDLDLAQQRHEVQPDVYCRRLGLQAPMAVSSRL 608
Query: 436 KDLNNVFSRIIWAAEHPHLNIPETETGRNR--KRYRHLVNSSLVFVSVGAAVAV 487
L+N++ I A P ++P + +R R + L ++ A VAV
Sbjct: 609 GPLHNLWVAITRVALDPTSSLPRGPRSQMSPAQRIRVVARWGLAATTISAIVAV 662
>sp|P0CO79|GEM1_CRYNB Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=GEM1 PE=3 SV=1
Length = 686
Score = 352 bits (902), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 294/534 (55%), Gaps = 55/534 (10%)
Query: 2 GPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKR 61
PIM++F+E+ET VECSA + V +VFY+AQKAVLHPTAPL+D E TLKP+C+ ALKR
Sbjct: 136 APIMREFKEVETVVECSALLPLNVSEVFYFAQKAVLHPTAPLYDSREHTLKPKCLEALKR 195
Query: 62 IFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDL------- 114
IF I D D DG LN ELN+FQ KCF+ PLQ E+ G+ +V+ V L
Sbjct: 196 IFTISDVDKDGLLNAHELNQFQQKCFSTPLQSQELDGILEIVRSYDPYAVQPLPSSSPNT 255
Query: 115 --------------------------GLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGD 148
G+T GFL+LH +FI++GR+ETTW VLRKFGYG+
Sbjct: 256 PLSRDSSYGQLHYFNNNVVPPSPPQEGITELGFLYLHTMFIQQGRMETTWTVLRKFGYGE 315
Query: 149 DLELRDDFLPVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208
L+LR+DFL + D SVEL+ +FL IF YD D DGA+ EL+DLF T+P
Sbjct: 316 SLDLREDFLAPKFDVPSDCSVELSPLGNQFLTDIFEAYDKDQDGALSQNELDDLFSTSPG 375
Query: 209 SPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPA------ 262
+PW + D T +G +TL+G++++W++ TLL+ R +L L Y+GY PA
Sbjct: 376 NPWLSQGFPDTTITDDMGRVTLQGWLAQWSMTTLLNHRTTLNYLAYLGYSSSPATDLPTP 435
Query: 263 AALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFS------ENYAPT 316
AL VTR R DR++++ RNVF C + G +GK++LL SF+ RPF Y PT
Sbjct: 436 TALHVTRPRKQDRRQRKVTRNVFLCYVLGATGSGKTSLLRSFVNRPFKGGEDGLGGYEPT 495
Query: 317 TGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKR 376
T VN V+ G +K L+LQE + +IL N + L D+ I+V+DSSD S+
Sbjct: 496 TKVLSVVNSVEME-GVEKYLVLQEFGSKYESEILRNSKRLDMADIIIYVHDSSDTNSFSY 554
Query: 377 TKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARV-TQELGIEPPIPVSMKS 435
L + S +P + +A+K DL + V + LG++ P+ VS +
Sbjct: 555 ISNLRQQY------SLDHIPSIFVATKSDLDLAQQRHEVQPDVYCRRLGLQAPMAVSSRL 608
Query: 436 KDLNNVFSRIIWAAEHPHLNIPETETGRNR--KRYRHLVNSSLVFVSVGAAVAV 487
L+N++ I A P ++P + +R R + L ++ A VAV
Sbjct: 609 GPLHNLWVAITRVALDPTSSLPRGPRSQMSPAQRIRVVARWGLAATTISAIVAV 662
>sp|Q5ZM83|MIRO2_CHICK Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1
Length = 618
Score = 350 bits (898), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 283/508 (55%), Gaps = 32/508 (6%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +E+ L+P C RAL RI
Sbjct: 133 PIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F + D D + L+D ELN FQ CF PL P + VK VV + DGV D GLTL+GFL
Sbjct: 193 FNLSDQDNNQILSDDELNYFQKSCFGNPLAPQALEDVKMVVWKNTTDGVQDNGLTLNGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGY D+LEL DD+L +L P S EL +FL+ +
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYDDELELTDDYLYPQFRLPPGCSTELNHLGYQFLQRL 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D D DGA+ PAEL++ F P PW Y TT G L+L GF+ +W L+
Sbjct: 313 FEKHDKDQDGALSPAELQNFFSVFPCMPWGPELYNTVC-TTDKGLLSLHGFLCQWTLIAY 371
Query: 243 LDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD RH L L Y+GY AL VTR++ +D +K QT+RNVF C + G + AGK
Sbjct: 372 LDVRHCLECLGYLGYPILSEQDSQTQALTVTREKRIDLEKGQTQRNVFLCKVLGARGAGK 431
Query: 298 SALLNSFLERPF-SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEAL 356
SA L +FL R ++ +P Y +N V Q G +K LIL E+ E K +
Sbjct: 432 SAFLQAFLGRSLAAQRESPGEPSPYTINTV-QVNGQEKYLILHEVSAE----TQFTKPSD 486
Query: 357 ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDS 416
A+CDV +YD SD S+ + + + +PC+ +ASK DL + S
Sbjct: 487 AACDVACLIYDLSDPKSFSYCASIYKQHYMDSQ-----IPCVFVASKTDLPEASQQPGLS 541
Query: 417 -ARVTQELGIEPPIPVSMKSKDL--NNVFSRIIWAAEHPHLNIPETETGRNRKRYRHLVN 473
A + + PP S S+ +++++ AA PHLN E
Sbjct: 542 PAEFCYKHCLPPPFLFSCHSQGPPGTAIYTKLATAATFPHLNAVELGAA----------- 590
Query: 474 SSLVFVSVGAAV-AVVGLAAYRAYAARR 500
S + V++GAAV A+VG YR A +
Sbjct: 591 SFWLRVALGAAVTALVGFTLYRVLAKNK 618
Score = 39.3 bits (90), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 286 RCLLFGPQNAGKSALLNSFLERPFSENYAP----------TTGEQYAVNVVDQPGGNKKT 335
R LL G GK++L+ + + F E P T E+ ++VD +
Sbjct: 6 RILLLGEAQVGKTSLIMALVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSESEQTE 65
Query: 336 LILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGV 395
LQE +A +V VYD + E + ++ + + + G + G +
Sbjct: 66 DELQE--------------EIAKANVVCVVYDVTKEATIEKIRTKWIPMVNGGAEKGARI 111
Query: 396 PCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
P +L+ +K DL+ + + Q IE + S K+ K+++ +F A HP
Sbjct: 112 PIILVGNKSDLQMGSSMEVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHP 169
>sp|Q2HJF8|MIRO1_BOVIN Mitochondrial Rho GTPase 1 OS=Bos taurus GN=RHOT1 PE=2 SV=1
Length = 631
Score = 345 bits (885), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 208/512 (40%), Positives = 290/512 (56%), Gaps = 40/512 (7%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RI
Sbjct: 146 PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRI 205
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I D D DG LNDAELN FQ CFN PL P + VK VV++ DGV D GLTL GFL
Sbjct: 206 FKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHISDGVADGGLTLKGFL 265
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FLH LFI++GR ETTW VLR+FGY DDL+L ++L K+ PD + EL A FL+
Sbjct: 266 FLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQST 325
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D+D D A+ P EL+DLF P PW + T G +T +GF+S+W L T
Sbjct: 326 FDKHDLDRDCALSPDELKDLFKVFPYIPWG-PDVNNTVCTNEKGWITYQGFLSQWTLTTY 384
Query: 243 LDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G +N GK
Sbjct: 385 LDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGMKNCGK 444
Query: 298 SALLNSFLERPFSENYAPTTGEQ--YAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
S +L + L R + + YA+N V G +K L+L +I E + L+ E
Sbjct: 445 SGVLQALLGRNLTRQKKIRDDHKSYYAINTV-YVYGQEKYLLLHDISES---EFLTEAEI 500
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----KPYTM 411
L CDV VYD S+ S++ + + DS +PCL++A+K DL + Y++
Sbjct: 501 L--CDVVCLVYDVSNPKSFEYCARIF---KQHFMDS--RIPCLIVAAKSDLHEVKQEYSI 553
Query: 412 AVQDSARVTQELGIEPPIPVSMKSKDL--NNVFSRIIWAAEHPHLNIPETETGRNRKRYR 469
+ D R + + PP + + D ++F ++ A +PH+ + ++ R
Sbjct: 554 SPTDFCR---KHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHVTQADLKSSTFWLR-- 608
Query: 470 HLVNSSLVFVSVGAAV-AVVGLAAYRAYAARR 500
S GA V AV+G A Y+A +R
Sbjct: 609 ---------ASFGATVFAVLGFAMYKALLKQR 631
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 11/183 (6%)
Query: 271 RSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPG 330
R+ D KK R LL G GK++L+ S + F E P E+ + P
Sbjct: 10 RAADMKKD------VRILLVGEPRVGKTSLIMSLVSEEFPEE-VPPRAEEITIPADVTPE 62
Query: 331 GNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGED 390
++ E+ +++ + ++ +V VY ++++S + + + D
Sbjct: 63 RVPTHIVDYSEAEQSDEQL---HQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTD 119
Query: 391 SGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAA 449
+P +L+ +K DL Y+ + Q IE + S K+ K+++ +F A
Sbjct: 120 KDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAV 179
Query: 450 EHP 452
HP
Sbjct: 180 LHP 182
>sp|Q8IXI2|MIRO1_HUMAN Mitochondrial Rho GTPase 1 OS=Homo sapiens GN=RHOT1 PE=1 SV=2
Length = 618
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/512 (40%), Positives = 289/512 (56%), Gaps = 40/512 (7%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RI
Sbjct: 133 PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I D D DG LNDAELN FQ CFN PL P + VK VV++ DGV D GLTL GFL
Sbjct: 193 FKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHISDGVADSGLTLKGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FLH LFI++GR ETTW VLR+FGY DDL+L ++L K+ PD + EL A FL+
Sbjct: 253 FLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQST 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D+D D A+ P EL+DLF P PW + T G +T +GF+S+W L T
Sbjct: 313 FDKHDLDRDCALSPDELKDLFKVFPYIPWG-PDVNNTVCTNERGWITYQGFLSQWTLTTY 371
Query: 243 LDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G +N GK
Sbjct: 372 LDVQRCLEYLGYLGYSILTEQESQASAVTVTRDKKIDLQKKQTQRNVFRCNVIGVKNCGK 431
Query: 298 SALLNSFLERPFSENYAPTTGEQ--YAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
S +L + L R + YA+N V G +K L+L +I E + L+ E
Sbjct: 432 SGVLQALLGRNLMRQKKIREDHKSYYAINTV-YVYGQEKYLLLHDISE---SEFLTEAEI 487
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----KPYTM 411
+ CDV VYD S+ S++ + + DS +PCL++A+K DL + Y++
Sbjct: 488 I--CDVVCLVYDVSNPKSFEYCARIF---KQHFMDS--RIPCLIVAAKSDLHEVKQEYSI 540
Query: 412 AVQDSARVTQELGIEPPIPVSMKSKDL--NNVFSRIIWAAEHPHLNIPETETGRNRKRYR 469
+ D R + + PP + + D ++F ++ A +PH+ + ++ R
Sbjct: 541 SPTDFCR---KHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHVTQADLKSSTFWLR-- 595
Query: 470 HLVNSSLVFVSVGAAV-AVVGLAAYRAYAARR 500
S GA V AV+G A Y+A +R
Sbjct: 596 ---------ASFGATVFAVLGFAMYKALLKQR 618
