Query 010673
Match_columns 504
No_of_seqs 529 out of 3479
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 11:50:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010673.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010673hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dkx_A RAS-related protein RAB 100.0 1.8E-28 6.2E-33 229.8 17.0 163 283-451 12-176 (216)
2 3q3j_B RHO-related GTP-binding 99.9 6.4E-25 2.2E-29 205.8 17.6 169 279-454 22-206 (214)
3 3tw8_B RAS-related protein RAB 99.9 1.5E-24 5.3E-29 196.5 18.9 164 281-451 6-171 (181)
4 3reg_A RHO-like small GTPase; 99.9 2.8E-24 9.7E-29 197.8 19.8 166 281-453 20-190 (194)
5 1g16_A RAS-related protein SEC 99.9 2.6E-24 8.9E-29 192.9 18.5 163 283-451 2-165 (170)
6 3cbq_A GTP-binding protein REM 99.9 1.9E-24 6.5E-29 199.5 17.9 167 281-452 20-189 (195)
7 3t5g_A GTP-binding protein RHE 99.9 2E-24 7E-29 196.2 17.8 167 282-454 4-172 (181)
8 2hup_A RAS-related protein RAB 99.9 1.6E-24 5.6E-29 200.9 17.2 167 280-451 25-193 (201)
9 3tkl_A RAS-related protein RAB 99.9 3.3E-24 1.1E-28 197.3 19.1 166 281-452 13-180 (196)
10 3kkq_A RAS-related protein M-R 99.9 3.3E-24 1.1E-28 195.1 18.9 164 281-450 15-181 (183)
11 3q85_A GTP-binding protein REM 99.9 1.7E-24 5.9E-29 194.1 16.1 165 283-451 1-167 (169)
12 1z08_A RAS-related protein RAB 99.9 3E-24 1E-28 192.7 17.7 164 282-451 4-169 (170)
13 2ew1_A RAS-related protein RAB 99.9 3.5E-24 1.2E-28 198.7 18.7 164 281-450 23-188 (201)
14 2g6b_A RAS-related protein RAB 99.9 5.8E-24 2E-28 192.7 19.7 168 281-454 7-177 (180)
15 1z0j_A RAB-22, RAS-related pro 99.9 5.8E-24 2E-28 190.6 18.9 162 283-450 5-168 (170)
16 2efe_B Small GTP-binding prote 99.9 6E-24 2.1E-28 192.8 19.2 165 281-451 9-175 (181)
17 1r2q_A RAS-related protein RAB 99.9 3.3E-24 1.1E-28 192.0 17.2 162 282-449 4-167 (170)
18 1z0f_A RAB14, member RAS oncog 99.9 5.1E-24 1.8E-28 192.6 18.5 164 281-450 12-177 (179)
19 2fu5_C RAS-related protein RAB 99.9 1.3E-24 4.5E-29 197.8 14.6 163 282-450 6-170 (183)
20 1z2a_A RAS-related protein RAB 99.9 2.6E-24 8.8E-29 192.5 15.9 162 282-450 3-166 (168)
21 3oes_A GTPase rhebl1; small GT 99.9 1.9E-24 6.7E-29 200.2 15.5 170 278-453 18-189 (201)
22 2atx_A Small GTP binding prote 99.9 9.8E-24 3.4E-28 194.1 20.0 164 282-452 16-194 (194)
23 1zbd_A Rabphilin-3A; G protein 99.9 1.2E-23 4.1E-28 194.9 20.4 163 282-450 6-170 (203)
24 3cph_A RAS-related protein SEC 99.9 7.6E-24 2.6E-28 197.6 19.0 168 277-450 13-181 (213)
25 2a5j_A RAS-related protein RAB 99.9 4.8E-24 1.7E-28 195.8 17.4 164 281-450 18-183 (191)
26 1ek0_A Protein (GTP-binding pr 99.9 5.4E-24 1.9E-28 190.6 17.3 160 284-449 3-167 (170)
27 2fg5_A RAB-22B, RAS-related pr 99.9 5.2E-24 1.8E-28 195.8 17.6 165 281-451 20-186 (192)
28 2gf9_A RAS-related protein RAB 99.9 6E-24 2E-28 194.8 17.9 164 281-450 19-184 (189)
29 1c1y_A RAS-related protein RAP 99.9 7.3E-24 2.5E-28 189.4 17.8 162 284-450 3-166 (167)
30 1wms_A RAB-9, RAB9, RAS-relate 99.9 1.6E-23 5.4E-28 189.3 20.1 168 282-451 5-174 (177)
31 2bcg_Y Protein YP2, GTP-bindin 99.9 1.2E-23 3.9E-28 195.6 19.6 164 282-451 6-171 (206)
32 2bme_A RAB4A, RAS-related prot 99.9 7.3E-24 2.5E-28 193.3 17.9 165 281-451 7-173 (186)
33 2nzj_A GTP-binding protein REM 99.9 1E-23 3.6E-28 190.0 18.5 162 283-450 3-168 (175)
34 3dz8_A RAS-related protein RAB 99.9 2E-24 6.7E-29 198.4 14.0 165 281-451 20-186 (191)
35 1m7b_A RND3/RHOE small GTP-bin 99.9 8.8E-24 3E-28 192.8 18.0 164 281-451 4-183 (184)
36 3c5c_A RAS-like protein 12; GD 99.9 2.9E-24 1E-28 196.8 14.9 165 281-450 18-185 (187)
37 2hxs_A RAB-26, RAS-related pro 99.9 2.1E-24 7.1E-29 195.3 13.6 168 282-453 4-175 (178)
38 1x3s_A RAS-related protein RAB 99.9 1.2E-23 4.1E-28 193.2 18.4 166 282-452 13-179 (195)
39 3q72_A GTP-binding protein RAD 99.9 7.3E-24 2.5E-28 189.4 16.3 160 284-450 2-163 (166)
40 3bc1_A RAS-related protein RAB 99.9 2.6E-23 8.7E-28 190.6 20.3 165 281-450 8-184 (195)
41 1kao_A RAP2A; GTP-binding prot 99.9 1E-23 3.5E-28 188.1 17.0 161 284-450 3-165 (167)
42 2iwr_A Centaurin gamma 1; ANK 99.9 1.4E-23 4.8E-28 190.1 18.1 160 282-450 5-168 (178)
43 3clv_A RAB5 protein, putative; 99.9 3.4E-23 1.2E-27 191.3 20.9 161 282-450 5-203 (208)
44 1u8z_A RAS-related protein RAL 99.9 1.3E-23 4.4E-28 187.6 17.4 163 283-451 3-167 (168)
45 2oil_A CATX-8, RAS-related pro 99.9 1E-23 3.6E-28 193.7 17.2 164 281-450 22-187 (193)
46 2fn4_A P23, RAS-related protei 99.9 7.7E-24 2.6E-28 191.8 16.1 166 281-452 6-173 (181)
47 2il1_A RAB12; G-protein, GDP, 99.9 7.1E-24 2.4E-28 195.0 15.8 164 281-450 23-189 (192)
48 2g3y_A GTP-binding protein GEM 99.9 1.8E-23 6E-28 195.3 18.6 164 281-450 34-202 (211)
49 2o52_A RAS-related protein RAB 99.9 7.4E-24 2.5E-28 196.2 15.8 164 281-450 22-187 (200)
50 4dsu_A GTPase KRAS, isoform 2B 99.9 2.9E-23 9.9E-28 189.5 19.5 164 282-451 2-166 (189)
51 2y8e_A RAB-protein 6, GH09086P 99.9 1.1E-23 3.9E-28 190.3 16.5 163 282-450 12-176 (179)
52 3ihw_A Centg3; RAS, centaurin, 99.9 2E-23 7E-28 190.7 18.2 162 279-451 15-180 (184)
53 2j0v_A RAC-like GTP-binding pr 99.9 8.7E-24 3E-28 197.3 15.9 165 282-453 7-182 (212)
54 2p5s_A RAS and EF-hand domain 99.9 7.6E-24 2.6E-28 195.9 15.3 165 281-451 25-197 (199)
55 2bov_A RAla, RAS-related prote 99.9 3.1E-23 1.1E-27 192.3 18.8 165 281-451 11-177 (206)
56 3cpj_B GTP-binding protein YPT 99.9 1.3E-23 4.6E-28 197.9 16.1 166 281-452 10-177 (223)
57 2q3h_A RAS homolog gene family 99.9 1.8E-23 6.3E-28 193.3 16.7 166 279-451 15-195 (201)
58 1vg8_A RAS-related protein RAB 99.9 4.7E-23 1.6E-27 191.3 19.2 167 281-450 5-174 (207)
59 1gwn_A RHO-related GTP-binding 99.9 2.6E-23 8.9E-28 193.5 17.3 162 282-450 26-203 (205)
60 1z06_A RAS-related protein RAB 99.9 4.1E-23 1.4E-27 189.2 18.2 164 281-449 17-186 (189)
61 2f7s_A C25KG, RAS-related prot 99.9 1.6E-23 5.5E-28 196.3 15.6 165 281-450 22-198 (217)
62 2ce2_X GTPase HRAS; signaling 99.9 9.5E-23 3.2E-27 181.5 19.6 161 284-450 3-164 (166)
63 3bwd_D RAC-like GTP-binding pr 99.9 4.3E-24 1.5E-28 193.9 10.8 164 282-452 6-182 (182)
64 1mh1_A RAC1; GTP-binding, GTPa 99.9 4.2E-23 1.4E-27 188.0 17.4 164 283-453 4-182 (186)
65 1ky3_A GTP-binding protein YPT 99.9 4.2E-23 1.5E-27 187.1 17.3 168 281-450 5-177 (182)
66 2a9k_A RAS-related protein RAL 99.9 4.3E-23 1.5E-27 187.9 17.1 163 282-450 16-180 (187)
67 2gco_A H9, RHO-related GTP-bin 99.9 5.5E-23 1.9E-27 190.4 18.0 164 280-450 21-199 (201)
68 2j1l_A RHO-related GTP-binding 99.9 3.6E-23 1.2E-27 193.8 16.4 164 282-452 32-210 (214)
69 2atv_A RERG, RAS-like estrogen 99.9 4.1E-23 1.4E-27 190.4 16.0 162 282-450 26-190 (196)
70 4gzl_A RAS-related C3 botulinu 99.9 4.2E-23 1.4E-27 191.8 16.0 161 282-449 28-203 (204)
71 2fv8_A H6, RHO-related GTP-bin 99.9 7.2E-23 2.5E-27 190.6 17.5 166 282-454 23-203 (207)
72 2erx_A GTP-binding protein DI- 99.9 3.7E-23 1.3E-27 185.5 15.0 165 283-452 2-168 (172)
73 3con_A GTPase NRAS; structural 99.9 1.9E-22 6.5E-27 184.7 19.8 163 283-451 20-183 (190)
74 2gf0_A GTP-binding protein DI- 99.9 9.6E-23 3.3E-27 187.9 16.8 168 282-454 6-174 (199)
75 2cjw_A GTP-binding protein GEM 99.9 1.1E-22 3.9E-27 187.1 17.0 163 282-450 4-171 (192)
76 4djt_A GTP-binding nuclear pro 99.9 5.8E-23 2E-27 192.6 15.2 168 281-454 8-178 (218)
77 3gj0_A GTP-binding nuclear pro 99.9 2.7E-23 9.2E-28 195.4 11.6 164 281-452 12-176 (221)
78 2yc2_C IFT27, small RAB-relate 99.9 7.4E-23 2.5E-27 189.9 14.3 166 282-450 18-191 (208)
79 2qtf_A Protein HFLX, GTP-bindi 99.9 4.4E-24 1.5E-28 215.2 5.3 297 126-454 40-357 (364)
80 1upt_A ARL1, ADP-ribosylation 99.9 9.4E-22 3.2E-26 176.4 18.9 162 280-451 3-169 (171)
81 3l0i_B RAS-related protein RAB 99.9 2.5E-24 8.5E-29 199.2 1.9 164 281-450 30-195 (199)
82 4bas_A ADP-ribosylation factor 99.9 8.5E-22 2.9E-26 181.5 18.9 166 280-452 13-190 (199)
83 1zj6_A ADP-ribosylation factor 99.9 4.1E-22 1.4E-26 182.2 15.4 163 282-455 14-182 (187)
84 1ksh_A ARF-like protein 2; sma 99.9 1.2E-21 4.1E-26 178.7 18.4 161 282-452 16-181 (186)
85 1zd9_A ADP-ribosylation factor 99.9 7E-22 2.4E-26 180.9 16.9 161 279-451 17-185 (188)
86 1r8s_A ADP-ribosylation factor 99.9 7.3E-22 2.5E-26 176.0 15.4 153 285-450 1-161 (164)
87 3t1o_A Gliding protein MGLA; G 99.9 1.5E-22 5E-27 186.1 11.1 163 281-451 11-192 (198)
88 1f6b_A SAR1; gtpases, N-termin 99.9 9.9E-22 3.4E-26 181.6 15.1 157 282-448 23-196 (198)
89 1m2o_B GTP-binding protein SAR 99.9 1.4E-21 4.8E-26 179.3 16.0 156 282-448 21-189 (190)
90 2zej_A Dardarin, leucine-rich 99.9 2.3E-22 7.8E-27 183.6 10.6 163 284-452 2-179 (184)
91 2h57_A ADP-ribosylation factor 99.9 3.7E-21 1.3E-25 176.2 17.6 162 281-450 18-186 (190)
92 1fzq_A ADP-ribosylation factor 99.9 1.7E-21 5.7E-26 177.4 15.1 156 281-450 13-177 (181)
93 2b6h_A ADP-ribosylation factor 99.9 3.2E-21 1.1E-25 177.3 16.9 157 281-450 26-190 (192)
94 2wkq_A NPH1-1, RAS-related C3 99.9 4.1E-21 1.4E-25 191.6 18.1 165 281-452 152-331 (332)
95 2h17_A ADP-ribosylation factor 99.9 1.7E-21 5.9E-26 177.1 13.7 158 280-448 17-180 (181)
96 2x77_A ADP-ribosylation factor 99.9 3.5E-21 1.2E-25 176.2 13.5 161 282-452 20-185 (189)
97 3th5_A RAS-related C3 botulinu 99.8 3.9E-23 1.3E-27 191.8 0.0 161 282-449 28-203 (204)
98 1moz_A ARL1, ADP-ribosylation 99.9 1.2E-20 4.1E-25 171.4 16.5 159 282-450 16-179 (183)
99 2f9l_A RAB11B, member RAS onco 99.8 2.3E-20 7.9E-25 172.4 18.0 163 282-450 3-167 (199)
100 2wji_A Ferrous iron transport 99.8 6E-21 2.1E-25 170.9 13.1 152 284-449 3-163 (165)
101 3gee_A MNME, tRNA modification 99.8 1.9E-20 6.4E-25 194.8 18.3 168 275-453 224-401 (476)
102 3llu_A RAS-related GTP-binding 99.8 1.1E-20 3.6E-25 174.3 12.0 162 280-449 16-195 (196)
103 1oix_A RAS-related protein RAB 99.8 4.8E-20 1.6E-24 169.3 16.1 162 282-449 27-190 (191)
104 3c5h_A Glucocorticoid receptor 99.8 2E-21 6.9E-26 186.9 6.5 165 280-450 15-254 (255)
105 2fh5_B SR-beta, signal recogni 99.8 7E-20 2.4E-24 171.0 16.6 162 282-449 5-214 (214)
106 3o47_A ADP-ribosylation factor 99.8 7.7E-20 2.6E-24 182.3 16.9 158 281-451 162-327 (329)
107 3iev_A GTP-binding protein ERA 99.8 2.6E-19 9E-24 176.8 20.1 178 281-466 7-198 (308)
108 2qu8_A Putative nucleolar GTP- 99.8 1.1E-19 3.9E-24 171.6 16.4 160 282-451 27-205 (228)
109 2lkc_A Translation initiation 99.8 5.4E-20 1.8E-24 166.1 13.6 160 281-453 5-173 (178)
110 1svi_A GTP-binding protein YSX 99.8 1.8E-19 6.1E-24 165.4 16.1 157 282-450 21-194 (195)
111 3i5g_C Myosin catalytic light 99.8 2.3E-21 7.8E-26 172.8 3.2 145 49-208 1-154 (159)
112 3r7w_A Gtpase1, GTP-binding pr 99.8 1.6E-19 5.3E-24 178.4 16.6 161 283-449 2-179 (307)
113 2lmt_A Calmodulin-related prot 99.8 4.7E-21 1.6E-25 168.4 4.9 142 50-205 3-147 (148)
114 3u0k_A Rcamp; fluorescent prot 99.8 1.1E-20 3.7E-25 188.6 7.5 148 44-205 289-439 (440)
115 2dyk_A GTP-binding protein; GT 99.8 1.6E-19 5.4E-24 160.1 13.9 150 285-449 2-160 (161)
116 3i5g_B Myosin regulatory light 99.8 7.6E-21 2.6E-25 168.3 5.3 141 47-206 6-149 (153)
117 2wjg_A FEOB, ferrous iron tran 99.8 9.3E-20 3.2E-24 166.3 12.4 157 283-453 6-171 (188)
118 2lhi_A Calmodulin, serine/thre 99.8 3.3E-21 1.1E-25 174.8 2.5 143 49-206 3-148 (176)
119 3lvq_E ARF-GAP with SH3 domain 99.8 4.5E-19 1.5E-23 187.1 18.9 164 281-457 319-490 (497)
120 3a1s_A Iron(II) transport prot 99.8 2E-19 6.9E-24 173.0 12.5 159 282-452 3-168 (258)
121 2gj8_A MNME, tRNA modification 99.8 9.5E-20 3.3E-24 164.3 9.5 154 283-450 3-165 (172)
122 2cxx_A Probable GTP-binding pr 99.8 2.5E-19 8.4E-24 163.6 12.1 155 285-451 2-184 (190)
123 3pqc_A Probable GTP-binding pr 99.8 8.8E-19 3E-23 160.4 15.8 157 281-450 20-193 (195)
124 3geh_A MNME, tRNA modification 99.8 1.5E-19 5.2E-24 187.3 11.9 190 248-453 175-386 (462)
125 2obh_A Centrin-2; DNA repair c 99.8 5.9E-20 2E-24 160.3 6.6 139 52-204 1-142 (143)
126 1wf3_A GTP-binding protein; GT 99.8 1.6E-18 5.5E-23 170.3 16.8 172 284-466 7-190 (301)
127 1xzp_A Probable tRNA modificat 99.8 1.2E-18 4E-23 181.4 15.7 160 276-450 235-404 (482)
128 3i8s_A Ferrous iron transport 99.8 2.7E-19 9.1E-24 173.9 9.6 157 284-452 3-170 (274)
129 3dpu_A RAB family protein; roc 99.8 5.4E-19 1.9E-23 187.9 12.7 163 281-453 38-210 (535)
130 3iby_A Ferrous iron transport 99.8 1.5E-19 5.2E-24 173.6 7.2 150 285-448 2-164 (256)
131 4dhe_A Probable GTP-binding pr 99.8 2.3E-18 7.7E-23 161.7 14.9 161 281-452 26-212 (223)
132 3r7w_B Gtpase2, GTP-binding pr 99.8 2.2E-19 7.4E-24 176.0 7.9 155 286-450 1-173 (331)
133 3b1v_A Ferrous iron uptake tra 99.8 7.3E-19 2.5E-23 170.2 10.5 152 284-451 3-164 (272)
134 1dtl_A Cardiac troponin C; hel 99.8 8.9E-19 3E-23 155.4 9.6 152 40-205 1-159 (161)
135 1exr_A Calmodulin; high resolu 99.8 8.1E-19 2.8E-23 153.8 8.7 142 49-204 2-146 (148)
136 3k53_A Ferrous iron transport 99.8 2.7E-18 9.1E-23 166.6 12.2 157 284-453 3-168 (271)
137 3qrx_A Centrin; calcium-bindin 99.7 1.8E-18 6.2E-23 154.8 8.6 146 48-207 19-167 (169)
138 2hjg_A GTP-binding protein ENG 99.7 1E-17 3.5E-22 173.5 14.4 160 282-452 173-350 (436)
139 3j04_B Myosin regulatory light 99.7 3.7E-18 1.3E-22 148.3 8.6 139 51-207 1-142 (143)
140 1lnz_A SPO0B-associated GTP-bi 99.7 1E-17 3.4E-22 167.1 12.7 163 284-453 158-332 (342)
141 3ox6_A Calcium-binding protein 99.7 6E-18 2E-22 148.3 9.6 143 48-204 2-152 (153)
142 2mys_B Myosin; muscle protein, 99.7 7.9E-18 2.7E-22 150.3 10.5 153 32-206 4-160 (166)
143 2e87_A Hypothetical protein PH 99.7 1.1E-16 3.6E-21 161.5 19.7 160 282-450 165-335 (357)
144 2jnf_A Troponin C; stretch act 99.7 4.2E-18 1.4E-22 150.6 8.2 146 48-207 4-157 (158)
145 4dcu_A GTP-binding protein ENG 99.7 1.8E-17 6.3E-22 172.6 13.8 162 281-453 192-371 (456)
146 3fwb_A Cell division control p 99.7 1E-17 3.6E-22 148.3 9.2 143 48-204 14-159 (161)
147 1nrj_B SR-beta, signal recogni 99.7 9.4E-18 3.2E-22 156.9 7.6 145 281-437 9-170 (218)
148 2bl0_C Myosin regulatory light 99.7 9.5E-18 3.2E-22 145.5 6.9 138 52-204 1-141 (142)
149 3k21_A PFCDPK3, calcium-depend 99.7 1.1E-17 3.6E-22 153.6 7.3 146 49-204 44-190 (191)
150 1mky_A Probable GTP-binding pr 99.7 8.2E-17 2.8E-21 166.9 14.8 153 285-450 2-165 (439)
151 1ega_A Protein (GTP-binding pr 99.7 9.6E-17 3.3E-21 157.9 14.4 172 284-466 8-191 (301)
152 2ovk_C Myosin catalytic light 99.7 3.4E-18 1.2E-22 151.6 3.5 144 50-208 2-154 (159)
153 3pm8_A PFCDPK2, calcium-depend 99.7 8.2E-18 2.8E-22 155.1 5.4 143 49-205 49-195 (197)
154 1wdc_C Scallop myosin; calcium 99.7 3.8E-18 1.3E-22 150.6 2.8 144 50-208 2-153 (156)
155 3qq5_A Small GTP-binding prote 99.7 1.5E-17 5.2E-22 170.1 6.8 158 282-452 32-197 (423)
156 4ds7_A Calmodulin, CAM; protei 99.7 1.9E-17 6.4E-22 144.2 6.3 142 48-204 2-146 (147)
157 2mys_C Myosin; muscle protein, 99.7 5.9E-17 2E-21 141.3 9.4 139 50-204 1-147 (149)
158 2f2o_A Calmodulin fused with c 99.7 2.3E-17 8E-22 149.0 6.9 146 49-208 3-151 (179)
159 1nya_A Calerythrin; EF-hand, m 99.7 3.8E-17 1.3E-21 146.9 8.1 142 51-206 1-165 (176)
160 3e3r_A Calcyphosin, calcyphosi 99.7 9.5E-18 3.2E-22 155.0 3.7 148 52-206 32-182 (204)
161 2ovk_B RLC, myosin regulatory 99.7 1.4E-17 4.9E-22 146.4 4.7 143 47-208 6-151 (153)
162 1top_A Troponin C; contractIle 99.7 3.4E-17 1.2E-21 145.1 6.4 142 49-204 12-159 (162)
163 3sjy_A Translation initiation 99.7 1E-15 3.5E-20 156.8 18.2 166 281-453 5-194 (403)
164 1y1x_A Leishmania major homolo 99.7 5.5E-17 1.9E-21 148.7 7.7 173 37-235 9-185 (191)
165 2hjg_A GTP-binding protein ENG 99.7 9.2E-17 3.1E-21 166.3 9.8 150 285-450 4-164 (436)
166 1s6i_A CDPK, calcium-dependent 99.7 8.5E-18 2.9E-22 153.8 1.7 144 49-207 2-146 (188)
167 2aao_A CDPK, calcium-dependent 99.7 8E-17 2.7E-21 143.5 7.7 143 49-206 19-162 (166)
168 1m45_A MLC1P, myosin light cha 99.7 5.1E-18 1.8E-22 148.3 -0.3 136 55-204 2-146 (148)
169 3dtp_E RLC, myosin regulatory 99.7 3E-17 1E-21 151.2 4.8 142 49-208 49-192 (196)
170 1wdc_B Scallop myosin; calcium 99.7 7.6E-17 2.6E-21 142.3 7.2 140 48-206 9-151 (156)
171 2ccm_A Calexcitin; EF hand, ca 99.7 1.6E-16 5.3E-21 145.2 9.4 144 48-205 3-171 (191)
172 3sjs_A URE3-BP sequence specif 99.7 5.7E-17 1.9E-21 152.2 6.5 139 48-207 42-182 (220)
173 1qv0_A Obelin, OBL; photoprote 99.7 1E-16 3.4E-21 146.8 7.5 144 48-205 11-177 (195)
174 2lvv_A Flagellar calcium-bindi 99.6 2.3E-17 7.9E-22 155.5 2.4 144 49-205 43-198 (226)
175 3akb_A Putative calcium bindin 99.6 2.8E-16 9.5E-21 139.7 8.8 137 55-205 2-160 (166)
176 1uhk_A Aequorin 2, aequorin; E 99.6 1.2E-16 4.3E-21 145.6 6.2 143 49-205 8-173 (191)
177 2ged_A SR-beta, signal recogni 99.6 2.9E-16 1E-20 143.7 8.6 129 282-421 46-183 (193)
178 1mky_A Probable GTP-binding pr 99.6 2E-15 6.9E-20 156.4 15.2 161 282-452 178-356 (439)
179 1w7j_B Myosin light chain 1; m 99.6 2.4E-17 8.2E-22 144.5 0.3 142 50-204 3-149 (151)
180 3cs1_A Flagellar calcium-bindi 99.6 4.5E-17 1.5E-21 152.7 2.2 144 49-205 40-195 (219)
181 2hpk_A Photoprotein berovin; s 99.6 1.6E-16 5.3E-21 147.5 5.7 142 49-205 28-190 (208)
182 3sg6_A Gcamp2, myosin light ch 99.6 1.5E-16 5.2E-21 162.6 5.6 174 10-204 272-448 (450)
183 3lxx_A GTPase IMAP family memb 99.6 9.5E-15 3.2E-19 138.7 17.7 165 281-451 26-214 (239)
184 3cb4_D GTP-binding protein LEP 99.6 3.7E-15 1.3E-19 158.6 16.5 161 283-453 3-184 (599)
185 2xtp_A GTPase IMAP family memb 99.6 2.1E-15 7.3E-20 145.1 13.0 165 281-451 19-208 (260)
186 2sas_A Sarcoplasmic calcium-bi 99.6 4.3E-16 1.5E-20 141.0 7.4 140 51-205 2-167 (185)
187 2bl0_B Myosin regulatory light 99.6 9.6E-17 3.3E-21 139.4 2.9 135 51-205 2-140 (145)
188 1alv_A Calpain, S-camld; calci 99.6 7.3E-16 2.5E-20 138.6 8.6 152 55-231 2-162 (173)
189 3q5i_A Protein kinase; CDPK, m 99.6 3.4E-16 1.2E-20 165.3 7.3 141 51-205 349-497 (504)
190 1s0u_A EIF-2-gamma, translatio 99.6 2.7E-14 9.3E-19 146.5 20.7 163 282-452 6-199 (408)
191 3mwu_A Calmodulin-domain prote 99.6 1.2E-15 4E-20 160.4 10.7 142 51-205 325-481 (486)
192 3izy_P Translation initiation 99.6 3.7E-17 1.3E-21 171.5 -1.0 161 283-453 3-170 (537)
193 1jba_A GCAP-2, protein (guanyl 99.6 1.3E-15 4.4E-20 140.8 9.6 150 52-208 17-179 (204)
194 2bec_A Calcineurin B homologou 99.6 1.5E-16 5.2E-21 146.9 2.7 146 48-206 20-184 (202)
195 1wb1_A Translation elongation 99.6 6.8E-15 2.3E-19 153.7 15.4 160 282-452 17-190 (482)
196 2l2e_A Calcium-binding protein 99.6 7.4E-16 2.5E-20 140.6 7.1 156 47-208 4-178 (190)
197 2ywe_A GTP-binding protein LEP 99.6 1.1E-14 3.9E-19 154.6 17.2 162 282-453 4-186 (600)
198 3khe_A Calmodulin-like domain 99.6 1.2E-16 4E-21 145.9 1.3 141 52-206 35-186 (191)
199 3j2k_7 ERF3, eukaryotic polype 99.6 1E-14 3.5E-19 150.7 16.0 153 281-443 14-217 (439)
200 3mse_B Calcium-dependent prote 99.6 9.5E-16 3.3E-20 139.0 7.1 139 49-205 29-178 (180)
201 1kk1_A EIF2gamma; initiation o 99.6 3.8E-14 1.3E-18 145.5 19.7 164 281-452 7-201 (410)
202 1q80_A SCP, sarcoplasmic calci 99.6 5E-16 1.7E-20 139.3 5.1 142 52-204 1-155 (174)
203 4dcu_A GTP-binding protein ENG 99.6 1.5E-15 5E-20 158.2 8.9 151 284-450 23-184 (456)
204 1d2e_A Elongation factor TU (E 99.6 1.3E-14 4.6E-19 148.2 15.3 161 283-452 2-196 (397)
205 2c78_A Elongation factor TU-A; 99.6 6.5E-15 2.2E-19 151.0 12.7 163 281-452 8-213 (405)
206 3lij_A Calcium/calmodulin depe 99.6 6.9E-16 2.4E-20 162.5 5.4 141 51-205 340-488 (494)
207 3t5d_A Septin-7; GTP-binding p 99.6 5.5E-15 1.9E-19 143.4 11.3 159 283-449 7-202 (274)
208 3a8r_A Putative uncharacterize 99.6 1.5E-15 5.2E-20 137.7 6.2 140 54-208 25-173 (179)
209 1ggw_A Protein (CDC4P); light 99.6 8.7E-16 3E-20 132.8 3.9 130 56-204 4-138 (140)
210 2znd_A Programmed cell death p 99.6 9.4E-16 3.2E-20 137.7 4.1 157 54-234 4-165 (172)
211 3lxw_A GTPase IMAP family memb 99.6 1.7E-14 5.8E-19 137.7 12.6 165 281-451 18-208 (247)
212 3nyv_A Calmodulin-domain prote 99.6 9.7E-16 3.3E-20 160.9 4.3 142 51-206 329-481 (484)
213 3tr5_A RF-3, peptide chain rel 99.6 8.6E-15 2.9E-19 154.1 11.4 128 283-424 12-163 (528)
214 1s6c_A KV4 potassium channel-i 99.6 6.3E-15 2.2E-19 133.5 8.9 152 49-208 13-171 (183)
215 3ll8_B Calcineurin subunit B t 99.6 1.8E-15 6E-20 132.9 5.0 142 52-206 1-145 (155)
216 2zfd_A Calcineurin B-like prot 99.6 3E-15 1E-19 140.9 6.5 151 48-208 39-197 (226)
217 2be4_A Hypothetical protein LO 99.5 6E-15 2.1E-19 142.2 8.1 180 49-236 3-221 (272)
218 1pui_A ENGB, probable GTP-bind 99.5 3.6E-14 1.2E-18 131.5 12.7 161 281-451 23-199 (210)
219 1jfj_A Ehcabp, calcium-binding 99.5 6.9E-16 2.4E-20 131.7 0.0 129 58-203 1-133 (134)
220 2ct9_A Calcium-binding protein 99.5 1.1E-15 3.8E-20 141.9 1.2 146 48-206 20-183 (208)
221 2aka_B Dynamin-1; fusion prote 99.5 8.2E-15 2.8E-19 143.8 7.4 157 282-448 24-250 (299)
222 2qac_A Myosin A tail domain in 99.5 2.3E-15 7.7E-20 131.2 2.9 135 50-204 7-145 (146)
223 2ehb_A Calcineurin B-like prot 99.5 3.6E-15 1.2E-19 138.1 4.3 151 49-209 29-187 (207)
224 1dgu_A Calcium-saturated CIB; 99.5 1E-14 3.6E-19 132.2 7.1 144 47-208 10-174 (183)
225 1zun_B Sulfate adenylate trans 99.5 7.5E-14 2.6E-18 144.3 13.3 150 282-441 22-214 (434)
226 3p26_A Elongation factor 1 alp 99.5 4.3E-14 1.5E-18 148.1 11.5 150 281-440 30-227 (483)
227 1g8i_A Frequenin, neuronal cal 99.5 9.1E-15 3.1E-19 133.2 5.4 146 57-208 25-178 (190)
228 3dd4_A KV channel-interacting 99.5 2.3E-14 7.7E-19 135.2 8.0 150 50-207 60-216 (229)
229 1s1e_A KV channel interacting 99.5 3.4E-14 1.2E-18 133.6 9.2 150 50-207 47-203 (224)
230 2hps_A Coelenterazine-binding 99.5 5.4E-16 1.8E-20 140.9 -3.5 143 48-205 5-166 (186)
231 2qag_A Septin-2, protein NEDD5 99.5 8.6E-15 3E-19 147.4 4.9 159 282-450 35-232 (361)
232 2j69_A Bacterial dynamin-like 99.5 1.1E-13 3.8E-18 150.6 13.9 164 281-450 66-324 (695)
233 3ohm_A Guanine nucleotide-bind 99.5 8E-14 2.8E-18 137.3 11.3 126 322-454 158-321 (327)
234 1jny_A EF-1-alpha, elongation 99.5 5E-14 1.7E-18 145.6 10.3 157 282-443 4-205 (435)
235 1fpw_A Yeast frequenin, calciu 99.5 1.3E-14 4.3E-19 132.2 5.0 150 50-208 21-178 (190)
236 3avx_A Elongation factor TS, e 99.5 1.7E-13 6E-18 152.3 14.4 161 281-450 293-485 (1289)
237 1udx_A The GTP-binding protein 99.5 4.2E-13 1.4E-17 136.8 16.1 165 283-453 156-327 (416)
238 1juo_A Sorcin; calcium-binding 99.5 7.1E-15 2.4E-19 135.3 2.8 154 51-231 27-187 (198)
239 2r2i_A Guanylyl cyclase-activa 99.5 5.6E-15 1.9E-19 135.9 1.8 149 51-207 8-161 (198)
240 1zo1_I IF2, translation initia 99.5 1.5E-15 5.2E-20 157.9 -2.6 156 283-449 3-165 (501)
241 3izq_1 HBS1P, elongation facto 99.5 1.1E-13 3.6E-18 148.5 11.3 151 281-441 164-362 (611)
242 2f33_A Calbindin; EF-hand, Ca2 99.5 3.7E-15 1.3E-19 142.9 -0.1 178 48-234 7-214 (263)
243 2d8n_A Recoverin; structural g 99.5 2.6E-14 9E-19 132.2 5.6 146 57-208 33-188 (207)
244 1g7s_A Translation initiation 99.5 1.2E-13 4E-18 147.3 11.3 154 283-450 4-217 (594)
245 1gjy_A Sorcin, CP-22, V19; cal 99.5 5.9E-14 2E-18 125.3 7.6 145 61-231 5-156 (167)
246 1k94_A Grancalcin; penta-EF-ha 99.5 5.7E-14 2E-18 125.0 7.0 151 61-239 3-160 (165)
247 1jwy_B Dynamin A GTPase domain 99.5 3.8E-13 1.3E-17 133.0 13.3 164 281-452 21-263 (315)
248 2i7a_A Calpain 13; calcium-dep 99.5 5.8E-14 2E-18 126.6 6.7 144 66-234 13-168 (174)
249 2f33_A Calbindin; EF-hand, Ca2 99.5 4.8E-14 1.6E-18 135.1 6.5 138 56-206 102-261 (263)
250 2dy1_A Elongation factor G; tr 99.5 4.3E-13 1.5E-17 145.5 14.6 133 281-424 6-154 (665)
251 2jul_A Calsenilin; EF-hand, ca 99.5 5.6E-14 1.9E-18 134.8 6.9 150 50-208 87-244 (256)
252 2ggz_A Guanylyl cyclase-activa 99.5 1.3E-14 4.3E-19 135.1 2.2 146 55-208 17-166 (211)
253 1f60_A Elongation factor EEF1A 99.4 1.7E-13 5.9E-18 142.3 9.7 148 282-441 5-202 (458)
254 2be4_A Hypothetical protein LO 99.4 1.7E-14 5.8E-19 139.0 1.3 146 57-208 104-271 (272)
255 4fid_A G protein alpha subunit 99.4 6.6E-13 2.3E-17 131.2 12.6 122 323-451 153-328 (340)
256 1ij5_A Plasmodial specific LAV 99.4 4.5E-14 1.5E-18 140.1 4.2 131 54-205 185-318 (323)
257 1bjf_A Neurocalcin delta; calc 99.4 5.8E-14 2E-18 128.2 4.4 144 58-208 26-178 (193)
258 1h65_A Chloroplast outer envel 99.4 1.9E-12 6.5E-17 125.2 14.7 124 282-410 37-170 (270)
259 2elf_A Protein translation elo 99.4 3.6E-13 1.2E-17 135.9 9.8 145 286-451 23-180 (370)
260 1u0l_A Probable GTPase ENGC; p 99.4 1.5E-13 5.2E-18 135.0 6.2 133 299-447 32-169 (301)
261 1ij5_A Plasmodial specific LAV 99.4 5.2E-14 1.8E-18 139.7 2.3 136 49-205 114-251 (323)
262 2h5e_A Peptide chain release f 99.4 1.8E-12 6.1E-17 136.6 14.0 117 282-409 11-149 (529)
263 1r5b_A Eukaryotic peptide chai 99.4 2.6E-13 9.1E-18 141.3 7.5 150 281-442 40-243 (467)
264 3bow_A Calpain-2 catalytic sub 99.4 1.7E-13 5.7E-18 150.0 6.0 160 49-233 523-692 (714)
265 2l4h_A Calcium and integrin-bi 99.4 9.8E-14 3.4E-18 129.4 3.5 148 49-207 43-204 (214)
266 3mca_A HBS1, elongation factor 99.4 7.2E-14 2.5E-18 149.3 2.2 158 281-448 174-394 (592)
267 1wxq_A GTP-binding protein; st 99.4 9.4E-13 3.2E-17 133.9 9.1 86 285-371 1-114 (397)
268 3t34_A Dynamin-related protein 99.4 6.4E-13 2.2E-17 134.0 7.7 156 282-446 32-256 (360)
269 1dar_A EF-G, elongation factor 99.4 3.3E-12 1.1E-16 139.0 13.6 116 281-409 9-144 (691)
270 1sjj_A Actinin; 3-helix bundle 99.4 4.3E-13 1.5E-17 150.7 6.3 140 48-208 716-862 (863)
271 3def_A T7I23.11 protein; chlor 99.3 6.2E-12 2.1E-16 121.0 13.4 124 282-409 34-166 (262)
272 4a9a_A Ribosome-interacting GT 99.3 5.4E-11 1.8E-15 119.3 19.3 120 281-406 69-194 (376)
273 2qag_C Septin-7; cell cycle, c 99.3 3.3E-12 1.1E-16 130.3 9.9 159 283-449 30-225 (418)
274 2qnr_A Septin-2, protein NEDD5 99.3 1.8E-12 6.3E-17 127.1 7.3 161 283-451 17-214 (301)
275 2xex_A Elongation factor G; GT 99.3 1.1E-11 3.9E-16 134.8 13.7 116 281-409 7-142 (693)
276 2x2e_A Dynamin-1; nitration, h 99.3 5.9E-13 2E-17 133.8 2.7 156 282-447 29-254 (353)
277 2lv7_A Calcium-binding protein 99.3 3.5E-12 1.2E-16 103.6 6.7 72 48-125 27-98 (100)
278 2wsm_A Hydrogenase expression/ 99.3 2.1E-12 7.1E-17 120.7 6.2 153 283-451 29-214 (221)
279 2rdo_7 EF-G, elongation factor 99.3 4.9E-11 1.7E-15 130.0 17.3 120 281-409 7-149 (704)
280 1cip_A Protein (guanine nucleo 99.3 1.1E-11 3.7E-16 123.9 9.9 131 314-453 178-346 (353)
281 1djx_A PLC-D1, phosphoinositid 99.3 4E-13 1.4E-17 144.0 -0.8 132 57-205 11-149 (624)
282 1jal_A YCHF protein; nucleotid 99.3 1.2E-11 3.9E-16 123.4 9.8 148 285-435 3-240 (363)
283 2www_A Methylmalonic aciduria 99.2 1.5E-11 5.1E-16 123.2 9.7 154 281-450 71-278 (349)
284 2hf9_A Probable hydrogenase ni 99.2 1.1E-13 3.8E-18 129.9 -5.5 57 394-450 164-223 (226)
285 3p32_A Probable GTPase RV1496/ 99.2 1.4E-11 4.7E-16 123.9 9.2 103 333-451 172-284 (355)
286 2qpt_A EH domain-containing pr 99.2 1.3E-11 4.3E-16 130.8 8.7 122 282-412 63-236 (550)
287 4drw_A Protein S100-A10/annexi 99.2 2.4E-11 8.1E-16 101.7 8.5 69 53-127 11-83 (121)
288 1zcb_A G alpha I/13; GTP-bindi 99.2 6E-11 2.1E-15 118.9 10.7 150 293-451 156-353 (362)
289 2xtz_A Guanine nucleotide-bind 99.2 4.9E-11 1.7E-15 119.1 9.5 115 332-450 182-344 (354)
290 2dby_A GTP-binding protein; GD 99.2 5.1E-11 1.7E-15 119.5 9.4 157 285-444 2-255 (368)
291 3fs7_A Parvalbumin, thymic; ca 99.2 2.2E-11 7.6E-16 100.2 5.4 102 86-204 2-108 (109)
292 1azs_C GS-alpha; complex (lyas 99.2 1.5E-10 5.2E-15 116.9 12.3 127 315-450 203-384 (402)
293 2pvb_A Protein (parvalbumin); 99.2 3.2E-11 1.1E-15 99.1 5.9 101 86-204 2-107 (108)
294 1qxp_A MU-like calpain; M-calp 99.1 3.9E-12 1.3E-16 143.2 0.2 135 50-205 526-670 (900)
295 2d8n_A Recoverin; structural g 99.1 1E-11 3.5E-16 114.6 2.8 158 65-237 7-183 (207)
296 3zvr_A Dynamin-1; hydrolase, D 99.1 6.7E-11 2.3E-15 128.1 9.1 157 282-448 49-275 (772)
297 2jjz_A Ionized calcium-binding 99.1 1.4E-10 4.7E-15 101.6 9.1 89 53-152 46-134 (150)
298 3nso_A Protein S100-A3; EF-han 99.1 1.7E-10 5.8E-15 93.5 8.8 71 53-128 6-82 (101)
299 1pva_A Parvalbumin; calcium bi 99.1 2E-11 6.9E-16 100.6 3.1 105 86-204 2-108 (110)
300 1qxp_A MU-like calpain; M-calp 99.1 1.4E-10 4.8E-15 130.5 10.9 84 56-152 606-689 (900)
301 2zkm_X 1-phosphatidylinositol- 99.1 3.3E-11 1.1E-15 132.2 5.0 142 55-206 144-298 (799)
302 2kn2_A Calmodulin; S MAPK phos 99.1 3.1E-10 1.1E-14 90.2 9.4 87 50-142 2-91 (92)
303 1bu3_A Calcium-binding protein 99.1 3.7E-11 1.3E-15 98.9 3.6 102 86-204 2-108 (109)
304 2p67_A LAO/AO transport system 99.1 1.1E-10 3.9E-15 116.5 7.7 102 333-450 149-260 (341)
305 2h2k_A Protein S100-A13; calci 99.1 1.3E-10 4.6E-15 95.1 6.6 84 42-130 7-93 (106)
306 2ktg_A Calmodulin, putative; e 99.1 2.8E-10 9.5E-15 89.0 7.8 76 48-129 5-80 (85)
307 1wy9_A Allograft inflammatory 99.1 1E-10 3.5E-15 102.1 5.7 92 49-152 41-132 (147)
308 2i7a_A Calpain 13; calcium-dep 99.1 2.6E-10 8.8E-15 102.5 8.4 84 56-154 75-162 (174)
309 1rro_A RAT oncomodulin; calciu 99.1 9.1E-11 3.1E-15 96.4 5.0 104 87-204 2-107 (108)
310 5pal_A Parvalbumin; calcium-bi 99.1 4.2E-11 1.4E-15 98.6 2.7 101 87-204 2-107 (109)
311 3n22_A Protein S100-A2; EF-han 99.1 6.3E-10 2.1E-14 89.7 9.4 70 53-127 7-82 (98)
312 2lnk_A Protein S100-A4; EF-han 99.1 6.5E-10 2.2E-14 91.9 9.5 72 51-127 16-93 (113)
313 2opo_A Polcalcin CHE A 3; calc 99.0 3E-10 1E-14 89.1 7.1 72 49-127 3-74 (86)
314 1n0u_A EF-2, elongation factor 99.0 4E-10 1.4E-14 125.1 10.6 117 282-407 17-163 (842)
315 1y1x_A Leishmania major homolo 99.0 3.1E-10 1E-14 103.5 8.0 122 57-203 63-187 (191)
316 4eto_A Protein S100-A4; calciu 99.0 7.1E-10 2.4E-14 88.5 9.1 70 53-127 6-81 (93)
317 1yrb_A ATP(GTP)binding protein 99.0 1.2E-09 4.2E-14 104.5 12.5 111 333-450 109-256 (262)
318 3zwh_A Protein S100-A4; Ca-bin 99.0 7.9E-10 2.7E-14 90.1 9.3 70 53-127 9-84 (104)
319 1fi6_A EH domain protein REPS1 99.0 4.6E-10 1.6E-14 89.5 7.6 70 50-127 2-71 (92)
320 2joj_A Centrin protein; N-term 99.0 4.3E-10 1.5E-14 86.0 7.1 73 51-129 1-73 (77)
321 1avs_A Troponin C; muscle cont 99.0 7.4E-10 2.5E-14 87.7 8.5 76 48-129 11-86 (90)
322 2znd_A Programmed cell death p 99.0 1.3E-09 4.5E-14 97.2 11.0 88 56-155 73-160 (172)
323 1bjf_A Neurocalcin delta; calc 99.0 3.9E-10 1.3E-14 102.5 7.4 117 58-194 64-193 (193)
324 1xk4_C Calgranulin B; S100 fam 99.0 9.4E-10 3.2E-14 91.3 9.1 88 53-151 8-102 (113)
325 1j7q_A CAVP, calcium vector pr 99.0 6.5E-10 2.2E-14 87.2 7.5 75 48-129 5-82 (86)
326 1rwy_A Parvalbumin alpha; EF-h 99.0 4.4E-11 1.5E-15 98.4 0.6 101 87-204 2-107 (109)
327 2kyc_A Parvalbumin-3, parvalbu 99.0 7E-11 2.4E-15 97.0 1.7 101 87-204 2-107 (108)
328 1c07_A Protein (epidermal grow 99.0 5.2E-10 1.8E-14 89.8 6.7 70 50-127 3-72 (95)
329 3nxa_A Protein S100-A16; S100 99.0 1.7E-09 5.9E-14 87.5 9.6 72 53-129 7-85 (100)
330 2kgr_A Intersectin-1; structur 99.0 1E-09 3.5E-14 90.8 7.8 72 48-127 5-76 (111)
331 1alv_A Calpain, S-camld; calci 99.0 1.3E-09 4.4E-14 97.4 9.1 86 57-155 77-162 (173)
332 1k94_A Grancalcin; penta-EF-ha 99.0 1.4E-09 4.8E-14 96.3 9.2 87 56-157 69-155 (165)
333 3vqt_A RF-3, peptide chain rel 99.0 6.4E-09 2.2E-13 109.9 15.1 113 284-409 31-167 (548)
334 2y5i_A S100Z, S100 calcium bin 98.9 2.4E-09 8.2E-14 86.5 8.8 71 53-128 6-82 (99)
335 1j55_A S-100P protein; metal b 98.9 2E-09 6.7E-14 86.4 7.7 70 53-127 5-80 (95)
336 1gjy_A Sorcin, CP-22, V19; cal 98.9 2E-09 7E-14 95.5 8.1 85 57-155 72-156 (167)
337 2pmy_A RAS and EF-hand domain- 98.9 1.9E-09 6.4E-14 85.7 6.7 72 48-127 18-89 (91)
338 1eh2_A EPS15; calcium binding, 98.9 3.8E-09 1.3E-13 86.4 8.4 70 49-127 7-76 (106)
339 1iq3_A Ralbp1-interacting prot 98.9 4.6E-10 1.6E-14 92.6 2.9 77 43-127 8-84 (110)
340 2qm8_A GTPase/ATPase; G protei 98.9 4E-09 1.4E-13 104.9 10.0 154 281-450 52-260 (337)
341 2wcb_A Protein S100-A12; calci 98.9 1.2E-09 4.1E-14 87.7 4.8 71 52-127 7-83 (95)
342 2l2e_A Calcium-binding protein 98.9 1.7E-09 5.7E-14 98.0 5.6 153 69-236 3-172 (190)
343 1juo_A Sorcin; calcium-binding 98.9 6.5E-09 2.2E-13 95.0 9.6 86 56-155 102-187 (198)
344 3sjs_A URE3-BP sequence specif 98.9 2.2E-09 7.5E-14 100.2 6.1 121 58-204 88-216 (220)
345 3rm1_A Protein S100-B; alpha-h 98.9 1.2E-08 4E-13 81.3 9.5 70 53-128 5-81 (92)
346 2kax_A Protein S100-A5; EF-han 98.8 3.7E-09 1.3E-13 84.2 6.4 70 53-128 6-79 (92)
347 2kz2_A Calmodulin, CAM; TR2C, 98.8 1.1E-08 3.9E-13 81.7 9.0 66 55-126 27-92 (94)
348 1k2h_A S100A1, S-100 protein, 98.8 1.2E-08 4.1E-13 81.0 9.0 71 53-128 5-81 (93)
349 3h4s_E KCBP interacting Ca2+-b 98.8 4.8E-10 1.6E-14 96.2 0.6 97 97-206 6-106 (135)
350 2yv5_A YJEQ protein; hydrolase 98.8 5.9E-09 2E-13 102.1 7.7 93 345-446 68-164 (302)
351 1qjt_A EH1, epidermal growth f 98.8 4.2E-09 1.4E-13 85.1 5.2 67 54-128 8-74 (99)
352 1yx7_A Calsensin, LAN3-6 antig 98.8 2.7E-09 9.3E-14 82.9 3.9 72 52-129 2-79 (83)
353 2ohf_A Protein OLA1, GTP-bindi 98.8 2.2E-09 7.6E-14 108.0 4.0 94 281-374 19-132 (396)
354 1xk4_A Calgranulin A; S100 fam 98.8 6E-09 2E-13 83.1 5.7 70 53-127 6-77 (93)
355 2d58_A Allograft inflammatory 98.8 1.2E-08 4.2E-13 83.5 7.6 71 49-126 25-95 (107)
356 1psr_A Psoriasin, S100A7; EF-h 98.8 5.2E-09 1.8E-13 84.7 5.2 69 53-127 6-80 (100)
357 1tiz_A Calmodulin-related prot 98.8 6.6E-09 2.2E-13 76.9 5.4 63 58-126 2-64 (67)
358 3j25_A Tetracycline resistance 98.8 2.7E-09 9.3E-14 115.1 4.5 114 285-409 3-134 (638)
359 1a4p_A S100A10; S100 family, E 98.8 1.1E-08 3.9E-13 82.0 6.7 70 53-128 5-78 (96)
360 2lmt_A Calmodulin-related prot 98.7 1.3E-08 4.5E-13 88.4 7.1 64 57-126 83-146 (148)
361 2jq6_A EH domain-containing pr 98.7 9.4E-09 3.2E-13 87.8 6.0 67 52-127 46-112 (139)
362 2r2i_A Guanylyl cyclase-activa 98.7 1.8E-08 6.3E-13 91.9 8.4 99 53-157 48-153 (198)
363 1k9u_A Polcalcin PHL P 7; poll 98.7 2E-08 6.9E-13 76.9 7.3 64 57-127 3-66 (78)
364 2b1u_A Calmodulin-like protein 98.7 9.2E-09 3.2E-13 77.1 4.5 64 56-125 5-68 (71)
365 3i5g_B Myosin regulatory light 98.7 1.1E-08 3.6E-13 89.8 5.6 63 57-126 85-147 (153)
366 2kld_A Polycystin-2; PC2, PKD2 98.7 4.2E-10 1.4E-14 95.0 -3.4 100 85-206 3-109 (123)
367 3a4u_B Multiple coagulation fa 98.7 2.9E-09 9.9E-14 92.3 1.7 111 54-203 24-142 (143)
368 3li6_A Calcium-binding protein 98.7 6.9E-09 2.4E-13 76.6 3.4 63 58-126 1-63 (66)
369 1ni3_A YCHF GTPase, YCHF GTP-b 98.7 1.3E-07 4.3E-12 95.4 13.5 90 281-370 17-127 (392)
370 1k8u_A S100A6, calcyclin, CACY 98.7 2.1E-08 7.2E-13 79.0 6.2 70 53-127 6-79 (90)
371 1cb1_A Calbindin D9K; calcium- 98.7 1.4E-08 4.6E-13 77.7 4.7 68 55-127 5-75 (78)
372 5pal_A Parvalbumin; calcium-bi 98.7 4E-08 1.4E-12 80.4 7.7 67 55-126 39-107 (109)
373 2lhi_A Calmodulin, serine/thre 98.7 4.1E-08 1.4E-12 88.1 8.3 64 56-126 83-146 (176)
374 1s6c_A KV4 potassium channel-i 98.7 1.3E-08 4.4E-13 91.5 5.0 148 74-236 1-165 (183)
375 3i5g_C Myosin catalytic light 98.7 3.9E-08 1.3E-12 86.8 7.7 66 57-126 85-150 (159)
376 1rwy_A Parvalbumin alpha; EF-h 98.7 2.9E-08 1E-12 81.2 6.5 67 55-126 39-107 (109)
377 1c7v_A CAVP, calcium vector pr 98.7 1.3E-08 4.3E-13 78.7 4.0 67 53-126 5-72 (81)
378 1s6j_A CDPK, calcium-dependent 98.7 6.2E-09 2.1E-13 81.6 1.9 67 51-123 17-83 (87)
379 1qx2_A Vitamin D-dependent cal 98.6 2.9E-08 9.9E-13 75.4 5.5 66 56-127 4-73 (76)
380 1pva_A Parvalbumin; calcium bi 98.6 2.3E-08 7.8E-13 82.0 5.3 67 55-126 40-108 (110)
381 2pvb_A Protein (parvalbumin); 98.6 3.7E-08 1.3E-12 80.5 6.6 67 55-126 39-107 (108)
382 2obh_A Centrin-2; DNA repair c 98.6 8.5E-08 2.9E-12 82.6 9.2 64 56-125 78-141 (143)
383 1wlz_A DJBP, CAP-binding prote 98.6 5E-08 1.7E-12 79.4 7.3 67 54-126 21-87 (105)
384 1bu3_A Calcium-binding protein 98.6 2.9E-08 1E-12 81.2 5.9 66 55-125 40-107 (109)
385 3ohm_B 1-phosphatidylinositol- 98.6 6.7E-09 2.3E-13 114.1 2.3 139 56-205 149-301 (885)
386 3fs7_A Parvalbumin, thymic; ca 98.6 3.4E-08 1.2E-12 80.9 5.9 66 55-125 40-107 (109)
387 3h4s_E KCBP interacting Ca2+-b 98.6 8.6E-08 3E-12 82.0 8.7 69 54-128 37-106 (135)
388 3h2y_A GTPase family protein; 98.6 4.5E-08 1.5E-12 98.4 8.0 122 342-474 55-183 (368)
389 4fn5_A EF-G 1, elongation fact 98.6 6.3E-07 2.1E-11 97.9 17.4 118 282-408 11-151 (709)
390 1fpw_A Yeast frequenin, calciu 98.6 4.1E-08 1.4E-12 88.7 6.6 94 58-157 64-169 (190)
391 3fia_A Intersectin-1; EH 1 dom 98.6 8.7E-08 3E-12 79.4 7.9 74 45-127 21-94 (121)
392 2ggz_A Guanylyl cyclase-activa 98.6 7.4E-08 2.5E-12 88.9 8.3 128 53-206 53-187 (211)
393 1qls_A S100C protein, calgizza 98.6 6.4E-08 2.2E-12 77.8 6.7 70 53-127 9-84 (99)
394 2aao_A CDPK, calcium-dependent 98.6 5.7E-08 2E-12 85.6 6.9 139 89-238 19-160 (166)
395 1s1e_A KV channel interacting 98.6 3.7E-08 1.3E-12 92.0 5.6 153 70-237 30-199 (224)
396 2ehb_A Calcineurin B-like prot 98.6 2.5E-08 8.6E-13 91.6 4.3 157 68-236 11-180 (207)
397 3l82_B F-box only protein 4; T 98.6 8.5E-08 2.9E-12 86.9 7.5 104 342-452 111-224 (227)
398 1g8i_A Frequenin, neuronal cal 98.6 7E-08 2.4E-12 87.1 6.9 152 70-236 4-172 (190)
399 3bow_A Calpain-2 catalytic sub 98.6 3.8E-08 1.3E-12 107.6 6.0 121 59-205 577-698 (714)
400 1rro_A RAT oncomodulin; calciu 98.6 2.8E-08 9.6E-13 81.2 3.7 66 55-125 39-106 (108)
401 3dd4_A KV channel-interacting 98.6 9.9E-08 3.4E-12 89.4 7.7 111 59-188 104-227 (229)
402 2lv7_A Calcium-binding protein 98.5 8.1E-09 2.8E-13 83.5 -0.2 63 135-205 36-100 (100)
403 1jba_A GCAP-2, protein (guanyl 98.5 1.5E-07 5.2E-12 86.1 8.3 94 58-157 60-170 (204)
404 1exr_A Calmodulin; high resolu 98.5 2.7E-07 9.3E-12 79.7 9.2 65 56-126 82-146 (148)
405 1h8b_A ACT-EF34, alpha-actinin 98.5 1.7E-07 6E-12 71.0 6.7 61 56-126 9-70 (75)
406 3ec1_A YQEH GTPase; atnos1, at 98.5 1E-07 3.5E-12 95.9 6.9 123 341-474 56-185 (369)
407 3khe_A Calmodulin-like domain 98.5 9.1E-08 3.1E-12 86.4 5.8 132 93-238 39-184 (191)
408 2sas_A Sarcoplasmic calcium-bi 98.5 8E-08 2.7E-12 86.0 5.2 135 95-236 9-164 (185)
409 3ox6_A Calcium-binding protein 98.5 2.3E-07 7.9E-12 80.1 7.9 65 56-125 87-151 (153)
410 2jul_A Calsenilin; EF-hand, ca 98.5 1.2E-07 4E-12 90.5 6.3 94 58-157 130-235 (256)
411 3k21_A PFCDPK3, calcium-depend 98.5 1E-07 3.6E-12 86.6 5.4 140 86-236 41-188 (191)
412 3a8r_A Putative uncharacterize 98.5 1.3E-07 4.4E-12 85.1 5.9 67 55-126 96-169 (179)
413 3j04_B Myosin regulatory light 98.5 1.9E-07 6.6E-12 79.9 6.1 64 57-126 76-139 (143)
414 1snl_A Nucleobindin 1, calnuc; 98.5 1.8E-07 6.1E-12 76.0 5.5 64 58-126 21-99 (103)
415 2ovk_C Myosin catalytic light 98.4 2.5E-07 8.5E-12 80.9 6.9 64 57-126 85-150 (159)
416 3pm8_A PFCDPK2, calcium-depend 98.4 3.1E-08 1.1E-12 90.6 0.9 139 89-237 49-193 (197)
417 2mys_B Myosin; muscle protein, 98.4 3.8E-07 1.3E-11 80.3 7.4 65 57-127 95-159 (166)
418 2ct9_A Calcium-binding protein 98.4 3E-07 1E-11 84.5 6.7 67 55-126 111-181 (208)
419 2bl0_C Myosin regulatory light 98.4 3.4E-07 1.2E-11 78.2 6.5 94 58-157 43-136 (142)
420 1jfj_A Ehcabp, calcium-binding 98.4 3.1E-08 1.1E-12 83.6 -0.1 130 96-236 2-132 (134)
421 3u0k_A Rcamp; fluorescent prot 98.4 3.9E-07 1.3E-11 91.2 7.7 64 57-126 375-438 (440)
422 1nya_A Calerythrin; EF-hand, m 98.4 3E-07 1E-11 81.6 6.2 98 53-157 54-158 (176)
423 2jnf_A Troponin C; stretch act 98.4 4.5E-07 1.5E-11 79.0 7.1 95 58-157 51-149 (158)
424 1m45_A MLC1P, myosin light cha 98.4 3E-07 1E-11 79.2 5.1 64 57-126 83-146 (148)
425 2kyc_A Parvalbumin-3, parvalbu 98.4 7.5E-08 2.6E-12 78.6 1.1 65 57-126 41-107 (108)
426 2bec_A Calcineurin B homologou 98.4 4.1E-07 1.4E-11 83.1 6.1 69 53-126 110-182 (202)
427 1uhk_A Aequorin 2, aequorin; E 98.3 8.1E-07 2.8E-11 79.9 7.9 64 61-130 113-176 (191)
428 3e3r_A Calcyphosin, calcyphosi 98.3 2.2E-07 7.5E-12 84.8 4.1 135 94-240 37-182 (204)
429 1q80_A SCP, sarcoplasmic calci 98.3 1.3E-06 4.6E-11 77.2 9.2 67 55-129 92-158 (174)
430 3ll8_B Calcineurin subunit B t 98.3 9E-07 3.1E-11 76.6 7.7 95 58-157 39-138 (155)
431 3qrx_A Centrin; calcium-bindin 98.3 2.5E-07 8.7E-12 81.6 4.2 95 58-157 65-159 (169)
432 2mys_C Myosin; muscle protein, 98.3 6.8E-07 2.3E-11 76.8 6.8 65 55-126 83-147 (149)
433 1top_A Troponin C; contractIle 98.3 1.4E-06 4.8E-11 76.0 8.9 66 55-126 94-159 (162)
434 1wdc_C Scallop myosin; calcium 98.3 5.9E-07 2E-11 78.1 6.4 65 57-127 84-150 (156)
435 2bl0_B Myosin regulatory light 98.3 4.2E-07 1.5E-11 77.8 5.3 66 55-126 74-139 (145)
436 2lvv_A Flagellar calcium-bindi 98.3 5.5E-07 1.9E-11 84.1 6.4 138 87-236 41-195 (226)
437 2qac_A Myosin A tail domain in 98.3 7.6E-07 2.6E-11 76.5 6.6 62 56-125 83-144 (146)
438 3mse_B Calcium-dependent prote 98.3 1E-07 3.5E-12 85.6 1.0 125 96-236 41-175 (180)
439 1qv0_A Obelin, OBL; photoprote 98.3 9.5E-07 3.2E-11 79.8 7.5 64 61-130 117-180 (195)
440 3fwb_A Cell division control p 98.3 4.5E-07 1.6E-11 79.1 5.2 95 58-157 60-154 (161)
441 2ccm_A Calexcitin; EF hand, ca 98.3 2.5E-06 8.5E-11 76.9 10.2 70 53-130 105-174 (191)
442 3qr0_A Phospholipase C-beta (P 98.3 2.3E-07 7.9E-12 101.4 3.2 131 65-205 163-308 (816)
443 3l2o_B F-box only protein 4; s 98.3 5.1E-07 1.7E-11 85.9 5.1 103 342-452 196-309 (312)
444 3dtp_E RLC, myosin regulatory 98.3 4.9E-07 1.7E-11 82.3 4.9 63 57-126 126-188 (196)
445 1ggw_A Protein (CDC4P); light 98.3 1.4E-06 4.9E-11 74.1 7.4 64 56-126 75-138 (140)
446 2f2o_A Calmodulin fused with c 98.3 4.3E-07 1.5E-11 81.0 4.2 95 58-157 48-142 (179)
447 2ovk_B RLC, myosin regulatory 98.3 1.2E-06 4.1E-11 75.9 6.9 63 57-126 85-147 (153)
448 1dtl_A Cardiac troponin C; hel 98.3 3.6E-07 1.2E-11 79.9 3.5 95 58-157 56-153 (161)
449 2j37_W Signal recognition part 98.3 7.5E-07 2.6E-11 92.6 6.4 153 282-448 99-310 (504)
450 1w7j_B Myosin light chain 1; m 98.3 2.8E-07 9.5E-12 79.7 2.7 63 56-125 86-148 (151)
451 3akb_A Putative calcium bindin 98.3 2.2E-06 7.5E-11 75.0 8.5 65 57-129 98-162 (166)
452 3a4u_B Multiple coagulation fa 98.3 4E-07 1.4E-11 78.7 3.5 64 57-125 68-142 (143)
453 3cs1_A Flagellar calcium-bindi 98.3 3.2E-07 1.1E-11 85.2 3.1 156 67-236 22-192 (219)
454 1s6i_A CDPK, calcium-dependent 98.3 3.5E-08 1.2E-12 89.5 -3.4 128 96-236 12-141 (188)
455 4ds7_A Calmodulin, CAM; protei 98.3 4.1E-07 1.4E-11 78.0 3.5 93 59-157 49-141 (147)
456 3mwu_A Calmodulin-domain prote 98.3 7.6E-07 2.6E-11 93.0 6.1 136 92-236 326-478 (486)
457 2hpk_A Photoprotein berovin; s 98.2 1.8E-06 6.2E-11 79.1 7.7 65 59-131 130-194 (208)
458 1s6j_A CDPK, calcium-dependent 98.2 4.1E-08 1.4E-12 76.8 -3.1 81 113-203 3-85 (87)
459 3h2y_A GTPase family protein; 98.2 6.7E-08 2.3E-12 97.2 -2.6 137 285-435 161-313 (368)
460 3ec1_A YQEH GTPase; atnos1, at 98.2 9.2E-08 3.2E-12 96.2 -1.7 139 286-438 164-318 (369)
461 2kz2_A Calmodulin, CAM; TR2C, 98.2 1.9E-07 6.7E-12 74.4 0.6 81 116-204 9-92 (94)
462 3lij_A Calcium/calmodulin depe 98.2 3.6E-07 1.2E-11 95.7 2.8 135 91-236 340-485 (494)
463 2l4h_A Calcium and integrin-bi 98.2 3E-06 1E-10 78.3 8.7 93 60-157 94-196 (214)
464 1wdc_B Scallop myosin; calcium 98.2 1.7E-06 5.8E-11 75.2 6.6 63 57-126 87-149 (156)
465 2qag_B Septin-6, protein NEDD5 98.2 4.7E-06 1.6E-10 84.6 10.5 144 283-435 41-219 (427)
466 3q5i_A Protein kinase; CDPK, m 98.2 7.4E-07 2.5E-11 93.6 4.7 134 92-236 350-494 (504)
467 1puj_A YLQF, conserved hypothe 98.2 2E-06 6.8E-11 83.1 7.0 98 339-450 5-105 (282)
468 3nso_A Protein S100-A3; EF-han 98.2 1.7E-07 5.7E-12 75.7 -0.9 68 135-205 10-81 (101)
469 2zfd_A Calcineurin B-like prot 98.1 1.2E-06 4.2E-11 81.6 4.3 106 47-157 63-188 (226)
470 1qjt_A EH1, epidermal growth f 98.1 6.2E-07 2.1E-11 72.2 1.8 65 132-205 8-73 (99)
471 2jjz_A Ionized calcium-binding 98.1 1.1E-07 3.7E-12 83.0 -3.3 110 71-206 2-115 (150)
472 3nxa_A Protein S100-A16; S100 98.1 6E-07 2.1E-11 72.4 1.4 68 135-205 11-83 (100)
473 2hps_A Coelenterazine-binding 98.1 6.7E-06 2.3E-10 73.6 8.3 69 57-131 100-170 (186)
474 3li6_A Calcium-binding protein 98.1 6E-07 2.1E-11 65.9 1.0 61 137-205 2-64 (66)
475 1tiz_A Calmodulin-related prot 98.1 3.7E-07 1.3E-11 67.2 -0.2 62 135-204 1-64 (67)
476 1dgu_A Calcium-saturated CIB; 98.1 2.5E-06 8.4E-11 76.4 5.2 92 61-157 64-165 (183)
477 1wlz_A DJBP, CAP-binding prote 98.1 1.2E-06 4.1E-11 71.0 2.6 82 115-205 5-88 (105)
478 3n22_A Protein S100-A2; EF-han 98.1 5.6E-07 1.9E-11 72.3 0.2 68 135-205 11-82 (98)
479 3nyv_A Calmodulin-domain prote 98.1 1.9E-06 6.4E-11 90.0 4.2 93 57-157 382-474 (484)
480 1tq4_A IIGP1, interferon-induc 98.1 3.4E-05 1.2E-09 78.2 13.3 153 283-449 68-251 (413)
481 3zwh_A Protein S100-A4; Ca-bin 98.0 4.6E-07 1.6E-11 73.6 -0.8 68 135-205 13-84 (104)
482 2lnk_A Protein S100-A4; EF-han 98.0 7.6E-07 2.6E-11 73.4 0.4 68 135-205 22-93 (113)
483 4eto_A Protein S100-A4; calciu 98.0 5.2E-07 1.8E-11 71.7 -0.6 68 135-205 10-81 (93)
484 3rm1_A Protein S100-B; alpha-h 98.0 7.6E-07 2.6E-11 70.6 0.3 67 135-205 9-80 (92)
485 4drw_A Protein S100-A10/annexi 98.0 5.1E-07 1.7E-11 75.3 -0.8 67 135-205 15-83 (121)
486 1eg3_A Dystrophin; EF-hand lik 98.0 2.6E-05 8.9E-10 73.5 10.3 112 58-208 133-245 (261)
487 2opo_A Polcalcin CHE A 3; calc 98.0 1.1E-06 3.8E-11 68.3 0.4 66 135-208 11-77 (86)
488 1c07_A Protein (epidermal grow 98.0 8.1E-07 2.8E-11 70.9 -0.4 61 135-204 10-71 (95)
489 3sop_A Neuronal-specific septi 98.0 1.4E-05 4.7E-10 76.7 8.1 62 357-426 110-175 (270)
490 2b1u_A Calmodulin-like protein 98.0 6E-07 2.1E-11 66.9 -1.2 63 134-204 5-69 (71)
491 1fi6_A EH domain protein REPS1 98.0 7.5E-07 2.6E-11 70.6 -0.8 62 135-205 9-71 (92)
492 3sg6_A Gcamp2, myosin light ch 97.9 8.7E-06 3E-10 83.1 6.2 95 58-157 349-443 (450)
493 1iq3_A Ralbp1-interacting prot 97.9 7.7E-07 2.6E-11 73.1 -1.7 63 134-205 21-84 (110)
494 2joj_A Centrin protein; N-term 97.9 1.3E-06 4.6E-11 66.2 -0.5 63 135-205 7-71 (77)
495 1h8b_A ACT-EF34, alpha-actinin 97.9 7.8E-06 2.7E-10 61.8 3.8 59 133-206 8-72 (75)
496 1j55_A S-100P protein; metal b 97.9 1.6E-06 5.6E-11 69.1 -0.1 67 135-204 9-79 (95)
497 1xk4_A Calgranulin A; S100 fam 97.9 2.7E-06 9.2E-11 67.4 0.8 64 135-205 10-77 (93)
498 1c7v_A CAVP, calcium vector pr 97.9 1.3E-06 4.5E-11 67.0 -1.0 65 133-206 7-74 (81)
499 2y5i_A S100Z, S100 calcium bin 97.9 1.6E-06 5.6E-11 69.7 -0.5 68 135-205 10-81 (99)
500 1k9u_A Polcalcin PHL P 7; poll 97.9 1.1E-06 3.9E-11 66.9 -1.5 65 135-207 3-68 (78)
No 1
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=99.96 E-value=1.8e-28 Score=229.79 Aligned_cols=163 Identities=20% Similarity=0.346 Sum_probs=136.1
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
+.+||+|+|++|||||||+++|+.+.|...+.||++.++..+.+.+++....+.+||++|++.+..+. ..+++.+|++
T Consensus 12 k~~KivlvGd~~VGKTsLi~r~~~~~f~~~~~~Tig~d~~~k~~~~~~~~v~l~iwDtaGqe~~~~l~--~~~~~~a~~~ 89 (216)
T 4dkx_A 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGLERFRSLI--PSYIRDSAAA 89 (216)
T ss_dssp -CEEEEEECSTTSSHHHHHHHHHHSCCC----------CEEEEEECSSCEEEEEEECCSCTTTCGGGH--HHHHTTCSEE
T ss_pred CcEEEEEECcCCcCHHHHHHHHHhCCCCCCcCCccceEEEEEEEEecceEEEEEEEECCCchhhhhHH--HHHhccccEE
Confidence 45899999999999999999999999999999999988888888888666677899999999988887 5689999999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH-HHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ-DSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~-~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
++|||++++.||+.+..|+..+.... .+++|+++||||+|+...+++.. ++++++++++++ +++|||++ .||++
T Consensus 90 ilv~di~~~~Sf~~i~~~~~~i~~~~---~~~~piilVgNK~Dl~~~r~V~~~e~~~~a~~~~~~-~~e~SAktg~nV~e 165 (216)
T 4dkx_A 90 VVVYDITNVNSFQQTTKWIDDVRTER---GSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQ 165 (216)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHH---TTSSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEEEBTTTTBSHHH
T ss_pred EEEeecchhHHHHHHHHHHHHHHHhc---CCCCeEEEEeeccchHhcCcccHHHHhhHHHHhCCe-eEEEeCCCCcCHHH
Confidence 99999999999999999999987663 45899999999999988776654 899999999997 99999999 99999
Q ss_pred HHHHHHHHHhC
Q 010673 441 VFSRIIWAAEH 451 (504)
Q Consensus 441 l~~~l~~~~~~ 451 (504)
+|+.|++.+..
T Consensus 166 ~F~~i~~~i~~ 176 (216)
T 4dkx_A 166 LFRRVAAALPG 176 (216)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 2
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=99.93 E-value=6.4e-25 Score=205.79 Aligned_cols=169 Identities=17% Similarity=0.241 Sum_probs=138.2
Q ss_pred cccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccc
Q 010673 279 QTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALAS 358 (504)
Q Consensus 279 ~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ 358 (504)
......+||+|+|.+|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..+++.
T Consensus 22 ~~~~~~~ki~vvG~~~vGKSsL~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~ 98 (214)
T 3q3j_B 22 QPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYT-ACLETEEQRVELSLWDTSGSPYYDNVR--PLCYSD 98 (214)
T ss_dssp -----CEEEEEECSTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEEC--CEEEEEEEEECCSGGGTTTG--GGGCTT
T ss_pred CCccceEEEEEECcCCCCHHHHHHHHhcCCCCCCcCCeeeeeEE-EEEEECCEEEEEEEEECCCCHhHHHHH--HHHcCC
Confidence 34456799999999999999999999999998888889888764 456777555677889999998887776 558899
Q ss_pred ccEEEEEEeCCCcccHHH-HHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC------------c-cchHHHHHHHHHhC
Q 010673 359 CDVTIFVYDSSDEYSWKR-TKELLVEVARLGEDSGYGVPCLLIASKDDLKPY------------T-MAVQDSARVTQELG 424 (504)
Q Consensus 359 ad~iilV~D~s~~~s~~~-~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~------------~-~~~~~~~~~~~~~~ 424 (504)
+|++|+|||++++.+|.. +..|+..+... .+++|+++|+||+|+... + ...++..++++.++
T Consensus 99 ~d~~i~v~d~~~~~s~~~~~~~~~~~i~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 174 (214)
T 3q3j_B 99 SDAVLLCFDISRPETVDSALKKWRTEILDY----CPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLG 174 (214)
T ss_dssp CSEEEEEEETTCTHHHHHHHTHHHHHHHHH----CTTSEEEEEEECGGGGGCHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred CeEEEEEEECcCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEEChhhccchhhhhhhcccccCccCHHHHHHHHHHcC
Confidence 999999999999999998 68999999877 458999999999999753 2 33458899999999
Q ss_pred CCCeEEEeccc-cC-HHHHHHHHHHHHhCCCC
Q 010673 425 IEPPIPVSMKS-KD-LNNVFSRIIWAAEHPHL 454 (504)
Q Consensus 425 ~~~~~~vSak~-~g-i~el~~~l~~~~~~~~~ 454 (504)
+.++++|||++ .| |+++|+.|.+.+..+..
T Consensus 175 ~~~~~e~SA~~g~g~v~~lf~~l~~~~~~~~~ 206 (214)
T 3q3j_B 175 AEIYLEGSAFTSEKSIHSIFRTASMLCLNKPS 206 (214)
T ss_dssp CSEEEECCTTTCHHHHHHHHHHHHHHHHC---
T ss_pred CCEEEEeccCCCcccHHHHHHHHHHHHhccCc
Confidence 94599999999 98 99999999999876544
No 3
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.5e-24 Score=196.45 Aligned_cols=164 Identities=24% Similarity=0.349 Sum_probs=139.5
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 6 ~~~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 83 (181)
T 3tw8_B 6 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTIT--STYYRGTH 83 (181)
T ss_dssp CCEEEEEEEECCTTSCHHHHHHHHCSCC---CCTTTBSEEEEEEEEEETTEEEEEEEEEETTGGGCSSCC--GGGGTTCS
T ss_pred cCcceEEEEECCCCCCHHHHHHHHhcCCCCCccCCCceeEEEEEEEEECCEEEEEEEEcCCCchhhhhhH--HHHhccCC
Confidence 4577999999999999999999999999888888888887887788887444567789999987776665 55889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++++|||++++.++..+..|+..+... ..++|+++|+||+|+...+... .....++..++++ ++++||++ .|+
T Consensus 84 ~~i~v~d~~~~~s~~~~~~~~~~~~~~----~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 158 (181)
T 3tw8_B 84 GVIVVYDVTSAESFVNVKRWLHEINQN----CDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQ-LFETSAKENVNV 158 (181)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHH----CTTSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCC-EEECBTTTTBSH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHh----CCCCCEEEEEECCCCchhcccCHHHHHHHHHHcCCe-EEEEECCCCCCH
Confidence 999999999999999999999999876 4589999999999998766554 4788899999986 99999999 999
Q ss_pred HHHHHHHHHHHhC
Q 010673 439 NNVFSRIIWAAEH 451 (504)
Q Consensus 439 ~el~~~l~~~~~~ 451 (504)
++++++|.+.+..
T Consensus 159 ~~l~~~l~~~~~~ 171 (181)
T 3tw8_B 159 EEMFNCITELVLR 171 (181)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988743
No 4
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=99.92 E-value=2.8e-24 Score=197.77 Aligned_cols=166 Identities=19% Similarity=0.258 Sum_probs=140.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++..+.. .+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 20 ~~~~~ki~~vG~~~~GKSsl~~~l~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 96 (194)
T 3reg_A 20 GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSH-VMKYKNEEFILHLWDTAGQEEYDRLR--PLSYADSD 96 (194)
T ss_dssp -CEEEEEEEECSTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEE-EEEETTEEEEEEEEEECCSGGGTTTG--GGGCTTCS
T ss_pred cceeeEEEEECcCCCCHHHHHHHHhcCCCCCccCCeeeeeeEE-EEEECCEEEEEEEEECCCcHHHHHHh--HhhccCCc
Confidence 4677999999999999999999999999888888888876654 46666444556789999998877766 56889999
Q ss_pred EEEEEEeCCCcccHHHH-HHHHHHHHHhccCCCCCCcEEEEEECCCCCCC--c-cchHHHHHHHHHhCCCCeEEEeccc-
Q 010673 361 VTIFVYDSSDEYSWKRT-KELLVEVARLGEDSGYGVPCLLIASKDDLKPY--T-MAVQDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~-~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~--~-~~~~~~~~~~~~~~~~~~~~vSak~- 435 (504)
++++|||++++.++..+ ..|+..+... ..++|+++|+||+|+... + ...++..++++.+++..++++||++
T Consensus 97 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 172 (194)
T 3reg_A 97 VVLLCFAVNNRTSFDNISTKWEPEIKHY----IDTAKTVLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAK 172 (194)
T ss_dssp EEEEEEETTCHHHHHHHHHTHHHHHHHH----CTTSEEEEEEECGGGCCTTTTCCCHHHHHHHHHHHTCSCEEECBTTTT
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEEChhhccCCCCcccHHHHHHHHHhcCCCEEEEeecCCC
Confidence 99999999999999997 7888888766 558999999999999753 2 3345889999999998799999999
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 010673 436 KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 436 ~gi~el~~~l~~~~~~~~ 453 (504)
.||+++|+.|.+.+...+
T Consensus 173 ~gi~~l~~~l~~~i~~~~ 190 (194)
T 3reg_A 173 IGLNEVFEKSVDCIFSNK 190 (194)
T ss_dssp BSHHHHHHHHHHHHHCSC
T ss_pred CCHHHHHHHHHHHHHhcC
Confidence 999999999999887654
No 5
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=99.92 E-value=2.6e-24 Score=192.88 Aligned_cols=163 Identities=25% Similarity=0.402 Sum_probs=133.7
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
..+||+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|++
T Consensus 2 ~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~d~~ 79 (170)
T 1g16_A 2 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTIT--TAYYRGAMGI 79 (170)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESSSCEEEEEEECCTTGGGTSCCC--HHHHTTEEEE
T ss_pred CceEEEEECcCCCCHHHHHHHHHhCCCCCCCCCccceeEEEEEEEECCEEEEEEEEeCCCChhhhhhH--HHHhccCCEE
Confidence 46899999999999999999999999887777888877887788888545667789999987766654 5688999999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNV 441 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~el 441 (504)
++|||++++.++..+..|+..+.... ..+.|+++|+||+|+.......+...++++.++++ ++++||++ .|++++
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gv~~l 155 (170)
T 1g16_A 80 ILVYDITDERTFTNIKQWFKTVNEHA---NDEAQLLLVGNKSDMETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEI 155 (170)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCTTCCSCHHHHHHHHHHHTCC-EEECBTTTTBSHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECccCCcCccCHHHHHHHHHHcCCe-EEEEECCCCCCHHHH
Confidence 99999999999999999999887753 34799999999999955444456888899999986 99999999 999999
Q ss_pred HHHHHHHHhC
Q 010673 442 FSRIIWAAEH 451 (504)
Q Consensus 442 ~~~l~~~~~~ 451 (504)
++.|.+.+..
T Consensus 156 ~~~l~~~~~~ 165 (170)
T 1g16_A 156 FFTLAKLIQE 165 (170)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 6
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=99.92 E-value=1.9e-24 Score=199.50 Aligned_cols=167 Identities=16% Similarity=0.228 Sum_probs=132.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhh-hhhhhhhcccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK-ILSNKEALASC 359 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~-~~~~~~~~~~a 359 (504)
....+||+|+|++|||||||+++|++......+.++++.++....+.+++....+.+||++|.+.+.. +. ..+++.+
T Consensus 20 ~~~~~ki~vvG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~Dt~g~~~~~~~~~--~~~~~~~ 97 (195)
T 3cbq_A 20 KDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQGDAGGWLR--DHCLQTG 97 (195)
T ss_dssp --CEEEEEEECSTTSSHHHHHHHTCCEECCGGGTTTSCTTEEEEEEEETTEEEEEEEECCCCCSGGGHHHH--HHHHHHC
T ss_pred CCcEEEEEEECCCCCCHHHHHHHHHhccCCccCCCCcccceEEEEEEECCEEEEEEEEecCCCccchhhhH--HHhhccC
Confidence 45679999999999999999999987655444445555555566677774445566788888866544 43 4577899
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cC
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~g 437 (504)
|++|+|||++++.+|..+..|+..+..... ..++|+++|+||+|+...+.+. ++..++++.++++ ++++||++ .|
T Consensus 98 d~~ilv~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~v~~~~~~~~a~~~~~~-~~e~Sa~~~~~ 174 (195)
T 3cbq_A 98 DAFLIVFSVTDRRSFSKVPETLLRLRAGRP--HHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCK-HIETSAALHHN 174 (195)
T ss_dssp SEEEEEEETTCHHHHHTHHHHHHHHHHHST--TSCCCEEEEEECTTCTTTCCSCHHHHHHHHHHTTCE-EEEEBTTTTBS
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEeechhccccCCcCHHHHHHHHHHhCCE-EEEEcCCCCCC
Confidence 999999999999999999999998876521 2479999999999998765543 4788899999886 99999999 99
Q ss_pred HHHHHHHHHHHHhCC
Q 010673 438 LNNVFSRIIWAAEHP 452 (504)
Q Consensus 438 i~el~~~l~~~~~~~ 452 (504)
++++|+.|++.+...
T Consensus 175 v~~lf~~l~~~i~~~ 189 (195)
T 3cbq_A 175 TRELFEGAVRQIRLR 189 (195)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988654
No 7
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=99.92 E-value=2e-24 Score=196.17 Aligned_cols=167 Identities=19% Similarity=0.279 Sum_probs=138.2
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|+++.+...+.+|++..+ ...+.+++....+.+||++|.+.+..+. ..+++.+|+
T Consensus 4 ~~~~ki~~~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~~~ 80 (181)
T 3t5g_A 4 SKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTAGQDEYSIFP--QTYSIDING 80 (181)
T ss_dssp EEEEEEEEEESTTSSHHHHHHHHHHSSCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCCCCTTCCCC--GGGTTTCSE
T ss_pred CceEEEEEECcCCCCHHHHHHHHHcCCCCCCCCCCccccE-EEEEEECCEEEEEEEEeCCCchhhhHHH--HHHHhcCCE
Confidence 3578999999999999999999999888888888888876 5556777444556789999987776555 458899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.+++.+..|+..+..... ..++|+++|+||+|+...+... ++..++++.++++ ++++||++ .|++
T Consensus 81 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~~v~ 157 (181)
T 3t5g_A 81 YILVYSVTSIKSFEVIKVIHGKLLDMVG--KVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAA-FLESSAKENQTAV 157 (181)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHC------CCEEEEEECTTCTTTCCSCHHHHHHHHHHTTCE-EEECCTTSHHHHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECccchhcceecHHHHHHHHHHhCCc-EEEEecCCCCCHH
Confidence 9999999999999999999998876532 3479999999999997766554 4889999999997 99999999 9999
Q ss_pred HHHHHHHHHHhCCCC
Q 010673 440 NVFSRIIWAAEHPHL 454 (504)
Q Consensus 440 el~~~l~~~~~~~~~ 454 (504)
++|+.|.+.+...+.
T Consensus 158 ~l~~~l~~~~~~~~~ 172 (181)
T 3t5g_A 158 DVFRRIILEAEKMDG 172 (181)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999876543
No 8
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=99.92 E-value=1.6e-24 Score=200.90 Aligned_cols=167 Identities=21% Similarity=0.334 Sum_probs=133.6
Q ss_pred ccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 280 TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 280 ~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
.....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+
T Consensus 25 ~~~~~~ki~vvG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~ 102 (201)
T 2hup_A 25 QYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTIT--QSYYRSA 102 (201)
T ss_dssp -CCEEEEEEEEECTTSSHHHHHHHHHHSCC----------CEEEEEEEETTEEEEEEEECCTTCGGGHHHH--HHHHTTC
T ss_pred ccccceEEEEECcCCCCHHHHHHHHhhCCCCCCCCCCcceEEEEEEEEECCEEEEEEEEECCCcHhHHHHH--HHHHhhC
Confidence 34667999999999999999999999999887777888877777778887444567789999998877766 5688999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cC
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~g 437 (504)
|++|+|||++++.+|+.+..|+..+.... ..++|+++|+||+|+...+.. .++++++++.+++.+++++||++ .|
T Consensus 103 d~iilv~D~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~~SA~~g~g 179 (201)
T 2hup_A 103 NGAILAYDITKRSSFLSVPHWIEDVRKYA---GSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSN 179 (201)
T ss_dssp SEEEEEEETTBHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCSEEEECBTTTTBS
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECCccccccccCHHHHHHHHHHcCCCEEEEEeCCCCCC
Confidence 99999999999999999999999988763 357999999999999865444 44788999999984499999999 99
Q ss_pred HHHHHHHHHHHHhC
Q 010673 438 LNNVFSRIIWAAEH 451 (504)
Q Consensus 438 i~el~~~l~~~~~~ 451 (504)
|+++|++|.+.+..
T Consensus 180 i~~l~~~l~~~i~~ 193 (201)
T 2hup_A 180 VEEAFLRVATELIM 193 (201)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998753
No 9
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=99.92 E-value=3.3e-24 Score=197.29 Aligned_cols=166 Identities=25% Similarity=0.383 Sum_probs=143.6
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.++++.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 13 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 90 (196)
T 3tkl_A 13 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT--SSYYRGAH 90 (196)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCSCCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGCTTH--HHHHTTCS
T ss_pred cccceEEEEECcCCCCHHHHHHHHHcCCCCCCCCCcccceEEEEEEEECCEEEEEEEEECCCcHhhhhhH--HHHHhhCC
Confidence 3567999999999999999999999999988888888888888888888444567789999988777665 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+... ....+++..++++ ++++||++ .|+
T Consensus 91 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gv 166 (196)
T 3tkl_A 91 GIIVVYDVTDQESFNNVKQWLQEIDRYA---SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNV 166 (196)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCC-EEEECTTTCTTH
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECcccccccccCHHHHHHHHHHcCCc-EEEEeCCCCCCH
Confidence 9999999999999999999999987763 3478999999999998766654 4788999999987 99999999 999
Q ss_pred HHHHHHHHHHHhCC
Q 010673 439 NNVFSRIIWAAEHP 452 (504)
Q Consensus 439 ~el~~~l~~~~~~~ 452 (504)
+++|++|.+.+...
T Consensus 167 ~~l~~~l~~~i~~~ 180 (196)
T 3tkl_A 167 EQSFMTMAAEIKKR 180 (196)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988543
No 10
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=99.92 E-value=3.3e-24 Score=195.10 Aligned_cols=164 Identities=19% Similarity=0.332 Sum_probs=138.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++..+ ...+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 15 ~~~~~ki~v~G~~~~GKSsl~~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d 91 (183)
T 3kkq_A 15 NLPTYKLVVVGDGGVGKSALTIQFFQKIFVDDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQEEFSAMR--EQYMRTGD 91 (183)
T ss_dssp CCCEEEEEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCSCGGGCSSH--HHHHHHCS
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHhCCCCCCCCCCcccee-EEEEEeCCcEEEEEEEECCCchhhHHHH--HHHHhcCC
Confidence 45679999999999999999999999988888888888766 5556777444445679999988777665 45789999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEecc-c-cC
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMK-S-KD 437 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak-~-~g 437 (504)
++++|||++++.+|+.+..|+..+..... ..++|+++|+||+|+...+... ++.+++++.++++ ++++||+ + .|
T Consensus 92 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~p~ilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~~~ 168 (183)
T 3kkq_A 92 GFLIVYSVTDKASFEHVDRFHQLILRVKD--RESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIP-YIETSAKDPPLN 168 (183)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHT--SSCCCEEEEEECTTCSTTCCSCHHHHHHHHHHHTCC-EEEEBCSSSCBS
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCcEEEEEECCCchhccCcCHHHHHHHHHHhCCe-EEEeccCCCCCC
Confidence 99999999999999999999998876422 4589999999999998765554 4889999999986 9999999 8 99
Q ss_pred HHHHHHHHHHHHh
Q 010673 438 LNNVFSRIIWAAE 450 (504)
Q Consensus 438 i~el~~~l~~~~~ 450 (504)
++++|+.|.+.+.
T Consensus 169 v~~l~~~l~~~i~ 181 (183)
T 3kkq_A 169 VDKTFHDLVRVIR 181 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 11
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=99.92 E-value=1.7e-24 Score=194.15 Aligned_cols=165 Identities=16% Similarity=0.221 Sum_probs=123.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
+.+||+++|++|||||||+++|++..+...+.++.........+.+++....+.+||++|.+.+..... ..+++.+|++
T Consensus 1 ~~~ki~ivG~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~-~~~~~~~d~~ 79 (169)
T 3q85_A 1 GVFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGDAGGWLQ-DHCLQTGDAF 79 (169)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHCC------------CEEEEEEEETTEEEEEEEECCCCC---------CHHHHHCSEE
T ss_pred CcEEEEEECCCCCCHHHHHHHHHhccCcccccCCCcCCeeeEEEEECCeEEEEEEEECCCccccchhhh-hhhhccCCEE
Confidence 368999999999999999999998877666655555556666777774455667889998877655322 4467889999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
++|||++++.+++.+..|+..+..... ..++|+++|+||+|+.+.+... ++..++++.++++ ++++||++ .|+++
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~~v~~ 156 (169)
T 3q85_A 80 LIVFSVTDRRSFSKVPETLLRLRAGRP--HHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCK-HIETSAALHHNTRE 156 (169)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHST--TSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCE-EEECBTTTTBSHHH
T ss_pred EEEEECCChHHHHHHHHHHHHHHhccc--CCCCCEEEEeeCcchhhcccCCHHHHHHHHHHcCCc-EEEecCccCCCHHH
Confidence 999999999999999999999887632 2489999999999998655544 4888899999986 99999999 99999
Q ss_pred HHHHHHHHHhC
Q 010673 441 VFSRIIWAAEH 451 (504)
Q Consensus 441 l~~~l~~~~~~ 451 (504)
+|+.|.+.+..