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 5/168 (2%)
Query: 286 RCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG 345
R LL G GK++L+ S + F E P E+ + P ++ E+
Sbjct: 6 RILLVGEPRVGKTSLIMSLVSEEFPEE-VPPRAEEITIPADVTPERVPTHIVDYSEAEQS 64
Query: 346 VKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDD 405
+++ + ++ +V VY ++++S + + + D +P +L+ +K D
Sbjct: 65 DEQL---HQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSD 121
Query: 406 LKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
L Y+ + Q IE + S K+ K+++ +F A HP
Sbjct: 122 LVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHP 169
>sp|Q8BG51|MIRO1_MOUSE Mitochondrial Rho GTPase 1 OS=Mus musculus GN=Rhot1 PE=2 SV=1
Length = 631
Score = 342 bits (877), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/512 (40%), Positives = 288/512 (56%), Gaps = 40/512 (7%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RI
Sbjct: 146 PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRI 205
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I D D DG LNDAELN FQ CFN PL P + VK VV++ DGV D GLTL GFL
Sbjct: 206 FKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHLSDGVADSGLTLRGFL 265
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FLH LFI++GR ETTW VLR+FGY DDL+L ++L K+ PD + EL A FL+
Sbjct: 266 FLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQST 325
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D+D D A+ P EL+DLF P PW + T G +T +GF+S+W L T
Sbjct: 326 FDKHDLDRDCALSPDELKDLFQVFPYIPWG-PDVNNTVCTNERGWITYQGFLSQWTLTTY 384
Query: 243 LDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G + GK
Sbjct: 385 LDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGVKGCGK 444
Query: 298 SALLNSFLERPFSENYAPTTGEQ--YAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
+ +L S L R + YA+N V G +K L+L +I E + L+ E
Sbjct: 445 TGVLQSLLGRNLMRQKKIRDDHKSYYAINTV-YVYGQEKYLLLHDISE---SEFLTEAET 500
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----KPYTM 411
+ CDV VYD ++ S++ + + DS +PCL++A+K DL + +++
Sbjct: 501 I--CDVVCLVYDVTNPKSFEYCARIF---KQHFMDS--RIPCLIVAAKSDLHEVKQEHSI 553
Query: 412 AVQDSARVTQELGIEPPIPVSMKSKDL--NNVFSRIIWAAEHPHLNIPETETGRNRKRYR 469
+ D R + + PP + + D ++F ++ A +PH+ + ++ R
Sbjct: 554 SPTDFCR---KHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHVTQADLKSSTFWLR-- 608
Query: 470 HLVNSSLVFVSVGAAV-AVVGLAAYRAYAARR 500
S GA V AVVG A YRA +R
Sbjct: 609 ---------ASFGATVFAVVGFAMYRALLKQR 631
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 11/190 (5%)
Query: 264 ALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAV 323
A RV R+ D KK R LL G GK++L+ S + F E P E+ +
Sbjct: 3 AGRVRPLRASDMKKD------VRILLVGEPRVGKTSLIMSLVSEEFPEE-VPPRAEEITI 55
Query: 324 NVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVE 383
P ++ E+ +++ + ++ +V VY ++++S + +
Sbjct: 56 PADVTPERVPTHIVDYSEAEQSDEQL---HQEISQANVICIVYAVNNKHSIDKVTSRWIP 112
Query: 384 VARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVF 442
+ D +P +L+ +K DL Y+ + Q IE + S K+ K+++ +F
Sbjct: 113 LINERTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELF 172
Query: 443 SRIIWAAEHP 452
A HP
Sbjct: 173 YYAQKAVLHP 182
>sp|Q5ZM73|MIRO1_CHICK Mitochondrial Rho GTPase 1 OS=Gallus gallus GN=RHOT1 PE=2 SV=1
Length = 619
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 205/510 (40%), Positives = 284/510 (55%), Gaps = 35/510 (6%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM Q+ EIETCVECSA + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RI
Sbjct: 133 PIMNQYTEIETCVECSAKNLKNRSELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I D D DG LNDAELN FQ CFN PL P + VK VV++ DGV D GLTL GFL
Sbjct: 193 FRISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKNVSDGVADNGLTLKGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FLH LFI++GR ETTW VLR+FGY DDLEL ++L K+ PD + EL A FL+ I
Sbjct: 253 FLHTLFIQRGRHETTWTVLRRFGYDDDLELTPEYLFPLLKIPPDCTTELNHHAYLFLQSI 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D+D D A+ P EL+DLF P PW G +T +GF+S+W L T
Sbjct: 313 FDKHDLDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNGKGGWITYQGFLSQWTLTTY 372
Query: 243 LDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G + GK
Sbjct: 373 LDVQRCLEYLGYLGYSILAEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVVGMKGCGK 432
Query: 298 SALLNSFLERPFSENYAPTTGEQ--YAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
S +L + L R + YA+N V G +K L+L ++ + + L++ E
Sbjct: 433 SGVLQALLGRNLMRQRQIRAEHKSYYAINTV-YVYGQEKYLLLHDVSD---SEFLTDAET 488
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLG-EDSGYGVPCLLIASKDDLKPYTMAVQ 414
+ CDV VYD S+ S+ E V + + DS +PCL++A+K DL
Sbjct: 489 I--CDVVCLVYDVSNPKSF----EYCVRIFKQHFMDS--RIPCLVVAAKSDLHEVRQEYS 540
Query: 415 DS-ARVTQELGIEPPIPVSMKSKDL--NNVFSRIIWAAEHPHLNIPETETGRNRKRYRHL 471
S A ++ + PP + + D+ ++F ++ A +PH+ + ++ R
Sbjct: 541 ISPAEFCKKHKMPPPQAFTCNTVDMPSKDIFVKLTTMAMYPHVTQADLKSSTFWLR---- 596
Query: 472 VNSSLVFVSVGAAV-AVVGLAAYRAYAARR 500
S GA V A +G A Y+A +R
Sbjct: 597 -------ASFGATVFAFLGFAMYKALIKQR 619
>sp|Q6NVC5|MIRO1_DANRE Mitochondrial Rho GTPase 1-A OS=Danio rerio GN=rhot1a PE=2 SV=1
Length = 619
Score = 337 bits (865), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 288/517 (55%), Gaps = 49/517 (9%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RI
Sbjct: 133 PIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYSPEEKEMKPSCIKALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I D D DG LND ELN FQ CFN PL P + VK VV++ DGV D GLTL GFL
Sbjct: 193 FKISDLDNDGILNDNELNFFQRTCFNIPLAPQALEDVKNVVRKNMTDGVKDNGLTLKGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FLH LFI++GR ETTW VLR+FGY DDLEL ++L K+ PD + EL A FL+ +
Sbjct: 253 FLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLFKIPPDCTTELNHNAYLFLQSV 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D D D A+ P EL+DLF P PW + T G +T +G++S+W L T
Sbjct: 313 FDKHDKDRDCALSPDELKDLFKVFPYMPWG-PDVNNTVCTNEQGWITYQGYLSQWTLTTY 371
Query: 243 LDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD + L L Y+GY AAA+ VTR + +D +K+QT+R+VFRC + G + GK
Sbjct: 372 LDVQRCLEYLGYLGYSIIQEQESQAAAITVTRNKRIDLQKKQTQRSVFRCNVLGARGCGK 431
Query: 298 SALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
S L +FL R + YA++ G K L+ + +P+ + LS EA
Sbjct: 432 SGFLQAFLGRNLVRQKRIREDHKSYYAISTTYVYGQEKYLLLHEVLPD---VEFLS--EA 486
Query: 356 LASCDVTIFVYDSSD----EYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----K 407
+CDV VYD S+ EY K K+ ++ PC++IA+K DL +
Sbjct: 487 DLACDVVCLVYDISNPRSFEYCAKVYKKHFMDSK---------TPCVIIAAKSDLHEARQ 537
Query: 408 PYTMAVQDSARVTQELGIEPPIPVSMKSKDL--NNVFSRIIWAAEHPHLNIPETETGRNR 465
Y+++ D R + + PP + + + ++++++ A +PH+ +
Sbjct: 538 YYSLSPLDFCR---KHKLHPPQLFTCNTTEAPSKDLYTKLTTMAMYPHMTQAD------- 587
Query: 466 KRYRHLVNSSLVF-VSVGAAV-AVVGLAAYRAYAARR 500
L NS+ SVGA V AV+G A Y+A +R
Sbjct: 588 -----LKNSTFWLRASVGATVFAVLGFAMYKALLKQR 619
>sp|Q6DIS1|MIRO2_XENTR Mitochondrial Rho GTPase 2 OS=Xenopus tropicalis GN=rhot2 PE=2 SV=1
Length = 616
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 206/515 (40%), Positives = 281/515 (54%), Gaps = 58/515 (11%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + +VFYYAQKAVLHPTAPL+D +E+ L+P+C +AL RI
Sbjct: 133 PIMNQFSEIETCVECSAKNLKNISEVFYYAQKAVLHPTAPLYDPEEKQLRPQCKKALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I + D + L+D ELN FQ CF PL P + VK VV++ DGV D GLTL+GFL
Sbjct: 193 FTISEQDNNQILSDEELNFFQQSCFGNPLAPQALEDVKMVVKKNTADGVRDNGLTLNGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGY D LEL DD+L P ++ + S EL +FL+
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYDDALELTDDYLYPPLRIPHESSTELNHFGYQFLQKA 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGN-LTLKGFVSKWALMT 241
F +D+D DGA+ P+EL+ F P +PW P + TA G L L G++ +W L+
Sbjct: 313 FEKHDLDEDGALSPSELQSFFSVFPYTPW--GPELASTVCTAQGGYLPLHGYLCQWTLVA 370
Query: 242 LLDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAG 296
LD L +L Y+GY A+ VTR++S+D +K QT+RNVF C + GP+ G
Sbjct: 371 YLDVHRCLEHLGYLGYPILCEQESQTHAITVTREKSIDLEKGQTQRNVFLCRVIGPRGTG 430
Query: 297 KSALLNSFLERPFSE----NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSN 352
KSA L +FL + E N P+ Y+VN V GG +K LIL E+ + + L
Sbjct: 431 KSAFLRAFLGQSLEEQQQSNKPPSF---YSVNTV-LVGGQEKYLILFEVDVD--TEFL-- 482
Query: 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA 412
K + A CDV +YD SD S+ + + + PCL + K
Sbjct: 483 KTSDAPCDVACLMYDVSDSKSFNYCASIYKQHYMESQ-----TPCLFVGCK--------- 528
Query: 413 VQDSARVTQELGIE-----------PPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETET 461
D V Q+ GI PP + + ++S++ AA PHL+ E T
Sbjct: 529 -YDQGEVKQQHGISPAEFCHKHRLPPPYHFTCQGTPDRTIYSKLATAAAFPHLHDTELST 587
Query: 462 GRNRKRYRHLVNSSLVFVSVGAAV-AVVGLAAYRA 495
S + V++GA V AVVG Y+A
Sbjct: 588 A-----------SFWLRVALGATVAAVVGFTLYKA 611
>sp|Q5E9M9|MIRO2_BOVIN Mitochondrial Rho GTPase 2 OS=Bos taurus GN=RHOT2 PE=2 SV=1
Length = 618