T Consensus 157 l~~~l~~~i~~ 167 (169)
T 3q85_A 157 LFEGAVRQIRL 167 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 12
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=99.92 E-value=3e-24 Score=192.66 Aligned_cols=164 Identities=20% Similarity=0.309 Sum_probs=134.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++..+....+.+++....+.+||++|.+.+..+. ..+++.+|+
T Consensus 4 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 81 (170)
T 1z08_A 4 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALG--PIYYRDSNG 81 (170)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHHHHCCCCSSCCCCCSCEEEEEEEESSSCEEEEEEEECCCC---------CCSSTTCSE
T ss_pred CcceEEEEECcCCCCHHHHHHHHHcCCCCcCCCCccceEEEEEEEEECCEEEEEEEEECCCcHhhhhhH--HHHhccCCE
Confidence 456899999999999999999999999887788888888877788888555567789999987776665 457899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+.. .++.+++++.++.+ ++++||++ .|++
T Consensus 82 ~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~ 157 (170)
T 1z08_A 82 AILVYDITDEDSFQKVKNWVKELRKML---GNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAK-HYHTSAKQNKGIE 157 (170)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHH---GGGSEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEEEBTTTTBSHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCeEEEEEECcccccccccCHHHHHHHHHHcCCe-EEEecCCCCCCHH
Confidence 999999999999999999998887642 247999999999999775544 34788899999986 99999999 9999
Q ss_pred HHHHHHHHHHhC
Q 010673 440 NVFSRIIWAAEH 451 (504)
Q Consensus 440 el~~~l~~~~~~ 451 (504)
++|++|.+.+.+
T Consensus 158 ~l~~~l~~~~~~ 169 (170)
T 1z08_A 158 ELFLDLCKRMIE 169 (170)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999987753
No 13
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.92 E-value=3.5e-24 Score=198.74 Aligned_cols=164 Identities=21% Similarity=0.300 Sum_probs=140.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..+. ..+++.+|
T Consensus 23 ~~~~~ki~lvG~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d 100 (201)
T 2ew1_A 23 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSIT--QSYYRSAN 100 (201)
T ss_dssp CSEEEEEEEEESTTSSHHHHHHHHHHSSCCTTCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--GGGSTTCS
T ss_pred cccceEEEEECcCCCCHHHHHHHHHhCCCCCCCCCccceeEEEEEEEECCEEEEEEEEECCCcHHHHHHH--HHHHhcCC
Confidence 3567999999999999999999999999888888888888887788887444567789999998877765 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+|+.+..|+..+.... ..++|+++|+||+|+...+.. .++.+++++..+++ +++|||++ .|+
T Consensus 101 ~~i~v~D~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~g~gv 176 (201)
T 2ew1_A 101 ALILTYDITCEESFRCLPEWLREIEQYA---SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMY-YLETSAKESDNV 176 (201)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECGGGGGGCSSCHHHHHHHHHHHTCC-EEECCTTTCTTH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999999987753 347999999999999765554 34788899999986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 177 ~~l~~~l~~~i~ 188 (201)
T 2ew1_A 177 EKLFLDLACRLI 188 (201)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998774
No 14
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.92 E-value=5.8e-24 Score=192.75 Aligned_cols=168 Identities=19% Similarity=0.337 Sum_probs=134.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCC-CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSE-NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~-~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
....++|+|+|.+|||||||+++|++..+.. .+.+|++..+....+.+++....+.+||++|.+.+..++ ..+++.+
T Consensus 7 ~~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~ 84 (180)
T 2g6b_A 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVT--HAYYRDA 84 (180)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCCCCCCCCCSCEEEEEEEEETTEEEEEEEEECCCC----------CCGGGC
T ss_pred CCcceEEEEECcCCCCHHHHHHHHHhCCCCCCCcCCceeeEEEEEEEEECCEEEEEEEEeCCCcHHHHHHH--HHHccCC
Confidence 4567999999999999999999999998853 556788877777667777444567789999988777665 5688999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cC
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~g 437 (504)
|++++|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+... ++..++++.++++ ++++||++ .|
T Consensus 85 d~ii~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~g 160 (180)
T 2g6b_A 85 HALLLLYDVTNKASFDNIQAWLTEIHEYA---QHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLP-FMETSAKTGLN 160 (180)
T ss_dssp SEEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECCSTTSCCCSCHHHHHHHHHHHTCC-EEECCTTTCTT
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHhC---CCCCcEEEEEECcccCcccccCHHHHHHHHHHcCCe-EEEEeCCCCCC
Confidence 99999999999999999999999888752 2589999999999998765543 4788899999986 99999999 99
Q ss_pred HHHHHHHHHHHHhCCCC
Q 010673 438 LNNVFSRIIWAAEHPHL 454 (504)
Q Consensus 438 i~el~~~l~~~~~~~~~ 454 (504)
+++++++|.+.+...+.
T Consensus 161 i~~l~~~l~~~~~~~~~ 177 (180)
T 2g6b_A 161 VDLAFTAIAKELKRRSM 177 (180)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999998865543
No 15
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=99.92 E-value=5.8e-24 Score=190.61 Aligned_cols=162 Identities=21% Similarity=0.297 Sum_probs=139.1
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
..+||+|+|++|||||||+++|++..+...+.+|.+.++....+.+.+....+.+||++|.+.+..+. ..+++.+|++
T Consensus 5 ~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~~~~ 82 (170)
T 1z0j_A 5 RELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALA--PMYYRGSAAA 82 (170)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHHSCCCTTCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGT--HHHHTTCSEE
T ss_pred cceEEEEECcCCCCHHHHHHHHHcCCCCCCCCCceeEEEEEEEEEECCeEEEEEEEcCCCchhhhccc--HhhCcCCCEE
Confidence 46899999999999999999999999888888888887777777777555667789999987776665 5588999999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
++|||++++.++..+..|+..+.... .++.|+++|+||+|+...++. .+....+++.++.+ ++++||++ .|+++
T Consensus 83 i~v~d~~~~~s~~~~~~~~~~l~~~~---~~~~~iilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~~i~~ 158 (170)
T 1z0j_A 83 IIVYDITKEETFSTLKNWVRELRQHG---PPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAI-FVETSAKNAININE 158 (170)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHS---CTTSEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCE-EEECBTTTTBSHHH
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHhC---CCCCcEEEEEECCccccccccCHHHHHHHHHHcCCE-EEEEeCCCCcCHHH
Confidence 99999999999999999999887752 457999999999999875554 34788899999886 99999999 99999
Q ss_pred HHHHHHHHHh
Q 010673 441 VFSRIIWAAE 450 (504)
Q Consensus 441 l~~~l~~~~~ 450 (504)
+++.|.+.+.
T Consensus 159 l~~~i~~~i~ 168 (170)
T 1z0j_A 159 LFIEISRRIP 168 (170)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHHh
Confidence 9999998763
No 16
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=99.92 E-value=6e-24 Score=192.81 Aligned_cols=165 Identities=21% Similarity=0.279 Sum_probs=140.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+.+....+.+||++|++.+...+ ..+++.+|
T Consensus 9 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 86 (181)
T 2efe_B 9 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLA--PMYYRGAA 86 (181)
T ss_dssp -CEEEEEEEECCTTSCHHHHHHHHHHCCCTTTSCCCSCCSEEEEEEEETTEEEEEEEEECCCSGGGGGGT--HHHHTTCS
T ss_pred CccceEEEEECcCCCCHHHHHHHHHcCCCCCcCCCCceeEEEEEEEEECCEEEEEEEEeCCCChhhhhhh--HHHhccCC
Confidence 3557899999999999999999999999888777888877877778777555677889999988777665 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... .+++|+++|+||+|+...+.. .++..++++.++++ ++++||++ .|+
T Consensus 87 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gi 162 (181)
T 2efe_B 87 AAIIVFDVTNQASFERAKKWVQELQAQG---NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNV 162 (181)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHHS---CTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCE-EEECCSSSCTTH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECCcccccccCCHHHHHHHHHHcCCE-EEEEECCCCCCH
Confidence 9999999999999999999999988763 358999999999999776554 44788899999986 99999999 999
Q ss_pred HHHHHHHHHHHhC
Q 010673 439 NNVFSRIIWAAEH 451 (504)
Q Consensus 439 ~el~~~l~~~~~~ 451 (504)
++++++|.+.+..
T Consensus 163 ~~l~~~l~~~~~~ 175 (181)
T 2efe_B 163 KEIFYEIARRLPR 175 (181)
T ss_dssp HHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987643
No 17
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=99.92 E-value=3.3e-24 Score=192.03 Aligned_cols=162 Identities=22% Similarity=0.282 Sum_probs=138.3
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|+++.+...+.+|.+.++....+.+++....+.+||++|.+.+...+ ..+++.+|+
T Consensus 4 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~G~~~~~~~~--~~~~~~~d~ 81 (170)
T 1r2q_A 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLA--PMYYRGAQA 81 (170)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGH--HHHHTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceEEEEEEEEECCEEEEEEEEeCCCcHHhhhhh--HHhccCCCE
Confidence 456899999999999999999999999888787888887777777777545677789999988777665 557899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.+++.+..|+..+.... .+++|+++|+||+|+...+.. .++..+++..++++ ++++||++ .|++
T Consensus 82 ~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gi~ 157 (170)
T 1r2q_A 82 AIVVYDITNEESFARAKNWVKELQRQA---SPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLL-FMETSAKTSMNVN 157 (170)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHS---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEECCTTTCTTHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECccCccccccCHHHHHHHHHHcCCe-EEEEeCCCCCCHH
Confidence 999999999999999999999887653 358999999999999765444 34788899998886 99999999 9999
Q ss_pred HHHHHHHHHH
Q 010673 440 NVFSRIIWAA 449 (504)
Q Consensus 440 el~~~l~~~~ 449 (504)
+++++|.+.+
T Consensus 158 ~l~~~i~~~~ 167 (170)
T 1r2q_A 158 EIFMAIAKKL 167 (170)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHHH
Confidence 9999998865
No 18
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=99.92 E-value=5.1e-24 Score=192.64 Aligned_cols=164 Identities=19% Similarity=0.342 Sum_probs=140.1
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+...+ ..+++.+|
T Consensus 12 ~~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 89 (179)
T 1z0f_A 12 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVT--RSYYRGAA 89 (179)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCSSCTTSCCCCEEEEEEEETTEEEEEEEEECTTGGGTCHHH--HHHHHTCS
T ss_pred cccceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceEEEEEEEEECCeEEEEEEEECCCChHhhhhH--HHHhccCC
Confidence 4567999999999999999999999999888788888887777777777444567789999987776665 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++++|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+.. .++.+++++.++++ ++++||++ .|+
T Consensus 90 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 165 (179)
T 1z0f_A 90 GALMVYDITRRSTYNHLSSWLTDARNLT---NPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLL-FLEASAKTGENV 165 (179)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCE-EEECCTTTCTTH
T ss_pred EEEEEEeCcCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECcccccccccCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999999887753 358999999999999765544 34788899999986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 166 ~~l~~~l~~~i~ 177 (179)
T 1z0f_A 166 EDAFLEAAKKIY 177 (179)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 19
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=99.92 E-value=1.3e-24 Score=197.76 Aligned_cols=163 Identities=19% Similarity=0.342 Sum_probs=113.1
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (183)
T 2fu5_C 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTIT--TAYYRGAMG 83 (183)
T ss_dssp SEEEEEEEECCCCC----------------CHHHHHCEEEEEEEEEETTEEEEEEEEEC---------C--CTTTTTCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCCCCCCcccceeEEEEEEECCEEEEEEEEcCCCChhhhhhH--HHHHhcCCE
Confidence 457999999999999999999999988877777788877777777777444567789999987777665 558899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+.. .++..++++.++++ ++++||++ .|++
T Consensus 84 ~i~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~~i~ 159 (183)
T 2fu5_C 84 IMLVYDITNEKSFDNIRNWIRNIEEHA---SADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIK-FMETSAKANINVE 159 (183)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHS---CTTCEEEEEEEC--CCSCCCSCHHHHHHHHHHHTCE-EEECCC---CCHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECccCCccCcCCHHHHHHHHHHcCCe-EEEEeCCCCCCHH
Confidence 999999999999999999999987652 347999999999999876554 44788999999986 99999999 9999
Q ss_pred HHHHHHHHHHh
Q 010673 440 NVFSRIIWAAE 450 (504)
Q Consensus 440 el~~~l~~~~~ 450 (504)
++|+.|.+.+.
T Consensus 160 ~l~~~l~~~i~ 170 (183)
T 2fu5_C 160 NAFFTLARDIK 170 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998774
No 20
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=99.92 E-value=2.6e-24 Score=192.53 Aligned_cols=162 Identities=15% Similarity=0.262 Sum_probs=138.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
+..+||+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..+. ..+++.+|+
T Consensus 3 ~~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 80 (168)
T 1z2a_A 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT--KAYYRGAQA 80 (168)
T ss_dssp -CEEEEEEECSTTSSHHHHHHHHHHCCCCCCSSCCCSSSEEEEEEEETTEEEEEEEECCTTGGGTTCCC--HHHHTTCCE
T ss_pred ceeEEEEEECcCCCCHHHHHHHHHcCCCCCCCCCceEEEEEEEEEEECCEEEEEEEEcCCCcHhHHHHH--HHHhcCCCE
Confidence 457899999999999999999999999888888888877877778877445567789999987766655 568899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.+++.+..|+..+... ..+.|+++|+||+|+...+.. .++.+++++.++++ ++++||++ .|++
T Consensus 81 ~i~v~d~~~~~s~~~~~~~~~~i~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~~i~ 155 (168)
T 1z2a_A 81 CVLVFSTTDRESFEAISSWREKVVAE----VGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLR-FYRTSVKEDLNVS 155 (168)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHH----HCSCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCE-EEECBTTTTBSSH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHh----CCCCCEEEEEECcccCcccccCHHHHHHHHHHcCCe-EEEEecCCCCCHH
Confidence 99999999999999999999988776 348999999999999765544 44788899999986 99999999 9999
Q ss_pred HHHHHHHHHHh
Q 010673 440 NVFSRIIWAAE 450 (504)
Q Consensus 440 el~~~l~~~~~ 450 (504)
+++++|.+.+.
T Consensus 156 ~l~~~l~~~~~ 166 (168)
T 1z2a_A 156 EVFKYLAEKHL 166 (168)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998775
No 21
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=99.92 E-value=1.9e-24 Score=200.19 Aligned_cols=170 Identities=17% Similarity=0.275 Sum_probs=136.1
Q ss_pred hcccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcc
Q 010673 278 QQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALA 357 (504)
Q Consensus 278 ~~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~ 357 (504)
+......+||+|+|.+|||||||+++|++..+...+.+|++..+ ...+.+.+....+.+||++|.+.+..++ ..+++
T Consensus 18 ~~~~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~ 94 (201)
T 3oes_A 18 GMPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTY-SKIVTLGKDEFHLHLVDTAGQDEYSILP--YSFII 94 (201)
T ss_dssp -----CEEEEEEEESTTSSHHHHHHHHHHSCCCSCCCCCSEEEE-EEEEC----CEEEEEEEECCCCTTCCCC--GGGTT
T ss_pred CCCCCCcEEEEEECCCCcCHHHHHHHHHhCCCCCCCCCccceEE-EEEEEECCEEEEEEEEECCCccchHHHH--HHHHh
Confidence 33456789999999999999999999999999888888888766 4456666455677889999987776665 56889
Q ss_pred cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-
Q 010673 358 SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 358 ~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~- 435 (504)
.+|++++|||++++.+++.+..|+..+..... ..++|+++|+||+|+...+... .+...+++.++.+ ++++||++
T Consensus 95 ~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~ 171 (201)
T 3oes_A 95 GVHGYVLVYSVTSLHSFQVIESLYQKLHEGHG--KTRVPVVLVGNKADLSPEREVQAVEGKKLAESWGAT-FMESSAREN 171 (201)
T ss_dssp TCCEEEEEEETTCHHHHHHHHHHHHHHHC-------CCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEECCTTCH
T ss_pred cCCEEEEEEeCCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECccCccccccCHHHHHHHHHHhCCe-EEEEeCCCC
Confidence 99999999999999999999999999876422 3478999999999998766554 4788999999996 99999999
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 010673 436 KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 436 ~gi~el~~~l~~~~~~~~ 453 (504)
.|++++|+.|.+.+....
T Consensus 172 ~~v~~l~~~l~~~i~~~~ 189 (201)
T 3oes_A 172 QLTQGIFTKVIQEIARVE 189 (201)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHhhh
Confidence 999999999999886543
No 22
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=99.92 E-value=9.8e-24 Score=194.06 Aligned_cols=164 Identities=25% Similarity=0.383 Sum_probs=138.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 16 ~~~~ki~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~D~~G~~~~~~~~--~~~~~~~d~ 92 (194)
T 2atx_A 16 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDTAGQEDYDRLR--PLSYPMTDV 92 (194)
T ss_dssp EEEEEEEEEECTTSSHHHHHHHHHHSSCCCSCCCSSCCCEE-EEEESSSCEEEEEEECCCCSSSSTTTG--GGGCTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCcccceeE-EEEEECCEEEEEEEEECCCCcchhHHH--HHhcCCCCE
Confidence 45689999999999999999999999888888888887663 457777445667789999987777665 458899999
Q ss_pred EEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCc------------cc-hHHHHHHHHHhCCCC
Q 010673 362 TIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYT------------MA-VQDSARVTQELGIEP 427 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~------------~~-~~~~~~~~~~~~~~~ 427 (504)
+++|||++++.+|..+. .|+..+... .+++|+++|+||+|+.... .. .++..++++.++..+
T Consensus 93 ~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 168 (194)
T 2atx_A 93 FLICFSVVNPASFQNVKEEWVPELKEY----APNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACC 168 (194)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----STTCCEEEEEECTTSTTCHHHHHHHTTTTCCCCCHHHHHHHHHHHTCSC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEEChhhcccccchhhcccccCcccCHHHHHHHHHHcCCcE
Confidence 99999999999999987 798888876 4589999999999997642 22 347889999999855
Q ss_pred eEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 428 PIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 428 ~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++++||++ .|++++|++|.+.+..|
T Consensus 169 ~~~~Sa~~g~gi~~l~~~l~~~i~~p 194 (194)
T 2atx_A 169 YVECSALTQKGLKTVFDEAIIAILTP 194 (194)
T ss_dssp EEECCTTTCTTHHHHHHHHHHHHHCC
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHhcC
Confidence 99999999 99999999999987654
No 23
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=99.92 E-value=1.2e-23 Score=194.93 Aligned_cols=163 Identities=18% Similarity=0.311 Sum_probs=140.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+.+....+.+||++|.+.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (203)
T 1zbd_A 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLERYRTIT--TAYYRGAMG 83 (203)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHHTCCCCSCCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--HTTGGGCSE
T ss_pred ceeeEEEEECCCCCCHHHHHHHHhcCCCCCCcCCccceeEEEEEEEECCeEEEEEEEECCCchhhcchH--HHhhcCCCE
Confidence 457999999999999999999999999888888888877777777777445677789999998877765 568899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+|+|||++++.+++.+..|+..+.... ..+.|+++|+||+|+...+... +...++++.++++ ++++||++ .|++
T Consensus 84 ii~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~ 159 (203)
T 1zbd_A 84 FILMYDITNEESFNAVQDWSTQIKTYS---WDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFE-FFEASAKDNINVK 159 (203)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHS---CSSCEEEEEEECTTCTTSCCSCHHHHHHHHHHHTCE-EEECBTTTTBSSH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECcccCcccccCHHHHHHHHHHCCCe-EEEEECCCCCCHH
Confidence 999999999999999999999987752 3579999999999998765543 4788899999986 99999999 9999
Q ss_pred HHHHHHHHHHh
Q 010673 440 NVFSRIIWAAE 450 (504)
Q Consensus 440 el~~~l~~~~~ 450 (504)
++|++|.+.+.
T Consensus 160 ~l~~~l~~~i~ 170 (203)
T 1zbd_A 160 QTFERLVDVIC 170 (203)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 24
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.92 E-value=7.6e-24 Score=197.60 Aligned_cols=168 Identities=24% Similarity=0.388 Sum_probs=137.5
Q ss_pred hhcccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhc
Q 010673 277 KQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEAL 356 (504)
Q Consensus 277 ~~~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~ 356 (504)
.+......++|+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..++
T Consensus 13 ~~~~~~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~ 90 (213)
T 3cph_A 13 NGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTIT--TAYY 90 (213)
T ss_dssp -------CEEEEEECSTTSSHHHHHHHHHHCCCCCSSSCCCSCCEEEEEEEETTEEEEEEEECCTTGGGGTCCC--HHHH
T ss_pred CCCCCCcceEEEEECCCCCCHHHHHHHHHhCCCCcccCCcccceEEEEEEEECCEEEEEEEEeCCCcHHHHHHH--HHHh
Confidence 33445678999999999999999999999999887788888877887778887444567789999987776655 5688
Q ss_pred ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-
Q 010673 357 ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 357 ~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~- 435 (504)
..+|++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+.......+...++++.++++ ++++||++
T Consensus 91 ~~~d~ii~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~ 166 (213)
T 3cph_A 91 RGAMGIILVYDVTDERTFTNIKQWFKTVNEHA---NDEAQLLLVGNKSDMETRVVTADQGEALAKELGIP-FIESSAKND 166 (213)
T ss_dssp TTCSEEEEEEETTCHHHHHTHHHHHHHHHHHT---TTCSEEEEEEECTTCSSCCSCHHHHHHHHHHHTCC-EEECBTTTT
T ss_pred ccCCEEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECCCCcccccCHHHHHHHHHHcCCE-EEEEeCCCC
Confidence 99999999999999999999999999887652 24799999999999955444455788899999986 99999999
Q ss_pred cCHHHHHHHHHHHHh
Q 010673 436 KDLNNVFSRIIWAAE 450 (504)
Q Consensus 436 ~gi~el~~~l~~~~~ 450 (504)
.|++++|++|.+.+.
T Consensus 167 ~gi~~l~~~l~~~~~ 181 (213)
T 3cph_A 167 DNVNEIFFTLAKLIQ 181 (213)
T ss_dssp BSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998764
No 25
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=99.92 E-value=4.8e-24 Score=195.79 Aligned_cols=164 Identities=19% Similarity=0.300 Sum_probs=136.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 18 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 95 (191)
T 2a5j_A 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSIT--RSYYRGAA 95 (191)
T ss_dssp TCEEEEEEEESSTTSSHHHHHHHHHHSCCCC-----CCSSEEEEEEEETTEEEEEEEECCTTGGGTSCCC--HHHHTTCS
T ss_pred cCcceEEEEECcCCCCHHHHHHHHhcCCCCCCCCCcccceeEEEEEEECCEEEEEEEEECCCchhhhhhH--HHHhccCC
Confidence 4567999999999999999999999999888887888877877778887444567789999987776655 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+.. .++.+++++.++++ ++++||++ .|+
T Consensus 96 ~ii~v~d~~~~~s~~~~~~~l~~i~~~~---~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 171 (191)
T 2a5j_A 96 GALLVYDITRRETFNHLTSWLEDARQHS---SSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLI-FMETSAKTACNV 171 (191)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEEECTTTCTTH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECcccCCccccCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999999987652 348999999999999765544 34788899999986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 172 ~~l~~~l~~~i~ 183 (191)
T 2a5j_A 172 EEAFINTAKEIY 183 (191)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998774
No 26
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.92 E-value=5.4e-24 Score=190.64 Aligned_cols=160 Identities=20% Similarity=0.291 Sum_probs=136.4
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEE
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTI 363 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ii 363 (504)
.+||+|+|++|||||||+++|++..+...+.+|.+.++....+.+++....+.+||++|.+.+...+ ..+++.+|+++
T Consensus 3 ~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~G~~~~~~~~--~~~~~~~d~~i 80 (170)
T 1ek0_A 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLA--PXYYRNAQAAL 80 (170)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGH--HHHHTTCSEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEECCCChhhhhhh--hhhhccCcEEE
Confidence 5899999999999999999999999888788888887777777777444567789999988777665 56889999999
Q ss_pred EEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC---ccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 364 FVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY---TMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 364 lV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~---~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
+|||++++.++..+..|+..+.... ..+.|+++|+||+|+... +.. .+...++++.++++ ++++||++ .|+
T Consensus 81 ~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~piilv~nK~Dl~~~~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 156 (170)
T 1ek0_A 81 VVYDVTKPQSFIKARHWVKELHEQA---SKDIIIALVGNKIDXLQEGGERKVAREEGEKLAEEKGLL-FFETSAKTGENV 156 (170)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHHS---CTTCEEEEEEECGGGGGSSCCCCSCHHHHHHHHHHHTCE-EEECCTTTCTTH
T ss_pred EEEecCChHHHHHHHHHHHHHHHhc---CCCCcEEEEEECCCccccccccCCCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999887653 358999999999999764 333 34778899999986 99999999 999
Q ss_pred HHHHHHHHHHH
Q 010673 439 NNVFSRIIWAA 449 (504)
Q Consensus 439 ~el~~~l~~~~ 449 (504)
+++|++|.+.+
T Consensus 157 ~~l~~~l~~~i 167 (170)
T 1ek0_A 157 NDVFLGIGEKI 167 (170)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 27
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=99.91 E-value=5.2e-24 Score=195.82 Aligned_cols=165 Identities=19% Similarity=0.300 Sum_probs=140.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+.+....+.+||++|.+.+..+. ..+++.+|
T Consensus 20 ~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 97 (192)
T 2fg5_A 20 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA--PMYYRGSA 97 (192)
T ss_dssp -CEEEEEEEEECTTSSHHHHHHHHHHCCCCTTCCCCSSEEEEEEEEECSSSEEEEEEEEECCSGGGGGGT--HHHHTTCS
T ss_pred cCCceEEEEECcCCCCHHHHHHHHhcCCCCCCcCCCcceeEEEEEEEeCCEEEEEEEEcCCCchhhHhhh--HHhhccCC
Confidence 3567999999999999999999999999887788888888877778887566677889999988777665 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.++..+..|+..+.... ..++|+++|+||+|+...+.. .++..++++.++++ ++++||++ .|+
T Consensus 98 ~iilV~d~~~~~s~~~~~~~~~~i~~~~---~~~~piiiv~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 173 (192)
T 2fg5_A 98 AAVIVYDITKQDSFYTLKKWVKELKEHG---PENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAI-VVETSAKNAINI 173 (192)
T ss_dssp EEEEEEETTCTHHHHHHHHHHHHHHHHS---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHTTTCE-EEECBTTTTBSH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHhC---CCCCcEEEEEECcccccccccCHHHHHHHHHHcCCE-EEEEeCCCCcCH
Confidence 9999999999999999999999987753 347999999999999764444 44788899999886 99999999 999
Q ss_pred HHHHHHHHHHHhC
Q 010673 439 NNVFSRIIWAAEH 451 (504)
Q Consensus 439 ~el~~~l~~~~~~ 451 (504)
+++++.|.+.+..
T Consensus 174 ~~l~~~l~~~i~~ 186 (192)
T 2fg5_A 174 EELFQGISRQIPP 186 (192)
T ss_dssp HHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987643
No 28
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=99.91 E-value=6e-24 Score=194.77 Aligned_cols=164 Identities=20% Similarity=0.338 Sum_probs=140.1
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+...+....+.+||++|.+.+..++ ..+++.+|
T Consensus 19 ~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 96 (189)
T 2gf9_A 19 SDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTIT--TAYYRGAM 96 (189)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCCCCCCEEEEEEEEETTEEEEEEEEECCSCCSSCCSG--GGGGTTCS
T ss_pred cCceeEEEEECCCCCCHHHHHHHHHcCCCCCCcCCceeEEEEEEEEEECCeEEEEEEEeCCCcHHHhhhH--HHhccCCC
Confidence 4567999999999999999999999999888777888877777777777445677789999987776665 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+... +..+++++.++++ ++++||++ .|+
T Consensus 97 ~ii~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gi 172 (189)
T 2gf9_A 97 GFLLMYDIANQESFAAVQDWATQIKTYS---WDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFE-FFEASAKENINV 172 (189)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEECBTTTTBSH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECcccccccCCCHHHHHHHHHHcCCe-EEEEECCCCCCH
Confidence 9999999999999999999999987752 3579999999999997755543 4788999999986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
++++++|.+.+.
T Consensus 173 ~~l~~~l~~~i~ 184 (189)
T 2gf9_A 173 KQVFERLVDVIC 184 (189)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 29
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=99.91 E-value=7.3e-24 Score=189.36 Aligned_cols=162 Identities=20% Similarity=0.308 Sum_probs=134.7
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEE
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTI 363 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ii 363 (504)
.+||+++|.+|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..+++.+|+++
T Consensus 3 ~~ki~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~d~~i 79 (167)
T 1c1y_A 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMR--DLYMKNGQGFA 79 (167)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHCCCCCSCCCCSEEEEE-EEEESSSCEEEEEEEEECSSCSSTTHH--HHHHHHCSEEE
T ss_pred eeEEEEECCCCCCHHHHHHHHHcCCCCCCCCCCccceEE-EEEEECCEEEEEEEEECCChHHHHHHH--HHHhccCCEEE
Confidence 589999999999999999999999888888888887654 456777555667789999987776665 45788999999
Q ss_pred EEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHHHH
Q 010673 364 FVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLNNV 441 (504)
Q Consensus 364 lV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~el 441 (504)
+|||++++.+++.+..|+..+..... ..++|+++|+||+|+...+.. .++..++++.++..+++++||++ .|++++
T Consensus 80 ~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l 157 (167)
T 1c1y_A 80 LVYSITAQSTFNDLQDLREQILRVKD--TEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEI 157 (167)
T ss_dssp EEEETTCHHHHHTHHHHHHHHHHHHC--CSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTSCEEEECBTTTTBSHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhhC--cCCCcEEEEEECccccccccCCHHHHHHHHHHccCCcEEEecCCCCCCHHHH
Confidence 99999999999999999988876532 358999999999999876554 34788888888333499999999 999999
Q ss_pred HHHHHHHHh
Q 010673 442 FSRIIWAAE 450 (504)
Q Consensus 442 ~~~l~~~~~ 450 (504)
+++|.+.+.
T Consensus 158 ~~~l~~~i~ 166 (167)
T 1c1y_A 158 FYDLVRQIN 166 (167)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998763
No 30
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=99.91 E-value=1.6e-23 Score=189.31 Aligned_cols=168 Identities=15% Similarity=0.282 Sum_probs=135.7
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...++|+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 5 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~~ 82 (177)
T 1wms_A 5 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLR--TPFYRGSDC 82 (177)
T ss_dssp EEEEEEEEECCTTSSHHHHHHHHHHSCCCC----CCSEEEEEEEEEETTEEEEEEEEECCCCGGGHHHH--GGGGTTCSE
T ss_pred cceeEEEEECCCCCCHHHHHHHHHcCCCCCCCCCceeeeEEEEEEEECCEEEEEEEEeCCCchhhhhhH--HHHHhcCCE
Confidence 457899999999999999999999999887778888887777778887444567789999988877766 468899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhcc-CCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGE-DSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~-~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.++..+..|+..+..... ....++|+++|+||+|+.......++..++++.....+++++||++ .|++
T Consensus 83 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~ 162 (177)
T 1wms_A 83 CLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVA 162 (177)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHHTCSCTTTSCEEEEEECTTCSSCSSCHHHHHHHHHHTTCCCEEECCTTTCTTHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHccccccCCCcEEEEEECCcccccccCHHHHHHHHHhcCCceEEEEeCCCCCCHH
Confidence 9999999999999999999988876521 1125789999999999985444455788888844434599999999 9999
Q ss_pred HHHHHHHHHHhC
Q 010673 440 NVFSRIIWAAEH 451 (504)
Q Consensus 440 el~~~l~~~~~~ 451 (504)
++|++|.+.+..
T Consensus 163 ~l~~~l~~~~~~ 174 (177)
T 1wms_A 163 AAFEEAVRRVLA 174 (177)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 31
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=99.91 E-value=1.2e-23 Score=195.60 Aligned_cols=164 Identities=23% Similarity=0.340 Sum_probs=141.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (206)
T 2bcg_Y 6 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTIT--SSYYRGSHG 83 (206)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHHHHCCCCTTCCCSSCCCEEEEEEEETTEEEEEEEECCTTTTTTTCCC--GGGGTTCSE
T ss_pred CcceEEEEECCCCCCHHHHHHHHhcCCCCCCCCCcccceeEEEEEEECCEEEEEEEEeCCChHHHHHHH--HHhccCCCE
Confidence 457999999999999999999999999988888888888887788887444567789999987776665 568899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+|+|||++++.++..+..|+..+.... ..++|+++|+||+|+...+... +...+++..++++ ++++||++ .|++
T Consensus 84 vilv~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gi~ 159 (206)
T 2bcg_Y 84 IIIVYDVTDQESFNGVKMWLQEIDRYA---TSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMP-FLETSALDSTNVE 159 (206)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHS---CTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCC-EEECCTTTCTTHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCe-EEEEeCCCCCCHH
Confidence 999999999999999999999987653 3479999999999998765543 4788899999986 99999999 9999
Q ss_pred HHHHHHHHHHhC
Q 010673 440 NVFSRIIWAAEH 451 (504)
Q Consensus 440 el~~~l~~~~~~ 451 (504)
++|++|.+.+..
T Consensus 160 ~l~~~l~~~i~~ 171 (206)
T 2bcg_Y 160 DAFLTMARQIKE 171 (206)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988743
No 32
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=99.91 E-value=7.3e-24 Score=193.27 Aligned_cols=165 Identities=19% Similarity=0.327 Sum_probs=140.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+...+ ..+++.+|
T Consensus 7 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 84 (186)
T 2bme_A 7 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVT--RSYYRGAA 84 (186)
T ss_dssp CSEEEEEEEEESTTSSHHHHHHHHHHSSCCTTCCCCSEEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--HTTSTTCS
T ss_pred cccceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceEEEEEEEEECCEEEEEEEEeCCCcHHHHHHH--HHHHhcCC
Confidence 3567999999999999999999999999988888888877777778887444567789999998877765 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.++..+..|+..+.... ..++|+++|+||+|+...+... .+..++++.++++ ++++||++ .|+
T Consensus 85 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 160 (186)
T 2bme_A 85 GALLVYDITSRETYNALTNWLTDARMLA---SQNIVIILCGNKKDLDADREVTFLEASRFAQENELM-FLETSALTGENV 160 (186)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEECCTTTCTTH
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECcccccccccCHHHHHHHHHHcCCE-EEEecCCCCCCH
Confidence 9999999999999999999998887653 3589999999999997654443 4788899999986 99999999 999
Q ss_pred HHHHHHHHHHHhC
Q 010673 439 NNVFSRIIWAAEH 451 (504)
Q Consensus 439 ~el~~~l~~~~~~ 451 (504)
+++|++|.+.+..
T Consensus 161 ~~l~~~l~~~~~~ 173 (186)
T 2bme_A 161 EEAFVQCARKILN 173 (186)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988753
No 33
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=99.91 E-value=1e-23 Score=190.01 Aligned_cols=162 Identities=17% Similarity=0.287 Sum_probs=122.7
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhH--hhhhhhhhhccccc
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV--KKILSNKEALASCD 360 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~--~~~~~~~~~~~~ad 360 (504)
..+||+|+|++|||||||+++|++..+...+ ++++.++....+.+++....+.+||++|.+.. ..+. ..+++.+|
T Consensus 3 ~~~ki~i~G~~~vGKSsl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~g~~~~~~~~~~--~~~~~~~~ 79 (175)
T 2nzj_A 3 ALYRVVLLGDPGVGKTSLASLFAGKQERDLH-EQLGEDVYERTLTVDGEDTTLVVVDTWEAEKLDKSWSQ--ESCLQGGS 79 (175)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHCC-----C-CCSSSSEEEEEEEETTEEEEEEEECCC-------CHHH--HHTTTSCS
T ss_pred eEEEEEEECCCCccHHHHHHHHhcCCCcccc-CccccceeEEEEEECCEEEEEEEEecCCCCccchhhhH--HhhcccCC
Confidence 4689999999999999999999999876654 34555566666777744456678999888663 3333 45778999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++++|||++++.+|+.+..|+..+..... ..++|+++|+||+|+...+... ++.+.++..++++ ++++||++ .|+
T Consensus 80 ~~i~v~d~~~~~s~~~~~~~~~~l~~~~~--~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~g~gi 156 (175)
T 2nzj_A 80 AYVIVYSIADRGSFESASELRIQLRRTHQ--ADHVPIILVGNKADLARCREVSVEEGRACAVVFDCK-FIETSATLQHNV 156 (175)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHCC------CCEEEEEECTTCTTTCCSCHHHHHHHHHHHTSE-EEECBTTTTBSH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhhc--cCCCCEEEEEEChhhccccccCHHHHHHHHHHcCCe-EEEEecCCCCCH
Confidence 99999999999999999999988876421 3479999999999998765553 4777888899986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 157 ~~l~~~l~~~~~ 168 (175)
T 2nzj_A 157 AELFEGVVRQLR 168 (175)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998774
No 34
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.91 E-value=2e-24 Score=198.43 Aligned_cols=165 Identities=18% Similarity=0.302 Sum_probs=142.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+.+....+.+||++|.+.+..+. ..+++.+|
T Consensus 20 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 97 (191)
T 3dz8_A 20 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTIT--TAYYRGAM 97 (191)
T ss_dssp EEECEEEEEEESTTSSHHHHHHHHHHHTTCCCEEEEETTTEEEEEEEETTTTEEEEEECHHHHHHCHHHH--HHHHTTCC
T ss_pred cCeeeEEEEECCCCcCHHHHHHHHhcCCCCcccCCCeeeEEEEEEEEECCEEEEEEEEeCCChHHHHHHH--HHHHccCC
Confidence 4567999999999999999999999999888777787777777778777666778899999987777765 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+... +..+.+++.++++ ++++||++ .|+
T Consensus 98 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 173 (191)
T 3dz8_A 98 GFILMYDITNEESFNAVQDWATQIKTYS---WDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFD-FFEASAKENISV 173 (191)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEECBTTTTBSH
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCe-EEEEECCCCCCH
Confidence 9999999999999999999999998752 3589999999999997665554 4788999999996 99999999 999
Q ss_pred HHHHHHHHHHHhC
Q 010673 439 NNVFSRIIWAAEH 451 (504)
Q Consensus 439 ~el~~~l~~~~~~ 451 (504)
+++|+.|.+.+..
T Consensus 174 ~~l~~~l~~~i~~ 186 (191)
T 3dz8_A 174 RQAFERLVDAICD 186 (191)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998743
No 35
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=99.91 E-value=8.8e-24 Score=192.84 Aligned_cols=164 Identities=20% Similarity=0.283 Sum_probs=135.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|++|||||||+++|++..+...+.+|.+..+. ..+.+++....+.+||++|++.+..+. ..+++.+|
T Consensus 4 ~~~~~ki~v~G~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~ 80 (184)
T 1m7b_A 4 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPYYDNVR--PLSYPDSD 80 (184)
T ss_dssp --CEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEECSSCEEEEEEEEECCSGGGTTTG--GGGCTTCS
T ss_pred CceEEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceeEE-EEEEECCEEEEEEEEECCCChhhhhhH--HhhcCCCc
Confidence 355789999999999999999999999988878888887664 356777555677889999998777665 45889999
Q ss_pred EEEEEEeCCCcccHHHH-HHHHHHHHHhccCCCCCCcEEEEEECCCCCCC------------ccc-hHHHHHHHHHhCCC
Q 010673 361 VTIFVYDSSDEYSWKRT-KELLVEVARLGEDSGYGVPCLLIASKDDLKPY------------TMA-VQDSARVTQELGIE 426 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~-~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~------------~~~-~~~~~~~~~~~~~~ 426 (504)
++++|||++++.+|+.+ ..|+..+... .++.|+++|+||+|+... +.+ .++..++++.++..
T Consensus 81 ~~i~v~d~~~~~s~~~~~~~~~~~i~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (184)
T 1m7b_A 81 AVLICFDISRPETLDSVLKKWKGEIQEF----CPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAA 156 (184)
T ss_dssp EEEEEEETTCHHHHHHHHHTHHHHHHHH----CTTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCS
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHH----CCCCCEEEEEEcchhhcchhhHhhhhhcccCCCCHHHHHHHHHHcCCc
Confidence 99999999999999998 7898888776 458999999999999742 222 34788899998854
Q ss_pred CeEEEecc-c-cCHHHHHHHHHHHHhC
Q 010673 427 PPIPVSMK-S-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 427 ~~~~vSak-~-~gi~el~~~l~~~~~~ 451 (504)
++++|||+ + .|++++|+.|.+.+..
T Consensus 157 ~~~e~Sa~~~~~gi~~l~~~i~~~~l~ 183 (184)
T 1m7b_A 157 TYIECSALQSENSVRDIFHVATLACVN 183 (184)
T ss_dssp EEEECBTTTBHHHHHHHHHHHHHHHHT
T ss_pred EEEEeeecCCCcCHHHHHHHHHHHHhc
Confidence 59999999 6 8999999999988753
No 36
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=99.91 E-value=2.9e-24 Score=196.76 Aligned_cols=165 Identities=19% Similarity=0.292 Sum_probs=133.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+.+..+ ..+++.+|
T Consensus 18 ~~~~~ki~vvG~~~vGKTsLi~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~---~~~~~~~~ 93 (187)
T 3c5c_A 18 GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYS-SEETVDHQPVHLRVMDTADLDTPRNC---ERYLNWAH 93 (187)
T ss_dssp --CEEEEEEECCTTSSHHHHHHHHHHSSCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCC---CCCT---HHHHTTCS
T ss_pred CCceEEEEEECCCCCcHHHHHHHHHhCCCCcccCCCccceee-EEEEECCEEEEEEEEECCCCCcchhH---HHHHhhCC
Confidence 356799999999999999999999999988888889887664 34666644456678999998766554 35889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEec-cc-cC
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSM-KS-KD 437 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSa-k~-~g 437 (504)
++++|||++++.+|+.+..|+..+.........++|+++|+||+|+...+... ++..++++.++++ +++||| ++ .|
T Consensus 94 ~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~e~Sa~~~g~g 172 (187)
T 3c5c_A 94 AFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCL-FFEVSACLDFEH 172 (187)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCE-EEECCSSSCSHH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHhhccCCCCCEEEEEECcchhhcCccCHHHHHHHHHHcCCc-EEEEeecCcccc
Confidence 99999999999999999999998876521112489999999999997655543 4788999999986 999999 88 99
Q ss_pred HHHHHHHHHHHHh
Q 010673 438 LNNVFSRIIWAAE 450 (504)
Q Consensus 438 i~el~~~l~~~~~ 450 (504)
|+++|+.|++.+.
T Consensus 173 v~~lf~~l~~~i~ 185 (187)
T 3c5c_A 173 VQHVFHEAVREAR 185 (187)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998774
No 37
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=99.91 E-value=2.1e-24 Score=195.34 Aligned_cols=168 Identities=20% Similarity=0.292 Sum_probs=137.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCC-cEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGG-NKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~-~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
...+||+|+|++|||||||+++|++..+...+.+|++.++....+.++++ ...+.+||++|++.+..++ ..+++.+|
T Consensus 4 ~~~~ki~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d 81 (178)
T 2hxs_A 4 MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKML--DKYIYGAQ 81 (178)
T ss_dssp CCEEEEEEECCTTSSHHHHHHHHHGGGTTHHHHHTTTSSEEEEEEEETTTEEEEEEEEECTTCCTTCTTH--HHHHTTCS
T ss_pred CceEEEEEECcCCCCHHHHHHHHHhCcCCCCCCCceeEEEEEEEEEeCCCCEEEEEEEECCCCccccchh--hHHHhhCC
Confidence 45699999999999999999999999887666778877777777888743 3567789999987776665 55889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCc-EEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cC
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVP-CLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~p-iilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~g 437 (504)
++++|||++++.+++.+..|+..+...... ..+.| +++|+||+|+...+.. .++..++++.++++ ++++||++ .|
T Consensus 82 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~-~~~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~g 159 (178)
T 2hxs_A 82 GVLLVYDITNYQSFENLEDWYTVVKKVSEE-SETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFS-SHFVSAKTGDS 159 (178)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHHH-HTCCCEEEEEEECGGGGGGCSSCHHHHHHHHHHHTCE-EEEECTTTCTT
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHhcc-cCCCCeEEEEEEccccccccccCHHHHHHHHHHcCCc-EEEEeCCCCCC
Confidence 999999999999999999999888764210 11445 8999999999765544 34788899999986 99999999 99
Q ss_pred HHHHHHHHHHHHhCCC
Q 010673 438 LNNVFSRIIWAAEHPH 453 (504)
Q Consensus 438 i~el~~~l~~~~~~~~ 453 (504)
++++|++|.+.+...+
T Consensus 160 i~~l~~~l~~~~~~~~ 175 (178)
T 2hxs_A 160 VFLCFQKVAAEILGIK 175 (178)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999886544
No 38
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=99.91 E-value=1.2e-23 Score=193.19 Aligned_cols=166 Identities=18% Similarity=0.291 Sum_probs=140.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...++|+|+|.+|||||||+++|++..+...+.+|.+.++....+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 13 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 90 (195)
T 1x3s_A 13 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLT--PSYYRGAQG 90 (195)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCCSEEEEEEEEEETTEEEEEEEEEECSSGGGCCSH--HHHHTTCCE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHcCCCCccCCCccceEEEEEEEEECCeEEEEEEEeCCCchhhhhhh--HHHhccCCE
Confidence 456899999999999999999999999888888888887877778887555677789999987776665 568899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
+|+|||++++.++..+..|+..+..... ..++|+++|+||+|+.......++..++++.++++ ++++||++ .|+++
T Consensus 91 ii~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~ 167 (195)
T 1x3s_A 91 VILVYDVTRRDTFVKLDNWLNELETYCT--RNDIVNMLVGNKIDKENREVDRNEGLKFARKHSML-FIEASAKTCDGVQC 167 (195)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHTTCCS--CSCCEEEEEEECTTSSSCCSCHHHHHHHHHHTTCE-EEECCTTTCTTHHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC--cCCCcEEEEEECCcCcccccCHHHHHHHHHHcCCE-EEEecCCCCCCHHH
Confidence 9999999999999999999998876421 24799999999999965444455788899999986 99999999 99999
Q ss_pred HHHHHHHHHhCC
Q 010673 441 VFSRIIWAAEHP 452 (504)
Q Consensus 441 l~~~l~~~~~~~ 452 (504)
+|++|.+.+...
T Consensus 168 l~~~l~~~~~~~ 179 (195)
T 1x3s_A 168 AFEELVEKIIQT 179 (195)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHhh
Confidence 999999988643
No 39
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=99.91 E-value=7.3e-24 Score=189.44 Aligned_cols=160 Identities=21% Similarity=0.320 Sum_probs=113.6
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEE
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTI 363 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ii 363 (504)
.+||+++|++|||||||+++|++..+... .++.+..+ ...+.+++....+.+||++|.+.+..+. ..+++.+|+++
T Consensus 2 ~~ki~~vG~~~~GKSsli~~l~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~i~D~~g~~~~~~~~--~~~~~~~~~~i 77 (166)
T 3q72_A 2 VYKVLLLGAPGVGKSALARIFGGVEDGPE-AEAAGHTY-DRSIVVDGEEASLMVYDIWEQDGGRWLP--GHCMAMGDAYV 77 (166)
T ss_dssp CCEEEEEESTTSSHHHHHHHHCCC-----------CEE-EEEEEETTEEEEEEEEECC-----------------CCEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHcCccccCC-CCccccce-EEEEEECCEEEEEEEEECCCCccchhhh--hhhhhhCCEEE
Confidence 57999999999999999999998776533 34555444 3446666455566789999988777666 45889999999
Q ss_pred EEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH-HHHHHHHHhCCCCeEEEeccc-cCHHHH
Q 010673 364 FVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ-DSARVTQELGIEPPIPVSMKS-KDLNNV 441 (504)
Q Consensus 364 lV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~-~~~~~~~~~~~~~~~~vSak~-~gi~el 441 (504)
+|||++++.+++.+..|+..+..... ..++|+++|+||+|+...+.... ....++..++.+ ++++||++ .|++++
T Consensus 78 ~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~l 154 (166)
T 3q72_A 78 IVYSVTDKGSFEKASELRVQLRRARQ--TDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCK-FIETSAALHHNVQAL 154 (166)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHCC-----CCCEEEEEECTTCCSSCCSCHHHHHHHHHHTTCE-EEECBGGGTBSHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEeccccccccccCHHHHHHHHHHhCCc-EEEeccCCCCCHHHH
Confidence 99999999999999999999876522 35799999999999987665544 778899999986 99999999 999999
Q ss_pred HHHHHHHHh
Q 010673 442 FSRIIWAAE 450 (504)
Q Consensus 442 ~~~l~~~~~ 450 (504)
|++|.+.+.
T Consensus 155 ~~~l~~~~~ 163 (166)
T 3q72_A 155 FEGVVRQIR 163 (166)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998774
No 40
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=99.91 E-value=2.6e-23 Score=190.59 Aligned_cols=165 Identities=13% Similarity=0.246 Sum_probs=139.6
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEE-EEEEEcCCC---------cEEEEEEecCChhhHhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYA-VNVVDQPGG---------NKKTLILQEIPEEGVKKIL 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~-~~~v~~~~~---------~~~~li~d~~g~~~~~~~~ 350 (504)
....+||+|+|++|||||||+++|++..+...+.+|.+.++. ...+.+++. ...+.+||++|.+.+..+.
T Consensus 8 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~ 87 (195)
T 3bc1_A 8 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGLERFRSLT 87 (195)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCCCCSEEEEEEEEEECTTSCCCSSCCCEEEEEEEEEECCSGGGHHHH
T ss_pred cceeEEEEEECCCCCCHHHHHHHHhcCCCCcCcccccceeeeeEEEEEecCCcccccccCcEEEEEEEeCCCcHHHHHHH
Confidence 356799999999999999999999999888777788887776 566777643 4577889999998777765
Q ss_pred hhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeE
Q 010673 351 SNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPI 429 (504)
Q Consensus 351 ~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~ 429 (504)
..+++.+|++|+|||++++.++..+..|+..+..... ..++|+++|+||+|+...+.. .+..++++..++++ ++
T Consensus 88 --~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 162 (195)
T 3bc1_A 88 --TAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAY--SENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIP-YF 162 (195)
T ss_dssp --HHTTTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSS--SSSCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCC-EE
T ss_pred --HHHHcCCCEEEEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECcccccccccCHHHHHHHHHHcCCC-EE
Confidence 5688999999999999999999999999999887531 258999999999999765444 34788899999986 99
Q ss_pred EEeccc-cCHHHHHHHHHHHHh
Q 010673 430 PVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 430 ~vSak~-~gi~el~~~l~~~~~ 450 (504)
++||++ .|++++|+.|.+.+.
T Consensus 163 ~~Sa~~~~~v~~l~~~l~~~~~ 184 (195)
T 3bc1_A 163 ETSAANGTNISHAIEMLLDLIM 184 (195)
T ss_dssp ECCTTTCTTHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHH
Confidence 999999 999999999998874
No 41
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=99.91 E-value=1e-23 Score=188.13 Aligned_cols=161 Identities=22% Similarity=0.333 Sum_probs=134.6
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEE
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTI 363 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ii 363 (504)
.+||+|+|++|||||||+++|+++.+...+.+|++..+ ...+.+++....+.+||++|.+.+..+. ..+++.+|+++
T Consensus 3 ~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~~~~i 79 (167)
T 1kao_A 3 EYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFY-RKEIEVDSSPSVLEILDTAGTEQFASMR--DLYIKNGQGFI 79 (167)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCCTTCCHHHH--HHHHHHCSEEE
T ss_pred EEEEEEECCCCCCHHHHHHHHHcCCCcccCCCCcceeE-EEEEEECCEEEEEEEEECCCchhhHHHH--HHHhccCCEEE
Confidence 58999999999999999999999998887778777644 4556777444567789999987777665 45788999999
Q ss_pred EEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHHHH
Q 010673 364 FVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLNNV 441 (504)
Q Consensus 364 lV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~el 441 (504)
+|||++++.+++.+..|+..+..... ..+.|+++|+||+|+...++. ..+..++++.++++ ++++||++ .|++++
T Consensus 80 ~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~l 156 (167)
T 1kao_A 80 LVYSLVNQQSFQDIKPMRDQIIRVKR--YEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCP-FMETSAKSKTMVDEL 156 (167)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHHTT--TSCCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTSC-EEEECTTCHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECCcccccccCCHHHHHHHHHHhCCC-EEEecCCCCcCHHHH
Confidence 99999999999999999988876532 348999999999999765554 34788899999986 99999999 999999
Q ss_pred HHHHHHHHh
Q 010673 442 FSRIIWAAE 450 (504)
Q Consensus 442 ~~~l~~~~~ 450 (504)
+++|.+.+.
T Consensus 157 ~~~l~~~~~ 165 (167)
T 1kao_A 157 FAEIVRQMN 165 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998764
No 42
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=99.91 E-value=1.4e-23 Score=190.07 Aligned_cols=160 Identities=19% Similarity=0.253 Sum_probs=126.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+++|++|||||||+++|+++.+.. +.+|++..+ .+.+.+++....+.+||++|++. ..+++++|+
T Consensus 5 ~~~~ki~~vG~~~vGKTsli~~l~~~~~~~-~~~t~~~~~-~~~~~~~~~~~~l~i~Dt~G~~~-------~~~~~~~d~ 75 (178)
T 2iwr_A 5 IPELRLGVLGDARSGKSSLIHRFLTGSYQV-LEKTESEQY-KKEMLVDGQTHLVLIREEAGAPD-------AKFSGWADA 75 (178)
T ss_dssp CCEEEEEEECCGGGCHHHHHHHHHHSCCCC-CSSCSSSEE-EEEEEETTEEEEEEEEECSSSCC-------HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCC-cCCCcceeE-EEEEEECCEEEEEEEEECCCCch-------hHHHHhCCE
Confidence 356899999999999999999999999876 667887655 45677774445567899998754 236678999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCC--CCccc-hHHHHHHHHHhCCCCeEEEeccc-cC
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLK--PYTMA-VQDSARVTQELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~--~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~g 437 (504)
+|+|||++++.+|..+..|+..+.........++|+++|+||+|+. ..+.. .++..++++.++..+++++||++ .|
T Consensus 76 ~ilv~D~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~~~v~~~~~~~~~~~~~~~~~~~~Sa~~~~~ 155 (178)
T 2iwr_A 76 VIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALXADMKRCSYYETXATYGLN 155 (178)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHCSSSCCCEEEEEEECTTCBTTBCCCSCHHHHHHHHHHHSSEEEEEEBTTTTBT
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECccccccccCcCCHHHHHHHHHhhcCCeEEEEeccccCC
Confidence 9999999999999999998776665432223589999999999994 23333 44788888887433499999999 99
Q ss_pred HHHHHHHHHHHHh
Q 010673 438 LNNVFSRIIWAAE 450 (504)
Q Consensus 438 i~el~~~l~~~~~ 450 (504)
++++|+.|.+.+.
T Consensus 156 i~~lf~~l~~~~~ 168 (178)
T 2iwr_A 156 VDRVFQEVAQKVV 168 (178)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998774
No 43
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=99.91 E-value=3.4e-23 Score=191.32 Aligned_cols=161 Identities=20% Similarity=0.293 Sum_probs=136.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCc-----------------------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGN----------------------------- 332 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~----------------------------- 332 (504)
+..+||+|+|.+|||||||+++|++..+...+.+|++..+....+.+++..
T Consensus 5 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (208)
T 3clv_A 5 KSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNINSINDDNNVIITNQHN 84 (208)
T ss_dssp CSSEEEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSCEEEEEEEETTC-------------------------------
T ss_pred CcceEEEEECCCCCCHHHHHHHHHhCcCCCCcCccccceeEEEEEEecCccccccccccccccccccccccccccccccc
Confidence 567999999999999999999999999888888898888888778877433
Q ss_pred --------EEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECC
Q 010673 333 --------KKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKD 404 (504)
Q Consensus 333 --------~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~ 404 (504)
..+.+||++|++.+..+. ..+++.+|++++|||++++.++..+..|+..+.... +.|+++|+||+
T Consensus 85 ~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~i~v~D~~~~~s~~~~~~~~~~i~~~~-----~~piilv~NK~ 157 (208)
T 3clv_A 85 NYNENLCNIKFDIWDTAGQERYASIV--PLYYRGATCAIVVFDISNSNTLDRAKTWVNQLKISS-----NYIIILVANKI 157 (208)
T ss_dssp CCCTTTCEEEEEEEECTTGGGCTTTH--HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHHHS-----CCEEEEEEECT
T ss_pred cccCccceeEEEEEECCCcHHHHHHH--HHHhcCCCEEEEEEECCCHHHHHHHHHHHHHHHhhC-----CCcEEEEEECC
Confidence 567789999987776665 568899999999999999999999999999988752 49999999999
Q ss_pred CCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 405 DLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 405 Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
|+.......+++.++++.++++ ++++||++ .|+++++++|.+.+.
T Consensus 158 D~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~~i~~l~~~l~~~~~ 203 (208)
T 3clv_A 158 DKNKFQVDILEVQKYAQDNNLL-FIQTSAKTGTNIKNIFYMLAEEIY 203 (208)
T ss_dssp TCC-CCSCHHHHHHHHHHTTCE-EEEECTTTCTTHHHHHHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHcCCc-EEEEecCCCCCHHHHHHHHHHHHH
Confidence 9433333345888999999986 99999999 999999999998764
No 44
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=99.91 E-value=1.3e-23 Score=187.63 Aligned_cols=163 Identities=23% Similarity=0.366 Sum_probs=133.4
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
..+||+|+|.+|||||||+++|++..+...+.+|++..+.. .+.+++....+.+||++|.+.+..++ ..+++.+|++
T Consensus 3 ~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~d~~ 79 (168)
T 1u8z_A 3 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRK-KVVLDGEEVQIDILDTAGQEDYAAIR--DNYFRSGEGF 79 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEE-EEEETTEEEEEEEEECCC---CHHHH--HHHHHHCSEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHhCccCCCCCCCcceEEEE-EEEECCEEEEEEEEECCCcchhHHHH--HHHhhcCCEE
Confidence 35899999999999999999999999887787888775543 45666444567789999987777665 4578999999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
++|||++++.++..+..|+..+..... ..++|+++|+||+|+...++. .++..++++.++++ ++++||++ .|+++
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~ 156 (168)
T 1u8z_A 80 LCVFSITEMESFAATADFREQILRVKE--DENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVN-YVETSAKTRANVDK 156 (168)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHC--CTTSCEEEEEECGGGGGGCCSCHHHHHHHHHHHTCE-EEECCTTTCTTHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCcEEEEEECccccccCccCHHHHHHHHHHcCCe-EEEeCCCCCCCHHH
Confidence 999999999999999999998877632 347999999999999765544 34788899999986 99999999 99999
Q ss_pred HHHHHHHHHhC
Q 010673 441 VFSRIIWAAEH 451 (504)
Q Consensus 441 l~~~l~~~~~~ 451 (504)
+|++|.+.+..
T Consensus 157 l~~~l~~~i~~ 167 (168)
T 1u8z_A 157 VFFDLMREIRA 167 (168)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999988753
No 45
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=99.91 E-value=1e-23 Score=193.71 Aligned_cols=164 Identities=18% Similarity=0.250 Sum_probs=139.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+.+....+.+||++|.+.+..++ ..+++.+|
T Consensus 22 ~~~~~ki~v~G~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 99 (193)
T 2oil_A 22 YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAIT--SAYYRGAV 99 (193)
T ss_dssp CSEEEEEEEESSTTSSHHHHHHHHHHSCCCSSCCCCSSEEEEEEEEEETTEEEEEEEEEESCCCTTCTTH--HHHHTTCC
T ss_pred cCcceEEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEeCCCchhhhhhh--HHHhccCC
Confidence 4667999999999999999999999999988888888887777777777555667789999987776665 55889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.++..+..|+..+.... ..++|+++|+||+|+...+.. ..+...++..++++ ++++||++ .|+
T Consensus 100 ~vi~v~D~~~~~s~~~~~~~l~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 175 (193)
T 2oil_A 100 GALLVFDLTKHQTYAVVERWLKELYDHA---EATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLL-FLETSALDSTNV 175 (193)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHTTS---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEEECTTTCTTH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCeEEEEEECCCcccccccCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999999887642 357999999999999765444 34788899999986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 176 ~~l~~~l~~~i~ 187 (193)
T 2oil_A 176 ELAFETVLKEIF 187 (193)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 46
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=99.91 E-value=7.7e-24 Score=191.81 Aligned_cols=166 Identities=18% Similarity=0.323 Sum_probs=138.1
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....++|+|+|.+|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 6 ~~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d 82 (181)
T 2fn4_A 6 PSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYT-KICSVDGIPARLDILDTAGQEEFGAMR--EQYMRAGH 82 (181)
T ss_dssp SSCEEEEEEEECTTSSHHHHHHHHHHSSCCSSCCTTCCEEEE-EEEEETTEEEEEEEEECCCTTTTSCCH--HHHHHHCS
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHhCcCccccCCCcCceEE-EEEEECCEEEEEEEEECCCchhhHHHH--HHHHhhCC
Confidence 456799999999999999999999999888888888887665 456677434567789999987776665 45788999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++++|||++++.++..+..|+..+..... ..++|+++|+||+|+...+.. ..+...++..++++ ++++||++ .|+
T Consensus 83 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~gv 159 (181)
T 2fn4_A 83 GFLLVFAINDRQSFNEVGKLFTQILRVKD--RDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVA-YFEASAKLRLNV 159 (181)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHHHT--SSCCCEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEECBTTTTBSH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECcccccccccCHHHHHHHHHHcCCe-EEEecCCCCCCH
Confidence 99999999999999999999988854421 357999999999999875555 34788889998886 99999999 999
Q ss_pred HHHHHHHHHHHhCC
Q 010673 439 NNVFSRIIWAAEHP 452 (504)
Q Consensus 439 ~el~~~l~~~~~~~ 452 (504)
++++++|.+.+...
T Consensus 160 ~~l~~~l~~~~~~~ 173 (181)
T 2fn4_A 160 DEAFEQLVRAVRKY 173 (181)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987543
No 47
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=99.91 E-value=7.1e-24 Score=194.97 Aligned_cols=164 Identities=18% Similarity=0.312 Sum_probs=131.5
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 23 ~~~~~ki~vvG~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d 100 (192)
T 2il1_A 23 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSIT--SAYYRSAK 100 (192)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHCC--------CCTTEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--HHHHHHCS
T ss_pred cCCceEEEEECCCCCCHHHHHHHHhcCCCCcCCCCccceeEEEEEEEECCeEEEEEEEeCCCcHHHHHHH--HHHhcCCC
Confidence 4567999999999999999999999999887778888877877778887444567789999988777765 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHh-CCCCeEEEeccc-cC
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQEL-GIEPPIPVSMKS-KD 437 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~-~~~~~~~vSak~-~g 437 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...++.. ++.+++++.+ +. +++++||++ .|
T Consensus 101 ~iilV~D~~~~~s~~~~~~~~~~i~~~~---~~~~piilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~~SA~~g~g 176 (192)
T 2il1_A 101 GIILVYDITKKETFDDLPKWMKMIDKYA---SEDAELLLVGNKLDCETDREITRQQGEKFAQQITGM-RFCEASAKDNFN 176 (192)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHTSTTC-EEEECBTTTTBS
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECcccccccccCHHHHHHHHHhcCCC-eEEEEeCCCCCC
Confidence 9999999999999999999988887652 3479999999999997655543 4778888875 55 489999999 99
Q ss_pred HHHHHHHHHHHHh
Q 010673 438 LNNVFSRIIWAAE 450 (504)
Q Consensus 438 i~el~~~l~~~~~ 450 (504)
++++|++|.+.+.
T Consensus 177 i~~l~~~l~~~i~ 189 (192)
T 2il1_A 177 VDEIFLKLVDDIL 189 (192)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 48
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=99.91 E-value=1.8e-23 Score=195.28 Aligned_cols=164 Identities=20% Similarity=0.311 Sum_probs=126.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCC--CCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhh-Hhhhhhhhhhcc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG-VKKILSNKEALA 357 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~--~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~-~~~~~~~~~~~~ 357 (504)
....+||+|+|++|||||||+++|++... ...+ ++++.++..+.+.+++....+.+||++|.+. ...+. ..+++
T Consensus 34 ~~~~~kVvlvG~~~vGKSSLl~r~~~~~~~~~~~~-~~~g~d~~~~~i~~~~~~~~l~~~Dt~g~~~~~~~l~--~~~~~ 110 (211)
T 2g3y_A 34 GNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDC-EVLGEDTYERTLMVDGESATIILLDMWENKGENEWLH--DHCMQ 110 (211)
T ss_dssp -CCEEEEEEECCTTSSHHHHHHHHHCCCCTTCCC----CCTTEEEEEEEETTEEEEEEEECCTTTTHHHHHHH--HCCCC
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHhCCCCCCCcC-CccceeeEEEEEEECCeeeEEEEeecCCCcchhhhHH--HHHHh
Confidence 34569999999999999999999997544 3333 4455556666777874444566788888765 33333 45778
Q ss_pred cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-
Q 010673 358 SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 358 ~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~- 435 (504)
.+|++|+|||++++.||+.+..|+..+..... ..++|+++|+||+|+...+++. ++.+.++..++++ +++|||++
T Consensus 111 ~a~~~ilVydvt~~~sf~~~~~~~~~l~~~~~--~~~~piilVgNK~DL~~~r~v~~~e~~~~a~~~~~~-~~e~SAk~g 187 (211)
T 2g3y_A 111 VGDAYLIVYSITDRASFEKASELRIQLRRARQ--TEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCK-FIETSAAVQ 187 (211)
T ss_dssp CCSEEEEEEETTCHHHHHHHHHHHHHHHTSGG--GTTSCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEECBTTTT
T ss_pred hCCEEEEEEECCCHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEEChHHhcCceEeHHHHHHHHHHcCCE-EEEEeCCCC
Confidence 99999999999999999999999888865321 2479999999999997655443 3677888889886 99999999
Q ss_pred cCHHHHHHHHHHHHh
Q 010673 436 KDLNNVFSRIIWAAE 450 (504)
Q Consensus 436 ~gi~el~~~l~~~~~ 450 (504)
.||+++|+.|++.+.
T Consensus 188 ~~v~elf~~l~~~i~ 202 (211)
T 2g3y_A 188 HNVKELFEGIVRQVR 202 (211)
T ss_dssp BSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999874
No 49
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=99.91 E-value=7.4e-24 Score=196.23 Aligned_cols=164 Identities=21% Similarity=0.350 Sum_probs=129.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 22 ~~~~~ki~v~G~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d 99 (200)
T 2o52_A 22 SDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVT--RSYYRGAA 99 (200)
T ss_dssp CCEEEEEEEEESTTSSHHHHHHHHHC------------CCEEEEEEEETTEEEEEEEECCTTHHHHSCCC--HHHHTTCS
T ss_pred cCcceEEEEECcCCCCHHHHHHHHHhCCCCccCCCcccceeEEEEEEECCeeeEEEEEcCCCcHhHHHHH--HHHhccCC
Confidence 3567999999999999999999999999888887888877777778887444567789999987776655 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+... .+..++++.++++ ++++||++ .|+
T Consensus 100 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~SA~~g~gi 175 (200)
T 2o52_A 100 GALLVYDITSRETYNSLAAWLTDARTLA---SPNIVVILCGNKKDLDPEREVTFLEASRFAQENELM-FLETSALTGENV 175 (200)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHT---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEEECTTTCTTH
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECCCcccccccCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999999887652 3579999999999997655443 4788899999986 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 176 ~~l~~~l~~~i~ 187 (200)
T 2o52_A 176 EEAFLKCARTIL 187 (200)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998874
No 50
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=99.91 E-value=2.9e-23 Score=189.52 Aligned_cols=164 Identities=20% Similarity=0.341 Sum_probs=135.5
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+|+|++..+...+.+|+...+ ...+.+++....+.+||++|.+.+..++ ..++..+|+
T Consensus 2 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~~ 78 (189)
T 4dsu_A 2 STEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMR--DQYMRTGEG 78 (189)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHHSSCCCCCCTTCCEEE-EEEEEETTEEEEEEEEECCCC---CTTH--HHHHHHCSE
T ss_pred CcEEEEEEECCCCCCHHHHHHHHHhCCCCCCCCCCchheE-EEEEEECCcEEEEEEEECCCcHHHHHHH--HHHHhcCCE
Confidence 3568999999999999999999999998887877776544 3446666444456689999988777766 457889999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
+++|||++++.++..+..|+..+..... ..+.|+++|+||+|+.......+....+++.++++ ++++||++ .|+++
T Consensus 79 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gi~~ 155 (189)
T 4dsu_A 79 FLCVFAINNTKSFEDIHHYREQIKRVKD--SEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIP-FIETSAKTRQGVDD 155 (189)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHTT--CSCCCEEEEEECTTSSSCSSCHHHHHHHHHHHTCC-EEECCTTTCTTHHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCcEEEEEECccCcccccCHHHHHHHHHHcCCe-EEEEeCCCCCCHHH
Confidence 9999999999999999999998877532 45899999999999987666666889999999987 99999999 99999
Q ss_pred HHHHHHHHHhC
Q 010673 441 VFSRIIWAAEH 451 (504)
Q Consensus 441 l~~~l~~~~~~ 451 (504)
+|++|.+.+..
T Consensus 156 l~~~l~~~~~~ 166 (189)
T 4dsu_A 156 AFYTLVREIRK 166 (189)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998753
No 51
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=99.91 E-value=1.1e-23 Score=190.32 Aligned_cols=163 Identities=21% Similarity=0.372 Sum_probs=138.2
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+...+ ..++..+|+
T Consensus 12 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 89 (179)
T 2y8e_A 12 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI--PSYIRDSTV 89 (179)
T ss_dssp CEEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGS--HHHHHTCSE
T ss_pred CcceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCceeeEEEEEEEEECCeEEEEEEEECCCcHHHHHHH--HHHhcCCCE
Confidence 356899999999999999999999999888888888877777778887444567789999987777665 457899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.++..+..|+..+.... ..++|+++|+||+|+...+... .+...++..++.+ ++++||++ .|++
T Consensus 90 ~i~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~~i~ 165 (179)
T 2y8e_A 90 AVVVYDITNTNSFHQTSKWIDDVRTER---GSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVM-FIETSAKAGYNVK 165 (179)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHH---TTSSEEEEEEECGGGGGGCCSCHHHHHHHHHHHTCE-EEEEBTTTTBSHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECCcccccCcCCHHHHHHHHHHcCCe-EEEEeCCCCCCHH
Confidence 999999999999999999998887652 3479999999999997655543 4778888999986 99999999 9999
Q ss_pred HHHHHHHHHHh
Q 010673 440 NVFSRIIWAAE 450 (504)
Q Consensus 440 el~~~l~~~~~ 450 (504)
++++.|.+.+.
T Consensus 166 ~l~~~l~~~~~ 176 (179)
T 2y8e_A 166 QLFRRVAAALP 176 (179)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHHHh
Confidence 99999988653
No 52
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=99.91 E-value=2e-23 Score=190.69 Aligned_cols=162 Identities=17% Similarity=0.271 Sum_probs=130.7
Q ss_pred cccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccc
Q 010673 279 QTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALAS 358 (504)
Q Consensus 279 ~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ 358 (504)
......+||+|+|++|||||||+++|+++.+...+.+|.+ .+. ..+.+++....+.+||++|.+.+. +++.
T Consensus 15 ~~~~~~~ki~ivG~~~vGKSsL~~~~~~~~~~~~~~~t~~-~~~-~~~~~~~~~~~l~i~Dt~G~~~~~-------~~~~ 85 (184)
T 3ihw_A 15 YFQGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFK-KEIVVDGQSYLLLIRDEGGPPELQ-------FAAW 85 (184)
T ss_dssp -CCCCEEEEEEECCTTSCHHHHHHHHHHSSCCCCCCTTCE-EEE-EEEEETTEEEEEEEEECSSSCCHH-------HHHH
T ss_pred CCCCCeeEEEEECCCCCCHHHHHHHHhcCCCCCCcCCCcc-eEE-EEEEECCEEEEEEEEECCCChhhh-------eecC
Confidence 3456789999999999999999999999998877777743 343 567777444556679999886554 5678
Q ss_pred ccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCC--CCccc-hHHHHHHHHHhCCCCeEEEeccc
Q 010673 359 CDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLK--PYTMA-VQDSARVTQELGIEPPIPVSMKS 435 (504)
Q Consensus 359 ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~--~~~~~-~~~~~~~~~~~~~~~~~~vSak~ 435 (504)
+|++++|||++++.+|+.+..|+..+..... ..++|+++|+||+|+. ..+.. .++..++++.++..++++|||++
T Consensus 86 ~~~~i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~v~~~~~~~~~~~~~~~~~~e~Sa~~ 163 (184)
T 3ihw_A 86 VDAVVFVFSLEDEISFQTVYNYFLRLCSFRN--ASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATY 163 (184)
T ss_dssp CSEEEEEEETTCHHHHHHHHHHHHHHHTTSC--GGGSCEEEEEECTTCBTTBCCCSCHHHHHHHHHHTTTCEEEEEBTTT
T ss_pred CCEEEEEEECcCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECcccccccccccCHHHHHHHHHHcCCCeEEEecCCC
Confidence 9999999999999999999999999986521 2478999999999994 23333 44888999999844599999999
Q ss_pred -cCHHHHHHHHHHHHhC
Q 010673 436 -KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 436 -~gi~el~~~l~~~~~~ 451 (504)
.||+++|++|++.+..
T Consensus 164 ~~gv~~lf~~l~~~i~~ 180 (184)
T 3ihw_A 164 GLNVERVFQDVAQKVVA 180 (184)
T ss_dssp TBTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 9999999999987753
No 53
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=99.91 E-value=8.7e-24 Score=197.34 Aligned_cols=165 Identities=18% Similarity=0.341 Sum_probs=137.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 7 ~~~~ki~i~G~~~~GKTsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 83 (212)
T 2j0v_A 7 SKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGQIVNLGLWDTAGQEDYSRLR--PLSYRGADI 83 (212)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCSSCCCEE-EEEECSSCEEEEEEECCCCCCCCCC----CGGGTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCCCCccCCCccceeEE-EEEEECCEEEEEEEEECCCcHHHHHHH--HhhccCCCE
Confidence 45799999999999999999999999988888888887664 346677555677789999988777665 458899999
Q ss_pred EEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCcc---------chHHHHHHHHHhCCCCeEEE
Q 010673 362 TIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM---------AVQDSARVTQELGIEPPIPV 431 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~---------~~~~~~~~~~~~~~~~~~~v 431 (504)
+|+|||++++.+|+.+. .|+..+... .+++|+++|+||+|+..... ..++..++++.++..+++++
T Consensus 84 ~ilv~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 159 (212)
T 2j0v_A 84 FVLAFSLISKASYENVLKKWMPELRRF----APNVPIVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIEC 159 (212)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----CTTCCEEEEEECHHHHTCHHHHHTCSSCCCHHHHHHHHHHHTCSEEEEC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEeCHHhhhCccccccccCCCCHHHHHHHHHHcCCceEEEc
Confidence 99999999999999986 799988876 45899999999999976543 24578889999997559999
Q ss_pred eccc-cCHHHHHHHHHHHHhCCC
Q 010673 432 SMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 432 Sak~-~gi~el~~~l~~~~~~~~ 453 (504)
||++ .|++++|++|.+.+..+.
T Consensus 160 Sa~~g~gi~~l~~~l~~~~~~~~ 182 (212)
T 2j0v_A 160 SSKTQQNVKAVFDTAIKVVLQPP 182 (212)
T ss_dssp CTTTCTTHHHHHHHHHHHHHCC-
T ss_pred cCCCCCCHHHHHHHHHHHHhhhh
Confidence 9999 999999999999987654
No 54
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=99.91 E-value=7.6e-24 Score=195.88 Aligned_cols=165 Identities=18% Similarity=0.273 Sum_probs=127.5
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+++....+.+||++|.+.+...+ ..+++.+|
T Consensus 25 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d 102 (199)
T 2p5s_A 25 SQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIA--KSYFRKAD 102 (199)
T ss_dssp ---CEEEEEESSTTSSHHHHHHHHHHCCCC----------CEEEEEEETTEEEEEEEEECTTCTTCHHHH--HHHHHHCS
T ss_pred cCCCeEEEEECcCCCCHHHHHHHHHhCCCCccCCCCccceeEEEEEEECCEEEEEEEEECCCCcchhhhH--HHHHhhCC
Confidence 4567999999999999999999999999877777888877777778887555667789999987777665 55789999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCC------CCccc-hHHHHHHHHHhCCCCeEEEec
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLK------PYTMA-VQDSARVTQELGIEPPIPVSM 433 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~------~~~~~-~~~~~~~~~~~~~~~~~~vSa 433 (504)
++|+|||++++.++..+..|+..+.... ..++|+++|+||+|+. ..+.. .+..+++++.++++ ++++||
T Consensus 103 ~iilv~d~~~~~s~~~~~~~~~~i~~~~---~~~~piilv~NK~Dl~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~SA 178 (199)
T 2p5s_A 103 GVLLLYDVTCEKSFLNIREWVDMIEDAA---HETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGAL-FCETSA 178 (199)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHC------CCEEEEEECGGGHHHHHHTTCCCCCHHHHHHHHHHHTCE-EEECCT
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHHhc---CCCCCEEEEEECcccccccccccccccCHHHHHHHHHHcCCe-EEEeeC
Confidence 9999999999999999999998887652 2479999999999996 22333 44788899999986 999999
Q ss_pred cc-cCHHHHHHHHHHHHhC
Q 010673 434 KS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~~ 451 (504)
++ .|++++|++|.+.+..
T Consensus 179 ~~g~gv~el~~~l~~~i~~ 197 (199)
T 2p5s_A 179 KDGSNIVEAVLHLAREVKK 197 (199)
T ss_dssp TTCTTHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 99 9999999999988753
No 55
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=99.91 E-value=3.1e-23 Score=192.26 Aligned_cols=165 Identities=22% Similarity=0.365 Sum_probs=138.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....++|+|+|.+|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..++..+|
T Consensus 11 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~~ 87 (206)
T 2bov_A 11 SLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIR--DNYFRSGE 87 (206)
T ss_dssp CCCEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCTTCCEEEE-EEEEETTEEEEEEEEECCCTTCCHHHH--HHHHHHCS
T ss_pred CCceEEEEEECCCCCCHHHHHHHHHhCCCCCCCCCccceEEE-EEEEECCEEEEEEEEcCCChhhhHHHH--HHHHhhCC
Confidence 456799999999999999999999999988888888887554 446666444567789999987777665 45788999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++++|||++++.++..+..|+..+..... ..++|+++|+||+|+...++. .++..++++.++++ ++++||++ .|+
T Consensus 88 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~gi 164 (206)
T 2bov_A 88 GFLCVFSITEMESFAATADFREQILRVKE--DENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVN-YVETSAKTRANV 164 (206)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHHTT--CSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCE-EEEECTTTCTTH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEeccCccccccccHHHHHHHHHHhCCe-EEEEeCCCCCCH
Confidence 99999999999999999999999887632 348999999999999875544 34788899999986 99999999 999
Q ss_pred HHHHHHHHHHHhC
Q 010673 439 NNVFSRIIWAAEH 451 (504)
Q Consensus 439 ~el~~~l~~~~~~ 451 (504)
+++|++|.+.+..
T Consensus 165 ~~l~~~l~~~i~~ 177 (206)
T 2bov_A 165 DKVFFDLMREIRA 177 (206)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 56
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.3e-23 Score=197.93 Aligned_cols=166 Identities=22% Similarity=0.295 Sum_probs=133.5
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....++|+|+|++|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 10 ~~~~~ki~v~G~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 87 (223)
T 3cpj_B 10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQERYRAIT--SAYYRGAV 87 (223)
T ss_dssp CCEEEEEEEESCTTSSHHHHHHHHHHCCCCC------CCSEEEEEEEETTEEEEEEEECCTTTTTTTCCC--GGGTTTCC
T ss_pred CCeeeEEEEECcCCCCHHHHHHHHhcCCCCCCCCCcccceeEEEEEEECCEEEEEEEEECCCccchhhhH--HHHhccCC
Confidence 3567999999999999999999999999988888888887887778887444567789999987776665 56889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+|+.+..|+..+.... ..++|+++|+||+|+...+... ++..++++.++++ ++++||++ .||
T Consensus 88 ~vilV~D~~~~~s~~~~~~~l~~i~~~~---~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~gi 163 (223)
T 3cpj_B 88 GALIVYDISKSSSYENCNHWLSELRENA---DDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLL-FTETSALNSENV 163 (223)
T ss_dssp EEEEEEC-CCHHHHHHHHHHHHHHHHHC---C--CEEEEEECCGGGGGGCCSCHHHHHHHHHHTTCE-EEECCCC-CCCH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHhC---CCCCeEEEEEECcccccccccCHHHHHHHHHHcCCE-EEEEeCCCCCCH
Confidence 9999999999999999999999987652 3478999999999997655443 4788899999886 99999999 999
Q ss_pred HHHHHHHHHHHhCC
Q 010673 439 NNVFSRIIWAAEHP 452 (504)
Q Consensus 439 ~el~~~l~~~~~~~ 452 (504)
+++|++|.+.+...
T Consensus 164 ~~l~~~l~~~i~~~ 177 (223)
T 3cpj_B 164 DKAFEELINTIYQK 177 (223)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988643
No 57
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=99.91 E-value=1.8e-23 Score=193.35 Aligned_cols=166 Identities=19% Similarity=0.325 Sum_probs=127.5
Q ss_pred cccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccc
Q 010673 279 QTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALAS 358 (504)
Q Consensus 279 ~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ 358 (504)
......+||+|+|.+|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..++.+
T Consensus 15 ~~~~~~~ki~~~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~ 91 (201)
T 2q3h_A 15 GAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRPVRLQLCDTAGQDEFDKLR--PLCYTN 91 (201)
T ss_dssp -----CEEEEEECSTTSSHHHHHHHHHC--------CCSSEEEE-EEEEETTEEEEEEEEECCCSTTCSSSG--GGGGTT
T ss_pred CCCCcceEEEEECCCCCCHHHHHHHHHhCCCCCCCCCcccceeE-EEEEECCEEEEEEEEECCCCHHHHHHh--HhhcCC
Confidence 44567899999999999999999999999888778888887554 346666333456689999988777665 458899
Q ss_pred ccEEEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCC------------cc-chHHHHHHHHHhC
Q 010673 359 CDVTIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPY------------TM-AVQDSARVTQELG 424 (504)
Q Consensus 359 ad~iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~------------~~-~~~~~~~~~~~~~ 424 (504)
+|++++|||++++.++..+. .|+..+... ..++|+++|+||+|+... +. ..++...+++.++
T Consensus 92 ~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 167 (201)
T 2q3h_A 92 TDIFLLCFSVVSPSSFQNVSEKWVPEIRCH----CPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLLAEEIK 167 (201)
T ss_dssp CSEEEEEEETTCHHHHHHHHHTHHHHHHHH----CSSSCEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHT
T ss_pred CcEEEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEECHhhhhchhhhhhhcccccccCCHHHHHHHHHhcC
Confidence 99999999999999999986 799888876 458999999999999753 22 2347888999999
Q ss_pred CCCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 425 IEPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 425 ~~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
..++++|||++ .|++++|++|.+.+..
T Consensus 168 ~~~~~~~Sa~~g~gi~~l~~~l~~~~~~ 195 (201)
T 2q3h_A 168 AASYIECSALTQKNLKEVFDAAIVAGIQ 195 (201)
T ss_dssp CSEEEECCTTTCTTHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCCCHHHHHHHHHHHHhc
Confidence 85599999999 9999999999988754
No 58
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=99.90 E-value=4.7e-23 Score=191.30 Aligned_cols=167 Identities=18% Similarity=0.287 Sum_probs=137.6
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
.+..++|+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 5 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 82 (207)
T 1vg8_A 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLG--VAFYRGAD 82 (207)
T ss_dssp --CEEEEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEESSSCEEEEEEEEECSSGGGSCSC--CGGGTTCS
T ss_pred cCcceEEEEECcCCCCHHHHHHHHHcCCCCCCCCCcccceEEEEEEEECCEEEEEEEEeCCCcHHHHHhH--HHHHhCCc
Confidence 3567999999999999999999999999888888888887887788888555677889999987776665 45889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhcc-CCCCCCcEEEEEECCCCCCCccchHHHHHHHH-HhCCCCeEEEeccc-cC
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGE-DSGYGVPCLLIASKDDLKPYTMAVQDSARVTQ-ELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~-~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~-~~~~~~~~~vSak~-~g 437 (504)
++|+|||++++.++..+..|+..+..... ....++|+++|+||+|+.......+....++. ..+. +++++||++ .|
T Consensus 83 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~~Sa~~g~g 161 (207)
T 1vg8_A 83 CCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNI-PYFETSAKEAIN 161 (207)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHCCSSGGGSCEEEEEECTTSSCCCSCHHHHHHHHHHTTSC-CEEECBTTTTBS
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcccccCCCCcEEEEEECCCCcccccCHHHHHHHHHhcCCc-eEEEEeCCCCCC
Confidence 99999999999999999999988876521 00147899999999999854444557778887 4445 499999999 99
Q ss_pred HHHHHHHHHHHHh
Q 010673 438 LNNVFSRIIWAAE 450 (504)
Q Consensus 438 i~el~~~l~~~~~ 450 (504)
++++|++|.+.+.
T Consensus 162 i~~l~~~l~~~~~ 174 (207)
T 1vg8_A 162 VEQAFQTIARNAL 174 (207)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998874
No 59
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=99.90 E-value=2.6e-23 Score=193.47 Aligned_cols=162 Identities=20% Similarity=0.281 Sum_probs=135.1
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+.+..+. ..+++.+|+
T Consensus 26 ~~~~ki~vvG~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 102 (205)
T 1gwn_A 26 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPYYDNVR--PLSYPDSDA 102 (205)
T ss_dssp -CEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEESSSSEEEEEEEEECCSGGGTTTG--GGGCTTCSE
T ss_pred ceeeEEEEECCCCCCHHHHHHHHhcCCCCCCcCCccceeEE-EEEEECCEEEEEEEEeCCCcHhhhHHH--HhhccCCCE
Confidence 45789999999999999999999999998888888887664 456777555677889999998777665 458899999
Q ss_pred EEEEEeCCCcccHHHH-HHHHHHHHHhccCCCCCCcEEEEEECCCCCCC------------ccc-hHHHHHHHHHhCCCC
Q 010673 362 TIFVYDSSDEYSWKRT-KELLVEVARLGEDSGYGVPCLLIASKDDLKPY------------TMA-VQDSARVTQELGIEP 427 (504)
Q Consensus 362 iilV~D~s~~~s~~~~-~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~------------~~~-~~~~~~~~~~~~~~~ 427 (504)
+|+|||++++.+|..+ ..|+..+... ..+.|+++|+||+|+... +.+ .++..++++.++..+
T Consensus 103 ~ilv~D~~~~~s~~~~~~~~~~~i~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 178 (205)
T 1gwn_A 103 VLICFDISRPETLDSVLKKWKGEIQEF----CPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAAT 178 (205)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----CTTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHH----CCCCCEEEEEechhhccchhhhhhhcccccCCCCHHHHHHHHHHcCCCE
Confidence 9999999999999998 7898888776 458999999999999742 222 347889999988545
Q ss_pred eEEEecc-c-cCHHHHHHHHHHHHh
Q 010673 428 PIPVSMK-S-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 428 ~~~vSak-~-~gi~el~~~l~~~~~ 450 (504)
+++|||+ + .||+++|+.|.+.+.
T Consensus 179 ~~e~SAk~~~~gv~~lf~~l~~~~l 203 (205)
T 1gwn_A 179 YIECSALQSENSVRDIFHVATLACV 203 (205)
T ss_dssp EEECCTTTCHHHHHHHHHHHHHHHH
T ss_pred EEEeeeccCCcCHHHHHHHHHHHHh
Confidence 9999999 6 899999999998764
No 60
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=99.90 E-value=4.1e-23 Score=189.17 Aligned_cols=164 Identities=18% Similarity=0.318 Sum_probs=135.6
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHh-hhhhhhhhcccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK-KILSNKEALASC 359 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~-~~~~~~~~~~~a 359 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++....+.+||++|.+.+. .+. ..+++.+
T Consensus 17 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~~--~~~~~~~ 94 (189)
T 1z06_A 17 RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMV--QHYYRNV 94 (189)
T ss_dssp --CEEEEEEECCTTSSHHHHHHHHHHSSCCSSCCCCCSCCEEEEEEEETTEEEEEEEEECCCSHHHHTTTH--HHHHTTC
T ss_pred CCceEEEEEECCCCCCHHHHHHHHHcCCCCCCCCCCcceEEEEEEEEECCEEEEEEEEECCCchhhhhhhh--HHHhcCC
Confidence 4567999999999999999999999999888888888887877778887444677889999987776 554 5578999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc---
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS--- 435 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~--- 435 (504)
|++|+|||++++.++..+..|+..+..... ..++|+++|+||+|+...++. .+..+++++.++++ ++++||++
T Consensus 95 d~iilv~D~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~~ 171 (189)
T 1z06_A 95 HAVVFVYDMTNMASFHSLPAWIEECKQHLL--ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMP-LFETSAKNPND 171 (189)
T ss_dssp CEEEEEEETTCHHHHHTHHHHHHHHHHHCC--CSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCC-EEECCSSSGGG
T ss_pred CEEEEEEECcCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECccccccceeCHHHHHHHHHHcCCE-EEEEeCCcCCc
Confidence 999999999999999999999999887632 357999999999999765554 34788899999986 99999998
Q ss_pred -cCHHHHHHHHHHHH
Q 010673 436 -KDLNNVFSRIIWAA 449 (504)
Q Consensus 436 -~gi~el~~~l~~~~ 449 (504)
.|++++|++|.+.+
T Consensus 172 ~~~i~~l~~~l~~~i 186 (189)
T 1z06_A 172 NDHVEAIFMTLAHKL 186 (189)
T ss_dssp GSCHHHHHHHHC---
T ss_pred ccCHHHHHHHHHHHH
Confidence 58999999998765
No 61
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=99.90 E-value=1.6e-23 Score=196.26 Aligned_cols=165 Identities=12% Similarity=0.208 Sum_probs=137.5
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCC----------cEEEEEEecCChhhHhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGG----------NKKTLILQEIPEEGVKKIL 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~----------~~~~li~d~~g~~~~~~~~ 350 (504)
....+||+|+|.+|||||||+++|++..+...+.+|++.++....+.+++. ...+.+||++|.+.+..++
T Consensus 22 ~~~~~ki~vvG~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~ 101 (217)
T 2f7s_A 22 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLT 101 (217)
T ss_dssp CSEEEEEEEESCTTSSHHHHHHHHHCSCCCCEEEEEEEEEEEEEEEEEEC-------CCEEEEEEEEEEEESHHHHHHHH
T ss_pred cceeEEEEEECcCCCCHHHHHHHHhcCCCCcCCCCceeEEEEEEEEEECCccccccccCceeEEEEEEECCCcHhHHhHH
Confidence 456799999999999999999999999887777777777676666666633 4667789999998877765
Q ss_pred hhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeE
Q 010673 351 SNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPI 429 (504)
Q Consensus 351 ~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~ 429 (504)
..+++.+|++|+|||++++.++..+..|+..+..... ..++|+++|+||+|+...+.. .++.+++++.++++ ++
T Consensus 102 --~~~~~~~d~iilV~D~~~~~s~~~~~~~l~~i~~~~~--~~~~piilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~ 176 (217)
T 2f7s_A 102 --TAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY--CENPDIVLIGNKADLPDQREVNERQARELADKYGIP-YF 176 (217)
T ss_dssp --HHHHTTCCEEEEEEETTCHHHHHHHHHHHHTCCCCCT--TTCCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCC-EE
T ss_pred --HHHhcCCCEEEEEEECcCHHHHHHHHHHHHHHHHhcC--cCCCCEEEEEECCccccccccCHHHHHHHHHHCCCc-EE
Confidence 5688999999999999999999999999887754321 258999999999999775554 34888999999986 99
Q ss_pred EEeccc-cCHHHHHHHHHHHHh
Q 010673 430 PVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 430 ~vSak~-~gi~el~~~l~~~~~ 450 (504)
++||++ .|++++|++|.+.+.
T Consensus 177 ~~Sa~~g~gi~~l~~~l~~~i~ 198 (217)
T 2f7s_A 177 ETSAATGQNVEKAVETLLDLIM 198 (217)
T ss_dssp EEBTTTTBTHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHH
Confidence 999999 999999999998774
No 62
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=99.90 E-value=9.5e-23 Score=181.46 Aligned_cols=161 Identities=19% Similarity=0.332 Sum_probs=133.8
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEE
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTI 363 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ii 363 (504)
.++|+++|.+|||||||+++|.+..+...+.+|++..+ ...+..++....+.+||++|.+.+..+. ..++..+|+++
T Consensus 3 ~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~G~~~~~~~~--~~~~~~~~~~i 79 (166)
T 2ce2_X 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDECDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMR--DQYMRTGEGFL 79 (166)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHSSCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCCCSSCCHHH--HHHHHHCSEEE
T ss_pred eeEEEEECCCCCCHHHHHHHHHhCcCccccCCccceEE-EEEEEECCEEEEEEEEECCCchhhhHHH--HHhhccCCEEE
Confidence 47999999999999999999999988777777777654 3446666444556789999987766665 45788999999
Q ss_pred EEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHHHH
Q 010673 364 FVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVF 442 (504)
Q Consensus 364 lV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~el~ 442 (504)
+|||++++.++..+..|+..+..... ..++|+++|+||+|+.......+...++++.++++ ++++||++ .|+++++
T Consensus 80 ~v~d~~~~~~~~~~~~~~~~i~~~~~--~~~~p~iiv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~l~ 156 (166)
T 2ce2_X 80 CVFAINNTKSFEDIHQYREQIKRVKD--SDDVPMVLVGNKSDLAARTVESRQAQDLARSYGIP-YIETSAKTRQGVEDAF 156 (166)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHHHT--CSCCCEEEEEECTTCSCCCSCHHHHHHHHHHHTCC-EEEECTTTCTTHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEchhhhhcccCHHHHHHHHHHcCCe-EEEecCCCCCCHHHHH
Confidence 99999999999999999998876532 24799999999999987555556888999999986 99999999 9999999
Q ss_pred HHHHHHHh
Q 010673 443 SRIIWAAE 450 (504)
Q Consensus 443 ~~l~~~~~ 450 (504)
++|.+.+.