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/411 (44%), Positives = 243/411 (59%), Gaps = 22/411 (5%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RI
Sbjct: 133 PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F + D DMD AL+D ELN FQ CF PL P + VK VV + GV D LTL GFL
Sbjct: 193 FRLSDQDMDQALSDQELNAFQTSCFGHPLAPQALEDVKMVVSKNVVGGVRDDQLTLDGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGYGD LEL D+L P ++ P S EL +F++ +
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYGDSLELTADYLCPPLRVPPGCSAELNHRGYQFVQRM 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D D DGA+ PAEL+ LF P +PW P+ + T G L L G++ +W L+T
Sbjct: 313 FEKHDQDRDGALSPAELQSLFSVFPAAPW--GPHLPSTVRTKAGRLPLHGYLCQWTLVTY 370
Query: 243 LDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD R SL +L Y+GY A A+ VTR++ +D++K QT+RNV C + G + GK
Sbjct: 371 LDVRRSLEHLGYLGYPTLCEQDSQAHAITVTREKRLDQEKGQTQRNVLLCKVVGARGVGK 430
Query: 298 SALLNSFLERPFSENYAPTTGEQ--YAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
S+ L +FL A GE YA++ V Q G +K LIL E+ + L A
Sbjct: 431 SSFLRAFLGHSLGHQDA---GEPSVYAIDTV-QVNGQEKYLILCEVAADS----LLTASA 482
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL 406
ASCDV ++D SD S+ + + G+ PCL + SK DL
Sbjct: 483 DASCDVACLMFDGSDLRSFALCASVYKQHYMDGQ-----TPCLFVCSKADL 528
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQE 340
+R+V R LL G GK++L+ S + F E P E+ + P ++
Sbjct: 2 KRDV-RILLLGEAQVGKTSLILSLVGEEFPEE-VPARAEEITIPADVTPEKVPTHIVDYS 59
Query: 341 IPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLI 400
E+ V+++ + + DV VYD S+E + ++ + + + G VP +L+
Sbjct: 60 ETEQTVEEL---QGEIDKADVVCVVYDVSEEATVEKIRTKWIPLVNGDTKRGPRVPIILV 116
Query: 401 ASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
+K DL+P ++Q IE + S K+ K+++ +F A HP
Sbjct: 117 GNKSDLRPGGSMEAVLPIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHP 169
>sp|Q4PB75|GEM1_USTMA Mitochondrial Rho GTPase 1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=GEM1 PE=3 SV=1
Length = 752
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 183/473 (38%), Positives = 263/473 (55%), Gaps = 73/473 (15%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
+ P+M +F+E+ETCVECSA + V +VFY+AQKAVL+PTAPL+D E LKP CV ALK
Sbjct: 133 LAPVMAEFKEVETCVECSARIPLNVSEVFYFAQKAVLYPTAPLYDSREHVLKPACVDALK 192
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQE--------------- 105
RIF +CD D DG L+D ELN+FQ KCF+ PLQ E+ G+K +V +
Sbjct: 193 RIFRLCDSDKDGLLSDGELNDFQRKCFDTPLQAQELEGIKDLVVQAPIAGLRYNHENSSV 252
Query: 106 ------------KQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELR 153
H + + LT++GFL+LH LFI++GRLETTW VLR FGYG DL L+
Sbjct: 253 AASGSSANGDIPSHHPHLREGSLTMAGFLYLHTLFIQRGRLETTWTVLRTFGYGVDLSLQ 312
Query: 154 DDFLPVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPES--PW 211
D F+ + P+ SVEL+ +FL IF ++D D DGA+ EL+ LF+TAP++ PW
Sbjct: 313 DSFVKPAFAVPPECSVELSPNGYQFLTDIFEVHDKDRDGALSEEELDSLFITAPDNRHPW 372
Query: 212 DEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGY-------------- 257
+ + T G +TL+G++++W++ TLLD R +LA L Y+GY
Sbjct: 373 QGTGFPTSTITDEHGAVTLQGWLAQWSMTTLLDHRTTLAYLAYLGYPSFPLSGSSGSAST 432
Query: 258 ------------GGDPA-----------AALRVTRKRSVDRKKQ-QTERNVFRCLLFGPQ 293
G P+ AL++TR R D+KK+ +R+VF + G
Sbjct: 433 PAPIPLTPTGPPGSRPSRNRTPCPPSTITALKLTRPRKTDKKKKGAIQRSVFLGFVLGAA 492
Query: 294 NAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNK 353
+GK+A+L + + + F+ Y PT V+ V+Q G ++ L+LQE ++L N
Sbjct: 493 GSGKTAILRNMVGKRFANAYEPTQKMMSVVSTVEQ-AGAERYLVLQEFGSRYEAEVLRNT 551
Query: 354 EALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL 406
L++ DV +FVYDSSD S+ L + L +P L +A+K DL
Sbjct: 552 AKLSAADVIVFVYDSSDTNSFSYISNLRQQYPLL-----QSMPSLFVATKADL 599
>sp|Q32LU1|MIRO2_DANRE Mitochondrial Rho GTPase 2 OS=Danio rerio GN=rhot2 PE=2 SV=1
Length = 617
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 204/517 (39%), Positives = 288/517 (55%), Gaps = 51/517 (9%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +++ LK +CVRAL RI
Sbjct: 133 PIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEDKQLKAQCVRALSRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F I D D D L+DAELN FQ CF PL P + VK VV + DGV D GLTL+GFL
Sbjct: 193 FSISDQDNDHILSDAELNCFQKLCFGNPLAPQALEDVKTVVWKNTSDGVQDNGLTLNGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LRKFGY D LEL DD+L ++S + EL +FL +
Sbjct: 253 FLNTLFIQRGRHETTWTILRKFGYDDTLELTDDYLYPVLRVSVGCTTELNHLGHQFLLKL 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F YD D D A+ PAEL++LF P PW Y + T ++ G++ +W L+
Sbjct: 313 FEKYDEDKDSALSPAELKNLFSVLPYMPWSSTVYSNIPLTDDC-YISQHGYLCQWMLLAY 371
Query: 243 LDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD L +L Y+GY +A+ VTR++++D +QT+R VF C + GP+ GK
Sbjct: 372 LDVHRCLEHLGYLGYPILMEQECQTSAITVTREKALDLDNRQTQRTVFLCKVIGPRGTGK 431
Query: 298 SALLNSFLERPFS-ENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEAL 356
+ L +FL+R + P YA+N V K LIL+E+ E + L K A
Sbjct: 432 TDFLRAFLQRSTERSDRDPGAPSIYAINTV-SIANQDKYLILEEVDVE--TEFL--KAAD 486
Query: 357 ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDS 416
A+CDV +YD SD S+ + + DS G+PC+++ SK DL
Sbjct: 487 AACDVACLMYDVSDPDSFNYCASIYKQHYM---DS--GIPCVVLGSKADL---------- 531
Query: 417 ARVTQELGIEP---------PIPV---SMKSKDLNNVFSRIIWAAEHPHLNIPETETGRN 464
V Q G+ P P P+ ++ + +++S++ WAA +PHLN + +
Sbjct: 532 VEVKQHHGMSPSEFCYKHRLPSPLHFSALLTHTHTHIYSKLTWAAMYPHLNGSDMSS--- 588
Query: 465 RKRYRHLVNSSLVFVSVGAAV-AVVGLAAYRAYAARR 500
S + V++GA + A++G A YRA++ +
Sbjct: 589 --------TSFWLRVTLGATIAAMLGFALYRAFSRHK 617
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 286 RCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG 345
R LL G GK++L+ S + F E P E+ + D T I+ E
Sbjct: 6 RILLLGEPKVGKTSLIMSLVGEEFPEQ-VPLRAEEITIPA-DVTPEKVPTHIVDYSENEQ 63
Query: 346 VKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDD 405
++L +E + +V VYD + E + + + + + G + G +P +L+ +K D
Sbjct: 64 TDEVL--REEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSD 121
Query: 406 LKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
L+ + + Q IE + S K+ K+++ +F A HP
Sbjct: 122 LRSGSSMETILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHP 169
>sp|Q8IXI1|MIRO2_HUMAN Mitochondrial Rho GTPase 2 OS=Homo sapiens GN=RHOT2 PE=1 SV=2
Length = 618
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/460 (40%), Positives = 257/460 (55%), Gaps = 21/460 (4%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RI
Sbjct: 133 PIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F + D D+D AL+D ELN FQ CF PL P + VK VV GV + LTL GFL
Sbjct: 193 FRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGY D LEL D+L + P S EL +F++ +
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYSDALELTADYLSPLIHVPPGCSTELNHLGYQFVQRV 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D D DGA+ P EL+ LF P +PW P T G L L G++ +W L+T
Sbjct: 313 FEKHDQDRDGALSPVELQSLFSVFPAAPW--GPELPRTVRTEAGRLPLHGYLCQWTLVTY 370
Query: 243 LDPRHSLANLIYVGYGG----DPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKS 298
LD R L +L Y+GY D A A+ VTR++ +D++K QT+R+V C + G + GKS
Sbjct: 371 LDVRSCLGHLGYLGYPTLCEQDQAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKS 430
Query: 299 ALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALAS 358
A L +FL R YA++ V Q G +K LIL E+ +G L A+
Sbjct: 431 AFLQAFLGRGLGHQDTREQPPGYAIDTV-QVNGQEKYLILCEVGTDG----LLATSLDAT 485
Query: 359 CDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ--DS 416
CDV ++D SD S+ + G+ PCL ++SK DL P +AV
Sbjct: 486 CDVACLMFDGSDPKSFAHCASVYKHHYMDGQ-----TPCLFVSSKADL-PEGVAVSGPSP 539
Query: 417 ARVTQELGIEPPIPVSMK--SKDLNNVFSRIIWAAEHPHL 454
A ++ + P+P S ++ +F+++ A PHL
Sbjct: 540 AEFCRKHRLPAPVPFSCAGPAEPSTTIFTQLATMAAFPHL 579
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEI 341
R R LL G GK++L+ S + F E P E+ + P ++
Sbjct: 2 RRDVRILLLGEAQVGKTSLILSLVGEEFPEE-VPPRAEEITIPADVTPEKVPTHIVDYSE 60
Query: 342 PEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIA 401
E+ +++ +E + +V VYD S+E + ++ + + + G G VP +L+
Sbjct: 61 AEQTDEEL---REEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVG 117
Query: 402 SKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
+K DL+ + ++Q IE + S K+ ++++ +F A HP
Sbjct: 118 NKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHP 169
>sp|Q298L5|MIRO_DROPS Mitochondrial Rho GTPase OS=Drosophila pseudoobscura pseudoobscura
GN=Miro PE=3 SV=1
Length = 649
Score = 318 bits (814), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/465 (38%), Positives = 266/465 (57%), Gaps = 29/465 (6%)
Query: 4 IMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIF 63
IM+ F EIE+CVECSA T+ + ++FYYAQKAVLHPT+PL+ ++Q L P C ++L RIF
Sbjct: 158 IMEDFPEIESCVECSAKTLHNISEMFYYAQKAVLHPTSPLYIMEDQELTPACKKSLVRIF 217
Query: 64 IICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF 123
ICD D D LND ELN FQ +CFN PLQP + VK V+Q+ DG+ + +TL GFLF
Sbjct: 218 KICDTDGDNLLNDYELNLFQRRCFNTPLQPQILDEVKAVIQKNVPDGIYNDAVTLKGFLF 277
Query: 124 LHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGIF 183