T Consensus 157 ~~l~~~~~ 164 (166)
T 2ce2_X 157 YTLVREIR 164 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998774
No 63
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=99.90 E-value=4.3e-24 Score=193.93 Aligned_cols=164 Identities=21% Similarity=0.368 Sum_probs=122.2
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|++|||||||+++|++..+...+.+|++..+.. .+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKssl~~~~~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 82 (182)
T 3bwd_D 6 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGATVNLGLWDTAGQEDYNRLR--PLSYRGADV 82 (182)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHSCCC----------CBC-CCC-------CEEECCCC-CTTTTTG--GGGGTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCeeeeeEEE-EEEECCEEEEEEEEECCCChhhhhhH--HhhccCCCE
Confidence 356899999999999999999999998877777787764432 23344333455689999988777665 458899999
Q ss_pred EEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCcc-----------chHHHHHHHHHhCCCCeE
Q 010673 362 TIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM-----------AVQDSARVTQELGIEPPI 429 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~-----------~~~~~~~~~~~~~~~~~~ 429 (504)
+++|||++++.+++.+. .|+..+... ..++|+++|+||+|+..... ..++..++++.++..+++
T Consensus 83 ~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 158 (182)
T 3bwd_D 83 FILAFSLISKASYENVSKKWIPELKHY----APGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYI 158 (182)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----CTTCCEEEEEECHHHHTCHHHHHHC--CCCCCHHHHHHHHHHHTCSEEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEechhhhcCcccccccccCCCCCHHHHHHHHHHcCCCEEE
Confidence 99999999999999987 798888876 45899999999999976544 234778899999974599
Q ss_pred EEeccc-cCHHHHHHHHHHHHhCC
Q 010673 430 PVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 430 ~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++||++ .|++++|+.|.+.+..|
T Consensus 159 ~~Sa~~~~gi~~l~~~l~~~i~~~ 182 (182)
T 3bwd_D 159 ECSSKSQENVKGVFDAAIRVVLQP 182 (182)
T ss_dssp ECCTTTCTTHHHHHHHHHHHHSCC
T ss_pred EEECCCCCCHHHHHHHHHHHHhcC
Confidence 999999 99999999999987654
No 64
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=99.90 E-value=4.2e-23 Score=187.98 Aligned_cols=164 Identities=21% Similarity=0.334 Sum_probs=135.1
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
..++|+++|.+|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|.+.+..+. ..+++.+|++
T Consensus 4 ~~~~i~~~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~ 80 (186)
T 1mh1_A 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGQEDYDRLR--PLSYPQTDVS 80 (186)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHSSCCSSCCCCSCCEEE-EEEEETTEEEEEEEECCCCSGGGTTTG--GGGCTTCSEE
T ss_pred cEEEEEEECCCCCCHHHHHHHHHcCCCCCCcCCcccceeE-EEEEECCEEEEEEEEECCCCHhHHHHH--HHhccCCcEE
Confidence 5689999999999999999999999888878888877554 345666444556689999998777665 4588999999
Q ss_pred EEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCc------------c-chHHHHHHHHHhCCCCe
Q 010673 363 IFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYT------------M-AVQDSARVTQELGIEPP 428 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~------------~-~~~~~~~~~~~~~~~~~ 428 (504)
++|||++++.++..+. .|+..+... ..+.|+++|+||+|+.... . ..++...+++.++..++
T Consensus 81 i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 156 (186)
T 1mh1_A 81 LICFSLVSPASFENVRAKWYPEVRHH----CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKY 156 (186)
T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHH----STTSCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEE
T ss_pred EEEEECCChhhHHHHHHHHHHHHHHh----CCCCCEEEEeEcccccccchhhhhhcccccccCCHHHHHHHHHhcCCcEE
Confidence 9999999999999987 788888776 4489999999999997642 2 23467788999987459
Q ss_pred EEEeccc-cCHHHHHHHHHHHHhCCC
Q 010673 429 IPVSMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 429 ~~vSak~-~gi~el~~~l~~~~~~~~ 453 (504)
+++||++ .|++++|+.|.+.+..+.
T Consensus 157 ~~~Sa~~g~gi~~l~~~l~~~~~~~~ 182 (186)
T 1mh1_A 157 LECSALTQRGLKTVFDEAIRAVLCPP 182 (186)
T ss_dssp EECCTTTCTTHHHHHHHHHHHHSCCC
T ss_pred EEecCCCccCHHHHHHHHHHHHhccc
Confidence 9999999 999999999999986654
No 65
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=99.90 E-value=4.2e-23 Score=187.09 Aligned_cols=168 Identities=18% Similarity=0.347 Sum_probs=125.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCC-CcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPG-GNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~-~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
.+..++|+|+|++|||||||+++|++..+...+.+|++.++....+.+++ ....+.+||++|.+.+...+ ..+++.+
T Consensus 5 ~~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~ 82 (182)
T 1ky3_A 5 KKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLG--VAFYRGA 82 (182)
T ss_dssp --CEEEEEEECCTTSSHHHHHHHHHHSCCCTTC---CCCSCEEEEECCSSSCCEEEEEECCC------------CCSTTC
T ss_pred cCceEEEEEECCCCCCHHHHHHHHHhCcCCcccCCccceEEEEEEEEEcCCcEEEEEEEECCCChHhhhhh--HHHhhcC
Confidence 35679999999999999999999999998888888887777777787763 34567789999987777665 5688999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhcc-CCCCCCcEEEEEECCCCCCCc-c-chHHHHHHHHHhCCCCeEEEeccc-
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGE-DSGYGVPCLLIASKDDLKPYT-M-AVQDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~-~~~~~~piilV~NK~Dl~~~~-~-~~~~~~~~~~~~~~~~~~~vSak~- 435 (504)
|++|+|||++++.+++.+..|+..+..... ....++|+++|+||+|+.... . ..++..++++..+..+++++||++
T Consensus 83 d~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~~~~~~Sa~~~ 162 (182)
T 1ky3_A 83 DCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNA 162 (182)
T ss_dssp CEEEEEEETTCHHHHHTHHHHHHHHHHHHCCSCTTTCCEEEEEECTTSCGGGCCSCHHHHHHHHHHTTSCCEEEEBTTTT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHHHhcccCcCCCcEEEEEECCccccccccCCHHHHHHHHHhcCCCeEEEEecCCC
Confidence 999999999999999999999988876531 112588999999999996433 2 244778888854444599999999
Q ss_pred cCHHHHHHHHHHHHh
Q 010673 436 KDLNNVFSRIIWAAE 450 (504)
Q Consensus 436 ~gi~el~~~l~~~~~ 450 (504)
.|++++|++|.+.+.
T Consensus 163 ~gi~~l~~~l~~~~~ 177 (182)
T 1ky3_A 163 INVDTAFEEIARSAL 177 (182)
T ss_dssp BSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998774
No 66
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=99.90 E-value=4.3e-23 Score=187.92 Aligned_cols=163 Identities=23% Similarity=0.365 Sum_probs=135.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|++..+...+.+|++..+.. .+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 16 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 92 (187)
T 2a9k_A 16 LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRK-KVVLDGEEVQIDILDTAGQEDYAAIR--DNYFRSGEG 92 (187)
T ss_dssp -CEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCTTCCEEEEE-EEEETTEEEEEEEEECCCTTCCHHHH--HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHhhCCCCCcCCCccceEEEE-EEEECCEEEEEEEEECCCCcccHHHH--HHHhccCCE
Confidence 457999999999999999999999999888887888775543 45666344567789999987777665 457889999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.++..+..|+..+..... ..++|+++|+||+|+...+.. .++..++++.++++ ++++||++ .|++
T Consensus 93 ~i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~ 169 (187)
T 2a9k_A 93 FLCVFSITEMESFAATADFREQILRVKE--DENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVN-YVETSAKTRANVD 169 (187)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHC--CTTCCEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEECCTTTCTTHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEECccccccCccCHHHHHHHHHHcCCe-EEEeCCCCCCCHH
Confidence 9999999999999999999998877632 347999999999999765544 34788899999986 99999999 9999
Q ss_pred HHHHHHHHHHh
Q 010673 440 NVFSRIIWAAE 450 (504)
Q Consensus 440 el~~~l~~~~~ 450 (504)
++|++|.+.+.
T Consensus 170 ~l~~~l~~~i~ 180 (187)
T 2a9k_A 170 KVFFDLMREIR 180 (187)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998874
No 67
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=99.90 E-value=5.5e-23 Score=190.43 Aligned_cols=164 Identities=19% Similarity=0.287 Sum_probs=135.5
Q ss_pred ccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 280 TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 280 ~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
+....+||+|+|.+|||||||+++|++..+...+.+|++..+... +.+++....+.+||++|.+.+..++ ..+++.+
T Consensus 21 m~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~ 97 (201)
T 2gco_A 21 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIAD-IEVDGKQVELALWDTAGQEDYDRLR--PLSYPDT 97 (201)
T ss_dssp -CCEEEEEEEEESTTSSHHHHHHHHHHSSCCSSCCCSSCCCCEEE-EEETTEEEEEEEECCCCSGGGTTTG--GGGCTTC
T ss_pred CcccceEEEEECCCCCCHHHHHHHHHhCcCCcccCCcccceEEEE-EEECCEEEEEEEEECCCchhHHHHH--HHhcCCC
Confidence 345678999999999999999999999998888888887766543 6666444567789999988777666 4588999
Q ss_pred cEEEEEEeCCCcccHHHH-HHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc------------cc-hHHHHHHHHHhCC
Q 010673 360 DVTIFVYDSSDEYSWKRT-KELLVEVARLGEDSGYGVPCLLIASKDDLKPYT------------MA-VQDSARVTQELGI 425 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~-~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~------------~~-~~~~~~~~~~~~~ 425 (504)
|++++|||++++.++..+ ..|+..+... .+++|+++|+||+|+.... .. .++..++++.++.
T Consensus 98 d~~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 173 (201)
T 2gco_A 98 DVILMCFSIDSPDSLENIPEKWTPEVKHF----CPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISA 173 (201)
T ss_dssp SEEEEEEETTCHHHHHHHHHTHHHHHHHH----STTCCEEEEEECGGGTTCHHHHHHHHTTTCCCCCHHHHHHHHHHTTC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEecHHhhcCccchhhhcccccCcCCHHHHHHHHHhCCC
Confidence 999999999999999998 6788888765 4589999999999997652 22 3477888999988
Q ss_pred CCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 426 EPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 426 ~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
.+++++||++ .|++++|+.|.+.+.
T Consensus 174 ~~~~~~SA~~g~gi~~l~~~i~~~~l 199 (201)
T 2gco_A 174 FGYLECSAKTKEGVREVFEMATRAGL 199 (201)
T ss_dssp SEEEECCTTTCTTHHHHHHHHHHHHH
T ss_pred cEEEEeeCCCCCCHHHHHHHHHHHHh
Confidence 5599999999 999999999998764
No 68
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=99.90 E-value=3.6e-23 Score=193.77 Aligned_cols=164 Identities=19% Similarity=0.298 Sum_probs=118.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|++..+...+.+|+...+. ..+.+++....+.+||++|.+.+..++ ..++..+|+
T Consensus 32 ~~~~ki~vvG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d~ 108 (214)
T 2j1l_A 32 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQDDYDRLR--PLFYPDASV 108 (214)
T ss_dssp CCEEEEEEEECTTSSHHHHHHHHHC-------CCCCCEEEE-EEEEETTEEEEEEEEEC-----------------CEEE
T ss_pred cceEEEEEECcCCCCHHHHHHHHHcCCCCCCCCCccceeEE-EEEEECCEEEEEEEEECCCchhhhHHH--HHHhccCCE
Confidence 45799999999999999999999999888777788876553 346666444567789999988777665 457899999
Q ss_pred EEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCc------------c-chHHHHHHHHHhCCCC
Q 010673 362 TIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYT------------M-AVQDSARVTQELGIEP 427 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~------------~-~~~~~~~~~~~~~~~~ 427 (504)
+++|||++++.+|+.+. .|+..+... ..++|+++|+||+|+.... . ..++..++++.++..+
T Consensus 109 ~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 184 (214)
T 2j1l_A 109 LLLCFDVTSPNSFDNIFNRWYPEVNHF----CKKVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVA 184 (214)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----CSSCCEEEEEECGGGGSCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEEChhhhccchhhhhhcccccCcccHHHHHHHHHhcCCCE
Confidence 99999999999999986 798888776 4589999999999997653 1 2346788999999855
Q ss_pred eEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 428 PIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 428 ~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++++||++ .||+++|+.|.+.+...
T Consensus 185 ~~~~SA~~g~gi~el~~~l~~~~~~~ 210 (214)
T 2j1l_A 185 YLECSARLHDNVHAVFQEAAEVALSS 210 (214)
T ss_dssp EEECBTTTTBSHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999 99999999999987644
No 69
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.90 E-value=4.1e-23 Score=190.40 Aligned_cols=162 Identities=20% Similarity=0.275 Sum_probs=133.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|++..+...+.+|++..+. ..+.+++....+.+||++|.+. ..++ ..+++.+|+
T Consensus 26 ~~~~ki~v~G~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~-~~~~--~~~~~~~d~ 101 (196)
T 2atv_A 26 SAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYR-HQATIDDEVVSMEILDTAGQED-TIQR--EGHMRWGEG 101 (196)
T ss_dssp -CCEEEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCCCCC-CHHH--HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCcccCCCCCceEE-EEEEECCEEEEEEEEECCCCCc-ccch--hhhhccCCE
Confidence 45689999999999999999999999988888888877553 3466664445677899999866 3343 567889999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-c-CH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-K-DL 438 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~-gi 438 (504)
+++|||++++.+++.+..|+..+..... ..++|+++|+||+|+...+.. .++..++++.++++ ++++||++ . |+
T Consensus 102 iilv~D~~~~~s~~~~~~~~~~i~~~~~--~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~g~~gi 178 (196)
T 2atv_A 102 FVLVYDITDRGSFEEVLPLKNILDEIKK--PKNVTLILVGNKADLDHSRQVSTEEGEKLATELACA-FYECSACTGEGNI 178 (196)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHHT--TSCCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTSE-EEECCTTTCTTCH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhhC--CCCCcEEEEEECcccccccccCHHHHHHHHHHhCCe-EEEECCCcCCcCH
Confidence 9999999999999999999988876532 358999999999999775544 34788899999886 99999999 9 99
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 179 ~~l~~~l~~~i~ 190 (196)
T 2atv_A 179 TEIFYELCREVR 190 (196)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998774
No 70
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=99.90 E-value=4.2e-23 Score=191.80 Aligned_cols=161 Identities=20% Similarity=0.311 Sum_probs=132.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
.+.+||+|+|.+|||||||+++|+++.+...+.+|++..+ ...+.+++....+.+||++|.+.+..+. ..+++.+|+
T Consensus 28 ~~~~ki~vvG~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 104 (204)
T 4gzl_A 28 GQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGLEDYDRLR--PLSYPQTDV 104 (204)
T ss_dssp --CEEEEEEESTTSSHHHHHHHHHHSCCCC-CCCCSEEEE-EEEEECC-CEEEEEEEEECCSGGGTTTG--GGGCTTCSE
T ss_pred CCeEEEEEECcCCCCHHHHHHHHHhCCCCCCcCCeeccee-EEEEEECCEEEEEEEEECCCchhhHHHH--HHHhccCCE
Confidence 5579999999999999999999999998888888887644 4456777555566789999998877766 458899999
Q ss_pred EEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCcc-------------chHHHHHHHHHhCCCC
Q 010673 362 TIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYTM-------------AVQDSARVTQELGIEP 427 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~-------------~~~~~~~~~~~~~~~~ 427 (504)
+++|||++++.+++.+. .|+..+... ..++|+++|+||+|+..... ..++...+++.++..+
T Consensus 105 ~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 180 (204)
T 4gzl_A 105 FLICFSLVSPASFENVRAKWYPEVRHH----CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK 180 (204)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----CSSCCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEechhhccchhhhhhhhccccccccHHHHHHHHHhcCCcE
Confidence 99999999999999986 788888876 45899999999999976542 2347778999999877
Q ss_pred eEEEeccc-cCHHHHHHHHHHHH
Q 010673 428 PIPVSMKS-KDLNNVFSRIIWAA 449 (504)
Q Consensus 428 ~~~vSak~-~gi~el~~~l~~~~ 449 (504)
++++||++ .|++++|++|.+.+
T Consensus 181 ~~~~SA~~g~gi~~l~~~l~~~~ 203 (204)
T 4gzl_A 181 YLECSALTQRGLKTVFDEAIRAV 203 (204)
T ss_dssp EEECCTTTCTTHHHHHHHHHHTT
T ss_pred EEEeeCCCCCCHHHHHHHHHHHh
Confidence 99999999 99999999998754
No 71
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.90 E-value=7.2e-23 Score=190.56 Aligned_cols=166 Identities=20% Similarity=0.305 Sum_probs=130.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|++..+...+.+|++..+... +.+++....+.+||++|.+.+..+. ..+++.+|+
T Consensus 23 ~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 99 (207)
T 2fv8_A 23 MIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQEDYDRLR--PLSYPDTDV 99 (207)
T ss_dssp SEEEEEEEEECTTSSHHHHHHHHHHSSCC-------CCEEEEE-EEETTEEEEEEEEECTTCTTCTTTG--GGGCTTCCE
T ss_pred ccCcEEEEECcCCCCHHHHHHHHhcCCCCCcCCCcccceEEEE-EEECCEEEEEEEEECCCcHHHHHHH--HhhcCCCCE
Confidence 3468999999999999999999999998888878888766543 6666444567789999987776665 458899999
Q ss_pred EEEEEeCCCcccHHHH-HHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc------------cc-hHHHHHHHHHhCCCC
Q 010673 362 TIFVYDSSDEYSWKRT-KELLVEVARLGEDSGYGVPCLLIASKDDLKPYT------------MA-VQDSARVTQELGIEP 427 (504)
Q Consensus 362 iilV~D~s~~~s~~~~-~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~------------~~-~~~~~~~~~~~~~~~ 427 (504)
+++|||++++.++..+ ..|+..+... .+++|+++|+||+|+.... .+ .++..+++..++..+
T Consensus 100 ~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 175 (207)
T 2fv8_A 100 ILMCFSVDSPDSLENIPEKWVPEVKHF----CPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYD 175 (207)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHH----STTCCEEEEEECGGGGGCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHh----CCCCCEEEEEEchhhhccccchhhhhhcccCCCCHHHHHHHHHhcCCCE
Confidence 9999999999999988 6788888765 4589999999999997642 22 336778888888855
Q ss_pred eEEEeccc-cCHHHHHHHHHHHHhCCCC
Q 010673 428 PIPVSMKS-KDLNNVFSRIIWAAEHPHL 454 (504)
Q Consensus 428 ~~~vSak~-~gi~el~~~l~~~~~~~~~ 454 (504)
++++||++ .|++++|++|.+.+..+..
T Consensus 176 ~~~~SA~~g~gi~el~~~l~~~i~~~~~ 203 (207)
T 2fv8_A 176 YLECSAKTKEGVREVFETATRAALQKRY 203 (207)
T ss_dssp EEECCTTTCTTHHHHHHHHHHHHHSCCC
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999999 9999999999999876643
No 72
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=99.90 E-value=3.7e-23 Score=185.54 Aligned_cols=165 Identities=18% Similarity=0.316 Sum_probs=132.4
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
+.+||+|+|.+|||||||+++|++..+...+.+|.+..+. ..+..++....+.+||++|.+.+..+. ..++..+|++
T Consensus 2 ~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~~~~ 78 (172)
T 2erx_A 2 NDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCDKSICTLQITDTTGSHQFPAMQ--RLSISKGHAF 78 (172)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHTCCCCSSCCCCSCEEEE-EEEEETTEEEEEEEEECCSCSSCHHHH--HHHHHHCSEE
T ss_pred CceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCCccccEE-EEEEECCEEEEEEEEECCCchhhHHHH--HHhcccCCEE
Confidence 4689999999999999999999999887777777776543 335555344567789999987776665 4578899999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
++|||++++.+++.+..|+..+.+... ...++|+++|+||+|+...+... .....++..++++ ++++||++ .|+++
T Consensus 79 i~v~d~~~~~~~~~~~~~~~~i~~~~~-~~~~~pii~v~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~ 156 (172)
T 2erx_A 79 ILVYSITSRQSLEELKPIYEQICEIKG-DVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCA-FMETSAKLNHNVKE 156 (172)
T ss_dssp EEEEETTCHHHHHTTHHHHHHHHHHHC----CCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTCE-EEECBTTTTBSHHH
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEEccccccccccCHHHHHHHHHHhCCe-EEEecCCCCcCHHH
Confidence 999999999999988888888776421 12479999999999997655544 3778888989886 99999999 99999
Q ss_pred HHHHHHHHHhCC
Q 010673 441 VFSRIIWAAEHP 452 (504)
Q Consensus 441 l~~~l~~~~~~~ 452 (504)
++++|.+.+..+
T Consensus 157 l~~~l~~~~~~~ 168 (172)
T 2erx_A 157 LFQELLNLEKRR 168 (172)
T ss_dssp HHHHHHHTCCSS
T ss_pred HHHHHHHHHhhh
Confidence 999999876543
No 73
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=99.90 E-value=1.9e-22 Score=184.67 Aligned_cols=163 Identities=20% Similarity=0.332 Sum_probs=128.2
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
..++|+|+|.+|||||||+++|++..+...+.+|++..+. ..+.+.+....+.+||++|.+.+..++ ..++..+|++
T Consensus 20 ~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~~ 96 (190)
T 3con_A 20 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMR--DQYMRTGEGF 96 (190)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHSSCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCC-------------CTTCSEE
T ss_pred ceeEEEEECcCCCCHHHHHHHHHcCCCccccCCccceEEE-EEEEECCEEEEEEEEECCChHHHHHHH--HHhhCcCCEE
Confidence 4689999999999999999999999887777777776543 446666444567789999987776665 4588999999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHHH
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNV 441 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~el 441 (504)
++|||++++.++..+..|+..+..... ..++|+++|+||+|+.......++.+++++.++++ ++++||++ .|++++
T Consensus 97 i~v~d~~~~~s~~~~~~~~~~i~~~~~--~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~l 173 (190)
T 3con_A 97 LCVFAINNSKSFADINLYREQIKRVKD--SDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIP-FIETSAKTRQGVEDA 173 (190)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHT--CSCCCEEEEEECTTCSCCCSCHHHHHHHHHHHTCC-EEECCTTTCTTHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHHhC--CCCCeEEEEEECCcCCcccCCHHHHHHHHHHcCCe-EEEEeCCCCCCHHHH
Confidence 999999999999999999988876532 24799999999999987544556888999999986 99999999 999999
Q ss_pred HHHHHHHHhC
Q 010673 442 FSRIIWAAEH 451 (504)
Q Consensus 442 ~~~l~~~~~~ 451 (504)
+++|.+.+..
T Consensus 174 ~~~l~~~~~~ 183 (190)
T 3con_A 174 FYTLVREIRQ 183 (190)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988753
No 74
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.89 E-value=9.6e-23 Score=187.89 Aligned_cols=168 Identities=17% Similarity=0.308 Sum_probs=136.1
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...++|+|+|.+|||||||+++|++..+...+.+|.+..+. ..+..++....+.+||++|.+.+..++ ..++..+|+
T Consensus 6 ~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 82 (199)
T 2gf0_A 6 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCDKSVCTLQITDTTGSHQFPAMQ--RLSISKGHA 82 (199)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHSCCCCTTSCCCCEEEE-EEEEETTEEEEEEEEECCGGGSCHHHH--HHHHHHCSE
T ss_pred CCeeEEEEECCCCCcHHHHHHHHHcCCCCCcccCcccccee-EEEEECCEEEEEEEEeCCChHHhHHHH--HHhhccCCE
Confidence 45689999999999999999999999888777777776544 335555344567789999987776665 457889999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNN 440 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~e 440 (504)
+++|||++++.+++.+..|+..+...... ..++|+++|+||+|+.......+....++..++++ ++++||++ .|+++
T Consensus 83 ~i~v~d~~~~~s~~~~~~~~~~i~~~~~~-~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~~~gi~~ 160 (199)
T 2gf0_A 83 FILVFSVTSKQSLEELGPIYKLIVQIKGS-VEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCA-FMETSAKMNYNVKE 160 (199)
T ss_dssp EEEEEETTCHHHHHTTHHHHHHHHHHHSC-GGGSCEEEEEECTTCSSCSSCHHHHHHHHHHHTCE-EEECBTTTTBSHHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEECccCCccccCHHHHHHHHHHhCCe-EEEEecCCCCCHHH
Confidence 99999999999999888888777654210 23789999999999987544456788899999986 99999999 99999
Q ss_pred HHHHHHHHHhCCCC
Q 010673 441 VFSRIIWAAEHPHL 454 (504)
Q Consensus 441 l~~~l~~~~~~~~~ 454 (504)
++++|.+.+.....
T Consensus 161 l~~~l~~~~~~~~~ 174 (199)
T 2gf0_A 161 LFQELLTLETRRNM 174 (199)
T ss_dssp HHHHHHHHCSSSCE
T ss_pred HHHHHHHHHhhhhc
Confidence 99999998866544
No 75
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=99.89 E-value=1.1e-22 Score=187.08 Aligned_cols=163 Identities=20% Similarity=0.313 Sum_probs=123.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCC--CCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhh-Hhhhhhhhhhccc
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG-VKKILSNKEALAS 358 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~--~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~-~~~~~~~~~~~~~ 358 (504)
...+||+++|++|||||||+|+|++... ...+ ++++.++..+.+.+++....+.+||+.|.+. ...+. ..+++.
T Consensus 4 ~~~~kv~lvG~~~vGKSsL~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Dt~~~~~~~~~~~--~~~~~~ 80 (192)
T 2cjw_A 4 MTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDX-EVLGEDTYERTLMVDGESATIILLDMWENKGENEWLH--DHCMQV 80 (192)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHHSCCC-----GGGCTTEEEEEEEETTEEEEEEEECCCCC----CTTG--GGHHHH
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCcCCcCccc-cccceeEEEEEEEECCeEEEEEEEEeccCcchhhhHH--Hhhccc
Confidence 3468999999999999999999996433 3333 3455555566677774444556788887655 23333 457788
Q ss_pred ccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-c
Q 010673 359 CDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-K 436 (504)
Q Consensus 359 ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~ 436 (504)
+|++++|||++++.||+.+..|+..+..... ..++|+++|+||+|+...+... .+...++..++++ +++|||++ .
T Consensus 81 ~~~~i~v~dv~~~~s~~~~~~~~~~l~~~~~--~~~~piilV~NK~Dl~~~r~v~~~~~~~~a~~~~~~-~~e~SA~~g~ 157 (192)
T 2cjw_A 81 GDAYLIVYSITDRASFEKASELRIQLRRARQ--TEDIPIILVGNKSDLVRXREVSVSEGRAXAVVFDXK-FIETSAAVQH 157 (192)
T ss_dssp CSEEEEEEETTCHHHHHHHHHHHHHHHHHTT--TSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCE-EEECBTTTTB
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHhhC--CCCCeEEEEEechhhhccccccHHHHHHHHHHhCCc-eEEeccccCC
Confidence 9999999999999999999999888765421 3479999999999997654443 3667788888876 99999999 9
Q ss_pred CHHHHHHHHHHHHh
Q 010673 437 DLNNVFSRIIWAAE 450 (504)
Q Consensus 437 gi~el~~~l~~~~~ 450 (504)
||+++|+.|++.+.
T Consensus 158 ~v~~lf~~l~~~~~ 171 (192)
T 2cjw_A 158 NVKELFEGIVRQVR 171 (192)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999874
No 76
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=99.89 E-value=5.8e-23 Score=192.57 Aligned_cols=168 Identities=17% Similarity=0.196 Sum_probs=134.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCc-EEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGN-KKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~-~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
....+||+|+|.+|||||||+|+|++..+...+.+|.+.......+...++. ..+.+||++|.+.+..++ ..++..+
T Consensus 8 ~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~ 85 (218)
T 4djt_A 8 RELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLK--DVYYIGA 85 (218)
T ss_dssp --CEEEEEEECCTTSSHHHHHCBCTTCSTTCEEETTTTEEEEEEEEEBTTSCEEEEEEEEECSGGGTSCCC--HHHHTTC
T ss_pred ccCccEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceeeEEEEEEeCCCcEEEEEEEecCCchhhchHH--HHHhhcC
Confidence 3467999999999999999999999988887777787766665555555344 567789999987776555 4578899
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH-HHHHHHHHhCCCCeEEEeccc-cC
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ-DSARVTQELGIEPPIPVSMKS-KD 437 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~-~~~~~~~~~~~~~~~~vSak~-~g 437 (504)
|++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+.... ....++...+++ ++++||++ .|
T Consensus 86 d~~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~Sa~~g~g 161 (218)
T 4djt_A 86 SGAILFFDVTSRITCQNLARWVKEFQAVV---GNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYE-YFEISAKTAHN 161 (218)
T ss_dssp SEEEEEEETTCHHHHHTHHHHHHHHHHHH---CSSSCEEEEEECTTCC----CCHHHHHHHTTTCCCE-EEEEBTTTTBT
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHhc---CCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCc-EEEEecCCCCC
Confidence 99999999999999999999999887663 33689999999999987654443 677888888886 99999999 99
Q ss_pred HHHHHHHHHHHHhCCCC
Q 010673 438 LNNVFSRIIWAAEHPHL 454 (504)
Q Consensus 438 i~el~~~l~~~~~~~~~ 454 (504)
++++|++|.+.+.....
T Consensus 162 v~~l~~~l~~~~~~~~~ 178 (218)
T 4djt_A 162 FGLPFLHLARIFTGRPD 178 (218)
T ss_dssp TTHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999999866543
No 77
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=99.89 E-value=2.7e-23 Score=195.45 Aligned_cols=164 Identities=17% Similarity=0.254 Sum_probs=138.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|+.+.+...+.+|.+.++....+.+.++...+.+||++|.+.+..++ ..+++.+|
T Consensus 12 ~~~~~ki~v~G~~~~GKSsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~ 89 (221)
T 3gj0_A 12 PQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLR--DGYYIQAQ 89 (221)
T ss_dssp CCCEEEEEEEECTTSSHHHHHTTBHHHHHTCEEETTTTEEEEEEEEEETTEEEEEEEEEECSGGGTSCCC--HHHHTTCC
T ss_pred cccceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEeCCChHHHhHHH--HHHHhcCC
Confidence 4567999999999999999999988777777777888877777777777555677789999987776665 55889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
++++|||++++.++..+..|+..+... ..++|+++|+||+|+....... ....+++.++++ ++++||++ .|++
T Consensus 90 ~~i~v~d~~~~~s~~~~~~~~~~~~~~----~~~~p~ilv~nK~Dl~~~~~~~-~~~~~~~~~~~~-~~~~Sa~~~~gi~ 163 (221)
T 3gj0_A 90 CAIIMFDVTSRVTYKNVPNWHRDLVRV----CENIPIVLCGNKVDIKDRKVKA-KSIVFHRKKNLQ-YYDISAKSNYNFE 163 (221)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHH----STTCCEEEEEECTTSSSCSSCG-GGCCHHHHHTCE-EEECBGGGTBTTT
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHh----CCCCCEEEEEECCccccccccH-HHHHHHHHcCCE-EEEEeCCCCCCHH
Confidence 999999999999999999999999887 4589999999999997654432 566778888886 99999999 9999
Q ss_pred HHHHHHHHHHhCC
Q 010673 440 NVFSRIIWAAEHP 452 (504)
Q Consensus 440 el~~~l~~~~~~~ 452 (504)
++|++|.+.+...
T Consensus 164 ~l~~~l~~~l~~~ 176 (221)
T 3gj0_A 164 KPFLWLARKLIGD 176 (221)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999987543
No 78
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=99.89 E-value=7.4e-23 Score=189.89 Aligned_cols=166 Identities=22% Similarity=0.266 Sum_probs=102.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcC--CCCCCCCCCccceEEEEEEEcCCC--cEEEEEEecCChhhHhhhhhhhhhcc
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLER--PFSENYAPTTGEQYAVNVVDQPGG--NKKTLILQEIPEEGVKKILSNKEALA 357 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~--~~~~~~~~T~~~~~~~~~v~~~~~--~~~~li~d~~g~~~~~~~~~~~~~~~ 357 (504)
...++|+|+|.+|||||||+++|++. .+...+.+|++.++....+.+++. ...+.+||++|.+.+..++ ..+++
T Consensus 18 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~ 95 (208)
T 2yc2_C 18 TLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTAGSDLYKEQI--SQYWN 95 (208)
T ss_dssp EEEEEEEEC----------------------------------CEEEECTTSSEEEEEEEEETTTTHHHHHHH--STTCC
T ss_pred ccceEEEEECCCCCCHHHHHHHHHhCCCcccCCCCCccceEEEEEEEEECCcccEEEEEEEECCCcHHHHHHH--HHHHh
Confidence 46789999999999999999999998 777677788886677777888843 5677889999998877776 56889
Q ss_pred cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCC-Cccc-hHHHHHHHHHhCCCCeEEEeccc
Q 010673 358 SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKP-YTMA-VQDSARVTQELGIEPPIPVSMKS 435 (504)
Q Consensus 358 ~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~-~~~~-~~~~~~~~~~~~~~~~~~vSak~ 435 (504)
.+|++|+|||++++.+++.+..|+..+.........++|+++|+||+|+.. .+.. .++..++++.++++ ++++||++
T Consensus 96 ~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~-~~~~Sa~~ 174 (208)
T 2yc2_C 96 GVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLD-FFDVSANP 174 (208)
T ss_dssp CCCEEEEEEETTCHHHHHHHHHHHHHHHHHCSCTTSCCEEEEEEECC-------CCCHHHHHHHHHHTTCE-EEECCC--
T ss_pred hCcEEEEEEECCCHHHHHHHHHHHHHHHHhhcccccCCcEEEEEECcccchhhccCCHHHHHHHHHHcCCE-EEEeccCC
Confidence 999999999999999999999999999876311014899999999999987 5544 45888999999986 99999998
Q ss_pred --cCHHHHHHHHHHHHh
Q 010673 436 --KDLNNVFSRIIWAAE 450 (504)
Q Consensus 436 --~gi~el~~~l~~~~~ 450 (504)
.|++++|++|.+.+.
T Consensus 175 ~~~gi~~l~~~i~~~~~ 191 (208)
T 2yc2_C 175 PGKDADAPFLSIATTFY 191 (208)
T ss_dssp -----CHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHH
Confidence 899999999998774
No 79
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=99.89 E-value=4.4e-24 Score=215.15 Aligned_cols=297 Identities=16% Similarity=0.092 Sum_probs=177.2
Q ss_pred HHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCcccc-ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhh
Q 010673 126 ALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVEL-ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDL 202 (504)
Q Consensus 126 ~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l-~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l 202 (504)
+.|+++|+.+++.. ..+-+..|.+++| | .+.++++..... .... ...++++|..++....|++++ ++++|
T Consensus 40 ~~~~g~gk~~e~~~-----~~~~~~v~~~~~l~p-~q~~~l~~~~~~~~v~dr~~lil~i~~~ra~t~~~~~q~-~la~l 112 (364)
T 2qtf_A 40 KFYIQYDKLQQIKN-----DEEISTLIIFEQLKP-RHFINIRRELKGKEVLDKILLLLEIFALHAGSKEAKMQI-ELARL 112 (364)
T ss_dssp TTBSCHHHHHHHHT-----CTTCCEEEESSCCCH-HHHHHHHHHHTTCEEECHHHHHHHHHHHHCCSHHHHHHH-HHHHH
T ss_pred cceechhHHHHHhh-----ccCCCEEEECCCCCH-HHHHHHHHHhCCCceeehHhHHHHHHHhhCcccchhHHH-HHHHH
Confidence 35677888888877 3445789999999 9 887776653332 2222 388999999999999999999 99999
Q ss_pred hccCCCCC-CCCCccccccccccCCcccHHHHHHhhhhhhccCHH--HHHHHHHHhcCCCChHHHHHHhhhhhhhhhhhc
Q 010673 203 FLTAPESP-WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPR--HSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQ 279 (504)
Q Consensus 203 ~~~~p~~p-~~~~~~~~~~~~~~~g~i~~~~~l~~w~~~~~~~~~--~~~~~l~~lg~~~~~~~~l~~~~~~~~~~~~~~ 279 (504)
-+..|++. |.... ...|++...|. +++.++.. ....++..+ ...+...+..+...+. .
T Consensus 113 ~~~~~rl~~~~~l~-------~~~~~i~~~g~-----ge~~~e~~~~~~~~~i~~l------~~~l~~~~~~r~~~r~-~ 173 (364)
T 2qtf_A 113 KYELPIIKETYTKS-------KIGEQQGPLGA-----GTYGVESTIKFYKRRINKL------MKELESIKIFKEKSIE-S 173 (364)
T ss_dssp HHHHHHHHHC---------------------------------CHHHHHHHHHHHH------HHHHHHHHC---------
T ss_pred hhhchhhhhhhHHH-------HhcCCCCcCCc-----CHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-h
Confidence 99888754 75432 12344443332 23322222 122333332 2333333333222222 2
Q ss_pred ccCceEE-EEEEcCCCchhhHHHHHHhcCCCCCCC-CCCccceEEEEEEEcCCCcEEEEEEecCChh------hHhhhhh
Q 010673 280 TERNVFR-CLLFGPQNAGKSALLNSFLERPFSENY-APTTGEQYAVNVVDQPGGNKKTLILQEIPEE------GVKKILS 351 (504)
Q Consensus 280 ~~~~~~k-I~vvG~~~vGKSSLin~l~~~~~~~~~-~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~------~~~~~~~ 351 (504)
..+..++ |+|+|++|||||||+|+|++..+.... ..++.+ .....+.++ | ..+.+||++|.. ..+.+..
T Consensus 174 r~~~~~~~V~lvG~~naGKSTLln~L~~~~~~~~~~~~~T~d-~~~~~i~~~-g-~~v~l~DT~G~i~~lp~~lve~f~~ 250 (364)
T 2qtf_A 174 NKRNNIPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMS-PKRYAIPIN-N-RKIMLVDTVGFIRGIPPQIVDAFFV 250 (364)
T ss_dssp -----CCEEEEECBTTSSHHHHHHHHHCC-----------CC-SCEEEEEET-T-EEEEEEECCCBCSSCCGGGHHHHHH
T ss_pred hhhcCCcEEEEECCCCCCHHHHHHHHHCCCccccCCcccccC-CEEEEEEEC-C-EEEEEEeCCCchhcCCHHHHHHHHH
Confidence 2344444 999999999999999999998763322 223332 334457777 4 556788998851 1122333
Q ss_pred hhhhcccccEEEEEEeCCCcc--cHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc--hHHHHHHHHHh-CC-
Q 010673 352 NKEALASCDVTIFVYDSSDEY--SWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA--VQDSARVTQEL-GI- 425 (504)
Q Consensus 352 ~~~~~~~ad~iilV~D~s~~~--s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~--~~~~~~~~~~~-~~- 425 (504)
+...+..+|++++|+|++++. ++..+..|...+.... ..+.|+++|+||+|+.+.... ...+..++..+ ..
T Consensus 251 tl~~~~~aD~il~VvD~s~~~~~~~~~~~~~~~~L~~l~---~~~~p~ilV~NK~Dl~~~~~~~~~~~~~~l~~~l~~~~ 327 (364)
T 2qtf_A 251 TLSEAKYSDALILVIDSTFSENLLIETLQSSFEILREIG---VSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPI 327 (364)
T ss_dssp HHHGGGGSSEEEEEEETTSCHHHHHHHHHHHHHHHHHHT---CCSCCEEEEEECGGGCCSCHHHHHHHHHHHHHHHCSCE
T ss_pred HHHHHHhCCEEEEEEECCCCcchHHHHHHHHHHHHHHhC---cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHhcCCC
Confidence 456788999999999999986 5555555555554431 247899999999999764421 11344455665 21
Q ss_pred CCeEEEeccc-cCHHHHHHHHHHHHhCCCC
Q 010673 426 EPPIPVSMKS-KDLNNVFSRIIWAAEHPHL 454 (504)
Q Consensus 426 ~~~~~vSak~-~gi~el~~~l~~~~~~~~~ 454 (504)
++++++||++ .|++++++.|.+.+..+..
T Consensus 328 ~~~~~~SA~~g~gi~~L~~~I~~~l~~~~~ 357 (364)
T 2qtf_A 328 FDVIPISALKRTNLELLRDKIYQLATQLSL 357 (364)
T ss_dssp EEEEECBTTTTBSHHHHHHHHHHHHHHHC-
T ss_pred CcEEEEECCCCcCHHHHHHHHHHHhcccCC
Confidence 2479999999 9999999999998765543
No 80
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=99.88 E-value=9.4e-22 Score=176.43 Aligned_cols=162 Identities=18% Similarity=0.178 Sum_probs=124.9
Q ss_pred ccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 280 TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 280 ~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
..+..++|+|+|++|||||||+++|+++.+.. +.||.+. ....+.+. ...+.+||++|.+.+..++ ..+++.+
T Consensus 3 ~~~~~~~i~v~G~~~~GKssl~~~l~~~~~~~-~~~t~~~--~~~~~~~~--~~~~~~~Dt~G~~~~~~~~--~~~~~~~ 75 (171)
T 1upt_A 3 HMTREMRILILGLDGAGKTTILYRLQVGEVVT-TIPTIGF--NVETVTYK--NLKFQVWDLGGLTSIRPYW--RCYYSNT 75 (171)
T ss_dssp CCSSCEEEEEECSTTSSHHHHHHHHHHSSCCC-CCCCSSE--EEEEEEET--TEEEEEEEECCCGGGGGGG--GGGCTTC
T ss_pred CCCCccEEEEECCCCCCHHHHHHHHhcCCCCC-cCCcCcc--ceEEEEEC--CEEEEEEECCCChhhhHHH--HHHhccC
Confidence 34567999999999999999999999988753 4566654 34455555 3678889999998777765 5688999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHH----HHHhCCCCeEEEeccc
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARV----TQELGIEPPIPVSMKS 435 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~----~~~~~~~~~~~vSak~ 435 (504)
|++++|||++++.++..+..|+..+..... ..++|+++|+||+|+.......+....+ +...++ +++++||++
T Consensus 76 d~ii~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Sa~~ 152 (171)
T 1upt_A 76 DAVIYVVDSCDRDRIGISKSELVAMLEEEE--LRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKW-QIFKTSATK 152 (171)
T ss_dssp SEEEEEEETTCCTTHHHHHHHHHHHHTCGG--GTTCEEEEEEECTTSTTCCCHHHHHHHHTGGGCTTSCE-EEEECCTTT
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHhchh--hCCCEEEEEEECCCCcCCCCHHHHHHHhCchhccCCce-EEEECcCCC
Confidence 999999999999999999888888765321 2589999999999998754322222222 122333 389999999
Q ss_pred -cCHHHHHHHHHHHHhC
Q 010673 436 -KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 436 -~gi~el~~~l~~~~~~ 451 (504)
.|+++++++|.+.+..
T Consensus 153 ~~gi~~l~~~l~~~i~~ 169 (171)
T 1upt_A 153 GTGLDEAMEWLVETLKS 169 (171)
T ss_dssp CTTHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHhh
Confidence 9999999999998754
No 81
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=99.88 E-value=2.5e-24 Score=199.16 Aligned_cols=164 Identities=25% Similarity=0.384 Sum_probs=130.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+|+|++..+...+.+|++.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 30 ~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 107 (199)
T 3l0i_B 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT--SSYYRGAH 107 (199)
T ss_dssp CSEEEEEEEECCTTSCCTTTTTSSBCCCCCCHHHHHHCCSEEEEEEEETTEEEEEEEECCTTCTTCCCCS--CC--CCCS
T ss_pred cCcceEEEEECCCCCCHHHHHHHHhcCCCCCCcCCcccceEEEEEEEECCEEEEEEEEECCCcHhHHHHH--HHHhhcCC
Confidence 3567999999999999999999999998887777777777777778887444567789999987776665 45889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH-HHHHHHHHhCCCCeEEEeccc-cCH
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ-DSARVTQELGIEPPIPVSMKS-KDL 438 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~-~~~~~~~~~~~~~~~~vSak~-~gi 438 (504)
++|+|||++++.+++.+..|+..+.... ..++|+++|+||+|+...+.... ..+.++..++++ ++++||++ .|+
T Consensus 108 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~---~~~~p~ilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~vSA~~g~gv 183 (199)
T 3l0i_B 108 GIIVVYDVTDQESFNNVKQWLQEIDRYA---SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNV 183 (199)
T ss_dssp EEEECC-CCCSHHHHHHHHHHHHHHSCC----CCSEEEEC-CCSSCC--CCCCSCC-CHHHHTTTCC-BCCCCC---HHH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhc---cCCCCEEEEEECccCCccccCCHHHHHHHHHHcCCe-EEEEECCCCCCH
Confidence 9999999999999999999999987652 34799999999999987655443 677888999987 99999999 999
Q ss_pred HHHHHHHHHHHh
Q 010673 439 NNVFSRIIWAAE 450 (504)
Q Consensus 439 ~el~~~l~~~~~ 450 (504)
+++|++|.+.+.
T Consensus 184 ~~l~~~l~~~l~ 195 (199)
T 3l0i_B 184 EQSFMTMAAEIK 195 (199)
T ss_dssp HHHHHHHTTTTT
T ss_pred HHHHHHHHHHHH
Confidence 999999987664
No 82
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=99.88 E-value=8.5e-22 Score=181.50 Aligned_cols=166 Identities=18% Similarity=0.204 Sum_probs=125.2
Q ss_pred ccCceEEEEEEcCCCchhhHHHHHHhcCCCCC-CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccc
Q 010673 280 TERNVFRCLLFGPQNAGKSALLNSFLERPFSE-NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALAS 358 (504)
Q Consensus 280 ~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~-~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ 358 (504)
.....+||+|+|.+|||||||+++|++..+.. .+.+|++. ....+.. ....+.+||++|.+.+..++ ..+++.
T Consensus 13 ~~~~~~ki~v~G~~~~GKSsl~~~l~~~~~~~~~~~~t~~~--~~~~~~~--~~~~~~i~Dt~G~~~~~~~~--~~~~~~ 86 (199)
T 4bas_A 13 QSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGY--NVETFEK--GRVAFTVFDMGGAKKFRGLW--ETYYDN 86 (199)
T ss_dssp ---CEEEEEEECCTTSCHHHHHHHHSCCC----CCCCCSSE--EEEEEEE--TTEEEEEEEECCSGGGGGGG--GGGCTT
T ss_pred CCCCCcEEEEECCCCCCHHHHHHHHhcCCCcccccccccce--eEEEEEe--CCEEEEEEECCCCHhHHHHH--HHHHhc
Confidence 35677899999999999999999999999988 67788874 3334443 45778899999998887776 468899
Q ss_pred ccEEEEEEeCCCcccHHHHHHHHHHHHHhccC-----CCCCCcEEEEEECCCCCCCccchHHHHHH-----HHHhCCCCe
Q 010673 359 CDVTIFVYDSSDEYSWKRTKELLVEVARLGED-----SGYGVPCLLIASKDDLKPYTMAVQDSARV-----TQELGIEPP 428 (504)
Q Consensus 359 ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~-----~~~~~piilV~NK~Dl~~~~~~~~~~~~~-----~~~~~~~~~ 428 (504)
+|++|+|||++++.+|..+..|+..+...... ...++|+++|+||+|+.......+..+.+ ++..+++ +
T Consensus 87 ~d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~piilv~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (199)
T 4bas_A 87 IDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFV-I 165 (199)
T ss_dssp CSEEEEEEETTCGGGHHHHHHHHHHHHTSHHHHSBCTTSCBCCEEEEEECTTSTTCCCHHHHHHHHTHHHHHTTSCEE-E
T ss_pred CCEEEEEEECCcHHHHHHHHHHHHHHHhChhhhhcccccCCCCEEEEEECcCCCCCCCHHHHHHHhcchhhccCCeeE-E
Confidence 99999999999999999999998888653110 01379999999999998764332222221 1334554 8
Q ss_pred EEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 429 IPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 429 ~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++|||++ .||+++|++|.+.+...
T Consensus 166 ~~~Sa~~g~gv~~l~~~l~~~~~~~ 190 (199)
T 4bas_A 166 FASNGLKGTGVHEGFSWLQETASRQ 190 (199)
T ss_dssp EECBTTTTBTHHHHHHHHHHHHHHH
T ss_pred EEeeCCCccCHHHHHHHHHHHHHHH
Confidence 9999999 99999999999987543
No 83
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.88 E-value=4.1e-22 Score=182.17 Aligned_cols=163 Identities=17% Similarity=0.186 Sum_probs=120.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
+..++|+|+|.+|||||||+++|+++.+. .+.+|.+... ..+.++ + ..+.+||++|.+.+..++ ..+++.+|+
T Consensus 14 ~~~~~i~v~G~~~~GKssl~~~l~~~~~~-~~~~t~~~~~--~~~~~~-~-~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 86 (187)
T 1zj6_A 14 HQEHKVIIVGLDNAGKTTILYQFSMNEVV-HTSPTIGSNV--EEIVIN-N-TRFLMWDIGGQESLRSSW--NTYYTNTEF 86 (187)
T ss_dssp TSCEEEEEEESTTSSHHHHHHHHHTTSCE-EEECCSCSSC--EEEEET-T-EEEEEEECCC----CGGG--HHHHTTCCE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCCC-cCcCCCccce--EEEEEC-C-EEEEEEECCCCHhHHHHH--HHHhcCCCE
Confidence 55799999999999999999999988876 5556766432 345555 3 778889999998777665 458899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHH-----HhCCCCeEEEeccc-
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQ-----ELGIEPPIPVSMKS- 435 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~vSak~- 435 (504)
+++|||++++.+++.+..|+..+..... ..+.|+++|+||+|+..... .++..+... ..++ +++++||++
T Consensus 87 ii~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~NK~Dl~~~~~-~~~i~~~~~~~~~~~~~~-~~~~~Sa~~g 162 (187)
T 1zj6_A 87 VIVVVDSTDRERISVTREELYKMLAHED--LRKAGLLIFANKQDVKECMT-VAEISQFLKLTSIKDHQW-HIQACCALTG 162 (187)
T ss_dssp EEEEEETTCTTTHHHHHHHHHHHHTSGG--GTTCEEEEEEECTTSTTCCC-HHHHHHHHTGGGCCSSCE-EEEECBTTTT
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHhchh--hCCCeEEEEEECCCCcCCCC-HHHHHHHhChhhhcCCCc-EEEEccCCCC
Confidence 9999999999999999999988876421 24799999999999976432 222322221 2233 489999999
Q ss_pred cCHHHHHHHHHHHHhCCCCC
Q 010673 436 KDLNNVFSRIIWAAEHPHLN 455 (504)
Q Consensus 436 ~gi~el~~~l~~~~~~~~~~ 455 (504)
.|+++++++|.+.+..+...
T Consensus 163 ~gi~~l~~~l~~~~~~~~~~ 182 (187)
T 1zj6_A 163 EGLCQGLEWMMSRLKIRLEH 182 (187)
T ss_dssp BTHHHHHHHHHHHHCC----
T ss_pred cCHHHHHHHHHHHHHHHhhh
Confidence 99999999999988655443
No 84
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=99.88 E-value=1.2e-21 Score=178.72 Aligned_cols=161 Identities=19% Similarity=0.197 Sum_probs=124.4
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
++.++|+|+|++|||||||+++|++.. ...+.||.+. ....+.++ ...+.+||++|.+.+...+ ..+++.+|+
T Consensus 16 ~~~~~i~v~G~~~~GKssl~~~l~~~~-~~~~~~t~~~--~~~~~~~~--~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 88 (186)
T 1ksh_A 16 ERELRLLMLGLDNAGKTTILKKFNGED-VDTISPTLGF--NIKTLEHR--GFKLNIWDVGGQKSLRSYW--RNYFESTDG 88 (186)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHTTCC-CSSCCCCSSE--EEEEEEET--TEEEEEEEECCSHHHHTTG--GGGCTTCSE
T ss_pred CCeeEEEEECCCCCCHHHHHHHHhcCC-CCcccccCcc--ceEEEEEC--CEEEEEEECCCCHhHHHHH--HHHhcCCCE
Confidence 457999999999999999999999988 5566677774 34455555 3678899999998877766 568899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHH----HHhCCCCeEEEeccc-c
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVT----QELGIEPPIPVSMKS-K 436 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~----~~~~~~~~~~vSak~-~ 436 (504)
+++|||++++.+++.+..|+..+..... ..++|+++|+||+|+.......+..+.+. ...+. +++++||++ .
T Consensus 89 ii~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Sa~~~~ 165 (186)
T 1ksh_A 89 LIWVVDSADRQRMQDCQRELQSLLVEER--LAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHW-RIQGCSAVTGE 165 (186)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTCGG--GTTCEEEEEEECTTSTTCCCHHHHHHHTTGGGCCSSCE-EEEECCTTTCT
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHhChh--cCCCcEEEEEeCccCCCCCCHHHHHHHhChhhccCCce-EEEEeeCCCCC
Confidence 9999999999999999999888865421 34799999999999977543222111111 11223 489999999 9
Q ss_pred CHHHHHHHHHHHHhCC
Q 010673 437 DLNNVFSRIIWAAEHP 452 (504)
Q Consensus 437 gi~el~~~l~~~~~~~ 452 (504)
|+++++++|.+.+...
T Consensus 166 gi~~l~~~l~~~i~~~ 181 (186)
T 1ksh_A 166 DLLPGIDWLLDDISSR 181 (186)
T ss_dssp THHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999987654
No 85
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=99.88 E-value=7e-22 Score=180.91 Aligned_cols=161 Identities=16% Similarity=0.264 Sum_probs=125.3
Q ss_pred cccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccc
Q 010673 279 QTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALAS 358 (504)
Q Consensus 279 ~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ 358 (504)
...++.+||+|+|.+|||||||+++|++..+...+.+|++..+. .+.. +...+.+||++|.+.+..++ ..+++.
T Consensus 17 ~~~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~--~~~~--~~~~~~l~Dt~G~~~~~~~~--~~~~~~ 90 (188)
T 1zd9_A 17 RGSKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR--KITK--GNVTIKLWDIGGQPRFRSMW--ERYCRG 90 (188)
T ss_dssp --CCEEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCCCCSEEEE--EEEE--TTEEEEEEEECCSHHHHTTH--HHHHTT
T ss_pred cCCCCccEEEEECCCCCCHHHHHHHHHcCCCCCccCCCCceeEE--EEEe--CCEEEEEEECCCCHhHHHHH--HHHHcc
Confidence 34567899999999999999999999999988777788876554 2443 34678899999998877765 457899
Q ss_pred ccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCC-------CCeEEE
Q 010673 359 CDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGI-------EPPIPV 431 (504)
Q Consensus 359 ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~-------~~~~~v 431 (504)
+|++|+|||++++.++..+..|+..+..... ..++|+++|+||+|+...... +++...++. .++++|
T Consensus 91 ~d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~NK~Dl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 164 (188)
T 1zd9_A 91 VSAIVYMVDAADQEKIEASKNELHNLLDKPQ--LQGIPVLVLGNKRDLPGALDE----KELIEKMNLSAIQDREICCYSI 164 (188)
T ss_dssp CSEEEEEEETTCGGGHHHHHHHHHHHHTCGG--GTTCCEEEEEECTTSTTCCCH----HHHHHHTTGGGCCSSCEEEEEC
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHhCcc--cCCCCEEEEEECCCCccCCCH----HHHHHHhChhhhccCCeeEEEE
Confidence 9999999999999999999999888865311 258999999999999764322 222333221 137999
Q ss_pred eccc-cCHHHHHHHHHHHHhC
Q 010673 432 SMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 432 Sak~-~gi~el~~~l~~~~~~ 451 (504)
||++ .|++++|++|.+.+..
T Consensus 165 SA~~g~gv~~l~~~l~~~~~~ 185 (188)
T 1zd9_A 165 SCKEKDNIDITLQWLIQHSKS 185 (188)
T ss_dssp CTTTCTTHHHHHHHHHHTCC-
T ss_pred ECCCCCCHHHHHHHHHHHHHh
Confidence 9999 9999999999987643
No 86
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=99.88 E-value=7.3e-22 Score=175.98 Aligned_cols=153 Identities=22% Similarity=0.246 Sum_probs=118.9
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEE
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIF 364 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iil 364 (504)
+||+++|++|||||||+++|+++.+.. +.||.+. ....+... ...+.+||++|.+.+..++ ..+++++|++++
T Consensus 1 ~ki~~~G~~~~GKssl~~~l~~~~~~~-~~~t~~~--~~~~~~~~--~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~i~ 73 (164)
T 1r8s_A 1 MRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGF--NVETVEYK--NISFTVWDVGGQDKIRPLW--RHYFQNTQGLIF 73 (164)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHCSSC-CCCCSSC--CEEEEECS--SCEEEEEECCCCGGGHHHH--HHHTTTCSEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHcCCcCc-ccCcCce--eEEEEEEC--CEEEEEEEcCCChhhHHHH--HHHhccCCEEEE
Confidence 589999999999999999999888764 4567663 33445554 3678899999998877765 458899999999
Q ss_pred EEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC-------CeEEEeccc-c
Q 010673 365 VYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE-------PPIPVSMKS-K 436 (504)
Q Consensus 365 V~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~-------~~~~vSak~-~ 436 (504)
|||++++.+|..+..|+..+..... ..+.|+++|+||+|+...... +++....+.. +++++||++ .
T Consensus 74 v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Sa~~~~ 147 (164)
T 1r8s_A 74 VVDSNDRERVNEAREELMRMLAEDE--LRDAVLLVFANKQDLPNAMNA----AEITDKLGLHSLRHRNWYIQATCATSGD 147 (164)
T ss_dssp EEETTCGGGHHHHHHHHHHHHTCGG--GTTCEEEEEEECTTSTTCCCH----HHHHHHTTGGGCSSCCEEEEECBTTTTB
T ss_pred EEECCCHHHHHHHHHHHHHHHhchh--hcCCeEEEEEECcCCcCCCCH----HHHHHHhCcccccCccEEEEEcccCCCc
Confidence 9999999999999999888865321 357999999999999764321 2233333211 389999999 9
Q ss_pred CHHHHHHHHHHHHh
Q 010673 437 DLNNVFSRIIWAAE 450 (504)
Q Consensus 437 gi~el~~~l~~~~~ 450 (504)
|+++++++|.+.+.
T Consensus 148 gi~~l~~~l~~~i~ 161 (164)
T 1r8s_A 148 GLYEGLDWLSNQLR 161 (164)
T ss_dssp THHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998764
No 87
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=99.87 E-value=1.5e-22 Score=186.14 Aligned_cols=163 Identities=18% Similarity=0.163 Sum_probs=124.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCC-----------CCccceEEEEEE-EcCCCcEEEEEEecCChhhHhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYA-----------PTTGEQYAVNVV-DQPGGNKKTLILQEIPEEGVKK 348 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~-----------~T~~~~~~~~~v-~~~~~~~~~li~d~~g~~~~~~ 348 (504)
....+||+|+|++|||||||++.+.+. +...+. +|.+.++....+ .+++....+.+||++|++.+..
T Consensus 11 ~~~~~ki~vvG~~~~GKssL~~~l~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~ 89 (198)
T 3t1o_A 11 REINFKIVYYGPGLSGKTTNLKWIYSK-VPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFKTRFHLYTVPGQVFYNA 89 (198)
T ss_dssp TEEEEEEEEECSTTSSHHHHHHHHHHT-SCGGGBCCCEEEECSSCEEEEEEECCSSCCCSSSCEEEEEEEECCSCCSCSH
T ss_pred cccccEEEEECCCCCCHHHHHHHHHhh-ccccccccccccccccccceeeeecccccccccCCceEEEEEeCCChHHHHH
Confidence 356799999999999999999776654 443332 233333332223 3443445677899999988777
Q ss_pred hhhhhhhcccccEEEEEEeCC------CcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHH
Q 010673 349 ILSNKEALASCDVTIFVYDSS------DEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQE 422 (504)
Q Consensus 349 ~~~~~~~~~~ad~iilV~D~s------~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~ 422 (504)
++ ..+++.+|++|+|||++ +..++..+..|+..+... ..++|+++|+||+|+... ...++++++++.
T Consensus 90 ~~--~~~~~~~d~~i~v~D~~~~~~~~~~~s~~~l~~~l~~~~~~----~~~~piilv~NK~Dl~~~-~~~~~~~~~~~~ 162 (198)
T 3t1o_A 90 SR--KLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEYGLT----LDDVPIVIQVNKRDLPDA-LPVEMVRAVVDP 162 (198)
T ss_dssp HH--HHHTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCC----TTSSCEEEEEECTTSTTC-CCHHHHHHHHCT
T ss_pred HH--HHHHhcCCEEEEEEECCcchhhHhHHHHHHHHHHHHhhccc----cCCCCEEEEEEchhcccc-cCHHHHHHHHHh
Confidence 76 45889999999999999 556777777888777432 468999999999999764 445578889999
Q ss_pred hCCCCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 423 LGIEPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 423 ~~~~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
+++.+++++||++ .|++++|++|.+.+..
T Consensus 163 ~~~~~~~~~Sa~~~~gv~~l~~~l~~~i~~ 192 (198)
T 3t1o_A 163 EGKFPVLEAVATEGKGVFETLKEVSRLVLA 192 (198)
T ss_dssp TCCSCEEECBGGGTBTHHHHHHHHHHHHHH
T ss_pred cCCceEEEEecCCCcCHHHHHHHHHHHHHH
Confidence 9984499999999 9999999999988753
No 88
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=99.87 E-value=9.9e-22 Score=181.65 Aligned_cols=157 Identities=17% Similarity=0.172 Sum_probs=115.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
.+.++|+++|++|||||||+++|+++.+. .+.+|.+... ..+.++ + ..+.+||++|++.+..++ ..+++.+|+
T Consensus 23 ~~~~ki~lvG~~~vGKSsLi~~l~~~~~~-~~~~t~~~~~--~~~~~~-~-~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 95 (198)
T 1f6b_A 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPTS--EELTIA-G-MTFTTFDLGGHIQARRVW--KNYLPAING 95 (198)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHHSCC-------CCCCCSC--EEEEET-T-EEEEEEEECC----CCGG--GGGGGGCSE
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhcCCCC-ccCCCCCcee--EEEEEC-C-EEEEEEECCCcHhhHHHH--HHHHhcCCE
Confidence 34579999999999999999999998875 3456666543 346666 4 677889999998777765 458899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhC----------------C
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELG----------------I 425 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~----------------~ 425 (504)
+++|||++++.+|..+..|+..+.+... ..++|+++|+||+|+.. ....+++.+++.... .
T Consensus 96 ~i~v~D~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~NK~Dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1f6b_A 96 IVFLVDCADHERLLESKEELDSLMTDET--IANVPILILGNKIDRPE-AISEERLREMFGLYGQTTGKGSVSLKELNARP 172 (198)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTCGG--GTTSCEEEEEECTTSTT-CCCHHHHHHHHTCTTTCCCSSCCCTTTCCSCC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHhCcc--cCCCcEEEEEECCCccc-cCCHHHHHHHhCcccccccccccccccccCce
Confidence 9999999999999999999988875421 35899999999999976 223345555544321 1
Q ss_pred CCeEEEeccc-cCHHHHHHHHHHH
Q 010673 426 EPPIPVSMKS-KDLNNVFSRIIWA 448 (504)
Q Consensus 426 ~~~~~vSak~-~gi~el~~~l~~~ 448 (504)
.++++|||++ .|++++|++|.+.
T Consensus 173 ~~~~~~SA~~g~gv~~l~~~l~~~ 196 (198)
T 1f6b_A 173 LEVFMCSVLKRQGYGEGFRWMAQY 196 (198)
T ss_dssp EEEEECBTTTTBSHHHHHHHHHTT
T ss_pred EEEEEEECCCCCCHHHHHHHHHHh
Confidence 1489999999 9999999999764
No 89
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=99.87 E-value=1.4e-21 Score=179.35 Aligned_cols=156 Identities=15% Similarity=0.168 Sum_probs=120.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
.+.++|+++|++|||||||+++|+++.+.. +.+|.+.. ...+.++ + ..+.+||++|.+.+..++ ..+++.+|+
T Consensus 21 ~~~~ki~~vG~~~vGKSsli~~l~~~~~~~-~~~t~~~~--~~~~~~~-~-~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 93 (190)
T 1m2o_B 21 NKHGKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPT--SEELAIG-N-IKFTTFDLGGHIQARRLW--KDYFPEVNG 93 (190)
T ss_dssp ---CEEEEEESTTSSHHHHHHHHHHSCCCC-CCCCCSCE--EEEEEET-T-EEEEEEECCCSGGGTTSG--GGGCTTCCE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCCCc-cccCCCCC--eEEEEEC-C-EEEEEEECCCCHHHHHHH--HHHHhcCCE
Confidence 345699999999999999999999988753 45676653 3456666 4 777889999998777665 457899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHh------------CCCCeE
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQEL------------GIEPPI 429 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~------------~~~~~~ 429 (504)
+++|||++++.+|+.+..|+..+..... ..++|+++|+||+|+... ...++..++.... +. +++
T Consensus 94 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~NK~Dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 169 (190)
T 1m2o_B 94 IVFLVDAADPERFDEARVELDALFNIAE--LKDVPFVILGNKIDAPNA-VSEAELRSALGLLNTTGSQRIEGQRPV-EVF 169 (190)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTCGG--GTTCCEEEEEECTTSTTC-CCHHHHHHHTTCSSCCC---CCSSCCE-EEE
T ss_pred EEEEEECCChHHHHHHHHHHHHHHcchh--hcCCCEEEEEECCCCcCC-CCHHHHHHHhCCccccccccccccceE-EEE
Confidence 9999999999999999999988875421 357999999999999762 2233444433221 22 489
Q ss_pred EEeccc-cCHHHHHHHHHHH
Q 010673 430 PVSMKS-KDLNNVFSRIIWA 448 (504)
Q Consensus 430 ~vSak~-~gi~el~~~l~~~ 448 (504)
+|||++ .|++++|++|.+.
T Consensus 170 ~~Sa~~g~gi~~l~~~l~~~ 189 (190)
T 1m2o_B 170 MCSVVMRNGYLEAFQWLSQY 189 (190)
T ss_dssp ECBTTTTBSHHHHHHHHHTT
T ss_pred EeECCcCCCHHHHHHHHHhh
Confidence 999999 9999999999753
No 90
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=99.87 E-value=2.3e-22 Score=183.56 Aligned_cols=163 Identities=13% Similarity=0.107 Sum_probs=119.4
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcC--CCCCCCCCCccceEEEEEEEc---CCCcEEEEEEecCChhhHhhhhhhhhhccc
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLER--PFSENYAPTTGEQYAVNVVDQ---PGGNKKTLILQEIPEEGVKKILSNKEALAS 358 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~--~~~~~~~~T~~~~~~~~~v~~---~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ 358 (504)
.+||+|+|++|||||||+++|++. .+...+.+|++..+....+.+ .+....+.+||++|.+.+..+. ..+++.
T Consensus 2 ~~kv~ivG~~gvGKStLl~~l~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~ 79 (184)
T 2zej_A 2 RMKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDFAGREEFYSTH--PHFMTQ 79 (184)
T ss_dssp -CEEEEESCTTSSHHHHHHHHTCC-----------CSEEEEEEEC---------CEEEEEEECSHHHHHTTS--HHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHhcCCCccCCCcceeccEEeEEeeeccccCCCCceEEEEEecCCCHHHHHhh--HHHccC
Confidence 479999999999999999999985 444556678776665544443 1234567789999998877765 457889
Q ss_pred ccEEEEEEeCCCc-ccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch----HHHHHHHHHhCCC---CeEE
Q 010673 359 CDVTIFVYDSSDE-YSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV----QDSARVTQELGIE---PPIP 430 (504)
Q Consensus 359 ad~iilV~D~s~~-~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~----~~~~~~~~~~~~~---~~~~ 430 (504)
+|++++|||++++ .++..+..|+..+... .++.|+++|+||+|+....... ...+.+++.++++ ++++
T Consensus 80 ~~~~i~v~d~~~~~~s~~~~~~~~~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (184)
T 2zej_A 80 RALYLAVYDLSKGQAEVDAMKPWLFNIKAR----ASSSPVILVGTHLDVSDEKQRKACMSKITKELLNKRGFPAIRDYHF 155 (184)
T ss_dssp SEEEEEEEEGGGCHHHHHTHHHHHHHHHHH----CTTCEEEEEEECGGGCCHHHHHHHHHHHHHHTTTCTTSCEEEEEEE
T ss_pred CcEEEEEEeCCcchhHHHHHHHHHHHHHhh----CCCCcEEEEEECCCcccchhhHHHHHHHHHHHHHhcCCcchhheEE
Confidence 9999999999998 5799999999988765 3479999999999998754432 2345566666765 3899
Q ss_pred Eeccc-c-CHHHHHHHHHHHHhCC
Q 010673 431 VSMKS-K-DLNNVFSRIIWAAEHP 452 (504)
Q Consensus 431 vSak~-~-gi~el~~~l~~~~~~~ 452 (504)
+||++ . |++++++.|.+.+...
T Consensus 156 ~Sa~~~~~~~~~l~~~i~~~~~~~ 179 (184)
T 2zej_A 156 VNATEESDALAKLRKTIINESLNF 179 (184)
T ss_dssp CCTTSCCHHHHHHHHHHHHHHHCC
T ss_pred EecccCchhHHHHHHHHHHHHhcc
Confidence 99999 7 9999999999887553
No 91
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=99.87 E-value=3.7e-21 Score=176.22 Aligned_cols=162 Identities=17% Similarity=0.192 Sum_probs=124.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCC-CCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERP-FSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~-~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
....+||+|+|.+|||||||+++|++.. +...+.+|.+ +....+.++ + ..+.+||++|.+.+..++ ..+++.+
T Consensus 18 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~t~~--~~~~~~~~~-~-~~~~l~Dt~G~~~~~~~~--~~~~~~~ 91 (190)
T 2h57_A 18 GSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIG--FSIEKFKSS-S-LSFTVFDMSGQGRYRNLW--EHYYKEG 91 (190)
T ss_dssp ---CEEEEEEECTTSSHHHHHHHTSCGGGCCSSCCCCSS--EEEEEEECS-S-CEEEEEEECCSTTTGGGG--GGGGGGC
T ss_pred CCCccEEEEECCCCCCHHHHHHHHhcCCCCCCCcCCccc--eeEEEEEEC-C-EEEEEEECCCCHHHHHHH--HHHHhcC
Confidence 3557899999999999999999999987 4555666776 455567776 3 677899999988777766 5688999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHH--H---hCCCCeEEEecc
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQ--E---LGIEPPIPVSMK 434 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~--~---~~~~~~~~vSak 434 (504)
|++++|||++++.++..+..|+..+.........++|+++|+||+|+..... .++..++.. . .++ +++++||+
T Consensus 92 d~ii~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~Sa~ 169 (190)
T 2h57_A 92 QAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVT-SVKVSQLLCLENIKDKPW-HICASDAI 169 (190)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHHHSTTTTTSCCCEEEEEECTTSTTCCC-HHHHHHHHTGGGCCSSCE-EEEECBTT
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHhChhhccCCCeEEEEEeCcCcccCCC-HHHHHHHhChhhccCCce-EEEEccCC
Confidence 9999999999999999999999888764211015899999999999976432 233444432 1 233 38999999
Q ss_pred c-cCHHHHHHHHHHHHh
Q 010673 435 S-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~ 450 (504)
+ .|+++++++|.+.+.
T Consensus 170 ~~~gi~~l~~~l~~~i~ 186 (190)
T 2h57_A 170 KGEGLQEGVDWLQDQIQ 186 (190)
T ss_dssp TTBTHHHHHHHHHHHC-
T ss_pred CCcCHHHHHHHHHHHHH
Confidence 9 999999999998764
No 92
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=99.87 E-value=1.7e-21 Score=177.35 Aligned_cols=156 Identities=23% Similarity=0.312 Sum_probs=120.7
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....++|+++|++|||||||+++|++..+. .+.||.+. ....+.++ + ..+.+||++|++.+...+ ..+++.+|
T Consensus 13 ~~~~~ki~ivG~~~vGKSsL~~~l~~~~~~-~~~~t~g~--~~~~~~~~-~-~~l~i~Dt~G~~~~~~~~--~~~~~~~~ 85 (181)
T 1fzq_A 13 PDQEVRILLLGLDNAGKTTLLKQLASEDIS-HITPTQGF--NIKSVQSQ-G-FKLNVWDIGGQRKIRPYW--RSYFENTD 85 (181)
T ss_dssp CSSCEEEEEEESTTSSHHHHHHHHCCSCCE-EEEEETTE--EEEEEEET-T-EEEEEEECSSCGGGHHHH--HHHHTTCS
T ss_pred CCCceEEEEECCCCCCHHHHHHHHhcCCCC-cccCcCCe--EEEEEEEC-C-EEEEEEECCCCHHHHHHH--HHHhCCCC
Confidence 356799999999999999999999988653 34466663 34456665 3 677889999998877765 45889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhC--------CCCeEEEe
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELG--------IEPPIPVS 432 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~--------~~~~~~vS 432 (504)
++++|||++++.++..+..|+..+..... ..++|+++|+||+|+...... +++.+.++ . ++++||
T Consensus 86 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~NK~Dl~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~S 158 (181)
T 1fzq_A 86 ILIYVIDSADRKRFEETGQELTELLEEEK--LSCVPVLIFANKQDLLTAAPA----SEIAEGLNLHTIRDRVW-QIQSCS 158 (181)
T ss_dssp EEEEEEETTCGGGHHHHHHHHHHHTTCGG--GTTCCEEEEEECTTSTTCCCH----HHHHHHTTGGGCCSSCE-EEEECC
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHhChh--hcCCCEEEEEECcCcccCCCH----HHHHHHhCchhccCCce-EEEEcc
Confidence 99999999999999999888887754311 357999999999999865432 22333322 2 389999
Q ss_pred ccc-cCHHHHHHHHHHHHh
Q 010673 433 MKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 433 ak~-~gi~el~~~l~~~~~ 450 (504)
|++ .|++++|++|.+.+.
T Consensus 159 a~~g~gi~~l~~~l~~~~~ 177 (181)
T 1fzq_A 159 ALTGEGVQDGMNWVCKNVN 177 (181)
T ss_dssp TTTCTTHHHHHHHHHHTC-
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 999 999999999998764
No 93
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=99.87 E-value=3.2e-21 Score=177.29 Aligned_cols=157 Identities=18% Similarity=0.242 Sum_probs=117.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
.+..+||+|+|++|||||||+++|+++.+.. +.||.+ +....+... ...+.+||++|.+.+..++ ..+++.+|
T Consensus 26 ~~~~~ki~v~G~~~vGKSsLi~~l~~~~~~~-~~~t~~--~~~~~~~~~--~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 98 (192)
T 2b6h_A 26 GKKQMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVETVEYK--NICFTVWDVGGQDKIRPLW--RHYFQNTQ 98 (192)
T ss_dssp TTSCEEEEEEESTTSSHHHHHHHHCSSCCEE-EEEETT--EEEEEEEET--TEEEEEEECC-----CTTH--HHHHHTCC
T ss_pred cCCccEEEEECCCCCCHHHHHHHHHhCCccc-cCCcCc--eeEEEEEEC--CEEEEEEECCCCHhHHHHH--HHHhccCC
Confidence 3567999999999999999999999888753 445665 344445554 3677889999998776665 45789999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC-------CeEEEec
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE-------PPIPVSM 433 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~-------~~~~vSa 433 (504)
++++|||++++.++..+..|+..+..... ..++|+++|+||+|+..... .+++.+.++.. ++++|||
T Consensus 99 ~iilv~D~~~~~s~~~~~~~l~~~~~~~~--~~~~piilv~NK~Dl~~~~~----~~~i~~~~~~~~~~~~~~~~~~~SA 172 (192)
T 2b6h_A 99 GLIFVVDSNDRERVQESADELQKMLQEDE--LRDAVLLVFANKQDMPNAMP----VSELTDKLGLQHLRSRTWYVQATCA 172 (192)
T ss_dssp EEEEEEETTCGGGHHHHHHHHHHHHTCGG--GTTCEEEEEEECTTSTTCCC----HHHHHHHTTGGGCSSCCEEEEECBT
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHhcccc--cCCCeEEEEEECCCCCCCCC----HHHHHHHhCcccccCCceEEEECcC
Confidence 99999999999999999999988865321 34799999999999976433 22333333321 3799999
Q ss_pred cc-cCHHHHHHHHHHHHh
Q 010673 434 KS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~ 450 (504)
++ .|+++++++|.+.+.
T Consensus 173 ~~g~gi~~l~~~l~~~i~ 190 (192)
T 2b6h_A 173 TQGTGLYDGLDWLSHELS 190 (192)
T ss_dssp TTTBTHHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHh
Confidence 99 999999999998764
No 94
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.86 E-value=4.1e-21 Score=191.64 Aligned_cols=165 Identities=21% Similarity=0.329 Sum_probs=136.1
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
.+..++|+++|.+|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|.+.+..+. ..+++.+|
T Consensus 152 ~~~~~~i~i~G~~~~GKssli~~~~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 228 (332)
T 2wkq_A 152 AKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGLEDYDRLR--PLSYPQTD 228 (332)
T ss_dssp HTTCEEEEEEESTTSSHHHHHHHHHHSCCCCSCCCCSEEEEE-EEEEETTEEEEEEEEEECCCGGGTTTG--GGGCTTCS
T ss_pred ccceeEEEEECCCCCChHHHHHHHHhCCCCcccCCcccceeE-EEEEECCEEEEEEEEeCCCchhhhHHH--HHhccCCC
Confidence 466799999999999999999999999988888888887554 346666444455689999988777665 45889999
Q ss_pred EEEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCC------------ccc-hHHHHHHHHHhCCC
Q 010673 361 VTIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPY------------TMA-VQDSARVTQELGIE 426 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~------------~~~-~~~~~~~~~~~~~~ 426 (504)
++++|||++++.++..+. .|+..+... ..++|+++|+||+|+... +.. .++..++++.++..
T Consensus 229 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 304 (332)
T 2wkq_A 229 VFLICFSLVSPASFHHVRAKWYPEVRHH----CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAV 304 (332)
T ss_dssp EEEEEEETTCHHHHHHHHHTHHHHHHHH----CTTSCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCS
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHhh----CCCCcEEEEEEchhcccccchhhhccccccccccHHHHHHHHHHcCCc
Confidence 999999999999999986 788888766 448999999999998653 222 34788899999985
Q ss_pred CeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 427 PPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 427 ~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++++|||++ .|++++|+.|.+.+..|
T Consensus 305 ~~~~~Sa~~~~gi~~l~~~l~~~~~~~ 331 (332)
T 2wkq_A 305 KYLECSALTQRGLKTVFDEAIRAVLCP 331 (332)
T ss_dssp EEEECCTTTCTTHHHHHHHHHHHHHC-
T ss_pred EEEEecCCCCcCHHHHHHHHHHHHhcC
Confidence 599999999 99999999999988765
No 95
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=99.86 E-value=1.7e-21 Score=177.06 Aligned_cols=158 Identities=16% Similarity=0.193 Sum_probs=118.9
Q ss_pred ccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccc
Q 010673 280 TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASC 359 (504)
Q Consensus 280 ~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~a 359 (504)
.....+||+|+|.+|||||||+++|++..+ ..+.+|.+..+ ..+.++ + ..+.+||++|.+.+..++ ..+++.+
T Consensus 17 ~~~~~~~i~v~G~~~~GKSsli~~l~~~~~-~~~~~t~~~~~--~~~~~~-~-~~~~i~Dt~G~~~~~~~~--~~~~~~~ 89 (181)
T 2h17_A 17 RGSQEHKVIIVGLDNAGKTTILYQFSMNEV-VHTSPTIGSNV--EEIVIN-N-TRFLMWDIGGQESLRSSW--NTYYTNT 89 (181)
T ss_dssp ----CEEEEEEEETTSSHHHHHHHHHTTSC-EEEECCSSSSC--EEEEET-T-EEEEEEEESSSGGGTCGG--GGGGTTC
T ss_pred CCCceeEEEEECCCCCCHHHHHHHHhcCCC-CccCCcCceee--EEEEEC-C-EEEEEEECCCCHhHHHHH--HHHhccC
Confidence 345679999999999999999999999988 44456666433 345555 3 778889999998877765 5688999
Q ss_pred cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHH-----HhCCCCeEEEecc
Q 010673 360 DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQ-----ELGIEPPIPVSMK 434 (504)
Q Consensus 360 d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~vSak 434 (504)
|++++|||++++.+++.+..|+..+..... ..++|+++|+||+|+...... +++.+... ..++ +++++||+
T Consensus 90 d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~NK~Dl~~~~~~-~~i~~~~~~~~~~~~~~-~~~~~Sa~ 165 (181)
T 2h17_A 90 EFVIVVVDSTDRERISVTREELYKMLAHED--LRKAGLLIFANKQDVKECMTV-AEISQFLKLTSIKDHQW-HIQACCAL 165 (181)
T ss_dssp CEEEEEEETTCTTTHHHHHHHHHHHHTCGG--GTTCEEEEEEECTTSTTCCCH-HHHHHHTTGGGCCSSCE-EEEECBTT
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHhChh--hCCCeEEEEEECCCcccCCCH-HHHHHHhCcccccCCce-EEEEccCC
Confidence 999999999999999999999888875321 248999999999999764322 22222211 1223 38999999
Q ss_pred c-cCHHHHHHHHHHH
Q 010673 435 S-KDLNNVFSRIIWA 448 (504)
Q Consensus 435 ~-~gi~el~~~l~~~ 448 (504)
+ .|++++|++|.+.
T Consensus 166 ~g~gi~~l~~~l~~~ 180 (181)
T 2h17_A 166 TGEGLCQGLEWMMSR 180 (181)
T ss_dssp TTBTHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHhh
Confidence 9 9999999999753
No 96
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=99.85 E-value=3.5e-21 Score=176.17 Aligned_cols=161 Identities=19% Similarity=0.197 Sum_probs=122.2
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
++.+||+|+|++|||||||+++|+++.+.. +.||.+.. ...+..+ ...+.+||++|++.+..++ ..+++.+|+
T Consensus 20 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~-~~~t~~~~--~~~~~~~--~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 92 (189)
T 2x77_A 20 DRKIRVLMLGLDNAGKTSILYRLHLGDVVT-TVPTVGVN--LETLQYK--NISFEVWDLGGQTGVRPYW--RCYFSDTDA 92 (189)
T ss_dssp TSCEEEEEEEETTSSHHHHHHHTCCSCCEE-ECSSTTCC--EEEEEET--TEEEEEEEECCSSSSCCCC--SSSSTTCCE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHcCCCCC-cCCCCceE--EEEEEEC--CEEEEEEECCCCHhHHHHH--HHHhhcCCE
Confidence 457899999999999999999999887753 45676643 3345554 3678899999987776665 457899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHH----HHhCCCCeEEEeccc-c
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVT----QELGIEPPIPVSMKS-K 436 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~----~~~~~~~~~~vSak~-~ 436 (504)
+++|||++++.++..+..|+..+..... ..+.|+++|+||+|+.......+..+.+. ...++ ++++|||++ .
T Consensus 93 ii~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Sa~~~~ 169 (189)
T 2x77_A 93 VIYVVDSTDRDRMGVAKHELYALLDEDE--LRKSLLLIFANKQDLPDAASEAEIAEQLGVSSIMNRTW-TIVKSSSKTGD 169 (189)
T ss_dssp EEEEEETTCCTTHHHHHHHHHHHHTCST--TTTCEEEEEEECTTSTTCCCHHHHHHHTTGGGCCSSCE-EEEECCTTTCT
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHhhhh--cCCCeEEEEEECCCCcCCCCHHHHHHHhChhhccCCce-EEEEccCCCcc
Confidence 9999999999999999988888765321 35899999999999977543222111111 11223 389999999 9
Q ss_pred CHHHHHHHHHHHHhCC
Q 010673 437 DLNNVFSRIIWAAEHP 452 (504)
Q Consensus 437 gi~el~~~l~~~~~~~ 452 (504)
|+++++++|.+.+...
T Consensus 170 gi~~l~~~l~~~i~~~ 185 (189)
T 2x77_A 170 GLVEGMDWLVERLREQ 185 (189)
T ss_dssp THHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999987543
No 97
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=99.76 E-value=3.9e-23 Score=191.80 Aligned_cols=161 Identities=20% Similarity=0.323 Sum_probs=129.3
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...+||+|+|.+|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..+++++|+
T Consensus 28 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 104 (204)
T 3th5_A 28 GQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGQEDYDRLR--PLSYPQTDV 104 (204)
Confidence 56799999999999999999999998887777777776553 335555344455689999987777665 457899999
Q ss_pred EEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCCc------------cc-hHHHHHHHHHhCCCC
Q 010673 362 TIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPYT------------MA-VQDSARVTQELGIEP 427 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~------------~~-~~~~~~~~~~~~~~~ 427 (504)
+++|||++++.++..+. .|+..+... ..++|+++|+||+|+.... .. .++..++++.++..+
T Consensus 105 iilv~D~~~~~s~~~~~~~~~~~l~~~----~~~~piilv~NK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 180 (204)
T 3th5_A 105 FLICFSLVSPASFENVRAKWYPEVRHH----CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK 180 (204)
Confidence 99999999999999886 788877654 3489999999999997643 12 236677888888745
Q ss_pred eEEEeccc-cCHHHHHHHHHHHH
Q 010673 428 PIPVSMKS-KDLNNVFSRIIWAA 449 (504)
Q Consensus 428 ~~~vSak~-~gi~el~~~l~~~~ 449 (504)
+++|||++ .|++++|+.|.+.+
T Consensus 181 ~~~vSA~~g~gi~~l~~~l~~~i 203 (204)
T 3th5_A 181 YLECSALTQRGLKTVFDEAIRAV 203 (204)
Confidence 89999999 99999999998754
No 98
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.85 E-value=1.2e-20 Score=171.37 Aligned_cols=159 Identities=17% Similarity=0.176 Sum_probs=117.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
+..++|+|+|++|||||||+++|+++.+ ..+.+|.+.. ...+.++ + ..+.+||++|.+.+...+ ..+++.+|+
T Consensus 16 ~~~~~i~v~G~~~~GKssli~~l~~~~~-~~~~~t~~~~--~~~~~~~-~-~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 88 (183)
T 1moz_A 16 NKELRILILGLDGAGKTTILYRLQIGEV-VTTKPTIGFN--VETLSYK-N-LKLNVWDLGGQTSIRPYW--RCYYADTAA 88 (183)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHTCCSEE-EEECSSTTCC--EEEEEET-T-EEEEEEEEC----CCTTG--GGTTTTEEE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCc-CccCCcCccc--eEEEEEC-C-EEEEEEECCCCHhHHHHH--HHHhccCCE
Confidence 5679999999999999999999998877 4455676643 3345555 3 677889999987766665 568899999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC----CeEEEeccc-c
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE----PPIPVSMKS-K 436 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~----~~~~vSak~-~ 436 (504)
+++|||++++.+++.+..|+..+..... ..+.|+++|+||+|+..... .+++.+........ +++++||++ .
T Consensus 89 ii~v~d~~~~~s~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~~-~~~i~~~~~~~~~~~~~~~~~~~Sa~~~~ 165 (183)
T 1moz_A 89 VIFVVDSTDKDRMSTASKELHLMLQEEE--LQDAALLVFANKQDQPGALS-ASEVSKELNLVELKDRSWSIVASSAIKGE 165 (183)
T ss_dssp EEEEEETTCTTTHHHHHHHHHHHTTSST--TSSCEEEEEEECTTSTTCCC-HHHHHHHTTTTTCCSSCEEEEEEBGGGTB
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHcChh--hCCCeEEEEEECCCCCCCCC-HHHHHHHhCcccccCCceEEEEccCCCCc
Confidence 9999999999999999999888765421 35899999999999976432 22222222111111 489999999 9
Q ss_pred CHHHHHHHHHHHHh
Q 010673 437 DLNNVFSRIIWAAE 450 (504)
Q Consensus 437 gi~el~~~l~~~~~ 450 (504)
|+++++++|.+.+.
T Consensus 166 gi~~l~~~l~~~~~ 179 (183)
T 1moz_A 166 GITEGLDWLIDVIK 179 (183)
T ss_dssp THHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999998764
No 99
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=99.85 E-value=2.3e-20 Score=172.44 Aligned_cols=163 Identities=19% Similarity=0.329 Sum_probs=132.3
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...++|+|+|++|||||||+++|++..+...+.+|.+..+....+.+++......+||++|.+.+..+. ..+++.+|+
T Consensus 3 ~~~~kv~lvG~~g~GKSTLl~~l~~~~~~~~~~~t~~~~~~~~~i~~~g~~~~~~i~Dt~g~~~~~~~~--~~~~~~~~~ 80 (199)
T 2f9l_A 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRIT--SAYYRGAVG 80 (199)
T ss_dssp SEEEEEEEESSTTSSHHHHHHHHHHSCCCC---CCCSCEEEEEEEEETTEEEEEEEEECSSGGGTTCCC--HHHHTTCSE
T ss_pred cceEEEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEECCCchhhhhhh--HHHHhcCCE
Confidence 346899999999999999999999999888888888877777778888433456678999987766554 456789999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||++++.++..+..|+..+.... ..+.|+++|+||+|+...... ...+..++...++. ++++||++ .|++
T Consensus 81 ~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~~i~~v~nK~Dl~~~~~~~~~~a~~l~~~~~~~-~~d~Sal~~~~i~ 156 (199)
T 2f9l_A 81 ALLVYDIAKHLTYENVERWLKELRDHA---DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLS-FIETSALDSTNVE 156 (199)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCE-EEECCTTTCTTHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCeEEEEEECcccccccCcCHHHHHHHHHHcCCe-EEEEeCCCCCCHH
Confidence 999999999999998888988776542 347899999999999765444 34788899998886 89999999 9999
Q ss_pred HHHHHHHHHHh
Q 010673 440 NVFSRIIWAAE 450 (504)
Q Consensus 440 el~~~l~~~~~ 450 (504)
++++.|.+.+.
T Consensus 157 ~l~~~l~~~~~ 167 (199)
T 2f9l_A 157 EAFKNILTEIY 167 (199)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998774
No 100
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=99.85 E-value=6e-21 Score=170.90 Aligned_cols=152 Identities=18% Similarity=0.223 Sum_probs=111.2
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHh------hhhhhhhhcc
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK------KILSNKEALA 357 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~------~~~~~~~~~~ 357 (504)
.++|+++|++|||||||+++|++..+.....++++.......+.++ + ..+.+||++|...+. .+. ..++.
T Consensus 3 ~~~v~lvG~~gvGKStL~~~l~~~~~~~~~~~~~t~~~~~~~~~~~-~-~~l~i~Dt~G~~~~~~~~~~~~~~--~~~~~ 78 (165)
T 2wji_A 3 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYN-G-EKFKVVDLPGVYSLTANSIDEIIA--RDYII 78 (165)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHCCSSSCC-----CCCCCEEEEEET-T-EEEEEEECCCCSCSSSSSHHHHHH--HHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHhCCCeeccCCCCcceeeeEEEEEEC-C-cEEEEEECCCcccCCCcchhHHHH--HHHHh
Confidence 4799999999999999999999987654444443333334445555 3 567889999976542 222 23443
Q ss_pred --cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc
Q 010673 358 --SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS 435 (504)
Q Consensus 358 --~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~ 435 (504)
.+|++++|+|+++.+ ....|+..+.+. ++|+++|+||+|+...+....+.+++++.++.+ ++++||++
T Consensus 79 ~~~~~~~i~v~D~~~~~---~~~~~~~~~~~~------~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~SA~~ 148 (165)
T 2wji_A 79 NEKPDLVVNIVDATALE---RNLYLTLQLMEM------GANLLLALNKMDLAKSLGIEIDVDKLEKILGVK-VVPLSAAK 148 (165)
T ss_dssp HHCCSEEEEEEETTCHH---HHHHHHHHHHHT------TCCEEEEEECHHHHHHTTCCCCHHHHHHHHTSC-EEECBGGG
T ss_pred cCCCCEEEEEecCCchh---HhHHHHHHHHhc------CCCEEEEEEchHhccccChhhHHHHHHHHhCCC-EEEEEcCC
Confidence 899999999998753 445677777643 799999999999865333323467888888986 99999999
Q ss_pred -cCHHHHHHHHHHHH
Q 010673 436 -KDLNNVFSRIIWAA 449 (504)
Q Consensus 436 -~gi~el~~~l~~~~ 449 (504)
.|++++|++|.+.+
T Consensus 149 ~~~v~~l~~~l~~~~ 163 (165)
T 2wji_A 149 KMGIEELKKAISIAV 163 (165)
T ss_dssp TBSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHh
Confidence 99999999998865
No 101
>3gee_A MNME, tRNA modification GTPase MNME; G protein, cytoplasm, GTP- binding, hydrolase, magnesium, metal-binding, nucleotide- binding, potassium; HET: GDP FON; 2.95A {Chlorobium tepidum} PDB: 3gei_A*
Probab=99.85 E-value=1.9e-20 Score=194.84 Aligned_cols=168 Identities=15% Similarity=0.104 Sum_probs=106.3
Q ss_pred hhhhcccCceEEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhh---
Q 010673 275 RKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKI--- 349 (504)
Q Consensus 275 ~~~~~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~--- 349 (504)
.+.++..++.++|+|+|.+|||||||+|+|++.+... .+.+|+.+ +....+.++ | ..+.+||++|.......
T Consensus 224 ~~~~~~~r~~~kV~ivG~~nvGKSSLln~L~~~~~a~vs~~~gtT~d-~~~~~i~~~-g-~~l~liDT~G~~~~~~~ve~ 300 (476)
T 3gee_A 224 YQHGRIVSEGVSTVIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRD-YIEECFIHD-K-TMFRLTDTAGLREAGEEIEH 300 (476)
T ss_dssp HHHHHHHHHCEEEEEECCTTSSHHHHHHHCC-------------------CEEEEET-T-EEEEEEC-------------
T ss_pred HHhhHhhcCCCEEEEECCCCCCHHHHHHHHhCCCCcccCCCCCceEE-EEEEEEEEC-C-eEEEEEECCCCCcchhHHHH
Confidence 3445556788999999999999999999999986543 23344444 444456666 4 56788999998554322
Q ss_pred ---hhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC
Q 010673 350 ---LSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE 426 (504)
Q Consensus 350 ---~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~ 426 (504)
..+..++..+|++++|+|++++.++..+..+...+.. ..++|+++|+||+|+....... .+++.+. +..
T Consensus 301 ~gi~~~~~~~~~aD~vl~VvD~s~~~s~~~~~~~~~~l~~-----l~~~piIvV~NK~Dl~~~~~~~--~~~l~~~-~~~ 372 (476)
T 3gee_A 301 EGIRRSRMKMAEADLILYLLDLGTERLDDELTEIRELKAA-----HPAAKFLTVANKLDRAANADAL--IRAIADG-TGT 372 (476)
T ss_dssp -------CCCSSCSEEEEEEETTTCSSGGGHHHHHHHHHH-----CTTSEEEEEEECTTSCTTTHHH--HHHHHHH-HTS
T ss_pred HHHHHHHhhcccCCEEEEEEECCCCcchhhhHHHHHHHHh-----cCCCCEEEEEECcCCCCccchh--HHHHHhc-CCC
Confidence 2345678999999999999999888644333333333 2379999999999998755432 2345444 224
Q ss_pred CeEEEeccc-cCHHHHHHHHHHHHh-CCC
Q 010673 427 PPIPVSMKS-KDLNNVFSRIIWAAE-HPH 453 (504)
Q Consensus 427 ~~~~vSak~-~gi~el~~~l~~~~~-~~~ 453 (504)
++++|||++ .|+++++++|.+.+. .+.
T Consensus 373 ~~i~vSAktg~GI~eL~~~i~~~~~~~~~ 401 (476)
T 3gee_A 373 EVIGISALNGDGIDTLKQHMGDLVKNLDK 401 (476)
T ss_dssp CEEECBTTTTBSHHHHHHHHTHHHHSSCC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhhccC
Confidence 599999999 999999999999987 544
No 102
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=99.84 E-value=1.1e-20 Score=174.29 Aligned_cols=162 Identities=14% Similarity=0.077 Sum_probs=114.4
Q ss_pred ccCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEE--EEEEcC-CCcEEEEEEecCChhhHhhhh-hhhhh
Q 010673 280 TERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAV--NVVDQP-GGNKKTLILQEIPEEGVKKIL-SNKEA 355 (504)
Q Consensus 280 ~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~--~~v~~~-~~~~~~li~d~~g~~~~~~~~-~~~~~ 355 (504)
.....+||+|+|.+|||||||++++.+..... +|.+..+.. ....+. +....+.+||++|++.+.... ....+
T Consensus 16 ~~~~~~ki~~vG~~~vGKTsLi~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~~~~~~~ 92 (196)
T 3llu_A 16 FQGSKPRILLMGLRRSGKSSIQKVVFHKMSPN---ETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMI 92 (196)
T ss_dssp ----CCEEEEEESTTSSHHHHHHHHHSCCCGG---GGGGCCCCCSCEEEEECCTTSCCEEEEECCSSCCTTCTTCCHHHH
T ss_pred ccCcceEEEEECCCCCCHHHHHHHHHhcCCCc---ceeeeccccceeeeeccCCCeeEEEEEECCCCHHHHhhhhhcccc
Confidence 35667899999999999999999988754322 222221111 112222 244677889999987765443 11357
Q ss_pred cccccEEEEEEeCCCc--ccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc-------cchH-HHHHHHH----
Q 010673 356 LASCDVTIFVYDSSDE--YSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT-------MAVQ-DSARVTQ---- 421 (504)
Q Consensus 356 ~~~ad~iilV~D~s~~--~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~-------~~~~-~~~~~~~---- 421 (504)
++.+|++|+|||++++ +++..+..|+..+... ..++|+++|+||+|+.... .+.. ..+++++
T Consensus 93 ~~~~~~~i~v~d~~~~~~~~~~~~~~~l~~~~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~v~~~~~~~~~~~~~~ 168 (196)
T 3llu_A 93 FRGTGALIYVIDAQDDYMEALTRLHITVSKAYKV----NPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLE 168 (196)
T ss_dssp HHTCSEEEEEEETTSCCHHHHHHHHHHHHHHHHH----CTTCEEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccCCEEEEEEECCCchHHHHHHHHHHHHHHHhc----CCCCcEEEEEeccccCchhhhhHHHhHHHHHHHHHHHHhhhh
Confidence 8999999999999998 6667777777777544 4589999999999987632 2222 5667777
Q ss_pred HhCCCCeEEEeccccCHHHHHHHHHHHH
Q 010673 422 ELGIEPPIPVSMKSKDLNNVFSRIIWAA 449 (504)
Q Consensus 422 ~~~~~~~~~vSak~~gi~el~~~l~~~~ 449 (504)
.++++ +++|||++.||+++|+.|++.+
T Consensus 169 ~~~~~-~~e~Sa~~~~v~~~f~~l~~~l 195 (196)
T 3llu_A 169 KLHLS-FYLTSIYDHSIFEAFSKVVQKL 195 (196)
T ss_dssp TSCEE-EEEECTTSTHHHHHHHHHHHHT
T ss_pred cCCcc-eEEEEechhhHHHHHHHHHHHh
Confidence 55665 8999999999999999998865
No 103
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=99.83 E-value=4.8e-20 Score=169.28 Aligned_cols=162 Identities=20% Similarity=0.330 Sum_probs=133.7
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDV 361 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ 361 (504)
...++|+|+|++|||||||+++|++..+...+.+|++.++....+.+++......+||++|.+.+..+. ..+++.+++
T Consensus 27 ~~~~kv~lvG~~g~GKSTLl~~l~~~~~~~~~~~t~~~~~~~~~i~~~g~~~~~~i~Dt~g~~~~~~~~--~~~~~~~~~ 104 (191)
T 1oix_A 27 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAIT--SAYYRGAVG 104 (191)
T ss_dssp SEEEEEEEEECTTSSHHHHHHHHHHSCCCCSCCCCCSEEEEEEEEEETTEEEEEEEEEECSCCSSSCCC--HHHHTTCCE
T ss_pred CcceEEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceEEEEEEEEECCEEEEEEEEECCCCcchhhhh--HHHhhcCCE
Confidence 457899999999999999999999999888888898888877788888333345578888886665554 456788999
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-cCHH
Q 010673 362 TIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-KDLN 439 (504)
Q Consensus 362 iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-~gi~ 439 (504)
+++|||+++..+++.+..|+..+.... ..+.|+++|+||+|+...... ...+..++...++. ++++||++ .|++
T Consensus 105 ~i~v~d~~~~~s~~~~~~~~~~~~~~~---~~~~~i~~v~nK~Dl~~~~~~~~~~a~~l~~~~~~~-~ld~Sald~~~v~ 180 (191)
T 1oix_A 105 ALLVYDIAKHLTYENVERWLKELRDHA---DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLS-FIETSALDSTNVE 180 (191)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHS---CTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCE-EEECCTTTCTTHH
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhc---CCCCcEEEEEECcccccccccCHHHHHHHHHHcCCE-EEEEeCCCCCCHH
Confidence 999999999999998888888776542 347899999999999764443 34788899998886 89999999 9999
Q ss_pred HHHHHHHHHH
Q 010673 440 NVFSRIIWAA 449 (504)
Q Consensus 440 el~~~l~~~~ 449 (504)
++++.|.+.+
T Consensus 181 ~l~~~l~~~i 190 (191)
T 1oix_A 181 AAFQTILTEI 190 (191)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 104
>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}
Probab=99.83 E-value=2e-21 Score=186.94 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=113.1
Q ss_pred ccCceEEEEEEcCC---------CchhhHHHHHHhc---CCCCCCCCCCc-cceEEEEEEE--------------cCCCc
Q 010673 280 TERNVFRCLLFGPQ---------NAGKSALLNSFLE---RPFSENYAPTT-GEQYAVNVVD--------------QPGGN 332 (504)
Q Consensus 280 ~~~~~~kI~vvG~~---------~vGKSSLin~l~~---~~~~~~~~~T~-~~~~~~~~v~--------------~~~~~ 332 (504)
.....+||+|+|.+ |||||||+++|++ ..+...+.+|+ +..+..+.+. +++..
T Consensus 15 ~~~~~~ki~lvG~~~~~~~~~~~~vGKSsLi~~l~~~~~~~~~~~~~~t~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (255)
T 3c5h_A 15 YFQGTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDHFLYWGEVSRSLEDCVE 94 (255)
T ss_dssp SCCSCEEEEEEESCCCTTTTTTCCCSHHHHHHHHHCCSTTTCCSCCCCEECHHHHTSTTTTTCSEEEEEEEC--------
T ss_pred CCCceeEEEEECCCccccccCCCCcCHHHHHHHHHhccCCccccccCCcccccccceeEeecccccccccccccccCCcE
Confidence 35667999999999 9999999999999 55555565654 3322211111 23233
Q ss_pred EEEEEEe-----------------------cCChhhHhhhhhhhhhcc---------------------cccEEEEEEeC
Q 010673 333 KKTLILQ-----------------------EIPEEGVKKILSNKEALA---------------------SCDVTIFVYDS 368 (504)
Q Consensus 333 ~~~li~d-----------------------~~g~~~~~~~~~~~~~~~---------------------~ad~iilV~D~ 368 (504)
..+.+|| +.|++.+..++ ..++. +||++|+|||+
T Consensus 95 ~~l~i~D~~~~~D~~~~~~~~~~~~~~~~~~~g~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vilV~D~ 172 (255)
T 3c5h_A 95 CKMHIVEQTEFIDDQTFQPHRSTALQPYIKRAAATKLASAE--KLMYFCTDQLGLEQDFEQKQMPDGKLLVDGFLLGIDV 172 (255)
T ss_dssp -CEEEEEECCCEETTTCSBTTGGGCCCHHHHHTCSEEECTT--CBCCCCGGGTTCGGGSCCCBCGGGEEECCEEEEEEEC
T ss_pred EEEEEEEccccccccccccccccccccccccchhhhhhhhh--hhhhhccccccccccccccccccccccCCEEEEEEEC
Confidence 4456777 22222222222 12333 79999999999
Q ss_pred CCc--ccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHh-CCCCeEEEeccc-cCHHHHHHH
Q 010673 369 SDE--YSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQEL-GIEPPIPVSMKS-KDLNNVFSR 444 (504)
Q Consensus 369 s~~--~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~-~~~~~~~vSak~-~gi~el~~~ 444 (504)
+++ .||+.+..|+..+..... ..++|+++|+||+|+...+.. ++.++++... +++ ++++||++ .|++++|++
T Consensus 173 t~~~~~s~~~~~~~l~~i~~~~~--~~~~piilV~NK~Dl~~~~~v-~~~~~~~~~~~~~~-~~e~SAk~g~gv~elf~~ 248 (255)
T 3c5h_A 173 SRGMNRNFDDQLKFVSNLYNQLA--KTKKPIVVVLTKCDEGVERYI-RDAHTFALSKKNLQ-VVETSARSNVNVDLAFST 248 (255)
T ss_dssp BC----CHHHHHHHHHHHHHHHH--HTTCCEEEEEECGGGBCHHHH-HHHHHHHHTSSSCC-EEECBTTTTBSHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHhc--cCCCCEEEEEEcccccccHHH-HHHHHHHHhcCCCe-EEEEECCCCCCHHHHHHH
Confidence 998 999999999998875411 247999999999999764443 4667777764 665 99999999 999999999
Q ss_pred HHHHHh
Q 010673 445 IIWAAE 450 (504)
Q Consensus 445 l~~~~~ 450 (504)
|.+.+.
T Consensus 249 l~~~l~ 254 (255)
T 3c5h_A 249 LVQLID 254 (255)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998763
No 105
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=99.83 E-value=7e-20 Score=170.98 Aligned_cols=162 Identities=18% Similarity=0.192 Sum_probs=111.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCC-cEEEEEEecCChhhHhh-hhhhhhhcccc
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGG-NKKTLILQEIPEEGVKK-ILSNKEALASC 359 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~-~~~~li~d~~g~~~~~~-~~~~~~~~~~a 359 (504)
+..+||+|+|++|||||||+++|++..+...+.++. ..+. .+.+++. ...+.+||++|++.+.. ++ ..+++.+
T Consensus 5 ~~~~ki~vvG~~~~GKTsli~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~i~Dt~G~~~~~~~~~--~~~~~~~ 79 (214)
T 2fh5_B 5 SSQRAVLFVGLCDSGKTLLFVRLLTGQYRDTQTSIT-DSSA--IYKVNNNRGNSLTLIDLPGHESLRFQLL--DRFKSSA 79 (214)
T ss_dssp ---CEEEEECSTTSSHHHHHHHHHHSCCCCBCCCCS-CEEE--EEECSSTTCCEEEEEECCCCHHHHHHHH--HHHGGGE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCcccccCCcc-eeeE--EEEecCCCccEEEEEECCCChhHHHHHH--HHHHhhC
Confidence 456899999999999999999999998877775444 3333 2666633 46788999999988766 54 4578999
Q ss_pred cEEEEEEeCCCcc-cHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHh---------------
Q 010673 360 DVTIFVYDSSDEY-SWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQEL--------------- 423 (504)
Q Consensus 360 d~iilV~D~s~~~-s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~--------------- 423 (504)
|++|+|||+++.. ++..+..++..+.........++|+++|+||+|+..........+.+.+.+
T Consensus 80 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~l~~~l~~~~~~~~~~~s~~~ 159 (214)
T 2fh5_B 80 RAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLD 159 (214)
T ss_dssp EEEEEEEETTTHHHHHHHHHHHHHHHHHHHHTSTTCCEEEEEEECTTSTTCCCHHHHHHHHHHHHHHHHHHCC-------
T ss_pred CEEEEEEECCCcCHHHHHHHHHHHHHHhhhhhcccCCCEEEEEECCCCCCcccHHHHHHHHHHHHHHHhccchhcccccc
Confidence 9999999999853 455555544443222111134789999999999987654333222222211
Q ss_pred -----------------------CCCCeEEEecccc-------CHHHHHHHHHHHH
Q 010673 424 -----------------------GIEPPIPVSMKSK-------DLNNVFSRIIWAA 449 (504)
Q Consensus 424 -----------------------~~~~~~~vSak~~-------gi~el~~~l~~~~ 449 (504)
++ ++++|||++. ||+++|++|.+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~SAk~g~~~~~~~gv~~lf~~l~~~~ 214 (214)
T 2fh5_B 160 SSSTAPAQLGKKGKEFEFSQLPLKV-EFLECSAKGGRGDTGSADIQDLEKWLAKIA 214 (214)
T ss_dssp -----CCCSSCTTSCCCGGGSSSCE-EEEECBCC-------CCBCHHHHHHHHHHC
T ss_pred CCccccccccCCCCCcccccCCCcE-EEEEeeccCCCccccccChHHHHHHHHHhC
Confidence 22 3899999985 8999999998753
No 106
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.83 E-value=7.7e-20 Score=182.29 Aligned_cols=158 Identities=21% Similarity=0.241 Sum_probs=119.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
.+..+||+|+|.+|||||||+++|++..+.... ||.+..+ ..+... ...+.+||++|++.+..+. ..+++.+|
T Consensus 162 ~~~~~kI~ivG~~~vGKSsLl~~l~~~~~~~~~-pT~~~~~--~~~~~~--~~~l~i~Dt~G~~~~~~~~--~~~~~~ad 234 (329)
T 3o47_A 162 GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNV--ETVEYK--NISFTVWDVGGQDKIRPLW--RHYFQNTQ 234 (329)
T ss_dssp -CCSEEEEEEESTTSSHHHHHHHTCSSCCEEEE-EETTEEE--EEEEET--TEEEEEEECC-----CCSH--HHHHTTEE
T ss_pred ccCcceEEEECCCCccHHHHHHHHhCCCCCCcc-cccceEE--EEEecC--cEEEEEEECCCCHhHHHHH--HHHhccCC
Confidence 456789999999999999999999998875443 5665433 334444 3678899999998877765 55889999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC-------CeEEEec
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE-------PPIPVSM 433 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~-------~~~~vSa 433 (504)
++|+|||++++.+|..+..|+..+..... ..++|+++|+||+|+...... +++...++.. ++++|||
T Consensus 235 ~vilV~D~~~~~s~~~~~~~~~~~~~~~~--~~~~piilV~NK~Dl~~~~~~----~~i~~~~~~~~~~~~~~~~~~vSA 308 (329)
T 3o47_A 235 GLIFVVDSNDRERVNEAREELMRMLAEDE--LRDAVLLVFANKQDLPNAMNA----AEITDKLGLHSLRHRNWYIQATCA 308 (329)
T ss_dssp EEEEEEETTCSSSHHHHHHHHHHHHTCGG--GTTCEEEEEEECTTSTTCCCH----HHHHHHHTCTTCCSSCEEEEECBT
T ss_pred EEEEEEECCchHHHHHHHHHHHHHHhhhc--cCCCeEEEEEECccCCcccCH----HHHHHHhchhhhhcCCCEEEEEEC
Confidence 99999999999999999888887765421 358999999999999875432 3344444432 3799999
Q ss_pred cc-cCHHHHHHHHHHHHhC
Q 010673 434 KS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~~ 451 (504)
++ .||+++|+.|.+.+..
T Consensus 309 k~g~gi~el~~~l~~~l~~ 327 (329)
T 3o47_A 309 TSGDGLYEGLDWLSNQLRN 327 (329)
T ss_dssp TTTBTHHHHHHHHHHHHTC
T ss_pred CCCcCHHHHHHHHHHHHHh
Confidence 99 9999999999998754
No 107
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=99.82 E-value=2.6e-19 Score=176.82 Aligned_cols=178 Identities=20% Similarity=0.205 Sum_probs=131.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCC--CCCccceEEEEEEEcCCCcEEEEEEecCChhhHh-------hh-h
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENY--APTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK-------KI-L 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~-------~~-~ 350 (504)
....-.|+|+|.+|||||||+|+|++..+.... ..|+...... .+..+ ....+.+||++|..... .+ .
T Consensus 7 ~~~~g~v~ivG~~nvGKSTLin~l~g~~~~i~s~~~~tT~~~~~~-~~~~~-~~~~i~lvDTPG~~~~~~~~~l~~~~~~ 84 (308)
T 3iev_A 7 HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLG-VKNIP-NEAQIIFLDTPGIYEPKKSDVLGHSMVE 84 (308)
T ss_dssp CCEEEEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEE-EEEET-TTEEEEEEECCCCCCCCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCCCcHHHHHHHHhCCCccccCCCCCceeeEEEE-EEecC-CCCeEEEEECcCCCccccchhHHHHHHH
Confidence 456678999999999999999999999886543 3355443222 23332 25788899999973321 11 1
Q ss_pred hhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCC-CCccchHHHHHHHHHhC-CCCe
Q 010673 351 SNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLK-PYTMAVQDSARVTQELG-IEPP 428 (504)
Q Consensus 351 ~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~-~~~~~~~~~~~~~~~~~-~~~~ 428 (504)
....++..+|++++|+|++++.++.+...|+..+... ++|+++|+||+|+. ...........+.+.++ ..++
T Consensus 85 ~~~~~l~~aD~il~VvD~~~~~~~~~~~~~~~~l~~~------~~pvilV~NK~Dl~~~~~~~~~~~~~l~~~~~~~~~i 158 (308)
T 3iev_A 85 IAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPL------NKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEI 158 (308)
T ss_dssp HHHHHHHHCSEEEEEEETTTBSCHHHHHHHHHHTGGG------CCCEEEEEECGGGSSSGGGGHHHHHHHHHHCTTCCCE
T ss_pred HHHHHhhcCCEEEEEEeCCCCCCchhHHHHHHHHHhc------CCCEEEEEECccCCCCHHHHHHHHHHHHHhccCCCeE
Confidence 1256788999999999999999998877778777653 79999999999998 44444557788888884 4469
Q ss_pred EEEeccc-cCHHHHHHHHHHHHhCC-CCCCCCcccccchh
Q 010673 429 IPVSMKS-KDLNNVFSRIIWAAEHP-HLNIPETETGRNRK 466 (504)
Q Consensus 429 ~~vSak~-~gi~el~~~l~~~~~~~-~~~~~~~~~~~~~~ 466 (504)
+++||++ .|++++++.|.+.+... ..+.++...+.+.+
T Consensus 159 ~~vSA~~g~gv~~L~~~l~~~l~~~~~~~~~~~~td~~~~ 198 (308)
T 3iev_A 159 VPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLR 198 (308)
T ss_dssp EECBTTTTBSHHHHHHHHHHHSCBCCCSSCTTCCBCCCHH
T ss_pred EEEeCCCCCCHHHHHHHHHHhCccCCCCCCcccccCCCHH
Confidence 9999999 99999999999988543 34444444445444
No 108
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=99.82 E-value=1.1e-19 Score=171.60 Aligned_cols=160 Identities=14% Similarity=0.065 Sum_probs=114.1
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCCh------hh----Hhhhhh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE------EG----VKKILS 351 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~------~~----~~~~~~ 351 (504)
...++|+|+|.+|||||||+|+|++..+.....+.+........+... ...+.+||++|. +. +..+
T Consensus 27 ~~~~kI~vvG~~~vGKSsLin~l~~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~l~DtpG~~~~~~~~~~~~~~~~~-- 102 (228)
T 2qu8_A 27 PHKKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHFDHK--LNKYQIIDTPGLLDRAFENRNTIEMTTI-- 102 (228)
T ss_dssp TTSEEEEEECSTTSSHHHHHHHHTTTCEEEECC-----CEEEEEEEET--TEEEEEEECTTTTTSCGGGCCHHHHHHH--
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCccCCCCCcceeeeeeeeecC--CCeEEEEECCCCcCcccchhhhHHHHHH--
Confidence 467999999999999999999999988753332322222344444444 266788999998 22 1112
Q ss_pred hhhhcccccEEEEEEeCCCcccHH--HHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH----HHHHHHHHhC-
Q 010673 352 NKEALASCDVTIFVYDSSDEYSWK--RTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ----DSARVTQELG- 424 (504)
Q Consensus 352 ~~~~~~~ad~iilV~D~s~~~s~~--~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~----~~~~~~~~~~- 424 (504)
..++..+|++|+|||++++.+|. ....|+..+... ..++|+++|+||+|+...+.... ...+++...+
T Consensus 103 -~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~l~~~----~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 177 (228)
T 2qu8_A 103 -TALAHINGVILFIIDISEQCGLTIKEQINLFYSIKSV----FSNKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKN 177 (228)
T ss_dssp -HHHHTSSEEEEEEEETTCTTSSCHHHHHHHHHHHHTC----C-CCCEEEEEECGGGCC--CCCHHHHHHHHHHHHHCCS
T ss_pred -HHhhccccEEEEEEecccccCcchHHHHHHHHHHHHh----hcCCcEEEEEeCcccCCchhhHHHHHHHHHHHHHhcCC
Confidence 23467899999999999998864 234566666543 34899999999999987655432 4667777776
Q ss_pred -CCCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 425 -IEPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 425 -~~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
.+ +++|||++ .||+++|++|.+.+..
T Consensus 178 ~~~-~~~~SA~~g~gi~~l~~~l~~~i~~ 205 (228)
T 2qu8_A 178 PIK-FSSFSTLTGVGVEQAKITACELLKN 205 (228)
T ss_dssp CEE-EEECCTTTCTTHHHHHHHHHHHHHH
T ss_pred Cce-EEEEecccCCCHHHHHHHHHHHHHH
Confidence 54 89999999 9999999999998743
No 109
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=99.82 E-value=5.4e-20 Score=166.13 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=115.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
..+.++|+|+|.+|||||||+++|++..+...+.+++...+....+.++ + ..+.+||++|++.+..++ ..++..+|
T Consensus 5 ~~~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~Dt~G~~~~~~~~--~~~~~~~d 80 (178)
T 2lkc_A 5 VERPPVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVN-D-KKITFLDTPGHEAFTTMR--ARGAQVTD 80 (178)
T ss_dssp CCCCCEEEEESCTTTTHHHHHHHHHTTCSSCSSCCSSSTTCCCCEEEET-T-EEEEESCCCSSSSSSCSC--CSSCCCCC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHhCCccccCCCCceeEeeeEEEEEeC-C-ceEEEEECCCCHHHHHHH--HHHHhhCC
Confidence 4567899999999999999999999998877666655544544456666 3 456789999987776665 45788999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCC--------CCeEEEe
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGI--------EPPIPVS 432 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~--------~~~~~vS 432 (504)
++++|||++++...... .++..+.. .++|+++|+||+|+.... ...........+. .+++++|
T Consensus 81 ~~i~v~d~~~~~~~~~~-~~l~~~~~------~~~p~ilv~nK~Dl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~S 151 (178)
T 2lkc_A 81 IVILVVAADDGVMPQTV-EAINHAKA------ANVPIIVAINKMDKPEAN--PDRVMQELMEYNLVPEEWGGDTIFCKLS 151 (178)
T ss_dssp EEEEEEETTCCCCHHHH-HHHHHHGG------GSCCEEEEEETTTSSCSC--HHHHHHHHTTTTCCBTTTTSSEEEEECC
T ss_pred EEEEEEECCCCCcHHHH-HHHHHHHh------CCCCEEEEEECccCCcCC--HHHHHHHHHhcCcChhHcCCcccEEEEe
Confidence 99999999986443332 22333322 378999999999997642 1222222222221 1489999
Q ss_pred ccc-cCHHHHHHHHHHHHhCCC
Q 010673 433 MKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 433 ak~-~gi~el~~~l~~~~~~~~ 453 (504)
|++ .|+++++++|.+.+...+
T Consensus 152 a~~~~gv~~l~~~l~~~~~~~~ 173 (178)
T 2lkc_A 152 AKTKEGLDHLLEMILLVSEMEE 173 (178)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHhhhhhc
Confidence 999 999999999999876543
No 110
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=99.82 E-value=1.8e-19 Score=165.39 Aligned_cols=157 Identities=18% Similarity=0.217 Sum_probs=106.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCC----------hhhHhhhhh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP----------EEGVKKILS 351 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g----------~~~~~~~~~ 351 (504)
.+.++|+|+|.+|||||||+|+|++..+...+.++.+.+.......++ + .+.+||++| .+.+..+.
T Consensus 21 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~t~~~~~~~~~-~--~~~l~Dt~G~~~~~~~~~~~~~~~~~~- 96 (195)
T 1svi_A 21 GGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN-D--ELHFVDVPGYGFAKVSKSEREAWGRMI- 96 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHTC-------------CCEEEEEET-T--TEEEEECCCBCCCSSCHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCccccCCCCCceeeEEEEEEC-C--cEEEEECCCCCccccCHHHHHHHHHHH-
Confidence 467999999999999999999999987655444444433333334444 3 467899999 55555544
Q ss_pred hhhhcccc---cEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCC---
Q 010673 352 NKEALASC---DVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGI--- 425 (504)
Q Consensus 352 ~~~~~~~a---d~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~--- 425 (504)
..+++.+ |++++|+|++++.++.... ++..+... +.|+++|+||+|+....+.....+++.+.+..
T Consensus 97 -~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~------~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 168 (195)
T 1svi_A 97 -ETYITTREELKAVVQIVDLRHAPSNDDVQ-MYEFLKYY------GIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPE 168 (195)
T ss_dssp -HHHHHHCTTEEEEEEEEETTSCCCHHHHH-HHHHHHHT------TCCEEEEEECGGGSCGGGHHHHHHHHHHHHTCCTT
T ss_pred -HHHHhhhhcCCEEEEEEECCCCCCHHHHH-HHHHHHHc------CCCEEEEEECcccCChHHHHHHHHHHHHHHcccCC
Confidence 3355555 9999999999998887632 33334332 78999999999998766554444455544432
Q ss_pred CCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 426 EPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 426 ~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
.+++++||++ .|+++++++|.+.+.
T Consensus 169 ~~~~~~Sa~~~~gv~~l~~~l~~~l~ 194 (195)
T 1svi_A 169 DELILFSSETKKGKDEAWGAIKKMIN 194 (195)
T ss_dssp SEEEECCTTTCTTHHHHHHHHHHHHT
T ss_pred CceEEEEccCCCCHHHHHHHHHHHhc
Confidence 2489999999 999999999998764
No 111
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.82 E-value=2.3e-21 Score=172.76 Aligned_cols=145 Identities=15% Similarity=0.246 Sum_probs=118.4
Q ss_pred CcchHHHHHHHHHhHhhhcC--CCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDH--DMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~--d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
.+||++++++||+||.+||. |+||.|+.+||..+++ .+|.++|++++..|+.. +. .+++.|+|++|+.++.
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr-~lG~~~t~~el~~~~~~-d~-----~~~g~i~f~eFl~~~~ 73 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLR-CLGMNPTEAQVHQHGGT-KK-----MGEKAYKLEEILPIYE 73 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHH-HTTCCCCHHHHHTTTCC-SS-----TTSCEECHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHH-HcCCCCCHHHHHHHHcc-cc-----cCCCcccHHHHHHHHH
Confidence 37999999999999999995 8999999999999977 67999999999987532 11 1366699999999887
Q ss_pred HHHhc---CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcC--CCCCCCCHHHH
Q 010673 127 LFIEK---GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDI--DNDGAVRPAEL 199 (504)
Q Consensus 127 ~~~~~---~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~--d~dG~l~~~e~ 199 (504)
..... ...++++++|+.||.|++|+|+.++| . .+ ..++.... +++.+||+.+|. |+||.|+|+||
T Consensus 74 ~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~-~l-------~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF 145 (159)
T 3i5g_C 74 EMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRN-VL-------KMLGERITEDQCNDIFTFCDIREDIDGNIKYEDL 145 (159)
T ss_dssp HHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHH-HH-------HHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHH
T ss_pred HhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHH
Confidence 66553 23467999999999999999999999 6 33 23443333 778999999994 89999999999
Q ss_pred hhhhccCCC
Q 010673 200 EDLFLTAPE 208 (504)
Q Consensus 200 ~~l~~~~p~ 208 (504)
.+++...|.
T Consensus 146 ~~~m~~~p~ 154 (159)
T 3i5g_C 146 MKKVMAGPF 154 (159)
T ss_dssp HHHHHHCSC
T ss_pred HHHHHCCCC
Confidence 988876654
No 112
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=99.82 E-value=1.6e-19 Score=178.43 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=122.1
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCC---CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhH-----hhhhhhhh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSE---NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV-----KKILSNKE 354 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~---~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~-----~~~~~~~~ 354 (504)
..+||+++|++|||||||+++|+++.... .+.+|.+..+. .+.+. +...+.+||++|++.+ ..+. ..
T Consensus 2 ~~~KI~lvG~~~vGKSSLi~~l~~~~~~~~~~~~~~Ti~~~~~--~~~~~-~~~~l~i~Dt~G~~~~~~~~~~~~~--~~ 76 (307)
T 3r7w_A 2 LGSKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFL-GNMTLNLWDCGGQDVFMENYFTKQK--DH 76 (307)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHSCCCTGGGGGCCCCCSEEEE--EEEET-TTEEEEEEEECCSHHHHHHHHTTTH--HH
T ss_pred CceEEEEECCCCCCHHHHHHHHHhCCCCccccCcCCccceEEE--EEEeC-CceEEEEEECCCcHHHhhhhhhhHH--HH
Confidence 46899999999999999999999874432 23456665443 35555 4578889999999776 3333 56
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCC--Ccc----c-hHHHHHHHHHhCC--
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKP--YTM----A-VQDSARVTQELGI-- 425 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~--~~~----~-~~~~~~~~~~~~~-- 425 (504)
+++++|++|+|||++++.+++.+..|...+...... .+++|+++|+||+|+.. .+. . .+++.++++.+|+
T Consensus 77 ~~~~ad~vi~V~D~t~~~s~~~l~~~~~~l~~l~~~-~~~~piilv~NK~Dl~~~~~r~~~~~v~~~~~~~~~~~~g~~~ 155 (307)
T 3r7w_A 77 IFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY-SPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPN 155 (307)
T ss_dssp HHTTCSEEEEEEETTCSCHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred HhccCCEEEEEEECCChhhHHHHHHHHHHHHHHHHh-CCCCeEEEEEecccccchhhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999999999987775544332110 45899999999999987 332 2 2478889999984
Q ss_pred CCeEEEeccccCHHHHHHHHHHHH
Q 010673 426 EPPIPVSMKSKDLNNVFSRIIWAA 449 (504)
Q Consensus 426 ~~~~~vSak~~gi~el~~~l~~~~ 449 (504)
.+++++||++.|+.++|..+++.+
T Consensus 156 ~~~~~tSa~~~~i~e~~~~iv~~l 179 (307)
T 3r7w_A 156 LIGFPTSIWDESLYKAWSQIVCSL 179 (307)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHTT
T ss_pred eEEEEeeecCChHHHHHHHHHHHH
Confidence 358999999988888888887754
No 113
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.82 E-value=4.7e-21 Score=168.45 Aligned_cols=142 Identities=17% Similarity=0.191 Sum_probs=121.3
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
+||++++++|+++|..||+|+||.|+.+||..+++ .+|.+++++++..++..++.+ ++|.+++++|+..+....
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~-~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~ef~~~~~~~~ 76 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMR-TLGQNPTEAELQDLIAEAENN-----NNGQLNFTEFCGIMAKQM 76 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHH-HHTCCCCHHHHHHHHHHHHTT-----STTEEEHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHH-hcCCCchHHHHHHHHHhcccC-----CCCcccHHHHHHHHHHHh
Confidence 58999999999999999999999999999999977 469999999999999999877 466799999998776655
Q ss_pred hcC-CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 130 EKG-RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 130 ~~~-~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
... ..++++.+|+.||.|++|+|+.++| . .+ ..++.... .++.++|+.+|.|+||.|+++||.++++.
T Consensus 77 ~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~-~l-------~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 77 RETDTEEEMREAFKIFDRDGDGFISPAELRF-VM-------INLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTTTTHHHHHHHHHHHHSSCSSEECHHHHHH-HH-------HHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred cccCcHHHHHHHHHHHCCCCcCcCcHHHHHH-HH-------HHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 433 4467999999999999999999998 6 33 23333332 77899999999999999999999998863
No 114
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.81 E-value=1.1e-20 Score=188.65 Aligned_cols=148 Identities=20% Similarity=0.255 Sum_probs=123.7
Q ss_pred cccccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHH
Q 010673 44 FDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF 123 (504)
Q Consensus 44 ~~~~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~ 123 (504)
|.+...+|+++++++|+++|+.||+|+||.|+.+||..+++ .+|..++++|++.|++.+|.+ ++|.|+|++|+.
T Consensus 289 wePs~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLr-sLG~~~TeeEI~~Lf~~~D~D-----gDG~IdFeEFl~ 362 (440)
T 3u0k_A 289 WEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDAD-----GDGTIDFPEFLI 362 (440)
T ss_dssp ECCBCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSS-----CSSSEEHHHHHH
T ss_pred hHhhHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHH
Confidence 55667899999999999999999999999999999999987 579999999999999999887 577799999998
Q ss_pred HHHHHHh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHh
Q 010673 124 LHALFIE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELE 200 (504)
Q Consensus 124 l~~~~~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~ 200 (504)
++...+. ....++++++|+.||.|++|.|+.++| . .+ ..++... .+++.+||+.+|.|+||.|+++||.
T Consensus 363 lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~-vL-------~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFv 434 (440)
T 3u0k_A 363 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH-VM-------TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 434 (440)
T ss_dssp HHHTC------CHHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred HHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 8765443 345678999999999999999999999 6 33 1233222 2778999999999999999999999
Q ss_pred hhhcc
Q 010673 201 DLFLT 205 (504)
Q Consensus 201 ~l~~~ 205 (504)
+++..
T Consensus 435 kmMtS 439 (440)
T 3u0k_A 435 QMMTA 439 (440)
T ss_dssp HHHC-
T ss_pred HHhCC
Confidence 98853
No 115
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=99.81 E-value=1.6e-19 Score=160.11 Aligned_cols=150 Identities=23% Similarity=0.298 Sum_probs=104.5
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCCC-CCCCccceEEEEEEEcCCCcEEEEEEecCChhhH-------hhhhhhhhhc
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSEN-YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV-------KKILSNKEAL 356 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~~-~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~-------~~~~~~~~~~ 356 (504)
+||+++|++|||||||+++|.+..+... ..+++........+..+ + ..+.+||++|.... .... ..++
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~Dt~G~~~~~~~~~~~~~~~--~~~~ 77 (161)
T 2dyk_A 2 HKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETD-R-GRFLLVDTGGLWSGDKWEKKIQEKV--DRAL 77 (161)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHCCC-----------CCEEEEEEET-T-EEEEEEECGGGCSSSSCCHHHHHHH--HHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCeeeccCCCCceecceEEEEEeC-C-ceEEEEECCCCCCccchHHHHHHHH--HHHH
Confidence 6899999999999999999999875422 22222223344456665 3 46778999988651 2222 4578
Q ss_pred ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-
Q 010673 357 ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 357 ~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~- 435 (504)
+.+|++++|+|++++.+... ..+...+... +.|+++|+||+|+.... +...+++ +++..+++++||++
T Consensus 78 ~~~~~~i~v~d~~~~~~~~~-~~~~~~~~~~------~~p~ilv~nK~Dl~~~~---~~~~~~~-~~~~~~~~~~Sa~~~ 146 (161)
T 2dyk_A 78 EDAEVVLFAVDGRAELTQAD-YEVAEYLRRK------GKPVILVATKVDDPKHE---LYLGPLY-GLGFGDPIPTSSEHA 146 (161)
T ss_dssp TTCSEEEEEEESSSCCCHHH-HHHHHHHHHH------TCCEEEEEECCCSGGGG---GGCGGGG-GGSSCSCEECBTTTT
T ss_pred HhCCEEEEEEECCCcccHhH-HHHHHHHHhc------CCCEEEEEECcccccch---HhHHHHH-hCCCCCeEEEecccC
Confidence 89999999999999766543 2223333322 78999999999997643 2344455 67775699999999
Q ss_pred cCHHHHHHHHHHHH
Q 010673 436 KDLNNVFSRIIWAA 449 (504)
Q Consensus 436 ~gi~el~~~l~~~~ 449 (504)
.|++++|++|.+.+
T Consensus 147 ~gv~~l~~~l~~~l 160 (161)
T 2dyk_A 147 RGLEELLEAIWERL 160 (161)
T ss_dssp BSHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHhC
Confidence 99999999998764
No 116
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.81 E-value=7.6e-21 Score=168.25 Aligned_cols=141 Identities=15% Similarity=0.193 Sum_probs=118.2
Q ss_pred ccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 47 DEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 47 ~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+..+||++++++|+++|..||+|+||.|+.+||..+++ .+|.+++++++..++... ++.|+|++|+.++.
T Consensus 6 ~~~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~-~lg~~~~~~~~~~~~~~~---------~~~i~f~ef~~~~~ 75 (153)
T 3i5g_B 6 RRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFS-SLGRVPPDDELNAMLKEC---------PGQLNFTAFLTLFG 75 (153)
T ss_dssp -CTTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHH-HTTSCCCHHHHHHHHHTS---------SSCCCSHHHHHTTT
T ss_pred cccCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH-HcCCCccHHHHHHHHHhc---------cCCccHHHHHHHHH
Confidence 45679999999999999999999999999999999977 579999999999887543 55699999998876
Q ss_pred HHHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhh
Q 010673 127 LFIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLF 203 (504)
Q Consensus 127 ~~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~ 203 (504)
..... ...++++.+|+.||.|++|+|+.++| . .+ ..++.... +++.+||+.+|.+ ||.|+|+||.+|+
T Consensus 76 ~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~-~l-------~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m 146 (153)
T 3i5g_B 76 EKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKD-LL-------ENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIK 146 (153)
T ss_dssp TTTTTCCCHHHHHHHHHTTCSSCSSCCCHHHHHH-HH-------HSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHH
T ss_pred hhhcccccHHHHHHHHhccccCCCCeEeHHHHHH-HH-------HHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHh
Confidence 55543 34568999999999999999999999 6 33 23343333 7789999999988 9999999999998
Q ss_pred ccC
Q 010673 204 LTA 206 (504)
Q Consensus 204 ~~~ 206 (504)
...
T Consensus 147 ~~~ 149 (153)
T 3i5g_B 147 GKA 149 (153)
T ss_dssp HCS
T ss_pred cCC
Confidence 754
No 117
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=99.81 E-value=9.3e-20 Score=166.29 Aligned_cols=157 Identities=18% Similarity=0.236 Sum_probs=119.9
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHh------hhhhhhhhc
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK------KILSNKEAL 356 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~------~~~~~~~~~ 356 (504)
..++|+++|++|||||||+++|++..+.....+++........+.++ + ..+.+||++|.+.+. .+. ..++
T Consensus 6 ~~~~i~lvG~~gvGKStL~~~l~~~~~~~~~~~~~t~~~~~~~~~~~-~-~~~~l~Dt~G~~~~~~~~~~~~~~--~~~~ 81 (188)
T 2wjg_A 6 KSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYN-G-EKFKVVDLPGVYSLTANSIDEIIA--RDYI 81 (188)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHTTCEEEEECTTSCCEEEEEEEEET-T-EEEEEEECCCCSCCSSSSHHHHHH--HHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCccccCCCCeeccceEEEEEeC-C-cEEEEEECCCcCccccccHHHHHH--HHHH
Confidence 56899999999999999999999977654444555544555556665 3 677889999986542 222 2344
Q ss_pred --ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEecc
Q 010673 357 --ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 357 --~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak 434 (504)
..+|++++|+|.++ ++....|+..+... +.|+++|+||+|+..........+++++.++++ ++++||+
T Consensus 82 ~~~~~~~~i~v~d~~~---~~~~~~~~~~~~~~------~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~Sa~ 151 (188)
T 2wjg_A 82 INEKPDLVVNIVDATA---LERNLYLTLQLMEM------GANLLLALNKMDLAKSLGIEIDVDKLEKILGVK-VVPLSAA 151 (188)
T ss_dssp HHHCCSEEEEEEEGGG---HHHHHHHHHHHHTT------TCCEEEEEECHHHHHHTTCCCCHHHHHHHHTSC-EEECBGG
T ss_pred hccCCCEEEEEecchh---HHHHHHHHHHHHhc------CCCEEEEEEhhhccccccchHHHHHHHHHhCCC-eEEEEec
Confidence 35999999999875 56667788777643 789999999999865443334577888889986 9999999
Q ss_pred c-cCHHHHHHHHHHHHhCCC
Q 010673 435 S-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~~~~ 453 (504)
+ .|++++|+.|.+.+....
T Consensus 152 ~~~~v~~l~~~i~~~~~~~~ 171 (188)
T 2wjg_A 152 KKMGIEELKKAISIAVKDKK 171 (188)
T ss_dssp GTBSHHHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHHHHHHHHHhcc
Confidence 9 999999999999886543
No 118
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.3e-21 Score=174.76 Aligned_cols=143 Identities=14% Similarity=0.212 Sum_probs=119.5
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..||++++++|+++|..||+|+||.|+.+||..+++ .+|.+++++++..++..++.+ +++.++|++|+.++...
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~-~lg~~~~~~~~~~~~~~~d~d-----~~~~i~~~ef~~~~~~~ 76 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR-SLGLSPSEAEVNDLMNEIDVD-----GNHQIEFSEFLALMSRQ 76 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHH-HHTCCCCHHHHHHHHTTTCSS-----CSSSBCTTHHHHHHTSS
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HcCCChhHHHHHHHHHHhCcC-----CCccchHHHHHHHHHHh
Confidence 578999999999999999999999999999999977 569999999999999998776 46779999999776543
Q ss_pred Hhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 129 IEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 129 ~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
... ...++++.+|+.||.|++|+|+.++| . .+ ..++... .+++.+||+.+| |+||.|+++||.+|+..
T Consensus 77 ~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~-~l-------~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 77 LKSNDSEQELLEAFKVFDKNGDGLISAAELKH-VL-------TSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp CCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHH-HH-------HTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred cccCCcHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 322 23367999999999999999999999 6 33 1222222 267889999999 99999999999999975
Q ss_pred C
Q 010673 206 A 206 (504)
Q Consensus 206 ~ 206 (504)
.
T Consensus 148 ~ 148 (176)
T 2lhi_A 148 G 148 (176)
T ss_dssp C
T ss_pred c
Confidence 4
No 119
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=4.5e-19 Score=187.10 Aligned_cols=164 Identities=18% Similarity=0.197 Sum_probs=124.6
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhccccc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCD 360 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad 360 (504)
....+||+|+|.+|||||||+++|++..+.. +.+|.+.. ...+... + ..+.+||++|.+.+..++ ..+++.+|
T Consensus 319 ~~~~~ki~lvG~~nvGKSsLl~~l~~~~~~~-~~~T~~~~--~~~~~~~-~-~~~~l~Dt~G~~~~~~~~--~~~~~~ad 391 (497)
T 3lvq_E 319 SNKEMRILMLGLDAAGKTTILYKLKLGQSVT-TIPTVGFN--VETVTYK-N-VKFNVWDVGGQDKIRPLW--RHYYTGTQ 391 (497)
T ss_dssp -CCEEEEEEECSTTSSHHHHHHHHHHSSCCC-CCCCSSEE--EEEEESS-S-CEEEEEEECCCGGGSGGG--GGGGTTCC
T ss_pred cccceeEEEEcCCCCCHHHHHHHHhcCCCCC-cCCcccee--EEEEEeC-C-EEEEEEECCCcHHHHHHH--HHHhccCC
Confidence 3567999999999999999999999988654 44676653 3346665 3 678899999998887775 56899999
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC-------CeEEEec
Q 010673 361 VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE-------PPIPVSM 433 (504)
Q Consensus 361 ~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~-------~~~~vSa 433 (504)
++|+|||++++.+|..+..|+..+..... ..++|+|+|+||+|+..... ..++...++.. ++++|||
T Consensus 392 ~~i~V~D~~~~~s~~~~~~~~~~~~~~~~--~~~~p~ilv~NK~Dl~~~~~----~~~~~~~~~~~~~~~~~~~~~~~SA 465 (497)
T 3lvq_E 392 GLIFVVDCADRDRIDEARQELHRIINDRE--MRDAIILIFANKQDLPDAMK----PHEIQEKLGLTRIRDRNWYVQPSCA 465 (497)
T ss_dssp EEEEEEETTCGGGHHHHHHHHHHHHTSGG--GTTCEEEEEEECCSSSSCCC----HHHHHHHTTCTTCCSSCEEEEECBT
T ss_pred EEEEEEECcchhHHHHHHHHHHHHhhhhh--cCCCcEEEEEECCCCCcCCC----HHHHHHHhchhhhhcCCeEEEEEEC
Confidence 99999999999999999999988865421 35899999999999976433 22334444432 3899999
Q ss_pred cc-cCHHHHHHHHHHHHhCCCCCCC
Q 010673 434 KS-KDLNNVFSRIIWAAEHPHLNIP 457 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~~~~~~~~ 457 (504)
++ .||+++|++|.+.+.......+
T Consensus 466 ~~g~gi~~l~~~l~~~~~~~~~~~~ 490 (497)
T 3lvq_E 466 TSGDGLYEGLTWLTSNYKSKLAAAL 490 (497)
T ss_dssp TTTBTHHHHHHHHHHHCC-------
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 99 9999999999998865544433
No 120
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=99.80 E-value=2e-19 Score=173.01 Aligned_cols=159 Identities=18% Similarity=0.151 Sum_probs=118.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhh----hhhhhc-
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKIL----SNKEAL- 356 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~----~~~~~~- 356 (504)
.+.++|+++|.+|||||||+|+|++..+.....|.+........+... ...+.+||++|...+.... -+..++
T Consensus 3 ~~~~kI~lvG~~nvGKTsL~n~l~g~~~~~~~~pg~tv~~~~~~~~~~--~~~~~l~DtpG~~~~~~~~~~e~v~~~~~~ 80 (258)
T 3a1s_A 3 LHMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYK--GYTINLIDLPGTYSLGYSSIDEKIARDYLL 80 (258)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHTTCEEEEECTTSCCEEEEEEEEET--TEEEEEEECCCCSSCCSSSHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHHHCCCCcccCCCCceEEEEEEEEEEC--CeEEEEEECCCcCccCCCCHHHHHHHHHHh
Confidence 356899999999999999999999987654444433333444445444 3678899999985543211 012333
Q ss_pred -ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc
Q 010673 357 -ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS 435 (504)
Q Consensus 357 -~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~ 435 (504)
..+|++++|+|+++.++. ..|..++... ++|+++|+||+|+...+.......++++.++++ ++++||++
T Consensus 81 ~~~~d~ii~V~D~t~~~~~---~~~~~~l~~~------~~pvilv~NK~Dl~~~~~i~~~~~~l~~~lg~~-vi~~SA~~ 150 (258)
T 3a1s_A 81 KGDADLVILVADSVNPEQS---LYLLLEILEM------EKKVILAMTAIDEAKKTGMKIDRYELQKHLGIP-VVFTSSVT 150 (258)
T ss_dssp HSCCSEEEEEEETTSCHHH---HHHHHHHHTT------TCCEEEEEECHHHHHHTTCCBCHHHHHHHHCSC-EEECCTTT
T ss_pred hcCCCEEEEEeCCCchhhH---HHHHHHHHhc------CCCEEEEEECcCCCCccchHHHHHHHHHHcCCC-EEEEEeeC
Confidence 589999999999987543 3466666643 799999999999865444433578899999987 99999999
Q ss_pred -cCHHHHHHHHHHHHhCC
Q 010673 436 -KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 436 -~gi~el~~~l~~~~~~~ 452 (504)
.|++++++.|.+.+..+
T Consensus 151 g~gi~el~~~i~~~~~~~ 168 (258)
T 3a1s_A 151 GEGLEELKEKIVEYAQKN 168 (258)
T ss_dssp CTTHHHHHHHHHHHHHSS
T ss_pred CcCHHHHHHHHHHHhhcc
Confidence 99999999999987643
No 121
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=99.80 E-value=9.5e-20 Score=164.35 Aligned_cols=154 Identities=18% Similarity=0.214 Sum_probs=110.0
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhH----h--hhhhhhh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV----K--KILSNKE 354 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~----~--~~~~~~~ 354 (504)
..++|+|+|++|||||||+|+|++..+.. .+.+|+. .+....+.++ + ..+.+||++|.... . .+.+...
T Consensus 3 ~~~ki~ivG~~g~GKStLl~~l~~~~~~~~~~~~~~t~-~~~~~~~~~~-~-~~~~l~Dt~G~~~~~~~~~~~~~~~~~~ 79 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTR-DVLREHIHID-G-MPLHIIDTAGLREASDEVERIGIERAWQ 79 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSTTCCC-SCEEEEEEET-T-EEEEEEECCCCSCCSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcceeeCCCCcee-ceeeEEEEEC-C-eEEEEEECCCcccchhHHHHHHHHHHHH
Confidence 45899999999999999999999887532 2333443 3445556776 4 44678999987432 1 1222235
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEecc
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak 434 (504)
+++.+|++++|||++++.++.. ..|+..+.... ..++|+++|+||+|+...... +++..+. +++++||+
T Consensus 80 ~~~~ad~~i~v~D~~~~~s~~~-~~~~~~~~~~~---~~~~p~ilv~NK~Dl~~~~~~------~~~~~~~-~~~~~SA~ 148 (172)
T 2gj8_A 80 EIEQADRVLFMVDGTTTDAVDP-AEIWPEFIARL---PAKLPITVVRNKADITGETLG------MSEVNGH-ALIRLSAR 148 (172)
T ss_dssp HHHTCSEEEEEEETTTCCCCSH-HHHCHHHHHHS---CTTCCEEEEEECHHHHCCCCE------EEEETTE-EEEECCTT
T ss_pred HHHhCCEEEEEEECCCCCCHHH-HHHHHHHHHhc---ccCCCEEEEEECccCCcchhh------hhhccCC-ceEEEeCC
Confidence 6899999999999999988764 56777776542 347999999999998543211 1112334 38999999
Q ss_pred c-cCHHHHHHHHHHHHh
Q 010673 435 S-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~ 450 (504)
+ .|++++|+.|.+.+.
T Consensus 149 ~g~gv~~l~~~l~~~~~ 165 (172)
T 2gj8_A 149 TGEGVDVLRNHLKQSMG 165 (172)
T ss_dssp TCTTHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHhh
Confidence 9 999999999998763
No 122
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=99.80 E-value=2.5e-19 Score=163.55 Aligned_cols=155 Identities=14% Similarity=0.135 Sum_probs=111.6
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCC-----------hhhHhhhhhhh
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP-----------EEGVKKILSNK 353 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g-----------~~~~~~~~~~~ 353 (504)
+||+|+|.+|||||||+++|++..+...+.+++..... .+.+. .+.+||++| ++.+..+. .
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~t~~~~--~~~~~----~~~l~Dt~G~~~~~~~~~~~~~~~~~~~--~ 73 (190)
T 2cxx_A 2 ATIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKII--EIEWK----NHKIIDMPGFGFMMGLPKEVQERIKDEI--V 73 (190)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHSCCCSSSSSTTCTTSCE--EEEET----TEEEEECCCBSCCTTSCHHHHHHHHHHH--H
T ss_pred cEEEEECCCCCCHHHHHHHHhCcCCccCCCCCccceeE--EEecC----CEEEEECCCccccccCCHHHHHHHHHHH--H
Confidence 68999999999999999999999887666554433222 23332 466889998 44555444 3
Q ss_pred hhccc-ccEEEEEEeCCCcccHHHH-HHHHHH--------HHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHh
Q 010673 354 EALAS-CDVTIFVYDSSDEYSWKRT-KELLVE--------VARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQEL 423 (504)
Q Consensus 354 ~~~~~-ad~iilV~D~s~~~s~~~~-~~~~~~--------l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~ 423 (504)
.+++. ++++++||++.+..++..+ ..|... +..... ..++|+++|+||+|+.... .+..+++++.+
T Consensus 74 ~~~~~~~~~~~~v~~v~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~piilv~nK~Dl~~~~--~~~~~~~~~~~ 149 (190)
T 2cxx_A 74 HFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLR--ELDIPTIVAVNKLDKIKNV--QEVINFLAEKF 149 (190)
T ss_dssp HHHHHHGGGCCEEEEEEETTHHHHHHHHHHHTTCCCHHHHHHHHHH--HTTCCEEEEEECGGGCSCH--HHHHHHHHHHH
T ss_pred HHHHhhhccCCEEEEEEcchhhhhHHHhhhccCccHHHHHHHHHHH--hcCCceEEEeehHhccCcH--HHHHHHHHHHh
Confidence 45555 7767777777777777766 555432 111100 2379999999999998754 44788899999
Q ss_pred CCC------CeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 424 GIE------PPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 424 ~~~------~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
+.+ +++++||++ .|++++|++|.+.+..
T Consensus 150 ~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~ 184 (190)
T 2cxx_A 150 EVPLSEIDKVFIPISAKFGDNIERLKNRIFEVIRE 184 (190)
T ss_dssp TCCGGGHHHHEEECCTTTCTTHHHHHHHHHHHHHH
T ss_pred hhhhhccCCcEEEEecCCCCCHHHHHHHHHHhcch
Confidence 985 259999999 9999999999998754
No 123
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=99.80 E-value=8.8e-19 Score=160.44 Aligned_cols=157 Identities=17% Similarity=0.180 Sum_probs=108.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCC----------hhhHhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIP----------EEGVKKIL 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g----------~~~~~~~~ 350 (504)
....++|+|+|.+|||||||+|+|++..+.. +.++.+.+........+ . .+.+||++| .+.+..+.
T Consensus 20 ~~~~~~i~v~G~~~~GKSsli~~l~~~~~~~-~~~~~~~t~~~~~~~~~-~--~~~i~Dt~G~~~~~~~~~~~~~~~~~~ 95 (195)
T 3pqc_A 20 PPLKGEVAFVGRSNVGKSSLLNALFNRKIAF-VSKTPGKTRSINFYLVN-S--KYYFVDLPGYGYAKVSKKERMLWKRLV 95 (195)
T ss_dssp CCTTCEEEEEEBTTSSHHHHHHHHHTSCCSC-CCSSCCCCCCEEEEEET-T--TEEEEECCCBSSSCCCHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHcCcccc-ccCCCCCccCeEEEEEC-C--cEEEEECCCCccccCChhhHHHHHHHH
Confidence 3566899999999999999999999988433 22333332223223333 2 356899999 44454443
Q ss_pred hhhhhcc---cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH---HHHHHHHHhC
Q 010673 351 SNKEALA---SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ---DSARVTQELG 424 (504)
Q Consensus 351 ~~~~~~~---~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~---~~~~~~~~~~ 424 (504)
..+++ .+|++++|+|+++..+.... .+...+... ++|+++|+||+|+........ ...+++...+
T Consensus 96 --~~~~~~~~~~~~vi~v~d~~~~~~~~~~-~~~~~~~~~------~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~ 166 (195)
T 3pqc_A 96 --EDYFKNRWSLQMVFLLVDGRIPPQDSDL-MMVEWMKSL------NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYG 166 (195)
T ss_dssp --HHHHHHCTTEEEEEEEEETTSCCCHHHH-HHHHHHHHT------TCCEEEEEECGGGSCGGGHHHHHHHHHHHHHSSC
T ss_pred --HHHHhcCcCceEEEEEecCCCCCCHHHH-HHHHHHHHc------CCCEEEEEEChhcCChHHHHHHHHHHHHHHhhcC
Confidence 22344 45999999999887655432 233334332 789999999999986544322 5556666655
Q ss_pred CCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 425 IEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 425 ~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
..+++++||++ .|++++|++|.+.+.
T Consensus 167 ~~~~~~~Sa~~~~gv~~l~~~l~~~l~ 193 (195)
T 3pqc_A 167 EYTIIPTSSVTGEGISELLDLISTLLK 193 (195)
T ss_dssp CSCEEECCTTTCTTHHHHHHHHHHHHC
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHhh
Confidence 44599999999 999999999998874
No 124
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP}
Probab=99.80 E-value=1.5e-19 Score=187.29 Aligned_cols=190 Identities=15% Similarity=0.212 Sum_probs=121.3
Q ss_pred HHHHH-HHhcCCCCh--------HHHHH----HhhhhhhhhhhhcccCceEEEEEEcCCCchhhHHHHHHhcCCCCCC--
Q 010673 248 SLANL-IYVGYGGDP--------AAALR----VTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSEN-- 312 (504)
Q Consensus 248 ~~~~l-~~lg~~~~~--------~~~l~----~~~~~~~~~~~~~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~-- 312 (504)
.++++ +.++|+++. ...+. .+.......+.++..++.++|+|+|++|||||||+|+|++.++...
T Consensus 175 ~~a~iEa~iDf~ed~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~~~r~~~kV~ivG~~nvGKSSLln~L~~~~~a~v~~ 254 (462)
T 3geh_A 175 ILAEIEARIDFEEDLPPLDDEAIISDIENIAAEISQLLATKDKGELLRTGLKVAIVGRPNVGKSSLLNAWSQSDRAIVTD 254 (462)
T ss_dssp HHHHHHHHTTSSSSSCCCCTTTHHHHHHHHHHHHHHHTTTHHHHHHHHHCEEEEEEECTTSSHHHHHHHHHHHHBSCCSC
T ss_pred HHHHHHhhccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCEEEEEcCCCCCHHHHHHHHhCCCcccccC
Confidence 45666 788887642 11222 2222222334455567889999999999999999999998765432
Q ss_pred CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhh------hhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHH
Q 010673 313 YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK------ILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVAR 386 (504)
Q Consensus 313 ~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~------~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~ 386 (504)
..+|+.+ +....+.++ | ..+.+||++|...... +.++..++..+|++++|+|++++.+... ..|+..+.
T Consensus 255 ~~gtT~d-~~~~~i~~~-g-~~v~liDT~G~~~~~~~ve~~gi~~~~~~~~~aD~vl~VvD~s~~~~~~~-~~i~~~l~- 329 (462)
T 3geh_A 255 LPGTTRD-VVESQLVVG-G-IPVQVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWTTGD-QEIYEQVK- 329 (462)
T ss_dssp CTTCCHH-HHHHEEEET-T-EEEEECC--------------------CCCCSCSEEEEEEETTTCSCHHH-HHHHHHHT-
T ss_pred CCCeeEE-EEEEEEEEC-C-EEEEEEECCccccchhHHHHHHHHHHhhhhhcCCEEEEEeccCCCCCHHH-HHHHHhcc-
Confidence 3344443 333345555 4 5567899999744322 2234557889999999999999887765 45555442
Q ss_pred hccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHHHHHhCCC
Q 010673 387 LGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 387 ~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~-~gi~el~~~l~~~~~~~~ 453 (504)
+.|+++|+||+|+....... ..+++. ...+++++||++ .|++++++.|.+.+....
T Consensus 330 -------~~piivV~NK~Dl~~~~~~~-~~~~~~---~~~~~i~iSAktg~Gi~eL~~~i~~~~~~~~ 386 (462)
T 3geh_A 330 -------HRPLILVMNKIDLVEKQLIT-SLEYPE---NITQIVHTAAAQKQGIDSLETAILEIVQTGK 386 (462)
T ss_dssp -------TSCEEEEEECTTSSCGGGST-TCCCCT---TCCCEEEEBTTTTBSHHHHHHHHHHHHTTSS
T ss_pred -------CCcEEEEEECCCCCcchhhH-HHHHhc---cCCcEEEEECCCCCCHHHHHHHHHHHHhccC
Confidence 47999999999998754432 111111 223589999999 999999999999987654
No 125
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.79 E-value=5.9e-20 Score=160.30 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=116.5
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
++++++.|+++|..||+|+||.|+.+||..+++ .+|.+++++++..|+..++.+ ++|.|+|++|+.++......
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~d~~-----~~g~i~~~eF~~~~~~~~~~ 74 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMR-ALGFEPKKEEIKKMISEIDKE-----GTGKMNFGDFLTVMTQKMSE 74 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHTTT-----CCSEEEHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCC-----CCCeeeHHHHHHHHHHHhcc
Confidence 467899999999999999999999999999977 569999999999999999876 46679999999887654432
Q ss_pred -CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 132 -GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 132 -~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
...+++..+|+.||.|++|.|+.++| . .+ ..++... .+++.+||+.+|.|+||.|+++||..++.
T Consensus 75 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 75 KDTKEEILKAFKLFDDDETGKISFKNLKR-VA-------KELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSBCHHHHHH-HH-------HHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred ccHHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 33467999999999999999999998 5 32 1233222 26788999999999999999999998874
No 126
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=99.79 E-value=1.6e-18 Score=170.34 Aligned_cols=172 Identities=18% Similarity=0.192 Sum_probs=115.4
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCC--CCCccceEEEEEEEcCCCcEEEEEEecCChhhHh-----hh-hhhhhh
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENY--APTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK-----KI-LSNKEA 355 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~-----~~-~~~~~~ 355 (504)
..+|+|+|.+|||||||+|+|++..+.... +.|++..... .+.. +...+.+||++|..... .+ .....+
T Consensus 7 ~g~V~ivG~~nvGKSTLln~l~g~~~~ivs~~~~tTr~~i~~-i~~~--~~~~l~l~DTpG~~~~~~~l~~~~~~~~~~~ 83 (301)
T 1wf3_A 7 SGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRG-ILTE--GRRQIVFVDTPGLHKPMDALGEFMDQEVYEA 83 (301)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEE-EEEE--TTEEEEEEECCCCCCCCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCceeeecCCCCceeEEEEE-EEEe--CCcEEEEecCccccchhhHHHHHHHHHHHHH
Confidence 457999999999999999999999886543 3455543322 2222 34778899999975421 01 112567
Q ss_pred cccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHH-hCCCCeEEEecc
Q 010673 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQE-LGIEPPIPVSMK 434 (504)
Q Consensus 356 ~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~-~~~~~~~~vSak 434 (504)
++.+|++++|+|++++.+... ..++..+... ..+.|+++|+||+|+...... ..+..+. .+..+++++||+
T Consensus 84 l~~ad~il~VvD~~~~~~~~~-~~i~~~l~~~----~~~~p~ilV~NK~Dl~~~~~~---~~~~~~~~~~~~~~~~iSA~ 155 (301)
T 1wf3_A 84 LADVNAVVWVVDLRHPPTPED-ELVARALKPL----VGKVPILLVGNKLDAAKYPEE---AMKAYHELLPEAEPRMLSAL 155 (301)
T ss_dssp TSSCSEEEEEEETTSCCCHHH-HHHHHHHGGG----TTTSCEEEEEECGGGCSSHHH---HHHHHHHTSTTSEEEECCTT
T ss_pred HhcCCEEEEEEECCCCCChHH-HHHHHHHHhh----cCCCCEEEEEECcccCCchHH---HHHHHHHhcCcCcEEEEeCC
Confidence 899999999999998866543 2333444433 247999999999999865430 2223333 343358999999
Q ss_pred c-cCHHHHHHHHHHHHhC-CCCCCCCcc-cccchh
Q 010673 435 S-KDLNNVFSRIIWAAEH-PHLNIPETE-TGRNRK 466 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~~-~~~~~~~~~-~~~~~~ 466 (504)
+ .|++++++.|.+.+.. +..+.++.. .+.+.+
T Consensus 156 ~g~gv~~l~~~l~~~l~~~~~~y~~~~~~td~~~~ 190 (301)
T 1wf3_A 156 DERQVAELKADLLALMPEGPFFYPEDYAKSDQTFG 190 (301)
T ss_dssp CHHHHHHHHHHHHTTCCBCCCSSCTTCCSBSSCHH
T ss_pred CCCCHHHHHHHHHHhcccCCCCCCcccccCCCCHH
Confidence 9 9999999999987643 333433333 344444
No 127
>1xzp_A Probable tRNA modification GTPase TRME; GTP-binding, THF-binding, hydrolase; 2.30A {Thermotoga maritima} SCOP: a.24.25.1 c.37.1.8 d.250.1.2 PDB: 1xzq_A* 1xzp_B 1xzq_B*
Probab=99.78 E-value=1.2e-18 Score=181.44 Aligned_cols=160 Identities=17% Similarity=0.190 Sum_probs=114.7
Q ss_pred hhhcccCceEEEEEEcCCCchhhHHHHHHhcCCCC--CCCCCCccceEEEEEEEcCCCcEEEEEEecCChh-hHhh----
Q 010673 276 KKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFS--ENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE-GVKK---- 348 (504)
Q Consensus 276 ~~~~~~~~~~kI~vvG~~~vGKSSLin~l~~~~~~--~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~-~~~~---- 348 (504)
+.++..+..++|+|+|.||||||||+|+|++.++. ..+++|+.+ +....+.++ | ..+.+||++|.. ....
T Consensus 235 ~~~~~~r~~~kV~ivG~pnvGKSSLln~L~~~~~a~vs~~~gTT~d-~~~~~i~~~-g-~~~~l~DTaG~~~~~~~~ve~ 311 (482)
T 1xzp_A 235 DAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRD-VISEEIVIR-G-ILFRIVDTAGVRSETNDLVER 311 (482)
T ss_dssp HHHHHHHHCEEEEEECCHHHHTCHHHHHHHHHTBCCCCCSSCCSSC-SCCEEEEET-T-EEEEEEESSCCCSSCCTTCCC
T ss_pred hhhhhccCCCEEEEECcCCCcHHHHHHHHHCCCCCccCCCCCeeee-eEEEEEecC-C-eEEEEEECCCccccchhhHHH
Confidence 33445567799999999999999999999998753 234445554 334456666 4 567889999975 3321
Q ss_pred --hhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCC
Q 010673 349 --ILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIE 426 (504)
Q Consensus 349 --~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~ 426 (504)
+..+..+++.+|++|+|+|++++.+++.. .++..+ .++|+++|+||+|+.... ..++..+++. .+.
T Consensus 312 ~gi~~~~~~~~~aD~vl~VvD~s~~~s~~~~-~il~~l--------~~~piivV~NK~DL~~~~-~~~~~~~~~~-~~~- 379 (482)
T 1xzp_A 312 LGIERTLQEIEKADIVLFVLDASSPLDEEDR-KILERI--------KNKRYLVVINKVDVVEKI-NEEEIKNKLG-TDR- 379 (482)
T ss_dssp CCHHHHHHHHHHCSEEEEEEETTSCCCHHHH-HHHHHH--------TTSSEEEEEEECSSCCCC-CHHHHHHHHT-CST-
T ss_pred HHHHHHHHHhhcccEEEEEecCCCCCCHHHH-HHHHHh--------cCCCEEEEEECccccccc-CHHHHHHHhc-CCC-
Confidence 22335688999999999999999888763 333332 278999999999997532 2233333322 223
Q ss_pred CeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 427 PPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 427 ~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
++++|||++ .|++++++.|.+.+.
T Consensus 380 ~~i~iSAktg~Gi~eL~~~l~~~~~ 404 (482)
T 1xzp_A 380 HMVKISALKGEGLEKLEESIYRETQ 404 (482)
T ss_dssp TEEEEEGGGTCCHHHHHHHHHHHTH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHh
Confidence 489999999 999999999999764
No 128
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=99.78 E-value=2.7e-19 Score=173.86 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=117.2
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHh----------hhhhhh
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK----------KILSNK 353 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~----------~~~~~~ 353 (504)
.++|+++|.+|||||||+|+|++..+.....+++........+... + ..+.+||++|...+. .+.+..
T Consensus 3 ~~~I~lvG~~n~GKSTLin~l~g~~~~v~~~~g~t~~~~~~~~~~~-~-~~~~liDtpG~~~~~~~~~~~~~~e~i~~~~ 80 (274)
T 3i8s_A 3 KLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTT-D-HQVTLVDLPGTYSLTTISSQTSLDEQIACHY 80 (274)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHTTCEEEEECTTSSSEEEEEEEECS-S-CEEEEEECCCCSCSCC----CCHHHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHhCCCcccCCCCCeeEEEEEEEEEeC-C-CceEEEECcCCCccccccccCCHHHHHHHHH
Confidence 5899999999999999999999988654444554444555667766 3 456779999975543 122111
Q ss_pred hhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEec
Q 010673 354 EALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSM 433 (504)
Q Consensus 354 ~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSa 433 (504)
.....+|++++|+|+++.++. ..|...+.+. ++|+++|+||+|+..........+.+++.++++ ++++||
T Consensus 81 ~~~~~~d~ii~VvD~~~~~~~---~~~~~~l~~~------~~p~ivv~NK~Dl~~~~~~~~~~~~l~~~lg~~-~i~~SA 150 (274)
T 3i8s_A 81 ILSGDADLLINVVDASNLERN---LYLTLQLLEL------GIPCIVALNMLDIAEKQNIRIEIDALSARLGCP-VIPLVS 150 (274)
T ss_dssp HHHTCCSEEEEEEEGGGHHHH---HHHHHHHHHH------TCCEEEEEECHHHHHHTTEEECHHHHHHHHTSC-EEECCC
T ss_pred HhhcCCCEEEEEecCCChHHH---HHHHHHHHhc------CCCEEEEEECccchhhhhHHHHHHHHHHhcCCC-EEEEEc
Confidence 223799999999999986543 4455555544 799999999999876544433567888999987 999999
Q ss_pred cc-cCHHHHHHHHHHHHhCC
Q 010673 434 KS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~~~ 452 (504)
++ .|++++++.|.+.+...
T Consensus 151 ~~g~gi~el~~~i~~~~~~~ 170 (274)
T 3i8s_A 151 TRGRGIEALKLAIDRYKANE 170 (274)
T ss_dssp GGGHHHHHHHHHHHTCCCCC
T ss_pred CCCCCHHHHHHHHHHHHhcC
Confidence 99 99999999998876543
No 129
>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum}
Probab=99.78 E-value=5.4e-19 Score=187.92 Aligned_cols=163 Identities=15% Similarity=0.160 Sum_probs=119.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEE------EEEcC--CCcEEEEEEecCChhhHhhhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVN------VVDQP--GGNKKTLILQEIPEEGVKKILSN 352 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~------~v~~~--~~~~~~li~d~~g~~~~~~~~~~ 352 (504)
....+||+++|.+|||||||+++|++..+...+.+|++..+... .+.+. +....+.+||++|++.+..+.
T Consensus 38 ~~~~~kV~lvG~~~vGKSSLl~~l~~~~~~~~~~~t~g~~~~~~~~~~~~~v~~~~~~~~~~~~i~Dt~G~e~~~~~~-- 115 (535)
T 3dpu_A 38 HLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHFWDFGGQEIMHASH-- 115 (535)
T ss_dssp CCCEEEEEEESSSCSSHHHHHHHHHC-----------CCCEEEEEGGGSGGGTTCSTTTTCEEEEECCCSCCTTTTTC--
T ss_pred cccceEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceEEEEeccccccceeecCCCceEEEEEEECCcHHHHHHHH--
Confidence 56789999999999999999999999998877888888766644 22232 224678889999987776665
Q ss_pred hhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEE
Q 010673 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPV 431 (504)
Q Consensus 353 ~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~v 431 (504)
..+++.+|++|+|||+++. +.+..|+..+... ..+.|+++|+||+|+....... +..++++..++.+ +++|
T Consensus 116 ~~~l~~~d~ii~V~D~s~~---~~~~~~~~~l~~~----~~~~pvilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~-~~~v 187 (535)
T 3dpu_A 116 QFFMTRSSVYMLLLDSRTD---SNKHYWLRHIEKY----GGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENR-FHRI 187 (535)
T ss_dssp HHHHHSSEEEEEEECGGGG---GGHHHHHHHHHHH----SSSCCEEEEECCTTTCTTCCCCHHHHHHHCGGGTTC-EEEC
T ss_pred HHHccCCcEEEEEEeCCCc---hhHHHHHHHHHHh----CCCCCEEEEEECCCcccccccCHHHHHHHHHhcCCc-eEEE
Confidence 4578899999999999875 4557788888876 4479999999999998766543 4677888888876 9999
Q ss_pred eccc-cCHHHHHHHHHHHHhCCC
Q 010673 432 SMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 432 Sak~-~gi~el~~~l~~~~~~~~ 453 (504)
||++ .||+++++.|.+.+....
T Consensus 188 SA~~g~gi~eL~~~l~~~~~~~~ 210 (535)
T 3dpu_A 188 SCKNGDGVESIAKSLKSAVLHPD 210 (535)
T ss_dssp CC-----CTTHHHHHHHHHTCTT
T ss_pred ecCcccCHHHHHHHHHHHHhccc
Confidence 9999 999999999999986654
No 130
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=99.78 E-value=1.5e-19 Score=173.61 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=114.2
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhh----------hhhhhh
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK----------ILSNKE 354 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~----------~~~~~~ 354 (504)
.+|+++|.+|||||||+|+|++........|++........+.++ + ..+.+||++|...+.. +. ..
T Consensus 2 ~kI~lvG~~n~GKSTL~n~L~g~~~~v~~~pg~Tv~~~~~~~~~~-~-~~~~lvDtpG~~~~~~~~~~~~~~e~i~--~~ 77 (256)
T 3iby_A 2 THALLIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLLG-E-HLIEITDLPGVYSLVANAEGISQDEQIA--AQ 77 (256)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTTSEEEEECTTSSSEEEEEEEEET-T-EEEEEEECCCCSSCC------CHHHHHH--HH
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCccCCCCceEEEEEEEEEEC-C-eEEEEEeCCCcccccccccCCCHHHHHH--HH
Confidence 489999999999999999999987654444555544555566666 4 4778899999754432 22 33
Q ss_pred hc--ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEe
Q 010673 355 AL--ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVS 432 (504)
Q Consensus 355 ~~--~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vS 432 (504)
++ ..+|++|+|+|+++.+++.. +...+... ++|+++|+||+|+............+++.++++ ++++|
T Consensus 78 ~~~~~~~d~vi~VvDas~~~~~~~---l~~~l~~~------~~pvilv~NK~Dl~~~~~~~~~~~~l~~~lg~~-vi~~S 147 (256)
T 3iby_A 78 SVIDLEYDCIINVIDACHLERHLY---LTSQLFEL------GKPVVVALNMMDIAEHRGISIDTEKLESLLGCS-VIPIQ 147 (256)
T ss_dssp HHHHSCCSEEEEEEEGGGHHHHHH---HHHHHTTS------CSCEEEEEECHHHHHHTTCEECHHHHHHHHCSC-EEECB
T ss_pred HHhhCCCCEEEEEeeCCCchhHHH---HHHHHHHc------CCCEEEEEEChhcCCcCCcHHHHHHHHHHcCCC-EEEEE
Confidence 55 88999999999998655443 33444332 799999999999876544434567788899987 99999
Q ss_pred ccc-cCHHHHHHHHHHH
Q 010673 433 MKS-KDLNNVFSRIIWA 448 (504)
Q Consensus 433 ak~-~gi~el~~~l~~~ 448 (504)
|++ .|++++++.|.+.
T Consensus 148 A~~g~gi~el~~~i~~~ 164 (256)
T 3iby_A 148 AHKNIGIPALQQSLLHC 164 (256)
T ss_dssp GGGTBSHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHhh
Confidence 999 9999999999987
No 131
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=99.78 E-value=2.3e-18 Score=161.68 Aligned_cols=161 Identities=14% Similarity=0.054 Sum_probs=107.4
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCC-CC--CCCCCccceEEEEEEEcCCCcEEEEEEecCCh----------hhHh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPF-SE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE----------EGVK 347 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~-~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~----------~~~~ 347 (504)
..+.++|+|+|.+|||||||+|+|++..+ .. ...+++.. .....+... +...+.+||++|. +.+.
T Consensus 26 ~~~~~~i~v~G~~~~GKSslin~l~~~~~~~~~~~~~~~t~~-~~~~~~~~~-~~~~~~l~DtpG~~~~~~~~~~~~~~~ 103 (223)
T 4dhe_A 26 PTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQH-INYFSVGPA-AEPVAHLVDLPGYGYAEVPGAAKAHWE 103 (223)
T ss_dssp CCCSCEEEEEESCHHHHHHHHHHHTTCSSSSCTTCCCCSCCC-EEEEEESCT-TSCSEEEEECCCCCSSCCCSTHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHhCCCcceeecCCCCcccc-eEEEEecCC-CCCcEEEEcCCCCCcccCChhhHHHHH
Confidence 34678999999999999999999999873 22 22233332 223233322 3456779999993 3333
Q ss_pred hhhhhhhhc---ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH---HHHHHHH
Q 010673 348 KILSNKEAL---ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ---DSARVTQ 421 (504)
Q Consensus 348 ~~~~~~~~~---~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~---~~~~~~~ 421 (504)
.+. ..++ ..+|++++|+|++++.+... ..++..+... ++|+++|+||+|+........ ...+...
T Consensus 104 ~~~--~~~~~~~~~~d~vi~v~d~~~~~~~~~-~~~~~~l~~~------~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~l~ 174 (223)
T 4dhe_A 104 QLL--SSYLQTRPQLCGMILMMDARRPLTELD-RRMIEWFAPT------GKPIHSLLTKCDKLTRQESINALRATQKSLD 174 (223)
T ss_dssp HHH--HHHHHHCTTEEEEEEEEETTSCCCHHH-HHHHHHHGGG------CCCEEEEEECGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHhcCcCcCEEEEEEeCCCCCCHHH-HHHHHHHHhc------CCCEEEEEeccccCChhhHHHHHHHHHHHHH
Confidence 333 2233 44899999999998755433 4455555543 789999999999987554322 2223333
Q ss_pred Hh------CCCCeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 422 EL------GIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 422 ~~------~~~~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
.+ ...+++++||++ .|++++++.|.+.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~SA~~g~gv~~l~~~l~~~~~~~ 212 (223)
T 4dhe_A 175 AYRDAGYAGKLTVQLFSALKRTGLDDAHALIESWLRPA 212 (223)
T ss_dssp HHHHHTCCSCEEEEEEBTTTTBSHHHHHHHHHHHHC--
T ss_pred hhhhcccCCCCeEEEeecCCCcCHHHHHHHHHHhcCcc
Confidence 32 223589999999 99999999999987544
No 132
>3r7w_B Gtpase2, GTP-binding protein GTR2; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_B*
Probab=99.77 E-value=2.2e-19 Score=176.03 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=113.5
Q ss_pred EEEEEcCCCchhhHHHHHHhcCCCCC---CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhh-hhhhhhhcccccE
Q 010673 286 RCLLFGPQNAGKSALLNSFLERPFSE---NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK-ILSNKEALASCDV 361 (504)
Q Consensus 286 kI~vvG~~~vGKSSLin~l~~~~~~~---~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~-~~~~~~~~~~ad~ 361 (504)
||+++|++|||||||++++.++.+.. .+.+|++..+.. + . ....+.+||++|++++.. .+.+..+++++++
T Consensus 1 KIvllGdsgvGKTSLl~~~~~~~~~~~~~~~~~Tig~~~~~--v--~-~~v~LqIWDTAGQErf~~~~l~~~~yyr~a~~ 75 (331)
T 3r7w_B 1 MVLLMGVRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLEH--F--S-TLIDLAVMELPGQLNYFEPSYDSERLFKSVGA 75 (331)
T ss_dssp CEEEECSTTSSTTHHHHHHHSCCCSGGGTTCCCCCSCCCEE--E--C-SSSCEEEEECCSCSSSCCCSHHHHHHHTTCSE
T ss_pred CEEEECCCCCCHHHHHHHHHcCCCCCccceecCeeeeeeEE--E--c-cEEEEEEEECCCchhccchhhhhhhhccCCCE
Confidence 68999999999999999988765432 245777765542 3 3 446788999999988753 1112568899999
Q ss_pred EEEEEeCCCc--ccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc-------cchH-HHHHHHHH----hCCCC
Q 010673 362 TIFVYDSSDE--YSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT-------MAVQ-DSARVTQE----LGIEP 427 (504)
Q Consensus 362 iilV~D~s~~--~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~-------~~~~-~~~~~~~~----~~~~~ 427 (504)
+|+|||++++ +++..+..|+..+... .+++|+++||||+|+..+. ++.. +.+++++. ++++
T Consensus 76 ~IlV~Ditd~~~~~~~~l~~~l~~~~~~----~~~ipillvgNK~DL~~~~~R~~~~R~V~~~~~~~la~~~~~~~~i~- 150 (331)
T 3r7w_B 76 LVYVIDSQDEYINAITNLAMIIEYAYKV----NPSINIEVLIHKVDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVS- 150 (331)
T ss_dssp EEEECCCSSCTTHHHHHHHHHHHHHHHH----CTTCEEEEECCCCCSSCSHHHHHHHHHHHHHHHHTTSSSSCSCCCEE-
T ss_pred EEEEEECCchHHHHHHHHHHHHHHHhhc----CCCCcEEEEEECcccCchhhhhhHHHHhhHHHHHHHHhhcccccCce-
Confidence 9999999998 2233333445555444 4589999999999998753 2222 56667775 5665
Q ss_pred eEEEeccccCHHHHHHHHHHHHh
Q 010673 428 PIPVSMKSKDLNNVFSRIIWAAE 450 (504)
Q Consensus 428 ~~~vSak~~gi~el~~~l~~~~~ 450 (504)
+++|||++.||.+.|..|++.+.
T Consensus 151 f~eTSAkd~nV~eAFs~iv~~li 173 (331)
T 3r7w_B 151 FYLTSIFDHSIYEAFSRIVQKLI 173 (331)
T ss_dssp EECCCSSSSHHHHHHHHHHTTSS
T ss_pred EEEeccCCCcHHHHHHHHHHHHH
Confidence 99999988779999999987653
No 133
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=99.77 E-value=7.3e-19 Score=170.19 Aligned_cols=152 Identities=16% Similarity=0.156 Sum_probs=111.4
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCC-CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHh------hhhhhhhhc
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSEN-YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVK------KILSNKEAL 356 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~-~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~------~~~~~~~~~ 356 (504)
.++|+++|++|||||||+|+|++...... +++++.. .. ...+.. ...+.+||++|...+. .+. ..++
T Consensus 3 ~~kI~lvG~~nvGKSTL~n~L~g~~~~v~~~pg~tv~-~~--~~~~~~-~~~l~l~DtpG~~~~~~~~~~e~v~--~~~~ 76 (272)
T 3b1v_A 3 MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVE-RK--SGLVKK-NKDLEIQDLPGIYSMSPYSPEAKVA--RDYL 76 (272)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHCCCCCCCSSSCCCCS-CE--EEECTT-CTTEEEEECCCCSCSSCSSHHHHHH--HHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHCCCCcccCCCCCcEE-EE--EEEEec-CCeEEEEECCCcCccCCCChHHHHH--HHHH
Confidence 57999999999999999999999764333 3333322 22 233332 3457789999986543 222 2344
Q ss_pred c--cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEecc
Q 010673 357 A--SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 357 ~--~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak 434 (504)
. .+|++++|+|+++.++ ...|..++.+. ++|+++|+||+|+............+++.++++ ++++||+
T Consensus 77 ~~~~~d~vi~V~D~t~~e~---~~~~~~~l~~~------~~p~ilv~NK~Dl~~~~~~~~~~~~l~~~lg~~-vi~~SA~ 146 (272)
T 3b1v_A 77 LSQRADSILNVVDATNLER---NLYLTTQLIET------GIPVTIALNMIDVLDGQGKKINVDKLSYHLGVP-VVATSAL 146 (272)
T ss_dssp HTTCCSEEEEEEEGGGHHH---HHHHHHHHHHT------CSCEEEEEECHHHHHHTTCCCCHHHHHHHHTSC-EEECBTT
T ss_pred hcCCCCEEEEEecCCchHh---HHHHHHHHHhc------CCCEEEEEEChhhCCcCCcHHHHHHHHHHcCCC-EEEEEcc
Confidence 3 6999999999988644 34566666643 799999999999865443334567888999987 9999999
Q ss_pred c-cCHHHHHHHHHHHHhC
Q 010673 435 S-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~~ 451 (504)
+ .|++++|+.|.+.+..
T Consensus 147 ~g~gi~el~~~i~~~~~~ 164 (272)
T 3b1v_A 147 KQTGVDQVVKKAAHTTTS 164 (272)
T ss_dssp TTBSHHHHHHHHHHSCTT
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 9 9999999999987643
No 134
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.77 E-value=8.9e-19 Score=155.36 Aligned_cols=152 Identities=16% Similarity=0.166 Sum_probs=125.2
Q ss_pred CCcccccccCcchHHHHHHHHHhHhhhcCCC-CCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCH
Q 010673 40 TAPLFDHDEQTLKPRCVRALKRIFIICDHDM-DGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTL 118 (504)
Q Consensus 40 ~~pl~~~~~~~l~~~~~~~l~~~F~~~D~d~-dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 118 (504)
++|+|......|++++++.++++|..+|.|+ ||.|+.+|+..+++. +|.+++++++..+++.++.+ ++|.|++
T Consensus 1 l~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~-----~~g~i~~ 74 (161)
T 1dtl_A 1 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEVDED-----GSGTVDF 74 (161)
T ss_dssp ----CTTGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTT-----SSSSBCH
T ss_pred CcHHHHHHHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCC-----CCCeEcH
Confidence 3577888889999999999999999999999 999999999999774 69999999999999999877 4777999
Q ss_pred HhHHHHHHHHHh----cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCC
Q 010673 119 SGFLFLHALFIE----KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDG 192 (504)
Q Consensus 119 ~~Fl~l~~~~~~----~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG 192 (504)
++|+.++..... ....+.+..+|+.||.|++|.|+.++| . .+. .++... .+.+..+|+.+|.|+||
T Consensus 75 ~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~-~l~-------~~g~~~~~~~~~~~~~~~D~d~dg 146 (161)
T 1dtl_A 75 DEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKI-MLQ-------ATGETITEDDIEELMKDGDKNNDG 146 (161)
T ss_dssp HHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGG-GGT-------TC--CCCHHHHHHHHHHHCTTSSS
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHH-HHH-------HhCCCCCHHHHHHHHHHhCCCCCC
Confidence 999988876653 233467999999999999999999998 5 331 222222 26788999999999999
Q ss_pred CCCHHHHhhhhcc
Q 010673 193 AVRPAELEDLFLT 205 (504)
Q Consensus 193 ~l~~~e~~~l~~~ 205 (504)
.|+++||..++..
T Consensus 147 ~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 147 RIDYDEFLEFMKG 159 (161)
T ss_dssp EEEHHHHHHHHHC
T ss_pred cEeHHHHHHHHHc
Confidence 9999999988763
No 135
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.76 E-value=8.1e-19 Score=153.80 Aligned_cols=142 Identities=18% Similarity=0.241 Sum_probs=119.2
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|++++++.++++|..||.|+||.|+.+||..+++. +|.+++++++..++..++.+ ++|.|++++|+.++...
T Consensus 2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~-----~~g~i~~~eF~~~~~~~ 75 (148)
T 1exr_A 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDAD-----GNGTIDFPEFLSLMARK 75 (148)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHHCCC-----CCCcCcHHHHHHHHHhc
Confidence 4688999999999999999999999999999999775 69999999999999999876 46779999999887654
Q ss_pred Hh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 129 IE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 129 ~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.. ....++++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+|.|+||.|+++||..++.
T Consensus 76 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 76 MKEQDSEEELIEAFKVFDRDGNGLISAAELRH-VM-------TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHH-HH-------HHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 43 233467999999999999999999988 5 33 1222222 26788999999999999999999998875
No 136
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=99.76 E-value=2.7e-18 Score=166.61 Aligned_cols=157 Identities=20% Similarity=0.208 Sum_probs=118.4
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhh------hhhhhhhc-
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK------ILSNKEAL- 356 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~------~~~~~~~~- 356 (504)
.++|+++|++|||||||+|+|++..+.....++++.......+.+. + ..+.+||++|...+.. +. ..++
T Consensus 3 ~~~i~lvG~~g~GKTTL~n~l~g~~~~~~~~~~~t~~~~~~~~~~~-~-~~~~l~DtpG~~~~~~~~~~~~~~--~~~~~ 78 (271)
T 3k53_A 3 LKTVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYR-E-KEFLVVDLPGIYSLTAHSIDELIA--RNFIL 78 (271)
T ss_dssp CEEEEEEECSSSSHHHHHHHHHTTCEEEEECTTSSCEEEEEEEEET-T-EEEEEEECCCCSCCCSSCHHHHHH--HHHHH
T ss_pred eeEEEEECCCCCCHHHHHHHHhCCCcccCCCCCeEEEeeEEEEEEC-C-ceEEEEeCCCccccccCCHHHHHH--HHhhh
Confidence 5799999999999999999999987754455555555555566665 3 4578899999754432 22 2333
Q ss_pred -ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc
Q 010673 357 -ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS 435 (504)
Q Consensus 357 -~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~ 435 (504)
.++|++++|+|+++.. ....|..++... ..+|+++|+||+|+............+++.++++ ++++||++
T Consensus 79 ~~~~d~vi~v~D~~~~~---~~~~~~~~~~~~-----~~~p~ilv~NK~Dl~~~~~~~~~~~~l~~~lg~~-~~~~Sa~~ 149 (271)
T 3k53_A 79 DGNADVIVDIVDSTCLM---RNLFLTLELFEM-----EVKNIILVLNKFDLLKKKGAKIDIKKMRKELGVP-VIPTNAKK 149 (271)
T ss_dssp TTCCSEEEEEEEGGGHH---HHHHHHHHHHHT-----TCCSEEEEEECHHHHHHHTCCCCHHHHHHHHSSC-EEECBGGG
T ss_pred ccCCcEEEEEecCCcch---hhHHHHHHHHhc-----CCCCEEEEEEChhcCcccccHHHHHHHHHHcCCc-EEEEEeCC
Confidence 6899999999998853 334555555543 1399999999999865443333477888999987 99999999
Q ss_pred -cCHHHHHHHHHHHHhCCC
Q 010673 436 -KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 436 -~gi~el~~~l~~~~~~~~ 453 (504)
.|++++++.|.+.+....
T Consensus 150 g~gi~~l~~~i~~~~~~~~ 168 (271)
T 3k53_A 150 GEGVEELKRMIALMAEGKV 168 (271)
T ss_dssp TBTHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHhccc
Confidence 999999999999886543
No 137
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.75 E-value=1.8e-18 Score=154.76 Aligned_cols=146 Identities=15% Similarity=0.173 Sum_probs=120.9
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++++.++++|..+|.|+||.|+.+||..++. .+|.+++.+++..++..++.+ ++|.|++++|+.++..
T Consensus 19 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~eF~~~~~~ 92 (169)
T 3qrx_A 19 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMR-ALGFEPKKEEIKKMISEIDKD-----GSGTIDFEEFLTMMTA 92 (169)
T ss_dssp -CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHH-HTSCCCCHHHHHHHHHHHCSS-----SSSSEEHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhcCC-----CCCcCCHHHHHHHHHH
Confidence 5678999999999999999999999999999999976 569999999999999999776 4677999999988765
Q ss_pred HHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 128 FIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 128 ~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.... ...+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+|.|+||.|+++||..++.
T Consensus 93 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 164 (169)
T 3qrx_A 93 KMGERDSREEILKAFRLFDDDNSGTITIKDLRR-VA-------KELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 164 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHH-HH-------HHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC
T ss_pred HhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 4432 34567999999999999999999988 5 33 1222222 26788999999999999999999999988
Q ss_pred cCC
Q 010673 205 TAP 207 (504)
Q Consensus 205 ~~p 207 (504)
..|
T Consensus 165 ~~~ 167 (169)
T 3qrx_A 165 KTS 167 (169)
T ss_dssp ---
T ss_pred hcc
Confidence 665
No 138
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=99.74 E-value=1e-17 Score=173.54 Aligned_cols=160 Identities=19% Similarity=0.209 Sum_probs=113.4
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCCh----------hhHhhh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE----------EGVKKI 349 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~----------~~~~~~ 349 (504)
...++|+++|.+|||||||+|+|++..+.. .+.+|+.+. ....+..+ + ..+.+||++|. +.+..+
T Consensus 173 ~~~~ki~lvG~~nvGKSSLin~l~~~~~~~~~~~~gtT~d~-~~~~~~~~-~-~~~~l~DT~G~~~~~~~~~~~e~~~~~ 249 (436)
T 2hjg_A 173 EEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDA-VDTSFTYN-Q-QEFVIVDTAGMRKKGKVYETTEKYSVL 249 (436)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHTSTTEEEC----------CCEEEEET-T-EEEEETTHHHHTCBTTBCCCCSHHHHH
T ss_pred ccCcEEEEEcCCCCCHHHHHHHHhCCCceeecCCCCceeee-eEEEEEEC-C-eEEEEEECCCcCcCccccchHHHHHHH
Confidence 457899999999999999999999988742 234455543 23345565 4 45778999987 333332
Q ss_pred hhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-H-HHHHHHHHh---C
Q 010673 350 LSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-Q-DSARVTQEL---G 424 (504)
Q Consensus 350 ~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~-~~~~~~~~~---~ 424 (504)
. +..+++.+|++++|+|++++.++++. .|+..+... ++|+++|+||+|+.+..... + ..+++.+.+ +
T Consensus 250 ~-~~~~~~~ad~~llv~D~~~~~s~~~~-~~~~~~~~~------~~~iiiv~NK~Dl~~~~~~~~~~~~~~~~~~l~~~~ 321 (436)
T 2hjg_A 250 R-ALKAIDRSEVVAVVLDGEEGIIEQDK-RIAGYAHEA------GKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLD 321 (436)
T ss_dssp H-HHHHHHHCSEEEEEEETTTCCCHHHH-HHHHHHHHT------TCEEEEEEECGGGSCCCTTHHHHHHHHHHHHCGGGT
T ss_pred H-HHHHHHhCCEEEEEEcCCcCCcHHHH-HHHHHHHHc------CCcEEEEEECccCCCcchHHHHHHHHHHHHhcccCC
Confidence 2 34578899999999999999998875 577776643 79999999999998765432 2 233334433 2
Q ss_pred CCCeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 425 IEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 425 ~~~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
..+++++||++ .|++++|+.+.+.+...