LH LFI++GR ETTWAVLR+FGY D LE+ ++L P K+ P S EL+ +FL +F
Sbjct: 278 LHCLFIQRGRNETTWAVLRRFGYNDQLEMCQEYLRPPLKIPPGSSTELSHRGQKFLISVF 337
Query: 184 GLYDIDNDGAVRPAELEDLFLTAPESPWDEAP-YKDAAETTALGNLTLKGFVSKWALMTL 242
YD D DGA+ P E + LF P SPW + + + G +TL G++ +W LMTL
Sbjct: 338 ERYDRDCDGALSPEEHKMLFSVCPSSPWSYSTDIRKSCPINDKGWVTLHGWLCRWTLMTL 397
Query: 243 LDPRHSLANLIYVGY----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKS 298
+D ++ L Y+G+ AA+ VTR+R +D K+Q+ R+V++C + GP +GK+
Sbjct: 398 IDVVKTMEYLAYLGFNVHENDSLLAAIHVTRERRIDLAKRQSSRSVYKCHVIGPNGSGKT 457
Query: 299 ALLNSFLERPFSENYAPTTGEQYAVNVVD-----QPGGNKKTLILQEIPEEGVKKILSNK 353
L FL + G+++ NVV Q G +K LIL++I L +
Sbjct: 458 GLCRGFL----VDEMQKLIGKEFKTNVVHCINSVQVYGQEKHLILRDIDVRHALDPLQPQ 513
Query: 354 EALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----KPY 409
E +CDV VYDSS+ S++ + ++ + +P +++ +K D+ + Y
Sbjct: 514 E--VNCDVACLVYDSSNPRSFEYVARIYIKYY-----AESKIPVMIVGTKCDMDERRQDY 566
Query: 410 TMAVQDSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEHPHL 454
M A + + PP S+++ +++++ A PHL
Sbjct: 567 LM---QPAEFCAKYKLLPPHLFSLRTNK-KELYTKLATMAAFPHL 607
>sp|Q8IMX7|MIRO_DROME Mitochondrial Rho GTPase OS=Drosophila melanogaster GN=Miro PE=1
SV=1
Length = 652
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 268/466 (57%), Gaps = 30/466 (6%)
Query: 4 IMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIF 63
IM+ + EIE+CVECSA ++ + ++FYYAQKAVLHPT+PL+ +EQ L C ++L RIF
Sbjct: 160 IMEDYPEIESCVECSAKSLHNISEMFYYAQKAVLHPTSPLYMMEEQELTSACKKSLVRIF 219
Query: 64 IICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF 123
ICD D D LND ELN FQ +CFN PLQP + VK V+Q+ DG+ + +TL GFLF
Sbjct: 220 KICDIDGDNLLNDYELNLFQRRCFNTPLQPQILDEVKAVIQKNVPDGIYNDAVTLKGFLF 279
Query: 124 LHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGIF 183
LH LFI++GR ETTWAVLR+FGY D LE+ ++L P K+ P S EL+ +FL +F
Sbjct: 280 LHCLFIQRGRNETTWAVLRRFGYNDQLEMCQEYLRPPLKIPPGSSTELSHRGQQFLIAVF 339
Query: 184 GLYDIDNDGAVRPAELEDLFLTAPESPWDEAP--YKDAAETTALGNLTLKGFVSKWALMT 241
YD D DGA+ P E + LF T P +PW + K G +TL G++ +W LMT
Sbjct: 340 ERYDRDGDGALSPEEHKMLFSTCPAAPWSYSTDIRKSCPINETTGWVTLHGWLCRWTLMT 399
Query: 242 LLDPRHSLANLIYVGY----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
L+D ++ L Y+G+ AA+ VTR+R +D K+Q+ R+V++C + GP+ +GK
Sbjct: 400 LIDVVKTMEYLAYLGFNVHENDSQLAAIHVTRERRIDLAKRQSSRSVYKCHVIGPKGSGK 459
Query: 298 SALLNSFLERPFSENYAPTTGEQYAVNVVD-----QPGGNKKTLILQEIPEEGVKKILSN 352
+ + FL E+ G+++ NVV+ Q G +K LIL++I L
Sbjct: 460 TGMCRGFL----VEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILRDIDVRHALDPLQP 515
Query: 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----KP 408
+E +CDV VYDSS+ S++ + ++ + +P +++ +K D+ +
Sbjct: 516 QE--VNCDVACLVYDSSNPRSFEYVARIYIKYY-----AESKIPVMIVGTKCDMDERRQD 568
Query: 409 YTMAVQDSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEHPHL 454
Y M + + + PP S+K+ +++++ A PHL
Sbjct: 569 YLM---QPSEFCDKYKLLPPHLFSLKTNK-KELYTKLATMAAFPHL 610
>sp|Q7TSA0|MIRO2_RAT Mitochondrial Rho GTPase 2 OS=Rattus norvegicus GN=Rhot2 PE=2 SV=1
Length = 622
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 262/468 (55%), Gaps = 33/468 (7%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RI
Sbjct: 133 PIMSQFPEIETCVECSAKHLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F + D D+D AL+D ELN FQ CF PL P + VKRVV + GV D LTL GFL
Sbjct: 193 FRLSDQDLDHALSDKELNAFQKSCFGHPLAPQALEDVKRVVCKNVAGGVQDDRLTLEGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGY D LEL D+L P + P S EL +F++ +
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYSDSLELTPDYLCPPLYVPPGCSTELNHRGYQFVQRV 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D D+DG + P ELE LF +PW P T G L+L+G++ +W L+T
Sbjct: 313 FEKHDQDHDGVLSPTELESLFSVFSVAPW--GPELLHTVPTEAGCLSLRGYLCQWTLVTY 370
Query: 243 LDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD +H LA+L Y+GY A A+ VTR++ +D++K QT+R+V C + G + GK
Sbjct: 371 LDVQHCLAHLGYLGYPTLCEQDSQAQAITVTREKRLDQEKGQTQRSVLMCKVLGARGVGK 430
Query: 298 SALLNSFLERPFSENY---APTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKE 354
SA L +FL E AP + +N V + G +K LIL E+ + L +
Sbjct: 431 SAFLQAFLGHSLGEARDRDAPEKLPTHTINTV-RVSGQEKYLILCEVNADS----LLDTS 485
Query: 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL----KPYT 410
+CDV ++DSSD ++ + + G+ PCL I+SK DL P
Sbjct: 486 LDTTCDVACLMFDSSDPETFVQCATIYKRYYMDGQ-----TPCLFISSKADLPEGVAPPG 540
Query: 411 MAVQDSARVTQELGIEPPIPVSMK----SKDLNNVFSRIIWAAEHPHL 454
++ + R + P P S ++ +VF+++ A PHL
Sbjct: 541 LSPAEFCRRHRL-----PAPASFSCLGPAQSSIDVFTQLATMATFPHL 583
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEI 341
R R LL G GK++L+ S + F E P E+ + P +++
Sbjct: 2 RRDVRILLLGEAQVGKTSLILSLVGEEFPEE-VPARAEEITIPADVTP---------EKV 51
Query: 342 PEEGV------KKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGV 395
P V + +E + +V VYD S+E + ++ + + + +G +
Sbjct: 52 PTHIVDYSEAEQTEEELQEEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGRTATGPRL 111
Query: 396 PCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
P +L+ +K DL+P + ++Q IE + S K ++++ +F A HP
Sbjct: 112 PIILVGNKSDLRPGSTIEAVLPIMSQFPEIETCVECSAKHLRNISELFYYAQKAVLHP 169
>sp|Q8JZN7|MIRO2_MOUSE Mitochondrial Rho GTPase 2 OS=Mus musculus GN=Rhot2 PE=2 SV=1
Length = 620
Score = 305 bits (780), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 237/411 (57%), Gaps = 20/411 (4%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RI
Sbjct: 133 PIMSQFPEIETCVECSAKHLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F + D D D L+D ELN FQ CF PL P + VKRVV + GV + LTL GFL
Sbjct: 193 FRLSDQDRDHGLSDEELNAFQKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGY D LEL D+L + P S EL +F++ +
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRM 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F +D D+DG + P EL++LF +PW P T G L L G++ +W LMT
Sbjct: 313 FEKHDQDHDGVLSPTELQNLFSVFSGAPW--GPELLHTVPTQAGCLPLHGYLCQWTLMTY 370
Query: 243 LDPRHSLANLIYVGY-----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGK 297
LD + LA+L Y+GY A A+ VTR++ +D++K QT+R+V C + G + GK
Sbjct: 371 LDVQQCLAHLGYLGYPTLCEQDSQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGK 430
Query: 298 SALLNSFLERPFSENYAPTTGEQYAVNVVD--QPGGNKKTLILQEIPEEGVKKILSNKEA 355
SA L +FL E P E++ ++ ++ + G +K LIL E+ + L +
Sbjct: 431 SAFLQAFLGNSLGEARDPP--EKFPLHTINTVRVNGQEKYLILCEVNADS----LLDTSL 484
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL 406
+CDV ++DSSD ++ + G+ PCL IASK DL
Sbjct: 485 DTTCDVACLMFDSSDPKTFVHCATIYKRYYMDGQ-----TPCLFIASKADL 530
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEI 341
R R LL G GK++L+ S + F E P E+ + P +++
Sbjct: 2 RRDVRILLLGEAQVGKTSLILSLVGEEFPEE-VPARAEEITIPADVTP---------EKV 51
Query: 342 PEEGV------KKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGV 395
P V + +E + +V VYD S+E + ++ + + + +G +
Sbjct: 52 PTHIVDYSEAEQTEEELQEEIHKANVVCVVYDVSEETTIEKIRTKWIPLVNGRTATGPRL 111
Query: 396 PCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
P +L+ +K DL+P + ++Q IE + S K ++++ +F A HP
Sbjct: 112 PIILVGNKSDLRPGSTMEAVLPIMSQFPEIETCVECSAKHLRNISELFYYAQKAVLHP 169
>sp|Q4WN24|GEM1_ASPFU Mitochondrial Rho GTPase 1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=gem1 PE=3
SV=1
Length = 632
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 254/470 (54%), Gaps = 15/470 (3%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
M P+M +F+EI++C+ SA V + F+ QKAV HP APLFD E LKP V AL+
Sbjct: 133 MLPVMAEFKEIDSCIRTSAREHRNVNEAFFLCQKAVTHPIAPLFDSKESALKPAAVAALQ 192
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120
RIF + D D DG L+D E+ +FQ++CF+ PL ++V +K +Q+ D V G+ G
Sbjct: 193 RIFYLSDKDRDGYLSDKEIEDFQMRCFDKPLSKEDLVHIKETIQKTHPDSVTPFGIDCRG 252
Query: 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLR 180
F+ L+ ++ EKGR ET W +LR F Y D+L L++ FL ++ P S EL+ E F
Sbjct: 253 FIHLNKMYAEKGRHETVWIILRAFQYTDNLSLQESFLHPRFEVPPFASAELSPEGYRFFV 312
Query: 181 GIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWA 238
+F L D DNDG + AEL LF P P W + + + G++TL+G++++W+
Sbjct: 313 NLFLLSDKDNDGGLNDAELASLFAPTPGLPASWADGSFPSSTVRNEAGHVTLQGWLAQWS 372
Query: 239 LMTLLDPRHSLANLIYVGYG----GDPA--AALRVTRKRSVDRKKQQTERNVFRCLLFGP 292
+ T P+ +L L Y+G+ +P+ AAL+VTR R ++ + RNV + G
Sbjct: 373 MTTFQSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKKRKRPGRVGRNVVLGHVLGA 432
Query: 293 QNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSN 352
+GKSALL++FL R FS Y PT + AVN V+ PGG + LIL E+ E + +
Sbjct: 433 PGSGKSALLDAFLARGFSHTYRPTIQPRTAVNTVELPGGKQCYLILDELGELEPAILENQ 492
Query: 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM- 411
+ L CDV ++ YDSSD S+ +L + L E +P + IA K DL T
Sbjct: 493 AKLLDQCDVIVYTYDSSDPDSFAYIPQLRSKYPHLEE-----LPSVFIALKADLDRTTQR 547
Query: 412 AVQDSARVTQELGI-EPPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETE 460
A T L + PP+ VS + VF I AA P P +E
Sbjct: 548 AEHQPHEYTAMLNMPSPPLHVSATWSSIQEVFVHIAEAAMEPSTAFPRSE 597