T Consensus 322 ~~~~~~~SA~tg~~v~~l~~~i~~~~~~~ 350 (436)
T 2hjg_A 322 YAPILFMSALTKKRIHTLMPAIIKASENH 350 (436)
T ss_dssp TSCEEECCTTTCTTGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecccCCCHHHHHHHHHHHHHHh
Confidence 22499999999 99999999999887543
No 139
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.73 E-value=3.7e-18 Score=148.28 Aligned_cols=139 Identities=12% Similarity=0.183 Sum_probs=116.3
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE 130 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~ 130 (504)
|++++++.++++|..||.|+||.|+.+||..+++. +|.+++.+++..++.. ++|.|++++|+.++.....
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~---------~~g~i~~~eF~~~~~~~~~ 70 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTDEYLEGMMSE---------APGPINFTMFLTMFGEKLN 70 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHH-TSCCCCHHHHHTTTTT---------SSSCCCHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHh---------CCCCcCHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999874 6999999999877754 3677999999988775544
Q ss_pred c-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCC
Q 010673 131 K-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAP 207 (504)
Q Consensus 131 ~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p 207 (504)
. ...+.++.+|+.||.|++|.|+.++| . .+. .++... .+++..+|+.+|.|+||.|+++||..++...|
T Consensus 71 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~-~l~-------~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 142 (143)
T 3j04_B 71 GTDPEDVIRNAFACFDEEASGFIHEDHLRE-LLT-------TMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142 (143)
T ss_dssp SSCCHHHHHHHHTTSCSSSCCCCCTTTHHH-HHH-------TSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSSC
T ss_pred cCCcHHHHHHHHHHHCCCCCCeEcHHHHHH-HHH-------HcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhccC
Confidence 3 34468999999999999999999999 5 331 222222 26788999999999999999999999988654
No 140
>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} SCOP: b.117.1.1 c.37.1.8
Probab=99.73 E-value=1e-17 Score=167.08 Aligned_cols=163 Identities=15% Similarity=0.108 Sum_probs=119.0
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCCCC--CccceEEEEEEEcCCCcEEEEEEecCChhhH----hhhh-hhhhhc
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENYAP--TTGEQYAVNVVDQPGGNKKTLILQEIPEEGV----KKIL-SNKEAL 356 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~--T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~----~~~~-~~~~~~ 356 (504)
..+|+|+|.+|||||||+|+|++........+ |.... ...+.++ +...+.+||++|.... ..+. .....+
T Consensus 158 la~V~lvG~~nvGKSTLln~L~~~~~~i~~~~ftTl~p~--~g~v~~~-~~~~~~l~DtPG~i~~a~~~~~l~~~fl~~i 234 (342)
T 1lnz_A 158 LADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPN--LGMVETD-DGRSFVMADLPGLIEGAHQGVGLGHQFLRHI 234 (342)
T ss_dssp CCCEEEESSTTSSHHHHHHHSEEECCEESSTTSSCCCCC--EEEEECS-SSCEEEEEEHHHHHHHTTCTTTTHHHHHHHH
T ss_pred cCeeeeeCCCCCCHHHHHHHHHcCCCccccCCccccCce--EEEEEeC-CCceEEEecCCCCcccccccchhHHHHHHHH
Confidence 45799999999999999999998875432222 33332 3346666 3356788999886321 1121 113345
Q ss_pred ccccEEEEEEeCCC---cccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCC-CCeEEEe
Q 010673 357 ASCDVTIFVYDSSD---EYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGI-EPPIPVS 432 (504)
Q Consensus 357 ~~ad~iilV~D~s~---~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~-~~~~~vS 432 (504)
..+|++|+|+|+++ +.+++.+..|+.++..+.. ...++|+++|+||+|+.... +..+++++.++. .+++++|
T Consensus 235 ~~~d~ll~VvD~s~~~~~~~~~~~~~~~~eL~~~~~-~l~~~p~ilV~NK~Dl~~~~---e~~~~l~~~l~~~~~v~~iS 310 (342)
T 1lnz_A 235 ERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNL-RLTERPQIIVANKMDMPEAA---ENLEAFKEKLTDDYPVFPIS 310 (342)
T ss_dssp HHCCEEEEEEESSCSSCCCHHHHHHHHHHHHHHSCS-STTTSCBCBEEECTTSTTHH---HHHHHHHHHCCSCCCBCCCS
T ss_pred HhccEEEEEEECCcccccChHHHHHHHHHHHHHhhh-hhcCCCEEEEEECccCCCCH---HHHHHHHHHhhcCCCEEEEE
Confidence 67999999999998 7889999999999887521 12479999999999997632 346677777763 2489999
Q ss_pred ccc-cCHHHHHHHHHHHHhCCC
Q 010673 433 MKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 433 ak~-~gi~el~~~l~~~~~~~~ 453 (504)
|++ .|++++++.|.+.+....
T Consensus 311 A~tg~gi~eL~~~l~~~l~~~~ 332 (342)
T 1lnz_A 311 AVTREGLRELLFEVANQLENTP 332 (342)
T ss_dssp SCCSSTTHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHHhhCc
Confidence 999 999999999999986543
No 141
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.73 E-value=6e-18 Score=148.29 Aligned_cols=143 Identities=17% Similarity=0.238 Sum_probs=120.5
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
.+.|++++++.++++|..+|.|+||.|+.+||..++. .+|..++++++..++..++.+ ++|.|++++|+.++..
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~-----~~g~i~~~eF~~~~~~ 75 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMR-TMGYMPTEMELIELSQQINMN-----LGGHVDFDDFVELMGP 75 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHH-HTTCCCCHHHHHHHHHHHHTT-----STTCCCHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCC-----CCccCcHHHHHHHHHH
Confidence 3578999999999999999999999999999999977 469999999999999999877 4677999999988765
Q ss_pred HHhcCC-----chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccc-cChhH-HHHHHHhhhhhcCCCCCCCCHHHH
Q 010673 128 FIEKGR-----LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVE-LASEA-VEFLRGIFGLYDIDNDGAVRPAEL 199 (504)
Q Consensus 128 ~~~~~~-----~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~-l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~ 199 (504)
...... .+.++.+|+.||.|++|.|+.++| . .+ .. ++... .+++..+|+.+|.|+||.|+++||
T Consensus 76 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF 147 (153)
T 3ox6_A 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELRE-AM-------RALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147 (153)
T ss_dssp HHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHH-HH-------HHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHH
T ss_pred HhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHH
Confidence 554333 367999999999999999999988 5 32 11 22222 267899999999999999999999
Q ss_pred hhhhc
Q 010673 200 EDLFL 204 (504)
Q Consensus 200 ~~l~~ 204 (504)
..++.
T Consensus 148 ~~~~~ 152 (153)
T 3ox6_A 148 VRMMS 152 (153)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 98874
No 142
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.73 E-value=7.9e-18 Score=150.27 Aligned_cols=153 Identities=12% Similarity=0.209 Sum_probs=125.3
Q ss_pred hhhccccCCCcccccccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCC-CCCHHHHHHHHHHhhhhccCC
Q 010673 32 AQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNA-PLQPAEIVGVKRVVQEKQHDG 110 (504)
Q Consensus 32 ~~~~~~~p~~pl~~~~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~-~~~~~e~~~~~~~~~~~~~~~ 110 (504)
++++++-++++.+ ..|++++++.++++|..||.|+||.|+.+||..+++. +|. +++.+++..++...
T Consensus 4 ~k~~~~~~~~~~~----~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~l~~~~------- 71 (166)
T 2mys_B 4 AKRRAAEGSSNVF----SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAA-MGRLNVKNEELDAMIKEA------- 71 (166)
T ss_pred hhhcccccCchhh----hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHC-------
Confidence 4566666665544 4788999999999999999999999999999999875 599 99999999988753
Q ss_pred cCCCCCCHHhHHHHHHHHHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhc
Q 010673 111 VNDLGLTLSGFLFLHALFIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYD 187 (504)
Q Consensus 111 ~~~~~i~~~~Fl~l~~~~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D 187 (504)
+|.|++++|+.++...... ...+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|
T Consensus 72 --dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~D 141 (166)
T 2mys_B 72 --SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEE-LL-------TTGGGRFTPEEIKNMWAAFP 141 (166)
T ss_pred --CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcceeHHHHHH-HH-------HHcCCCCCHHHHHHHHHhcC
Confidence 5679999999888765543 34578999999999999999999999 5 33 1222222 267889999999
Q ss_pred CCCCCCCCHHHHhhhhccC
Q 010673 188 IDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 188 ~d~dG~l~~~e~~~l~~~~ 206 (504)
.|+||.|+++||..++...
T Consensus 142 ~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 142 PDVAGNVDYKNICYVITHG 160 (166)
T ss_pred CCCCCeEeHHHHHHHHHhc
Confidence 9999999999999988754
No 143
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=99.73 E-value=1.1e-16 Score=161.55 Aligned_cols=160 Identities=18% Similarity=0.165 Sum_probs=116.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCC-CCCccceEEEEEEEcCCCcEEEEEEecCChhhHhh-------hhhhh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENY-APTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK-------ILSNK 353 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~-~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~-------~~~~~ 353 (504)
...++|+++|.+|||||||+|+|++..+.... ..++.. .....+... ...+.+||++|...... .....
T Consensus 165 ~~~~~v~lvG~~gvGKSTLin~L~~~~~~~~~~~~~t~~-~~~~~~~~~--~~~~~l~Dt~G~~~~~~~~~~~~~~~~~~ 241 (357)
T 2e87_A 165 LEIPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRG-INVGQFEDG--YFRYQIIDTPGLLDRPISERNEIEKQAIL 241 (357)
T ss_dssp SSSCEEEEECSTTSSHHHHHHHHCSSCCEEECCTTCSSC-EEEEEEEET--TEEEEEEECTTTSSSCSTTSCHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCccCCCCCeeec-eeEEEEEec--CceEEEEeCCCccccchhhhhHHHHHHHH
Confidence 56789999999999999999999998753322 223322 333334433 35678899988732110 01112
Q ss_pred hhcccccEEEEEEeCCCcc--cHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEE
Q 010673 354 EALASCDVTIFVYDSSDEY--SWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPV 431 (504)
Q Consensus 354 ~~~~~ad~iilV~D~s~~~--s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~v 431 (504)
.....+|++++|+|++++. ++.....|+..+... ..+.|+++|+||+|+...... +...+++...+.+ +++|
T Consensus 242 ~~~~~ad~illV~D~s~~~~~~~~~~~~~~~~i~~~----~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~-~~~i 315 (357)
T 2e87_A 242 ALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGE----FKDLPFLVVINKIDVADEENI-KRLEKFVKEKGLN-PIKI 315 (357)
T ss_dssp GGGGTCSEEEEEECTTCTTSSCHHHHHHHHHHHHHH----TTTSCEEEEECCTTTCCHHHH-HHHHHHHHHTTCC-CEEC
T ss_pred HHHhcCCEEEEEEeCCccccCCHHHHHHHHHHHHHh----cCCCCEEEEEECcccCChHHH-HHHHHHHHhcCCC-eEEE
Confidence 3445799999999999887 788888899888765 237999999999999864432 3455666677776 9999
Q ss_pred eccc-cCHHHHHHHHHHHHh
Q 010673 432 SMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 432 Sak~-~gi~el~~~l~~~~~ 450 (504)
||++ .|+++++++|.+.+.
T Consensus 316 SA~~g~gi~~l~~~i~~~l~ 335 (357)
T 2e87_A 316 SALKGTGIDLVKEEIIKTLR 335 (357)
T ss_dssp BTTTTBTHHHHHHHHHHHHH
T ss_pred eCCCCcCHHHHHHHHHHHHH
Confidence 9999 999999999998874
No 144
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.73 E-value=4.2e-18 Score=150.57 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=123.6
Q ss_pred cCcchHHHHHHHHHhHhhhc-CCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICD-HDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D-~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
...|++++++.++++|..|| .|+||.|+.+||..+++. +|.+++++++..+++.++.+ ++|.|++++|+.++.
T Consensus 4 ~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~eF~~~~~ 77 (158)
T 2jnf_A 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEV-LGIQQTKSTIRQLIDEFDPF-----GNGDIDFDSFKIIGA 77 (158)
T ss_dssp STTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHH-TTCSCSHHHHHHHHHHHCTT-----CCSEECHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 35789999999999999999 999999999999999775 69999999999999999876 466799999998887
Q ss_pred HHHhc-----CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHH
Q 010673 127 LFIEK-----GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAEL 199 (504)
Q Consensus 127 ~~~~~-----~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~ 199 (504)
..... ...+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|+||.|+++||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF 149 (158)
T 2jnf_A 78 RFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMRE-IL-------AELDETLSSEDLDAMIDEIDADGSGTVDFEEF 149 (158)
T ss_dssp HHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHH-HH-------HHHCTTCCHHHHHHHHHHHCSSCCSEECSHHH
T ss_pred HHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHH-HH-------HHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 65543 44568999999999999999999988 5 32 1222222 377889999999999999999999
Q ss_pred hhhhccCC
Q 010673 200 EDLFLTAP 207 (504)
Q Consensus 200 ~~l~~~~p 207 (504)
..++...|
T Consensus 150 ~~~~~~~~ 157 (158)
T 2jnf_A 150 MGVMTGGD 157 (158)
T ss_dssp HHHTSSCC
T ss_pred HHHHhccC
Confidence 99987654
No 145
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=99.73 E-value=1.8e-17 Score=172.61 Aligned_cols=162 Identities=19% Similarity=0.211 Sum_probs=114.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCC----------hhhHhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIP----------EEGVKK 348 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g----------~~~~~~ 348 (504)
....++|+++|.+|||||||+|+|++..... .+.+|+.+.+ ...+..+ + ..+.+||++| .+.+..
T Consensus 192 ~~~~~ki~ivG~~~vGKSslin~l~~~~~~~~~~~~gtt~~~~-~~~~~~~-~-~~~~l~DT~G~~~~~~~~~~~e~~~~ 268 (456)
T 4dcu_A 192 NEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAV-DTSFTYN-Q-QEFVIVDTAGMRKKGKVYETTEKYSV 268 (456)
T ss_dssp CTTCEEEEEECSTTSSHHHHHHHHHTSTTEEECC------CTT-SEEEEET-T-EEEEETTGGGTTTBTTBCCCCSHHHH
T ss_pred ccccceeEEecCCCCCHHHHHHHHhCCCccccCCCCCeEEEEE-EEEEEEC-C-ceEEEEECCCCCcCcccchHHHHHHH
Confidence 4567899999999999999999999876432 2334444322 2235555 4 4778899999 445444
Q ss_pred hhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHh----
Q 010673 349 ILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQEL---- 423 (504)
Q Consensus 349 ~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~---- 423 (504)
+. +..+++.+|++|+|+|++++.+... ..|+..+... ++|+++|+||+|+...+... ++..+.++..
T Consensus 269 ~~-~~~~~~~ad~~llviD~~~~~~~~~-~~~~~~~~~~------~~~~ilv~NK~Dl~~~~~~~~~~~~~~~~~~~~~~ 340 (456)
T 4dcu_A 269 LR-ALKAIDRSEVVAVVLDGEEGIIEQD-KRIAGYAHEA------GKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFL 340 (456)
T ss_dssp HH-HHHHHHHCSEEEEEEETTTCCCHHH-HHHHHHHHHT------TCEEEEEEECGGGSCCCSSHHHHHHHHHHHHCGGG
T ss_pred HH-HHHHHhhCCEEEEEEeCCCCcCHHH-HHHHHHHHHc------CCCEEEEEEChhcCCCchHHHHHHHHHHHHhcccC
Confidence 33 3567899999999999998765443 5566666543 79999999999998755543 3445555444
Q ss_pred CCCCeEEEeccc-cCHHHHHHHHHHHHhCCC
Q 010673 424 GIEPPIPVSMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 424 ~~~~~~~vSak~-~gi~el~~~l~~~~~~~~ 453 (504)
+..++++|||++ .|++++|+.|.+.+....
T Consensus 341 ~~~~~~~~SA~~g~gv~~l~~~i~~~~~~~~ 371 (456)
T 4dcu_A 341 DYAPILFMSALTKKRIHTLMPAIIKASENHS 371 (456)
T ss_dssp TTSCEEECCTTTCTTGGGHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCCCcCHHHHHHHHHHHHHHhc
Confidence 233599999999 999999999998875443
No 146
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.72 E-value=1e-17 Score=148.29 Aligned_cols=143 Identities=19% Similarity=0.203 Sum_probs=121.8
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++++.++++|..||.|+||.|+.+||..+++. +|.+++++++..++..++.+ ++|.|++++|+.++..
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~d~~-----~~g~i~~~eF~~~~~~ 87 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREILDLIDEYDSE-----GRHLMKYDDFYIVMGE 87 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTT-----SSSCEEHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCcC-----CCCeEeHHHHHHHHHH
Confidence 46789999999999999999999999999999999875 69999999999999999876 4677999999988776
Q ss_pred HHhcC-CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 128 FIEKG-RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 128 ~~~~~-~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
..... ..+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|+||.|+++||.+++.
T Consensus 88 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 88 KILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR-VA-------KELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp HHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred HHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 55544 3467999999999999999999988 5 33 1222222 26789999999999999999999998875
No 147
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.71 E-value=9.4e-18 Score=156.93 Aligned_cols=145 Identities=20% Similarity=0.273 Sum_probs=102.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCC---CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSEN---YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALA 357 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~---~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~ 357 (504)
....++|+|+|++|||||||+++|++..+... +.+++...+ ....+.+||++|.+.+...+ ..+++
T Consensus 9 ~~~~~~i~~~G~~g~GKTsl~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~Dt~G~~~~~~~~--~~~~~ 77 (218)
T 1nrj_B 9 KSYQPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADY---------DGSGVTLVDFPGHVKLRYKL--SDYLK 77 (218)
T ss_dssp -CCCCEEEEECSTTSSHHHHHHHHHHSSCCCBCCCSSCEEETTG---------GGSSCEEEECCCCGGGTHHH--HHHHH
T ss_pred cCCCCEEEEECCCCCCHHHHHHHHhcCCCCCeeeecCceEEEEe---------eCceEEEEECCCcHHHHHHH--HHHHH
Confidence 35678999999999999999999999886542 333333221 23457789999998776555 34555
Q ss_pred c----ccEEEEEEeCC-CcccHHHHHHHHHHHHHhccC-CCCCCcEEEEEECCCCCCCccch-------HHHHHHHHHhC
Q 010673 358 S----CDVTIFVYDSS-DEYSWKRTKELLVEVARLGED-SGYGVPCLLIASKDDLKPYTMAV-------QDSARVTQELG 424 (504)
Q Consensus 358 ~----ad~iilV~D~s-~~~s~~~~~~~~~~l~~~~~~-~~~~~piilV~NK~Dl~~~~~~~-------~~~~~~~~~~~ 424 (504)
. +|++|+|||++ ++.++..+..|+..+...... ...++|+++|+||+|+....... ++...++...+
T Consensus 78 ~~~~~~~~~i~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~~~~~~~~~~~ 157 (218)
T 1nrj_B 78 TRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKDALESEIQKVIERRK 157 (218)
T ss_dssp HHGGGEEEEEEEEETTSCTTCCHHHHHHHHHHHHHHHHHSTTCCCEEEEEECTTSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccCCEEEEEEECCCChHHHHHHHHHHHHHHhcccccccCCCCEEEEEEchHhcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 5 89999999999 889999988888887654210 13589999999999998766543 25667777777
Q ss_pred CCCeEEEeccc-cC
Q 010673 425 IEPPIPVSMKS-KD 437 (504)
Q Consensus 425 ~~~~~~vSak~-~g 437 (504)
.. ++++||++ .+
T Consensus 158 ~~-~~~~Sa~~~~~ 170 (218)
T 1nrj_B 158 KS-LNEVERKINEE 170 (218)
T ss_dssp HH-HHC--------
T ss_pred cc-ccccccccccc
Confidence 65 89999998 54
No 148
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.71 E-value=9.5e-18 Score=145.50 Aligned_cols=138 Identities=13% Similarity=0.208 Sum_probs=116.0
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
|++++++++++|..+|.|+||.|+.+||..+++. +|.+++++++..+++.++.+ ++|.|++++|+.++......
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~-----~~g~i~~~eF~~~~~~~~~~ 74 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADAT-----GNGKIQFPEFLSMMGRRMKQ 74 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTT-----CSSEEEHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCcC-----CCCeeeHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999875 69999999999999999876 46679999999888765543
Q ss_pred -CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 132 -GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 132 -~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
...+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+| |+||.|+++||..++.
T Consensus 75 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 75 TTSEDILRQAFRTFDPEGTGYIPKAALQD-AL-------LNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp CCCHHHHHHHHHHTCCSSCSCEEHHHHHH-HH-------HHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred CChHHHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 34567999999999999999999988 5 33 1222222 267889999999 9999999999998764
No 149
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.70 E-value=1.1e-17 Score=153.56 Aligned_cols=146 Identities=16% Similarity=0.146 Sum_probs=119.6
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..+++++++.++++|..+|.|+||.|+.+||..+++. +|..++ +++..++..++.+ ++|.|++++|+.++...
T Consensus 44 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~g~~~~-~~~~~l~~~~D~d-----~~g~i~~~EF~~~~~~~ 116 (191)
T 3k21_A 44 QQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK-DGLKLP-YNFDLLLDQIDSD-----GSGKIDYTEFIAAALDR 116 (191)
T ss_dssp HHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCC-TTHHHHHHHHCTT-----CSSSEEHHHHHHHHSCG
T ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-cCCCcH-HHHHHHHHHhCCC-----CCCeEeHHHHHHHHHhh
Confidence 5578899999999999999999999999999999875 599999 9999999999877 46779999999776322
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
. ....+.++.+|+.||.|++|.|+.++| . .+.. ......++....+++.++|+.+|.|+||.|+++||..++.
T Consensus 117 ~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~-~l~~-~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 117 K-QLSKKLIYCAFRVFDVDNDGEITTAELAH-ILYN-GNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp G-GCCHHHHHHHHHHHSTTCSSCBCHHHHHH-HHHH-SSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred h-hccHHHHHHHHHHhCCCCCCcCCHHHHHH-HHHh-cCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 1 244578999999999999999999999 5 3311 1111234444456799999999999999999999998874
No 150
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=99.70 E-value=8.2e-17 Score=166.86 Aligned_cols=153 Identities=22% Similarity=0.285 Sum_probs=101.7
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhH------hhh-hhhhhh
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV------KKI-LSNKEA 355 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~------~~~-~~~~~~ 355 (504)
.+|+|+|.||||||||+|+|++..... ..++++++. ....+.+. + ..+.+||++|.+.. ..+ ..+..+
T Consensus 2 ~~v~ivG~pnvGKStL~nrl~~~~~~~v~~~~g~T~d~-~~~~~~~~-~-~~~~l~DT~G~~~~~~~~~~~~~~~~~~~~ 78 (439)
T 1mky_A 2 ATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDP-VQDTVEWY-G-KTFKLVDTCGVFDNPQDIISQKMKEVTLNM 78 (439)
T ss_dssp CEEEEECCTTSSHHHHHHHHHC--------------CC-SEEEEEET-T-EEEEEEECTTTTSSGGGCCCHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCceecCCCCCccce-eeEEEEEC-C-eEEEEEECCCccccccchHHHHHHHHHHHH
Confidence 479999999999999999999987643 234455443 33446666 4 45678999996531 111 123567
Q ss_pred cccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHH-HHHHHHhCCCCeEEEecc
Q 010673 356 LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDS-ARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 356 ~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~-~~~~~~~~~~~~~~vSak 434 (504)
++.||++++|+|++++.+..+ ..+...+.+. ++|+++|+||+|+... ..... .++. .+++.+++++||+
T Consensus 79 ~~~ad~il~V~D~~~~~~~~d-~~i~~~l~~~------~~p~ilv~NK~D~~~~--~~~~~~~~~~-~lg~~~~~~iSA~ 148 (439)
T 1mky_A 79 IREADLVLFVVDGKRGITKED-ESLADFLRKS------TVDTILVANKAENLRE--FEREVKPELY-SLGFGEPIPVSAE 148 (439)
T ss_dssp HTTCSEEEEEEETTTCCCHHH-HHHHHHHHHH------TCCEEEEEESCCSHHH--HHHHTHHHHG-GGSSCSCEECBTT
T ss_pred HHhCCEEEEEEECCCCCCHHH-HHHHHHHHHc------CCCEEEEEeCCCCccc--cHHHHHHHHH-hcCCCCEEEEecc
Confidence 899999999999998766543 1222223322 7899999999998542 11222 4444 5677558999999
Q ss_pred c-cCHHHHHHHHHHHHh
Q 010673 435 S-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~ 450 (504)
+ .|++++++.|.+.+.
T Consensus 149 ~g~gv~~L~~~i~~~l~ 165 (439)
T 1mky_A 149 HNINLDTMLETIIKKLE 165 (439)
T ss_dssp TTBSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcc
Confidence 9 999999999998874
No 151
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=99.70 E-value=9.6e-17 Score=157.85 Aligned_cols=172 Identities=17% Similarity=0.234 Sum_probs=114.9
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCC--CCCccceEEEEEEEcCCCcEEEEEEecCChh-hHhh-----h-hhhhh
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENY--APTTGEQYAVNVVDQPGGNKKTLILQEIPEE-GVKK-----I-LSNKE 354 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~-~~~~-----~-~~~~~ 354 (504)
..+|+|+|++|||||||+|+|++..+.... ..|+..... ..+.. +...+.+||++|.. .... + .....
T Consensus 8 ~~~VaIvG~~nvGKSTLln~L~g~~~~i~s~~~~tTr~~~~-gi~~~--~~~~i~~iDTpG~~~~~~~~l~~~~~~~~~~ 84 (301)
T 1ega_A 8 CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIV-GIHTE--GAYQAIYVDTPGLHMEEKRAINRLMNKAASS 84 (301)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTCSEEECCCCSSCCSSCEE-EEEEE--TTEEEEEESSSSCCHHHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCccccCCCCCcceeeEE-EEEEE--CCeeEEEEECcCCCccchhhHHHHHHHHHHH
Confidence 457999999999999999999998875432 335443222 22333 34677889999885 2211 1 11245
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC-ccchHHHHHHHHHhCCCCeEEEec
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY-TMAVQDSARVTQELGIEPPIPVSM 433 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~-~~~~~~~~~~~~~~~~~~~~~vSa 433 (504)
+++.+|++++|+|+++ -+-. ..++..... ..+.|+++|+||+|+... ....+...++++.++...++++||
T Consensus 85 ~l~~~D~vl~Vvd~~~-~~~~--~~~i~~~l~-----~~~~P~ilvlNK~D~~~~~~~~~~~l~~l~~~~~~~~~i~iSA 156 (301)
T 1ega_A 85 SIGDVELVIFVVEGTR-WTPD--DEMVLNKLR-----EGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISA 156 (301)
T ss_dssp CCCCEEEEEEEEETTC-CCHH--HHHHHHHHH-----SSSSCEEEEEESTTTCCCHHHHHHHHHHHHTTSCCSEEEECCT
T ss_pred HHhcCCEEEEEEeCCC-CCHH--HHHHHHHHH-----hcCCCEEEEEECcccCccHHHHHHHHHHHHHhcCcCceEEEEC
Confidence 7889999999999987 3322 233332222 237999999999999873 222346667777777755899999
Q ss_pred cc-cCHHHHHHHHHHHHhC-CCCCCCCcccccchh
Q 010673 434 KS-KDLNNVFSRIIWAAEH-PHLNIPETETGRNRK 466 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~~-~~~~~~~~~~~~~~~ 466 (504)
++ .|++++++.|.+.+.. +..+.++...+.+.+
T Consensus 157 ~~g~~v~~l~~~i~~~l~~~~~~~~~~~~~d~~~~ 191 (301)
T 1ega_A 157 ETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQR 191 (301)
T ss_dssp TTTTTHHHHHHHHHTTCCBCCCSSCTTCCSCCSHH
T ss_pred CCCCCHHHHHHHHHHhCCcCCCCCCccccCCCCHH
Confidence 99 9999999999987643 333333333344433
No 152
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.70 E-value=3.4e-18 Score=151.56 Aligned_cols=144 Identities=13% Similarity=0.178 Sum_probs=119.1
Q ss_pred cchHHHHHHHHHhHhhhc--CCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICD--HDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D--~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
+|++++++.++++|..|| .|+||.|+.+||..+++ .+|..++.+++..++..++. ++|.|++++|+.++..
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~-~lg~~~~~~~~~~l~~~~d~------~~g~i~~~eF~~~~~~ 74 (159)
T 2ovk_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLR-CLGMNPTEAQVHQHGGTKKM------GEKAYKLEEILPIYEE 74 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHH-HTTCCCCHHHHHHTTCCSST------TSCEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhcC------CCCeEcHHHHHHHHHH
Confidence 689999999999999999 99999999999999987 56999999999999888743 2566999999987754
Q ss_pred HHh---cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhh--hhcCCCCCCCCHHHHh
Q 010673 128 FIE---KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFG--LYDIDNDGAVRPAELE 200 (504)
Q Consensus 128 ~~~---~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~--~~D~d~dG~l~~~e~~ 200 (504)
... ....+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+ .+|.|+||.|+++||.
T Consensus 75 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~-~l-------~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~ 146 (159)
T 2ovk_C 75 MSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRN-VL-------KMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLM 146 (159)
T ss_dssp HTTCSTTCCHHHHHHHHHHTCTTSSSEECHHHHHH-HH-------HHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHH
T ss_pred HhhccCCCcHHHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHH
Confidence 322 234467999999999999999999999 5 33 1223222 267889999 8999999999999999
Q ss_pred hhhccCCC
Q 010673 201 DLFLTAPE 208 (504)
Q Consensus 201 ~l~~~~p~ 208 (504)
+++...|.
T Consensus 147 ~~~~~~~~ 154 (159)
T 2ovk_C 147 KKVMAGPF 154 (159)
T ss_dssp HHHHHCSS
T ss_pred HHHhcCCC
Confidence 99987654
No 153
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.69 E-value=8.2e-18 Score=155.12 Aligned_cols=143 Identities=17% Similarity=0.155 Sum_probs=111.8
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|+++++..|+++|..+|.|+||.|+.+||..++... |..++++++..+++.++.+ ++|.|++++|+..+...
T Consensus 49 ~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d-----~~g~I~~~EF~~~~~~~ 122 (197)
T 3pm8_A 49 KHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI-GYQKIPPDIHQVLRDIDSN-----ASGQIHYTDFLAATIDK 122 (197)
T ss_dssp HHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-C----CHHHHHHHHC------------CEEHHHHHHTTCCH
T ss_pred HHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCC-----CCCeEcHHHHHHHHHHH
Confidence 45789999999999999999999999999999998854 9999999999999999877 46779999999776544
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCcccc--ChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVEL--ASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l--~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
......+.++.+|+.||.|++|.|+.++| . .+. .+ +.... +.+.++|+.+|.|+||.|+++||..++.
T Consensus 123 ~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~-~l~-------~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 194 (197)
T 3pm8_A 123 QTYLKKEVCLIPFKFFDIDGNGKISVEELKR-IFG-------RDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194 (197)
T ss_dssp HHHCSHHHHHHHHHHHCTTCSSEECHHHHHH-HHC-----------CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHCCCCCCCCCHHHHHH-HHH-------hcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 44456678999999999999999999999 6 331 12 22233 7799999999999999999999999876
Q ss_pred c
Q 010673 205 T 205 (504)
Q Consensus 205 ~ 205 (504)
.
T Consensus 195 ~ 195 (197)
T 3pm8_A 195 K 195 (197)
T ss_dssp C
T ss_pred c
Confidence 4
No 154
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.69 E-value=3.8e-18 Score=150.61 Aligned_cols=144 Identities=17% Similarity=0.224 Sum_probs=119.7
Q ss_pred cchHHHHHHHHHhHhhhcC--CCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDH--DMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~--d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
.|+++++++++++|..||. |+||.|+.+||..+++. +|..++.+++..+ ..++.+ ++|.|++++|+.++..
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l-~~~D~~-----~~g~i~~~eF~~~~~~ 74 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRC-LGINPRNEDVFAV-GGTHKM-----GEKSLPFEEFLPAYEG 74 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHH-TTCCCCHHHHHHT-TCCSST-----TSCEECHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHH-HhhCCC-----CCCeeeHHHHHHHHHH
Confidence 4789999999999999999 99999999999999774 6999999999988 777655 4666999999988876
Q ss_pred HHh--cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhh--hcCCCCCCCCHHHHhh
Q 010673 128 FIE--KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGL--YDIDNDGAVRPAELED 201 (504)
Q Consensus 128 ~~~--~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~--~D~d~dG~l~~~e~~~ 201 (504)
... ....+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+. +|.|+||.|+++||..
T Consensus 75 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 146 (156)
T 1wdc_C 75 LMDCEQGTFADYMEAFKTFDREGQGFISGAELRH-VL-------TALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 146 (156)
T ss_dssp HTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHH-HH-------HHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHH
T ss_pred HhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHH
Confidence 654 344478999999999999999999988 5 33 1222222 2678899999 9999999999999999
Q ss_pred hhccCCC
Q 010673 202 LFLTAPE 208 (504)
Q Consensus 202 l~~~~p~ 208 (504)
++...|.
T Consensus 147 ~~~~~~~ 153 (156)
T 1wdc_C 147 KVMAGPY 153 (156)
T ss_dssp HHHHCSC
T ss_pred HHhcCCC
Confidence 9987654
No 155
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=99.69 E-value=1.5e-17 Score=170.08 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=114.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCC--CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhh-----hhhhh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSEN--YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKI-----LSNKE 354 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~--~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~-----~~~~~ 354 (504)
...++|+|+|.+|||||||+|+|++..+... ..+++.+ .....+.+. +...+.+||++|...+..+ ..+..
T Consensus 32 ~~~~kI~IvG~~~vGKSTLin~L~~~~~~~~~~~~gtT~d-~~~~~~~~~-~~~~l~liDTpG~~d~~~l~~~~~~~~~~ 109 (423)
T 3qq5_A 32 GFRRYIVVAGRRNVGKSSFMNALVGQNVSIVSDYAGTTTD-PVYKSMELH-PIGPVTLVDTPGLDDVGELGRLRVEKARR 109 (423)
T ss_dssp CCCEEEEEECSCSTTTTTTTTSSCC-------------CC-CCEEEEEET-TTEEEEEEECSSTTCCCTTCCCCHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHcCCCCccCCCCCeeee-eEEEEEEEC-CCCeEEEEECcCCCcccchhHHHHHHHHH
Confidence 4578999999999999999999999887432 2333333 334456666 4457889999998655332 22355
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEecc
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak 434 (504)
++..+|++|+|+|++.. .....|+..+.+. ++|+++|+||+|+...... +..+++++.++++ ++++||+
T Consensus 110 ~l~~aD~vllVvD~~~~---~~~~~~l~~l~~~------~~piIvV~NK~Dl~~~~~~-~~~~~l~~~~g~~-v~~vSAk 178 (423)
T 3qq5_A 110 VFYRADCGILVTDSAPT---PYEDDVVNLFKEM------EIPFVVVVNKIDVLGEKAE-ELKGLYESRYEAK-VLLVSAL 178 (423)
T ss_dssp HHTSCSEEEEECSSSCC---HHHHHHHHHHHHT------TCCEEEECCCCTTTTCCCT-HHHHHSSCCTTCC-CCCCSSC
T ss_pred HHhcCCEEEEEEeCCCh---HHHHHHHHHHHhc------CCCEEEEEeCcCCCCccHH-HHHHHHHHHcCCC-EEEEECC
Confidence 78899999999999332 3346777777765 8999999999999876654 5566777777876 9999999
Q ss_pred c-cCHHHHHHHHHHHHhCC
Q 010673 435 S-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~~~ 452 (504)
+ .|++++++.|.+.+..+
T Consensus 179 tg~gI~eL~~~L~~~l~~~ 197 (423)
T 3qq5_A 179 QKKGFDDIGKTISEILPGD 197 (423)
T ss_dssp CTTSTTTHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHhhhhh
Confidence 9 99999999999998544
No 156
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.69 E-value=1.9e-17 Score=144.19 Aligned_cols=142 Identities=15% Similarity=0.212 Sum_probs=117.9
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++++.++++|..+|.|+||.|+.+|+..++.. +|.+++++++..++..++.+ ++|.|++++|+.++..
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~d~~-----~~g~i~~~ef~~~~~~ 75 (147)
T 4ds7_A 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRS-LGLSPSEAEVADLMNEIDVD-----GNHAIEFSEFLALMSR 75 (147)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTT-----SSSEEEHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHHhccC-----CCCcCcHHHHHHHHHH
Confidence 35789999999999999999999999999999999875 79999999999999999776 4667999999988765
Q ss_pred HHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 128 FIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 128 ~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.... ...+.+..+|+.+|.|++|.|+.+++ . .+ ..++... .+++..+|+.+| |+||.|+++||.+++.
T Consensus 76 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~-~l-------~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 76 QLKCNDSEQELLEAFKVFDKNGDGLISAAELKH-VL-------TSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred hccCCCcHHHHHHHHHHhCCCCCCeECHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 5442 33467999999999999999999988 5 33 1222222 267889999999 9999999999998764
No 157
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.68 E-value=5.9e-17 Score=141.31 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=115.9
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHh---hhhccCCcCCCCCCHHhHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVV---QEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~---~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
.|+++++++++++|..+|+|+||.|+.+||..++.. +|.+++.+++..++..+ +.+ + |.|++++|+.++.
T Consensus 1 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~~~~d~~-----~-g~i~~~eF~~~~~ 73 (149)
T 2mys_C 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARA-LGQNPTNAEINKILGNPSKEEMN-----A-AAITFEEFLPMLQ 73 (149)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhhhcccc-----C-CcCcHHHHHHHHH
Confidence 478999999999999999999999999999998774 69999999999999999 655 4 6699999998877
Q ss_pred HH--Hh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhh
Q 010673 127 LF--IE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELED 201 (504)
Q Consensus 127 ~~--~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~ 201 (504)
.. .. ....+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+. |.|+||.|+++||..
T Consensus 74 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~ 144 (149)
T 2mys_C 74 AAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRH-VL-------ATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVK 144 (149)
T ss_pred HHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHH-HH-------HHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHH
Confidence 65 22 233467999999999999999999988 5 33 1222222 2678999999 999999999999998
Q ss_pred hhc
Q 010673 202 LFL 204 (504)
Q Consensus 202 l~~ 204 (504)
++.
T Consensus 145 ~~~ 147 (149)
T 2mys_C 145 HIM 147 (149)
T ss_pred HHh
Confidence 875
No 158
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.68 E-value=2.3e-17 Score=149.01 Aligned_cols=146 Identities=19% Similarity=0.227 Sum_probs=118.0
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|++++++.++++|..+|.|+||.|+.+|+..+++ .+|.+++++++..++..++.+ ++|.|++++|+.++...
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~EF~~~~~~~ 76 (179)
T 2f2o_A 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDAD-----GNGTIDFPEFLTMMARK 76 (179)
T ss_dssp ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhccC-----CCCCCcHHHHHHHHHHH
Confidence 457889999999999999999999999999999977 479999999999999999877 46779999999877655
Q ss_pred Hh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 129 IE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 129 ~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.. ....+.+..+|+.||.|++|.|+.++| . .+ ..++... .+.+..+|+.+|.|+||.|+++||..++..
T Consensus 77 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~-~l-------~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 148 (179)
T 2f2o_A 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRH-VM-------TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148 (179)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred ccCcccHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 43 233467999999999999999999988 5 32 1222222 267889999999999999999999999986
Q ss_pred CCC
Q 010673 206 APE 208 (504)
Q Consensus 206 ~p~ 208 (504)
.+.
T Consensus 149 ~~~ 151 (179)
T 2f2o_A 149 KGG 151 (179)
T ss_dssp ---
T ss_pred cCC
Confidence 644
No 159
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.68 E-value=3.8e-17 Score=146.86 Aligned_cols=142 Identities=18% Similarity=0.127 Sum_probs=115.5
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHH---HHHHcCCCCCHHHHH-----------HHHHHhhhhccCCcCCCCC
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEF---QVKCFNAPLQPAEIV-----------GVKRVVQEKQHDGVNDLGL 116 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~---~~~~~g~~~~~~e~~-----------~~~~~~~~~~~~~~~~~~i 116 (504)
||+++++.++++|..||.|+||.|+.+||..+ ..+.+|.+++.+++. .++..++.+ ++|.|
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d-----~dg~i 75 (176)
T 1nya_A 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVG-----SDGSL 75 (176)
T ss_dssp CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSC-----TTCCB
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeE
Confidence 57889999999999999999999999999984 344689999999998 566666655 46779
Q ss_pred CHHhHHHHHHHHHhcCC--------chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhc
Q 010673 117 TLSGFLFLHALFIEKGR--------LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYD 187 (504)
Q Consensus 117 ~~~~Fl~l~~~~~~~~~--------~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D 187 (504)
++++|+.++........ .+.++.+|+.||.|++|.|+.+++ . .+ ..++ ...+.+..+|+.+|
T Consensus 76 ~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~-~l-------~~~g-~~~~~~~~~~~~~D 146 (176)
T 1nya_A 76 TEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAA-WL-------TALG-MSKAEAAEAFNQVD 146 (176)
T ss_dssp CHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHH-HH-------HHTT-CCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHH-HH-------HHhC-CCHHHHHHHHHHhC
Confidence 99999988776654333 245899999999999999999988 5 32 1222 12367889999999
Q ss_pred CCCCCCCCHHHHhhhhccC
Q 010673 188 IDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 188 ~d~dG~l~~~e~~~l~~~~ 206 (504)
.|+||.|+++||..++...
T Consensus 147 ~d~dg~i~~~ef~~~~~~~ 165 (176)
T 1nya_A 147 TNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp TTCSSEEEHHHHHHHHSCC
T ss_pred CCCCCCCcHHHHHHHHHHH
Confidence 9999999999999998754
No 160
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.68 E-value=9.5e-18 Score=154.98 Aligned_cols=148 Identities=23% Similarity=0.209 Sum_probs=111.1
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
..++++.++++|..+|.|+||.|+.+||..+++ .+|.+++++++..+++.++.+ ++|.|++++|+.++......
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~d-----~dg~i~~~ef~~~~~~~~~~ 105 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLA-KLGLVLDQAEAEGVCRKWDRN-----GSGTLDLEEFLRALRPPMSQ 105 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHH-TTTCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHTSCCCCH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHH-HcCCCCCHHHHHHHHHHhccC-----CCCcCcHHHHHHHHHhhcCc
Confidence 456778999999999999999999999999977 469999999999999999877 57779999999776432222
Q ss_pred CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcC-CCCCCCCHHHHhhhhccC
Q 010673 132 GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDI-DNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 132 ~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~-d~dG~l~~~e~~~l~~~~ 206 (504)
...+.++.+|+.||.|++|.|+.++| . .+.........++.... +.+.++|+.+|. |+||.|+++||..++...
T Consensus 106 ~~~~~~~~~F~~~D~d~~G~I~~~El~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~ 182 (204)
T 3e3r_A 106 AREAVIAAAFAKLDRSGDGVVTVDDLRG-VYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGV 182 (204)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHH-HCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCcCCCCeEeHHHHHH-HHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHc
Confidence 23357999999999999999999999 5 33211000001222223 678999999998 999999999999988854
No 161
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.68 E-value=1.4e-17 Score=146.45 Aligned_cols=143 Identities=15% Similarity=0.194 Sum_probs=119.5
Q ss_pred ccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 47 DEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 47 ~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....|++++++.++++|..||.|+||.|+.+||..+++ .+|..++.+++..++..+ +|.|++++|+.++.
T Consensus 6 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~~---------~g~i~~~eF~~~~~ 75 (153)
T 2ovk_B 6 RRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFS-SLGRVPPDDELNAMLKEC---------PGQLNFTAFLTLFG 75 (153)
T ss_dssp -CTTCCHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTT-TTTSCCCHHHHHHHHHHS---------SSCCCSHHHHHTTT
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHH-HhCCCCCHHHHHHHHHHc---------CCCCCHHHHHHHHH
Confidence 45779999999999999999999999999999999877 579999999999999876 56799999998776
Q ss_pred HHHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhh
Q 010673 127 LFIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLF 203 (504)
Q Consensus 127 ~~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~ 203 (504)
..... ...+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|. +||.|+++||.+++
T Consensus 76 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~ 146 (153)
T 2ovk_B 76 EKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKD-LL-------ENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIK 146 (153)
T ss_dssp TTTTTCCCTTHHHHHHHTTCSSCSSCCCHHHHHH-HH-------HHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHH
T ss_pred HHhccCChHHHHHHHHHHHCCCCCCeEcHHHHHH-HH-------HHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHH
Confidence 54332 34578999999999999999999998 5 33 1223222 2678899999999 99999999999999
Q ss_pred ccCCC
Q 010673 204 LTAPE 208 (504)
Q Consensus 204 ~~~p~ 208 (504)
...|.
T Consensus 147 ~~~~~ 151 (153)
T 2ovk_B 147 GKAED 151 (153)
T ss_dssp HCSCC
T ss_pred hcCcc
Confidence 87653
No 162
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.67 E-value=3.4e-17 Score=145.08 Aligned_cols=142 Identities=17% Similarity=0.179 Sum_probs=118.6
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|++++++.++++|..+|.|+||.|+.+|+..++. .+|.+++++++..++..++.+ ++|.|++++|+.++...
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~ef~~~~~~~ 85 (162)
T 1top_A 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDED-----GSGTIDFEEFLVMMVRQ 85 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTT-----SCCEEEHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHcCC-----CCCcEeHHHHHHHHHHH
Confidence 468999999999999999999999999999999977 469999999999999999776 46679999999877655
Q ss_pred HhcC----CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhh
Q 010673 129 IEKG----RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDL 202 (504)
Q Consensus 129 ~~~~----~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l 202 (504)
.... ..+.+..+|+.||.|++|.|+.++| . .+. .++... .+++..+|+.+|.|+||.|+++||..+
T Consensus 86 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~-~l~-------~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~ 157 (162)
T 1top_A 86 MKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE-ILR-------ATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHH-HHH-------TTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHH
T ss_pred hccccccccHHHHHHHHHHhCCCCCCcCcHHHHHH-HHH-------HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 4321 3467999999999999999999988 5 331 122111 267889999999999999999999988
Q ss_pred hc
Q 010673 203 FL 204 (504)
Q Consensus 203 ~~ 204 (504)
+.
T Consensus 158 ~~ 159 (162)
T 1top_A 158 ME 159 (162)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 163
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=99.67 E-value=1e-15 Score=156.80 Aligned_cols=166 Identities=17% Similarity=0.168 Sum_probs=112.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCC--CC-Ccc--------ceEEEE----EEEcC---CCcEEEEEEecCC
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENY--AP-TTG--------EQYAVN----VVDQP---GGNKKTLILQEIP 342 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--~~-T~~--------~~~~~~----~v~~~---~~~~~~li~d~~g 342 (504)
....++|+++|.+|+|||||+++|++....... .. +.. ..+... ..... .....+.+||++|
T Consensus 5 ~~~~~~I~vvG~~~~GKSTLi~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiDtPG 84 (403)
T 3sjy_A 5 VQPEVNIGVVGHVDHGKTTLVQAITGIWTSKKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPG 84 (403)
T ss_dssp CCCCCEEEEECSTTSSHHHHHHHHHSCCCCSSSEEEEEEEEECTTSCTTTTEESSSCCGGGTCCSCCEEEEEEEEEECCC
T ss_pred cCCCcEEEEECCCCCCHHHHHHHHhCcccccccCccccceeeccccccccceecccccccccccccccccceEEEEECCC
Confidence 456789999999999999999999986543211 00 000 000000 00000 0115677899999
Q ss_pred hhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHH
Q 010673 343 EEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQE 422 (504)
Q Consensus 343 ~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~ 422 (504)
++.+.... ...+..+|++|+|+|++++.++....+++..+... ...|+++|+||+|+.+........+++.+.
T Consensus 85 h~~~~~~~--~~~~~~~D~~ilVvda~~~~~~~qt~~~~~~~~~~-----~~~~iivviNK~Dl~~~~~~~~~~~~i~~~ 157 (403)
T 3sjy_A 85 HEVLMATM--LSGAALMDGAILVVAANEPFPQPQTREHFVALGII-----GVKNLIIVQNKVDVVSKEEALSQYRQIKQF 157 (403)
T ss_dssp CGGGHHHH--HHHHTTCSEEEEEEETTSCSSCHHHHHHHHHHHHH-----TCCCEEEEEECGGGSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHH--HHHHhhCCEEEEEEECCCCCCcHHHHHHHHHHHHc-----CCCCEEEEEECccccchHHHHHHHHHHHHH
Confidence 98775554 55788999999999999988777777777766654 135999999999998755433333333333
Q ss_pred h---CC--CCeEEEeccc-cCHHHHHHHHHHHHhCCC
Q 010673 423 L---GI--EPPIPVSMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 423 ~---~~--~~~~~vSak~-~gi~el~~~l~~~~~~~~ 453 (504)
+ +. .+++++||++ .|+++|++.|.+.+..+.
T Consensus 158 l~~~~~~~~~ii~vSA~~g~gi~~L~~~l~~~l~~~~ 194 (403)
T 3sjy_A 158 TKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPY 194 (403)
T ss_dssp HTTSTTTTCCEEECBTTTTBSHHHHHHHHHHHSCCCC
T ss_pred HHhhCCCCCEEEEEECCCCcChHHHHHHHHHhCCCCC
Confidence 2 21 2489999999 999999999998775443
No 164
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.67 E-value=5.5e-17 Score=148.69 Aligned_cols=173 Identities=14% Similarity=0.184 Sum_probs=134.4
Q ss_pred ccCCCcccccccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCC
Q 010673 37 LHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGL 116 (504)
Q Consensus 37 ~~p~~pl~~~~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i 116 (504)
.+|.++.+.+...++++ .++++++|..+|.|+||.|+.+||..++ ..+|.+++++++..+++.++.+ ++|.|
T Consensus 9 ~~~~~~~~~~~~~~~~~--~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~l~~~~D~d-----~dG~I 80 (191)
T 1y1x_A 9 MPTSTGVYAPSARHMND--NQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKN-----HSGEI 80 (191)
T ss_dssp -CCSCCTTSTTCCSSCT--TSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTT-----CSSSB
T ss_pred CCCcccccCCcccccCC--HHHHHHHHHHHcCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCC-----CCCeE
Confidence 56777888888888876 5789999999999999999999999998 4668899999999999999877 46779
Q ss_pred CHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCC
Q 010673 117 TLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAV 194 (504)
Q Consensus 117 ~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l 194 (504)
++++|+.++... +.++.+|+.||.|++|.|+.++| . .+. .++... .+++.++|+.+|.|+||.|
T Consensus 81 ~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~-~l~-------~~g~~~~~~~~~~~~~~~D~d~dg~i 146 (191)
T 1y1x_A 81 TFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRA-ALL-------SSGYQVSEQTFQALMRKFDRQRRGSL 146 (191)
T ss_dssp CHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHH-HHH-------TTSCCCCHHHHHHHHHHHCTTCSSSB
T ss_pred cHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHH-HHH-------HhCCCCCHHHHHHHHHHhCCCCCCeE
Confidence 999999877542 57999999999999999999988 5 331 122111 2678899999999999999
Q ss_pred CHHHHhhhhccCCCCCCCCCccccccccccCCcc--cHHHHHH
Q 010673 195 RPAELEDLFLTAPESPWDEAPYKDAAETTALGNL--TLKGFVS 235 (504)
Q Consensus 195 ~~~e~~~l~~~~p~~p~~~~~~~~~~~~~~~g~i--~~~~~l~ 235 (504)
+++||..++...+.+. ........+..|.| ++..|+.
T Consensus 147 ~~~eF~~~~~~~~~~~----~~F~~~D~d~dG~i~~~~~eF~~ 185 (191)
T 1y1x_A 147 GFDDYVELSIFVCRVR----NVFAFYDRERTGQVTFTFDTFIG 185 (191)
T ss_dssp CHHHHHHHHHHHHHHH----HHHHHHCTTCCSEEEEEHHHHHH
T ss_pred eHHHHHHHHHHHHHHH----HHHHHhCcCCCceEEeeHHHHHH
Confidence 9999998887542211 01122244567774 5667743
No 165
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=99.67 E-value=9.2e-17 Score=166.33 Aligned_cols=150 Identities=16% Similarity=0.168 Sum_probs=97.4
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCCCC--CCCccceEEEEEEEcCCCcEEEEEEecCChh--------hHhhhhhhhh
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSENY--APTTGEQYAVNVVDQPGGNKKTLILQEIPEE--------GVKKILSNKE 354 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~~~--~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~--------~~~~~~~~~~ 354 (504)
++|+++|.+|||||||+|+|++..+.... ++++.+.. ...+.+. + ..+.+||++|.+ .+... +..
T Consensus 4 ~~V~ivG~~nvGKStL~n~l~~~~~~~v~~~~g~T~d~~-~~~~~~~-~-~~~~l~DT~G~~~~~~~~~~~~~~~--~~~ 78 (436)
T 2hjg_A 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRI-YSSAEWL-N-YDFNLIDTGGIDIGDEPFLAQIRQQ--AEI 78 (436)
T ss_dssp CEEEEECSTTSSHHHHHHHHEEEECC-----------CE-EEECTTC-S-SCCEEEC---------CHHHHHHHH--HHH
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCceeecCCCCCccceE-EEEEEEC-C-ceEEEEECCCCCCcchhHHHHHHHH--HHH
Confidence 68999999999999999999998775432 33444422 2234444 3 467789999874 22222 255
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEecc
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak 434 (504)
+++.||++|+|+|++++.++.+ ..+...+. ..++|+++|+||+|+...... ..++. .+++..++++||+
T Consensus 79 ~~~~ad~il~vvD~~~~~~~~d-~~~~~~l~------~~~~pvilv~NK~D~~~~~~~---~~~~~-~lg~~~~~~iSA~ 147 (436)
T 2hjg_A 79 AMDEADVIIFMVNGREGVTAAD-EEVAKILY------RTKKPVVLAVNKLDNTEMRAN---IYDFY-SLGFGEPYPISGT 147 (436)
T ss_dssp HHHHCSEEEEEEETTTCSCHHH-HHHHHHHT------TCCSCEEEEEECCCC-----C---CCSSG-GGSSCCCEECBTT
T ss_pred HHHhCCEEEEEEeCCCCCCHHH-HHHHHHHH------HcCCCEEEEEECccCccchhh---HHHHH-HcCCCCeEEEeCc
Confidence 7899999999999999877654 22333333 247999999999998754221 11222 4566568999999
Q ss_pred c-cCHHHHHHHHHHHHh
Q 010673 435 S-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 435 ~-~gi~el~~~l~~~~~ 450 (504)
+ .|++++++.|.+.+.
T Consensus 148 ~g~gv~~L~~~i~~~l~ 164 (436)
T 2hjg_A 148 HGLGLGDLLDAVAEHFK 164 (436)
T ss_dssp TTBTHHHHHHHHHHTGG
T ss_pred CCCChHHHHHHHHHhcC
Confidence 9 999999999998875
No 166
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.67 E-value=8.5e-18 Score=153.83 Aligned_cols=144 Identities=17% Similarity=0.197 Sum_probs=118.9
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|++++++.++++|..||.|+||.|+.+||..++.. +|..++++++..+++.++.+ ++|.|++++|+.++...
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~-~g~~~~~~~~~~l~~~~D~d-----~dG~I~~~EF~~~~~~~ 75 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADID-----KSGTIDYGEFIAATVHL 75 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTT-TTCCCCHHHHHHHHHHTCTT-----CSSEECHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHcCCC-----CCCeEeHHHHHHHHHHH
Confidence 4578888999999999999999999999999998774 69999999999999999876 46669999999776533
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCC
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAP 207 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p 207 (504)
......+.+..+|+.||.|++|.|+.++| . .+. .. .++. +++.++|+.+|.|+||.|+++||..++...+
T Consensus 76 ~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~-~l~-~~----g~~~---~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 146 (188)
T 1s6i_A 76 NKLEREENLVSAFSYFDKDGSGYITLDEIQQ-ACK-DF----GLDD---IHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (188)
T ss_dssp SSSCCCCSTHHHHHHTTTTCSSEEEHHHHHH-TTT-TT----TCCT---THHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred hccCHHHHHHHHHHHHCCCCCCcCcHHHHHH-HHH-Hc----CCCH---HHHHHHHHHHCCCCCCcEeHHHHHHHHHHcC
Confidence 22334467999999999999999999999 6 331 11 1222 4688999999999999999999999987543
No 167
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.66 E-value=8e-17 Score=143.50 Aligned_cols=143 Identities=18% Similarity=0.216 Sum_probs=114.9
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|+++++..++++|..+|.|+||.|+.+|+..++.. +|.+++++++..++..++.+ ++|.|++++|+.++...
T Consensus 19 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~ef~~~~~~~ 92 (166)
T 2aao_A 19 ESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKR-VGANLKESEILDLMQAADVD-----NSGTIDYKEFIAATLHL 92 (166)
T ss_dssp HHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGG-GTCCCCHHHHHHHHHHHCTT-----CCSSBCHHHHHHHHTTC
T ss_pred HhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCeEcHHHHHHHHHHH
Confidence 3588999999999999999999999999999998775 69999999999999999876 46779999999776433
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
......+.++.+|+.+|.|++|.|+.++| . .+. .. .++ .+++.++|+.+|.|+||.|+++||..++...
T Consensus 93 ~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~-~l~-~~----~~~---~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 162 (166)
T 2aao_A 93 NKIEREDHLFAAFTYFDKDGSGYITPDELQQ-ACE-EF----GVE---DVRIEELMRDVDQDNDGRIDYNEFVAMMQKG 162 (166)
T ss_dssp HHHHTTHHHHHHHHHHCTTCSSSBCHHHHHH-HTC-C---------------CCHHHHHCTTCSSSBCHHHHHHHHC--
T ss_pred hhcccHHHHHHHHHHhCCCCCCcCcHHHHHH-HHH-Hc----CCC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 33334568999999999999999999998 5 331 11 111 3668889999999999999999999988753
No 168
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.66 E-value=5.1e-18 Score=148.29 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=110.9
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHh-hhhccCCcCCCCCCHHhHHHHHHHH--H--
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVV-QEKQHDGVNDLGLTLSGFLFLHALF--I-- 129 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~-~~~~~~~~~~~~i~~~~Fl~l~~~~--~-- 129 (504)
++++++++|..||.|+||.|+.+||..+++. +|.+++++++..++..+ +.+ ++|.|++++|+.++... .
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~~D~~-----~~g~i~~~eF~~~~~~~~~~~~ 75 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRA-IGYNPTNQLVQDIINADSSLR-----DASSLTLDQITGLIEVNEKELD 75 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHC--CC-------CCEEEHHHHHHHHHHTHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhhCCC-----CCCeEcHHHHHHHHHHHHhhcc
Confidence 4456899999999999999999999999875 69999999999999988 776 46679999999887765 2
Q ss_pred --hcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 130 --EKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 130 --~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.....+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|+||.|+++||..++.
T Consensus 76 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 76 ATTKAKTEDFVKAFQVFDKESTGKVSVGDLRY-ML-------TGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp GGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHH-HH-------HHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2345578999999999999999999988 5 33 1222222 26789999999999999999999998875
No 169
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.66 E-value=3e-17 Score=151.18 Aligned_cols=142 Identities=13% Similarity=0.169 Sum_probs=118.5
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|+++++..|+++|..||.|+||.|+.+||..+++ .+|..++.+++..++..+ +|.|+|++|+.++...
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~lg~~~~~~~~~~l~~~~---------~g~i~~~eF~~~~~~~ 118 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFD-SLGRLCTEQELDSMVAEA---------PGPINFTMFLTIFGDR 118 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHH-TTSCCCCHHHHHHHHTTS---------SSCCBHHHHHHHHHHC
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHc---------cCCCcHHHHHHHHHHH
Confidence 568899999999999999999999999999999977 579999999999888655 5679999999887654
Q ss_pred Hhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 129 IEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 129 ~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
+.. ...+.+..+|+.||.|++|.|+.++| . .+ ..+. .++ .+++..||+.+|.|+||.|+++||..++...
T Consensus 119 ~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~-~l--~~g~--~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 190 (196)
T 3dtp_E 119 IAGTDEEDVIVNAFNLFDEGDGKCKEETLKRS-LT--TWGE--KFS---QDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190 (196)
T ss_dssp CCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHH-HH--HSSS--CCC---HHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred hcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHH-HH--HcCC--CCC---HHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence 433 34468999999999999999999999 6 33 2111 122 2678899999999999999999999999876
Q ss_pred CC
Q 010673 207 PE 208 (504)
Q Consensus 207 p~ 208 (504)
|.
T Consensus 191 ~~ 192 (196)
T 3dtp_E 191 AK 192 (196)
T ss_dssp CB
T ss_pred Cc
Confidence 54
No 170
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.66 E-value=7.6e-17 Score=142.28 Aligned_cols=140 Identities=13% Similarity=0.194 Sum_probs=114.5
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++++.++++|..||.|+||.|+.+||..+++. +|..++.+++..++.. ++|.|++++|+.++..
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~---------~~g~i~~~eF~~~~~~ 78 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLKE---------APGPLNFTMFLSIFSD 78 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHH-HSSCCCHHHHHHHHTT---------SSSCCCHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHh---------CCCcCcHHHHHHHHHH
Confidence 35789999999999999999999999999999999875 5999999999988842 3677999999988876
Q ss_pred HHhcC-CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 128 FIEKG-RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 128 ~~~~~-~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
..... ..+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..||+.+|.| ||.|+++||..++.
T Consensus 79 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 79 KLSGTDSEETIRNAFAMFDEQETKKLNIEYIKD-LL-------ENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp HTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHH-HH-------HHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred HhcCCChHHHHHHHHHHHCcCCCCccCHHHHHH-HH-------HHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHh
Confidence 55433 4467999999999999999999988 5 33 1222222 26788999999999 99999999999887
Q ss_pred cC
Q 010673 205 TA 206 (504)
Q Consensus 205 ~~ 206 (504)
..
T Consensus 150 ~~ 151 (156)
T 1wdc_B 150 GS 151 (156)
T ss_dssp TS
T ss_pred cC
Confidence 54
No 171
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.66 E-value=1.6e-16 Score=145.23 Aligned_cols=144 Identities=12% Similarity=0.048 Sum_probs=117.9
Q ss_pred cCcchHHHHHHHHHhHhhh-cCCCCCccCHHHHHHHHHHHc---CCCCCHHHHHHHH-----------HHhhhhccCCcC
Q 010673 48 EQTLKPRCVRALKRIFIIC-DHDMDGALNDAELNEFQVKCF---NAPLQPAEIVGVK-----------RVVQEKQHDGVN 112 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~-D~d~dG~l~~~El~~~~~~~~---g~~~~~~e~~~~~-----------~~~~~~~~~~~~ 112 (504)
...+++++++.++++|..| |.|+||.|+.+|+..++..+. |.+++.+++..++ +.++.+ +
T Consensus 3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d-----~ 77 (191)
T 2ccm_A 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADEN-----E 77 (191)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-----C
T ss_pred hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-----C
Confidence 3568899999999999999 999999999999999988654 9999999999999 777766 4
Q ss_pred CCCCCHHhHHHHHHHHHhc---------CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHh
Q 010673 113 DLGLTLSGFLFLHALFIEK---------GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGI 182 (504)
Q Consensus 113 ~~~i~~~~Fl~l~~~~~~~---------~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~l 182 (504)
+|.|++++|+.++...... ...+.+..+|+.||.|++|.|+.+++ . .+ ..++ ...+.+.++
T Consensus 78 dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~-~l-------~~~g-~~~~~~~~~ 148 (191)
T 2ccm_A 78 DEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYST-VY-------MSYG-IPKSDCDAA 148 (191)
T ss_dssp SSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHH-HH-------HTTT-CCHHHHHHH
T ss_pred CCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHhC-CCHHHHHHH
Confidence 6779999999877654321 11246899999999999999999988 5 33 1122 112668899
Q ss_pred hhhhcCCCCCCCCHHHHhhhhcc
Q 010673 183 FGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 183 f~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
|+.+|.|+||.|+++||..++..
T Consensus 149 ~~~~D~d~dG~i~~~Ef~~~~~~ 171 (191)
T 2ccm_A 149 FDTLSDGGKTMVTREIFARLWTE 171 (191)
T ss_dssp HHHHTTTTTSCCBHHHHHHHHHH
T ss_pred HHHhCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999988764
No 172
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.66 E-value=5.7e-17 Score=152.21 Aligned_cols=139 Identities=14% Similarity=0.082 Sum_probs=117.1
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|+++++++++++|+.+|+|+||.|+.+||..+++. +|.++++++++.+++.++.+ ++|.|++++|+.++..
T Consensus 42 ~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~l~~~~D~d-----~dg~I~~~EF~~~~~~ 115 (220)
T 3sjs_A 42 LNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFP-GGIRLSPQTALRMMRIFDTD-----FNGHISFYEFMAMYKF 115 (220)
T ss_dssp GGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBG-GGBCCCHHHHHHHHHHHCTT-----CSSCBCHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHH
Confidence 45799999999999999999999999999999998774 59999999999999999877 5777999999988765
Q ss_pred HHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 128 FIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 128 ~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
. +.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+| |+||.|+++||.+++..
T Consensus 116 ~------~~l~~~F~~~D~d~~G~I~~~El~~-~l-------~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 180 (220)
T 3sjs_A 116 M------ELAYNLFVMNARARSGTLEPHEILP-AL-------QQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAF 180 (220)
T ss_dssp H------HHHHHHHHHHCCSSTTEECHHHHHH-HH-------HHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHH
T ss_pred H------HHHHHHHHHHCCCCCCCCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 3 57999999999999999999998 5 33 1222222 267889999999 99999999999998876
Q ss_pred CC
Q 010673 206 AP 207 (504)
Q Consensus 206 ~p 207 (504)
.+
T Consensus 181 l~ 182 (220)
T 3sjs_A 181 AA 182 (220)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 173
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.66 E-value=1e-16 Score=146.85 Aligned_cols=144 Identities=16% Similarity=0.123 Sum_probs=110.1
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHH-----HHHHHHcCCCCCHH-----HHHHHHHHhhhhccCCcCCCCCC
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELN-----EFQVKCFNAPLQPA-----EIVGVKRVVQEKQHDGVNDLGLT 117 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~-----~~~~~~~g~~~~~~-----e~~~~~~~~~~~~~~~~~~~~i~ 117 (504)
.+.+++++++.++++|..||.|+||.|+.+||. .+++ .+|.+++.. ++..+++.++.+ ++|.|+
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~-~~g~~~~~~~~~~~~~~~l~~~~D~d-----~~g~i~ 84 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICA-KLEATPEQTKRHQVCVEAFFRGCGME-----YGKEIA 84 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHH-HTTCCHHHHHHHHHHHHHHHHHTTCC-----TTCCBC
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHH-HcCCCccHHHHHHHHHHHHHHHcCCC-----CCceEc
Confidence 355699999999999999999999999999998 4544 579999887 688899888776 467799
Q ss_pred HHhHHHHHHHHHh-------cCCchhHH----HHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhh
Q 010673 118 LSGFLFLHALFIE-------KGRLETTW----AVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFG 184 (504)
Q Consensus 118 ~~~Fl~l~~~~~~-------~~~~e~~~----~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~ 184 (504)
+++|+.++..... ....+.+. .+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+
T Consensus 85 ~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~-~l-------~~~g~~~~~~~~~~~~~ 156 (195)
T 1qv0_A 85 FPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA-YG-------KISGISPSQEDCEATFR 156 (195)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHH-HH-------HHHSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHH
Confidence 9999987765433 12223344 8999999999999999988 5 32 1222222 367899999
Q ss_pred hhcCCCCCCCCHHHHhhhhcc
Q 010673 185 LYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 185 ~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.+|.|+||.|+++||..++..
T Consensus 157 ~~D~d~dg~i~~~eF~~~~~~ 177 (195)
T 1qv0_A 157 HCDLDNAGDLDVDEMTRQHLG 177 (195)
T ss_dssp HSCCCTTSCEEHHHHHHHHHH
T ss_pred HhCCCCCCcCCHHHHHHHHHH
Confidence 999999999999999887763
No 174
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.65 E-value=2.3e-17 Score=155.53 Aligned_cols=144 Identities=13% Similarity=0.040 Sum_probs=116.0
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHh---------hhhccCCcCCCCCCHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVV---------QEKQHDGVNDLGLTLS 119 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~---------~~~~~~~~~~~~i~~~ 119 (504)
..++++++..|+++|..||.|+||.|+.+||..++.+.+|..++.+++..++..+ +.+ ++|.|+++
T Consensus 43 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d-----~~G~I~~~ 117 (226)
T 2lvv_A 43 RDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVK-----GVGEEDLV 117 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHS-----CCCCCSCB
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCC-----CCCcCCHH
Confidence 4689999999999999999999999999999986677889999999999999888 766 46779999
Q ss_pred hHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH--HHHHHhhhhhcCCCCCCCCH
Q 010673 120 GFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV--EFLRGIFGLYDIDNDGAVRP 196 (504)
Q Consensus 120 ~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~--~~l~~lf~~~D~d~dG~l~~ 196 (504)
+|+.+..........+.++.+|+.||.|++|.|+.++| . .+. .++..+. ..+.++|+.+|.|+||.|++
T Consensus 118 EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~-~l~-------~~~~~g~~~~e~~~~~~~~D~d~dG~Is~ 189 (226)
T 2lvv_A 118 EFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKE-ALP-------KLKEWGVDITDATTVFNEIDTNGSGVVTF 189 (226)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHH-HHH-------HHHHHTCCCCSCHHHHHHHCCSCSSCEEH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHH-HHH-------HHhhcCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 99975322111122368999999999999999999988 5 321 1100011 23789999999999999999
Q ss_pred HHHhhhhcc
Q 010673 197 AELEDLFLT 205 (504)
Q Consensus 197 ~e~~~l~~~ 205 (504)
+||..++..
T Consensus 190 ~EF~~~~~~ 198 (226)
T 2lvv_A 190 DEFSCWAVT 198 (226)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 175
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.64 E-value=2.8e-16 Score=139.66 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=109.6
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHH---HHHcCCCCCHHHHHHHH-----------HHhhhhccCCcCCCCCCHHh
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQ---VKCFNAPLQPAEIVGVK-----------RVVQEKQHDGVNDLGLTLSG 120 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~---~~~~g~~~~~~e~~~~~-----------~~~~~~~~~~~~~~~i~~~~ 120 (504)
+++.++++|..+|.|+||.|+.+||..++ .+.+|.+++.+++..+. ..++.+ ++|.|++++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d-----~~g~i~~~e 76 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRD-----GDQRITREE 76 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-----SSSCEEHHH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-----CCCcCcHHH
Confidence 46789999999999999999999999975 34679999999998774 666655 466799999
Q ss_pred HHHHHHHHHhcCC-------chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCC
Q 010673 121 FLFLHALFIEKGR-------LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDG 192 (504)
Q Consensus 121 Fl~l~~~~~~~~~-------~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG 192 (504)
|+.++........ .+.++.+|+.||.|++|.|+.+++ . .+ ..++ ...+.+..+|+.+|.|+||
T Consensus 77 f~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~-~l-------~~~~-~~~~~~~~~~~~~D~d~dg 147 (166)
T 3akb_A 77 FVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTAR-AL-------TAFG-VPEDLARQAAAALDTDGDG 147 (166)
T ss_dssp HHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHH-HH-------HHTT-CCHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHhC-CCHHHHHHHHHHhCCCCCC
Confidence 9977765543221 234899999999999999999988 5 32 1222 1236788999999999999
Q ss_pred CCCHHHHhhhhcc
Q 010673 193 AVRPAELEDLFLT 205 (504)
Q Consensus 193 ~l~~~e~~~l~~~ 205 (504)
.|+++||..++..
T Consensus 148 ~i~~~ef~~~~~~ 160 (166)
T 3akb_A 148 KVGETEIVPAFAR 160 (166)
T ss_dssp BCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 9999999988753
No 176
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.64 E-value=1.2e-16 Score=145.61 Aligned_cols=143 Identities=15% Similarity=0.098 Sum_probs=113.8
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHH-----HHHHHHcCCCCCHH-----HHHHHHHHhhhhccCCcCCCCCCH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELN-----EFQVKCFNAPLQPA-----EIVGVKRVVQEKQHDGVNDLGLTL 118 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~-----~~~~~~~g~~~~~~-----e~~~~~~~~~~~~~~~~~~~~i~~ 118 (504)
..+++++++.++++|..||.|+||.|+.+||. .+++ .+|..++.+ +++.+++.++.+ ++|.|++
T Consensus 8 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~-~~g~~~~~~~~~~~~~~~l~~~~D~d-----~~g~i~~ 81 (191)
T 1uhk_A 8 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVIN-NLGATPEQAKRHKDAVEAFFGGAGMK-----YGVETDW 81 (191)
T ss_dssp CTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHTTCC-----TTCEEEH
T ss_pred ccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHhCcC-----CCCcCcH
Confidence 44588999999999999999999999999998 5544 679999988 688899888766 4666999
Q ss_pred HhHHHHHHHHHh-------cCCchhHH----HHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhh
Q 010673 119 SGFLFLHALFIE-------KGRLETTW----AVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGL 185 (504)
Q Consensus 119 ~~Fl~l~~~~~~-------~~~~e~~~----~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~ 185 (504)
++|+.++..... ....+.+. .+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.
T Consensus 82 ~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~-~l-------~~~g~~~~~~~~~~~~~~ 153 (191)
T 1uhk_A 82 PAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKA-YT-------KAAGIIQSSEDCEETFRV 153 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHHTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHH
Confidence 999987765443 22223343 8999999999999999988 5 32 1222222 2678999999
Q ss_pred hcCCCCCCCCHHHHhhhhcc
Q 010673 186 YDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 186 ~D~d~dG~l~~~e~~~l~~~ 205 (504)
+|.|+||.|+++||..++..
T Consensus 154 ~D~d~dG~i~~~eF~~~~~~ 173 (191)
T 1uhk_A 154 CDIDESGQLDVDEMTRQHLG 173 (191)
T ss_dssp SCCCTTSCEEHHHHHHHHHH
T ss_pred hCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999888774
No 177
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.9e-16 Score=143.66 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=88.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCC---CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhc--
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSEN---YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEAL-- 356 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~---~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~-- 356 (504)
...++|+|+|.+|||||||+++|++..+... ..+++... + ....+.+||++|.+.+...+ ..++
T Consensus 46 ~~~~~i~vvG~~g~GKSsll~~l~~~~~~~~~~~~~~~~~~~-------~--~~~~~~l~Dt~G~~~~~~~~--~~~~~~ 114 (193)
T 2ged_A 46 SYQPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAAD-------Y--DGSGVTLVDFPGHVKLRYKL--SDYLKT 114 (193)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHSSCC------------C-------C--CCTTCSEEEETTCCBSSCCH--HHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCCCcccccCCCceeee-------e--cCCeEEEEECCCCchHHHHH--HHHHHh
Confidence 5678999999999999999999999876542 22222211 1 22445689999986654443 2233
Q ss_pred --ccccEEEEEEeCC-CcccHHHHHHHHHHHHHhccC-CCCCCcEEEEEECCCCCCCccchHHHHHHHH
Q 010673 357 --ASCDVTIFVYDSS-DEYSWKRTKELLVEVARLGED-SGYGVPCLLIASKDDLKPYTMAVQDSARVTQ 421 (504)
Q Consensus 357 --~~ad~iilV~D~s-~~~s~~~~~~~~~~l~~~~~~-~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~ 421 (504)
..+|++++|||++ ++.++..+..|+..+...... ...++|+++|+||+|+.......+..+.+.+
T Consensus 115 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~ 183 (193)
T 2ged_A 115 RAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKDALES 183 (193)
T ss_dssp HGGGEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEECTTSTTCCCHHHHHHHHHH
T ss_pred hcccCCEEEEEEECCCCchhHHHHHHHHHHHHhhhhhccccCCCEEEEEEchHhcCCCCHHHHHHHHHH
Confidence 3499999999999 889999888888777653210 1358999999999999876655444444433
No 178
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=99.63 E-value=2e-15 Score=156.40 Aligned_cols=161 Identities=17% Similarity=0.208 Sum_probs=106.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhh----------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKI---------- 349 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~---------- 349 (504)
...++|+|+|++|||||||+|+|++..... ..++|+.+ .....+.++ | ..+.+||++|.......
T Consensus 178 ~~~~kvaivG~~gvGKSTLln~l~g~~~~~v~~~~gtT~d-~~~~~i~~~-g-~~~~l~Dt~G~~~~~~~~~~~~e~~~~ 254 (439)
T 1mky_A 178 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRD-PVDDEVFID-G-RKYVFVDTAGLRRKSRVEPRTVEKYSN 254 (439)
T ss_dssp CSCEEEEEECSTTSSHHHHHHHHHTSTTEEECCCC-------CCEEEEET-T-EEEEESSCSCC-----------CCSCC
T ss_pred ccCceEEEECCCCCCHHHHHHHHhCCcccccCCCCCCcCC-ceEEEEEEC-C-EEEEEEECCCCccccccchhhHHHHHH
Confidence 456999999999999999999999987632 23344443 222345666 4 35677898886432211
Q ss_pred hhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hH-HHHHHHHHh---C
Q 010673 350 LSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQ-DSARVTQEL---G 424 (504)
Q Consensus 350 ~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~-~~~~~~~~~---~ 424 (504)
.+...++..+|++++|+|+++..+..+ ..+...+... ++|+++|+||+|+.+.+.. .. ..+.+.+.+ +
T Consensus 255 ~~~~~~i~~ad~vllv~d~~~~~~~~~-~~i~~~l~~~------~~~~ilv~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 327 (439)
T 1mky_A 255 YRVVDSIEKADVVVIVLDATQGITRQD-QRMAGLMERR------GRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFID 327 (439)
T ss_dssp HHHHHHHHHCSEEEEEEETTTCCCHHH-HHHHHHHHHT------TCEEEEEEECGGGSTTGGGCHHHHHHHHHHHCGGGT
T ss_pred HHHHHHHhhCCEEEEEEeCCCCCCHHH-HHHHHHHHHc------CCCEEEEEECccCCCchhhHHHHHHHHHHHHhccCC
Confidence 112356788999999999998877765 2344444432 7999999999999765432 22 222333433 2
Q ss_pred CCCeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 425 IEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 425 ~~~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
..+++++||++ .|++++|+.+.+.+...
T Consensus 328 ~~~~~~~SA~~g~gv~~l~~~i~~~~~~~ 356 (439)
T 1mky_A 328 YSPLIFTSADKGWNIDRMIDAMNLAYASY 356 (439)
T ss_dssp TSCEEECBTTTTBSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHhh
Confidence 23589999999 99999999999877543
No 179
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.63 E-value=2.4e-17 Score=144.50 Aligned_cols=142 Identities=14% Similarity=0.173 Sum_probs=106.9
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
.|++++++.++++|..||.|+||.|+.+||..+++ .+|.+++.+++..++..++.+. .++|.|++++|+.++....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~---~~~g~i~~~eF~~~~~~~~ 78 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDE---LKSRRVDFETFLPMLQAVA 78 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHH-HTTCCCCHHHHHHHTTCCCHHH---HTTCEEEHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCcCc---CCCCcCcHHHHHHHHHHHh
Confidence 57899999999999999999999999999999987 4699999999999998876541 1255699999998876543
Q ss_pred h---cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 130 E---KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 130 ~---~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
. ....+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+| |+||.|+++||..++.
T Consensus 79 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 79 KNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRH-VL-------TTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp C--------CCHHHHHTTCTTSSSEEEHHHHHH-HH-------HHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred ccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHH-HH-------HHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 2 223467899999999999999999988 5 33 1222222 267899999999 9999999999998764
No 180
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.63 E-value=4.5e-17 Score=152.74 Aligned_cols=144 Identities=11% Similarity=0.090 Sum_probs=115.2
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHh---------hhhccCCcCCCCCCHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVV---------QEKQHDGVNDLGLTLS 119 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~---------~~~~~~~~~~~~i~~~ 119 (504)
..|++++++.++++|..||.|+||.|+.+||..+++..+|.+++.+++..++..+ +.+ ++|.|+++
T Consensus 40 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~g~I~~~ 114 (219)
T 3cs1_A 40 REKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLE-----NKGSEDFV 114 (219)
T ss_dssp CSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHH-----TSCCCSSB
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccC-----CCCcCCHH
Confidence 5688999999999999999999999999999999887789999999998877644 112 36679999
Q ss_pred hHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccCh-hHH-HHHHHhhhhhcCCCCCCCCH
Q 010673 120 GFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELAS-EAV-EFLRGIFGLYDIDNDGAVRP 196 (504)
Q Consensus 120 ~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~-~~~-~~l~~lf~~~D~d~dG~l~~ 196 (504)
+|+.++.........+.++.+|+.||.|++|.|+.++| . .+ ..++. ... +++.++|+.+|.|+||.|++
T Consensus 115 EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~-~l-------~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~ 186 (219)
T 3cs1_A 115 EFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKR-AV-------PKLEAWGAKVEDPAALFKELDKNGTGSVTF 186 (219)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHH-HH-------HHHHHHTCCCSCHHHHHHHHCTTSSSEEEH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhcccCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 99976543322223467999999999999999999988 5 32 11221 111 45789999999999999999
Q ss_pred HHHhhhhcc
Q 010673 197 AELEDLFLT 205 (504)
Q Consensus 197 ~e~~~l~~~ 205 (504)
+||..++..
T Consensus 187 ~EF~~~~~~ 195 (219)
T 3cs1_A 187 DEFAAWASA 195 (219)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
No 181
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.63 E-value=1.6e-16 Score=147.53 Aligned_cols=142 Identities=16% Similarity=0.137 Sum_probs=108.7
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCC--CCCHHHHHHHH-------HHhhhhccCCcCCCCCCHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNA--PLQPAEIVGVK-------RVVQEKQHDGVNDLGLTLS 119 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~--~~~~~e~~~~~-------~~~~~~~~~~~~~~~i~~~ 119 (504)
..|++++++.++++|..||.|+||.|+.+||..++.. +|. .++++++..++ +.++.+ ++|.|+++
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~~~~~~~~~~l~~~~~~lf~~~D~d-----~dg~i~~~ 101 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR-MRQLVNATDEQVEKMRDAVRVFFLHKGVE-----PVNGLLRE 101 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHTTCB-----TTTBEEGG
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HHhhcCCCHHHHHHHHHHHHHHHHHhCCC-----CCCeEcHH
Confidence 6789999999999999999999999999999999875 477 89999999999 888766 46679999
Q ss_pred hHHHHHH------H--HHhcC-C-chh-HHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhc
Q 010673 120 GFLFLHA------L--FIEKG-R-LET-TWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYD 187 (504)
Q Consensus 120 ~Fl~l~~------~--~~~~~-~-~e~-~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D 187 (504)
+|+.++. . .+... . .++ +..+|+.||.|++|.|+.++| . .+ ..++ ...+++.++|+.+|
T Consensus 102 EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~-~l-------~~~g-~~~~~~~~~~~~~D 172 (208)
T 2hpk_A 102 DWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKT-MM-------KAFD-VPQEAAYTFFEKAD 172 (208)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHH-HH-------HHTT-SCTTHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHhC-cCHHHHHHHHHHhC
Confidence 9998765 1 33222 1 234 788999999999999999998 5 33 1122 11256889999999
Q ss_pred CCCCCCCCHHHHhhhhcc
Q 010673 188 IDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 188 ~d~dG~l~~~e~~~l~~~ 205 (504)
.|+||.|+++||..++..
T Consensus 173 ~d~dG~I~~~EF~~~~~~ 190 (208)
T 2hpk_A 173 TDKSGKLERTELVHLFRK 190 (208)
T ss_dssp TTCCSSBCHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHHHH
Confidence 999999999999988863
No 182
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.62 E-value=1.5e-16 Score=162.57 Aligned_cols=174 Identities=18% Similarity=0.178 Sum_probs=133.3
Q ss_pred hhhheeeecccccCChhHHHHHhhhccccCCCcccccccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCC
Q 010673 10 EIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNA 89 (504)
Q Consensus 10 ~~~~~~~csa~~~~~~~~~~~~~~~~~~~p~~pl~~~~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~ 89 (504)
+.+.|+++.+.......+.-........ ......++++++++++++|..||.|+||.|+.+||..++.. +|.
T Consensus 272 EgdflLRvfs~k~iD~de~g~i~~~e~~-------~~~~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~-lg~ 343 (450)
T 3sg6_A 272 EGDTLVNRIELKGIDFKEDGNILGHKLE-------YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQ 343 (450)
T ss_dssp ETTEEEEEEEEEEESCCTTSTTTTTCBC-------CC---CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTC
T ss_pred ccchhhheeccccCCccccccchhhhhh-------hhhcccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCC
Confidence 5678888888776655543222111111 12346789999999999999999999999999999999885 699
Q ss_pred CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCC
Q 010673 90 PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQ 167 (504)
Q Consensus 90 ~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~ 167 (504)
.++.++++.+++.++.+ ++|.|+++||+.++..... ....+.++.+|+.||.|++|.|+.++| . .+
T Consensus 344 ~~s~eel~~Lf~~~D~D-----gdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~-~L------ 411 (450)
T 3sg6_A 344 NPTEAELQDMINEVDAD-----GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH-VM------ 411 (450)
T ss_dssp CCCHHHHHHHHHTTCTT-----SSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHH-HH------
T ss_pred CCCHHHHHHHHHHhccC-----CCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHH-HH------
Confidence 99999999999999877 4677999999988765443 344567999999999999999999999 5 33
Q ss_pred ccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 168 SVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 168 ~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
..++... .+++.++|+.+|.|+||.|+++||..++.
T Consensus 412 -~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 412 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp -HHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred -HHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 1222222 26788999999999999999999998875
No 183
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=99.62 E-value=9.5e-15 Score=138.74 Aligned_cols=165 Identities=14% Similarity=0.070 Sum_probs=103.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCC--CccceEEEEEEEcCCCcEEEEEEecCChhh--------Hhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAP--TTGEQYAVNVVDQPGGNKKTLILQEIPEEG--------VKKIL 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~--T~~~~~~~~~v~~~~~~~~~li~d~~g~~~--------~~~~~ 350 (504)
....++|+|+|.+|||||||+|+|++..+.....+ ++........+.+. + ..+.+||++|... ...+.
T Consensus 26 ~~~~~~i~lvG~~g~GKStlin~l~g~~~~~~~~~~~~~t~~~~~~~~~~~-~-~~i~liDTpG~~~~~~~~~~~~~~~~ 103 (239)
T 3lxx_A 26 RNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWK-E-TELVVVDTPGIFDTEVPNAETSKEII 103 (239)
T ss_dssp --CEEEEEEECCTTSSHHHHHHHHHTSCCSCC-------CCSCEEEEEEET-T-EEEEEEECCSCC-----CHHHHHHHH
T ss_pred CCCceEEEEECCCCCCHHHHHHHHcCCCcCccCCCCCceeeeEEEEEEEeC-C-ceEEEEECCCccCCCCCHHHHHHHHH
Confidence 45679999999999999999999999888555433 23333344445555 3 5678899998321 11121
Q ss_pred h-hhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-------HHHHHHHHH
Q 010673 351 S-NKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-------QDSARVTQE 422 (504)
Q Consensus 351 ~-~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-------~~~~~~~~~ 422 (504)
+ ....+..+|++|+|+|+++..... ..|+..+...... ....|+++|+||+|+....... +.++++.+.
T Consensus 104 ~~~~~~~~~~~~~l~v~d~~~~~~~~--~~~l~~~~~~~~~-~~~~~~iiv~nK~D~~~~~~~~~~i~~~~~~l~~l~~~ 180 (239)
T 3lxx_A 104 RCILLTSPGPHALLLVVPLGRYTEEE--HKATEKILKMFGE-RARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDI 180 (239)
T ss_dssp HHHHHTTTCCSEEEEEEETTCCSSHH--HHHHHHHHHHHHH-HHGGGEEEEEECGGGC------------CHHHHHHHHH
T ss_pred HHHHhcCCCCcEEEEEeeCCCCCHHH--HHHHHHHHHHhhh-hccceEEEEEeCCccCCcccHHHHHHhchHHHHHHHHH
Confidence 1 133557889999999998654421 2333333221000 1246999999999987654433 357788888
Q ss_pred hCCCCeEEEecc-----c-cCHHHHHHHHHHHHhC
Q 010673 423 LGIEPPIPVSMK-----S-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 423 ~~~~~~~~vSak-----~-~gi~el~~~l~~~~~~ 451 (504)
++.. ++.++.. + .++.+|++.+.+.+..
T Consensus 181 ~~~~-~~~~~~~~~~~~~~~~v~~ll~~i~~~~~~ 214 (239)
T 3lxx_A 181 FGDR-YCALNNKATGAEQEAQRAQLLGLIQRVVRE 214 (239)
T ss_dssp HSSS-EEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCE-EEEEECCCCccccHHHHHHHHHHHHHHHHH
Confidence 8876 7777654 4 6899999999888743
No 184
>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, translation; 2.80A {Escherichia coli} PDB: 3deg_C*
Probab=99.62 E-value=3.7e-15 Score=158.62 Aligned_cols=161 Identities=14% Similarity=0.215 Sum_probs=111.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCC-------CCC------CCccceEEEE--EEEc---CCCcEEEEEEecCChh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSE-------NYA------PTTGEQYAVN--VVDQ---PGGNKKTLILQEIPEE 344 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~-------~~~------~T~~~~~~~~--~v~~---~~~~~~~li~d~~g~~ 344 (504)
+..+|+|+|+.++|||||+++|+...-.. ... .+.+.++... .+.+ ++....+.+||++|+.
T Consensus 3 ~irnI~IiGh~d~GKTTLi~rLl~~tg~i~~~~~~~~~~D~~~~ErerGiTi~~~~~~~~~~~~~g~~~~l~liDTPGh~ 82 (599)
T 3cb4_D 3 NIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHV 82 (599)
T ss_dssp TEEEEEEECCC----CCHHHHHHHHTTC--------------------------CEEEEEEECTTSCEEEEEEEECCCCG
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcCCcccccccccccccchhhhcccceeeeeEEEEEEecCCCCeEEEEEEECCCch
Confidence 56799999999999999999998632110 000 0112222211 1222 3234567789999998
Q ss_pred hHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhC
Q 010673 345 GVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELG 424 (504)
Q Consensus 345 ~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~ 424 (504)
.+.... ...+..+|++|+|+|+++..+++....|..... . ++|+++|+||+|+.... .....+++.+.++
T Consensus 83 dF~~ev--~~~l~~aD~aILVVDa~~gv~~qt~~~~~~~~~-~------~ipiIvViNKiDl~~a~-~~~v~~ei~~~lg 152 (599)
T 3cb4_D 83 DFSYEV--SRSLAACEGALLVVDAGQGVEAQTLANCYTAME-M------DLEVVPVLNKIDLPAAD-PERVAEEIEDIVG 152 (599)
T ss_dssp GGHHHH--HHHHHHCSEEEEEEETTTCCCTHHHHHHHHHHH-T------TCEEEEEEECTTSTTCC-HHHHHHHHHHHTC
T ss_pred HHHHHH--HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHH-C------CCCEEEeeeccCccccc-HHHHHHHHHHHhC
Confidence 876654 457889999999999999988888777766543 2 78999999999998643 2335677777777
Q ss_pred CC--CeEEEeccc-cCHHHHHHHHHHHHhCCC
Q 010673 425 IE--PPIPVSMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 425 ~~--~~~~vSak~-~gi~el~~~l~~~~~~~~ 453 (504)
+. +++++||++ .|++++++.|.+.+..|.
T Consensus 153 ~~~~~vi~vSAktg~GI~~Ll~~I~~~lp~p~ 184 (599)
T 3cb4_D 153 IDATDAVRCSAKTGVGVQDVLERLVRDIPPPE 184 (599)
T ss_dssp CCCTTCEEECTTTCTTHHHHHHHHHHHSCCCC
T ss_pred CCcceEEEeecccCCCchhHHHHHhhcCCCcc
Confidence 74 589999999 999999999999876554
No 185
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=99.62 E-value=2.1e-15 Score=145.09 Aligned_cols=165 Identities=14% Similarity=0.094 Sum_probs=104.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCC-CCCCC-ccceEEEEEEEcCCCcEEEEEEecCChhhHhh--------hh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSE-NYAPT-TGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK--------IL 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~-~~~~T-~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~--------~~ 350 (504)
....++|+|+|.+|||||||+|+|++..... ...++ +........+... + ..+.+||++|...... +.