>sp|Q4I2W2|GEM1_GIBZE Mitochondrial Rho GTPase 1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=GEM1 PE=3 SV=1
Length = 627
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 273/509 (53%), Gaps = 25/509 (4%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
P+M +FRE+++C+ SA V +VF+ QKAV HP APLFD+ E LKP C+ ALKRI
Sbjct: 134 PVMAEFREVDSCIRTSARDHRNVNEVFFLCQKAVTHPIAPLFDYKEGHLKPLCINALKRI 193
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F +CD D DG LN+ E+ +FQ +CF+ PL ++ +K + + + G+ L GFL
Sbjct: 194 FYLCDKDQDGYLNEQEMRDFQARCFDKPLTTDDLDNIKLSIAKSLPASDLEKGIDLPGFL 253
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
L+ L+ EKGR ET W +LRKF Y D L L D F+ ++ S EL+ F +
Sbjct: 254 QLNKLYAEKGRHETIWIILRKFHYTDSLSLEDKFIRPKFEVPEYSSAELSPAGYRFFVDL 313
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALM 240
F ++D DNDG + ELE LF AP P W ++ + + G++TL+G++++W++
Sbjct: 314 FLIFDKDNDGGLNDEELEALFAPAPGLPSSWTDSSFPSSTVRNEAGHVTLQGWLAQWSMT 373
Query: 241 TLLDPRHSLANLIYVGY-GGDP----AAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNA 295
T ++P+ ++ L Y+G+ +P AAL++T+ R + + ERNV C + G A
Sbjct: 374 TFIEPKTTIEYLAYLGFEPSNPKDSITAALKITKPRKRRSRLGRVERNVVLCYVLGASGA 433
Query: 296 GKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEA 355
GKSALL+SFL RPF Y PT + AVN V+ PGG K+ ++ E E IL N+
Sbjct: 434 GKSALLDSFLNRPFYGLYHPTIKPRRAVNSVELPGG-KQVYLILEELGELEPAILENRAK 492
Query: 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ- 414
L +CD+ + YDSSD S+ +L + L E +P + A K D +
Sbjct: 493 LDACDLICYAYDSSDPDSFSHIVDLRKKYPHLDE-----LPSIYTALKADKDKTNQRCEL 547
Query: 415 DSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPET-ETGRNRKRYRHLVN 473
+ T L + P+ VS+ ++ +F AA P P + E G +R
Sbjct: 548 QPDQYTSSLSMSLPLHVSVTWGSISELFVAYADAATTPSTAFPRSNEEGPDR-------- 599
Query: 474 SSLVFVSVGAAVAVVGLAAYRAYAARRNS 502
+ +++++G A A G+AA + N+
Sbjct: 600 -TSLYIALG-ATACAGVAALTIWRRATNA 626
>sp|Q2UM43|GEM1_ASPOR Mitochondrial Rho GTPase 1 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=gem1 PE=3 SV=1
Length = 633
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 253/470 (53%), Gaps = 15/470 (3%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
M P+M +F+EI++C+ SA V + F+ QKAV HP APLFD E LKP V AL+
Sbjct: 133 MLPLMAEFKEIDSCIRTSAREHRNVNEAFFLCQKAVTHPIAPLFDSKESALKPAAVAALQ 192
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120
RIF + D D DG L+D EL +FQ++CF PL ++V +K +Q+ V G+ G
Sbjct: 193 RIFYLSDKDRDGYLSDKELEDFQMRCFEKPLSEEDLVHIKETIQKTHPTSVAPSGIDCRG 252
Query: 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLR 180
F+ L+ ++ EKGR ET W +LR F Y D+L L++ FL ++ P S EL+ E F
Sbjct: 253 FIHLNKMYAEKGRHETVWIILRAFQYTDNLSLQESFLHPRFEVPPYASAELSPEGYRFFV 312
Query: 181 GIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWA 238
+F L D DNDG + AEL LF P P W + + + G++TL+G++++W+
Sbjct: 313 NLFLLSDKDNDGGLNDAELASLFAPTPGLPASWADGSFPSSTVRNEAGHVTLQGWLAQWS 372
Query: 239 LMTLLDPRHSLANLIYVGYG----GDPA--AALRVTRKRSVDRKKQQTERNVFRCLLFGP 292
+ T P+ +L L Y+G+ +P+ AAL+VTR R ++ + RNV + GP
Sbjct: 373 MTTFTSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKRRKRPGRVGRNVVLGHVLGP 432
Query: 293 QNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSN 352
+GKSALL++FL R FS Y PT + AVN V+ PGG + LIL E+ E + +
Sbjct: 433 PGSGKSALLDAFLARGFSTTYHPTIQPRTAVNTVELPGGKQCYLILDELGELEPAILENQ 492
Query: 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM- 411
+ L CDV ++ YDSSD S+ EL + L E +P + +A K DL T
Sbjct: 493 VKLLDQCDVIVYTYDSSDPDSFAYIPELRSKYPHLEE-----LPSVFVALKADLDRTTQR 547
Query: 412 AVQDSARVTQELGI-EPPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETE 460
A T L + P+ VS+ + VF I AA P P +E
Sbjct: 548 AEYQPHEYTAMLNMPSSPLHVSVTWSSMQEVFVHIAEAAMEPSTAFPRSE 597
>sp|Q5B5L3|GEM1_EMENI Mitochondrial Rho GTPase 1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=gem1 PE=3
SV=1
Length = 634
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 251/470 (53%), Gaps = 15/470 (3%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
M P+M +F+EI++C+ SA V + F+ QKAV HP APLFD E LKP V AL+
Sbjct: 134 MLPLMSEFKEIDSCIRTSAREHRNVNEAFFLCQKAVTHPIAPLFDAKESALKPAAVAALQ 193
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120
RIF + D D DG L+D E+ +FQ++CF PL ++V +K +Q+ D V G+ G
Sbjct: 194 RIFYLSDKDRDGYLSDKEIKDFQMRCFEKPLSEEDLVHIKETIQKTHPDSVTPSGIDCRG 253
Query: 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLR 180
F+ L+ ++ EKGR ET W +LR F Y D L L++ +L ++ P S EL+ E F
Sbjct: 254 FIHLNKMYAEKGRHETVWIILRAFQYTDSLSLQESYLHPKFEVPPFASAELSPEGYRFFV 313
Query: 181 GIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWA 238
+F L D DNDG + AEL LF P P W + + G++TL+G++++W+
Sbjct: 314 NLFLLSDKDNDGGLNDAELASLFAPTPGLPPSWADGSFPSCTVRNEAGHVTLQGWLAQWS 373
Query: 239 LMTLLDPRHSLANLIYVGYG----GDPA--AALRVTRKRSVDRKKQQTERNVFRCLLFGP 292
+ T P+ +L L Y+G+ +P+ AAL+VTR R ++ + RNV + G
Sbjct: 374 MTTFTSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKRRKRPGRVGRNVVLGHIVGA 433
Query: 293 QNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSN 352
+GKSALL++FL R FS Y PT + AVN V+ PGG + LI+ E+ E + +
Sbjct: 434 PGSGKSALLDAFLSRGFSTTYHPTIQPRTAVNTVELPGGKQCYLIMDELGELEPAILENQ 493
Query: 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM- 411
+ L CDV ++ YDSSD S+ L + L E +P + IA K DL T
Sbjct: 494 AKLLDQCDVIVYTYDSSDPDSFAYIPALRAKYPHLEE-----LPSVYIALKADLDRTTQR 548
Query: 412 AVQDSARVTQELGIE-PPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETE 460
A T L + PP+ VS+ + VF I AA P P +E
Sbjct: 549 AEHQPHEYTALLNMPGPPLHVSVTWSSIQEVFVHIAEAAMEPSTAFPRSE 598
>sp|P39722|GEM1_YEAST Mitochondrial Rho GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GEM1 PE=1 SV=1
Length = 662
Score = 288 bits (737), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 272/522 (52%), Gaps = 32/522 (6%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PI+ +F+EI+TC++ SA T + FY Q+A+ HP +PLFD LKP V ALKRI
Sbjct: 150 PILMEFKEIDTCIKTSAKTQFDLNQAFYLCQRAITHPISPLFDAMVGELKPLAVMALKRI 209
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQE-KQHDG--------VND 113
F++ D + D L+D E+ Q KCFN + E+ +K ++ + +HD V
Sbjct: 210 FLLSDLNQDSYLDDNEILGLQKKCFNKSIDVNELNFIKDLLLDISKHDQEYINRKLYVPG 269
Query: 114 LGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPD-QSVELA 172
G+T GFL L+ ++ E+GR ETTWA+LR F Y D L + D L P + PD SVEL+
Sbjct: 270 KGITKDGFLVLNKIYAERGRHETTWAILRTFHYTDSLCINDKILH-PRLVVPDTSSVELS 328
Query: 173 SEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTL 230
+ FL IF +DIDNDG + EL LF P P W + + G +TL
Sbjct: 329 PKGYRFLVDIFLKFDIDNDGGLNNQELHRLFKCTPGLPKLWTSTNFPFSTVVNNKGCITL 388
Query: 231 KGFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQ------TERNV 284
+G++++W++ T L+ + A L+Y G+ D AL+VT+ R + R+ + +R V
Sbjct: 389 QGWLAQWSMTTFLNYSTTTAYLVYFGFQEDARLALQVTKPRKMRRRSGKLYRSNINDRKV 448
Query: 285 FRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 344
F C + G GKS+LL +FL R FSE Y+PT + AVN ++ GG + LILQE+ E+
Sbjct: 449 FNCFVIGKPCCGKSSLLEAFLGRSFSEEYSPTIKPRIAVNSLELKGGKQYYLILQELGEQ 508
Query: 345 GVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKD 404
IL NK+ L CDV YDSSD S+ LL + L + +P + +ASK
Sbjct: 509 EY-AILENKDKLKECDVICLTYDSSDPESFSYLVSLLDKFTHLQD-----LPLVFVASKA 562
Query: 405 DLKPYTMAVQ-DSARVTQELGIEPPIPVSMK-SKDLNNVFSRIIWAAEHPHLNIP--ETE 460
DL Q + EL + P+ +S + LN +F +I AA P N P E
Sbjct: 563 DLDKQQQRCQIQPDELADELFVNHPLHISSRWLSSLNELFIKITEAALDPGKNTPGLPEE 622
Query: 461 TGRNRKRYRHLVNSSLVFVSVGAAVAVVGLAAYRAYAARRNS 502
T YR ++L+F S VA+ + + + + S
Sbjct: 623 TAAKDVDYRQ---TALIFGSTVGFVALCSFTLMKLFKSSKFS 661
>sp|Q7RZA2|GEM1_NEUCR Mitochondrial Rho GTPase 1 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=gem-1 PE=3 SV=1
Length = 629
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 249/469 (53%), Gaps = 16/469 (3%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
M P+M +FREI++C+ SA V +VFY QKAV HP APLFD+ E LKP CV AL+
Sbjct: 133 MLPVMAEFREIDSCIRTSAKEQKNVIEVFYLCQKAVTHPIAPLFDYKEGQLKPACVDALR 192
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120
RIF + D D DG LND E+ +FQ K F+ PL ++ +K V + D GL L G
Sbjct: 193 RIFFLSDKDQDGYLNDQEMQDFQQKSFDKPLSQEDLDNIKLTVSKSVPSSSTDKGLDLRG 252
Query: 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLR 180
FL L+ L+ EKGR ET W +LRK+ Y D L L D FL + S EL+ F
Sbjct: 253 FLQLNKLYAEKGRHETIWIILRKYHYTDSLSLEDSFLHPRFDVPDYASAELSPAGYRFFM 312
Query: 181 GIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWA 238
+F +D DNDG + EL LF P P W E + G++TL+G++++W+
Sbjct: 313 DLFLTFDKDNDGGLNDRELAALFAPTPGLPHSWAETSFPSTTVRNEAGHITLQGWLAQWS 372
Query: 239 LMTLLDPRHSLANLIYVGYGGDPA-----AALRVTRKRSVDRKKQQTERNVFRCLLFGPQ 293
+ T L+P+ +L L Y+G+ A AAL++T+ R R+ + +RNV C + G
Sbjct: 373 MTTFLEPKTTLEYLAYLGFETPNARETTTAALKITKPRKRRRRPGRVDRNVVLCYILGSS 432
Query: 294 NAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNK 353
AGKS+LL+ FL RPF Y PT + AVN V+ GG K+ ++ E E IL N+
Sbjct: 433 GAGKSSLLDVFLNRPFDTLYHPTIKPRQAVNSVELQGG-KQCYLILEELGELEPAILENQ 491
Query: 354 EALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM-- 411
L +CD+ + YDSS+ S+ EL +L E +P + A K D T
Sbjct: 492 AKLDACDLICYAYDSSEPDSFSHIVELRKRYPQLDE-----LPAVYTALKADRDKTTQRS 546
Query: 412 AVQDSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETE 460
+Q A T L + P+ VS+ ++ +F + AA +P P +E
Sbjct: 547 ELQPDA-YTAALNMSAPLHVSVTWNSISELFVALAEAATNPSTAFPRSE 594
>sp|Q94263|MIRO_CAEEL Mitochondrial Rho GTPase OS=Caenorhabditis elegans GN=K08F11.5 PE=3
SV=1
Length = 625
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 277/516 (53%), Gaps = 58/516 (11%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM+ E+ETCVECSA TM V ++FYYAQKAV++PT PL+D D + L R +AL R+
Sbjct: 137 PIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRARKALIRV 196
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F ICD D DG L+D ELN+FQ CF PL + VKR V + DGV + L L+GFL
Sbjct: 197 FKICDRDNDGYLSDTELNDFQKLCFGIPLTSTALEDVKRAVSDGCPDGVANDSLMLAGFL 256
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
+LH LFIE+GR ETTWAVLRKFGY L+L +D+L + S EL+ E V+F+ +
Sbjct: 257 YLHLLFIERGRHETTWAVLRKFGYETSLKLSEDYLYPRITIPVGCSTELSPEGVQFVSAL 316
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTL 242
F YD D DG + P+EL++LF P P A ET G LT G+++ W + TL
Sbjct: 317 FEKYDEDKDGCLSPSELQNLFSVCP-VPVITKDNILALETNQRGWLTYNGYMAYWNMTTL 375
Query: 243 LDPRHSLANLIYVGY---------GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQ 293
++ + L Y+G+ G+ ++RVTR+R D + T+R VF+CL+ G +
Sbjct: 376 INLTQTFEQLAYLGFPVGRSGPGRAGNTLDSIRVTRERKKDLENHGTDRKVFQCLVVGAK 435
Query: 294 NAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD--QPGGNKKTLILQEIPEEGVKKILS 351
+AGK+ + S R ++ G +++ V++ + K L+L+E+ +LS
Sbjct: 436 DAGKTVFMQSLAGRGMAD--VAQIGRRHSPFVINRVRVKEESKYLLLREV------DVLS 487
Query: 352 NKEALA----SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGY--GVPCLLIASKDD 405
++AL S DV F+YD S+ S+ A + + Y PC++IA+K +
Sbjct: 488 PQDALGSGETSADVVAFLYDISNPDSFAF-------CATVYQKYFYRTKTPCVMIATKVE 540
Query: 406 LKPYTMAVQDSARVTQE---LGIEPPIPVSMKSKDLNN----VFSRIIWAAEHPHLNIPE 458
+ V V E E P P+ + ++ +F ++ A +PHL
Sbjct: 541 RE----EVDQRWEVPPEEFCRQFELPKPIKFSTGNIGQSSSPIFEQLAMMAVYPHL---- 592
Query: 459 TETGRNRKRYRHLVNSSLVF-VSVGAAVAVVGLAAY 493
+R +L +S+L+ ++ GA A+V LA +
Sbjct: 593 -------RRVFYLNDSNLLSKITFGA--AIVALAGF 619
>sp|Q623S8|MIRO_CAEBR Mitochondrial Rho GTPase OS=Caenorhabditis briggsae GN=CBG01740
PE=3 SV=3
Length = 637
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 277/524 (52%), Gaps = 74/524 (14%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM+ E+ETCVECSA TM V ++FYYAQKAV++PT PL+D D + L R +AL R+
Sbjct: 149 PIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPLYDADTKQLTDRAKKALIRV 208
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F ICD D DG L+D ELN+FQ CF PL + VKR V + DGV L L+GFL
Sbjct: 209 FKICDRDNDGYLSDTELNDFQKLCFGIPLTSTALEDVKRAVADGCPDGVASDALMLAGFL 268
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
+LH LFIE+GR ETTWAVLRKFGY L+L +++L + S EL+ E V+F+ +
Sbjct: 269 YLHLLFIERGRHETTWAVLRKFGYETSLKLAEEYLYPRITIPVGCSTELSPEGVQFVSAL 328
Query: 183 FGLYDIDNDGAVRPAELEDLF--LTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALM 240
F YD D DG + P+EL++LF +AP D A ET G LT G+++ W +
Sbjct: 329 FEKYDEDKDGCLSPSELQNLFSVCSAPVITKDNIL---ALETNQRGWLTYNGYMAYWNMT 385
Query: 241 TLLDPRHSLANLIYVGY---------GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFG 291
TL++ + L Y+G+ G+ ++RVTR+R D + T+R VF+CL+ G
Sbjct: 386 TLINLTQTFEQLAYLGFPVGRSGPGRAGNTLDSIRVTRERKKDLENHGTDRKVFQCLVVG 445
Query: 292 PQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD--QPGGNKKTLILQEIPEEGVKKI 349
++AGK+ + S R S+ G +++ V++ + K L+L+E+ +
Sbjct: 446 AKDAGKTVFMQSLAGRGMSD--VAQIGRRHSPFVINRVKVKEESKYLLLREV------DV 497
Query: 350 LSNKEALA----SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGY--GVPCLLIASK 403
LS ++AL S DV F+YD S+ S+ A + + Y PC++IA+K
Sbjct: 498 LSPQDALGSGETSADVVAFLYDVSNPDSFAF-------CATVYQKYFYRTKTPCVMIATK 550
Query: 404 DDLKPYTMAVQDSARVTQELGIEP---------PIPVSMKSKDLNN----VFSRIIWAAE 450
+ V Q I P P P+ S ++ +F ++ A
Sbjct: 551 ----------VEREEVDQRWEIPPEEFCKQFELPKPIKFSSSNIGQSNSPIFEQLAMMAV 600
Query: 451 HPHLNIPETETGRNRKRYRHLVNSSLVF-VSVGAAVAVVGLAAY 493
+PHL +R +L +S+L+ ++ GA A+V LA +
Sbjct: 601 YPHL-----------RRVFYLSDSNLLSKITFGA--AIVALAGF 631
>sp|Q6FIR8|GEM1_CANGA Mitochondrial Rho GTPase 1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=GEM1 PE=3
SV=1
Length = 649
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 251/469 (53%), Gaps = 26/469 (5%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PI+ F+E++TCV+ SA T V FY Q+++ +P +PLFD LKP V AL RI
Sbjct: 141 PILMAFKEVDTCVKASAKTHFDVNQSFYLCQRSISYPISPLFDAKVGDLKPSAVAALSRI 200
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDG--------VNDL 114
F + D D DG LND E+ + Q KCF + E+ +K + +
Sbjct: 201 FFLSDEDQDGFLNDNEIMDLQRKCFGKSIDLNELNFIKHTLSDLTSSEEYPSEILYCQGK 260
Query: 115 GLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQ-SVELAS 173
GLT GF+ L+ ++ EKGR ETTW +LR F Y D L + DD + P P+Q SVEL+S
Sbjct: 261 GLTKQGFIALNKIYTEKGRHETTWGILRAFNYTDSLSI-DDAVLFPKVNVPEQASVELSS 319
Query: 174 EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLK 231
+ FL IF +D DNDGA+ EL LF + P P W E + + A G +TL+
Sbjct: 320 KGYRFLVDIFIKFDSDNDGALNDTELHTLFRSTPGLPNLWLETNFPASTVVNAKGFVTLQ 379
Query: 232 GFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDR------KKQQTERNVF 285
G++++W + T LD + + A L+Y+G+ D A+++T+ R + R + T+R VF
Sbjct: 380 GWLAQWTMTTYLDYKITTAYLVYLGFQEDAKLAVQITKSRRMRRRQGRLYRSYVTDRKVF 439
Query: 286 RCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG 345
C + G +N+GKS+LL SFL R FSE Y+PT + AVN V+ G + LILQE E+
Sbjct: 440 NCFVVGKRNSGKSSLLESFLGRLFSEAYSPTIRPRVAVNNVEVTGDKQYYLILQEFGEQE 499
Query: 346 VKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDD 405
+ IL N LA CDV YDSSD S+ ELL + + +P + +A K D
Sbjct: 500 -EAILQNPSRLAECDVLCLTYDSSDPESFSYLLELLTNNEIMKD-----IPVVFVALKAD 553
Query: 406 LKPYTMAVQ-DSARVTQELGIEPPIPVSMK-SKDLNNVFSRIIWAAEHP 452
L + T L ++ P+ VS S LN +F +II A+ P
Sbjct: 554 LDKQQQRCKFQPDEFTDTLYLDHPLHVSSTWSSSLNQLFKKIIQASLEP 602
>sp|Q864R5|MIRO2_PIG Mitochondrial Rho GTPase 2 OS=Sus scrofa GN=RHOT2 PE=2 SV=1
Length = 620
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 246/479 (51%), Gaps = 43/479 (8%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RI
Sbjct: 133 PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI 192
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122
F + D DMD AL+D ELN FQ CF PL P + VK VV GV D LTL GFL
Sbjct: 193 FRLSDQDMDQALSDQELNAFQTCCFGHPLAPQALEDVKLVVSRNVAGGVQDDRLTLDGFL 252
Query: 123 FLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGI 182
FL+ LFI++GR ETTW +LR+FGY D LEL D+L + P S EL +F + +
Sbjct: 253 FLNTLFIQRGRHETTWTILRRFGYSDSLELTPDYLFPALHVPPGCSAELNHHGYQFAQRM 312
Query: 183 FGLYDIDNDGAVRPAELEDLFLTAPESPWD-----EAPYKDAAETTAL-------GNLTL 230
+D D DGA+ PAELE LF P PW P++ + A G+L
Sbjct: 313 LEKHDQDRDGALSPAELESLFSVFPGPPWGPQLPRHRPHRGRSAAPARVPLPVDPGDLLG 372
Query: 231 KGFVSK--WALMTLLDP-RHSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQTERNVFRC 287
+ +S+ W L L P R LA + + G+ A K QT+RNV C
Sbjct: 373 RPALSRAPW-LPGLPHPLRAGLAGARHHSHQGEEAGP-----------GKGQTQRNVLLC 420
Query: 288 LLFGPQNAGKSALLNSFLERPFSENYAPTTGEQ-YAVNVVDQPGGNKKTLILQEIPEEGV 346
+ G + GKS+ L +FL R + P YA++ V + GG +K LIL E+ +
Sbjct: 421 KVLGARGVGKSSFLRAFLGRGLGDARGPPEEPSVYAIDTV-RVGGQEKYLILCEVAADS- 478
Query: 347 KKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDD- 405
L EA ASCDV ++DSSD S+ + G+ +PCL I+SK D
Sbjct: 479 ---LLTAEADASCDVACLMFDSSDPGSFALCASVYKRHYMDGQ-----IPCLFISSKADL 530
Query: 406 ---LKPYTMAVQDSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETET 461
L P ++ + R L + ++ VF+R+ A PHL E T
Sbjct: 531 PEGLSPPGLSPSEFCR-RHRLPAPTLFSCAGPAEPSTAVFARLATMATFPHLVHGELHT 588
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQE 340
+R+V R LL G GK++L+ S + F E P E+ + P ++
Sbjct: 2 KRDV-RILLLGEAQVGKTSLILSLVGEEFPEE-VPPRAEEITIPADVTPEKVPTHIVDYS 59
Query: 341 IPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLI 400
E+ +++ ++ + V VYD S+E + ++ + + + G G VP +L+
Sbjct: 60 EAEQTAEEL---QDEIQKASVVCVVYDVSEETTVEKIRTKWIPLVNGGTRRGPRVPIILV 116
Query: 401 ASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452
+K DL+P ++Q IE + S K+ K+++ +F A HP
Sbjct: 117 GNKSDLRPGGSMEAVLPIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHP 169
>sp|Q758X6|GEM1_ASHGO Mitochondrial Rho GTPase 1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GEM1 PE=3 SV=1
Length = 661
Score = 271 bits (694), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 244/475 (51%), Gaps = 25/475 (5%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PI++ F+E+ETC++CSA + V FY Q+A+ HP APLFD LKP ++ALKRI
Sbjct: 147 PILKAFKEVETCIKCSAKNKLNVNQAFYLCQRAITHPLAPLFDARIGELKPLAIQALKRI 206
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDG---------VND 113
F++ D D D L+ E+ Q KCF + E+ + + + + V +