T Consensus 19 ~~~~~~I~lvG~~g~GKStl~n~l~~~~~~~~~~~~~~~t~~~~~~~~~~~-~-~~i~iiDTpG~~~~~~~~~~~~~~i~ 96 (260)
T 2xtp_A 19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWG-N-REIVIIDTPDMFSWKDHCEALYKEVQ 96 (260)
T ss_dssp --CCEEEEEEECTTSCHHHHHHHHHTSCCSCCCTTSCCCCCSCEEEEEEET-T-EEEEEEECCGGGGSSCCCHHHHHHHH
T ss_pred CCCceEEEEECCCCCCHHHHHHHHhCCCCcccCCCCCceeeeeEEEEEEeC-C-CEEEEEECcCCCCCCCCHHHHHHHHH
Confidence 3457899999999999999999999987433 33332 2222333345554 3 5688899999744311 11
Q ss_pred -hhhhhcccccEEEEEEeCCCcccH-HHHHHHHHHHHHhccCCCCCCcEEEEEE-CCCCCCCccch-------HHHHHHH
Q 010673 351 -SNKEALASCDVTIFVYDSSDEYSW-KRTKELLVEVARLGEDSGYGVPCLLIAS-KDDLKPYTMAV-------QDSARVT 420 (504)
Q Consensus 351 -~~~~~~~~ad~iilV~D~s~~~s~-~~~~~~~~~l~~~~~~~~~~~piilV~N-K~Dl~~~~~~~-------~~~~~~~ 420 (504)
....+++.+|++|+|+|+++.... ..+..++..+... ....|+++|+| |+|+....... ..+..+.
T Consensus 97 ~~~~~~~~~~d~il~V~d~~~~~~~~~~~~~~l~~~~~~----~~~~~~i~vv~nK~Dl~~~~~~~~i~~~~~~~~~~~~ 172 (260)
T 2xtp_A 97 RCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGE----DAMGHTIVLFTHKEDLNGGSLMDYMHDSDNKALSKLV 172 (260)
T ss_dssp HHHHHHTTCCSEEEEEEETTCCCHHHHHHHHHHHHHHCG----GGGGGEEEEEECGGGGTTCCHHHHHHHCCCHHHHHHH
T ss_pred HHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHHHHHHhCc----hhhccEEEEEEcccccCCccHHHHHHhcchHHHHHHH
Confidence 112367899999999999863222 2223344433211 11356666666 99998542111 2244466
Q ss_pred HHhCCC----CeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 421 QELGIE----PPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 421 ~~~~~~----~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
..++.. ..+++||++ .|++++|+.|.+.+..
T Consensus 173 ~~~~~~~~~~~~~~~SA~~~~gv~~l~~~i~~~~~~ 208 (260)
T 2xtp_A 173 AACGGRICAFNNRAEGSNQDDQVKELMDCIEDLLME 208 (260)
T ss_dssp HHTTTCEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCeEEEecCcccccccHHHHHHHHHHHHHHHHh
Confidence 666532 127899999 9999999999998854
No 186
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.62 E-value=4.3e-16 Score=141.00 Aligned_cols=140 Identities=12% Similarity=0.150 Sum_probs=114.1
Q ss_pred chHHHHHHHHHhHhhh-cCCCCCccCHHHHHHHHHHHcC----CCCCHHHHHHH-----------HHHhhhhccCCcCCC
Q 010673 51 LKPRCVRALKRIFIIC-DHDMDGALNDAELNEFQVKCFN----APLQPAEIVGV-----------KRVVQEKQHDGVNDL 114 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~-D~d~dG~l~~~El~~~~~~~~g----~~~~~~e~~~~-----------~~~~~~~~~~~~~~~ 114 (504)
|++++++.++++|..| |.|+||.|+.+|+..++.. ++ .+++.+++..+ ++.++.+ ++|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d-----~dG 75 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTR-YKEVNKGSLSDADYKSMQASLEDEWRDLKGRADIN-----KDD 75 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTT-----CSS
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-----CCC
Confidence 6789999999999999 9999999999999998775 46 89999999876 7777666 467
Q ss_pred CCCHHhHHHHHHHHHhc---------CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhh
Q 010673 115 GLTLSGFLFLHALFIEK---------GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFG 184 (504)
Q Consensus 115 ~i~~~~Fl~l~~~~~~~---------~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~ 184 (504)
.|++++|+.++...... ...+.+..+|+.||.|++|.|+.+++ . .+. ..+ ++ .+.+.++|+
T Consensus 76 ~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~-~l~-~~g----~~---~~~~~~~~~ 146 (185)
T 2sas_A 76 VVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQN-YCK-NFQ----LQ---CADVPAVYN 146 (185)
T ss_dssp CEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHH-HTT-SSC----CC---CSSHHHHHH
T ss_pred eEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHH-HHH-HhC----CC---HHHHHHHHH
Confidence 79999999887765432 11257899999999999999999988 5 331 111 11 245889999
Q ss_pred hhcCCCCCCCCHHHHhhhhcc
Q 010673 185 LYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 185 ~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.+|.|+||.|+++||..++..
T Consensus 147 ~~D~d~dG~i~~~ef~~~~~~ 167 (185)
T 2sas_A 147 VITDGGKVTFDLNRYKELYYR 167 (185)
T ss_dssp HHHTTTTSCCSHHHHHHHHHH
T ss_pred HhcCCCCCcCcHHHHHHHHHH
Confidence 999999999999999988874
No 187
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.62 E-value=9.6e-17 Score=139.41 Aligned_cols=135 Identities=17% Similarity=0.197 Sum_probs=110.1
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH-
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI- 129 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~- 129 (504)
||+++ ++++|..+|.|+||.|+.+||..+++. +|.+++.+++..++.. + ++|.|++++|+.++....
T Consensus 2 ls~~e---l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~---~-----~~g~i~~~eF~~~~~~~~~ 69 (145)
T 2bl0_B 2 ASADQ---IQECFQIFDKDNDGKVSIEELGSALRS-LGKNPTNAELNTIKGQ---L-----NAKEFDLATFKTVYRKPIK 69 (145)
T ss_dssp CCHHH---HHHHHHHHCTTCSSCEEGGGHHHHHHH-TTCCCCHHHHHHHHHH---H-----TSSEECHHHHHHHHTSCCC
T ss_pred CCHHH---HHHHHHHhCCCCcCccCHHHHHHHHHH-hCCCCCHHHHHHHHHh---c-----CCCeEcHHHHHHHHHHHhh
Confidence 56666 999999999999999999999999875 5999999999999887 3 366799999998775432
Q ss_pred -hcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 130 -EKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 130 -~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.....+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|+||.|+++||..++..
T Consensus 70 ~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~-~l-------~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 70 TPTEQSKEMLDAFRALDKEGNGTIQEAELRQ-LL-------LNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp CGGGGHHHHHHHHHHHCSSSSSEEEHHHHHH-HH-------HHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCCCeEcHHHHHH-HH-------HHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 1223467999999999999999999988 5 33 1222222 267889999999999999999999998874
No 188
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.62 E-value=7.3e-16 Score=138.60 Aligned_cols=152 Identities=13% Similarity=0.133 Sum_probs=120.1
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcC-------CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFN-------APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g-------~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
++++++++|..+| |+||.|+.+||..+++.++| .+++++++..+++.++.+ ++|.|++++|+.++..
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~eF~~~~~~ 75 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD-----TTGKLGFEEFKYLWNN 75 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHHH
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCC-----CCCccCHHHHHHHHHH
Confidence 6789999999999 99999999999999988767 789999999999999877 4677999999987764
Q ss_pred HHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 128 FIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 128 ~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.+.++.+|+.||.|++|.|+.++| . .+ ..++... .+.+..+|+.+| |+||.|+++||..++..
T Consensus 76 ------~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 76 ------IKKWQAIYKQFDVDRSGTIGSSELPG-AF-------EAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ------HHHHHHHHHHHCTTCCSSBCTTTHHH-HH-------HHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHCCCCCCCCCHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 257999999999999999999999 5 33 1222221 267889999999 99999999999888765
Q ss_pred CCCCCCCCCccccccccccCCcccHH
Q 010673 206 APESPWDEAPYKDAAETTALGNLTLK 231 (504)
Q Consensus 206 ~p~~p~~~~~~~~~~~~~~~g~i~~~ 231 (504)
...+. ........+..|.|+..
T Consensus 141 ~~~~~----~~F~~~D~d~~G~i~~~ 162 (173)
T 1alv_A 141 LDAMF----RAFKSLDKDGTGQIQVN 162 (173)
T ss_dssp HHHHH----HHHHHHSSSCCSEEEEE
T ss_pred HHHHH----HHHHHhCCCCCCeecHh
Confidence 32111 01122345667888864
No 189
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.61 E-value=3.4e-16 Score=165.30 Aligned_cols=141 Identities=16% Similarity=0.079 Sum_probs=119.5
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc-------CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHH
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCF-------NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF 123 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~-------g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~ 123 (504)
++++++++++++|..||+|+||.|+.+||..+++.+. |..+++++++.+++.+|.+ ++|.|+++||+.
T Consensus 349 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d-----~dG~I~~~EF~~ 423 (504)
T 3q5i_A 349 TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFD-----KNGYIEYSEFIS 423 (504)
T ss_dssp SCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTT-----CSSSEEHHHHHH
T ss_pred CcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCC-----CCCcEeHHHHHH
Confidence 4889999999999999999999999999999877542 6688999999999999887 577799999998
Q ss_pred HHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhh
Q 010673 124 LHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDL 202 (504)
Q Consensus 124 l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l 202 (504)
++.........+++..+|+.||.|++|.|+.++| . .+.. ..++ .+++.++|+.+|.|+||.|+++||.++
T Consensus 424 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~-~l~~-----~~~~---~~~~~~~~~~~D~d~dG~I~~~EF~~~ 494 (504)
T 3q5i_A 424 VCMDKQILFSEERLRRAFNLFDTDKSGKITKEELAN-LFGL-----TSIS---EKTWNDVLGEADQNKDNMIDFDEFVSM 494 (504)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHH-HTTC-----SCCC---HHHHHHHHHTTCSSCSSSEEHHHHHHH
T ss_pred HHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHH-HHhh-----CCCC---HHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 8765545556688999999999999999999999 6 3311 1122 367899999999999999999999998
Q ss_pred hcc
Q 010673 203 FLT 205 (504)
Q Consensus 203 ~~~ 205 (504)
+..
T Consensus 495 ~~~ 497 (504)
T 3q5i_A 495 MHK 497 (504)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 190
>1s0u_A EIF-2-gamma, translation initiation factor 2 gamma subunit; GTPase, EF-1A, tRNA; 2.40A {Methanocaldococcus jannaschii} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=99.61 E-value=2.7e-14 Score=146.46 Aligned_cols=163 Identities=17% Similarity=0.170 Sum_probs=102.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCC---CCCCCC--CccceEEEEEEEc-------------CC-C-----cEEEEE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPF---SENYAP--TTGEQYAVNVVDQ-------------PG-G-----NKKTLI 337 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~---~~~~~~--T~~~~~~~~~v~~-------------~~-~-----~~~~li 337 (504)
...++|+++|..++|||||+++|++... .....+ |+...+....+.. ++ + ...+.+
T Consensus 6 ~~~~~I~iiG~~d~GKSTLi~~L~g~~~~~~~~e~~~giTi~~~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~~~i~i 85 (408)
T 1s0u_A 6 QAEVNIGMVGHVDHGKTSLTKALTGVWTDRHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNCLAETEFLRRVSF 85 (408)
T ss_dssp CCCEEEEEESCTTSSHHHHHHHHHSCCCCC-------CCCCCCEEEEEEEEECTTTCCEESSSBCTTSCCBCEEEEEEEE
T ss_pred CCceEEEEEcCCCCCHHHHHHHHhCCccccCcccccCCcEEEecccccccccccccccccccccccccCcccccccEEEE
Confidence 4568999999999999999999996542 222223 5544444333321 10 1 156778
Q ss_pred EecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc---hH
Q 010673 338 LQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA---VQ 414 (504)
Q Consensus 338 ~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~---~~ 414 (504)
||++|++.+.... ...+..+|++|+|+|++++.+.....+.+..+... ...|+++|+||+|+...... .+
T Consensus 86 iDtPGh~~f~~~~--~~~~~~~D~~ilVvda~~g~~~~qt~e~l~~~~~l-----~~~~iivv~NK~Dl~~~~~~~~~~~ 158 (408)
T 1s0u_A 86 VDSPGHETLMATM--LSGASLMDGAILVIAANEPCPQPQTKEHLMALEIL-----GIDKIIIVQNKIDLVDEKQAEENYE 158 (408)
T ss_dssp EECSSHHHHHHHH--HTTCSCCSEEEEEEETTSCSSCHHHHHHHHHHHHT-----TCCCEEEEEECTTSSCTTTTTTHHH
T ss_pred EECCCHHHHHHHH--HHhHhhCCEEEEEEECCCCCCCchhHHHHHHHHHc-----CCCeEEEEEEccCCCCHHHHHHHHH
Confidence 9999998775443 45677899999999999653222222222333322 24589999999999875432 23
Q ss_pred HHHHHHHHh---CCCCeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 415 DSARVTQEL---GIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 415 ~~~~~~~~~---~~~~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++.++++.+ +. +++++||++ .|+++|++.|.+.+..|
T Consensus 159 ~i~~~l~~~~~~~~-~~i~vSA~~g~gi~~L~~~l~~~i~~~ 199 (408)
T 1s0u_A 159 QIKEFVKGTIAENA-PIIPISAHHEANIDVLLKAIQDFIPTP 199 (408)
T ss_dssp HHHHHHTTSTTTTC-CEEEC------CHHHHHHHHHHHSCCC
T ss_pred HHHHHHhhcCCCCC-eEEEeeCCCCCCHHHHHHHHHHhCCCC
Confidence 555665543 33 489999999 99999999999877544
No 191
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.61 E-value=1.2e-15 Score=160.42 Aligned_cols=142 Identities=17% Similarity=0.097 Sum_probs=105.5
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHH---HcCCCCC----------HHHHHHHHHHhhhhccCCcCCCCCC
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVK---CFNAPLQ----------PAEIVGVKRVVQEKQHDGVNDLGLT 117 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~---~~g~~~~----------~~e~~~~~~~~~~~~~~~~~~~~i~ 117 (504)
+++++++.++++|..||.|+||.|+.+||..++.. .+|..++ +++++.+++.+|.+ ++|.|+
T Consensus 325 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d-----~dG~I~ 399 (486)
T 3mwu_A 325 TTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMD-----GSGSIE 399 (486)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTT-----CCSSBC
T ss_pred ccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCC-----CCCcCc
Confidence 37888999999999999999999999999554432 4577776 89999999999887 577799
Q ss_pred HHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCC
Q 010673 118 LSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVR 195 (504)
Q Consensus 118 ~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~ 195 (504)
++||+..+.........++++.+|+.||.|++|.|+.++| . .+ ..++.... +++.++|+.+|.|+||.|+
T Consensus 400 ~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~-~l-------~~~g~~~~~~~~~~~~~~~D~d~dG~I~ 471 (486)
T 3mwu_A 400 YSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFK-LF-------SQADSSIQMEELESIIEQVDNNKDGEVD 471 (486)
T ss_dssp HHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC----------------------------CCCCSSCSSSBC
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhCCCCCCcEe
Confidence 9999876543333344578999999999999999999999 6 33 12333233 7789999999999999999
Q ss_pred HHHHhhhhcc
Q 010673 196 PAELEDLFLT 205 (504)
Q Consensus 196 ~~e~~~l~~~ 205 (504)
++||.+++..
T Consensus 472 ~~EF~~~~~~ 481 (486)
T 3mwu_A 472 FNEFVEMLQN 481 (486)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 192
>3izy_P Translation initiation factor IF-2, mitochondrial; E coli, RNA, ribosomal; 10.80A {Bos taurus}
Probab=99.61 E-value=3.7e-17 Score=171.50 Aligned_cols=161 Identities=16% Similarity=0.163 Sum_probs=114.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
+.++|+++|++|+|||||+++|.+..+.....++++..+....+.++++ ..+.+||++|++.+..+. ..++..+|++
T Consensus 3 r~pkV~IvG~~~vGKTSLl~~L~~~~~~~~~~~giT~~i~~~~v~~~~g-~~i~~iDTPGhe~f~~~~--~~~~~~aD~v 79 (537)
T 3izy_P 3 RSPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSG-EKITFLDTPGHAAFSAMR--ARGTQVTDIV 79 (537)
T ss_dssp CCCBCEEEESTTTTHHHHHHHHHHHHHHHSSSCCBCCCTTSCCBCSSCS-SCCBCEECSSSCCTTTSB--BSSSBSBSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcccccCCceeEEEeEEEEEeCCC-CEEEEEECCChHHHHHHH--HHHHccCCEE
Confidence 4578999999999999999999988776555554444333334555423 467789999998887765 4578999999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc--hHHHHHH---HHHhCC-CCeEEEeccc-
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA--VQDSARV---TQELGI-EPPIPVSMKS- 435 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~--~~~~~~~---~~~~~~-~~~~~vSak~- 435 (504)
|+|+|+++....+... ++..+.. .++|+++|+||+|+...... ......+ +..++. .+++++||++
T Consensus 80 ILVVDa~dg~~~qt~e-~l~~~~~------~~vPiIVViNKiDl~~~~~~~v~~~l~~~~~~~e~~~~~~~iv~vSAktG 152 (537)
T 3izy_P 80 ILVVAADDGVMKQTVE-SIQHAKD------AHVPIVLAINKCDKAEADPEKVKKELLAYDVVCEDYGGDVQAVHVSALTG 152 (537)
T ss_dssp EEECBSSSCCCHHHHH-HHHHHHT------TTCCEEECCBSGGGTTTSCCSSSSHHHHTTSCCCCSSSSEEECCCCSSSS
T ss_pred EEEEECCCCccHHHHH-HHHHHHH------cCCcEEEEEecccccccchHHHHHHHHhhhhhHHhcCCCceEEEEECCCC
Confidence 9999999987766543 3344443 37899999999999753321 1122211 111211 1479999999
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 010673 436 KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 436 ~gi~el~~~l~~~~~~~~ 453 (504)
.|++++++.|...+..+.
T Consensus 153 ~GI~eLle~I~~l~~~~~ 170 (537)
T 3izy_P 153 ENMMALAEATIALAEMLE 170 (537)
T ss_dssp CSSHHHHHHHHHHHTTCC
T ss_pred CCchhHHHHHHHhhhccc
Confidence 999999999999876443
No 193
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.61 E-value=1.3e-15 Score=140.82 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=118.2
Q ss_pred hHHHHHHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh
Q 010673 52 KPRCVRALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE 130 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~ 130 (504)
|.-..++++++|..||.| +||.|+.+||..+++ .+|.+++.+++..+++.+|.+ ++|.|++++|+.++.....
T Consensus 17 t~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~f~~~D~d-----~~G~i~~~Ef~~~~~~~~~ 90 (204)
T 1jba_A 17 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFK-VPDNEEATQYVEAMFRAFDTN-----GDNTIDFLEYVAALNLVLR 90 (204)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHH-CCSSSTTHHHHHHHHHHHCCS-----SSSEECHHHHHHHHHHHSS
T ss_pred cCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHH-HhcCCCcHHHHHHHHHHHcCC-----CCCeEeHHHHHHHHHHHcc
Confidence 345667889999999999 899999999999977 568899999999999999876 4666999999988776544
Q ss_pred cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCC---CC-cccc------Ch-hHHHHHHHhhhhhcCCCCCCCCHHH
Q 010673 131 KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSP---DQ-SVEL------AS-EAVEFLRGIFGLYDIDNDGAVRPAE 198 (504)
Q Consensus 131 ~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~---~~-~~~l------~~-~~~~~l~~lf~~~D~d~dG~l~~~e 198 (504)
....+++..+|+.||.|++|.|+.++| . .+..-. +. .... .. ...+.+.++|+.+|.|+||.|+++|
T Consensus 91 ~~~~~~~~~~F~~~D~d~~G~I~~~E~~~-~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~E 169 (204)
T 1jba_A 91 GTLEHKLKWTFKIYDKDRNGCIDRQELLD-IVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE 169 (204)
T ss_dssp CCCTHHHHHHHHHHCSSCSSCBCHHHHHH-HHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCcCcHHHHHH-HHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHH
Confidence 455678999999999999999999988 5 321000 00 0000 00 1236789999999999999999999
Q ss_pred HhhhhccCCC
Q 010673 199 LEDLFLTAPE 208 (504)
Q Consensus 199 ~~~l~~~~p~ 208 (504)
|..++...|.
T Consensus 170 f~~~~~~~~~ 179 (204)
T 1jba_A 170 FVEGARRDKW 179 (204)
T ss_dssp HHHHHTTTTT
T ss_pred HHHHHHcChH
Confidence 9999987655
No 194
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.60 E-value=1.5e-16 Score=146.90 Aligned_cols=146 Identities=15% Similarity=0.167 Sum_probs=112.4
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++++.|+++|..||.|+||.|+.+||..+ +.+|.+++ +..++..++.+ ++|.|++++|+.++..
T Consensus 20 ~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~--~~lg~~~~---~~~l~~~~D~d-----~dg~i~~~EF~~~~~~ 89 (202)
T 2bec_A 20 ETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI--GALAVNPL---GDRIIESFFPD-----GSQRVDFPGFVRVLAH 89 (202)
T ss_dssp HHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC--HHHHHSTT---HHHHHHTTSCS-----SCCCCCHHHHHHHHGG
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH--HhcCCCcc---HHHHHHHhCCC-----CCCcCcHHHHHHHHHH
Confidence 34689999999999999999999999999999998 45687776 88888888766 4677999999987754
Q ss_pred HHh-----------------cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcC
Q 010673 128 FIE-----------------KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDI 188 (504)
Q Consensus 128 ~~~-----------------~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~ 188 (504)
... ....+.++.+|+.||.|++|.|+.++| . .+..-.+. .++.... ..+..+|+.+|.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~-~l~~~~g~--~~~~~~~~~~~~~~~~~~D~ 166 (202)
T 2bec_A 90 FRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQ-VLRLMVGV--QVTEEQLENIADRTVQEADE 166 (202)
T ss_dssp GSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHH-HHHHSCCS--CCCHHHHHHHHHHHHHHHCS
T ss_pred hcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHH-HHHHhcCC--CCCHHHHHHHHHHHHHHcCC
Confidence 432 122357999999999999999999998 5 33111011 2333332 444455666999
Q ss_pred CCCCCCCHHHHhhhhccC
Q 010673 189 DNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 189 d~dG~l~~~e~~~l~~~~ 206 (504)
|+||.|+++||..++...
T Consensus 167 d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 167 DGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp SCSSSEEHHHHHHTTTTS
T ss_pred CCCCcCcHHHHHHHHHHh
Confidence 999999999999988754
No 195
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*
Probab=99.60 E-value=6.8e-15 Score=153.72 Aligned_cols=160 Identities=14% Similarity=0.169 Sum_probs=107.2
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCC----C---CCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERP----F---SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKE 354 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~----~---~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~ 354 (504)
-..++|+++|.+++|||||+++|++.. . .....+.+........+.++ + ..+.+||++|++.+.... ..
T Consensus 17 m~~~~I~iiG~~d~GKSTLi~~L~~~~~~~~~d~~~~e~~~GiTi~~~~~~~~~~-~-~~i~iiDtPGh~~~~~~~--~~ 92 (482)
T 1wb1_A 17 FKNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLE-N-YRITLVDAPGHADLIRAV--VS 92 (482)
T ss_dssp CEEEEEEEEECTTSSHHHHHHHHHTTC--------------------CCCEEEET-T-EEEEECCCSSHHHHHHHH--HH
T ss_pred CCCCEEEEECCCCChHHHHHHHHHCCCcccccccccccccCccEEecceEEEEEC-C-EEEEEEECCChHHHHHHH--HH
Confidence 346899999999999999999999876 1 11121111111112224444 3 677889999997765443 45
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc---hHHHHHHHHHh-CC--CCe
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA---VQDSARVTQEL-GI--EPP 428 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~---~~~~~~~~~~~-~~--~~~ 428 (504)
.+..+|++|+|+|+++...-+. .+.+..+... ++|+++|+||+|+...... .+++.++++.. ++ .++
T Consensus 93 ~~~~aD~~ilVvda~~g~~~qt-~e~l~~~~~~------~ip~IvviNK~Dl~~~~~~~~~~~~l~~~l~~~~~~~~~~i 165 (482)
T 1wb1_A 93 AADIIDLALIVVDAKEGPKTQT-GEHMLILDHF------NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSI 165 (482)
T ss_dssp HTTSCCEEEEEEETTTCSCHHH-HHHHHHHHHT------TCCBCEEEECTTSSCHHHHHHHHHHHHHHHHHSSSGGGCCE
T ss_pred HHhhCCEEEEEEecCCCccHHH-HHHHHHHHHc------CCCEEEEEECCCcccchhHHHHHHHHHHHHhhhcccccceE
Confidence 7889999999999998432222 2223333333 7899999999999864322 22555666655 32 248
Q ss_pred EEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 429 IPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 429 ~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
+++||++ .|++++++.|.+.+..|
T Consensus 166 i~vSA~~g~gI~~L~~~L~~~i~~~ 190 (482)
T 1wb1_A 166 IPISAKTGFGVDELKNLIITTLNNA 190 (482)
T ss_dssp EECCTTTCTTHHHHHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHHHhhcCc
Confidence 9999999 99999999999987543
No 196
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.60 E-value=7.4e-16 Score=140.59 Aligned_cols=156 Identities=15% Similarity=0.121 Sum_probs=119.2
Q ss_pred ccCcchHHHHHHHHHh-----------HhhhcCC-CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCC
Q 010673 47 DEQTLKPRCVRALKRI-----------FIICDHD-MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDL 114 (504)
Q Consensus 47 ~~~~l~~~~~~~l~~~-----------F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~ 114 (504)
..+.|++++++.++++ |..||.| +||.|+.+|+..++..+.+...+.+++..+++.++.+ ++|
T Consensus 4 ~~~~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d-----~~G 78 (190)
T 2l2e_A 4 SQSKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDAD-----KNG 78 (190)
T ss_dssp SSCCSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSS-----STT
T ss_pred ccccCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCC-----CCC
Confidence 3456777777766666 9999999 8999999999999887756667788999999999877 467
Q ss_pred CCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC---CCCcccc--C-hhHHHHHHHhhhhhc
Q 010673 115 GLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS---PDQSVEL--A-SEAVEFLRGIFGLYD 187 (504)
Q Consensus 115 ~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~---~~~~~~l--~-~~~~~~l~~lf~~~D 187 (504)
.|++++|+.++.........+++..+|+.||.|++|.|+.+++ . .+..- .+....+ + ....+.+.++|+.+|
T Consensus 79 ~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D 157 (190)
T 2l2e_A 79 YIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLR-IVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMD 157 (190)
T ss_dssp CEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHH-HHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHT
T ss_pred eEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHH-HHHHHHHHhccccCcccccccHHHHHHHHHHHhC
Confidence 7999999977654333344578999999999999999999988 5 32110 0000000 0 012367899999999
Q ss_pred CCCCCCCCHHHHhhhhccCCC
Q 010673 188 IDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 188 ~d~dG~l~~~e~~~l~~~~p~ 208 (504)
.|+||.|+++||..++...|.
T Consensus 158 ~d~dG~I~~~Ef~~~~~~~~~ 178 (190)
T 2l2e_A 158 KNKDGQLTLEEFCEGSKRDPT 178 (190)
T ss_dssp CCSSCCBCHHHHHHHHHTCTH
T ss_pred CCCCCcCcHHHHHHHHHhCcH
Confidence 999999999999999987764
No 197
>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like domain, structural GE NPPSFA; 2.05A {Aquifex aeolicus} PDB: 2ywf_A* 2ywg_A* 2ywh_A*
Probab=99.60 E-value=1.1e-14 Score=154.57 Aligned_cols=162 Identities=19% Similarity=0.245 Sum_probs=113.5
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCC--CCC-----CCCC----------CccceEEEEEEEc-CCCcEEEEEEecCCh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERP--FSE-----NYAP----------TTGEQYAVNVVDQ-PGGNKKTLILQEIPE 343 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~--~~~-----~~~~----------T~~~~~~~~~v~~-~~~~~~~li~d~~g~ 343 (504)
.+..+|+|+|+.++|||||+++|+... +.. .... |+........+.. ++....+.+||++|+
T Consensus 4 ~~irnI~IiGh~d~GKTTLi~rLl~~tg~i~~~~~~~~~~D~~~~ErerGITI~~~~~~~~~~~~dg~~~~inliDTPGh 83 (600)
T 2ywe_A 4 KNVRNFCIIAHVDHGKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHLIDTPGH 83 (600)
T ss_dssp GGEEEEEEECC--CCHHHHHHHHHHHHTC-----------------------CCCCSEEEEEECTTSCEEEEEEECCCCS
T ss_pred cCceEEEEECCCCCCHHHHHHHHHhccCCcccccccccccccchhhhcccceeeeeEEEEEEEcCCCCeEEEEEEECCCc
Confidence 456799999999999999999998631 110 0000 1111111111222 322356778999999
Q ss_pred hhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHh
Q 010673 344 EGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQEL 423 (504)
Q Consensus 344 ~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~ 423 (504)
..+.... ...+..+|++|+|+|+++..+++....|..... . ++|+++|+||+|+.... .....+++.+.+
T Consensus 84 ~dF~~ev--~r~l~~aD~aILVVDa~~gv~~qt~~~~~~a~~-~------~ipiIvviNKiDl~~a~-~~~v~~el~~~l 153 (600)
T 2ywe_A 84 VDFSYEV--SRALAACEGALLLIDASQGIEAQTVANFWKAVE-Q------DLVIIPVINKIDLPSAD-VDRVKKQIEEVL 153 (600)
T ss_dssp GGGHHHH--HHHHHTCSEEEEEEETTTBCCHHHHHHHHHHHH-T------TCEEEEEEECTTSTTCC-HHHHHHHHHHTS
T ss_pred HhHHHHH--HHHHHhCCEEEEEEECCCCccHHHHHHHHHHHH-C------CCCEEEEEeccCccccC-HHHHHHHHHHhh
Confidence 8876554 457889999999999999988888777766543 2 79999999999997643 233566777777
Q ss_pred CCC--CeEEEeccc-cCHHHHHHHHHHHHhCCC
Q 010673 424 GIE--PPIPVSMKS-KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 424 ~~~--~~~~vSak~-~gi~el~~~l~~~~~~~~ 453 (504)
++. +++++||++ .|++++++.|.+.+..|.
T Consensus 154 g~~~~~vi~vSAktg~GI~~Lle~I~~~lp~p~ 186 (600)
T 2ywe_A 154 GLDPEEAILASAKEGIGIEEILEAIVNRIPPPK 186 (600)
T ss_dssp CCCGGGCEECBTTTTBSHHHHHHHHHHHSCCCC
T ss_pred CCCcccEEEEEeecCCCchHHHHHHHHhccccc
Confidence 774 489999999 999999999999886554
No 198
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.60 E-value=1.2e-16 Score=145.89 Aligned_cols=141 Identities=20% Similarity=0.159 Sum_probs=117.8
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHH----------cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhH
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKC----------FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGF 121 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~----------~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~F 121 (504)
++++++.++++|..+|.|+||.|+.+|+..++..+ .|..++++++..+++.++.+ ++|.|++++|
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d-----~~g~i~~~ef 109 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD-----RNGYIEYSEF 109 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTT-----CSSSEEHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCC-----CCCcCCHHHH
Confidence 67788999999999999999999999999988765 37778899999999999877 4677999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHh
Q 010673 122 LFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELE 200 (504)
Q Consensus 122 l~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~ 200 (504)
+.++.........+.+..+|+.||.|++|.|+.+++ . .+. . ..++ .+.+.++|+.+|.|+||.|+++||.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~-~l~-~----~~~~---~~~~~~~~~~~D~~~dg~i~~~eF~ 180 (191)
T 3khe_A 110 VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGR-LFG-V----TEVD---DETWHQVLQECDKNNDGEVDFEEFV 180 (191)
T ss_dssp HHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHH-HTT-S----SCCC---HHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred HHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHH-HHc-c----CCCC---HHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 987654444556678999999999999999999999 6 442 1 1122 2668899999999999999999999
Q ss_pred hhhccC
Q 010673 201 DLFLTA 206 (504)
Q Consensus 201 ~l~~~~ 206 (504)
.++...
T Consensus 181 ~~~~~~ 186 (191)
T 3khe_A 181 EMMQKI 186 (191)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 199
>3j2k_7 ERF3, eukaryotic polypeptide chain release factor 3; rabbit 80S ribosome, ribosome-translation complex; 17.00A {Oryctolagus cuniculus}
Probab=99.60 E-value=1e-14 Score=150.73 Aligned_cols=153 Identities=13% Similarity=0.152 Sum_probs=102.6
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCC-------------------------------CCCCccceEEEEEEEcC
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSEN-------------------------------YAPTTGEQYAVNVVDQP 329 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~-------------------------------~~~T~~~~~~~~~v~~~ 329 (504)
.+..++|+++|.+|+|||||+++|++...... ..+.++.......+..+
T Consensus 14 ~k~~~~i~iiG~~d~GKSTL~~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~a~~~d~~~~er~~GiTid~~~~~~~~~ 93 (439)
T 3j2k_7 14 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE 93 (439)
T ss_pred CCceeEEEEEeCCCCCHHHHHHHHHHHcCCCchHHHHHHHHHHHhccccchhhhhhhccchhHhhcCceEEEeEEEEecC
Confidence 45678999999999999999999965421110 01112222333335544
Q ss_pred CCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCccc---HH---HHHHHHHHHHHhccCCCCCCc-EEEEEE
Q 010673 330 GGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYS---WK---RTKELLVEVARLGEDSGYGVP-CLLIAS 402 (504)
Q Consensus 330 ~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s---~~---~~~~~~~~l~~~~~~~~~~~p-iilV~N 402 (504)
...+.+||++|++.+.... ...+..+|++|+|+|+++... |+ ...+.+..+... ++| +++|+|
T Consensus 94 --~~~~~iiDTPGh~~f~~~~--~~~~~~aD~~ilVVDa~~g~~e~~~~~~~qt~e~l~~~~~~------~v~~iIvviN 163 (439)
T 3j2k_7 94 --KKHFTILDAPGHKSFVPNM--IGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA------GVKHLIVLIN 163 (439)
T ss_pred --CeEEEEEECCChHHHHHHH--HhhHhhCCEEEEEEECCCCccccccCCCchHHHHHHHHHHc------CCCeEEEEee
Confidence 3578899999998875544 457889999999999998642 11 223333333332 566 999999
Q ss_pred CCCCCCCcc-------chHHHHHHHHHhCCC-----CeEEEeccc-cCHHHHHH
Q 010673 403 KDDLKPYTM-------AVQDSARVTQELGIE-----PPIPVSMKS-KDLNNVFS 443 (504)
Q Consensus 403 K~Dl~~~~~-------~~~~~~~~~~~~~~~-----~~~~vSak~-~gi~el~~ 443 (504)
|+|+..... ..++...+.+.+++. +++++||++ .|+.++.+
T Consensus 164 K~Dl~~~~~~~~~~~~i~~~~~~~l~~~g~~~~~~~~~i~iSA~~G~ni~~l~~ 217 (439)
T 3j2k_7 164 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSD 217 (439)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHHHhcccccCCeeEEEeeccCCcccccccc
Confidence 999964211 122556677777752 489999999 99999665
No 200
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.59 E-value=9.5e-16 Score=138.97 Aligned_cols=139 Identities=12% Similarity=0.126 Sum_probs=110.2
Q ss_pred Ccch--HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 49 QTLK--PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 49 ~~l~--~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++ +++++.++++|..+|.|+||.|+.+||..+++. +|.+ ++++..++..++.+ ++|.|++++|+.++.
T Consensus 29 ~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~g~~--~~~~~~~~~~~D~d-----~~g~i~~~Ef~~~~~ 100 (180)
T 3mse_B 29 HELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLAS-VGIK--KWDINRILQALDIN-----DRGNITYTEFMAGCY 100 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TTCC--HHHHHHHHHHHCTT-----CCSEECHHHHHHHHS
T ss_pred HHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-cCCC--HHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 3454 889999999999999999999999999999874 5754 78999999999877 466799999997765
Q ss_pred HHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCC--------CCCCHH
Q 010673 127 LFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDND--------GAVRPA 197 (504)
Q Consensus 127 ~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~d--------G~l~~~ 197 (504)
.... ...+.++.+|+.||.|++|.|+.++| . .+. . ..++ .+++.++|+.+|.|+| |.|+++
T Consensus 101 ~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~-~l~-~----~~~~---~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~ 170 (180)
T 3mse_B 101 RWKN-IESTFLKAAFNKIDKDEDGYISKSDIVS-LVH-D----KVLD---NNDIDNFFLSVHSIKKGIPREHIINKISFQ 170 (180)
T ss_dssp CCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHH-HTT-T----SSCC---HHHHHHHHHHHHTC---------CCCBCHH
T ss_pred hccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHH-HHc-C----CCCC---HHHHHHHHHHhhhccCcccccccCCeeeHH
Confidence 3222 22368999999999999999999999 6 442 1 1222 2668899999999999 999999
Q ss_pred HHhhhhcc
Q 010673 198 ELEDLFLT 205 (504)
Q Consensus 198 e~~~l~~~ 205 (504)
||..++..
T Consensus 171 eF~~~l~~ 178 (180)
T 3mse_B 171 EFKDYMLS 178 (180)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988753
No 201
>1kk1_A EIF2gamma; initiation of translation; HET: GNP; 1.80A {Pyrococcus abyssi} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1kjz_A* 1kk2_A* 1kk3_A* 1kk0_A* 2d74_A 2dcu_A*
Probab=99.59 E-value=3.8e-14 Score=145.54 Aligned_cols=164 Identities=16% Similarity=0.184 Sum_probs=107.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCC---CCCCCC--CccceEEEEEEEc-------------C--CC----cEEEE
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPF---SENYAP--TTGEQYAVNVVDQ-------------P--GG----NKKTL 336 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~---~~~~~~--T~~~~~~~~~v~~-------------~--~~----~~~~l 336 (504)
....++|+++|.+++|||||+++|++... .....+ |+...+....+.. + +. ...+.
T Consensus 7 ~~~~~~I~iiG~~~~GKSTLi~~L~g~~~~~~~~e~~~giTi~~~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~~~i~ 86 (410)
T 1kk1_A 7 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVS 86 (410)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHTCCCC--CGGGGSCSSSCCEEEEEEEEECTTTCCEESSSBCTTTCCBCEEEEEEE
T ss_pred CCCccEEEEECCCCCCHHHHHHHHhCCccccChhhhcCCcEEEEeeeeeecccccccccccccccccccCcccccccEEE
Confidence 45678999999999999999999996533 222222 4444443332211 1 11 15677
Q ss_pred EEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch---
Q 010673 337 ILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV--- 413 (504)
Q Consensus 337 i~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~--- 413 (504)
+||++|++.+.... ...+..+|++|+|+|+++..+.....+.+..+... ...|+++|+||+|+.......
T Consensus 87 iiDtPGh~~f~~~~--~~~~~~~D~~ilVvda~~g~~~~qt~e~l~~~~~~-----~~~~iivviNK~Dl~~~~~~~~~~ 159 (410)
T 1kk1_A 87 FIDAPGHEALMTTM--LAGASLMDGAILVIAANEPCPRPQTREHLMALQII-----GQKNIIIAQNKIELVDKEKALENY 159 (410)
T ss_dssp EEECSSHHHHHHHH--HHCGGGCSEEEEEEETTSCSSCHHHHHHHHHHHHH-----TCCCEEEEEECGGGSCHHHHHHHH
T ss_pred EEECCChHHHHHHH--HhhhhhCCEEEEEEECCCCCCChhHHHHHHHHHHc-----CCCcEEEEEECccCCCHHHHHHHH
Confidence 89999998775443 45677899999999999653111222222233322 135899999999998754322
Q ss_pred HHHHHHHHHh---CCCCeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 414 QDSARVTQEL---GIEPPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 414 ~~~~~~~~~~---~~~~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
+++.++.+.. +. +++++||++ .|+++|++.|.+.+..|
T Consensus 160 ~~i~~~l~~~~~~~~-~~i~vSA~~g~gi~~L~~~l~~~~~~p 201 (410)
T 1kk1_A 160 RQIKEFIEGTVAENA-PIIPISALHGANIDVLVKAIEDFIPTP 201 (410)
T ss_dssp HHHHHHHTTSTTTTC-CEEECBTTTTBSHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhcCcCCC-eEEEeeCCCCCCHHHHHHHHHHhCCCC
Confidence 2344444432 33 489999999 99999999999877544
No 202
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.59 E-value=5e-16 Score=139.31 Aligned_cols=142 Identities=15% Similarity=0.124 Sum_probs=107.5
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcC----CCCCHHH-HHHHHHHhhhhcc--CCcCCCCCCHHhHHHH
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFN----APLQPAE-IVGVKRVVQEKQH--DGVNDLGLTLSGFLFL 124 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g----~~~~~~e-~~~~~~~~~~~~~--~~~~~~~i~~~~Fl~l 124 (504)
|+++++.++++|..+|.|+||.|+.+||..++... | .+++.++ +..++...-...- -+ ++|.|++++|+.+
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D-~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERF-AKESEMKAEHAKVLMDSLTGVWDNFLTAVA-GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHH-HHHSSCCTTHHHHHHHHHHHHHHHTGGGTT-TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHH-HHHhCCCCCcHHHHHHHHHHHHHHHHHhcC-CCCeEcHHHHHHH
Confidence 57889999999999999999999999999997754 5 8999988 7554311111100 02 4677999999988
Q ss_pred HHHHHhcC-----CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHH
Q 010673 125 HALFIEKG-----RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAE 198 (504)
Q Consensus 125 ~~~~~~~~-----~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e 198 (504)
+....... ..+.++.+|+.||.|++|.|+.++| . .+... .++ .+++..+|+.+|.|+||.|+++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~-~l~~~-----g~~---~~~~~~~~~~~D~d~dg~i~~~e 149 (174)
T 1q80_A 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGI-FFGML-----GLD---KTMAPASFDAIDTNNDGLLSLEE 149 (174)
T ss_dssp HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHH-HHHHH-----TCC---GGGHHHHHHHHCTTCSSSBCHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHH-HHHHc-----CCC---HHHHHHHHHHhCCCCCceEeHHH
Confidence 77654421 1257999999999999999999988 5 22100 112 15688999999999999999999
Q ss_pred Hhhhhc
Q 010673 199 LEDLFL 204 (504)
Q Consensus 199 ~~~l~~ 204 (504)
|..++.
T Consensus 150 f~~~~~ 155 (174)
T 1q80_A 150 FVIAGS 155 (174)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988875
No 203
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=99.59 E-value=1.5e-15 Score=158.20 Aligned_cols=151 Identities=17% Similarity=0.155 Sum_probs=96.9
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCCCCC--CCCccceEEEEEEEcCCCcEEEEEEecCC--------hhhHhhhhhhh
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFSENY--APTTGEQYAVNVVDQPGGNKKTLILQEIP--------EEGVKKILSNK 353 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--~~T~~~~~~~~~v~~~~~~~~~li~d~~g--------~~~~~~~~~~~ 353 (504)
.++|+|+|.+|||||||+|+|++..+.... ++++.+.. ...+..+...+.+||++| .+.+.... .
T Consensus 23 ~~~V~lvG~~nvGKSTL~n~l~~~~~~~v~~~~g~t~~~~---~~~~~~~~~~~~liDT~G~~~~~~~~~~~~~~~~--~ 97 (456)
T 4dcu_A 23 KPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRI---YSSAEWLNYDFNLIDTGGIDIGDEPFLAQIRQQA--E 97 (456)
T ss_dssp CCEEEEECSSSSSHHHHHHHHEEEEEC-----------CE---EEECTTCSSCCEEECCCC------CCHHHHHHHH--H
T ss_pred CCEEEEECCCCCcHHHHHHHHhCCCCcccCCCCCcceeEE---EEEEEECCceEEEEECCCCCCcchHHHHHHHHHH--H
Confidence 568999999999999999999998765332 33443322 223332335677899999 44444433 5
Q ss_pred hhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEec
Q 010673 354 EALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSM 433 (504)
Q Consensus 354 ~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSa 433 (504)
.++..+|++|+|+|+.+..+... .++..+.. ..++|+++|+||+|+...... ..++ ..+++..++++||
T Consensus 98 ~~~~~ad~il~VvD~~~~~~~~d--~~l~~~l~-----~~~~pvilV~NK~D~~~~~~~---~~e~-~~lg~~~~~~iSA 166 (456)
T 4dcu_A 98 IAMDEADVIIFMVNGREGVTAAD--EEVAKILY-----RTKKPVVLAVNKLDNTEMRAN---IYDF-YSLGFGEPYPISG 166 (456)
T ss_dssp HHHHHCSEEEEEEESSSCSCHHH--HHHHHHHT-----TCCSCEEEEEECC------------CCS-GGGSSSSEEECCT
T ss_pred hhHhhCCEEEEEEeCCCCCChHH--HHHHHHHH-----HcCCCEEEEEECccchhhhhh---HHHH-HHcCCCceEEeec
Confidence 57889999999999887655443 33333332 248999999999998753211 1111 1345556799999
Q ss_pred cc-cCHHHHHHHHHHHHh
Q 010673 434 KS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 434 k~-~gi~el~~~l~~~~~ 450 (504)
++ .|+.++++.+.+.+.
T Consensus 167 ~~g~gv~~L~~~i~~~l~ 184 (456)
T 4dcu_A 167 THGLGLGDLLDAVAEHFK 184 (456)
T ss_dssp TTCTTHHHHHHHHHTTGG
T ss_pred ccccchHHHHHHHHhhcc
Confidence 99 999999999988764
No 204
>1d2e_A Elongation factor TU (EF-TU); G-protein, beta-barrel, RNA binding protein; HET: GDP; 1.94A {Bos taurus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1xb2_A* 2hcj_A* 2hdn_A*
Probab=99.58 E-value=1.3e-14 Score=148.16 Aligned_cols=161 Identities=15% Similarity=0.121 Sum_probs=110.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCC-------CCCC--CC-----CCccceEEEEEEEcCCCcEEEEEEecCChhhHhh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERP-------FSEN--YA-----PTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKK 348 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~-------~~~~--~~-----~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~ 348 (504)
..++|+++|.+++|||||+++|++.. +... .. ...+.++....+.+..+...+.+||++|++.+..
T Consensus 2 ~~~~I~iiG~~~~GKSTLi~~L~~~~~~~g~~~~~~~~~~d~~~~e~~~giTi~~~~~~~~~~~~~~~iiDtpG~~~f~~ 81 (397)
T 1d2e_A 2 PHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVK 81 (397)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCEEEEEECSSHHHHHH
T ss_pred CeEEEEEEeCCCCCHHHHHHHHhChhhhcCccccchhhhhhcCHHHHhcCcEEEeeeEEeccCCeEEEEEECCChHHHHH
Confidence 45899999999999999999999741 1100 00 0111122222233332346778999999987754
Q ss_pred hhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCc-EEEEEECCCCCCCccc----hHHHHHHHHHh
Q 010673 349 ILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVP-CLLIASKDDLKPYTMA----VQDSARVTQEL 423 (504)
Q Consensus 349 ~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~p-iilV~NK~Dl~~~~~~----~~~~~~~~~~~ 423 (504)
.. ...+..+|++|+|+|+++....+.... +..+... ++| +++|+||+|+...... ..+..++++.+
T Consensus 82 ~~--~~~~~~aD~~ilVvda~~g~~~qt~e~-l~~~~~~------~vp~iivviNK~Dl~~~~~~~~~~~~~~~~~l~~~ 152 (397)
T 1d2e_A 82 NM--ITGTAPLDGCILVVAANDGPMPQTREH-LLLARQI------GVEHVVVYVNKADAVQDSEMVELVELEIRELLTEF 152 (397)
T ss_dssp HH--HHTSSCCSEEEEEEETTTCSCHHHHHH-HHHHHHT------TCCCEEEEEECGGGCSCHHHHHHHHHHHHHHHHHT
T ss_pred HH--HhhHhhCCEEEEEEECCCCCCHHHHHH-HHHHHHc------CCCeEEEEEECcccCCCHHHHHHHHHHHHHHHHHc
Confidence 43 457889999999999999765554333 3444433 688 7899999999853221 23667788888
Q ss_pred CCC----CeEEEeccc-cC----------HHHHHHHHHHHHhCC
Q 010673 424 GIE----PPIPVSMKS-KD----------LNNVFSRIIWAAEHP 452 (504)
Q Consensus 424 ~~~----~~~~vSak~-~g----------i~el~~~l~~~~~~~ 452 (504)
++. +++++||++ .| +.+|++.|.+.+..|
T Consensus 153 ~~~~~~~~~i~~SA~~g~n~~~~~~~~g~i~~Ll~~l~~~~p~p 196 (397)
T 1d2e_A 153 GYKGEETPIIVGSALCALEQRDPELGLKSVQKLLDAVDTYIPVP 196 (397)
T ss_dssp TSCTTTSCEEECCHHHHHTTCCTTTTHHHHHHHHHHHHHHSCCC
T ss_pred CCCcccCcEEEeehhhcccccCCCccCCcHHHHHHHHHHhCCCC
Confidence 752 589999999 65 899999998876544
No 205
>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 2y0u_Z* 2y0w_Z* 2y0y_Z* 2y10_Z* 2y12_Z* 2y14_Z* 2y16_Z* 2y18_Z* 2wrn_Z* 2wrq_Z* 2c77_A* 1aip_A 1exm_A* 1ha3_A* 2xqd_Z* 3fic_Z* 4abr_Z* 1b23_P* 1ob5_A* 1ttt_A* ...
Probab=99.58 E-value=6.5e-15 Score=151.00 Aligned_cols=163 Identities=14% Similarity=0.110 Sum_probs=111.5
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcC--------CCCCC--CC-----CCccceEEEEEEEcCCCcEEEEEEecCChhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLER--------PFSEN--YA-----PTTGEQYAVNVVDQPGGNKKTLILQEIPEEG 345 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~--------~~~~~--~~-----~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~ 345 (504)
.+..++|+++|.+|+|||||+++|++. .+... .. .+.+.++....+.+..+...+.+||++|++.
T Consensus 8 ~~~~~~I~iiG~~~~GKSTLi~~L~~~~~~~g~~~~~~~~~~~d~~~~e~~~GiTi~~~~~~~~~~~~~~~iiDtpG~~~ 87 (405)
T 2c78_A 8 TKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHAD 87 (405)
T ss_dssp -CCEEEEEEECSTTSSHHHHHHHHHHHHHHSCTTSCCCCHHHHSCSHHHHHHTCCCSCEEEEEECSSCEEEEEECCCSGG
T ss_pred CCCeEEEEEEcCCCCCHHHHHHHHHhhhhhcCccccccchhhccCCHHHHHcCCCEEeeeeEeccCCeEEEEEECCChHH
Confidence 356789999999999999999999973 22110 00 0111111111222332346778999999987
Q ss_pred HhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCc-EEEEEECCCCCCCccc----hHHHHHHH
Q 010673 346 VKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVP-CLLIASKDDLKPYTMA----VQDSARVT 420 (504)
Q Consensus 346 ~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~p-iilV~NK~Dl~~~~~~----~~~~~~~~ 420 (504)
+.... ...+..+|++|+|+|+++....+. .+++..+... ++| +++|+||+|+...... ..+..+++
T Consensus 88 f~~~~--~~~~~~aD~~ilVvda~~g~~~qt-~~~l~~~~~~------~ip~iivviNK~Dl~~~~~~~~~~~~~~~~~l 158 (405)
T 2c78_A 88 YIKNM--ITGAAQMDGAILVVSAADGPMPQT-REHILLARQV------GVPYIVVFMNKVDMVDDPELLDLVEMEVRDLL 158 (405)
T ss_dssp GHHHH--HHHHTTCSSEEEEEETTTCCCHHH-HHHHHHHHHT------TCCCEEEEEECGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHCCEEEEEEECCCCCcHHH-HHHHHHHHHc------CCCEEEEEEECccccCcHHHHHHHHHHHHHHH
Confidence 75443 457889999999999998765443 5566666543 678 8999999999853321 22566777
Q ss_pred HHhCC----CCeEEEeccc-cC------------------HHHHHHHHHHHHhCC
Q 010673 421 QELGI----EPPIPVSMKS-KD------------------LNNVFSRIIWAAEHP 452 (504)
Q Consensus 421 ~~~~~----~~~~~vSak~-~g------------------i~el~~~l~~~~~~~ 452 (504)
+.+++ .+++++||++ .| +.+|++.|.+.+..|
T Consensus 159 ~~~~~~~~~~~~i~~SA~~g~~v~~~~~~~~~~~~~~~~~i~~Ll~~l~~~lp~p 213 (405)
T 2c78_A 159 NQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTP 213 (405)
T ss_dssp HHTTSCTTTSCEEECCHHHHHHHHHHCTTCCTTSCHHHHHHHHHHHHHHHHSCCC
T ss_pred HHhcccccCCCEEEccHHHhhhhhccccccccCCCcccccHHHHHHHHHhhcCCC
Confidence 88775 3589999999 77 788888888776544
No 206
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.58 E-value=6.9e-16 Score=162.54 Aligned_cols=141 Identities=18% Similarity=0.143 Sum_probs=117.1
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc-------CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHH
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCF-------NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF 123 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~-------g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~ 123 (504)
++++++++++++|..||.|+||.|+.+||..+++... +.++++++++.+++.+|.+ ++|.|+++||+.
T Consensus 340 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d-----~~G~I~~~EF~~ 414 (494)
T 3lij_A 340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD-----RNGYIDYSEFVT 414 (494)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTT-----CSSSEEHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCC-----CCCcCcHHHHHH
Confidence 4789999999999999999999999999999887652 3467799999999999887 577799999998
Q ss_pred HHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhh
Q 010673 124 LHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDL 202 (504)
Q Consensus 124 l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l 202 (504)
++.........+++..+|+.||.|++|.|+.++| . .+.. ..++ .+++.++|+.+|.|+||.|+++||.++
T Consensus 415 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~-~l~~-----~~~~---~~~~~~~~~~~D~d~dG~I~~~EF~~~ 485 (494)
T 3lij_A 415 VAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELAS-VFGL-----DHLE---SKTWKEMISGIDSNNDGDVDFEEFCKM 485 (494)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHH-HC-C-----CSCC---CHHHHHHHHTTCSSSSSSEEHHHHHHH
T ss_pred HHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHH-HHHh-----cCCC---HHHHHHHHHHhCCCCCCcCCHHHHHHH
Confidence 7755544556678999999999999999999999 6 3321 0111 267889999999999999999999998
Q ss_pred hcc
Q 010673 203 FLT 205 (504)
Q Consensus 203 ~~~ 205 (504)
+..
T Consensus 486 ~~~ 488 (494)
T 3lij_A 486 IQK 488 (494)
T ss_dssp HHH
T ss_pred HHh
Confidence 874
No 207
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=99.58 E-value=5.5e-15 Score=143.41 Aligned_cols=159 Identities=15% Similarity=0.106 Sum_probs=92.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCC--------CCCccceEEEEEEEcCCCcEEEEEEecCChh-------hHh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENY--------APTTGEQYAVNVVDQPGGNKKTLILQEIPEE-------GVK 347 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--------~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~-------~~~ 347 (504)
..++|+|+|.+|||||||+|+|++....... .+|++.......+..++....+.+||++|.. .+.
T Consensus 7 ~~~~I~vvG~~g~GKSTLin~L~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~liDTpG~~d~~~~~~~~~ 86 (274)
T 3t5d_A 7 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQ 86 (274)
T ss_dssp CEEEEEEEECTTSSHHHHHHHHSSSCC---------------CCCEEEEEEECC--CCEEEEEEECCCCSCCSCCTTTTH
T ss_pred cEEEEEEECCCCCCHHHHHHHHhCCCccccCCCCcccccCCceEEEEEEEEEecCCeEEEEEEEECCCccccccchhhHH
Confidence 4689999999999999999998877654432 4566655555555555333477889999862 111
Q ss_pred hhh----h-hhhhc-------------ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 348 KIL----S-NKEAL-------------ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 348 ~~~----~-~~~~~-------------~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
.+. . ...++ ..+|+++++++.+.......-..++..+. .++|+++|+||+|+...
T Consensus 87 ~i~~~i~~~~~~~l~~~~~~~r~~~~d~r~~~~l~~i~~~~~~~~~~d~~~l~~l~-------~~~pvi~V~nK~D~~~~ 159 (274)
T 3t5d_A 87 PVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLH-------EKVNIIPLIAKADTLTP 159 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCSCCCCCCCEEEEEECSCCSSCCHHHHHHHHHHT-------TTSCEEEEESSGGGSCH
T ss_pred HHHHHHHHHHHHHHHhhcccccccccCCceeEEEEEecCCCCCCCHHHHHHHHHHh-------ccCCEEEEEeccCCCCH
Confidence 111 0 01111 23789999998765322222234444443 27999999999998765
Q ss_pred ccchH---HHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHHHHH
Q 010673 410 TMAVQ---DSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAA 449 (504)
Q Consensus 410 ~~~~~---~~~~~~~~~~~~~~~~vSak~-~gi~el~~~l~~~~ 449 (504)
.+... .+.+.....+++ ++++||++ .|++++++.|.+.+
T Consensus 160 ~e~~~~~~~i~~~l~~~~i~-v~~~sa~~~~~~~~l~~~l~~~~ 202 (274)
T 3t5d_A 160 EECQQFKKQIMKEIQEHKIK-IYEFPETDDEEENKLVKKIKDRL 202 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CCCC-----------CHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCe-EEcCCCCCChhHHHHHHHHhcCC
Confidence 44332 344555567776 89999999 99999999998865
No 208
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.57 E-value=1.5e-15 Score=137.70 Aligned_cols=140 Identities=18% Similarity=0.153 Sum_probs=109.0
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCC
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGR 133 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~ 133 (504)
+++..++++|..|| +||.|+.+||.. ++|.+++++++..+++.++....+ +++.|++++|+.++........
T Consensus 25 ~~~~~~~~~F~~~D--~dG~I~~~el~~----~lg~~~~~~~~~~i~~~~d~~~~~--~~~~i~~~ef~~~~~~~~~~~~ 96 (179)
T 3a8r_A 25 DGWAAVEKRFNQLQ--VDGVLLRSRFGK----CIGMDGSDEFAVQMFDSLARKRGI--VKQVLTKDELKDFYEQLTDQGF 96 (179)
T ss_dssp CCHHHHHHHHHHHC--BTTBEEGGGHHH----HHTCCSCHHHHHHHHHHHHHHHTC--CSSEECHHHHHHHHHHHHCCCH
T ss_pred hhHHHHHHHHhccC--CCCCCcHHHHHH----HHCCCCcHHHHHHHHHHHHHhccC--CCCCcCHHHHHHHHHHHcCCCH
Confidence 44678999999999 899999999976 569999999999999998764221 2456999999987765433334
Q ss_pred chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChh--------HHHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 134 LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASE--------AVEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 134 ~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~--------~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.++++.+|+.||.|++|.|+.++| . .+.. .++.. ..+++.++|+.+|.|+||.|+++||..++.
T Consensus 97 ~~~l~~~F~~~D~d~dG~Is~~El~~-~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 169 (179)
T 3a8r_A 97 DNRLRTFFDMVDKNADGRLTAEEVKE-IIAL------SASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLL 169 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHH-HHHH------HHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHH-HHHH------HhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 467999999999999999999999 6 3310 22221 237899999999999999999999999998
Q ss_pred cCCC
Q 010673 205 TAPE 208 (504)
Q Consensus 205 ~~p~ 208 (504)
..|.
T Consensus 170 ~~p~ 173 (179)
T 3a8r_A 170 QSPS 173 (179)
T ss_dssp ----
T ss_pred hCcc
Confidence 7664
No 209
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.57 E-value=8.7e-16 Score=132.75 Aligned_cols=130 Identities=14% Similarity=0.097 Sum_probs=105.1
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcC---
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKG--- 132 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~--- 132 (504)
+++++++|..||.|+||.|+.+||..+++. +|.+++.+++..++. + ++|.|++++|+.++.......
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----~-----~~g~i~~~eF~~~~~~~~~~~~~~ 73 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRA-CGQNPTLAEITEIES----T-----LPAEVDMEQFLQVLNRPNGFDMPG 73 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHH-TSCCCCHHHHHHHHT----T-----SCSSEEHHHHHHHHCTTSSSSSSC
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHh----C-----CCCcCcHHHHHHHHHHHhcccCcc
Confidence 456899999999999999999999999775 699999999998886 2 467799999998775443221
Q ss_pred CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 133 RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
..+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|. +||.|+++||..++.
T Consensus 74 ~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 74 DPEEFVKGFQVFDKDATGMIGVGELRY-VL-------TSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHH-HH-------HHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcEeHHHHHH-HH-------HHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 2268999999999999999999988 5 22 1222111 2678999999999 999999999998774
No 210
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.56 E-value=9.4e-16 Score=137.69 Aligned_cols=157 Identities=14% Similarity=0.198 Sum_probs=119.8
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcC-CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcC
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFN-APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKG 132 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g-~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~ 132 (504)
...++++++|..+|+|+||.|+.+||..+++. +| .+++++++..++..++.+ ++|.|++++|+.++..
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~ef~~~~~~----- 72 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRE-----NKAGVNFSEFTGVWKY----- 72 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCC-SSSSCCCHHHHHHHHHHHCSS-----SSSEECHHHHHHHHHH-----
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHh-cCCCCCCHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHH-----
Confidence 35678999999999999999999999998774 46 789999999999999776 4667999999987654
Q ss_pred CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCC
Q 010673 133 RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP 210 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p 210 (504)
.+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|+||.|+++||..++.....+.
T Consensus 73 -~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~ 143 (172)
T 2znd_A 73 -ITDWQNVFRTYDRDNSGMIDKNELKQ-AL-------SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLT 143 (172)
T ss_dssp -HHHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCCCCCccCHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 257999999999999999999988 5 33 1122111 26788999999999999999999998887542111
Q ss_pred CCCCccccccccccCCcccH--HHHH
Q 010673 211 WDEAPYKDAAETTALGNLTL--KGFV 234 (504)
Q Consensus 211 ~~~~~~~~~~~~~~~g~i~~--~~~l 234 (504)
........+..|.|+. +.|+
T Consensus 144 ----~~F~~~D~d~dG~i~~~~~ef~ 165 (172)
T 2znd_A 144 ----DIFRRYDTDQDGWIQVSYEQYL 165 (172)
T ss_dssp ----HHHHHHCTTSSSCCCCCHHHHH
T ss_pred ----HHHHHhCCCCCCeEeeeHHHHH
Confidence 0112234566788874 5553
No 211
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=99.56 E-value=1.7e-14 Score=137.72 Aligned_cols=165 Identities=12% Similarity=0.009 Sum_probs=103.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCC---CccceEEEEEEEcCCCcEEEEEEecCChh--------hH-hh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAP---TTGEQYAVNVVDQPGGNKKTLILQEIPEE--------GV-KK 348 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~---T~~~~~~~~~v~~~~~~~~~li~d~~g~~--------~~-~~ 348 (504)
....++|+++|.+|||||||+|+|++..+.....+ ++.. .....+... + ..+.+||++|.. .+ ..
T Consensus 18 ~~~~l~I~lvG~~g~GKSSlin~l~~~~~~~~~~~~~~~T~~-~~~~~~~~~-~-~~i~liDTPG~~~~~~~~~~~~~~~ 94 (247)
T 3lxw_A 18 GESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRA-CTTGSRRWD-K-CHVEVVDTPDIFSSQVSKTDPGCEE 94 (247)
T ss_dssp --CEEEEEEESSTTSSHHHHHHHHHTSCCC---------CCS-CEEEEEEET-T-EEEEEEECCSCSSTTHHHHSTTSHH
T ss_pred CCCceEEEEECCCCCcHHHHHHHHhCCCCccccCCCCCcccc-EEEEEEEEC-C-cEEEEEECCCCCCCCCCcHHHHHHH
Confidence 35679999999999999999999999887654422 3322 222334444 3 667889999952 11 22
Q ss_pred hhhh-hhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-------hHHHHHHH
Q 010673 349 ILSN-KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-------VQDSARVT 420 (504)
Q Consensus 349 ~~~~-~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-------~~~~~~~~ 420 (504)
+.+. ......+|++|+|+|+++. +... ..++..+.+.......+.|+++|+||+|+...... ...++.+.
T Consensus 95 i~~~~~~~~~~~d~il~V~d~~~~-~~~~-~~~~~~l~~~~~~~~~~~~iilv~nK~Dl~~~~~~~~l~~~~~~~l~~l~ 172 (247)
T 3lxw_A 95 RGHCYLLSAPGPHALLLVTQLGRF-TAQD-QQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGGSLHDYVSNTENRALRELV 172 (247)
T ss_dssp HHHHHHHHTTCCSEEEEEEETTBC-CHHH-HHHHHHHHHHHCGGGGGGEEEEEECGGGGTTCCHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEEEeCCCC-CHHH-HHHHHHHHHHhChhhhccEEEEEEchHhcCCCCHHHHHhhcccHHHHHHH
Confidence 2111 1223899999999999853 2221 22333333321111236899999999999764321 12467788
Q ss_pred HHhCCCCeEEEecc-----c-cCHHHHHHHHHHHHhC
Q 010673 421 QELGIEPPIPVSMK-----S-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 421 ~~~~~~~~~~vSak-----~-~gi~el~~~l~~~~~~ 451 (504)
+.++.. ++.++++ . .|+++|++.|.+.+..
T Consensus 173 ~~~g~~-~~~~~~~~~~~~~~~~v~~Ll~~i~~~~~~ 208 (247)
T 3lxw_A 173 AECGGR-VCAFDNRATGREQEAQVEQLLGMVEGLVLE 208 (247)
T ss_dssp HHTTTC-EEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCe-EEEEeCCCCccccHHHHHHHHHHHHHHHHH
Confidence 888876 6656543 3 6899999999998853
No 212
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.56 E-value=9.7e-16 Score=160.94 Aligned_cols=142 Identities=20% Similarity=0.148 Sum_probs=113.2
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHH---HcCCCCC-------HHHHHHHHHHhhhhccCCcCCCCCCHHh
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVK---CFNAPLQ-------PAEIVGVKRVVQEKQHDGVNDLGLTLSG 120 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~---~~g~~~~-------~~e~~~~~~~~~~~~~~~~~~~~i~~~~ 120 (504)
+++++++.++++|..||+|+||.|+.+||..++.. .+|.+++ +++++.+++.+|.+ ++|.|+++|
T Consensus 329 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d-----~~g~i~~~E 403 (484)
T 3nyv_A 329 TSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD-----KNGYIEYSE 403 (484)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCC-----TTSEEEHHH
T ss_pred CcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCC-----CCCeEeHHH
Confidence 47888999999999999999999999999554433 3577888 89999999999877 466799999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHH
Q 010673 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAEL 199 (504)
Q Consensus 121 Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~ 199 (504)
|+.++.........+++..+|+.||.|++|.|+.++| . .+.. .....+++.++|+.+|.|+||.|+++||
T Consensus 404 f~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~-~l~~--------~~~~~~~~~~~~~~~D~d~dG~i~~~Ef 474 (484)
T 3nyv_A 404 FVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT-IFGV--------SDVDSETWKSVLSEVDKNNDGEVDFDEF 474 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHH-HHHH--------TTCCHHHHHHHHHHHCTTCCSEEEHHHH
T ss_pred HHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHH-HHHh--------cCCCHHHHHHHHHHhcCCCCCcCCHHHH
Confidence 9987765544445578999999999999999999998 5 3311 1111367899999999999999999999
Q ss_pred hhhhccC
Q 010673 200 EDLFLTA 206 (504)
Q Consensus 200 ~~l~~~~ 206 (504)
.+++...
T Consensus 475 ~~~~~~~ 481 (484)
T 3nyv_A 475 QQMLLKL 481 (484)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9988643
No 213
>3tr5_A RF-3, peptide chain release factor 3; protein synthesis, translation; HET: GDP; 2.11A {Coxiella burnetii}
Probab=99.56 E-value=8.6e-15 Score=154.13 Aligned_cols=128 Identities=13% Similarity=0.059 Sum_probs=86.0
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCC-----------------C------CCC-CccceEEEEEEEcCCCcEEEEEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSE-----------------N------YAP-TTGEQYAVNVVDQPGGNKKTLIL 338 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~-----------------~------~~~-T~~~~~~~~~v~~~~~~~~~li~ 338 (504)
+..+|+|+|.+|||||||+++|+...... . ..+ |... ....+... ...+.+|
T Consensus 12 ~~r~IaIiG~~~aGKTTL~~~Ll~~~g~i~~~g~v~~~~~~~~~~~d~~~~e~~~GiTi~~--~~~~~~~~--~~~i~li 87 (528)
T 3tr5_A 12 MRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQRGISVTT--SVMQFPYK--DYLINLL 87 (528)
T ss_dssp TEEEEEEEECTTSSHHHHHHHHHHHTTCHHHHHHHHTC----CCHHHHHHHHHHHCCSSSS--SEEEEEET--TEEEEEE
T ss_pred cCCEEEEECCCCCcHHHHHHHHHhhcCCcccceeeeccccccceecccchhhhcCCeeEEE--eEEEEEeC--CEEEEEE
Confidence 45789999999999999999997221110 0 001 1111 12224443 3678899
Q ss_pred ecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHH
Q 010673 339 QEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSAR 418 (504)
Q Consensus 339 d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~ 418 (504)
|++|+..+.... ..+++.+|++|+|+|+++..+.+....| ..+... ++|+++|+||+|+.... ..+..++
T Consensus 88 DTPG~~df~~~~--~~~l~~aD~allVvDa~~g~~~~t~~~~-~~~~~~------~iPiivviNK~Dl~~~~-~~~~l~e 157 (528)
T 3tr5_A 88 DTPGHADFTEDT--YRTLTAVDSALMVIDAAKGVEPRTIKLM-EVCRLR------HTPIMTFINKMDRDTRP-SIELLDE 157 (528)
T ss_dssp CCCCSTTCCHHH--HHGGGGCSEEEEEEETTTCSCHHHHHHH-HHHHTT------TCCEEEEEECTTSCCSC-HHHHHHH
T ss_pred ECCCchhHHHHH--HHHHHhCCEEEEEEeCCCCCCHHHHHHH-HHHHHc------CCCEEEEEeCCCCcccc-HHHHHHH
Confidence 999997775544 5688999999999999998887775544 444433 79999999999997533 2223444
Q ss_pred HHHHhC
Q 010673 419 VTQELG 424 (504)
Q Consensus 419 ~~~~~~ 424 (504)
+.+.++
T Consensus 158 i~~~l~ 163 (528)
T 3tr5_A 158 IESILR 163 (528)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 544443
No 214
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.56 E-value=6.3e-15 Score=133.50 Aligned_cols=152 Identities=12% Similarity=0.109 Sum_probs=115.5
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..+++++++++.++|..+ |+||.|+.+|+..+++.+....++++++..+++.++.+ ++|.|++++|+.++...
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d-----~~g~i~~~Ef~~~~~~~ 85 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTT-----QTGSVKFEDFVTALSIL 85 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTT-----CSSCEEHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHHHH
Confidence 456777777766666654 79999999999999886644458999999999999887 57779999999888766
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCC-----CCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhh
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKL-----SPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELED 201 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~-----~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~ 201 (504)
......+++..+|+.||.|++|.|+.+++ . .+.. .......++... .+.+.++|+.+|.|+||.|+++||..
T Consensus 86 ~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~ 164 (183)
T 1s6c_A 86 LRGTVHEKLRWTFNLYDINKDGYINKEEMMD-IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 164 (183)
T ss_dssp HHCCHHHHHHHHHHHHCTTCSSCEEHHHHHH-HHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred cCCCHHHHHHHHHHHhCCCCCCeEcHHHHHH-HHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 55555578999999999999999999988 5 3311 100000122222 27789999999999999999999999
Q ss_pred hhccCCC
Q 010673 202 LFLTAPE 208 (504)
Q Consensus 202 l~~~~p~ 208 (504)
++...|.
T Consensus 165 ~~~~~~~ 171 (183)
T 1s6c_A 165 SXQEDDN 171 (183)
T ss_dssp HTTSCCH
T ss_pred HHhcChH
Confidence 9876654
No 215
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.56 E-value=1.8e-15 Score=132.90 Aligned_cols=142 Identities=15% Similarity=0.129 Sum_probs=105.0
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
++++++.++++|..+|.|+||.|+.+||. .+. .+|..+ ++..+++.++.+ ++|.|++++|+.++......
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el~-~l~-~~~~~~---~~~~~~~~~D~~-----~~g~i~~~ef~~~~~~~~~~ 70 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFM-SLP-ELQQNP---LVQRVIDIFDTD-----GNGEVDFKEFIEGVSQFSVK 70 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHHT-TSG-GGTTCT---THHHHHHHHCTT-----CSSSBCHHHHHHHHGGGCSS
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHHH-Hhh-ccccch---HHHHHHHHHCCC-----CCCcCcHHHHHHHHHHHccc
Confidence 46789999999999999999999999994 323 234443 788899999876 46779999999887654433
Q ss_pred C-CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 132 G-RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 132 ~-~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
+ ..+.++.+|+.||.|++|.|+.++| . .+....+ ..++.... +.+..+|+.+|.|+||.|+++||..++...
T Consensus 71 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~-~l~~~~~--~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 71 GDKEQKLRFAFRIYDMDKDGYISNGELFQ-VLKMMVG--NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp CCHHHHHHHHHHHHCTTCSSCBCHHHHHH-HHHHHHG--GGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHhCCCCCCcCcHHHHHH-HHHHHhc--cCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 3 3367999999999999999999988 5 3210000 01222222 334444555999999999999999998864
No 216
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.55 E-value=3e-15 Score=140.90 Aligned_cols=151 Identities=15% Similarity=0.157 Sum_probs=118.0
Q ss_pred cCcchHHHHHHHHHhHhhhcCC--CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHD--MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d--~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...|++++++.++++|..+|.| +||.|+.+||..++.. +....+..+..+++.++.+ ++|.|++++|+.++
T Consensus 39 ~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d-----~dG~I~~~Ef~~~~ 111 (226)
T 2zfd_A 39 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTK-----HNGILGFEEFARAL 111 (226)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSS-----CSSSBCHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCC-----CCCcCcHHHHHHHH
Confidence 3568999999999999999999 9999999999988764 3334445567799999876 46779999999877
Q ss_pred HHHHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCC---CCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHH
Q 010673 126 ALFIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTK---LSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAEL 199 (504)
Q Consensus 126 ~~~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~---~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~ 199 (504)
...... ...+.+..+|+.||.|++|.|+.++| . .+. ...+ ..++.... +.+.++|+.+|.|+||.|+++||
T Consensus 112 ~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~-~l~~~~~~~g--~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF 188 (226)
T 2zfd_A 112 SVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQ-MVVATLAESG--MNLKDTVIEDIIDKTFEEADTKHDGKIDKEEW 188 (226)
T ss_dssp HHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHH-HHHHHHHHTT--CCCCHHHHHHHHHHHHHHHCSSCSSEECHHHH
T ss_pred HHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHH-HHHHHHHHcC--CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 654332 23457999999999999999999998 5 331 0111 13444443 55678999999999999999999
Q ss_pred hhhhccCCC
Q 010673 200 EDLFLTAPE 208 (504)
Q Consensus 200 ~~l~~~~p~ 208 (504)
..++...|.
T Consensus 189 ~~~~~~~~~ 197 (226)
T 2zfd_A 189 RSLVLRHPS 197 (226)
T ss_dssp HHHHHHSGG
T ss_pred HHHHHhChH
Confidence 999987765
No 217
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.54 E-value=6e-15 Score=142.22 Aligned_cols=180 Identities=12% Similarity=0.103 Sum_probs=128.5
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHH---HcCC--CCCHHHHHHHH----HHhhhhccCCcCCCCCCHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVK---CFNA--PLQPAEIVGVK----RVVQEKQHDGVNDLGLTLS 119 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~---~~g~--~~~~~e~~~~~----~~~~~~~~~~~~~~~i~~~ 119 (504)
..+++...++|+++|..||.|+||.|+.+||..+++. .+|. .++++++..++ ..++.+ ++|.|+++
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d-----~~g~i~~~ 77 (272)
T 2be4_A 3 SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDAT-----FDGRLQIE 77 (272)
T ss_dssp CCCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHT-----CCSEEEHH
T ss_pred HHHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCC-----CCCcEeHH
Confidence 3456667788999999999999999999999999773 5698 99999999876 445554 46669999
Q ss_pred hHHHHHH-----------HHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC---CCCccccChhHH-HHHHHhh
Q 010673 120 GFLFLHA-----------LFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS---PDQSVELASEAV-EFLRGIF 183 (504)
Q Consensus 120 ~Fl~l~~-----------~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~---~~~~~~l~~~~~-~~l~~lf 183 (504)
+|+.++. ........++++.+|+.||.|++|.|+.++| . .+... .+ ..++.... ..+..+|
T Consensus 78 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~-~l~~~~~~~g--~~~~~~~~~~~~~~~~ 154 (272)
T 2be4_A 78 ELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKN-FLKDLFLQHK--KKIPPNKLDEYTDAMM 154 (272)
T ss_dssp HHHHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHH-HHHHHHHHTT--CCCCHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHH-HHHHHHHhcC--CCCCHHHHHHHHHHHH
Confidence 9997731 1111344578999999999999999999998 5 33100 00 12333332 4567799
Q ss_pred hhhcCCCCCCCCHHHHhhhhccCCCCCCCCC--------------ccccccccccCCcccHHHHHHh
Q 010673 184 GLYDIDNDGAVRPAELEDLFLTAPESPWDEA--------------PYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 184 ~~~D~d~dG~l~~~e~~~l~~~~p~~p~~~~--------------~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
+.+|.|+||.|+++||..++...+...|... ........+..|.|+...+...
T Consensus 155 ~~~D~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~ 221 (272)
T 2be4_A 155 KIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGF 221 (272)
T ss_dssp HHHCSSCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHH
T ss_pred HHhccCCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHH
Confidence 9999999999999999999887544333211 0112234556788887776433
No 218
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=99.54 E-value=3.6e-14 Score=131.51 Aligned_cols=161 Identities=12% Similarity=0.062 Sum_probs=98.7
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhh----------Hhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG----------VKKIL 350 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~----------~~~~~ 350 (504)
.....+|+++|++|||||||+|+|++..+...+.++.+.......+.+. + ...+||++|... +....
T Consensus 23 ~~~~~~v~lvG~~g~GKSTLl~~l~g~~~~~~~~~~~G~~~~~~~~~~~-~--~~~l~Dt~G~~~~~~~~~~~~~~~~~~ 99 (210)
T 1pui_A 23 SDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA-D--GKRLVDLPGYGYAEVPEEMKRKWQRAL 99 (210)
T ss_dssp CSCSEEEEEEECTTSSHHHHHTTTCCC-------------CCEEEEEEE-T--TEEEEECCCCC------CCHHHHHHHH
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHhCCCccccccCCCccceeeEEEEec-C--CEEEEECcCCcccccCHHHHHHHHHHH
Confidence 4567899999999999999999999887543344454443333334444 2 345788888621 11111
Q ss_pred h-hhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc---hHHHHHHHHHhCC-
Q 010673 351 S-NKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA---VQDSARVTQELGI- 425 (504)
Q Consensus 351 ~-~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~---~~~~~~~~~~~~~- 425 (504)
. .......++++++|+|++++.++.. ..+...+.. .++|+++|+||+|+.+..+. ...+..++...+.
T Consensus 100 ~~~~~~~~~~~~~~~v~d~~~~~~~~~-~~~~~~~~~------~~~~~~~v~nK~D~~s~~~~~~~~~~~~~~~~~~~~~ 172 (210)
T 1pui_A 100 GEYLEKRQSLQGLVVLMDIRHPLKDLD-QQMIEWAVD------SNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGD 172 (210)
T ss_dssp HHHHHHCTTEEEEEEEEETTSCCCHHH-HHHHHHHHH------TTCCEEEEEECGGGSCHHHHHHHHHHHHHHHGGGCSC
T ss_pred HHHHHhhhcccEEEEEEECCCCCchhH-HHHHHHHHH------cCCCeEEEEecccCCCchhHHHHHHHHHHHHHhcCCC
Confidence 0 0112257899999999998876543 122222222 27899999999998764321 2244455555542
Q ss_pred CCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 426 EPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 426 ~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
..++++||++ .|++++++.|.+.+..
T Consensus 173 ~~~~~~Sal~~~~~~~l~~~l~~~~~~ 199 (210)
T 1pui_A 173 VQVETFSSLKKQGVDKLRQKLDTWFSE 199 (210)
T ss_dssp EEEEECBTTTTBSHHHHHHHHHHHHC-
T ss_pred CceEEEeecCCCCHHHHHHHHHHHHhh
Confidence 2368999999 9999999999987643
No 219
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.53 E-value=6.9e-16 Score=131.69 Aligned_cols=129 Identities=13% Similarity=0.063 Sum_probs=104.0
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH---HhcCCc
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF---IEKGRL 134 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~---~~~~~~ 134 (504)
+++++|..+|.|+||.|+.+|+..++. .+|..++++++..+++.++.+ ++|.|++++|+.++... ......
T Consensus 1 ~l~~~F~~~D~~~~g~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~~-----~~g~i~~~ef~~~~~~~~~~~~~~~~ 74 (134)
T 1jfj_A 1 MAEALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDAD-----GNGEIDQNEFAKFYGSIQGQDLSDDK 74 (134)
T ss_dssp CHHHHHHHHCTTCSSEEEHHHHHHHHH-TTCCSSHHHHHHHHHHHHCSS-----CCSEEEHHHHHHHTTCSSCCSSHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHcCC-----CCCeEcHHHHHHHHHHhcccccCCCH
Confidence 378999999999999999999999876 569999999999999999876 46669999999776310 001123
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhh
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLF 203 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~ 203 (504)
+++..+|+.+|.|++|.|+.+++ . .+. .++... +.++|+.+|.|+||.|+++||.+++
T Consensus 75 ~~~~~~f~~~D~d~~G~i~~~e~~~-~l~-------~~~~~~---~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 75 IGLKVLYKLMDVDGDGKLTKEEVTS-FFK-------KHGIEK---VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHH-HHT-------TTTCHH---HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCccCHHHHHH-HHH-------HhCHHH---HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 46999999999999999999988 5 331 122211 8899999999999999999998765
No 220
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.53 E-value=1.1e-15 Score=141.87 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=109.8
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++++.++++|..+|.|+||.|+.+||..+. .+|.+++.++ +++.++.+ ++|.|+|++|+.++..
T Consensus 20 ~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~--~lg~~~~~~~---l~~~~d~~-----~~g~i~~~EF~~~~~~ 89 (208)
T 2ct9_A 20 ETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP--ELAINPLGDR---IINAFFSE-----GEDQVNFRGFMRTLAH 89 (208)
T ss_dssp HHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH--HHHTSTTHHH---HHHTTSCT-----TCSCEEHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--HcCCCCcHHH---HHHHHcCC-----CCCcCcHHHHHHHHHh
Confidence 356889999999999999999999999999998863 4677777644 55666554 4677999999987764
Q ss_pred HHhc----------------CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCC
Q 010673 128 FIEK----------------GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDID 189 (504)
Q Consensus 128 ~~~~----------------~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d 189 (504)
+... ...+.++.+|+.||.|++|.|+.++| . .+....+. .++.... ..+..+|+.+|.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~-~l~~~~g~--~~s~~~~~~l~~~~~~~~D~d 166 (208)
T 2ct9_A 90 FRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQ-VLRMMVGV--NISDEQLGSIADRTIQEADQD 166 (208)
T ss_dssp TSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHH-HHHHHSCT--TCCHHHHHHHHHHHHHHHCSS
T ss_pred hccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHH-HHHHHhCC--CCCHHHHHHHHHHHHHHhCCC
Confidence 4321 13467999999999999999999999 5 33110011 2333332 3344559999999
Q ss_pred CCCCCCHHHHhhhhccC
Q 010673 190 NDGAVRPAELEDLFLTA 206 (504)
Q Consensus 190 ~dG~l~~~e~~~l~~~~ 206 (504)
+||.|+++||..++...
T Consensus 167 ~dG~Is~~EF~~~~~~~ 183 (208)
T 2ct9_A 167 GDSAISFTEFVKVLEKV 183 (208)
T ss_dssp SSSSEEHHHHHHTTTTS
T ss_pred CCCcCcHHHHHHHHhcc
Confidence 99999999999988764
No 221
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=99.53 E-value=8.2e-15 Score=143.82 Aligned_cols=157 Identities=17% Similarity=0.140 Sum_probs=99.7
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCC------CCC-----------------------ccc-------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENY------APT-----------------------TGE------------- 319 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~------~~T-----------------------~~~------------- 319 (504)
...++|+|+|.+|||||||+|+|++..+.... .|+ +..
T Consensus 24 ~~~~~i~vvG~~~~GKSSLln~l~g~~~~~~~~~~~t~~p~~~~~~~~~~~~~~~~~~~g~~~tt~~~~~~~~~~~~~~i 103 (299)
T 2aka_B 24 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRV 103 (299)
T ss_dssp CCCCEEEEEEBTTSCHHHHHHHHHTSCCSCCCSSCSCSSCEEEEEEECSSCEEEETTSTTCCBCCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHCCCcCCCCCCcccccceEEEEecCCcccchhhhcCCcccCCHHHHHHHHHHHHHHh
Confidence 46689999999999999999999999874221 121 110
Q ss_pred ----------eEEEEEEEcCCCcEEEEEEecCChh-------------hHhhhhhhhhhcccccEEE-EEEeCCCcccHH
Q 010673 320 ----------QYAVNVVDQPGGNKKTLILQEIPEE-------------GVKKILSNKEALASCDVTI-FVYDSSDEYSWK 375 (504)
Q Consensus 320 ----------~~~~~~v~~~~~~~~~li~d~~g~~-------------~~~~~~~~~~~~~~ad~ii-lV~D~s~~~s~~ 375 (504)
..... +..+ +...+.+||++|.. .+..+. ..+++.++.++ +|+|+++..+..
T Consensus 104 ~g~~~gi~~~~~~~~-~~~~-~~~~l~lvDtpG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~il~v~d~~~~~~~~ 179 (299)
T 2aka_B 104 TGTNKGISPVPINLR-VYSP-HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML--MQFVTKENCLILAVSPANSDLANS 179 (299)
T ss_dssp CSSTTCCCSCCEEEE-EEET-TCCSEEEEECCCBCSSCCSSSCTTHHHHHHHHH--HHHHTSTTEEEEEEEESSSCGGGC
T ss_pred cccCCCccccceEEE-EeCC-CCCCceEEeCCCCCCCcCCCCCchHHHHHHHHH--HHHHcCCCeEEEEEecCCcchhhh
Confidence 00000 1111 12467789999853 122232 45777888666 799998865544
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHH--hCCCCeEEEeccc-cCHHHHHHHHHHH
Q 010673 376 RTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQE--LGIEPPIPVSMKS-KDLNNVFSRIIWA 448 (504)
Q Consensus 376 ~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~--~~~~~~~~vSak~-~gi~el~~~l~~~ 448 (504)
....++..+.. .+.|+++|+||+|+...... .+..+..... .+..+++++||++ .|++++++.|.+.
T Consensus 180 ~~~~~~~~~~~------~~~~~i~V~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~v~~~SA~~~~gi~~l~~~l~~~ 250 (299)
T 2aka_B 180 DALKIAKEVDP------QGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAE 250 (299)
T ss_dssp HHHHHHHHHCT------TCSSEEEEEECGGGSCTTCCCHHHHTTCSSCCTTCEEECCCCCCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHhCC------CCCeEEEEEEccccCCCCchHHHHHhCCcCcCCCCcEEEECCChhhccccccHHHHHHHH
Confidence 44445555532 37899999999999765442 2221110001 1222478899999 9999999999874
No 222
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.52 E-value=2.3e-15 Score=131.19 Aligned_cols=135 Identities=8% Similarity=0.042 Sum_probs=109.5
Q ss_pred cchHHHHHHHHHhHhhhcCCC-CCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDM-DGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~-dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
.-..++++.++++|..||.|+ ||.|+.+||..+++. +|.+++.+++..++..++.+ |++++|+.++...
T Consensus 7 ~~~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~---------i~~~eF~~~~~~~ 76 (146)
T 2qac_A 7 IQQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELYGDN---------LTYEQYLEYLSIC 76 (146)
T ss_dssp HHHHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSE---------ECHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC---------CCHHHHHHHHHHH
Confidence 334677889999999999999 999999999999774 69999999999999988432 9999999887654
Q ss_pred Hhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 129 IEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 129 ~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
... ...+.+..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+ |+||.|+++||..++.
T Consensus 77 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 77 VHDKDNVEELIKMFAHFDNNCTGYLTKSQMKN-IL-------TTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp CCTTCCHHHHHHHHHTTCTTCSSEEEHHHHHH-HH-------HHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred hcCcchHHHHHHHHHHhCCCCCCCCCHHHHHH-HH-------HHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 432 33467999999999999999999988 5 33 1222222 26688888888 9999999999998764
No 223
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.52 E-value=3.6e-15 Score=138.10 Aligned_cols=151 Identities=15% Similarity=0.141 Sum_probs=117.2
Q ss_pred CcchHHHHHHHHHhHhhhcCC--CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHD--MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d--~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..+++++++.++++|..+|.| +||.|+.+|+..++.. .....+..++.+++.++.+ ++|.|++++|+.++.
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d-----~~g~i~~~Ef~~~~~ 101 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVK-----RNGVIEFGEFVRSLG 101 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTT-----CSSEECHHHHHHHHG
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCC-----CCCeEeHHHHHHHHH
Confidence 468899999999999999999 9999999999888764 3344455677799999876 466699999998776
Q ss_pred HHHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCC---CCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHh
Q 010673 127 LFIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTK---LSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELE 200 (504)
Q Consensus 127 ~~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~---~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~ 200 (504)
..... ...+++..+|+.||.|++|.|+.++| . .+. ...+ ..++.... +.+..+|+.+|.|+||.|+++||.
T Consensus 102 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~-~l~~~~~~~g--~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~ 178 (207)
T 2ehb_A 102 VFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKE-MVVALLHESE--LVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178 (207)
T ss_dssp GGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHH-HHHHHHHHHT--CCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred HHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHH-HHHHHHHHcc--cccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 54322 23467999999999999999999988 5 331 0001 13444433 556789999999999999999999
Q ss_pred hhhccCCCC
Q 010673 201 DLFLTAPES 209 (504)
Q Consensus 201 ~l~~~~p~~ 209 (504)
.++...|.+
T Consensus 179 ~~~~~~~~~ 187 (207)
T 2ehb_A 179 DFVSLNPSL 187 (207)
T ss_dssp HHHHHCGGG
T ss_pred HHHHhChHH
Confidence 999987754
No 224
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.52 E-value=1e-14 Score=132.17 Aligned_cols=144 Identities=19% Similarity=0.197 Sum_probs=112.8
Q ss_pred ccCcchHHHHHHHHHhHhhhcC-----CC-C--CccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCC-CC
Q 010673 47 DEQTLKPRCVRALKRIFIICDH-----DM-D--GALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLG-LT 117 (504)
Q Consensus 47 ~~~~l~~~~~~~l~~~F~~~D~-----d~-d--G~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~-i~ 117 (504)
....|++++++.++++|..+|. |+ | |.|+.+||.. ++ .+|.+++.++ ++..++.+ ++|. |+
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~-~~g~~~~~~~---l~~~~D~d-----~~G~~I~ 79 (183)
T 1dgu_A 10 DLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LP-ELKANPFKER---ICRVFSTS-----PAKDSLS 79 (183)
T ss_dssp CCCSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-ST-TSSSCTTHHH---HHHHHSCS-----SSSCCCC
T ss_pred HHcCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HH-hhhcCcHHHH---HHHHhCCC-----CCCCEec
Confidence 3567899999999999999999 68 8 9999999998 44 6799988765 45556655 5788 99
Q ss_pred HHhHHHHHHHHHhcCC-chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccCh-----hHH-HHHH----Hhhhh
Q 010673 118 LSGFLFLHALFIEKGR-LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELAS-----EAV-EFLR----GIFGL 185 (504)
Q Consensus 118 ~~~Fl~l~~~~~~~~~-~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~-----~~~-~~l~----~lf~~ 185 (504)
|++|+.++........ .+.+..+|+.||.|++|.|+.++| . .+ ..++. ... +++. .+|+.
T Consensus 80 ~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~-~l-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (183)
T 1dgu_A 80 FEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR-LV-------NCLTGEGEDTRLSASEMKQLIDNILEE 151 (183)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHH-HH-------HHHHSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHH-HH-------HHHhcccccCCCCHHHHHHHHHHHHHH
Confidence 9999988775543323 357999999999999999999988 5 32 11111 122 3344 59999
Q ss_pred hcCCCCCCCCHHHHhhhhccCCC
Q 010673 186 YDIDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 186 ~D~d~dG~l~~~e~~~l~~~~p~ 208 (504)
+|.|+||.|+++||..++...|.
T Consensus 152 ~D~d~dG~I~~~EF~~~~~~~~~ 174 (183)
T 1dgu_A 152 SDIDRDGTINLSEFQHVISRSPD 174 (183)
T ss_dssp HCTTSSSEEEHHHHHHHHCSSCH
T ss_pred hCCCCCCeEcHHHHHHHHHhChH
Confidence 99999999999999999987653
No 225
>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=99.51 E-value=7.5e-14 Score=144.30 Aligned_cols=150 Identities=18% Similarity=0.228 Sum_probs=100.4
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCC------------CCCCccceE---------------------EEEEEEc
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSEN------------YAPTTGEQY---------------------AVNVVDQ 328 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~------------~~~T~~~~~---------------------~~~~v~~ 328 (504)
+..++|+++|.+|+|||||+++|++...... ..+|++..+ ....+..
T Consensus 22 ~~~~~i~iiG~~~~GKSTLi~~Ll~~~~~i~~~~~~~i~~~s~~~gt~~~~~~~~~~~d~~~~E~~rGiTi~~~~~~~~~ 101 (434)
T 1zun_B 22 KEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQAEREQGITIDVAYRYFST 101 (434)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHHHTTCC------------------CCC--CHHHHHHHHC-----CCCCCEEEEEEC
T ss_pred CCceEEEEEECCCCCHHHHHHHHHhhcCCCchhhhhhhhhhhhccCccccchhhhhhhccChhHHHCCcEEEeeeeEeec
Confidence 4568999999999999999999986542110 112322111 1222333
Q ss_pred CCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCC
Q 010673 329 PGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKP 408 (504)
Q Consensus 329 ~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~ 408 (504)
. ...+.+||++|++.+.... ..++..+|++|+|+|+++....+. .+++..+... ...|+++|+||+|+..
T Consensus 102 ~--~~~~~iiDtpGh~~f~~~~--~~~~~~aD~~ilVvDa~~g~~~qt-~~~l~~~~~~-----~~~~iIvviNK~Dl~~ 171 (434)
T 1zun_B 102 A--KRKFIIADTPGHEQYTRNM--ATGASTCDLAIILVDARYGVQTQT-RRHSYIASLL-----GIKHIVVAINKMDLNG 171 (434)
T ss_dssp S--SEEEEEEECCCSGGGHHHH--HHHHTTCSEEEEEEETTTCSCHHH-HHHHHHHHHT-----TCCEEEEEEECTTTTT
T ss_pred C--CceEEEEECCChHHHHHHH--HHHHhhCCEEEEEEECCCCCcHHH-HHHHHHHHHc-----CCCeEEEEEEcCcCCc
Confidence 3 3567899999998775544 457899999999999998764443 4444444432 1236999999999986
Q ss_pred Ccc-----chHHHHHHHHHhC--CC--CeEEEeccc-cCHHHH
Q 010673 409 YTM-----AVQDSARVTQELG--IE--PPIPVSMKS-KDLNNV 441 (504)
Q Consensus 409 ~~~-----~~~~~~~~~~~~~--~~--~~~~vSak~-~gi~el 441 (504)
... ...+..++++.++ .. +++++||++ .|++++
T Consensus 172 ~~~~~~~~i~~~~~~~~~~~g~~~~~~~~i~vSA~~g~gi~~~ 214 (434)
T 1zun_B 172 FDERVFESIKADYLKFAEGIAFKPTTMAFVPMSALKGDNVVNK 214 (434)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCCCSEEEEEECCTTTCTTTSSC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccCceEEEEeccCCCCcccc
Confidence 321 1235667777777 22 489999999 999884
No 226
>3p26_A Elongation factor 1 alpha-like protein; GTP/GDP binding domain, beta-barrel, translational GTPase, D structural genomics; 2.50A {Saccharomyces cerevisiae} PDB: 3p27_A*
Probab=99.51 E-value=4.3e-14 Score=148.12 Aligned_cols=150 Identities=16% Similarity=0.106 Sum_probs=96.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCC-------------------------------C-CCCccceEEEEEEEc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSEN-------------------------------Y-APTTGEQYAVNVVDQ 328 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~-------------------------------~-~~T~~~~~~~~~v~~ 328 (504)
.+..+||+++|.+|+|||||+++|++...... . .+.+. ......+..
T Consensus 30 ~k~~~ki~iiG~~~~GKSTLi~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~e~~~GiTi-~~~~~~~~~ 108 (483)
T 3p26_A 30 ALPHLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTV-SICTSHFST 108 (483)
T ss_dssp SCCEEEEEEESCGGGTHHHHHHHHHHHTTSSCHHHHHHHCC------------------------CCSSC-CCCEEEEEC
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHhcCCccHHHHHHHHHHHHhcCCCcchhhhhhccchhHhhcCcce-EeeeEEEec
Confidence 35679999999999999999999986521100 0 11111 112222443
Q ss_pred CCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHH------HHHHHHHHHHHhccCCCCCCcEEEEEE
Q 010673 329 PGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWK------RTKELLVEVARLGEDSGYGVPCLLIAS 402 (504)
Q Consensus 329 ~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~------~~~~~~~~l~~~~~~~~~~~piilV~N 402 (504)
. ...+.+||++|++.+.... ..++..+|++|+|+|++++.++. ...+.+..+... ...|+|+|+|
T Consensus 109 ~--~~~~~iiDTPG~~~f~~~~--~~~~~~aD~~llVvDa~~g~~~~~~~~~~qt~e~~~~~~~~-----~~~~iIvviN 179 (483)
T 3p26_A 109 H--RANFTIVDAPGHRDFVPNA--IMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSL-----GIHNLIIAMN 179 (483)
T ss_dssp S--SCEEEEECCCCCGGGHHHH--HHHHTTCSEEEEEEECCC------CCCCHHHHHHHHHHHHT-----TCCCEEEEEE
T ss_pred C--CceEEEEECCCcHHHHHHH--HHhhhhCCEEEEEEECCCCccccccchhhhHHHHHHHHHHc-----CCCcEEEEEE
Confidence 3 4678899999998876554 55889999999999999875432 222233333322 2357999999
Q ss_pred CCCCCCCccc-----hHHHHHHHHHhCCC----CeEEEeccc-cCHHH
Q 010673 403 KDDLKPYTMA-----VQDSARVTQELGIE----PPIPVSMKS-KDLNN 440 (504)
Q Consensus 403 K~Dl~~~~~~-----~~~~~~~~~~~~~~----~~~~vSak~-~gi~e 440 (504)
|+|+....+. ...+..+.+.++.. +++++||++ .|+++
T Consensus 180 K~Dl~~~~~~~~~~i~~~~~~~l~~~g~~~~~~~~i~iSA~~g~gi~e 227 (483)
T 3p26_A 180 KMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYK 227 (483)
T ss_dssp CGGGGTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEEECCSSSCTTSSS
T ss_pred CcCcccchHHHHHHHHHHHHHHHHHcCCCcccceEEEEeeecCCCccc
Confidence 9999863322 12455555666652 479999999 99875
No 227
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.50 E-value=9.1e-15 Score=133.18 Aligned_cols=146 Identities=14% Similarity=0.130 Sum_probs=113.7
Q ss_pred HHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 57 RALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 57 ~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
++++++|..||.+ +||.|+.+|+..++..+++...+..++..+++.++.+ ++|.|++++|+.++.........+
T Consensus 25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d-----~~g~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1g8i_A 25 KEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDEN-----KDGRIEFSEFIQALSVTSRGTLDE 99 (190)
T ss_dssp HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTT-----CSSEEEHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcC-----CCCeEeHHHHHHHHHHhcCCCHHH
Confidence 3467788899998 9999999999999987766667888999999999877 466699999998877655545557
Q ss_pred hHHHHHHhhcCCCCccccCCCC-CCCCCCC---CCCcc--ccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCC
Q 010673 136 TTWAVLRKFGYGDDLELRDDFL-PVPTKLS---PDQSV--ELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~---~~~~~--~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~ 208 (504)
++..+|+.||.|++|.|+.+++ . .+..- .+... ..+... .+.+.++|+.+|.|+||.|+++||..++...|.
T Consensus 100 ~~~~~f~~~D~d~~G~i~~~e~~~-~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~~ 178 (190)
T 1g8i_A 100 KLRWAFKLYDLDNDGYITRNEMLD-IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS 178 (190)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHH-HHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHH
T ss_pred HHHHHHHhhcCCCCCeECHHHHHH-HHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhChH
Confidence 8999999999999999999988 5 32110 00000 011122 377999999999999999999999999887654
No 228
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.50 E-value=2.3e-14 Score=135.23 Aligned_cols=150 Identities=13% Similarity=0.108 Sum_probs=115.9
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
.+++++++.+++.|.. .|+||.|+.+|+..++...++...+...+..+++.+|.+ ++|.|++++|+..+..+.
T Consensus 60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d-----~~G~I~~~Ef~~~l~~~~ 132 (229)
T 3dd4_A 60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTD-----HNGAVSFEDFIKGLSILL 132 (229)
T ss_dssp HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSS-----CCSSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCC-----CCCeEeHHHHHHHHHHHc
Confidence 4667777777777755 688999999999999998888888999999999999877 567799999998887666
Q ss_pred hcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCC-----CCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhh
Q 010673 130 EKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKL-----SPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDL 202 (504)
Q Consensus 130 ~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~-----~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l 202 (504)
.....+.+..+|+.||.|++|.|+.++| . .+.. .......++.... +.+.++|+.+|.|+||.|+++||.++
T Consensus 133 ~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~ 211 (229)
T 3dd4_A 133 RGTVQEKLNWAFNLYDINKDGYITKEEMLD-IMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES 211 (229)
T ss_dssp HSCHHHHHHHHHHHHCTTCSSCCBHHHHHH-HHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCCCCeECHHHHHH-HHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence 5555578999999999999999999988 5 3210 0000001111222 67899999999999999999999999
Q ss_pred hccCC
Q 010673 203 FLTAP 207 (504)
Q Consensus 203 ~~~~p 207 (504)
+...|
T Consensus 212 ~~~~~ 216 (229)
T 3dd4_A 212 CQKDE 216 (229)
T ss_dssp HHTCH
T ss_pred HHhCH
Confidence 88654
No 229
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.50 E-value=3.4e-14 Score=133.55 Aligned_cols=150 Identities=12% Similarity=0.098 Sum_probs=113.8
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
.+++++++.+.++|+.. |+||.|+.+|+..++.......++++++..+++.+|.+ ++|.|++++|+.++....
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d-----~~G~I~~~Ef~~~l~~~~ 119 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTT-----QTGSVKFEDFVTALSILL 119 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTT-----CSSCBCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCC-----CCCcEeHHHHHHHHHHHc
Confidence 36666665555555443 59999999999999886544458999999999999887 577799999998877665
Q ss_pred hcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCC-----CCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhh
Q 010673 130 EKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKL-----SPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDL 202 (504)
Q Consensus 130 ~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~-----~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l 202 (504)
.....++++.+|+.||.|++|.|+.++| . .+.. .......++... .+.+.++|+.+|.|+||.|+++||..+
T Consensus 120 ~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~-~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~ 198 (224)
T 1s1e_A 120 RGTVHEKLRWTFNLYDINKDGYINKEEMMD-IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLES 198 (224)
T ss_dssp HCCHHHHHHHHHHHHCTTCCSEECHHHHHH-HHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCCCCCeECHHHHHH-HHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 5555578999999999999999999988 5 3311 100001133222 377899999999999999999999999
Q ss_pred hccCC
Q 010673 203 FLTAP 207 (504)
Q Consensus 203 ~~~~p 207 (504)
+...|
T Consensus 199 ~~~~~ 203 (224)
T 1s1e_A 199 CQEDD 203 (224)
T ss_dssp HHTCH
T ss_pred HHhCH
Confidence 88764
No 230
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.50 E-value=5.4e-16 Score=140.91 Aligned_cols=143 Identities=9% Similarity=0.009 Sum_probs=109.9
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHH-----cCCCCCHHHHHHHH---------HHhhhhccCCcCC
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKC-----FNAPLQPAEIVGVK---------RVVQEKQHDGVND 113 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~-----~g~~~~~~e~~~~~---------~~~~~~~~~~~~~ 113 (504)
...|++++++.++++|..||+|+||.|+.+||..+++.. +|.+++.+++..++ ..++.+ ++
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d-----~d 79 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRIS-----VE 79 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEE-----HH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCC-----CC
Confidence 356889999999999999999999999999999998643 59999999999886 555554 35
Q ss_pred CCCCHHhHHHHHHHHHh-cCCchhHHHHH--HhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcC
Q 010673 114 LGLTLSGFLFLHALFIE-KGRLETTWAVL--RKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDI 188 (504)
Q Consensus 114 ~~i~~~~Fl~l~~~~~~-~~~~e~~~~~~--~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~ 188 (504)
|.|++++ .++..... ....+++..+| +.||.|++|.|+.++| . .+ ..++... .+++.++|+.+|.
T Consensus 80 g~I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~-~l-------~~~g~~~~~~~~~~~~~~~D~ 149 (186)
T 2hps_A 80 EAAVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKA-FL-------QAVGPDLTDDKAITCFNTLDF 149 (186)
T ss_dssp HHHHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHH-HH-------HHHCTTCCHHHHHHHHHHHCT
T ss_pred CcccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHH-HH-------HHhCCCCCHHHHHHHHHHHcC
Confidence 5699999 33322211 11224566666 8899999999999988 5 32 1222222 2778999999999
Q ss_pred CCCCCCCHHHHhhhhcc
Q 010673 189 DNDGAVRPAELEDLFLT 205 (504)
Q Consensus 189 d~dG~l~~~e~~~l~~~ 205 (504)
|+||.|+++||..++..
T Consensus 150 d~dG~i~~~ef~~~~~~ 166 (186)
T 2hps_A 150 NKNGQISRDEFLVTVND 166 (186)
T ss_dssp TCSSEEEHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHH
Confidence 99999999999988864
No 231
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.49 E-value=8.6e-15 Score=147.44 Aligned_cols=159 Identities=13% Similarity=0.127 Sum_probs=81.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCC-CCC--------CCccceEEEEEEEcCCCcEEEEEEecCCh-------hh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSE-NYA--------PTTGEQYAVNVVDQPGGNKKTLILQEIPE-------EG 345 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~-~~~--------~T~~~~~~~~~v~~~~~~~~~li~d~~g~-------~~ 345 (504)
...++|+|+|++|||||||+|+|.+..... .+. +|++.......+...+....+.+||++|. +.
T Consensus 35 ~~~~~I~vvG~~g~GKSTLln~L~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~l~i~DTpG~gd~~~~~e~ 114 (361)
T 2qag_A 35 GFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDC 114 (361)
T ss_dssp CCEECEEECCCTTSCHHHHHHHHTTCCC---------------CEEEEEEEEC----CEEEEEEEEC-------------
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHhCCCCCCCCcccCCCcccCCceeEEEEEEEeecCCcccceEEEEeccccccCccHHH
Confidence 446899999999999999999987754322 221 34333222222333322235678899887 33
Q ss_pred Hhhhhhh-----hhhcccc-------------cEEEEEEeCCCcccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCC
Q 010673 346 VKKILSN-----KEALASC-------------DVTIFVYDSSDEYSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDL 406 (504)
Q Consensus 346 ~~~~~~~-----~~~~~~a-------------d~iilV~D~s~~~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl 406 (504)
+..+... ..+++.+ |+++++++.+ ..++..+. .|+..+ ..++|+|+|+||+|+
T Consensus 115 ~~~i~~~i~~~~~~yl~~~~~~~r~~~~d~rv~~~vy~I~~~-~~~l~~~d~~~~~~l-------~~~~piIlV~NK~Dl 186 (361)
T 2qag_A 115 FKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPF-GHGLKPLDVAFMKAI-------HNKVNIVPVIAKADT 186 (361)
T ss_dssp -CCTHHHHHHHHHHHHHHHTCSCCC-CCCCCCCEEEEEECSS-SSSCCHHHHHHHHHT-------CS-SCEEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccCCceEEEEEEEecC-CCCcchhHHHHHHHh-------ccCCCEEEEEECCCC
Confidence 3333210 0233332 3444444432 34554443 344433 247999999999999
Q ss_pred CCCccchH---HHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 407 KPYTMAVQ---DSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 407 ~~~~~~~~---~~~~~~~~~~~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
...++... .+.++++.++++ ++++||++ .| ++.|..+.+.+.
T Consensus 187 ~~~~ev~~~k~~i~~~~~~~~i~-~~~~Sa~~~~~-~e~~~~l~~~i~ 232 (361)
T 2qag_A 187 LTLKERERLKKRILDEIEEHNIK-IYHLPDAESDE-DEDFKEQTRLLK 232 (361)
T ss_dssp SCHHHHHHHHHHHHHHTTCC-CC-SCCCC----------CHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCC-EEeCCCcCCCc-chhHHHHHHHHH
Confidence 87655432 566667777776 89999999 88 777777777664
No 232
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=99.49 E-value=1.1e-13 Score=150.65 Aligned_cols=164 Identities=15% Similarity=0.190 Sum_probs=107.2
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCC-CCCccceEEEE-------EEEcCCCc--------------------
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENY-APTTGEQYAVN-------VVDQPGGN-------------------- 332 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~-~~T~~~~~~~~-------~v~~~~~~-------------------- 332 (504)
.++.++|+|+|.+|||||||+|+|++..+.+.. .|++....... ++.+.++.
T Consensus 66 ~~~~~~V~VvG~~naGKSSLlNaLlg~~~~~v~~~p~T~~~~~i~~g~~~~~t~~~~~g~~~~~~~~~~i~~~~~i~~~~ 145 (695)
T 2j69_A 66 QQGVFRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTIDPAE 145 (695)
T ss_dssp HHCCEEEEEECCTTSCHHHHHHHHHTSSCSCCCCCTTTCCCEEEEECSSCEEEEEESSSCCCCEEEHHHHHHHSCCCHHH
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCCCCccceEEEEeCCCCeEEEEEcCCCcccccChhhhhhhhcCCHHH
Confidence 456799999999999999999999998875533 34432100000 11110010
Q ss_pred ----------------------------EEEEEEecCChhhHhh-hhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHH
Q 010673 333 ----------------------------KKTLILQEIPEEGVKK-ILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVE 383 (504)
Q Consensus 333 ----------------------------~~~li~d~~g~~~~~~-~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~ 383 (504)
..+.+||++|...... ...+..++..+|++|+|+|++++.+......|...
T Consensus 146 ~~~l~~~~~~~~~~v~~i~i~~p~~~l~~~l~LiDTPGl~~~~~~~~~~~~~i~~aD~vL~Vvda~~~~s~~e~~~l~~~ 225 (695)
T 2j69_A 146 AKKLEQEKKQAFPDVDYAVVEYPLTLLQKGIEIVDSPGLNDTEARNELSLGYVNNCHAILFVMRASQPCTLGERRYLENY 225 (695)
T ss_dssp HHHHHTSSCCSCTTEEEEEEEECCHHHHTTEEEEECCCHHHHHTCHHHHTHHHHSSSEEEEEEETTSTTCHHHHHHHHHH
T ss_pred HHHHhhccccccccceEEEEEccchhccCCeEEEECCCCCchhhHHHHHHHHHHhCCEEEEEEeCCCccchhHHHHHHHH
Confidence 2366799999754321 12235688999999999999999888776666544
Q ss_pred HHHhccCCCCCCcEEEEEECCCCCCCccc-------hH----HHHH-----HHHHhC-------CCCeEEEecc------
Q 010673 384 VARLGEDSGYGVPCLLIASKDDLKPYTMA-------VQ----DSAR-----VTQELG-------IEPPIPVSMK------ 434 (504)
Q Consensus 384 l~~~~~~~~~~~piilV~NK~Dl~~~~~~-------~~----~~~~-----~~~~~~-------~~~~~~vSak------ 434 (504)
+.. .+.|+++|+||+|+...... .+ .+.. +....+ ..++++|||+
T Consensus 226 l~~------~~~~iiiVlNK~Dl~~~~~~~~ee~e~l~~~~~~i~~~~~~~l~~~~~~~g~~~~~~~v~~vSAk~al~~~ 299 (695)
T 2j69_A 226 IKG------RGLTVFFLVNAWDQVRESLIDPDDVEELQASENRLRQVFNANLAEYCTVEGQNIYDERVFELSSIQALRRR 299 (695)
T ss_dssp TTT------SCCCEEEEEECGGGGGGGCSSTTCHHHHHHHHHHHHHHHHHHHGGGGBSSSCBCGGGTEEECCHHHHHHHH
T ss_pred HHh------hCCCEEEEEECcccccccccChhhHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCcEEEEeChHHHHhh
Confidence 432 26789999999998654300 00 1111 111111 1248999999
Q ss_pred --------c-cCHHHHHHHHHHHHh
Q 010673 435 --------S-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 435 --------~-~gi~el~~~l~~~~~ 450 (504)
+ .|++++++.|.+.+.
T Consensus 300 ~~~~~~~~~~~Gi~~L~~~L~~~l~ 324 (695)
T 2j69_A 300 LKNPQADLDGTGFPKFMDSLNTFLT 324 (695)
T ss_dssp HHCTTCCCTTSSHHHHHHHHHHHHH
T ss_pred ccCchhhhhccCHHHHHHHHHHHHH
Confidence 8 999999999988764
No 233
>3ohm_A Guanine nucleotide-binding protein G(Q) subunit A; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Mus musculus} PDB: 2bcj_Q* 2rgn_A* 3ah8_A*
Probab=99.49 E-value=8e-14 Score=137.32 Aligned_cols=126 Identities=12% Similarity=0.055 Sum_probs=94.4
Q ss_pred EEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCC----------CcccHHHHHHHHHHHHHhccCC
Q 010673 322 AVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSS----------DEYSWKRTKELLVEVARLGEDS 391 (504)
Q Consensus 322 ~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s----------~~~s~~~~~~~~~~l~~~~~~~ 391 (504)
....+.+. ...+.+||+.|++.++.+| ..++++++++|+|||++ +.+++.+...|+..+.....
T Consensus 158 ~~~~~~~~--~v~l~iwDtgGQe~~R~~w--~~yf~~~~~iIfV~dls~ydq~l~d~~~~nr~~es~~~~~~i~~~~~-- 231 (327)
T 3ohm_A 158 IEYPFDLQ--SVIFRMVDVGGQRSERRKW--IHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPW-- 231 (327)
T ss_dssp EEEEEEET--TEEEEEEEECCSHHHHTTG--GGGCSSCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTSGG--
T ss_pred EEEEEEee--ceeeEEEEcCCchhHHHHH--HHHhCCCCEEEEEEECccccccccccccHhHHHHHHHHHHHHhhhhc--
Confidence 33345554 3677899999999999988 56999999999999665 66778888888888875421
Q ss_pred CCCCcEEEEEECCCCCCCc-----------------cchHHHHHHHH----------HhCCCCeEEEeccc-cCHHHHHH
Q 010673 392 GYGVPCLLIASKDDLKPYT-----------------MAVQDSARVTQ----------ELGIEPPIPVSMKS-KDLNNVFS 443 (504)
Q Consensus 392 ~~~~piilV~NK~Dl~~~~-----------------~~~~~~~~~~~----------~~~~~~~~~vSak~-~gi~el~~ 443 (504)
..++|+++++||+|+...+ ...+++.++.. ..++. +++|||++ .||+++|.
T Consensus 232 ~~~~~iiL~~NK~DL~~~ki~~~~l~~~fp~y~g~~~~~e~a~~fi~~~F~~~~~~~~~~i~-~~~TsA~d~~nV~~vF~ 310 (327)
T 3ohm_A 232 FQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIY-SHFTCATDTENIRFVFA 310 (327)
T ss_dssp GTTCEEEEEEECHHHHHHHTTTSCGGGTCTTCCSCSSCHHHHHHHHHHHHHSSCTTTTSCEE-EEECCTTCHHHHHHHHH
T ss_pred cCCceEEEEEECchhhhhhhccchHhhhchhccCCCCCHHHHHHHHHHHHHhhcccccCCcE-EEEEEeecCHHHHHHHH
Confidence 3589999999999986533 22335555532 23333 68999999 99999999
Q ss_pred HHHHHHhCCCC
Q 010673 444 RIIWAAEHPHL 454 (504)
Q Consensus 444 ~l~~~~~~~~~ 454 (504)
.+.+.+...++
T Consensus 311 ~v~~~Il~~~l 321 (327)
T 3ohm_A 311 AVKDTILQLNL 321 (327)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhH
Confidence 99998876554
No 234
>1jny_A EF-1-alpha, elongation factor 1-alpha, EF-TU, TUF-1; GTPase, alpha/beta structure, protein biosynthesis, translation; HET: GDP; 1.80A {Sulfolobus solfataricus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1skq_A* 3agj_A*
Probab=99.49 E-value=5e-14 Score=145.60 Aligned_cols=157 Identities=13% Similarity=0.126 Sum_probs=101.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcC--CCCCCC-----------------------------CCCccceEEEEEEEcCC
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLER--PFSENY-----------------------------APTTGEQYAVNVVDQPG 330 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~--~~~~~~-----------------------------~~T~~~~~~~~~v~~~~ 330 (504)
+..++|+++|.+|+|||||+++|++. .+.... ...+........+...
T Consensus 4 k~~~~I~iiG~~~~GKSTLi~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~D~~~~E~~~giTi~~~~~~~~~~- 82 (435)
T 1jny_A 4 KPHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETK- 82 (435)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHC-----------CEEECS-
T ss_pred CCEEEEEEEeCCCCCHHHHHHHHHHHcCCcCHHHHhhhhhhhhhcCCcchhhhhhhccChHHHhcCceeEeeEEEEecC-
Confidence 45689999999999999999999864 222110 0111111122234443
Q ss_pred CcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccC-CCCC-CcEEEEEECCCCCC
Q 010673 331 GNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGED-SGYG-VPCLLIASKDDLKP 408 (504)
Q Consensus 331 ~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~-~~~~-~piilV~NK~Dl~~ 408 (504)
...+.+||++|++.+.... ..++..+|++|+|+|+++ .+|+....|..+..++... ...+ .|+++|+||+|+..
T Consensus 83 -~~~~~iiDtpG~~~f~~~~--~~~~~~aD~~ilVvDa~~-gsfe~~~~~~~qt~~~~~~~~~~~~~~iivviNK~Dl~~ 158 (435)
T 1jny_A 83 -KYFFTIIDAPGHRDFVKNM--ITGASQADAAILVVSAKK-GEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTE 158 (435)
T ss_dssp -SCEEEECCCSSSTTHHHHH--HHTSSCCSEEEEEEECST-THHHHHHSTTCHHHHHHHHHHHTTCTTCEEEEECGGGSS
T ss_pred -CeEEEEEECCCcHHHHHHH--HhhhhhcCEEEEEEECCC-CccccccccchHHHHHHHHHHHcCCCeEEEEEEcccCCC
Confidence 3578899999998876554 457899999999999998 6676443322222111000 0114 46999999999986
Q ss_pred Cc-------cchHHHHHHHHHhCC----CCeEEEeccc-cCHHHHHH
Q 010673 409 YT-------MAVQDSARVTQELGI----EPPIPVSMKS-KDLNNVFS 443 (504)
Q Consensus 409 ~~-------~~~~~~~~~~~~~~~----~~~~~vSak~-~gi~el~~ 443 (504)
.. ...+++.++++.+++ .+++++||++ .|+.++++
T Consensus 159 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~iSA~~g~~v~e~~~ 205 (435)
T 1jny_A 159 PPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNITHKSE 205 (435)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCCCTTCEEEECBTTTTBTTTBCCS
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCCcCCceEEEeecccCcccccccc
Confidence 31 112367778888774 2489999999 99986544
No 235
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.49 E-value=1.3e-14 Score=132.23 Aligned_cols=150 Identities=13% Similarity=0.060 Sum_probs=113.3
Q ss_pred cchHHHHHHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
.+++++ ++++|..||.+ +||.|+.+|+..+++.+.+...+.+++..++..+|.+ ++|.|++++|..++...
T Consensus 21 ~~~~~~---i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d-----~~G~i~~~ef~~~~~~~ 92 (190)
T 1fpw_A 21 YFDRRE---IQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKD-----NNGFIHFEEFITVLSTT 92 (190)
T ss_dssp CSTHHH---HHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSS-----CSSEECHHHHHHHHHHH
T ss_pred CCCHHH---HHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCC-----CCCcEeHHHHHHHHHHH
Confidence 456665 45566677776 8999999999999887755556778899999998776 46669999999887665
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCC---CCCCcc--ccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhh
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKL---SPDQSV--ELAS-EAVEFLRGIFGLYDIDNDGAVRPAELED 201 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~---~~~~~~--~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~ 201 (504)
......+++..+|+.||.|++|.|+.+++ . .+.. ..+... .... ...+.+.++|+.+|.|+||.|+++||..
T Consensus 93 ~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 171 (190)
T 1fpw_A 93 SRGTLEEKLSWAFELYDLNHDGYITFDEMLT-IVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp SCCCSTHHHHHHHHHHCSSCSSEEEHHHHHH-HHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred ccCCcHHHHHHHHHHhcCCCCCcCcHHHHHH-HHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 44455678999999999999999999888 5 3211 001000 0111 2237789999999999999999999999
Q ss_pred hhccCCC
Q 010673 202 LFLTAPE 208 (504)
Q Consensus 202 l~~~~p~ 208 (504)
++...|.
T Consensus 172 ~~~~~~~ 178 (190)
T 1fpw_A 172 GSKVDPS 178 (190)
T ss_dssp HHHSSTT
T ss_pred HHHhChH
Confidence 9987765
No 236
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase-RNA complex; HET: GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A* 3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G* 1efu_B
Probab=99.48 E-value=1.7e-13 Score=152.25 Aligned_cols=161 Identities=12% Similarity=0.064 Sum_probs=108.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCC-------CCC-------CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhH
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERP-------FSE-------NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV 346 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~-------~~~-------~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~ 346 (504)
....++|+++|.+++|||||+++|++.. +.. ....+.+.++....+.+..+...+.+||++|++.+
T Consensus 293 ~k~~lnIvIIGhvDvGKSTLInrLt~~~~~~G~a~f~~~a~lD~~~~ErerGITIdva~v~f~~~~~kI~IIDTPGHedF 372 (1289)
T 3avx_A 293 TKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADY 372 (1289)
T ss_dssp CCCEEEEEEEESTTSSHHHHHHHHHHHHHHHSCC---------------------CCSCEEEECSSCEEEEEECCCHHHH
T ss_pred cCCeeEEEEEcCCCCCHHHHHHHHHhhhccccccccccccccccccccccCceeEEEEEEEEcCCCEEEEEEECCChHHH
Confidence 4567999999999999999999998741 100 00112222221112223323467789999999887
Q ss_pred hhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCc-EEEEEECCCCCCCccc----hHHHHHHHH
Q 010673 347 KKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVP-CLLIASKDDLKPYTMA----VQDSARVTQ 421 (504)
Q Consensus 347 ~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~p-iilV~NK~Dl~~~~~~----~~~~~~~~~ 421 (504)
.... ...+..+|++|+|+|+++....+. .+++..+... ++| +|+|+||+|+...... ..++.++++
T Consensus 373 ~~~m--i~gas~AD~aILVVDAtdGv~~QT-rEhL~ll~~l------gIP~IIVVINKiDLv~d~e~le~i~eEi~elLk 443 (1289)
T 3avx_A 373 VKNM--ITGAAQMDGAILVVAATDGPMPQT-REHILLGRQV------GVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 443 (1289)
T ss_dssp HHHH--HHTSCCCSEEEEEEETTTCSCTTH-HHHHHHHHHH------TCSCEEEEEECCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHhhCCEEEEEEcCCccCcHHH-HHHHHHHHHc------CCCeEEEEEeecccccchhhHHHHHHHHHHHHH
Confidence 5444 457899999999999998754443 4455555543 688 7999999999863322 236677888
Q ss_pred HhCC----CCeEEEeccc-c--------CHHHHHHHHHHHHh
Q 010673 422 ELGI----EPPIPVSMKS-K--------DLNNVFSRIIWAAE 450 (504)
Q Consensus 422 ~~~~----~~~~~vSak~-~--------gi~el~~~l~~~~~ 450 (504)
.+++ .+++++||++ . |+.++++.|.+.+.
T Consensus 444 ~~G~~~~~vp~IpvSAktG~ng~~~w~eGI~eLleaL~~~Ip 485 (1289)
T 3avx_A 444 QYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIP 485 (1289)
T ss_dssp HTTSCTTTCCEEECCSTTTTTCCHHHHHHHHHHHHHHHHTSC
T ss_pred hccccccceeEEEEEeccCCCCCccccccchhhHhHHhhhcC
Confidence 8774 2589999998 4 48888888887654
No 237
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=99.48 E-value=4.2e-13 Score=136.80 Aligned_cols=165 Identities=22% Similarity=0.159 Sum_probs=111.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCC-CCCCccceEEEEEEEcCCCcEEEEEEecCChhh----Hhhhh-hhhhhc
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSEN-YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEG----VKKIL-SNKEAL 356 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~-~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~----~~~~~-~~~~~~ 356 (504)
....|+++|++|||||||+++|++...... +..|+.. .....+.++ +...+.++|++|... ...+. .....+
T Consensus 156 ~g~~VgLVG~~gAGKSTLL~~Lsg~~~~i~~~~ftTl~-p~~G~V~~~-~~~~~~l~DtpGli~~a~~~~~L~~~fl~~~ 233 (416)
T 1udx_A 156 LIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLS-PNLGVVEVS-EEERFTLADIPGIIEGASEGKGLGLEFLRHI 233 (416)
T ss_dssp CSCSEEEECCGGGCHHHHHHHHCSSCCEECCCTTCSSC-CEEEEEECS-SSCEEEEEECCCCCCCGGGSCCSCHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHcCCccccCcccceec-ceeeEEEec-CcceEEEEeccccccchhhhhhhhHHHHHHH
Confidence 345689999999999999999998754322 2222211 223345665 335567788887521 11111 012345
Q ss_pred ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEEEeccc-
Q 010673 357 ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKS- 435 (504)
Q Consensus 357 ~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~vSak~- 435 (504)
..++.+++|+|++ ..++..+..+..++..... .....|.++|+||+|+... .......+..+..+.+ ++.+||++
T Consensus 234 era~~lL~vvDls-~~~~~~ls~g~~el~~la~-aL~~~P~ILVlNKlDl~~~-~~~~~l~~~l~~~g~~-vi~iSA~~g 309 (416)
T 1udx_A 234 ARTRVLLYVLDAA-DEPLKTLETLRKEVGAYDP-ALLRRPSLVALNKVDLLEE-EAVKALADALAREGLA-VLPVSALTG 309 (416)
T ss_dssp TSSSEEEEEEETT-SCHHHHHHHHHHHHHHHCH-HHHHSCEEEEEECCTTSCH-HHHHHHHHHHHTTTSC-EEECCTTTC
T ss_pred HHHHhhhEEeCCc-cCCHHHHHHHHHHHHHHhH-HhhcCCEEEEEECCChhhH-HHHHHHHHHHHhcCCe-EEEEECCCc
Confidence 6799999999998 6667777777777665410 0125899999999999864 3333444555555665 89999999
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 010673 436 KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 436 ~gi~el~~~l~~~~~~~~ 453 (504)
.|++++++.|.+.+....
T Consensus 310 ~gi~eL~~~i~~~l~~~~ 327 (416)
T 1udx_A 310 AGLPALKEALHALVRSTP 327 (416)
T ss_dssp TTHHHHHHHHHHHHHTSC
T ss_pred cCHHHHHHHHHHHHHhcc
Confidence 999999999999986543
No 238
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.48 E-value=7.1e-15 Score=135.27 Aligned_cols=154 Identities=10% Similarity=0.092 Sum_probs=119.3
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCC-----CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNA-----PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~-----~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
.++.++++|++ |..+|+|+||.|+.+||..+++. +|. ++++++++.+++.++.+ ++|.|++++|+.++
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~d-----~~g~i~~~eF~~~~ 99 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRD-----MSGTMGFNEFKELW 99 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTT-----CSSCEEHHHHHHHH
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhCCC-----CCCeECHHHHHHHH
Confidence 55667888999 99999999999999999999875 475 78999999999999877 46779999999877
Q ss_pred HHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhh
Q 010673 126 ALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLF 203 (504)
Q Consensus 126 ~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~ 203 (504)
... +.++.+|+.||.|++|.|+.++| . .+. .++... .+++.++|+.+ |+||.|+++||..++
T Consensus 100 ~~~------~~~~~~F~~~D~d~~G~I~~~el~~-~l~-------~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~ 163 (198)
T 1juo_A 100 AVL------NGWRQHFISFDTDRSGTVDPQELQK-ALT-------TMGFRLSPQAVNSIAKRY--STNGKITFDDYIACC 163 (198)
T ss_dssp HHH------HHHHHHHHTTCTTCCSEECHHHHHH-HHH-------HTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHH
T ss_pred HHH------HHHHHHHHHhCCCCCCcCCHHHHHH-HHH-------HhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHH
Confidence 642 57999999999999999999988 5 331 122111 26688888888 999999999999887
Q ss_pred ccCCCCCCCCCccccccccccCCcccHH
Q 010673 204 LTAPESPWDEAPYKDAAETTALGNLTLK 231 (504)
Q Consensus 204 ~~~p~~p~~~~~~~~~~~~~~~g~i~~~ 231 (504)
.....+. ........+..|.|+..
T Consensus 164 ~~~~~~~----~~F~~~D~d~~G~is~~ 187 (198)
T 1juo_A 164 VKLRALT----DSFRRRDTAQQGVVNFP 187 (198)
T ss_dssp HHHHHHH----HHHHHTCTTCCSEEEEE
T ss_pred HHHHHHH----HHHHHhCCCCCCeEeec
Confidence 6542211 11122345567888863
No 239
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.48 E-value=5.6e-15 Score=135.85 Aligned_cols=149 Identities=12% Similarity=0.060 Sum_probs=112.4
Q ss_pred chHHHHHHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCCH-HHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 51 LKPRCVRALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQP-AEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~-~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
.|.-..++++++|..||.| +||.|+.+||..+++ .+|.+++. +++..++..++.+ ++|.|++++|+.++...
T Consensus 8 ~t~~~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~f~~~D~d-----~~G~I~~~Ef~~~~~~~ 81 (198)
T 2r2i_A 8 VEELSATECHQWYKKFMTECPSGQLTLYEFKQFFG-LKNLSPSANKYVEQMFETFDFN-----KDGYIDFMEYVAALSLV 81 (198)
T ss_dssp HHHHHTSCHHHHHHHHHHHCTTSEECHHHHHHHHT-CCSCCHHHHHHHHHHHHHHCTT-----CSSCEEHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHH-HhCCCcchHHHHHHHHHHHCCC-----CCCeEcHHHHHHHHHHH
Confidence 3444556789999999998 899999999999876 45776664 5599999999877 56779999999887655
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCcccc-Chh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVEL-ASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l-~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
......+++..+|+.||.|++|.|+.++| . .+..-. ..... ... ..+.+..+|+.+|.|+||.|+++||..++..
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~-~~~~~~-~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 82 LKGKVDQKLRWYFKLYDVDGNGCIDRGELLN-IIKAIR-AINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp SSCCHHHHHHHHHHHHCTTCSSCEEHHHHHH-HHHHTT-GGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred ccCchHHHHHHHHHHhcCCCCCcCcHHHHHH-HHHHHH-hhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 43334467999999999999999999988 5 321100 00000 011 1255889999999999999999999999875
Q ss_pred CC
Q 010673 206 AP 207 (504)
Q Consensus 206 ~p 207 (504)
.|
T Consensus 160 ~~ 161 (198)
T 2r2i_A 160 DE 161 (198)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 240
>1zo1_I IF2, translation initiation factor 2; E. coli, ribosome, initiation of protein synthesis, cryo-eletron microscopy, translation/RNA complex; 13.80A {Escherichia coli}
Probab=99.47 E-value=1.5e-15 Score=157.91 Aligned_cols=156 Identities=15% Similarity=0.177 Sum_probs=102.5
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEE
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVT 362 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~i 362 (504)
+.++|+++|++++|||||+++|.+..+.....+++........+.++ + ..+.+||++|++.+..++ ...+..+|++
T Consensus 3 R~~~V~IvGhvd~GKTTLl~~L~~~~v~~~e~~GIT~~i~~~~v~~~-~-~~i~~iDTPGhe~f~~~~--~~~~~~aD~a 78 (501)
T 1zo1_I 3 RAPVVTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETE-N-GMITFLDTPGHAAFTSMR--ARGAQATDIV 78 (501)
T ss_dssp CCCCEEEEESTTSSSHHHHHHHHHHHHSBTTBCCCCCCSSCCCCCTT-S-SCCCEECCCTTTCCTTSB--CSSSBSCSSE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHcCCCccccCCCeeEeEEEEEEEEC-C-EEEEEEECCCcHHHHHHH--HHHHhhCCEE
Confidence 45789999999999999999999766544332222211112224444 3 456789999998877665 4578899999
Q ss_pred EEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc--cchHHH---HHHHHHhC-CCCeEEEeccc-
Q 010673 363 IFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT--MAVQDS---ARVTQELG-IEPPIPVSMKS- 435 (504)
Q Consensus 363 ilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~--~~~~~~---~~~~~~~~-~~~~~~vSak~- 435 (504)
++|+|+++....+.. +.+..+... ++|+++|+||+|+.... ...... ..++..++ ..+++++||++
T Consensus 79 ILVVda~~g~~~qT~-e~l~~~~~~------~vPiIVviNKiDl~~~~~~~v~~~l~~~~~~~~~~~~~~~~v~vSAktG 151 (501)
T 1zo1_I 79 VLVVAADDGVMPQTI-EAIQHAKAA------QVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAG 151 (501)
T ss_dssp EEEEETTTBSCTTTH-HHHHHHHHT------TCCEEEEEECSSSSTTCCCCTTCCCCCCCCCTTCCSSSCEEEECCTTTC
T ss_pred EEEeecccCccHHHH-HHHHHHHhc------CceEEEEEEeccccccCHHHHHHHHHHhhhhHHHhCCCccEEEEeeeec
Confidence 999999884322222 222333332 78999999999997532 111110 01112222 12489999999
Q ss_pred cCHHHHHHHHHHHH
Q 010673 436 KDLNNVFSRIIWAA 449 (504)
Q Consensus 436 ~gi~el~~~l~~~~ 449 (504)
.|++++++.|...+
T Consensus 152 ~gI~eLle~I~~~~ 165 (501)
T 1zo1_I 152 TGIDELLDAILLQA 165 (501)
T ss_dssp TTCTTHHHHTTTTC
T ss_pred cCcchhhhhhhhhh
Confidence 99999999987643
No 241
>3izq_1 HBS1P, elongation factor 1 alpha-like protein; NO-GO mRNA decay, ribosomal protein,hydrolase; 9.50A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.1e-13 Score=148.47 Aligned_cols=151 Identities=16% Similarity=0.134 Sum_probs=99.7
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCC--------------------------------CCCccceEEEEEEEc
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENY--------------------------------APTTGEQYAVNVVDQ 328 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~--------------------------------~~T~~~~~~~~~v~~ 328 (504)
.+..++|+++|.+|||||||+++|++....... .+++.. .....+..
T Consensus 164 ~k~~lkV~ivG~~n~GKSTLin~Ll~~~~~i~~~~i~~~~~~~~~~g~~~~~~a~~~d~~~~e~~~GiTid-~~~~~~~~ 242 (611)
T 3izq_1 164 ALPHLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVS-ICTSHFST 242 (611)
T ss_dssp CCCCCEEEEECCSSSCHHHHHHHHHSCSSCSCCHHHHHHHHHSSCSSSSCCSSSHHHHHHHHHHHTTTCCS-CSCCEEEC
T ss_pred cCCceEEEEEECCCCCHHHHHHHHHHhcCCccHHHHHHHHhhhhhccccccceeeeeccchhhhhCCeeEe-eeeEEEec
Confidence 456789999999999999999999976432211 111111 11222444
Q ss_pred CCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcc---cH---HHHHHHHHHHHHhccCCCCCCcEEEEEE
Q 010673 329 PGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEY---SW---KRTKELLVEVARLGEDSGYGVPCLLIAS 402 (504)
Q Consensus 329 ~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~---s~---~~~~~~~~~l~~~~~~~~~~~piilV~N 402 (504)
. ...+.+||++|++.+.... ...+..+|++|+|+|+++.. ++ ......+..+... ...|+|+|+|
T Consensus 243 ~--~~~~~iiDTPG~e~f~~~~--~~~~~~aD~~llVVDa~~g~~e~~~~~~~qt~e~l~~~~~l-----gi~~iIVVvN 313 (611)
T 3izq_1 243 H--RANFTIVDAPGHRDFVPNA--IMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSL-----GIHNLIIAMN 313 (611)
T ss_dssp S--SCEEEEEECCSSSCHHHHH--TTTSSCCSEEEEEEECSHHHHHTTCCTTSHHHHHHHHHHTT-----TCCEEEEEEE
T ss_pred C--CceEEEEECCCCcccHHHH--HHHHhhcCceEEEEECCCCcccccchhhhHHHHHHHHHHHc-----CCCeEEEEEe
Confidence 4 3578899999998775554 55789999999999998742 11 1112222222221 2345999999
Q ss_pred CCCCCCCccc-----hHHHHHHHHHhCCC----CeEEEeccc-cCHHHH
Q 010673 403 KDDLKPYTMA-----VQDSARVTQELGIE----PPIPVSMKS-KDLNNV 441 (504)
Q Consensus 403 K~Dl~~~~~~-----~~~~~~~~~~~~~~----~~~~vSak~-~gi~el 441 (504)
|+|+....+. ...+..+...++.. ++++|||++ .|+.++
T Consensus 314 KiDl~~~~~~~~~ei~~~l~~~l~~~g~~~~~~~~i~vSA~tG~gI~el 362 (611)
T 3izq_1 314 KMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYKI 362 (611)
T ss_dssp CTTTTTTCHHHHHHHHHHHHHHHHHHTCCGGGCEEEECCTTTCTTTSSC
T ss_pred cccccchhHHHHHHHHHHHHHHHHhhcccccCccEEeeecccCCCcccc
Confidence 9999863221 22555666666652 489999999 999876
No 242
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.47 E-value=3.7e-15 Score=142.95 Aligned_cols=178 Identities=13% Similarity=0.105 Sum_probs=127.2
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCH------HHHHHHHHHhhhhccCCcCCCCCCHHhH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQP------AEIVGVKRVVQEKQHDGVNDLGLTLSGF 121 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~------~e~~~~~~~~~~~~~~~~~~~~i~~~~F 121 (504)
...+++.+.++|+++|..||+|+||.|+.+||..+++. +|..++. .++..++..++.+ ++|.|++++|
T Consensus 7 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-l~~~~~~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~Ef 80 (263)
T 2f33_A 7 HLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQE-LLQARKKAGLELSPEMKTFVDQYGQR-----DDGKIGIVEL 80 (263)
T ss_dssp HTTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHH-HHHHHHHHTCCCCHHHHHHHHHHTTG-----GGCCBCHHHH
T ss_pred hhhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-HHhhcCCCccchHHHHHHHHHHhCCC-----CCCcCcHHHH
Confidence 35677788889999999999999999999999999775 4666665 8889999999877 4777999999
Q ss_pred HHHHHHH---------HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCC---CCccccChhHH-HHHHHhhhhhc
Q 010673 122 LFLHALF---------IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSP---DQSVELASEAV-EFLRGIFGLYD 187 (504)
Q Consensus 122 l~l~~~~---------~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~---~~~~~l~~~~~-~~l~~lf~~~D 187 (504)
+.++... ......++++.+|+.||.|++|.|+.++| . .+..-. + ..++.... ..+..+|+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~-~l~~~~~~~g--~~~~~~~~~~~~~~~~~~~d 157 (263)
T 2f33_A 81 AHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKN-FLKDLLEKAN--KTVDDTKLAEYTDLMLKLFD 157 (263)
T ss_dssp HHHTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHH-HHHHHHHHHT--SCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHH-HHHHHHhhcC--CCCCHHHHHHHHHHHHHhcC
Confidence 9776321 12344578999999999999999999988 5 321000 0 02233222 34556999999
Q ss_pred CCCCCCCCHHHHhhhhccC---------CCCCCCC-CccccccccccCCcccHHHHH
Q 010673 188 IDNDGAVRPAELEDLFLTA---------PESPWDE-APYKDAAETTALGNLTLKGFV 234 (504)
Q Consensus 188 ~d~dG~l~~~e~~~l~~~~---------p~~p~~~-~~~~~~~~~~~~g~i~~~~~l 234 (504)
.|+||.|+++||..++... +..+... .........+..|.|+...+.
T Consensus 158 ~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~ 214 (263)
T 2f33_A 158 SNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELD 214 (263)
T ss_dssp SSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHH
T ss_pred CCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHH
Confidence 9999999999999988752 1111000 001223345667888877763
No 243
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.47 E-value=2.6e-14 Score=132.21 Aligned_cols=146 Identities=11% Similarity=0.062 Sum_probs=113.0
Q ss_pred HHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 57 RALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 57 ~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
.+++++|..||.| +||.|+.+|+..++..+.....+.+++..+++.++.+ ++|.|++++|+.++.........+
T Consensus 33 ~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d-----~~G~i~~~Ef~~~~~~~~~~~~~~ 107 (207)
T 2d8n_A 33 EELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSN-----LDGTLDFKEYVIALHMTTAGKTNQ 107 (207)
T ss_dssp HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTT-----CCSEEEHHHHHHHHHHHSCSSSST
T ss_pred HHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCC-----CCCeEeHHHHHHHHHHHcCCCHHH
Confidence 3456689999999 7999999999999886533348899999999999877 466699999998877654445567
Q ss_pred hHHHHHHhhcCCCCccccCCCC-CCCCCCC---CC--CccccCh---hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 136 TTWAVLRKFGYGDDLELRDDFL-PVPTKLS---PD--QSVELAS---EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~---~~--~~~~l~~---~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
+++.+|+.||.|++|.|+.++| . .+..- .+ ....++. ...+.+.++|+.+|.|+||.|+++||..++...
T Consensus 108 ~~~~~f~~~D~d~~G~I~~~E~~~-~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 108 KLEWAFSLYDVDGNGTISKNEVLE-IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp THHHHHHHHCTTCSSEECHHHHHH-HHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCeEcHHHHHH-HHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC
Confidence 8999999999999999999988 5 33110 00 0001221 113678999999999999999999999999876
Q ss_pred CC
Q 010673 207 PE 208 (504)
Q Consensus 207 p~ 208 (504)
|.
T Consensus 187 ~~ 188 (207)
T 2d8n_A 187 KE 188 (207)
T ss_dssp HH
T ss_pred hH
Confidence 54
No 244
>1g7s_A Translation initiation factor IF2/EIF5B; translational GTPase; HET: GDP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: b.43.3.1 b.43.3.1 c.20.1.1 c.37.1.8 PDB: 1g7r_A* 1g7t_A*
Probab=99.47 E-value=1.2e-13 Score=147.27 Aligned_cols=154 Identities=16% Similarity=0.168 Sum_probs=101.3
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCC----CCccceEEEEEEE--------cCC------CcEEEEEEecCChh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYA----PTTGEQYAVNVVD--------QPG------GNKKTLILQEIPEE 344 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~----~T~~~~~~~~~v~--------~~~------~~~~~li~d~~g~~ 344 (504)
+.++|+|+|++|+|||||+++|++..+..... ++.+..+. ... ..+ ....+.+||++|++
T Consensus 4 r~~~V~IvGh~d~GKTTLl~~L~~~~v~~~e~ggiT~~ig~~~~--~~~~~~~~~~~~~~~~~v~~~~~~i~liDTPGhe 81 (594)
T 1g7s_A 4 RSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEI--PMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHE 81 (594)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEEE--EHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTTS
T ss_pred CCcEEEEECCCCCcHHHHHHHHhcccCccccCCceecccCeEEE--eechhhhhccccccccccccccCCEEEEECCCcH
Confidence 45789999999999999999999765533221 12222111 110 000 11247899999998
Q ss_pred hHhhhhhhhhhcccccEEEEEEeCCC---cccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc---------
Q 010673 345 GVKKILSNKEALASCDVTIFVYDSSD---EYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA--------- 412 (504)
Q Consensus 345 ~~~~~~~~~~~~~~ad~iilV~D~s~---~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~--------- 412 (504)
.+..+. ...+..+|++|+|+|+++ +.+++.+. .+... ++|+++|+||+|+......
T Consensus 82 ~F~~~~--~r~~~~aD~aILVvDa~~Gv~~qT~e~l~----~l~~~------~vPiIVViNKiDl~~~~~~~~~~~~~e~ 149 (594)
T 1g7s_A 82 AFTTLR--KRGGALADLAILIVDINEGFKPQTQEALN----ILRMY------RTPFVVAANKIDRIHGWRVHEGRPFMET 149 (594)
T ss_dssp CCTTSB--CSSSBSCSEEEEEEETTTCCCHHHHHHHH----HHHHT------TCCEEEEEECGGGSTTCCCCTTCCHHHH
T ss_pred HHHHHH--HHHHhhCCEEEEEEECCCCccHhHHHHHH----HHHHc------CCeEEEEecccccccccccccCCchHHH
Confidence 887665 357789999999999999 45554432 33333 7999999999999642110
Q ss_pred -----h---H----HHHHH---HHHhCC--------------CCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 413 -----V---Q----DSARV---TQELGI--------------EPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 413 -----~---~----~~~~~---~~~~~~--------------~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
. . ...++ ....++ .+++++||++ .|+++|+++|...+.
T Consensus 150 sa~~~~~v~~~~~e~i~ei~~~L~e~gl~~e~~~~l~~~~~~vpvv~vSA~tG~GI~eLl~~I~~~~~ 217 (594)
T 1g7s_A 150 FSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTDFASQVSIIPISAITGEGIPELLTMLMGLAQ 217 (594)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEGGGCSCTTTEEEEEECCTTTCTTHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHhccCcceEEEEeccCCCCchhHHHHHHhhcc
Confidence 0 0 11111 122222 1489999999 999999999998764
No 245
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.47 E-value=5.9e-14 Score=125.25 Aligned_cols=145 Identities=10% Similarity=0.077 Sum_probs=111.4
Q ss_pred HhHhhhcCCCCCccCHHHHHHHHHHHcCC-----CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 61 RIFIICDHDMDGALNDAELNEFQVKCFNA-----PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 61 ~~F~~~D~d~dG~l~~~El~~~~~~~~g~-----~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
++|..+|+|+||.|+.+||..+++. +|. +++++++..+++.++.+ ++|.|++++|+.++... +
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~eF~~~~~~~------~ 72 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRD-----MSGTMGFNEFKELWAVL------N 72 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHH-HTCSTTSCCCCHHHHHHHHHHHCTT-----CCSCBCHHHHHHHHHHH------H
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHh-hcccCCCCCcCHHHHHHHHHHHCCC-----CCCcCCHHHHHHHHHHH------H
Confidence 4699999999999999999999875 476 78999999999999877 47779999999877642 5
Q ss_pred hHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCCCCC
Q 010673 136 TTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDE 213 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p~~~ 213 (504)
.++.+|+.||.|++|.|+.++| . .+. .++... .+.+.++|+.+ |+||.|+++||..++...+.+.
T Consensus 73 ~~~~~F~~~D~d~~G~i~~~el~~-~l~-------~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~--- 139 (167)
T 1gjy_A 73 GWRQHFISFDSDRSGTVDPQELQK-ALT-------TMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKLRALT--- 139 (167)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHH-HHH-------TTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHH-HHH-------HcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHH---
Confidence 7999999999999999999988 5 331 122111 25677888888 8999999999998876542211
Q ss_pred CccccccccccCCcccHH
Q 010673 214 APYKDAAETTALGNLTLK 231 (504)
Q Consensus 214 ~~~~~~~~~~~~g~i~~~ 231 (504)
........+..|.|+..
T Consensus 140 -~~F~~~D~d~~G~i~~~ 156 (167)
T 1gjy_A 140 -DSFRRRDSAQQGMVNFS 156 (167)
T ss_dssp -HHHHHHCTTCCSEEEEE
T ss_pred -HHHHHhCCCCCeeEEee
Confidence 01122345567888864
No 246
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.46 E-value=5.7e-14 Score=125.00 Aligned_cols=151 Identities=9% Similarity=0.070 Sum_probs=113.5
Q ss_pred HhHhhhcCCCCCccCHHHHHHHHHHHcCC-----CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 61 RIFIICDHDMDGALNDAELNEFQVKCFNA-----PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 61 ~~F~~~D~d~dG~l~~~El~~~~~~~~g~-----~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
++|..+|+|+||.|+.+||..+++. +|. +++++++..+++.++.+ ++|.|++++|+.++... +
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~eF~~~~~~~------~ 70 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRD-----HTGKMGFNAFKELWAAL------N 70 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTT-----CSSCBCHHHHHHHHHHH------H
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHH-hccccCCCCCCHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHHH------H
Confidence 4699999999999999999999875 476 78999999999999877 57779999999877642 5
Q ss_pred hHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCCCCC
Q 010673 136 TTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDE 213 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p~~~ 213 (504)
.++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+ |+||.|+++||..++...+.+.
T Consensus 71 ~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~--- 137 (165)
T 1k94_A 71 AWKENFMTVDQDGSGTVEHHELRQ-AI-------GLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKLRALT--- 137 (165)
T ss_dssp HHHHHHHHHCTTCCSBCCHHHHHH-HH-------HHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHhCCCCCceECHHHHHH-HH-------HHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHH---
Confidence 7999999999999999999988 5 33 1122111 26677888888 8999999999998886542111
Q ss_pred CccccccccccCCcccHHHHHHhhhh
Q 010673 214 APYKDAAETTALGNLTLKGFVSKWAL 239 (504)
Q Consensus 214 ~~~~~~~~~~~~g~i~~~~~l~~w~~ 239 (504)
........+..|.|+.. +..|..
T Consensus 138 -~~F~~~D~d~~G~i~~~--~~~~l~ 160 (165)
T 1k94_A 138 -DFFRKRDHLQQGSANFI--YDDFLQ 160 (165)
T ss_dssp -HHHHTTCTTCCSEEEEE--HHHHHH
T ss_pred -HHHHHhCCCCCCeEeee--HHHHHH
Confidence 01122234567888765 444443
No 247
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=99.46 E-value=3.8e-13 Score=133.03 Aligned_cols=164 Identities=16% Similarity=0.092 Sum_probs=95.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCC-CCcc-c---eEEE--------------------------------
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYA-PTTG-E---QYAV-------------------------------- 323 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~-~T~~-~---~~~~-------------------------------- 323 (504)
....++|+|+|.+|||||||+|+|++..+..... .++. . ....
T Consensus 21 ~~~~~~I~vvG~~~~GKSTlln~l~g~~~lp~~~~~~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (315)
T 1jwy_B 21 PLDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQTQEWGEFLHKPNDMFYDFSEIRE 100 (315)
T ss_dssp TTCCCEEEEEECSSSSHHHHHHHHHTSCCCCC--------CEEEEEEECCCCTTSCCCCCEEEESSSTTCCBCCTHHHHH
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHCCCcCCCCCCceeeeeEEEEEEeCCCcccccchhhhhhhhcccccccCCHHHHHH
Confidence 3567899999999999999999999988732211 1110 0 0000
Q ss_pred ----------------------EEEEcCCCcEEEEEEecCChhhH-----------hhhhhhhhhcccccEEEEEEeCCC
Q 010673 324 ----------------------NVVDQPGGNKKTLILQEIPEEGV-----------KKILSNKEALASCDVTIFVYDSSD 370 (504)
Q Consensus 324 ----------------------~~v~~~~~~~~~li~d~~g~~~~-----------~~~~~~~~~~~~ad~iilV~D~s~ 370 (504)
..+..+ +...+.+||++|.... .....+..++..+|++++|+|.++
T Consensus 101 ~i~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~lvDTpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iilvvd~~~ 179 (315)
T 1jwy_B 101 EIIRDTDRMTGKNKGISAQPINLKIYSP-HVVNLTLVDLPGITKVPVGDQPTDIEQQIRRMVMAYIKKQNAIIVAVTPAN 179 (315)
T ss_dssp HHHHHCC--------CCCCCEEEEEEET-TSCSEEEEECCCCC---------CSHHHHHHHHHHHHHSTTEEEEEEEESS
T ss_pred HHHHHHHHhcCCCCCccCccEEEEEecC-CCCCcEEEECCCCccCCCCCCchhHHHHHHHHHHHHHcCCCeEEEEEEecC
Confidence 001111 2245778999996420 011123568899999999999754
Q ss_pred cc-cHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHHHHHHhCCCCeEEEeccc-------cCHHHH
Q 010673 371 EY-SWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSARVTQELGIEPPIPVSMKS-------KDLNNV 441 (504)
Q Consensus 371 ~~-s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~~~~~~~~~~~~~vSak~-------~gi~el 441 (504)
.. .......++..+. ..+.|+++|+||+|+...... .+..+.....++. .++++|+.+ .|+.++
T Consensus 180 ~~~~~~~~~~i~~~~~------~~~~~~i~v~NK~Dl~~~~~~~~~~~~~~~~~~~~-~~~~v~~~sa~~~~~~~gv~~l 252 (315)
T 1jwy_B 180 TDLANSDALQLAKEVD------PEGKRTIGVITKLDLMDKGTDAMEVLTGRVIPLTL-GFIGVINRSQEDIIAKKSIRES 252 (315)
T ss_dssp SCSTTCSHHHHHHHHC------SSCSSEEEEEECTTSSCSSCCCHHHHTTSSSCCTT-CEEECCCCCHHHHSSSCCHHHH
T ss_pred cchhhhHHHHHHHHhC------CCCCcEEEEEcCcccCCcchHHHHHHhCCCccCCC-CeEEEecCChhhhccCCCHHHH
Confidence 32 1111123333333 237899999999999865542 2222210001112 367777665 368899
Q ss_pred HHHHHHHHhCC
Q 010673 442 FSRIIWAAEHP 452 (504)
Q Consensus 442 ~~~l~~~~~~~ 452 (504)
++.+.+.+...
T Consensus 253 ~~~~~~~~~~~ 263 (315)
T 1jwy_B 253 LKSEILYFKNH 263 (315)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhCC
Confidence 99998887543
No 248
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.46 E-value=5.8e-14 Score=126.55 Aligned_cols=144 Identities=14% Similarity=0.037 Sum_probs=107.1
Q ss_pred hcCCCCCccCHHHHHHHHHHHc-----CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHH
Q 010673 66 CDHDMDGALNDAELNEFQVKCF-----NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAV 140 (504)
Q Consensus 66 ~D~d~dG~l~~~El~~~~~~~~-----g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~ 140 (504)
-++|+||.|+.+||..+++.++ |.++++++++.|++.++.+ ++|.|+|++|+.++... ++++.+
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d-----~~G~I~f~EF~~~~~~~------~~l~~a 81 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELK-----VNGRLDQEEFARLWKRL------VHYQHV 81 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSS-----CSSEECHHHHHHHHHHH------HHHHHH
T ss_pred ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCC-----CCCcCCHHHHHHHHHHH------HHHHHH
Confidence 4789999999999999988652 6789999999999999876 46669999999887643 479999
Q ss_pred HHhhcCCCCccccCCCC-CCCCCCCCCCcccc----ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCCCCCC
Q 010673 141 LRKFGYGDDLELRDDFL-PVPTKLSPDQSVEL----ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEA 214 (504)
Q Consensus 141 ~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l----~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p~~~~ 214 (504)
|+.|| |++|.|+.++| . .+. .+ +... .+++.+|++.+| |+||.|+++||..++...+.+.
T Consensus 82 F~~fD-d~~G~I~~~El~~-~l~-------~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~---- 147 (174)
T 2i7a_A 82 FQKVQ-TSPGVLLSSDLWK-AIE-------NTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMA---- 147 (174)
T ss_dssp HHHHC-SBTTBEEGGGHHH-HHH-------TCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHH----
T ss_pred HHHhc-CCCCcCCHHHHHH-HHH-------HhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHH----
Confidence 99999 99999999999 5 331 22 2222 267889999999 9999999999998887542211
Q ss_pred ccccccccccCC-cccHHHHH
Q 010673 215 PYKDAAETTALG-NLTLKGFV 234 (504)
Q Consensus 215 ~~~~~~~~~~~g-~i~~~~~l 234 (504)
........+..| .++...|+
T Consensus 148 ~~F~~~D~d~~GI~~~~~Ef~ 168 (174)
T 2i7a_A 148 KTFRNLSKDGKGLYLTEMEWM 168 (174)
T ss_dssp HHHHHHCSSSSCCCCCHHHHH
T ss_pred HHHHHhCCCCCCceecHHHHH
Confidence 111223445667 23566664
No 249
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.45 E-value=4.8e-14 Score=135.13 Aligned_cols=138 Identities=14% Similarity=0.166 Sum_probs=107.6
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc---CCCCCHHHHHH----HHHHhhhhccCCcCCCCCCHHhHHHHHHH-
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCF---NAPLQPAEIVG----VKRVVQEKQHDGVNDLGLTLSGFLFLHAL- 127 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~---g~~~~~~e~~~----~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~- 127 (504)
...++++|..||.|+||.|+.+||..++..+. |.+++++++.. ++..++.+ ++|.|++++|+.++..
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~-----~dg~i~~~ef~~~~~~~ 176 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSN-----NDGKLELTEMARLLPVQ 176 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSS-----SSSCBCHHHHHHHSCTT
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCC-----CCCeEcHHHHHHHHHHH
Confidence 34688999999999999999999999987654 99999999988 77777665 4667999999977642
Q ss_pred ------HH-hcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccCh----hHH-HHHHHhhhh-hcCCCCCC
Q 010673 128 ------FI-EKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELAS----EAV-EFLRGIFGL-YDIDNDGA 193 (504)
Q Consensus 128 ------~~-~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~----~~~-~~l~~lf~~-~D~d~dG~ 193 (504)
+. .....+.+..+|+.||.|++|.|+.++| . .+ ..++. ... +++.++++. +|.|+||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~-~l-------~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~ 248 (263)
T 2f33_A 177 ENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDA-LL-------KDLCEKNKQELDINNISTYKKNIMALSDGGK 248 (263)
T ss_dssp TCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHH-HH-------HHHHHHCTTTCCTTTHHHHHHHHHTTSBTTE
T ss_pred HHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHH-HH-------HHHHHhcCCCCCHHHHHHHHHHhhccCCCCe
Confidence 21 2344578999999999999999999988 5 32 11111 111 456677776 79999999
Q ss_pred CCHHHHhhhhccC
Q 010673 194 VRPAELEDLFLTA 206 (504)
Q Consensus 194 l~~~e~~~l~~~~ 206 (504)
|+++||..++...
T Consensus 249 i~~~EF~~~~~~~ 261 (263)
T 2f33_A 249 LYRTDLALILSAG 261 (263)
T ss_dssp ECGGGTHHHHCCS
T ss_pred EcHHHHHHHHhcc
Confidence 9999999988754
No 250
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=99.45 E-value=4.3e-13 Score=145.48 Aligned_cols=133 Identities=14% Similarity=0.146 Sum_probs=88.1
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCC----------------ccceEEEEEEEcCCCcEEEEEEecCChh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPT----------------TGEQYAVNVVDQPGGNKKTLILQEIPEE 344 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T----------------~~~~~~~~~v~~~~~~~~~li~d~~g~~ 344 (504)
.....+|+|+|++|+|||||+++|++........++ .+.++......+..+.....+||++|+.
T Consensus 6 ~~~~~~i~IiG~~gaGKTTLl~~L~~~~~~~~~~G~V~~g~~~~d~~~~e~~~giti~~~~~~~~~~~~~~nliDTpG~~ 85 (665)
T 2dy1_A 6 GAMIRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLFRGHRVFLLDAPGYG 85 (665)
T ss_dssp CCCEEEEEEEESTTSSHHHHHHHHHHHTTSSSSCCCGGGTCCSSCCSHHHHHTTSCCSCEEEEEEETTEEEEEEECCCSG
T ss_pred cCCCcEEEEECCCCChHHHHHHHHHHhcCCCCccceecCCcccccCCHHHHhcCCeEEecceEEeeCCEEEEEEeCCCcc
Confidence 345778999999999999999999954332111111 0111211222222234678889999998
Q ss_pred hHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhC
Q 010673 345 GVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELG 424 (504)
Q Consensus 345 ~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~ 424 (504)
.+.... ..+++.+|++++|+|+++...... ..++..+... ++|+++|+||+|+. ....+..++++..++
T Consensus 86 ~f~~~~--~~~l~~ad~~ilVvD~~~g~~~qt-~~~~~~~~~~------~ip~ilv~NKiD~~--~~~~~~~~~l~~~l~ 154 (665)
T 2dy1_A 86 DFVGEI--RGALEAADAALVAVSAEAGVQVGT-ERAWTVAERL------GLPRMVVVTKLDKG--GDYYALLEDLRSTLG 154 (665)
T ss_dssp GGHHHH--HHHHHHCSEEEEEEETTTCSCHHH-HHHHHHHHHT------TCCEEEEEECGGGC--CCHHHHHHHHHHHHC
T ss_pred chHHHH--HHHHhhcCcEEEEEcCCcccchhH-HHHHHHHHHc------cCCEEEEecCCchh--hhHHHHHHHHHHHhC
Confidence 775544 568889999999999988766544 4555555543 79999999999987 333335555555444
No 251
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.45 E-value=5.6e-14 Score=134.83 Aligned_cols=150 Identities=9% Similarity=0.112 Sum_probs=114.6
Q ss_pred cchHHHHHHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
.+++++++. +|+.||.+ +||.|+.+|+..++..+++...+..++..+++.+|.+ ++|.|++++|+.++...
T Consensus 87 ~~s~~ei~~---l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d-----~dG~I~~~Ef~~~l~~~ 158 (256)
T 2jul_A 87 KFTKKELQS---LYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDAD-----GNGAIHFEDFVVGLSIL 158 (256)
T ss_dssp TSCHHHHHH---HHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCS-----CCSEECSHHHHHHHHHH
T ss_pred CCCHHHHHH---HHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccC-----CCCcCcHHHHHHHHHHH
Confidence 355665554 55555554 8999999999999998777888999999999999876 46669999999887765
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCC-----CCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhh
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKL-----SPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELED 201 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~-----~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~ 201 (504)
......+++..+|+.||.|++|.|+.++| . .+.. .......+... ..+.+.++|+.+|.|+||.|+++||..
T Consensus 159 ~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~-~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~ 237 (256)
T 2jul_A 159 LRGTVHEKLKWAFNLYDINKDGCITKEEMLA-IMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLE 237 (256)
T ss_dssp HSCCHHHHHHHHHHHTCCSSSSCBCHHHHHH-HHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHH
T ss_pred hccChHHHHHHHHHHhCCCCCCcCcHHHHHH-HHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHH
Confidence 54445578999999999999999999988 5 3210 00000011112 237789999999999999999999999
Q ss_pred hhccCCC
Q 010673 202 LFLTAPE 208 (504)
Q Consensus 202 l~~~~p~ 208 (504)
++...|.
T Consensus 238 ~~~~~~~ 244 (256)
T 2jul_A 238 TCQKDEN 244 (256)
T ss_dssp HHHHCSS
T ss_pred HHHhCHH
Confidence 9887654
No 252
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.45 E-value=1.3e-14 Score=135.07 Aligned_cols=146 Identities=12% Similarity=0.065 Sum_probs=104.9
Q ss_pred HHHHHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCCC-HHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcC
Q 010673 55 CVRALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPLQ-PAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKG 132 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~~-~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~ 132 (504)
..++++++|..||.| +||.|+.+||..++. .+|..++ .+++..+++.++.+ ++|.|++++|+.++.......
T Consensus 17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~-~~~~~~~~~~~~~~~f~~~D~d-----~dG~I~~~Ef~~~~~~~~~~~ 90 (211)
T 2ggz_A 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLG-LQGLNQKANKHIDQVYNTFDTN-----KDGFVDFLEFIAAVNLIMQEK 90 (211)
T ss_dssp -------CCCSHHHHCTTSEEEHHHHHHHTT-CCSCCHHHHHHHHHHHHHHCTT-----CSSEEEHHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHH-HhCCCcchHHHHHHHHHHHcCC-----CCCeEeHHHHHHHHHHhccCc
Confidence 344578999999998 999999999998866 4566554 45699999999876 466699999998876543333
Q ss_pred CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCC
Q 010673 133 RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~ 208 (504)
..+++..+|+.||.|++|.|+.++| . .+..-.... ...... .+.+..+|+.+|.|+||.|+++||..++...|.
T Consensus 91 ~~~~l~~~F~~~D~d~~G~I~~~E~~~-~l~~~~~~~-~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 166 (211)
T 2ggz_A 91 MEQKLKWYFKLYDADGNGSIDKNELLD-MFMAVQALN-GQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQD 166 (211)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHHHH-HHHHHTTSS-CCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHhcCCCCCcCcHHHHHH-HHHHHHhhc-CCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHH
Confidence 3467999999999999999999988 5 321000000 001111 255889999999999999999999999886544
No 253
>1f60_A Elongation factor EEF1A; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1g7c_A* 1ije_A* 1ijf_A* 2b7b_A* 2b7c_A
Probab=99.44 E-value=1.7e-13 Score=142.32 Aligned_cols=148 Identities=14% Similarity=0.226 Sum_probs=99.3
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcC--CCCC-------------------------------CCCCCccceEEEEEEEc
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLER--PFSE-------------------------------NYAPTTGEQYAVNVVDQ 328 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~--~~~~-------------------------------~~~~T~~~~~~~~~v~~ 328 (504)
...++|+++|.+|+|||||+++|++. .+.. ....|+...+ ..+..
T Consensus 5 ~~~~~i~iiG~~~~GKSTLi~~Ll~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~d~~~~er~~GiTi~~~~--~~~~~ 82 (458)
T 1f60_A 5 KSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIAL--WKFET 82 (458)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHSCSSHHHHHHHHHHGGGGSSSCCCHHHHHHHHHHHHHTTCCCSCSC--EEEEC
T ss_pred CceeEEEEEcCCCCCHHHHHHHHHHHcCCcChHHHHHhhhhHHhcCCcchhhhhhhccchhHHhcCcEEEEEE--EEEec
Confidence 45689999999999999999999864 1110 0011222222 23444
Q ss_pred CCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcc---cHH---HHHHHHHHHHHhccCCCCCCc-EEEEE
Q 010673 329 PGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEY---SWK---RTKELLVEVARLGEDSGYGVP-CLLIA 401 (504)
Q Consensus 329 ~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~---s~~---~~~~~~~~l~~~~~~~~~~~p-iilV~ 401 (504)
+ ...+.+||++|++.+.... ...+..+|++|+|+|+++.. +|+ ...+++..+... ++| +++|+
T Consensus 83 ~--~~~~~iiDtPGh~~f~~~~--~~~~~~aD~~ilVvda~~g~~~~sf~~~~qt~~~~~~~~~~------~v~~iivvi 152 (458)
T 1f60_A 83 P--KYQVTVIDAPGHRDFIKNM--ITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTL------GVRQLIVAV 152 (458)
T ss_dssp S--SEEEEEEECCCCTTHHHHH--HHSSSCCSEEEEEEECSHHHHHHHTCTTSHHHHHHHHHHHT------TCCEEEEEE
T ss_pred C--CceEEEEECCCcHHHHHHH--HhhhhhCCEEEEEEeCCcCccccccCcchhHHHHHHHHHHc------CCCeEEEEE
Confidence 3 3678899999998775544 45789999999999999763 221 223333333322 565 99999
Q ss_pred ECCCCCCC-cc----chHHHHHHHHHhCC----CCeEEEeccc-cCHHHH
Q 010673 402 SKDDLKPY-TM----AVQDSARVTQELGI----EPPIPVSMKS-KDLNNV 441 (504)
Q Consensus 402 NK~Dl~~~-~~----~~~~~~~~~~~~~~----~~~~~vSak~-~gi~el 441 (504)
||+|+... .. ...++.++++.+++ .+++++||++ .|+.++
T Consensus 153 NK~Dl~~~~~~~~~~i~~~~~~~l~~~g~~~~~~~~i~vSA~~g~nv~~~ 202 (458)
T 1f60_A 153 NKMDSVKWDESRFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEA 202 (458)
T ss_dssp ECGGGGTTCHHHHHHHHHHHHHHHHHHTCCGGGCCEEECCTTTCBTTTBC
T ss_pred EccccccCCHHHHHHHHHHHHHHHHHcCCCccCceEEEeecccCcCcccc
Confidence 99999742 11 12356777788875 3599999999 998754
No 254
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.43 E-value=1.7e-14 Score=139.04 Aligned_cols=146 Identities=16% Similarity=0.220 Sum_probs=108.5
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHc---CCCCCHHHHHH----HHHHhhhhccCCcCCCCCCHHhHHHHHHH--
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCF---NAPLQPAEIVG----VKRVVQEKQHDGVNDLGLTLSGFLFLHAL-- 127 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~---g~~~~~~e~~~----~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~-- 127 (504)
..++++|+.||.|+||.|+.+|+..++.... |.+++++++.. ++..++.+ ++|.|++++|+.++..
T Consensus 104 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~-----~dg~i~~~ef~~~~~~~~ 178 (272)
T 2be4_A 104 VEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKN-----KDGRLDLNDLARILALQE 178 (272)
T ss_dssp HHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSS-----CSSEEEHHHHGGGSCCSS
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccC-----CCCcCcHHHHHHHHhhhH
Confidence 4578999999999999999999999987654 89999999866 77777665 4666999999866431
Q ss_pred ----------HHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCC-CccccChhHH-HHHHHhhhhhcCCCCCCC
Q 010673 128 ----------FIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPD-QSVELASEAV-EFLRGIFGLYDIDNDGAV 194 (504)
Q Consensus 128 ----------~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~-~~~~l~~~~~-~~l~~lf~~~D~d~dG~l 194 (504)
.-.....+.++.+|+.||.|++|.|+.++| . .+..-.. ....++.... ..+.++|+.+|.|+||.|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~i 257 (272)
T 2be4_A 179 NFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDG-FVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKI 257 (272)
T ss_dssp CSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHH-HHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEE
T ss_pred HHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHH-HHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcC
Confidence 001122357999999999999999999988 5 3210000 0002333332 335569999999999999
Q ss_pred CHHHHhhhhccCCC
Q 010673 195 RPAELEDLFLTAPE 208 (504)
Q Consensus 195 ~~~e~~~l~~~~p~ 208 (504)
+++||..++...|.
T Consensus 258 s~~EF~~~~~~~p~ 271 (272)
T 2be4_A 258 QKSELALCLGLKHK 271 (272)
T ss_dssp EHHHHHHHTTCCCC
T ss_pred cHHHHHHHHccCCC
Confidence 99999999988764
No 255
>4fid_A G protein alpha subunit; RAS-like domain, all-helical domain, GTP binding, nucleotide signaling protein, transducer, lipoprotein; HET: MLY MSE GDP; 2.62A {Entamoeba histolytica}
Probab=99.43 E-value=6.6e-13 Score=131.24 Aligned_cols=122 Identities=12% Similarity=0.080 Sum_probs=92.2
Q ss_pred EEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCC----------CcccHHHHHHHHHHHHHhccCCC
Q 010673 323 VNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSS----------DEYSWKRTKELLVEVARLGEDSG 392 (504)
Q Consensus 323 ~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s----------~~~s~~~~~~~~~~l~~~~~~~~ 392 (504)
...+.+. ...+.+||+.|++.++.+| ..++++++++|+|||++ +..++.+...|+..+..... .
T Consensus 153 ~~~~~~~--~v~l~iwDtaGQe~~R~~w--~~yy~~a~~iIfV~diS~ydq~l~e~~~~nr~~es~~~~~~i~~~~~--~ 226 (340)
T 4fid_A 153 EYDFVVK--DIPFHLIDVGGQRSERKXW--VSFFSDVDCAIFVTSLAEYDMKLYEDGNTSRLTESIAVFKDIMTNEF--L 226 (340)
T ss_dssp EEEEESS--SCEEEEEECCSCHHHHHHH--HTTSCSCSEEEEEEEGGGTTCBCC--CCSBHHHHHHHHHHHHHHCGG--G
T ss_pred EEEEEee--eeeeccccCCCcccccccH--HHHhccCCEEEEEEECCccccccccccccchHHHHHHHHHHHhhhhc--c
Confidence 3345554 3678899999999999998 56999999999999998 77889988889888876432 3
Q ss_pred CCCcEEEEEECCCCCCCcc----------------chHHHHH-HHHHh--------------------------CCCCeE
Q 010673 393 YGVPCLLIASKDDLKPYTM----------------AVQDSAR-VTQEL--------------------------GIEPPI 429 (504)
Q Consensus 393 ~~~piilV~NK~Dl~~~~~----------------~~~~~~~-~~~~~--------------------------~~~~~~ 429 (504)
.++|+++++||+|+...+. ..+++.+ +.+++ ++ .++
T Consensus 227 ~~~piiLv~NK~DL~~eki~~~~l~~~fp~y~g~~~~e~a~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i-y~h 305 (340)
T 4fid_A 227 KGAVKLIFLNKMDLFEEKLTKVPLNTIFPEYTGGDNAVMGAQYIQQLFTGKLQTEEMNISGADGTANIEGAVNEKV-YTN 305 (340)
T ss_dssp TTSEEEEEEECHHHHHHHHHHSCGGGTCTTCCCTTCHHHHHHHHHHHHHTTSEEEESCC--------------CEE-EEE
T ss_pred CCCeEEEEEECchhhhhhcCcchHHHhhhhhcCCCCHHHHHHHHHHhcccccchhhhhccccccccccccccCcce-EEE
Confidence 5899999999999854221 1223322 33333 23 368
Q ss_pred EEeccc-cCHHHHHHHHHHHHhC
Q 010673 430 PVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 430 ~vSak~-~gi~el~~~l~~~~~~ 451 (504)
++||++ .||+.+|+.+.+.+..
T Consensus 306 ~TsA~dt~nv~~vF~~v~~~Il~ 328 (340)
T 4fid_A 306 PTNATDGSNIKRVFMLAVDVIMK 328 (340)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCcHHHHHHHHHHHHHHHH
Confidence 999999 9999999999988764
No 256
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.43 E-value=4.5e-14 Score=140.09 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=109.6
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHH-HHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcC
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVG-VKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKG 132 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~-~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~ 132 (504)
.....++.+|..||.|+||+|+.+||..++ +|.+++.+++.. ++..++.+ ++|.|++++|+.++....
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~D~d-----~dG~Is~~EF~~~l~~~~--- 253 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYADED-----ESDDVGFSEYVHLGLCLL--- 253 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHHCTT-----CSSCEEHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHhcCC-----CCCEEeHHHHHHHHHHHH---
Confidence 456789999999999999999999999987 689999999999 99999876 467799999998776544
Q ss_pred CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 133 RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.+..+|+.||.|++|.|+.++| . .+.. .++.... .++..||+.+|.|+||.|+++||..++..
T Consensus 254 ---~l~~~F~~~D~d~dG~Is~~El~~-~l~~------~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 254 ---VLRILYAFADFDKSGQLSKEEVQK-VLED------AHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp ---HHHHHHHHTCSSSCSSEEHHHHHH-HHHH------TTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCCCCCCccHHHHHH-HHHH------HcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 7899999999999999999988 5 2201 1222222 55889999999999999999999988753
No 257
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.42 E-value=5.8e-14 Score=128.17 Aligned_cols=144 Identities=10% Similarity=0.057 Sum_probs=108.9
Q ss_pred HHHHhHhhhcCC-CCCccCHHHHHHHHHHHcCCCC-CHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 58 ALKRIFIICDHD-MDGALNDAELNEFQVKCFNAPL-QPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 58 ~l~~~F~~~D~d-~dG~l~~~El~~~~~~~~g~~~-~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
+++++|..||+| +||.|+.+|+..++..+ +..+ +.+++..++..++.+ ++|.|++++|+.++.........+
T Consensus 26 ~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d-----~~g~i~~~Ef~~~~~~~~~~~~~~ 99 (193)
T 1bjf_A 26 EIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDAN-----GDGTIDFREFIIALSVTSRGKLEQ 99 (193)
T ss_dssp HHHHHHHHHHHHSTTSEEEHHHHHHHHTTT-SSSSCCHHHHHHHHHHHCSS-----CSSEEEHHHHHHHHHHHTSSCHHH
T ss_pred HHHHHHHHHHHHCCCCCcCHHHHHHHHHHh-cCcCChHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHcCCCHHH
Confidence 466789999998 99999999999987754 5444 577889999999876 466699999998776543333346
Q ss_pred hHHHHHHhhcCCCCccccCCCC-CCCCCC---CCCCccccChh---HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCC
Q 010673 136 TTWAVLRKFGYGDDLELRDDFL-PVPTKL---SPDQSVELASE---AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~~l-~~~~~~---~~~~~~~l~~~---~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~ 208 (504)
++..+|+.||.|++|.|+.+++ . .+.. ..+....++.. ..+.+.++|+.+|.|+||.|+++||..++...|.
T Consensus 100 ~~~~~f~~~D~d~~G~I~~~E~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 178 (193)
T 1bjf_A 100 KLKWAFSMYDLDGNGYISKAEMLE-IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPS 178 (193)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHH-HHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTH
T ss_pred HHHHHHhhcCCCCCCeECHHHHHH-HHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHH
Confidence 7999999999999999999888 5 3211 01110123322 2367899999999999999999999999875543
No 258
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=99.42 E-value=1.9e-12 Score=125.15 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=79.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCC--CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhh----hh-hh
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSEN--YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKIL----SN-KE 354 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~--~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~----~~-~~ 354 (504)
...++|+++|.+|||||||+|+|++..+... ..+++...... .+... ...+.+||++|......+. .. ..
T Consensus 37 ~~~~~I~vvG~~g~GKSSLin~l~~~~~~~~~~~~~~t~~~~~~-~~~~~--~~~l~iiDTpG~~~~~~~~~~~~~~i~~ 113 (270)
T 1h65_A 37 VNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMV-SRSRA--GFTLNIIDTPGLIEGGYINDMALNIIKS 113 (270)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSSCCCSSCEEE-EEEET--TEEEEEEECCCSEETTEECHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHhCCCcccccCCCCcceeeEEE-EEeeC--CeEEEEEECCCCCCCccchHHHHHHHHH
Confidence 5579999999999999999999999886432 23344332222 23333 3678899999985432111 00 11
Q ss_pred --hcccccEEEEEEeCCCcccHHH-HHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc
Q 010673 355 --ALASCDVTIFVYDSSDEYSWKR-TKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT 410 (504)
Q Consensus 355 --~~~~ad~iilV~D~s~~~s~~~-~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~ 410 (504)
....+|++++|+|++.. ++.. -..|+..+...... ....|+++|+||+|+....
T Consensus 114 ~~~~~~~d~il~v~~~d~~-~~~~~~~~~~~~l~~~~~~-~~~~~iivV~nK~Dl~~~~ 170 (270)
T 1h65_A 114 FLLDKTIDVLLYVDRLDAY-RVDNLDKLVAKAITDSFGK-GIWNKAIVALTHAQFSPPD 170 (270)
T ss_dssp HTTTCEECEEEEEEESSCC-CCCHHHHHHHHHHHHHHCG-GGGGGEEEEEECCSCCCGG
T ss_pred HhhcCCCCEEEEEEeCCCC-cCCHHHHHHHHHHHHHhCc-ccccCEEEEEECcccCCcC
Confidence 23479999999998653 3332 24666666543110 0126999999999997644
No 259
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=99.41 E-value=3.6e-13 Score=135.85 Aligned_cols=145 Identities=14% Similarity=0.162 Sum_probs=101.6
Q ss_pred EEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEE
Q 010673 286 RCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFV 365 (504)
Q Consensus 286 kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV 365 (504)
+|+++|.+++|||||+++|+. ...|+.. ....+..+ ...+.+||++|++.+.... ...++.+|++|+|
T Consensus 23 ~i~iiG~~d~GKSTL~~~L~~------~giTi~~--~~~~~~~~--~~~i~iiDtPGh~~f~~~~--~~~~~~aD~ailV 90 (370)
T 2elf_A 23 NVAIIGTEKSGRTSLAANLGK------KGTSSDI--TMYNNDKE--GRNMVFVDAHSYPKTLKSL--ITALNISDIAVLC 90 (370)
T ss_dssp EEEEEESTTSSHHHHHHTTSE------EEEESSS--EEEEECSS--SSEEEEEECTTTTTCHHHH--HHHHHTCSEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHh------CCEEEEe--eEEEEecC--CeEEEEEECCChHHHHHHH--HHHHHHCCEEEEE
Confidence 899999999999999999981 1123332 22234544 3568899999997764333 4467899999999
Q ss_pred EeCCCcccHHHHHHHHHHHHHhccCCCCCCcE-EEEEE-CCCCCCCccch---HHHHHHHHHhCC--CCeEE--Eeccc-
Q 010673 366 YDSSDEYSWKRTKELLVEVARLGEDSGYGVPC-LLIAS-KDDLKPYTMAV---QDSARVTQELGI--EPPIP--VSMKS- 435 (504)
Q Consensus 366 ~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~pi-ilV~N-K~Dl~~~~~~~---~~~~~~~~~~~~--~~~~~--vSak~- 435 (504)
+| ++ ..+....+++..+... ++|. ++|+| |+|+ ...... ++++++.+.++. .++++ +||++
T Consensus 91 vd-~~-g~~~qt~e~~~~~~~~------~i~~~ivvvNNK~Dl-~~~~~~~~~~~i~~~l~~~~~~~~~ii~~~~SA~~~ 161 (370)
T 2elf_A 91 IP-PQ-GLDAHTGECIIALDLL------GFKHGIIALTRSDST-HMHAIDELKAKLKVITSGTVLQDWECISLNTNKSAK 161 (370)
T ss_dssp EC-TT-CCCHHHHHHHHHHHHT------TCCEEEEEECCGGGS-CHHHHHHHHHHHHHHTTTSTTTTCEEEECCCCTTSS
T ss_pred Ec-CC-CCcHHHHHHHHHHHHc------CCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHHhcCCCceEEEecccccccC
Confidence 99 54 3455556666666544 6777 89999 9999 533222 244555554442 24899 99986
Q ss_pred ---cCHHHHHHHHHHHHhC
Q 010673 436 ---KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 436 ---~gi~el~~~l~~~~~~ 451 (504)
.|++++++.|.+.+..
T Consensus 162 ~~g~gi~~L~~~l~~~~~~ 180 (370)
T 2elf_A 162 NPFEGVDELKARINEVAEK 180 (370)
T ss_dssp STTTTHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhccc
Confidence 6899999999987643
No 260
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=99.40 E-value=1.5e-13 Score=134.95 Aligned_cols=133 Identities=15% Similarity=0.114 Sum_probs=105.5
Q ss_pred HHHHHHhcCCCC-CCCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcc-cHHH
Q 010673 299 ALLNSFLERPFS-ENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEY-SWKR 376 (504)
Q Consensus 299 SLin~l~~~~~~-~~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~-s~~~ 376 (504)
+|+++++.+.|. ..+.||+++.+... +..+ + ...+||+ ++.+..++ ..+++++|++|+|||++++. ++..
T Consensus 32 sl~~~~~~~~f~~~~~~pTiGd~~~~~-~~~~-~--~~~iwD~--qer~~~l~--~~~~~~ad~vilV~D~~~~~~s~~~ 103 (301)
T 1u0l_A 32 ERILCKLRGKFRLQNLKIYVGDRVEYT-PDET-G--SGVIENV--LHRKNLLT--KPHVANVDQVILVVTVKMPETSTYI 103 (301)
T ss_dssp CEEEEEECGGGTTTTCCCCTTCEEEEE-CCCS-S--SEEEEEE--CCCSCEET--TTTEESCCEEEEEECSSTTCCCHHH
T ss_pred cEEEEEEcccccccCCCCCCccEEEEE-EcCC-C--eEEEEEE--ccccceee--ccccccCCEEEEEEeCCCCCCCHHH
Confidence 689999999988 78889999765432 2222 2 5667777 66777776 45899999999999999997 7888
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhC--CCCeEEEeccc-cCHHHHHHHHHH
Q 010673 377 TKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELG--IEPPIPVSMKS-KDLNNVFSRIIW 447 (504)
Q Consensus 377 ~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~--~~~~~~vSak~-~gi~el~~~l~~ 447 (504)
+..|+..+... ++|+++|+||+|+.+.+.. ++.+++++.++ .+ +++|||++ .|++++|..+..
T Consensus 104 l~~~l~~~~~~------~~piilv~NK~DL~~~~~v-~~~~~~~~~~~~~~~-~~~~SAktg~gv~~lf~~l~g 169 (301)
T 1u0l_A 104 IDKFLVLAEKN------ELETVMVINKMDLYDEDDL-RKVRELEEIYSGLYP-IVKTSAKTGMGIEELKEYLKG 169 (301)
T ss_dssp HHHHHHHHHHT------TCEEEEEECCGGGCCHHHH-HHHHHHHHHHTTTSC-EEECCTTTCTTHHHHHHHHSS
T ss_pred HHHHHHHHHHC------CCCEEEEEeHHHcCCchhH-HHHHHHHHHHhhhCc-EEEEECCCCcCHHHHHHHhcC
Confidence 99999887643 7999999999999765432 34667777777 65 99999999 999999988753
No 261
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.40 E-value=5.2e-14 Score=139.65 Aligned_cols=136 Identities=14% Similarity=0.160 Sum_probs=105.9
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..|+++++..|+++|..||.|+||.|+.+||..++.. +|..+++.++..++..++.+ ++|.|+|.+|+.+..
T Consensus 114 ~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~-lg~~~~~~~i~~l~~~~D~d-----~~G~I~f~ef~~l~~-- 185 (323)
T 1ij5_A 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVEND-----TKGRMSYITLVAVAN-- 185 (323)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHC-----CSSTHHHHHHTTSHH--
T ss_pred HhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCC-----CCCcCcHHHHHhhhh--
Confidence 5789999999999999999999999999999999885 69999999999999999887 466799999986542
Q ss_pred HhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHH-hhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRG-IFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~-lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
..+.++.+|+.||.|++|.|+.++| . .+ ... .++ ...+.. +|+.+|.|+||.|+++||..++..
T Consensus 186 ----~~~~l~~~F~~~D~d~dG~Is~~El~~-~l-~g~----~~~---~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 186 ----DLAALVADFRKIDTNSNGTLSRKEFRE-HF-VRL----GFD---KKSVQDALFRYADEDESDDVGFSEYVHLGLC 251 (323)
T ss_dssp ----HHHTSCCCHHHHCTTCCSEECHHHHHH-HH-HHT----TCC---CHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHCCCCCCcCcHHHHHH-HH-cCC----CCC---HHHHHHHHHHHhcCCCCCEEeHHHHHHHHHH
Confidence 1346778899999999999998888 5 22 100 011 144666 677777777777777777666553
No 262
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A 3sfs_W* 3zvo_Y* 3uoq_W*
Probab=99.39 E-value=1.8e-12 Score=136.62 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=76.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCC----------C----------CccceE--EEEEEEcCCCcEEEEEEe
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYA----------P----------TTGEQY--AVNVVDQPGGNKKTLILQ 339 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~----------~----------T~~~~~--~~~~v~~~~~~~~~li~d 339 (504)
.+..+|+|+|.+|+|||||+++|+......... . +.+.++ ....+... ...+.+||
T Consensus 11 ~~~~~I~IiG~~~aGKTTL~~~Ll~~~g~i~~~g~v~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~--~~~i~liD 88 (529)
T 2h5e_A 11 AKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYH--DCLVNLLD 88 (529)
T ss_dssp HTEEEEEEEECTTSSHHHHHHHHHHSCC-------------------------------CCTTEEEEEET--TEEEEEEC
T ss_pred cCCCEEEEECCCCChHHHHHHHHHhhcCCccccceeecCccccceeeccchhcccCCcceeeeEEEEEEC--CeEEEEEE
Confidence 346899999999999999999999642111000 0 111111 11123333 36778899
Q ss_pred cCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 340 EIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 340 ~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
++|+..+.... ..++..+|++|+|+|+++...... ..++..+. ..++|+++|+||+|+...