Sbjct: 207 FVLSDKDQDDYLSSEEIAALQKKCFGKTMDVNELNFIYKTLVDLSASNQQYADCSLFVQN 266
Query: 114 LGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELAS 173
G+T GFL L+ ++ E GR ETTW +LR F Y D L + D L ++ SVEL+
Sbjct: 267 KGITKMGFLVLNKMYAENGRHETTWGILRSFHYTDSLSISDKVLYPKVDITDTSSVELSP 326
Query: 174 EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLK 231
FL +F +D DNDG + EL LF P P W E + + G +TL+
Sbjct: 327 LGYRFLVDVFLAFDKDNDGGLNEDELNVLFKCTPGLPKLWSETCFPYSTVVNNRGFITLQ 386
Query: 232 GFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVT------RKRSVDRKKQQTERNVF 285
G+++ W++ T +D + + L+Y+G+ D AL VT R+ + + +R VF
Sbjct: 387 GWLAHWSMTTFIDYKTTTEYLVYLGFEKDAKLALHVTRARRKRRRNGIFYRAPVNDRKVF 446
Query: 286 RCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG 345
C + G N+GKS+LL SFL RPFSE Y+PT + AVN ++ GG + LILQE ++
Sbjct: 447 NCYILGKPNSGKSSLLESFLGRPFSETYSPTIRPKIAVNSLELKGGKQYYLILQEFGQQE 506
Query: 346 VKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDD 405
IL N++ + CDV YDSSD S+ L+ L +P + +A K D
Sbjct: 507 -PAILENQQKVMECDVLCLAYDSSDPESFSYLVNLVNRYQHLK-----ALPMVFVALKAD 560
Query: 406 L-KPYTMAVQDSARVTQELGIEPPIPVS-MKSKDLNNVFSRIIWAAEHPHLNIPE 458
L K T++L +E P+ +S M LN +F ++ A P N PE
Sbjct: 561 LDKQQQRCNVQPDDFTEQLLLEHPLHISCMWPSSLNELFIKLTDVALEPAKNTPE 615
>sp|Q5ABR2|GEM1_CANAL Mitochondrial Rho GTPase 1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=GEM1 PE=3 SV=2
Length = 644
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 268/531 (50%), Gaps = 53/531 (9%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
P++ +F+EIE V CSA V + FY Q+AV HP +P+FD E LKP ++ LKRI
Sbjct: 117 PLINEFKEIEAGVRCSAKNNYNVVEAFYLCQRAVTHPISPIFDAKEGNLKPGAIKPLKRI 176
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEK---------------- 106
F + D D DG LN EL+E KCF ++ + ++ +K
Sbjct: 177 FWLSDTDQDGYLNFEELSELHKKCFGIEASKSDYEEIVNLIDQKILPSYNTTIETQTPPQ 236
Query: 107 -QHDGVN-----------DLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRD 154
QH + G++ GF+ L+ ++ E GR ET W +LR + Y + L L D
Sbjct: 237 QQHLATSAGTPNGTTTTTSKGISEDGFILLNKIYAESGRHETVWCILRAYHYTNSLSLSD 296
Query: 155 DFLPVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WD 212
FL ++P SVEL+ +F +F +D DNDG + EL LF + P P W
Sbjct: 297 KFLYPRLDVNPHSSVELSPTGYKFFVDLFIKFDKDNDGGLNEDELNTLFRSTPGIPKLWV 356
Query: 213 EAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-GDPAAALRVTRKR 271
E+ + + G +TL+G++++W L T L + +L L Y+G+ G+ AL+VT+ R
Sbjct: 357 ESNFPSSIVCNEEGYVTLQGWLAQWNLTTFLSYKTTLEYLAYLGFDEGNSTKALKVTKPR 416
Query: 272 SVDRKKQQT------ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNV 325
+ +K +T +RNVF C + G AGKS+LL SFL +S+ Y+PT + V
Sbjct: 417 KIRQKNGKTYRNAVNDRNVFNCFIVGAPKAGKSSLLESFLHGSYSDIYSPTIQPRLVVKD 476
Query: 326 VDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVA 385
++ GG K+ ++ E E IL NK L CDV + YDSSD S++ EL +
Sbjct: 477 IELRGG-KQCYLILEELGELEPAILENKSRLDQCDVICYAYDSSDPESFQYLVELREKHG 535
Query: 386 RLGEDSGYGVPCLLIASKDDL-KPYTMAVQDSARVTQELGIEPPIPVSMK-SKDLNNVFS 443
L ++ VP + +A K DL K T++L + P+ VS+ + L+ +F
Sbjct: 536 HLLDE----VPAVFVALKADLDKQQQRCDVQPENYTRDLFLNSPLHVSLAWNSSLHEMFI 591
Query: 444 RIIWAAEHPHLNIP--ETETGRNRKRYRHLVNSSLVFVSVGAAVAVVGLAA 492
+++ AA+ P P E E ++ +H++ + GAA+AVVGL +
Sbjct: 592 QLVDAAKTPSSATPGIELEVSVDQDDIKHIIMT-------GAAIAVVGLVS 635
>sp|Q6C2J1|GEM1_YARLI Mitochondrial Rho GTPase 1 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=GEM1 PE=3 SV=1
Length = 665
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 255/495 (51%), Gaps = 42/495 (8%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
M PI+++F+EIE+C+ SA + FY QKAV+HP APLFD E LKP V AL+
Sbjct: 140 MIPILREFKEIESCIRVSAKLNHNINQAFYLCQKAVMHPIAPLFDAKEGKLKPNAVAALQ 199
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120
R+F + D D DG L+D E+ E QVKCF +++ ++ + + + G++ G
Sbjct: 200 RVFFLSDRDQDGYLSDQEMLELQVKCFGRSFDATDLIQIRAQLAKINPALATERGVSEEG 259
Query: 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLR 180
F+ L+ L+ +KGR ETTW +LR F Y D L L D FL + + SVEL+ E FL
Sbjct: 260 FITLNRLYADKGRHETTWGILRTFHYTDYLSLSDQFLYPKLDVPENSSVELSPEGYRFLV 319
Query: 181 GIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWA 238
+F L+D DNDG + +EL+ LF P P W + + G++TL+G+++ W+
Sbjct: 320 DLFLLFDKDNDGGLNDSELKTLFKPTPGIPQKWLDFNFPYTTVHDEQGSITLQGWLALWS 379
Query: 239 LMTLLDPRHSLANLIYVGYGGDPA-----------------------AALRVTRKRSVDR 275
+ T LD + ++A L Y+G+ GD + A +VT+ +
Sbjct: 380 MTTFLDYKTTMAYLAYLGFEGDNSKKRFSGSSVTVAMTTAAAAAARLTAFKVTKPKKRRS 439
Query: 276 KKQQ------TERNVFRCLLFGPQNAGKSALLNSFLERPF-SENYAPTTGEQYAVNVVDQ 328
+ + +R+VF C + G +GK++LL +FL RP ++ Y PT VN V+
Sbjct: 440 RPRPYYRATPNDRSVFNCFVLGSHMSGKTSLLEAFLNRPLMTDIYKPTIRPVSVVNSVEM 499
Query: 329 PGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLG 388
GG + ++++E+ ++ +LSN L CDV + YDSSD S+ L + L
Sbjct: 500 TGGKQCYMVMEELGQQEA-AVLSNAARLEECDVICYTYDSSDPNSFSYIDGLRRKYPVLD 558
Query: 389 EDSGYGVPCLLIASK--DDLKPYTMAVQDSARVTQELGIEPPIPVSMK-SKDLNNVFSRI 445
+PC+ +A K +D + +Q T+++ I P+ VS K + +F ++
Sbjct: 559 T-----LPCVFVALKADNDRQQQRFDLQPD-EYTKQIRIAAPLHVSSKWPSSVTELFIQL 612
Query: 446 IWAAEHPHLNIPETE 460
AA+ P +P +
Sbjct: 613 AEAAQQPGRGLPNQD 627
>sp|Q6CY37|GEM1_KLULA Mitochondrial Rho GTPase 1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GEM1 PE=3 SV=1
Length = 659
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 261/528 (49%), Gaps = 46/528 (8%)
Query: 3 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRI 62
PI+++F+E+ETC++ SA V FY Q+ + +P APLFD LKP V ALKR+
Sbjct: 148 PILREFKEVETCIKASAKFKFNVNQAFYLCQRTITNPVAPLFDARIGELKPLGVLALKRV 207
Query: 63 FIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVV------QEKQHDGVNDL-- 114
F++ D D DG LND E+ + Q KCF+ + E+ +K + ++ D + ++
Sbjct: 208 FVLSDMDQDGFLNDDEITKLQKKCFSKAVDVNELQFLKDTLTSISSPNQEYEDYILNVPG 267
Query: 115 -GLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELAS 173
G+T GFL L+ ++ EKGR ETTW +LR F Y D L + + L + SVEL+
Sbjct: 268 KGITKDGFLVLNKIYAEKGRHETTWGILRAFHYTDTLTINEKILRPKIDIPQSSSVELSP 327
Query: 174 EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLK 231
F F YD DNDG + EL LF T P P W E + +TL+
Sbjct: 328 LGYRFFVDTFLKYDKDNDGGLNNDELHLLFKTTPGLPHLWIETNFPFLTVVNNSACITLQ 387
Query: 232 GFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQT---------ER 282
G+++ W++ T +D + LIY+G+ D AL++T+ R RK+++ +R
Sbjct: 388 GWLALWSMTTFIDYSVTTEYLIYLGFDKDAKNALQITKPR---RKRRRNGVYYRAPVFDR 444
Query: 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP 342
V C + G N+GKS+LL SFL R FSE Y+PT + +VN ++ GG + LILQE+
Sbjct: 445 KVLNCYMLGKGNSGKSSLLESFLGRSFSEAYSPTIRPKISVNSLELKGGKQYYLILQELG 504
Query: 343 EEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIAS 402
E+ IL NK L CDV YDSSD S+ L+ + L E +P + +A
Sbjct: 505 EQET-PILENKGKLDECDVLCLCYDSSDPESFSYIVSLIDKFDYLKE-----LPIVFVAL 558
Query: 403 KDDLKPYTMAVQ-DSARVTQELGIEPPIPVSMK-SKDLNNVFSRIIWAAEHPHLNI---- 456
K DL +L I+ P+ +S LN +F ++ A P +
Sbjct: 559 KADLDKQQQRCHIQPDDFADQLFIDHPLHISSTWPSSLNELFIKLTEVALEPITSTAGLG 618
Query: 457 PETETGRNRKRYRHLVNSSLVFVSVGAAVAVVGLAAYRAYAARRNSSS 504
P T N YR ++ A +VVG A+ + A + SS
Sbjct: 619 PAVLT--NDIDYRQ---------TIVAISSVVGFASLFTFTALKIYSS 655
>sp|O59781|GEM1_SCHPO Mitochondrial Rho GTPase 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gem1 PE=3 SV=1
Length = 630
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 266/501 (53%), Gaps = 28/501 (5%)
Query: 1 MGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALK 60
M P++ +F+EIE C+ CSA I V ++FY + V++P PL+D E+T++ + AL
Sbjct: 131 MIPLINEFKEIEACILCSALEKINVNELFYMCRACVIYPITPLWDAKERTMRKATIHALS 190
Query: 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120
RIF + D + D L+ ELN KCF+ L + + V+E +GV + LTL G
Sbjct: 191 RIFFLIDKNNDDLLSVDELNSLSEKCFSKNLSIEDASEILSKVKEICPEGVYEGQLTLPG 250
Query: 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLR 180
FL + + +E G+ E+TW +LR F Y D L L D +L +++P Q VEL+ + FL
Sbjct: 251 FLAYNRVQVENGKQESTWGILRAFHYTDSLSLDDSYLSPKFEVAPGQIVELSPKGYRFLV 310
Query: 181 GIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWA 238
+F +D DNDGA+ EL LF P P W + + ++ G +T G++++W+
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLAQWS 370
Query: 239 LMTLLDPRHSLANLIYVGYG----GDPAAALRVTRKR-SVDRKKQQTERNVFRCLLFGPQ 293
++TL D + +LA L Y+G+ G AL+V RKR S +RK + +RNVF C + G +
Sbjct: 371 MITLFDYKTTLAYLAYLGFDTDGRGHNTDALKVMRKRVSQNRKVSKYDRNVFLCFVVGSK 430
Query: 294 NAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNK 353
+ GK+ALL+SF+ + P T VN V + ++ L+L EI E + IL+
Sbjct: 431 SCGKTALLSSFINNN-TNRLTPNT----VVNSV-EFQSTQRYLVLSEIGETDL-DILAEP 483
Query: 354 EALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL--KPYTM 411
++L +CD+ +YDSS+ S+ LL L + +PC+ A+K DL +
Sbjct: 484 KSLEACDILCLLYDSSNPNSFSFIANLLNLYPDLQK-----IPCVFAATKADLDRQQQRY 538
Query: 412 AVQDSARVTQELGIEPPIPVSMKS--KDLNNVFSRIIWAAEHPH---LNIPETETGR-NR 465
VQ T++LG+ P +S + F ++ +A++P + IPE ++ + N
Sbjct: 539 PVQPD-EFTKQLGLPSPTHISTAAIWNTSKEFFIQLAESAQYPASSIIRIPEEDSNKTNY 597
Query: 466 KRYRHLVNSSLVFVSVGAAVA 486
+ L + +SVG ++
Sbjct: 598 QLVAALTAFGALLLSVGGSLT 618
>sp|Q55G45|GEMA_DICDI Probable mitochondrial Rho GTPase gemA OS=Dictyostelium discoideum
GN=gemA PE=3 SV=1
Length = 658
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 203/391 (51%), Gaps = 13/391 (3%)
Query: 15 VECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGAL 74
+ECSA TM +P++ Y +Q +V P L++ +E + C RALKRIF +CDHD DG+L
Sbjct: 152 LECSAKTMENLPELLYASQTSVFFPERILYNREENKMTEGCERALKRIFKLCDHDNDGSL 211
Query: 75 NDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRL 134
++ E+N FQ KC + + EI +++ V K DGVN G T GFL+++ LF+ +G
Sbjct: 212 SEEEINYFQTKCGHETMTSEEIQNIQQFVLSKIPDGVNSNGFTEKGFLYMNLLFLLRGPC 271
Query: 135 ETTWAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAV 194
+ TW LR F Y DDL L + ++ ++ P+ + L+S EF + +F YD D+DG +
Sbjct: 272 QHTWTSLRSFNYDDDLVLLESYVHPTLQVPPNHNTILSSMGNEFFKSLFEKYDSDSDGVL 331
Query: 195 RPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIY 254
+L LF T P+ PW E ++ T NLTL GF+S W L T + + +L L Y
Sbjct: 332 SSFDLVSLFSTTPKIPW-EIGFEKHFNTDKDSNLTLSGFLSLWNLQTYENYKVTLEYLAY 390
Query: 255 VGYG--GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSEN 312
G + + + R +D K Q RN+ C +FG + GK+ LN+F+ + FS
Sbjct: 391 FGSQTENNNIDMISILNSRELDIKSNQFTRNIVNCYVFGAEAVGKTTFLNTFIGKSFSTL 450
Query: 313 YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEY 372
Y T G V N K LIL E E + E + CD+ +YD + E
Sbjct: 451 YNATNGND-NFKVCGHLLKN-KYLILSEYVGEKIPT----AELKSKCDLVCLLYDCNSEQ 504
Query: 373 SWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
S+K + + ++ + +P + I +K
Sbjct: 505 SFKFIENIYNQLKQ----QQLNIPIVFIRTK 531
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + + E+Y T G + + V+Q G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +DE S+ K+ L E+ R D+ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIIVYDVTDEESFNNVKQWLSEIDRYASDN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSARV-TQELGIEPPIPVSMKSKDLNNV 441
DL ++A+ E+GI P + S +KD NV
Sbjct: 123 SDLTENRAIPYETAKAFADEIGI-PFMETS--AKDATNV 158
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + + ++Y T G + + V+Q G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R D+ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIIVYDVTDQESFNNVKQWLNEIDRYASDN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSARV-TQELGIEPPIPVSMKS 435
DL + ++A+ E+GI P + S K+
Sbjct: 123 SDLTANKVVATETAKAFADEMGI-PFMETSAKN 154
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESFNNVKQWLHEIDRYACEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIE 426
DL + D+A+ + LGIE
Sbjct: 123 SDLTAKRVVSTDAAKEFAESLGIE 146
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + + E+Y T G + + V+Q G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESFNNVKQWLNEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKSKDLNNV 441
DL + ++ + + E+GI P + S +KD NV
Sbjct: 123 CDLAENRVVSYEAGKALADEIGI-PFLETS--AKDATNV 158
>sp|P07560|SEC4_YEAST Ras-related protein SEC4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC4 PE=1 SV=1
Length = 215
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP 342
++ + LL G GKS LL F+E F+ ++ T G + + VD G K +
Sbjct: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78
Query: 343 EEGVKKILSN--KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLI 400
+E + I + + A+ I VYD +DE ++ K+ V D LL+
Sbjct: 79 QERFRTITTAYYRGAMG----IILVYDVTDERTFTNIKQWFKTVNEHANDEA---QLLLV 131
Query: 401 ASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKSKD-LNNVF 442
+K D++ + + +ELGI P I S K+ D +N +F
Sbjct: 132 GNKSDMETRVVTADQGEALAKELGI-PFIESSAKNDDNVNEIF 173
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + + ++Y T G + + V+Q G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I YD +D S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVTYDVTDLESFNNVKQWLNEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSARV-TQELGIEPPIPVSMKS 435
+DL + ++A+ ELGI P + S K+
Sbjct: 123 NDLTSQKVVSTETAKAFADELGI-PFLETSAKN 154
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + V+ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESFNNVKQWLAEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSARV-TQELGIEPPIPVSMKS 435
DL + +A+ E+GI P + S K+
Sbjct: 123 SDLTGKKVVDYQAAKAFADEIGI-PFLETSAKN 154
>sp|Q91YQ1|RAB7L_MOUSE Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab7l1 PE=2 SV=1
Length = 204
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP 342
++F+ L+ G GK++L+ + + FS++Y T G +A+ V+ L L +I
Sbjct: 6 HLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIA 65
Query: 343 EEGVKKILSNKEAL---ASCDVTIFVYDSSDEYS----WKRTKELLVEVARLGEDSGYGV 395
G ++ S AS V +F ++ +S WK+ + ++L SG V
Sbjct: 66 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLD-----SKLTLPSGEPV 118
Query: 396 PCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK-SKDLN 439
PCLL+A+K DL P+ ++ R ++E G S+K +K++N
Sbjct: 119 PCLLLANKSDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNIN 163
>sp|P34140|RAB1B_DICDI Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B
PE=2 SV=2
Length = 206
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D S+ K+ + E+ R DS V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDHVSFNNVKQWMQEIQRYACDS---VTRLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +AR +GI P + S KS
Sbjct: 123 CDLIEKKIVDTSTAREYADSVGI-PFLETSAKS 154
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESYANVKQWLQEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +A+ LGI P + S K+
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN 154
>sp|Q63481|RAB7L_RAT Ras-related protein Rab-7L1 OS=Rattus norvegicus GN=Rab7l1 PE=2
SV=1
Length = 204
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP 342
++F+ L+ G GK++L+ + + FS++Y T G +A+ V+ L L +I
Sbjct: 6 HLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIA 65
Query: 343 EEGVKKILSNKEAL---ASCDVTIFVYDSSDEYS----WKRTKELLVEVARLGEDSGYGV 395
G ++ S AS V +F ++ +S WK+ + ++L SG V
Sbjct: 66 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLD-----SKLTLPSGEPV 118
Query: 396 PCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK-SKDLN 439
PCLL+A+K DL P+ ++ R ++E G S+K +K++N
Sbjct: 119 PCLLLANKSDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNIN 163
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESYANVKQWLQEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +A+ LGI P + S K+
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN 154
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESYANVKQWLQEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +A+ LGI P + S K+
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN 154
>sp|O42819|SEC4_CANGA Ras-related protein SEC4 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC4 PE=3
SV=1
Length = 215
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 263 AALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYA 322
+ALR S + K + + + LL G GKS LL F+E F+ ++ T G +
Sbjct: 2 SALRTVSGSSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 323 VNVVDQPGGNKKTLILQEIPEEGVKKILSN--KEALASCDVTIFVYDSSDEYSWKRTKEL 380
+ VD G K + +E + I + + A+ I VYD +DE ++ K+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMG----IILVYDVTDERTFANIKQW 114
Query: 381 LVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKSKD-LN 439
V D LL+ +K D+ + + + +ELG+ P I S K+ D +N
Sbjct: 115 FKTVNEHANDE---AQLLLVGNKSDMDTRVVTYEQGEALAKELGL-PFIESSAKNDDNVN 170
Query: 440 NVF 442
+F
Sbjct: 171 EIF 173
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDRESYANVKQWLQEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +A+ LGI P + S K+
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN 154
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERGRTITSSYYRGAHG--IIVVYDVTDQESYANVKQWLQEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +A+ LGI P + S K+
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGI-PFLETSAKN 154
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 343
+F+ LL G GKS LL F + ++E+Y T G + + ++ G K I +
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASK 403
E + I S+ A I VYD +D+ S+ K+ L E+ R ++ V LL+ +K
Sbjct: 68 ERFRTITSSYYRGAHG--IIVVYDVTDQESYANVKQWLQEIDRYASEN---VNKLLVGNK 122
Query: 404 DDLKPYTMAVQDSAR-VTQELGIEPPIPVSMKS 435
DL + +A+ LG+ P + S K+
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGV-PFLETSAKN 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,121,916
Number of Sequences: 539616
Number of extensions: 8218706
Number of successful extensions: 24555
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 560
Number of HSP's that attempted gapping in prelim test: 23982
Number of HSP's gapped (non-prelim): 882
length of query: 504
length of database: 191,569,459
effective HSP length: 122
effective length of query: 382
effective length of database: 125,736,307
effective search space: 48031269274
effective search space used: 48031269274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)