T Consensus 89 TPG~~df~~~~--~~~l~~aD~~IlVvDa~~g~~~~t-~~~~~~~~------~~~ipiivviNK~Dl~~~ 149 (529)
T 2h5e_A 89 TPGHEDFSEDT--YRTLTAVDCCLMVIDAAKGVEDRT-RKLMEVTR------LRDTPILTFMNKLDRDIR 149 (529)
T ss_dssp CCCSTTCCHHH--HHGGGGCSEEEEEEETTTCSCHHH-HHHHHHHT------TTTCCEEEEEECTTSCCS
T ss_pred CCCChhHHHHH--HHHHHHCCEEEEEEeCCccchHHH-HHHHHHHH------HcCCCEEEEEcCcCCccc
Confidence 99997765443 457899999999999998754333 33344333 237999999999999764
No 263
>1r5b_A Eukaryotic peptide chain release factor GTP-bindi subunit; translation termination, peptide release, GTPase, translatio; 2.35A {Schizosaccharomyces pombe} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1r5n_A* 1r5o_A* 3e20_A
Probab=99.39 E-value=2.6e-13 Score=141.29 Aligned_cols=150 Identities=16% Similarity=0.238 Sum_probs=90.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCC--CCC------------------------C-------CCCCccceEEEEEEE
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERP--FSE------------------------N-------YAPTTGEQYAVNVVD 327 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~--~~~------------------------~-------~~~T~~~~~~~~~v~ 327 (504)
.+..++|+++|.+++|||||+++|+... +.. . ...|+.. ....+.
T Consensus 40 ~k~~~~i~iiG~vd~GKSTLi~~Ll~~~g~~~~~~~~~~~~~~~~~G~~~~~~~~~~D~~~~er~~giTi~~--~~~~~~ 117 (467)
T 1r5b_A 40 GKEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEV--GRAYFE 117 (467)
T ss_dssp CCEEEEEEEEECGGGTHHHHHHHHHHHTTSSCHHHHHHHHHHTCC------------------------------CCEEE
T ss_pred CCCeeEEEEEECCCCCHHHHHHHHHHHhCCCChHHHHHHHhHHHhcCCcchhhhhhcccchhhhhcCceEEe--eeEEEe
Confidence 3567899999999999999999997421 110 0 0012211 112344
Q ss_pred cCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcc---cHHH---HHHHHHHHHHhccCCCCCCc-EEEE
Q 010673 328 QPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEY---SWKR---TKELLVEVARLGEDSGYGVP-CLLI 400 (504)
Q Consensus 328 ~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~---s~~~---~~~~~~~l~~~~~~~~~~~p-iilV 400 (504)
++ ...+.+||++|++.+.... ...+..+|++|+|+|+++.. +|+. ..+.+..+.. .++| +++|
T Consensus 118 ~~--~~~~~iiDtPGh~~f~~~~--~~~~~~aD~~ilVvDa~~g~~e~sf~~~~qt~e~l~~~~~------~~vp~iivv 187 (467)
T 1r5b_A 118 TE--HRRFSLLDAPGHKGYVTNM--INGASQADIGVLVISARRGEFEAGFERGGQTREHAVLART------QGINHLVVV 187 (467)
T ss_dssp CS--SEEEEECCCCC-------------TTSCSEEEEEEECSTTHHHHTTSTTCCHHHHHHHHHH------TTCSSEEEE
T ss_pred cC--CeEEEEEECCCcHHHHHHH--HhhcccCCEEEEEEeCCcCccccccCCCCcHHHHHHHHHH------cCCCEEEEE
Confidence 44 3677889999998775544 45778999999999999862 3321 1222222222 2677 9999
Q ss_pred EECCCCCCCc---c----chHHHHHHHHHh-CCC-----CeEEEeccc-cCHHHHH
Q 010673 401 ASKDDLKPYT---M----AVQDSARVTQEL-GIE-----PPIPVSMKS-KDLNNVF 442 (504)
Q Consensus 401 ~NK~Dl~~~~---~----~~~~~~~~~~~~-~~~-----~~~~vSak~-~gi~el~ 442 (504)
+||+|+.... . ...+..++++.+ ++. +++++||++ .|+.+++
T Consensus 188 iNK~Dl~~~~~~~~~~~~i~~e~~~~l~~~~g~~~~~~~~~i~vSA~~g~~i~~l~ 243 (467)
T 1r5b_A 188 INKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRV 243 (467)
T ss_dssp EECTTSTTCSSCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECBTTTTBTTSSCC
T ss_pred EECccCCCccccHHHHHHHHHHHHHHHHHhcCCCccCCceEEeccccccccccccc
Confidence 9999996421 1 122566777776 543 389999999 9998765
No 264
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.39 E-value=1.7e-13 Score=149.97 Aligned_cols=160 Identities=10% Similarity=0.084 Sum_probs=126.1
Q ss_pred CcchHHH-HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc-------CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHh
Q 010673 49 QTLKPRC-VRALKRIFIICDHDMDGALNDAELNEFQVKCF-------NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSG 120 (504)
Q Consensus 49 ~~l~~~~-~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~-------g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~ 120 (504)
..|++++ +++|+++|..+| |+||.|+.+||..+++.++ |..+++++++.|++.+|.+ ++|.|+|+|
T Consensus 523 ~~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d-----~~G~I~f~E 596 (714)
T 3bow_A 523 IEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDED-----GSGKLGLKE 596 (714)
T ss_dssp CCCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCS-----SCSSBCHHH
T ss_pred CCCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCC-----CCCcCcHHH
Confidence 3588888 999999999999 9999999999999998764 6789999999999999877 467799999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHH
Q 010673 121 FLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAE 198 (504)
Q Consensus 121 Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e 198 (504)
|+.++... +++..+|+.||.|++|.|+.++| . .+ ..++... .+++..||+.+| |+||.|+++|
T Consensus 597 F~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~-~L-------~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~E 661 (714)
T 3bow_A 597 FYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRK-AL-------EEAGFKLPCQLHQVIVARFA-DDELIIDFDN 661 (714)
T ss_dssp HHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHH-HH-------HHTTEECCHHHHHHHHHHHS-CTTCEECHHH
T ss_pred HHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHH-HH-------HHcCCCCCHHHHHHHHHHhC-CCCCeEcHHH
Confidence 99887653 67999999999999999999988 5 33 1222222 267889999999 9999999999
Q ss_pred HhhhhccCCCCCCCCCccccccccccCCcccHHHH
Q 010673 199 LEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGF 233 (504)
Q Consensus 199 ~~~l~~~~p~~p~~~~~~~~~~~~~~~g~i~~~~~ 233 (504)
|..++.....+. ........+..|.|++...
T Consensus 662 F~~~l~~~~~l~----~~F~~~D~d~dG~Is~~el 692 (714)
T 3bow_A 662 FVRCLVRLEILF----KIFKQLDPENTGTIQLDLI 692 (714)
T ss_dssp HHHHHHHHHHHH----HHHSSSCSSCCSEEEEEHH
T ss_pred HHHHHHHHHHHH----HHHHHhCCCCCCcEEHHHH
Confidence 998876432111 0112234556788876543
No 265
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.39 E-value=9.8e-14 Score=129.45 Aligned_cols=148 Identities=18% Similarity=0.214 Sum_probs=110.2
Q ss_pred CcchHHHHHHHHHhHhhhcC-----CC-C--CccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCC-CCHH
Q 010673 49 QTLKPRCVRALKRIFIICDH-----DM-D--GALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLG-LTLS 119 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~-----d~-d--G~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~-i~~~ 119 (504)
..+++++++.+.++|..+|. |+ | |.|+.+||.. +. .+|.+++.++ +++.++.+ ++|. |+|+
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~-~lg~~~~~~~---lf~~~D~d-----~dG~~I~f~ 112 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LP-ELKANPFKER---ICRVFSTS-----PAKDSLSFE 112 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CH-HHHTSTTHHH---HHHHHCCS-----SSCCSEEHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hh-ccCCChHHHH---HHHHhCcC-----CCCCEecHH
Confidence 35778888888899999998 55 6 9999999998 44 5688888765 56666665 5778 9999
Q ss_pred hHHHHHHHHHhcCC-chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCC--CccccChhHH-HHHHHhhhhhcCCCCCCC
Q 010673 120 GFLFLHALFIEKGR-LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPD--QSVELASEAV-EFLRGIFGLYDIDNDGAV 194 (504)
Q Consensus 120 ~Fl~l~~~~~~~~~-~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~--~~~~l~~~~~-~~l~~lf~~~D~d~dG~l 194 (504)
+|+.++..+..... .+.+..+|+.||.|++|.|+.++| . .+..-.. ....++.... ..+.++|+.+|.|+||.|
T Consensus 113 EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~-~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~I 191 (214)
T 2l4h_A 113 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR-LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI 191 (214)
T ss_dssp HHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHH-HHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSB
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHH-HHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcC
Confidence 99988765443322 357999999999999999999988 5 3310000 0012333333 445679999999999999
Q ss_pred CHHHHhhhhccCC
Q 010673 195 RPAELEDLFLTAP 207 (504)
Q Consensus 195 ~~~e~~~l~~~~p 207 (504)
+++||..++...|
T Consensus 192 s~~EF~~~~~~~p 204 (214)
T 2l4h_A 192 NLSEFQHVISRSP 204 (214)
T ss_dssp CSHHHHHHHHTCH
T ss_pred CHHHHHHHHHhCh
Confidence 9999999988655
No 266
>3mca_A HBS1, elongation factor 1 alpha-like protein; protein protein complex, translation regulation; 2.74A {Schizosaccharomyces pombe}
Probab=99.38 E-value=7.2e-14 Score=149.32 Aligned_cols=158 Identities=18% Similarity=0.189 Sum_probs=86.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCC-------------------------------CCCCCccceEEEEEEEcC
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSE-------------------------------NYAPTTGEQYAVNVVDQP 329 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~-------------------------------~~~~T~~~~~~~~~v~~~ 329 (504)
.+..++|+|+|.+|+|||||+++|++..... ...+.+........+..+
T Consensus 174 ~k~~~~I~iiG~~d~GKSTLi~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~D~~~~E~~~GiTid~~~~~~~~~ 253 (592)
T 3mca_A 174 PKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESD 253 (592)
T ss_dssp CCCEEEEEEECCSSSTHHHHHHHHHHHHHCC-------------------------------------------------
T ss_pred CCCccEEEEEcCCCCCHHHHHHHHHHHcCCcchHHHHHHHHhHhhcCCcchhhhhhhccchhhhcCCeeEEeeEEEEEeC
Confidence 4678899999999999999999996421100 001111111222223333
Q ss_pred CCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcc---cH---HHHHHHHHHHHHhccCCCCCCc-EEEEEE
Q 010673 330 GGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEY---SW---KRTKELLVEVARLGEDSGYGVP-CLLIAS 402 (504)
Q Consensus 330 ~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~---s~---~~~~~~~~~l~~~~~~~~~~~p-iilV~N 402 (504)
...+.+||++|++.+.... ...+..+|++|+|+|+++.. .+ ......+..+... ++| +|+|+|
T Consensus 254 --~~~i~iiDTPGh~~f~~~~--~~~~~~aD~alLVVDa~~g~~e~gi~~~~qt~e~l~~~~~l------gip~iIvviN 323 (592)
T 3mca_A 254 --KKIYEIGDAPGHRDFISGM--IAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRAL------GISEIVVSVN 323 (592)
T ss_dssp -------CCEEESSSEEEEEC--CC-------CCSEEEEEECCSSTTSCSCSSHHHHHHHHHHS------SCCCEEEEEE
T ss_pred --CeEEEEEECCChHHHHHHH--HHHHhhCCEEEEEEECCCCccccccccchHHHHHHHHHHHc------CCCeEEEEEe
Confidence 2567789999997764443 45778999999999998642 11 1112223333332 565 999999
Q ss_pred CCCCCCCcc-c-h---HHHHHHH-HHhCCC----CeEEEeccc-cCHH--------------HHHHHHHHH
Q 010673 403 KDDLKPYTM-A-V---QDSARVT-QELGIE----PPIPVSMKS-KDLN--------------NVFSRIIWA 448 (504)
Q Consensus 403 K~Dl~~~~~-~-~---~~~~~~~-~~~~~~----~~~~vSak~-~gi~--------------el~~~l~~~ 448 (504)
|+|+..... . . .++..+. +.+++. +++++||++ .||. +|++.|.+.
T Consensus 324 KiDl~~~~~~~~~~i~~el~~~l~~~~g~~~~~~~ii~iSA~~G~gI~e~~~~~~~~w~~g~~Lle~l~~~ 394 (592)
T 3mca_A 324 KLDLMSWSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYKGPTLLSALDQL 394 (592)
T ss_dssp CGGGGTTCHHHHHHHHHHHHHHHTTTSCCCGGGEEEEEECSSSCSSSCSCCCCGGGGTCCSCCHHHHHHTS
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhhCCCccceEEEEEecccCcccccccccccccccchHHHHHHHHhh
Confidence 999976221 1 1 2344444 444653 489999999 9998 677777653
No 267
>1wxq_A GTP-binding protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii} SCOP: c.37.1.8 d.15.10.2
Probab=99.36 E-value=9.4e-13 Score=133.88 Aligned_cols=86 Identities=17% Similarity=0.112 Sum_probs=47.0
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCC-CCCCCcc-ceEEEEEEE-------------------cCCC--cEEEEEEecC
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSE-NYAPTTG-EQYAVNVVD-------------------QPGG--NKKTLILQEI 341 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~-~~~~T~~-~~~~~~~v~-------------------~~~~--~~~~li~d~~ 341 (504)
++|+|+|.||||||||+|+|++..... .++.|+. .......+. +. + ...+.+||++
T Consensus 1 ~kI~ivG~pnvGKSTL~n~L~~~~~~~~~~p~tT~~~~~g~~~~~~~~~~~~l~~~~~p~~~~~~~-~~~~~~i~lvDtp 79 (397)
T 1wxq_A 1 MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQNYEYRN-GLALIPVKMVDVA 79 (397)
T ss_dssp CEEEEEECTTSSHHHHHHHHHC--------------CCEEEEEEEEECSCSSSCCSCCCSSSCEET-TEEEEEEEEEECC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCcccCCCCcccCCceEEEeeccCCchHHhhhhcccccccccC-CcceEEEEEEECC
Confidence 489999999999999999999987322 2222332 222221111 12 2 2456789999
Q ss_pred Chhh----Hhhhhh-hhhhcccccEEEEEEeCCCc
Q 010673 342 PEEG----VKKILS-NKEALASCDVTIFVYDSSDE 371 (504)
Q Consensus 342 g~~~----~~~~~~-~~~~~~~ad~iilV~D~s~~ 371 (504)
|... ..++.. ...+++.+|++++|+|+++.
T Consensus 80 G~~~~a~~~~~l~~~~l~~i~~aD~il~VvD~~~~ 114 (397)
T 1wxq_A 80 GLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGK 114 (397)
T ss_dssp ---------------CCCSSTTCSEEEEEEETTCC
T ss_pred CcccchhhhhhHHHHHHHHHhcCCEEEEEEecccc
Confidence 8743 122221 13467999999999999885
No 268
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=99.36 E-value=6.4e-13 Score=133.98 Aligned_cols=156 Identities=13% Similarity=0.115 Sum_probs=97.7
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCcc-ceEEEE------------------------------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTG-EQYAVN------------------------------------ 324 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~-~~~~~~------------------------------------ 324 (504)
...++|+|+|++|||||||+|+|++..+.....++.. ......
T Consensus 32 ~~lp~I~vvG~~~sGKSSLln~l~g~~~lp~~~~~vT~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~ 111 (360)
T 3t34_A 32 DSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDET 111 (360)
T ss_dssp CCCCEEEEECBTTSSHHHHHHHHHTSCCSCCCSSSCCCSCEEEEEEECSSCSCCEEEETTSTTCCBSCHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCCcHHHHHHHHhCCCcCCCCCCcccCcceEEEEecCCCcccceeeeecCCCcccCCHHHHHHHHHHHH
Confidence 3556999999999999999999999887433322111 000000
Q ss_pred -----------------EEEcCCCcEEEEEEecCChhhH-------------hhhhhhhhhcccccEEEEEEeCCCcccH
Q 010673 325 -----------------VVDQPGGNKKTLILQEIPEEGV-------------KKILSNKEALASCDVTIFVYDSSDEYSW 374 (504)
Q Consensus 325 -----------------~v~~~~~~~~~li~d~~g~~~~-------------~~~~~~~~~~~~ad~iilV~D~s~~~s~ 374 (504)
.+..+ ....+.+||++|.... ..+ +..++.++|++|+|+|.++....
T Consensus 112 ~~~~g~~~~~s~~~i~l~i~~~-~~~~l~lvDtPG~~~~~~~~q~~~~~~~~~~~--~~~~i~~~d~iilvv~~~~~~~~ 188 (360)
T 3t34_A 112 DRETGRSKAISSVPIHLSIYSP-NVVNLTLIDLPGLTKVAVDGQSDSIVKDIENM--VRSYIEKPNCIILAISPANQDLA 188 (360)
T ss_dssp HHTSCTTCCCCCSCEEEEEEET-TSCSEEEEECCCBCSSCCTTCCSSHHHHHHHH--HHHHHHSSSEEEEEEEETTSCGG
T ss_pred HHhcCCCCCcccceEEEEEeCC-CCCCeEEEECCCCCcCCcCCCchhHHHHHHHH--HHHHhhcCCeEEEEeecccCCcC
Confidence 01111 1234668899986443 222 35688999999999997654332
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccch-HHHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHH
Q 010673 375 KRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAV-QDSARVTQELGIEPPIPVSMKS-KDLNNVFSRII 446 (504)
Q Consensus 375 ~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~-~~~~~~~~~~~~~~~~~vSak~-~gi~el~~~l~ 446 (504)
. ..|+..+.... ..+.|+++|+||+|+....... ...+.++..++.+ ++++|+++ .++++.+..+.
T Consensus 189 ~--~~~~~l~~~~~---~~~~~~i~V~nK~Dl~~~~~~~~~~~~~~~~~~~~~-~~~v~~~s~~~i~~~~~~~~ 256 (360)
T 3t34_A 189 T--SDAIKISREVD---PSGDRTFGVLTKIDLMDKGTDAVEILEGRSFKLKYP-WVGVVNRSQADINKNVDMIA 256 (360)
T ss_dssp G--CHHHHHHHHSC---TTCTTEEEEEECGGGCCTTCCSHHHHTTSSSCCSSC-CEEECCCCHHHHHTTCCHHH
T ss_pred C--HHHHHHHHHhc---ccCCCEEEEEeCCccCCCcccHHHHHcCccccccCC-eEEEEECChHHhccCCCHHH
Confidence 1 23333333321 2378999999999998654432 2344444445555 89999999 88887655433
No 269
>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 PDB: 1elo_A 1ktv_A 2om7_L* 2wri_Y* 2wrk_Y* 2xsy_Y* 2xuy_Y* 2j7k_A* 2efg_A* 1jqm_B 1efg_A* 1fnm_A* 1pn6_A 2bm1_A* 2bm0_A* 2bv3_A* 3izp_E 1zn0_B 1jqs_C 2bcw_C ...
Probab=99.36 E-value=3.3e-12 Score=139.02 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=80.7
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCC--CC------C------------CCCCCccceEEEEEEEcCCCcEEEEEEec
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERP--FS------E------------NYAPTTGEQYAVNVVDQPGGNKKTLILQE 340 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~--~~------~------------~~~~T~~~~~~~~~v~~~~~~~~~li~d~ 340 (504)
..+..+|+|+|.+|+|||||+++|+... +. . ....|+... ...+... ...+.+||+
T Consensus 9 ~~~~~~I~IvG~~~aGKTTL~~~Ll~~~g~~~~~g~v~~~~~~~d~~~~E~~~giTi~~~--~~~~~~~--~~~i~liDT 84 (691)
T 1dar_A 9 LKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAA--VTTCFWK--DHRINIIDT 84 (691)
T ss_dssp GGGEEEEEEEECTTSCHHHHHHHHHHHHCC----------------------------CC--EEEEEET--TEEEEEECC
T ss_pred cccccEEEEECCCCCCHHHHHHHHHHhcCCCcccceecCCceeccCchhhhhcccccccc--eEEEEEC--CeEEEEEEC
Confidence 3567899999999999999999998421 10 0 011122221 1223333 367788999
Q ss_pred CChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 341 IPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
+|+..+.... ..+++.+|++|+|+|+++..+++....|. .+... ++|+++|+||+|+...
T Consensus 85 PG~~df~~~~--~~~l~~aD~~ilVvDa~~g~~~~t~~~~~-~~~~~------~~p~ivviNKiD~~~~ 144 (691)
T 1dar_A 85 PGHVDFTIEV--ERSMRVLDGAIVVFDSSQGVEPQSETVWR-QAEKY------KVPRIAFANKMDKTGA 144 (691)
T ss_dssp CSSTTCHHHH--HHHHHHCSEEEEEEETTTCSCHHHHHHHH-HHHHT------TCCEEEEEECTTSTTC
T ss_pred cCccchHHHH--HHHHHHCCEEEEEEECCCCcchhhHHHHH-HHHHc------CCCEEEEEECCCcccC
Confidence 9997765554 55788999999999999988887765554 34433 7999999999998753
No 270
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.35 E-value=4.3e-13 Score=150.70 Aligned_cols=140 Identities=11% Similarity=0.120 Sum_probs=118.9
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...++++.+..++++|..||+|+||.|+.+||..++.. +|.++++++++.++..+|.+ ++|.|+|++|+.++..
T Consensus 716 ~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~D~d-----~dG~I~~~EF~~~~~~ 789 (863)
T 1sjj_A 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLIS-MGYNMGEAEFARIMSIVDPN-----RMGVVTFQAFIDFMSR 789 (863)
T ss_dssp CCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHH-HTCCCCTHHHHHHHHHHCTT-----SCSEEETTHHHHTHHH
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHH
Confidence 35677888999999999999999999999999999774 59999999999999999876 4667999999988766
Q ss_pred HHh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCC-----CCCCCCHHHHh
Q 010673 128 FIE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDID-----NDGAVRPAELE 200 (504)
Q Consensus 128 ~~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d-----~dG~l~~~e~~ 200 (504)
... ....+.+..+|+.| .|++|+|+.++| . . ++ .+++..||+.+|.+ +||.|+++||.
T Consensus 790 ~~~~~~~~~~l~~aF~~~-~d~~G~Is~~El~~-~----------l~---~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~ 854 (863)
T 1sjj_A 790 ETADTDTADQVMASFKIL-AGDKNYITVDELRR-E----------LP---PDQAEYCIARMAPYNGRDAVPGALDYMSFS 854 (863)
T ss_dssp HSTTCSSSHHHHHHHHGG-GTSSSEEEHHHHHH-H----------SC---HHHHHHHHHHSEECCSSCCCTTEEESHHHH
T ss_pred HhcCCCCHHHHHHHHHHH-hCCCCcCcHHHHHH-H----------CC---HHHHHHHHHHcchhcCCCCCCCceeHHHHH
Confidence 543 23457899999999 899999999988 6 2 22 35678899999987 79999999999
Q ss_pred hhhccCCC
Q 010673 201 DLFLTAPE 208 (504)
Q Consensus 201 ~l~~~~p~ 208 (504)
.++...|.
T Consensus 855 ~~~~~~~~ 862 (863)
T 1sjj_A 855 TALYGESD 862 (863)
T ss_dssp HHHSCCSC
T ss_pred HHHhcCCC
Confidence 99987664
No 271
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=99.35 E-value=6.2e-12 Score=120.98 Aligned_cols=124 Identities=14% Similarity=0.101 Sum_probs=79.6
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCC--CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhh-h----h
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSE--NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSN-K----E 354 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~--~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~-~----~ 354 (504)
...++|+++|.+|||||||+|+|++..+.. .+.+++.. .....+..+ + ..+.+||++|...+...... . .
T Consensus 34 ~~~~~I~lvG~~g~GKSSLin~l~~~~~~~~~~~~~~t~~-~~~~~~~~~-~-~~l~liDTpG~~~~~~~~~~~~~~i~~ 110 (262)
T 3def_A 34 MNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLR-PVMVSRTMG-G-FTINIIDTPGLVEAGYVNHQALELIKG 110 (262)
T ss_dssp CCEEEEEEEECTTSSHHHHHHHHHTSCCSCCCSSCC-CCC-CEEEEEEET-T-EEEEEEECCCSEETTEECHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhCCCCcccCCCCCccee-eEEEEEEEC-C-eeEEEEECCCCCCcccchHHHHHHHHH
Confidence 467999999999999999999999988633 23333333 223334454 3 57889999998554322110 0 1
Q ss_pred h--cccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 355 A--LASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 355 ~--~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
+ ...+|++++|+|++.......-..|+..+...... ....|+++|+||+|+...
T Consensus 111 ~l~~~~~~~il~V~~~d~~~~~~~~~~~~~~l~~~~~~-~~~~~~ivv~nK~Dl~~~ 166 (262)
T 3def_A 111 FLVNRTIDVLLYVDRLDVYAVDELDKQVVIAITQTFGK-EIWCKTLLVLTHAQFSPP 166 (262)
T ss_dssp HTTTCEECEEEEEEESSCSCCCHHHHHHHHHHHHHHCG-GGGGGEEEEEECTTCCCS
T ss_pred HHhcCCCCEEEEEEcCCCCCCCHHHHHHHHHHHHHhch-hhhcCEEEEEeCcccCCC
Confidence 1 13789999999987654222224666666654210 112499999999999643
No 272
>4a9a_A Ribosome-interacting GTPase 1; DRG-DFRP complex, ribosome binding GTPase; 2.67A {Saccharomyces cerevisiae}
Probab=99.33 E-value=5.4e-11 Score=119.28 Aligned_cols=120 Identities=16% Similarity=0.109 Sum_probs=75.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCC-CccceEEEEEEEcCCCcEEEEEEecCChhhH----hh-hhhhhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAP-TTGEQYAVNVVDQPGGNKKTLILQEIPEEGV----KK-ILSNKE 354 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~-T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~----~~-~~~~~~ 354 (504)
..+..+|++||.||||||||+|+|++........| ||.+ .....+.++ + ..+.++|++|-..- .+ ..+...
T Consensus 69 k~g~a~V~ivG~PNvGKSTL~n~Lt~~~~~v~~~pftT~~-~~~g~~~~~-~-~~i~l~D~pGl~~~a~~~~~~g~~~l~ 145 (376)
T 4a9a_A 69 RTGVASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLV-TVPGVIRYK-G-AKIQMLDLPGIIDGAKDGRGRGKQVIA 145 (376)
T ss_dssp BCSSEEEEEECCCCHHHHHHHHHHHSBCCCGGGTCSSCCC-EEEEEEEET-T-EEEEEEECGGGCCC-----CHHHHHHH
T ss_pred ecCCCeEEEECCCCCCHHHHHHHHhCCCCcccCCCCceee-eeeEEEEeC-C-cEEEEEeCCCccCCchhhhHHHHHHHH
Confidence 34567999999999999999999999876544434 4444 344556776 3 56778898875211 11 122356
Q ss_pred hcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCC
Q 010673 355 ALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDL 406 (504)
Q Consensus 355 ~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl 406 (504)
.++.||++++|+|+++|.. ....+..++..... .....|.+++.||+|.
T Consensus 146 ~i~~ad~il~vvD~~~p~~--~~~~i~~EL~~~~~-~l~~k~~~i~~nK~d~ 194 (376)
T 4a9a_A 146 VARTCNLLFIILDVNKPLH--HKQIIEKELEGVGI-RLNKTPPDILIKKKEK 194 (376)
T ss_dssp HHHHCSEEEEEEETTSHHH--HHHHHHHHHHHTTE-EETCCCCCEEEEECSS
T ss_pred HHHhcCccccccccCccHH--HHHHHHHHHHHhhH-hhccCChhhhhhHhhh
Confidence 7789999999999998733 22222233322210 0124455566666664
No 273
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.32 E-value=3.3e-12 Score=130.29 Aligned_cols=159 Identities=16% Similarity=0.159 Sum_probs=80.4
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCC-C-------CCCccceEEEEEEEcCCCcEEEEEEecCChhhH-------h
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSEN-Y-------APTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV-------K 347 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~-~-------~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~-------~ 347 (504)
-.++|+|+|++|||||||+|.|++..+... + .+|++.......+...+-.....+||++|.... .
T Consensus 30 vsf~I~lvG~sGaGKSTLln~L~g~~~~~~~~~~~~~~~~~t~~~~~i~~v~q~~~~~~~Ltv~Dt~g~~~~~~~~~~~~ 109 (418)
T 2qag_C 30 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQ 109 (418)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHTTCCCCCCCCCSCC-----CCEEEEEECC------CEEEEEEECC-----------CH
T ss_pred CCEEEEEECCCCCcHHHHHHHHhCCCCCCCCCCCcccCCccceeeeeEEEEEecCCcccceeeeechhhhhhccchhhHH
Confidence 347899999999999999999999876321 1 122222111111122212235567888876432 1
Q ss_pred hhh----------------hhhhhcccccEEEEEEeCCCc-ccHHHHH-HHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 348 KIL----------------SNKEALASCDVTIFVYDSSDE-YSWKRTK-ELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 348 ~~~----------------~~~~~~~~ad~iilV~D~s~~-~s~~~~~-~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
.+. -+...+.++++.+++|+.... .++.... .|+..+. .++|+|+|+||+|+...
T Consensus 110 ~i~~~i~~~~~~~l~qr~~IaRal~~d~~~~vlL~ldePt~~~L~~~d~~~lk~L~-------~~v~iIlVinK~Dll~~ 182 (418)
T 2qag_C 110 PVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLH-------EKVNIIPLIAKADTLTP 182 (418)
T ss_dssp HHHHHHHHHHHHHTTTSCC-CCCCCCCC-CCEEEEECCC-CCSCCHHHHHHHHHHT-------TTSEEEEEEESTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEEecCcccCCCHHHHHHHHHHh-------ccCcEEEEEEcccCccH
Confidence 110 012244555554444444332 3444433 5666553 27999999999999875
Q ss_pred ccch---HHHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHHHHH
Q 010673 410 TMAV---QDSARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAA 449 (504)
Q Consensus 410 ~~~~---~~~~~~~~~~~~~~~~~vSak~-~gi~el~~~l~~~~ 449 (504)
++.. ..+.+++..++++ ++++|+++ .++++++..|.+.+
T Consensus 183 ~ev~~~k~~i~~~~~~~~i~-~~~~sa~~~~~v~~~~~~l~~~i 225 (418)
T 2qag_C 183 EECQQFKKQIMKEIQEHKIK-IYEFPETDDEEENKLVKKIKDRL 225 (418)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-CCCCC-----------------C
T ss_pred HHHHHHHHHHHHHHHHcCCe-EEeCCCCCCcCHHHHHHHHHhhC
Confidence 5543 3677788888887 89999999 99999888887654
No 274
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=99.31 E-value=1.8e-12 Score=127.12 Aligned_cols=161 Identities=14% Similarity=0.138 Sum_probs=82.4
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcC-CCCCCC--------CCCccceEEEEEEEcCCCcEEEEEEecCCh-------hhH
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLER-PFSENY--------APTTGEQYAVNVVDQPGGNKKTLILQEIPE-------EGV 346 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~-~~~~~~--------~~T~~~~~~~~~v~~~~~~~~~li~d~~g~-------~~~ 346 (504)
-.++|+|+|++|||||||+++|.+. .+.... .+|.........++..+....+.+||++|. +.+
T Consensus 17 ~~~~I~lvG~nG~GKSTLl~~L~g~~~~~~~gi~~~g~~~~~t~~~~~~~~~~q~~~~~~~ltv~Dt~g~~~~~~~~e~~ 96 (301)
T 2qnr_A 17 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVISGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCF 96 (301)
T ss_dssp -CEEEEEEEETTSSHHHHHHHHHC------------------------CEEEEC---CCEEEEEEEEC-----------C
T ss_pred CCEEEEEECCCCCCHHHHHHHHhCCCccCCCCcccCCcccCCcceEeeEEEEecCCCcccCcchhhhhhhhhhcCcHHHH
Confidence 4589999999999999999999876 332221 122221111111222322345678888886 322
Q ss_pred hhhhhh-----hhhcc-------------cccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCC
Q 010673 347 KKILSN-----KEALA-------------SCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKP 408 (504)
Q Consensus 347 ~~~~~~-----~~~~~-------------~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~ 408 (504)
..+... ..++. .+++++++.+.+. .+++.+. ...+... ..+.|+++|+||+|+..
T Consensus 97 ~~l~~~l~~~~~~~~~~~sgg~rqrv~~ara~~ll~ldePt~-~~Ld~~~--~~~l~~l----~~~~~iilV~~K~Dl~~ 169 (301)
T 2qnr_A 97 KTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFG-HGLKPLD--VAFMKAI----HNKVNIVPVIAKADTLT 169 (301)
T ss_dssp TTHHHHHHHHHHHHHHHHTSSCCTTCCCCCCCEEEEEECSSS-SSCCHHH--HHHHHHH----TTTSCEEEEECCGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCHHhhhhhhhhhhhheeeeecCcc-cCCCHHH--HHHHHHH----HhcCCEEEEEEeCCCCC
Confidence 222210 01222 2344555555432 2333322 1222222 23689999999999987
Q ss_pred Cccch---HHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHHHHhC
Q 010673 409 YTMAV---QDSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEH 451 (504)
Q Consensus 409 ~~~~~---~~~~~~~~~~~~~~~~~vSak~~gi~el~~~l~~~~~~ 451 (504)
.++.. +.+.++++.++++ ++++||++.|++++|..+.+.+..
T Consensus 170 ~~e~~~~~~~~~~~~~~~~~~-~~e~Sa~~~~v~e~f~~l~~~i~~ 214 (301)
T 2qnr_A 170 LKERERLKKRILDEIEEHNIK-IYHLPDAESDEDEDFKEQTRLLKA 214 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-CCCCC---------CHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCe-EEecCCccccccHHHHHHHHHhhc
Confidence 54432 3678889999986 999999987899999999988754
No 275
>2xex_A Elongation factor G; GTPase, translation, biosynthetic protein; 1.90A {Staphylococcus aureus}
Probab=99.30 E-value=1.1e-11 Score=134.80 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=80.7
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcC--CCCC---CC---------------CCCccceEEEEEEEcCCCcEEEEEEec
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLER--PFSE---NY---------------APTTGEQYAVNVVDQPGGNKKTLILQE 340 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~--~~~~---~~---------------~~T~~~~~~~~~v~~~~~~~~~li~d~ 340 (504)
..+..+|+|+|.+|+|||||+++|+.. .+.. .. ..|+... ...+.+. ...+.+||+
T Consensus 7 ~~~~~~I~IvG~~~aGKSTL~~~Ll~~~~~~~~~g~v~~~~~~~D~~~~e~~~giTi~~~--~~~~~~~--~~~i~liDT 82 (693)
T 2xex_A 7 LEKTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSA--ATTAAWE--GHRVNIIDT 82 (693)
T ss_dssp STTEEEEEEECCGGGTHHHHHHHHHHHHSSCC-------------------------CCS--EEEEEET--TEEEEEECC
T ss_pred cccceEEEEECCCCCCHHHHHHHHHHhcCCccccccccCCceecccchhhhhcCceEeee--eEEEEEC--CeeEEEEEC
Confidence 356789999999999999999999942 2110 00 0111111 1223343 367788999
Q ss_pred CChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 341 IPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
+|+..+.... ..+++.+|++|+|+|+++..+......| ..+... ++|+++|+||+|+...
T Consensus 83 PG~~df~~~~--~~~l~~aD~~llVvDa~~g~~~~~~~~~-~~~~~~------~~p~ilviNK~Dl~~~ 142 (693)
T 2xex_A 83 PGHVDFTVEV--ERSLRVLDGAVTVLDAQSGVEPQTETVW-RQATTY------GVPRIVFVNKMDKLGA 142 (693)
T ss_dssp CCCSSCCHHH--HHHHHHCSEEEEEEETTTBSCHHHHHHH-HHHHHT------TCCEEEEEECTTSTTC
T ss_pred cCCcchHHHH--HHHHHHCCEEEEEECCCCCCcHHHHHHH-HHHHHc------CCCEEEEEECCCcccc
Confidence 9997665443 4578899999999999998888775554 345443 7999999999999764
No 276
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=99.29 E-value=5.9e-13 Score=133.83 Aligned_cols=156 Identities=16% Similarity=0.147 Sum_probs=91.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCC------CCC-----------------------ccc-------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENY------APT-----------------------TGE------------- 319 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~------~~T-----------------------~~~------------- 319 (504)
...++|+|+|.+|||||||+|+|++..+.+.. .|+ +..
T Consensus 29 ~~~~~I~vvG~~~~GKSSLln~L~g~~~~p~~~~~~t~~p~~~~~~~~~~~~~~~~~~~~~~~tt~~~v~~~i~~~~~~i 108 (353)
T 2x2e_A 29 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRV 108 (353)
T ss_dssp CCCCEEEEECBTTSSHHHHHHTTTTSCCSCCCSSSCCCSCEEEEEEECSSCEEEETTSTTCCBCCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHhCCCcCCCCCCcccccceEEEEEcCCccceeeeecCCcccCCHHHHHHHHHHHHHHh
Confidence 45679999999999999999999998875222 122 000
Q ss_pred ----------eEEEEEEEcCCCcEEEEEEecCChh-------------hHhhhhhhhhhccccc-EEEEEEeCCCcccHH
Q 010673 320 ----------QYAVNVVDQPGGNKKTLILQEIPEE-------------GVKKILSNKEALASCD-VTIFVYDSSDEYSWK 375 (504)
Q Consensus 320 ----------~~~~~~v~~~~~~~~~li~d~~g~~-------------~~~~~~~~~~~~~~ad-~iilV~D~s~~~s~~ 375 (504)
.... .+..+ +...+.+||++|.. .+..+. ..++..++ ++++|.|++....-.
T Consensus 109 ~g~~~gi~~~~~~~-~i~~~-~~~~l~lvDTPG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~iiL~v~~a~~~~~~~ 184 (353)
T 2x2e_A 109 TGTNKGISPVPINL-RVYSP-HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML--MQFVTKENCLILAVSPANSDLANS 184 (353)
T ss_dssp HTTTTCCCCCCEEE-EEEET-TCCSEEEEECCCBCSSCCTTCCTTHHHHHHHHH--HHHHTSTTEEEEEEEETTSCGGGC
T ss_pred cccCCCcccCceEE-EEecC-CCCCcEEEECCCCCCCccCCCchhHHHHHHHHH--HHHHcCCCeEEEEEecCCCccchh
Confidence 0000 01111 12457789999852 223332 34555554 555566765532222
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc-hHHHHH--HHHHhCCCCeEEEeccc-cCHHHHHHHHHH
Q 010673 376 RTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA-VQDSAR--VTQELGIEPPIPVSMKS-KDLNNVFSRIIW 447 (504)
Q Consensus 376 ~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~-~~~~~~--~~~~~~~~~~~~vSak~-~gi~el~~~l~~ 447 (504)
....++..+. ..+.|+++|+||+|+...... ....+. +...++..+++++||++ .|++++++.+.+
T Consensus 185 ~~~~i~~~~~------~~~~~~i~V~NK~Dl~~~~~~~~~~~~~~~~~l~~~~~~v~~~SA~~~~~i~~l~~~l~~ 254 (353)
T 2x2e_A 185 DALKVAKEVD------PQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAA 254 (353)
T ss_dssp HHHHHHHHHC------TTCTTEEEEEECGGGSCTTCCCHHHHTTCSSCCTTCEEECCCCCHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHhC------cCCCceEEEeccccccCcchhHHHHHhCCcccccCCceEEEeCCcccccccccHHHHHHH
Confidence 2223444443 237899999999999765432 111110 00011222367899999 999999999987
No 277
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.29 E-value=3.5e-12 Score=103.63 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=66.0
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...|+++++++|+++|+.||+|+||+|+.+||..+++ .+|.+++++|++.|++.+|.+ ++|.|+|++|+.++
T Consensus 27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~-~lg~~~~~~ei~~l~~~~D~d-----~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMR-SLGYMPNEVELEVIIQRLDMD-----GDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHH-HHTCCCCTTTHHHHHHHHCSS-----CSSSBCHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHHCCC-----CCCeEeHHHHHHHh
Confidence 4678999999999999999999999999999999987 469999999999999999887 57779999999875
No 278
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=99.29 E-value=2.1e-12 Score=120.69 Aligned_cols=153 Identities=10% Similarity=0.082 Sum_probs=91.5
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCC------CCCCcc-c-------eEEEEEEEcCC----------------Cc
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSEN------YAPTTG-E-------QYAVNVVDQPG----------------GN 332 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~------~~~T~~-~-------~~~~~~v~~~~----------------~~ 332 (504)
+..+|+|+|.+|||||||+++|++...... ..+... + ......+..++ ..
T Consensus 29 ~~~~i~i~G~~g~GKTTl~~~l~~~~~~~~~~~~i~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (221)
T 2wsm_A 29 GTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLKKFSD 108 (221)
T ss_dssp TCEEEEEEECTTSCHHHHHHHHHHHHTTTSCEEEEECSCCCHHHHHHHHTTTCEEEECCCTTCSSCCHHHHHTTGGGGTT
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHhccCCeEEEEecCCCCchhHHHHHhCCCcEEEecCCceeecccHHHHHHHHhcCC
Confidence 467999999999999999999987522110 011100 0 01111121110 12
Q ss_pred EEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc-c
Q 010673 333 KKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT-M 411 (504)
Q Consensus 333 ~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~-~ 411 (504)
..+++||++|...... .+...++.+++|+|+++.... ...+.. .. +.|+++|+||+|+.... .
T Consensus 109 ~d~iiidt~G~~~~~~-----~~~~~~~~~i~vvd~~~~~~~--~~~~~~---~~------~~~~iiv~NK~Dl~~~~~~ 172 (221)
T 2wsm_A 109 CDLLLIENVGNLICPV-----DFDLGENYRVVMVSVTEGDDV--VEKHPE---IF------RVADLIVINKVALAEAVGA 172 (221)
T ss_dssp CSEEEEEEEEBSSGGG-----GCCCSCSEEEEEEEGGGCTTH--HHHCHH---HH------HTCSEEEEECGGGHHHHTC
T ss_pred CCEEEEeCCCCCCCCc-----hhccccCcEEEEEeCCCcchh--hhhhhh---hh------hcCCEEEEecccCCcchhh
Confidence 3456777777411111 111357889999999876431 111111 11 57899999999986532 2
Q ss_pred chHHHHHHHHHhCC-CCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 412 AVQDSARVTQELGI-EPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 412 ~~~~~~~~~~~~~~-~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
......+.++.++. .+++++||++ .|++++++.|.+.+..
T Consensus 173 ~~~~~~~~~~~~~~~~~i~~~Sa~~g~gi~~l~~~l~~~~~~ 214 (221)
T 2wsm_A 173 DVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLRGILNV 214 (221)
T ss_dssp CHHHHHHHHHHHCTTSEEEECBTTTTBTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhCCCCeEEEeecCCCCCHHHHHHHHHHHHHH
Confidence 23345555555542 2489999999 9999999999988754
No 279
>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} PDB: 3j0e_H
Probab=99.28 E-value=4.9e-11 Score=129.96 Aligned_cols=120 Identities=12% Similarity=0.029 Sum_probs=79.9
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCC--CCCC-----------CCC---CccceE--EEEEEEcC-----CCcEEEEE
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERP--FSEN-----------YAP---TTGEQY--AVNVVDQP-----GGNKKTLI 337 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~--~~~~-----------~~~---T~~~~~--~~~~v~~~-----~~~~~~li 337 (504)
..+..+|+|+|..|+|||||+++|+... +... +.+ ..+.++ ....+.+. +....+.+
T Consensus 7 ~~~~~~I~IiG~~~~GKTTL~~~Ll~~~g~~~~~g~v~~g~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~~~~~~~~i~l 86 (704)
T 2rdo_7 7 IARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINI 86 (704)
T ss_pred cccccEEEEECCCCCCHHHHHHHHHHhcCCcccccccCCCceeecChhhHHhcCceeeeceEEEEECCccccCCceeEEE
Confidence 3556899999999999999999997531 1100 000 011111 11123332 12266778
Q ss_pred EecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 338 LQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 338 ~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
||++|+..+.... ..+++.+|++|+|+|+++....+....| ..+... ++|+++|+||+|+...
T Consensus 87 iDTPG~~df~~~~--~~~l~~aD~aIlVvDa~~gv~~qt~~~~-~~~~~~------~ip~ilviNKiD~~~~ 149 (704)
T 2rdo_7 87 IDTPGHVDFTIEV--ERSMRVLDGAVMVYCAVGGVQPQSETVW-RQANKY------KVPRIAFVNKMDRMGA 149 (704)
T ss_pred EeCCCccchHHHH--HHHHHHCCEEEEEEeCCCCCcHHHHHHH-HHHHHc------CCCEEEEEeCCCcccc
Confidence 9999997765554 4578899999999999988766654444 344333 7999999999998653
No 280
>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ...
Probab=99.26 E-value=1.1e-11 Score=123.86 Aligned_cols=131 Identities=15% Similarity=0.057 Sum_probs=99.4
Q ss_pred CCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCC----------cccHHHHHHHHHH
Q 010673 314 APTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSD----------EYSWKRTKELLVE 383 (504)
Q Consensus 314 ~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~----------~~s~~~~~~~~~~ 383 (504)
.+|++. ....+.++ ...+.+||++|++.++..| ..++++++++|+|||+++ ..++.+...|+..
T Consensus 178 ~~T~Gi--~~~~~~~~--~~~l~iwDt~GQe~~r~~w--~~yf~~a~~iIfV~dls~~d~~l~ed~~~nr~~e~~~~~~~ 251 (353)
T 1cip_A 178 VKTTGI--VETHFTFK--DLHFKMFDVGGQRSERKKW--IHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDS 251 (353)
T ss_dssp CCCCSE--EEEEEEET--TEEEEEEEECCSGGGGGGG--GGGCTTCSEEEEEEEGGGGGCEETTEEEEEHHHHHHHHHHH
T ss_pred Cceece--EEEEEeeC--CeeEEEEeCCCchhhhHHH--HHHHhcCCEEEEEEECccccccccccchhhhHHHHHHHHHH
Confidence 345554 33445554 3678899999999998888 569999999999999999 5678888899988
Q ss_pred HHHhccCCCCCCcEEEEEECCCCCCCc----------------cchHHHHHHHHH-----------hCCCCeEEEeccc-
Q 010673 384 VARLGEDSGYGVPCLLIASKDDLKPYT----------------MAVQDSARVTQE-----------LGIEPPIPVSMKS- 435 (504)
Q Consensus 384 l~~~~~~~~~~~piilV~NK~Dl~~~~----------------~~~~~~~~~~~~-----------~~~~~~~~vSak~- 435 (504)
+..... ..++|+++|+||+|+...+ ...+++.+++.. .++ .+++|||++
T Consensus 252 i~~~~~--~~~~piiLv~NK~DL~~~ki~~~~l~~~fp~~~g~~~~~e~~~~~~~~f~~l~~~~~~~~~-~~~etSA~~~ 328 (353)
T 1cip_A 252 ICNNKW--FTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEI-YTHFTCATDT 328 (353)
T ss_dssp HHTCGG--GTTSEEEEEEECHHHHHHHHTTSCGGGTCTTCCSCSCHHHHHHHHHHHHHTTCSCTTTCCE-EEEECCTTCH
T ss_pred HHcCcc--ccCCcEEEEEECcCchhhhccccchhhcccccCCCCCHHHHHHHHHHHHHHhhcccCCCce-EEEEEECcCc
Confidence 876421 3579999999999985322 223466666652 333 378999999
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 010673 436 KDLNNVFSRIIWAAEHPH 453 (504)
Q Consensus 436 ~gi~el~~~l~~~~~~~~ 453 (504)
.||+++|+++.+.+....
T Consensus 329 ~nV~~vF~~v~~~i~~~~ 346 (353)
T 1cip_A 329 KNVQFVFDAVTDVIIKNN 346 (353)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 999999999999875443
No 281
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.26 E-value=4e-13 Score=143.97 Aligned_cols=132 Identities=11% Similarity=0.058 Sum_probs=57.1
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchh
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLET 136 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~ 136 (504)
..++++|+.||+|+||.|+.+||..+++ .+|.++++++++.+++.+|.+ ++|.|+|++|+.++.... ..++
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~-~lg~~~s~~el~~lf~~~D~d-----~~G~I~f~EF~~~~~~l~---~~~e 81 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLK-ELNIQVDDGYARKIFRECDHS-----QTDSLEDEEIETFYKMLT---QRAE 81 (624)
T ss_dssp ---------------------------------------------------------------CTTHHHHHHT---CCHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCC-----CCCeEeHHHHHHHHHHhc---cHHH
Confidence 4799999999999999999999999987 569999999999999999877 467799999998876542 3478
Q ss_pred HHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChh--HHHHHHHhhhhhcCC----CCCCCCHHHHhhhhcc
Q 010673 137 TWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASE--AVEFLRGIFGLYDID----NDGAVRPAELEDLFLT 205 (504)
Q Consensus 137 ~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~--~~~~l~~lf~~~D~d----~dG~l~~~e~~~l~~~ 205 (504)
+.++|+.||.| +|.|+.++| . .+.. ..+.. ..+++.+||+++|.| +||.|+++||..++..
T Consensus 82 l~~aF~~fD~~-~G~Is~~EL~~-fL~~------~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 82 IDRAFEEAAGS-AETLSVERLVT-FLQH------QQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp HHHHHHHHHTT-SSSEEHHHHHH-HHHH------TSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HHHHHHHhcCC-CCeecHHHHHH-HHHH------HhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 99999999985 899999988 5 3311 01111 236789999999998 7999999999887764
No 282
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2
Probab=99.26 E-value=1.2e-11 Score=123.45 Aligned_cols=148 Identities=16% Similarity=0.152 Sum_probs=91.3
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCCC-CCC-CccceEEEEEEEcCCCc---------------EEEEEEecCChhhHh
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSEN-YAP-TTGEQYAVNVVDQPGGN---------------KKTLILQEIPEEGVK 347 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~~-~~~-T~~~~~~~~~v~~~~~~---------------~~~li~d~~g~~~~~ 347 (504)
++|+|+|.||||||||+|+|++..+... ++. |..... ..+.+++.. ..+.+||++|.....
T Consensus 3 ~kI~IVG~pnvGKSTL~n~Lt~~~~~v~~~p~tTi~p~~--g~v~~~~~r~~~l~~~~~~~~~~~~~i~lvDtpGl~~~a 80 (363)
T 1jal_A 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNT--GVVPMPDPRLDALAEIVKPERILPTTMEFVDIAGLVAGA 80 (363)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHTC------CCCCCCCCS--SEEECCCHHHHHHHHHHCCSEEECCEEEEEECCSCCTTH
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCcccCCCCceECceE--EEEecCCcccceeeeeecccceeeeEEEEEECCCCcccc
Confidence 6899999999999999999999874332 222 333222 135555211 357789999875432
Q ss_pred ----hhhh-hhhhcccccEEEEEEeCCCc----------ccHHHHHHHHHHH----------------------------
Q 010673 348 ----KILS-NKEALASCDVTIFVYDSSDE----------YSWKRTKELLVEV---------------------------- 384 (504)
Q Consensus 348 ----~~~~-~~~~~~~ad~iilV~D~s~~----------~s~~~~~~~~~~l---------------------------- 384 (504)
++.. ...+++.+|++++|+|+++. +.+.++..+..++
T Consensus 81 ~~~~gl~~~fl~~ir~ad~il~VvD~~~~~~v~~v~~~~dp~~d~~~i~~EL~~~d~~~~~k~~~~~~k~~k~g~~~~~~ 160 (363)
T 1jal_A 81 SKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKF 160 (363)
T ss_dssp HHHGGGTCCHHHHHHTCSEEEEEEECSCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred cccchHHHHHHHHHHhcCeEEEEEecCCCCceeeecCCcChHHHHHHHHHHHHhhhHHHHhhHHHHHHHHhhccchhHHH
Confidence 2221 13467999999999999862 2333333222221
Q ss_pred ------------HHhc-----------------cCCCCCCcEEEEEECCCCCC-CccchHHHHHHHHHhCCCCeEEEecc
Q 010673 385 ------------ARLG-----------------EDSGYGVPCLLIASKDDLKP-YTMAVQDSARVTQELGIEPPIPVSMK 434 (504)
Q Consensus 385 ------------~~~~-----------------~~~~~~~piilV~NK~Dl~~-~~~~~~~~~~~~~~~~~~~~~~vSak 434 (504)
.... ......+|+++|+||.|..- .......+.+++...+.+ ++++||+
T Consensus 161 ~~~~l~~~~~~L~~~~~~~~~~~~~~e~~~l~~~~llt~KPvi~v~N~~e~~~~~n~~~~~v~~~~~~~~~~-~i~~sA~ 239 (363)
T 1jal_A 161 ELSVMEKILPVLENAGMIRSVGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAV-VVPVCAA 239 (363)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSCCCHHHHHHHGGGCCSTTSCEEEEEECCTTCSSSCHHHHHHHHHHHHTTCE-EEEECHH
T ss_pred HHHHHHHHHHHHhcCCCccccCCCHHHHHHHHHhhcccCCcEEEEEecccccccccHHHHHHHHHHHHcCCC-EEEechH
Confidence 0000 00123589999999999653 222344778888888876 8999976
Q ss_pred c
Q 010673 435 S 435 (504)
Q Consensus 435 ~ 435 (504)
.
T Consensus 240 ~ 240 (363)
T 1jal_A 240 I 240 (363)
T ss_dssp H
T ss_pred H
Confidence 4
No 283
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=99.24 E-value=1.5e-11 Score=123.17 Aligned_cols=154 Identities=16% Similarity=0.192 Sum_probs=87.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcC------CCCC-CCCCCcc-------------------ceEEEEEEE-------
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLER------PFSE-NYAPTTG-------------------EQYAVNVVD------- 327 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~------~~~~-~~~~T~~-------------------~~~~~~~v~------- 327 (504)
.+....|+|+|+||||||||+|+|++. +... ...|++. +...+....
T Consensus 71 ~~~~~~v~lvG~pgaGKSTLln~L~~~~~~~~~~v~V~~~dp~~~~~~g~~l~d~~rm~~~~~~~~~~v~~~~~~~~lgg 150 (349)
T 2www_A 71 KPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELSRDMNAYIRPSPTRGTLGG 150 (349)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC----------------CCSTTCTTEEEECC--------
T ss_pred ccCceEEEEEcCCCCCHHHHHHHHHHHhhhcCCeEEEEeecCCCCCcCcchhchHHHHHHhcCCCCEEEEecCCcccccc
Confidence 356889999999999999999999962 1100 0111100 001110000
Q ss_pred -c----------CCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCc
Q 010673 328 -Q----------PGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVP 396 (504)
Q Consensus 328 -~----------~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~p 396 (504)
. ..+...++++|++|..... ......+|++++|+|++++...+.+.. .+ -..|
T Consensus 151 ~tr~~~~~~~~~~~~~~~~iliDT~Gi~~~~-----~~l~~~~d~vl~V~d~~~~~~~~~i~~---~i--------l~~~ 214 (349)
T 2www_A 151 VTRTTNEAILLCEGAGYDIILIETVGVGQSE-----FAVADMVDMFVLLLPPAGGDELQGIKR---GI--------IEMA 214 (349)
T ss_dssp -CTTHHHHHHHHHHTTCSEEEEECCCC--CH-----HHHHTTCSEEEEEECCC-----------------------CCSC
T ss_pred chHHHHHHHHhhccCCCCEEEEECCCcchhh-----hhHHhhCCEEEEEEcCCcchhHHHhHH---HH--------HhcC
Confidence 0 0012456788998852111 224578999999999987643322111 11 1568
Q ss_pred EEEEEECCCCCCCccchHHHHHHHHHhC---------CCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 397 CLLIASKDDLKPYTMAVQDSARVTQELG---------IEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 397 iilV~NK~Dl~~~~~~~~~~~~~~~~~~---------~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
.++|+||+|+............+...+. .++++.+||++ .|++++++.|.+.+.
T Consensus 215 ~ivVlNK~Dl~~~~~~~~~~~~l~~~l~~~~~~a~~~~~~vi~iSA~~g~Gi~~L~~~I~~~~~ 278 (349)
T 2www_A 215 DLVAVTKSDGDLIVPARRIQAEYVSALKLLRKRSQVWKPKVIRISARSGEGISEMWDKMKDFQD 278 (349)
T ss_dssp SEEEECCCSGGGHHHHHHHHHHHHHHHTTCC-----CCCEEEECCTTTCTTHHHHHHHHHHHHH
T ss_pred CEEEEeeecCCCchhHHHHHHHHHHHHHhcCccccCCCceEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8999999998642221112333332211 23478999999 999999999998764
No 284
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=99.24 E-value=1.1e-13 Score=129.87 Aligned_cols=57 Identities=14% Similarity=0.171 Sum_probs=42.9
Q ss_pred CCcEEEEEECCCCCCCcc-chHHHHHHHHHhC-CCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 394 GVPCLLIASKDDLKPYTM-AVQDSARVTQELG-IEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 394 ~~piilV~NK~Dl~~~~~-~~~~~~~~~~~~~-~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
+.|.++|+||+|+..... ..+...++++.++ ..+++++||++ .|++++|+.|.+.+.
T Consensus 164 ~~~~iiv~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~g~gv~~l~~~l~~~~~ 223 (226)
T 2hf9_A 164 KTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVK 223 (226)
T ss_dssp TTCSEEEEECGGGHHHHTCCHHHHHHHHHHHCTTSEEEECCTTTCTTHHHHHHHHHHHHH
T ss_pred hcCCEEEEeccccCchhHHHHHHHHHHHHHhCCCCeEEEEEecCCCCHHHHHHHHHHHHH
Confidence 467899999999865432 2345666666653 22489999999 999999999988764
No 285
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=99.24 E-value=1.4e-11 Score=123.91 Aligned_cols=103 Identities=8% Similarity=0.080 Sum_probs=68.7
Q ss_pred EEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc
Q 010673 333 KKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA 412 (504)
Q Consensus 333 ~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~ 412 (504)
..++++|++|..... ...+..+|++++|+|.+..+.+..+. .. ..+.|+++|+||+|+......
T Consensus 172 ~~~iiiDTpGi~~~~-----~~~~~~aD~vl~V~d~~~~~~~~~l~-------~~----~~~~p~ivVlNK~Dl~~~~~~ 235 (355)
T 3p32_A 172 FDVILIETVGVGQSE-----VAVANMVDTFVLLTLARTGDQLQGIK-------KG----VLELADIVVVNKADGEHHKEA 235 (355)
T ss_dssp CCEEEEEECSCSSHH-----HHHHTTCSEEEEEEESSTTCTTTTCC-------TT----SGGGCSEEEEECCCGGGHHHH
T ss_pred CCEEEEeCCCCCcHH-----HHHHHhCCEEEEEECCCCCccHHHHH-------Hh----HhhcCCEEEEECCCCcChhHH
Confidence 467789999852211 22458899999999987765443221 11 125799999999998754332
Q ss_pred hHHHHHHHHH---hC------CCCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 413 VQDSARVTQE---LG------IEPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 413 ~~~~~~~~~~---~~------~~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
.....++... ++ ..+++++||++ .|++++++.|.+.+..
T Consensus 236 ~~~~~~l~~~l~~~~~~~~~~~~~vi~iSA~~g~Gi~~L~~~i~~~~~~ 284 (355)
T 3p32_A 236 RLAARELSAAIRLIYPREALWRPPVLTMSAVEGRGLAELWDTVERHRQV 284 (355)
T ss_dssp HHHHHHHHHHHHHHSTTCCSCCCCEEEEBGGGTBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccCCCCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 2233333333 21 13489999999 9999999999988743
No 286
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=99.23 E-value=1.3e-11 Score=130.83 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=82.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCC---CCCCCCccceEEEEE---------------------------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFS---ENYAPTTGEQYAVNV--------------------------------- 325 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~---~~~~~T~~~~~~~~~--------------------------------- 325 (504)
...++|+|+|.+|||||||+|+|++..+. ....+++.....+..
T Consensus 63 ~~~~~V~vvG~~n~GKSTLIN~Llg~~~~~~~vs~~p~T~~~~~i~~~~~~~i~~g~~l~~~~~~~~~~L~~~g~~~~~~ 142 (550)
T 2qpt_A 63 DGKPMVLVAGQYSTGKTSFIQYLLEQEVPGSRVGPEPTTDCFVAVMHGETEGTVPGNALVVDPEKPFRKLNPFGNTFLNR 142 (550)
T ss_dssp SSCCEEEEEEBTTSCHHHHHHHHHTSCCSSCCCCSSCCCCSEEEEECCSSSEEECCC------------------CCCTT
T ss_pred cCCcEEEEECCCCCCHHHHHHHHhCCccccCccCCCCccceEEEEEECCcccccCCceeeecCcccHHHHhhhccccccc
Confidence 46789999999999999999999999874 233343321111000
Q ss_pred ---EEcCCCc--EEEEEEecCChhh-----------HhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhcc
Q 010673 326 ---VDQPGGN--KKTLILQEIPEEG-----------VKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGE 389 (504)
Q Consensus 326 ---v~~~~~~--~~~li~d~~g~~~-----------~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~ 389 (504)
+.++ +. ..+.+||++|... +.... ..++..+|++|+|+|+++.........|+..+...
T Consensus 143 ~~~~~~~-~~ll~~l~lIDTPG~~~~~~~~~~~~~~f~~~~--~~~l~~aD~il~VvDa~~~~~~~~~~~~l~~l~~~-- 217 (550)
T 2qpt_A 143 FMCAQLP-NQVLESISIIDTPGILSGAKQRVSRGYDFPAVL--RWFAERVDLIILLFDAHKLEISDEFSEAIGALRGH-- 217 (550)
T ss_dssp EEEEECC-CHHHHHCEEEECCCBCC-------CCSCHHHHH--HHHHHHCSEEEEEEETTSCCCCHHHHHHHHHTTTC--
T ss_pred ceEEecc-ccccCCEEEEECcCCCCcchhHHHHHhhHHHHH--HHHHHhCCEEEEEEeCCcCCCCHHHHHHHHHHHhc--
Confidence 0000 00 2466899998753 22222 45678999999999998865555556777666532
Q ss_pred CCCCCCcEEEEEECCCCCCCccc
Q 010673 390 DSGYGVPCLLIASKDDLKPYTMA 412 (504)
Q Consensus 390 ~~~~~~piilV~NK~Dl~~~~~~ 412 (504)
+.|+++|+||+|+....+.
T Consensus 218 ----~~pvilVlNK~Dl~~~~el 236 (550)
T 2qpt_A 218 ----EDKIRVVLNKADMVETQQL 236 (550)
T ss_dssp ----GGGEEEEEECGGGSCHHHH
T ss_pred ----CCCEEEEEECCCccCHHHH
Confidence 6899999999999875443
No 287
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.22 E-value=2.4e-11 Score=101.67 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=62.0
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHH----HcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVK----CFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~----~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
++++..|+++|..||.| ||.||.+||..++++ .+|..+++++++.|++.+|.| ++|.|+|+||+.++..
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d-----~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQC-----RDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTT-----CSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCC-----CCCcCcHHHHHHHHHH
Confidence 67789999999999999 899999999998764 368999999999999999988 5778999999988764
No 288
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=99.18 E-value=6e-11 Score=118.89 Aligned_cols=150 Identities=15% Similarity=0.109 Sum_probs=103.3
Q ss_pred CCchhhHH--HHHHhcCCCCCC-------CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEE
Q 010673 293 QNAGKSAL--LNSFLERPFSEN-------YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTI 363 (504)
Q Consensus 293 ~~vGKSSL--in~l~~~~~~~~-------~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~ii 363 (504)
+.+.|--| +.++....+.++ ..+|++.. ...+.++ ...+.+||++|++.++..+ ..++++++++|
T Consensus 156 ~ds~~yfl~~~~ri~~~~Y~PT~~Dil~~r~~T~Gi~--~~~~~~~--~~~l~i~Dt~Gq~~~r~~w--~~~f~~~~~iI 229 (362)
T 1zcb_A 156 GESVKYFLDNLDKLGVPDYIPSQQDILLARRPTKGIH--EYDFEIK--NVPFKMVDVGGQRSERKRW--FECFDSVTSIL 229 (362)
T ss_dssp CTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCSSEE--EEEEEET--TEEEEEEEECC-------C--TTSCTTCCEEE
T ss_pred cccHHHHHHHHHHHhcCCCCCChhhhhhccCCccceE--EEEeeeC--CeEEEEEeccchhhhhhhH--HHHhCCCCEEE
Confidence 45666655 777777666543 23566643 3445555 3778899999998888887 56899999999
Q ss_pred EEEeCCC----------cccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc-----------------cchHHH
Q 010673 364 FVYDSSD----------EYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT-----------------MAVQDS 416 (504)
Q Consensus 364 lV~D~s~----------~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~-----------------~~~~~~ 416 (504)
+|||+++ ..++.+...|+..+..... ..++|+|+|+||+|+..++ ...+++
T Consensus 230 fv~dls~~dq~l~ed~~~n~~~es~~~~~~i~~~~~--~~~~piILv~NK~DL~~~ki~~~~l~~~fp~y~g~~~~~~e~ 307 (362)
T 1zcb_A 230 FLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRV--FSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDV 307 (362)
T ss_dssp EEEETTCTTCEETTEEEEEHHHHHHHHHHHHHTCGG--GTTSEEEEEEECHHHHHHHTTTCCGGGTCTTCCSCTTCHHHH
T ss_pred EEEECccccccccccccccHHHHHHHHHHHHhcchh--hCCCCEEEEEEChhhhhhhccccchhhcCccccCCCCCHHHH
Confidence 9999999 7889999999988875421 3579999999999986321 223455
Q ss_pred HHHHH-----------HhCCCCeEEEeccc-cCHHHHHHHHHHHHhC
Q 010673 417 ARVTQ-----------ELGIEPPIPVSMKS-KDLNNVFSRIIWAAEH 451 (504)
Q Consensus 417 ~~~~~-----------~~~~~~~~~vSak~-~gi~el~~~l~~~~~~ 451 (504)
.+++. ..++ .+++|||++ .||+++|+.+.+.+..
T Consensus 308 ~~~~~~~f~~l~~~~~~~~~-~~~~tSA~d~~nV~~vF~~v~~~i~~ 353 (362)
T 1zcb_A 308 QKFLVECFRGKRRDQQQRPL-YHHFTTAINTENIRLVFRDVKDTILH 353 (362)
T ss_dssp HHHHHHHHHTTCSSCC--CC-EEEECCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCce-EEEEEecCCchhHHHHHHHHHHHHHH
Confidence 55542 2233 378999999 9999999999987753
No 289
>2xtz_A Guanine nucleotide-binding protein alpha-1 subuni; hydrolase, G-protein signaling, SELF-activation, RAS-like DO; HET: GSP; 2.34A {Arabidopsis thaliana}
Probab=99.17 E-value=4.9e-11 Score=119.10 Aligned_cols=115 Identities=11% Similarity=0.038 Sum_probs=87.8
Q ss_pred cEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCC----------CcccHHHHHHHHHHHHHhccCCCCCCcEEEEE
Q 010673 332 NKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSS----------DEYSWKRTKELLVEVARLGEDSGYGVPCLLIA 401 (504)
Q Consensus 332 ~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s----------~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~ 401 (504)
...+.+||++|++.++.++ ..++++++++|+|||++ +..+|++...|+..+..... ..++|+++|+
T Consensus 182 ~v~l~iwDtaGQe~~r~~~--~~y~~~~~~iI~v~dis~ydq~l~e~~~~~s~~~~~~~~~~i~~~~~--~~~~piiLvg 257 (354)
T 2xtz_A 182 GEVYRLFDVGGQRNERRKW--IHLFEGVTAVIFCAAISEYDQTLFEDEQKNRMMETKELFDWVLKQPC--FEKTSFMLFL 257 (354)
T ss_dssp --EEEEEEECCSTTGGGGT--GGGCTTEEEEEEEEEGGGTTCBCSSCTTSBHHHHHHHHHHHHHTCGG--GSSCEEEEEE
T ss_pred ceeeEEEECCCchhhhHHH--HHHhCCCCEEEEEEECcccccccccccchhHHHHHHHHHHHHHhccc--cCCCeEEEEE
Confidence 4667789999999998888 56999999999999998 78899999999988876421 3579999999
Q ss_pred ECCCCCCCcc----------------------chHHHHHHHHH-h-------------CCC-CeEEEeccc-cCHHHHHH
Q 010673 402 SKDDLKPYTM----------------------AVQDSARVTQE-L-------------GIE-PPIPVSMKS-KDLNNVFS 443 (504)
Q Consensus 402 NK~Dl~~~~~----------------------~~~~~~~~~~~-~-------------~~~-~~~~vSak~-~gi~el~~ 443 (504)
||+|+..++. ..+++.+++.. + +.. .+++|||++ .||+++|+
T Consensus 258 NK~DL~~~k~~~v~l~~~~~fp~y~~~~~~~~~~~~a~~~~~~~f~~l~~~~~~~~~~~~~~~~~eTSA~d~~nV~~vF~ 337 (354)
T 2xtz_A 258 NKFDIFEKKVLDVPLNVCEWFRDYQPVSSGKQEIEHAYEFVKKKFEELYYQNTAPDRVDRVFKIYRTTALDQKLVKKTFK 337 (354)
T ss_dssp ECHHHHHHHTTTSCGGGSGGGTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred ECcchhhhhcccccccccccccccccccCCCcCHHHHHHHHHHHHHHhhhccccccccCcceEEEEEEeecchhHHHHHH
Confidence 9999843221 12355555432 1 112 258999999 99999999
Q ss_pred HHHHHHh
Q 010673 444 RIIWAAE 450 (504)
Q Consensus 444 ~l~~~~~ 450 (504)
.+.+.+.
T Consensus 338 ~v~~~I~ 344 (354)
T 2xtz_A 338 LVDETLR 344 (354)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998774
No 290
>2dby_A GTP-binding protein; GDP, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: GDP; 1.76A {Thermus thermophilus} PDB: 2dwq_A
Probab=99.17 E-value=5.1e-11 Score=119.54 Aligned_cols=157 Identities=16% Similarity=0.099 Sum_probs=94.1
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCCC-CCCC-CccceEEEEEEEcCC-------------------CcEEEEEEecCCh
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFSE-NYAP-TTGEQYAVNVVDQPG-------------------GNKKTLILQEIPE 343 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~~-~~~~-T~~~~~~~~~v~~~~-------------------~~~~~li~d~~g~ 343 (504)
++|+++|.||||||||+|+|++..... .++. |....... +.+++ ....+.+||++|.
T Consensus 2 ~~v~IVG~pnvGKSTL~n~L~~~~~~v~~~p~~Ti~pn~g~--~~v~~~~l~~~~~~~~~~~~~~~~~~~~i~lvDtpGl 79 (368)
T 2dby_A 2 LAVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGV--VPLEDERLYALQRTFAKGERVPPVVPTHVEFVDIAGL 79 (368)
T ss_dssp CSEEEECCSSSSHHHHHHHHHHHHTTCSSCCGGGGSTTEEE--EECCCHHHHHHHHHHCBTTBCCCEECCEEEEEECCSC
T ss_pred cEEEEECCCCCCHHHHHHHHhCCCCcccCCCCceeccceee--EecChHHHHHHHHHhcccccccccCCceEEEEECCCc
Confidence 579999999999999999999875322 2222 33333322 23331 1135678999987
Q ss_pred hhHh----hhh-hhhhhcccccEEEEEEeCCCc----------ccHHHHHHHHHHH------------------------
Q 010673 344 EGVK----KIL-SNKEALASCDVTIFVYDSSDE----------YSWKRTKELLVEV------------------------ 384 (504)
Q Consensus 344 ~~~~----~~~-~~~~~~~~ad~iilV~D~s~~----------~s~~~~~~~~~~l------------------------ 384 (504)
.... ++. .....++.+|++++|+|+++. +.+.++..+..++
T Consensus 80 ~~~a~~~~~lg~~fl~~ir~ad~ii~VvD~~~~~~~~~v~~~~dp~~d~~~i~~EL~~~d~~~l~k~~~~~~~~~~~~~~ 159 (368)
T 2dby_A 80 VKGAHKGEGLGNQFLAHIREVAAIAHVLRCFPDPDVVHVMGRVDPLEDAEVVETELLLADLATLERRLERLRKEARADRE 159 (368)
T ss_dssp CCCCCSSSCTTHHHHHHHHTCSEEEEEEECCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred cccccccchHHHHHHHHHHhCCEEEEEEECCCCCceeEeecccChHHHHHHHhhHHHHccHHHHHHHHHHHHhhhccchh
Confidence 4421 121 123467999999999999862 2222221111111
Q ss_pred -----------HHh---c-c-----------------CCCCCCcEEEEEECCCC--CCC--ccchHHHHHHHHHhCCCCe
Q 010673 385 -----------ARL---G-E-----------------DSGYGVPCLLIASKDDL--KPY--TMAVQDSARVTQELGIEPP 428 (504)
Q Consensus 385 -----------~~~---~-~-----------------~~~~~~piilV~NK~Dl--~~~--~~~~~~~~~~~~~~~~~~~ 428 (504)
... . . .....+|+++|+||+|. ... +...+.++++++..+.+ +
T Consensus 160 ~~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~lt~KPvi~v~N~~e~d~~~~~~n~~~~~v~~~a~~~g~~-v 238 (368)
T 2dby_A 160 RLPLLEAAEGLYVHLQEGKPARTFPPSEAVARFLKETPLLTAKPVIYVANVAEEDLPDGRGNPQVEAVRRKALEEGAE-V 238 (368)
T ss_dssp GHHHHHHHHHHHHHHHTTCCGGGSCCCHHHHHHHHHSCCGGGSCEEEEEECCGGGTTTCTTCHHHHHHHHHHHHHTCE-E
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHhhhhcCCeEEeccccHHhhcccchhhHHHHHHHHHHHcCCe-E
Confidence 000 0 0 00124799999999984 232 33344788888888875 8
Q ss_pred EEEeccc-cCHHHHHHH
Q 010673 429 IPVSMKS-KDLNNVFSR 444 (504)
Q Consensus 429 ~~vSak~-~gi~el~~~ 444 (504)
+++||+. .++.++.+.
T Consensus 239 v~iSAk~E~el~eL~~~ 255 (368)
T 2dby_A 239 VVVSARLEAELAELSGE 255 (368)
T ss_dssp EEECHHHHHHHHTSCHH
T ss_pred EEeechhHHHHHHhchH
Confidence 9999988 766665543
No 291
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.16 E-value=2.2e-11 Score=100.24 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=82.2
Q ss_pred HcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC
Q 010673 86 CFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS 164 (504)
Q Consensus 86 ~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~ 164 (504)
.+|..++++|++.+++.++ ++|.|++++|+.++.. .....++++.+|+.||.|++|.|+.++| . .+.
T Consensus 2 al~~~~~~~ei~~~~~~~D-------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~-~l~-- 69 (109)
T 3fs7_A 2 AITDILSAKDIESALSSCQ-------AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQL-FLK-- 69 (109)
T ss_dssp CGGGTSCHHHHHHHHHHTC-------STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHT-TGG--
T ss_pred CccCcCCHHHHHHHHHhcC-------CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHH-HHH--
Confidence 3688999999999999995 3667999999987653 2344578999999999999999999999 6 331
Q ss_pred CCCcccc---ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 165 PDQSVEL---ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 165 ~~~~~~l---~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.+ +... .+.+.++|+.+|.|+||.|+++||..++.
T Consensus 70 -----~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 70 -----NFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp -----GTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred -----HHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 22 2112 36789999999999999999999998875
No 292
>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A* 3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C* 1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C* 3maa_C* 1cul_C* 3sn6_A*
Probab=99.16 E-value=1.5e-10 Score=116.92 Aligned_cols=127 Identities=13% Similarity=0.053 Sum_probs=95.3
Q ss_pred CCccceEEEEEEEcCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCC----------cccHHHHHHHHHHH
Q 010673 315 PTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSD----------EYSWKRTKELLVEV 384 (504)
Q Consensus 315 ~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~----------~~s~~~~~~~~~~l 384 (504)
+|++.. ...+.+. + ..+.+||+.|++.++.++ ..++++++++|+|||+++ ..+|..+..|+..+
T Consensus 203 ~TiGi~--~~~~~~~-~-v~l~iwDtaGQe~~r~~w--~~yf~~a~~iIfV~dis~ydq~l~ed~~~ns~~e~~~~~~~i 276 (402)
T 1azs_C 203 LTSGIF--ETKFQVD-K-VNFHMFDVGGQRDERRKW--IQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSI 276 (402)
T ss_dssp CCCSEE--EEEEEET-T-EEEEEEEECCSGGGGGGG--GGGTTTCCEEEEEEETTGGGCBCTTTSCSBHHHHHHHHHHHH
T ss_pred ceeeeE--EEEeecC-C-ccceecccchhhhhhhhh--HhhccCCCEEEEEEECcccccccccccccchHHHHHHHHHHH
Confidence 355543 3445665 3 778899999999999888 568999999999999999 89999999999998
Q ss_pred HHhccCCCCCCcEEEEEECCCCCCCcc---c----------------------------hHHHHHH-----HHHh-----
Q 010673 385 ARLGEDSGYGVPCLLIASKDDLKPYTM---A----------------------------VQDSARV-----TQEL----- 423 (504)
Q Consensus 385 ~~~~~~~~~~~piilV~NK~Dl~~~~~---~----------------------------~~~~~~~-----~~~~----- 423 (504)
..... ..++|+++|+||+|+...+. . .+.+..| +..+
T Consensus 277 ~~~~~--~~~~piiLvgNK~DL~~~ki~~~~~~l~~~fp~y~~~~~~~~~~~~~g~~~~~~~a~~fi~~kF~~~~~~~~~ 354 (402)
T 1azs_C 277 WNNRW--LRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGD 354 (402)
T ss_dssp HTCTT--CSSCCEEEEEECHHHHHHHHHHCSSCGGGTCGGGGTCCCCSSCCCCTTCCHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred Hhccc--CCCCeEEEEEEChhhhhhhhcccccchhhccccccccccccccccccCCcccHHHHHHHHHHHHHHhhccccc
Confidence 76421 35899999999999854221 1 1244444 2321
Q ss_pred ---CCCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 424 ---GIEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 424 ---~~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
++ .+++|||++ .||+++|..+.+.+.
T Consensus 355 ~~~~~-~~~~TSA~d~~nV~~vF~~v~~~I~ 384 (402)
T 1azs_C 355 GRHYC-YPHFTCAVDTENIRRVFNDCRDIIQ 384 (402)
T ss_dssp TSSCE-EEEECCTTCHHHHHHHHHHHHHHHH
T ss_pred cCccc-EEEEEEeecCcCHHHHHHHHHHHHH
Confidence 22 267999999 999999999988765
No 293
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.15 E-value=3.2e-11 Score=99.15 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=81.1
Q ss_pred HcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC
Q 010673 86 CFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS 164 (504)
Q Consensus 86 ~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~ 164 (504)
.+|. +++++++.|++.++ ++|.|+|++|+.++.. .....++++.+|+.||.|++|.|+.++| . .+.
T Consensus 2 slG~-~~~~e~~~l~~~~d-------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~-- 68 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS-------AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKL-FLQ-- 68 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC-------STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHT-GGG--
T ss_pred CcCC-CCHHHHHHHHHHhC-------CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHH-HHH--
Confidence 5789 99999999999985 2567999999987642 2344568999999999999999999999 6 431
Q ss_pred CCCcccc---ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 165 PDQSVEL---ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 165 ~~~~~~l---~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.+ +... .+++.++|+.+|.|+||.|+++||..++.
T Consensus 69 -----~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 69 -----NFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp -----GTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred -----HHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 12 1111 26788999999999999999999998764
No 294
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.15 E-value=3.9e-12 Score=143.18 Aligned_cols=135 Identities=11% Similarity=0.109 Sum_probs=98.1
Q ss_pred cchHHH-HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcC-------CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhH
Q 010673 50 TLKPRC-VRALKRIFIICDHDMDGALNDAELNEFQVKCFN-------APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGF 121 (504)
Q Consensus 50 ~l~~~~-~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g-------~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~F 121 (504)
.|++++ +++|+++|..+| |+||.|+.+||..++..+.. ..++.++++.|++.+|.+ ++|.|++++|
T Consensus 526 ~l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d-----~~G~I~~~EF 599 (900)
T 1qxp_A 526 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRD-----GNGKLGLVEF 599 (900)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC-------CCCCCSSSH
T ss_pred CCCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCC-----CCCcCCHHHH
Confidence 366555 889999999999 99999999999888775432 289999999999999877 4677999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHH
Q 010673 122 LFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAEL 199 (504)
Q Consensus 122 l~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~ 199 (504)
+.++... +++..+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+| |+||.|+++||
T Consensus 600 ~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~-~l-------~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF 664 (900)
T 1qxp_A 600 NILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRM-AI-------EAAGFKLPCQLHQVIVARFA-DDELIIDFDNF 664 (900)
T ss_dssp HHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHH-HH-------HHTTEECCHHHHHHHHHHTS-CSSSBCCHHHH
T ss_pred HHHHHHH------HHHHHHHHhhCCCCCCeECHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHH
Confidence 9887653 67999999999999999999998 5 33 1222222 267889999999 99999999999
Q ss_pred hhhhcc
Q 010673 200 EDLFLT 205 (504)
Q Consensus 200 ~~l~~~ 205 (504)
..++..
T Consensus 665 ~~~~~~ 670 (900)
T 1qxp_A 665 VRCLVR 670 (900)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 295
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.14 E-value=1e-11 Score=114.62 Aligned_cols=158 Identities=20% Similarity=0.172 Sum_probs=116.1
Q ss_pred hhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc-CCchhHHHHHHh
Q 010673 65 ICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK-GRLETTWAVLRK 143 (504)
Q Consensus 65 ~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~-~~~e~~~~~~~~ 143 (504)
.++.|++|.|+.+||..+++. +| ++++++..+++.++.++ ++|.|++++|..++...... ...+++..+|+.
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~-~~--~~~~~i~~~f~~~d~~~----~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~ 79 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLN-TK--FSEEELCSWYQSFLKDC----PTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRS 79 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHH-SS--CCHHHHHHHHHHHHHHC----TTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHH
T ss_pred hhccccCCCCCHHHHHHHHHH-cC--CCHHHHHHHHHHHHhhC----CCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHH
Confidence 378999999999999999774 45 79999999999998862 25569999999887654332 344679999999
Q ss_pred hcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccC---------CCCCCC
Q 010673 144 FGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTA---------PESPWD 212 (504)
Q Consensus 144 f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~---------p~~p~~ 212 (504)
+|.|++|.|+.+++ . .+. .++... .+.+..+|+.+|.|++|.|+++||..++... +.++..
T Consensus 80 ~D~d~~G~i~~~Ef~~-~~~-------~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~ 151 (207)
T 2d8n_A 80 FDSNLDGTLDFKEYVI-ALH-------MTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDD 151 (207)
T ss_dssp HCTTCCSEEEHHHHHH-HHH-------HHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTT
T ss_pred hcCCCCCeEeHHHHHH-HHH-------HHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccc
Confidence 99999999998888 5 221 111111 1568899999999999999999999988753 333321
Q ss_pred C-------CccccccccccCCcccHHHHHHhh
Q 010673 213 E-------APYKDAAETTALGNLTLKGFVSKW 237 (504)
Q Consensus 213 ~-------~~~~~~~~~~~~g~i~~~~~l~~w 237 (504)
. .........+..|.|++..|+...
T Consensus 152 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 183 (207)
T 2d8n_A 152 ENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGT 183 (207)
T ss_dssp TSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHH
T ss_pred cccHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 1 011233445678999999996653
No 296
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=99.13 E-value=6.7e-11 Score=128.06 Aligned_cols=157 Identities=16% Similarity=0.134 Sum_probs=99.0
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCCC-CCCccceE---------------------------------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSENY-APTTGEQY--------------------------------------- 321 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~-~~T~~~~~--------------------------------------- 321 (504)
...++|+|+|.+++|||||+|+|++..+.+.. .++|+.-.
T Consensus 49 i~lp~I~vvG~~saGKSSllnaL~g~~~LP~g~g~~Tr~Pl~l~l~~~~~~~~~~l~~~~~~~~~~~~v~~~I~~~~~~~ 128 (772)
T 3zvr_A 49 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRV 128 (772)
T ss_dssp GCCSEEEEEECTTTCHHHHHHHHHSSCCSCCSSSCSCSSCEEEEEEECSSCEEECSTTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhCCCccCcCCccccccceEEEeecCCcchhheeccCCcccCCHHHHHHHHHHHHhhh
Confidence 46679999999999999999999998873221 12221100
Q ss_pred -----------EEEEEEcCCCcEEEEEEecCChhh-------------Hhhhhhhhhhc-ccccEEEEEEeCCCcccHHH
Q 010673 322 -----------AVNVVDQPGGNKKTLILQEIPEEG-------------VKKILSNKEAL-ASCDVTIFVYDSSDEYSWKR 376 (504)
Q Consensus 322 -----------~~~~v~~~~~~~~~li~d~~g~~~-------------~~~~~~~~~~~-~~ad~iilV~D~s~~~s~~~ 376 (504)
....+..+ +...+.++|++|-.. ...+. ..++ ..+|++++|+|+++...-.+
T Consensus 129 ~g~~~~is~~~i~l~I~~P-~~~qL~LVDTPGi~~~~~~~qp~di~~~i~~lv--~~yi~~~aDlIL~VVDAs~~~~~~d 205 (772)
T 3zvr_A 129 TGTNKGISPVPINLRVYSP-HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML--MQFVTKENCLILAVSPANSDLANSD 205 (772)
T ss_dssp HCSTTCCCSCCEEEEEEET-TCCSEEEEECCCCCCCCSSCCCCHHHHHHHHHH--HHHHTSTTEEEEEEEETTSCSSSCH
T ss_pred cCCCCcccccceEEEEecC-CCCceEEEECCCcccCCCCCCcHHHHHHHHHHH--HHHHhcCCcEEEEEEcCCCCcchhH
Confidence 01112222 223466789988532 11222 2233 68999999999987644444
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHH----hCCCCeEEEeccc-cCHHHHHHHHHHH
Q 010673 377 TKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQE----LGIEPPIPVSMKS-KDLNNVFSRIIWA 448 (504)
Q Consensus 377 ~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~----~~~~~~~~vSak~-~gi~el~~~l~~~ 448 (504)
...++..+.. .+.|+++|+||+|+............ .+. ++..+++.+||++ .|+++|++.|.+.
T Consensus 206 ~l~ll~~L~~------~g~pvIlVlNKiDlv~~~~~~~~il~-~~~~~l~lg~~~VV~iSA~~G~GvdeL~eaI~~e 275 (772)
T 3zvr_A 206 ALKIAKEVDP------QGQRTIGVITKLDLMDEGTDARDVLE-NKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAE 275 (772)
T ss_dssp HHHHHHHHCT------TCSSEEEEEECTTSSCTTCCSHHHHT-TCSSCCSSCEEECCCCCCEESSSSEEHHHHHHHH
T ss_pred HHHHHHHHHh------cCCCEEEEEeCcccCCcchhhHHHHH-HHhhhhhccCCceEEecccccccchhHHHHHHHH
Confidence 3345555543 37899999999999865443221111 011 1222467899999 9999999999873
No 297
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.12 E-value=1.4e-10 Score=101.61 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=71.2
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcC
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKG 132 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~ 132 (504)
++...+++++|..||+|+||.|+.+||..+++ .+|..+++++++.++..++.+ ++|.|+|++|+.++...
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~e~~~l~~~~D~d-----~dg~I~~~eF~~~~~~~---- 115 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMME-KLGVPKTHLEMKKMISEVTGG-----VSDTISYRDFVNMMLGK---- 115 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHHTT-----SCSSBCHHHHHHHHHSS----
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHCCC-----CCCcEeHHHHHHHHHHh----
Confidence 68889999999999999999999999999987 469999999999999999877 46779999999877532
Q ss_pred CchhHHHHHHhhcCCCCccc
Q 010673 133 RLETTWAVLRKFGYGDDLEL 152 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i 152 (504)
.+++..+|+.||.|++|.-
T Consensus 116 -~~~i~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 116 -RSAVLKLVMMFEGKANESS 134 (150)
T ss_dssp -SCCHHHHHHC---------
T ss_pred -HHHHHHHHHHHcCCCCCCC
Confidence 5679999999999999974
No 298
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=99.12 E-value=1.7e-10 Score=93.46 Aligned_cols=71 Identities=18% Similarity=0.141 Sum_probs=62.9
Q ss_pred HHHHHHHHHhHhhhc-CCCC-CccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMD-GALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~d-G~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+.++..|++||+.|| +||| |+||.+||..+++.. +|.++++++++.|++.+|.+ ++|.|+|+||+.++.
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~d-----gDG~Idf~EF~~~~~ 80 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN-----KDCEVDFVEYVRSLA 80 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHC-----CCSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCC-----CCCCCcHHHHHHHHH
Confidence 567899999999998 8998 999999999998864 46889999999999999988 577899999998876
Q ss_pred HH
Q 010673 127 LF 128 (504)
Q Consensus 127 ~~ 128 (504)
..
T Consensus 81 ~~ 82 (101)
T 3nso_A 81 CL 82 (101)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 299
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.12 E-value=2e-11 Score=100.65 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=82.0
Q ss_pred HcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC
Q 010673 86 CFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS 164 (504)
Q Consensus 86 ~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~ 164 (504)
++|..++++|++.+++.++ ++|.|++++|+.++.. .....+.++.+|+.||.|++|.|+.++| . .+..-
T Consensus 2 alG~~~t~~e~~~~~~~~d-------~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~~~ 71 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK-------AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKF-VLKSF 71 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC-------STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHT-GGGGT
T ss_pred cccccCCHHHHHHHHHhcC-------CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHH-HHHHH
Confidence 5688999999999999985 3667999999987632 2334568999999999999999999999 6 43111
Q ss_pred CCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 165 PDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 165 ~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
. ..+.. ..+++..+|+.+|.|+||.|+++||..++.
T Consensus 72 ~----~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 72 A----ADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp C----TTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred h----hcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 0 00111 136788999999999999999999998875
No 300
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.11 E-value=1.4e-10 Score=130.51 Aligned_cols=84 Identities=13% Similarity=0.140 Sum_probs=71.1
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
+..++++|+.||+|+||.|+.+||..++.. +|..+++++++.++..++ + ++|.|++++|+.++... +
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~-~g~~l~~~~~~~l~~~~d-d-----~dg~I~~~eF~~~~~~~------~ 672 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEA-AGFKLPCQLHQVIVARFA-D-----DELIIDFDNFVRCLVRL------E 672 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHHH-TTEECCHHHHHHHHHHTS-C-----SSSBCCHHHHHHHHHHH------H
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHHH-hCCCCCHHHHHHHHHHhC-C-----CCCeEcHHHHHHHHHHH------H
Confidence 467899999999999999999999999874 699999999999999996 4 46679999999776542 4
Q ss_pred hHHHHHHhhcCCCCccc
Q 010673 136 TTWAVLRKFGYGDDLEL 152 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i 152 (504)
.++.+|+.+|.|++|.|
T Consensus 673 ~l~~~F~~~D~d~~G~I 689 (900)
T 1qxp_A 673 ILFKIFKQLDPENTGTI 689 (900)
T ss_dssp HHHHHHHHSCSSCCSCE
T ss_pred HHHHHHHhhCCCCCceE
Confidence 67778888888877766
No 301
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.10 E-value=3.3e-11 Score=132.24 Aligned_cols=142 Identities=8% Similarity=0.102 Sum_probs=91.4
Q ss_pred HHHHHHHhHh--hhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhcc-CC-cCCCCCCHHhHHHHHHHHHh
Q 010673 55 CVRALKRIFI--ICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQH-DG-VNDLGLTLSGFLFLHALFIE 130 (504)
Q Consensus 55 ~~~~l~~~F~--~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~-~~-~~~~~i~~~~Fl~l~~~~~~ 130 (504)
..+.|+++|. .||+|+||.|+..||...+ .. .+++++.+++.++.... .+ .++|.|+|++|+.++....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l----~~--~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~- 216 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMF----PA--DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC- 216 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHS----CS--CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS-
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHH----hh--hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc-
Confidence 3567999999 8999999999999996653 33 58999999999974211 11 2356699999998887643
Q ss_pred cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCC---ccccChhHH-HHHHHhhhhhcCC----CCCCCCHHHHhh
Q 010673 131 KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQ---SVELASEAV-EFLRGIFGLYDID----NDGAVRPAELED 201 (504)
Q Consensus 131 ~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~---~~~l~~~~~-~~l~~lf~~~D~d----~dG~l~~~e~~~ 201 (504)
..+++.++|+.||.|++|+|+.++| . -+...-+. +..|-+... +++.+||+++|.| +||.|+++||..
T Consensus 217 --~r~el~~aF~~fD~d~~g~Is~~eL~~-fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~ 293 (799)
T 2zkm_X 217 --PRPEIDEIFTSYHAKAKPYMTKEHLTK-FINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVW 293 (799)
T ss_dssp --CCHHHHTTCC--------CCCHHHHHH-HHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHH
T ss_pred --CHHHHHHHHHHhccCCCCeEcHHHHHH-HHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhh
Confidence 3578999999999999999999988 5 32100000 000111133 7789999999999 999999999988
Q ss_pred hhccC
Q 010673 202 LFLTA 206 (504)
Q Consensus 202 l~~~~ 206 (504)
++...
T Consensus 294 ~L~S~ 298 (799)
T 2zkm_X 294 FLCGP 298 (799)
T ss_dssp HHHST
T ss_pred cccCc
Confidence 88753
No 302
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.10 E-value=3.1e-10 Score=90.21 Aligned_cols=87 Identities=15% Similarity=0.213 Sum_probs=71.5
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
+++++....++++|..||.|+||.|+.+||..+++. +|.+++++++..++..++.+ ++|.|++++|+.++....
T Consensus 2 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~-----~dg~i~~~eF~~~~~~~~ 75 (92)
T 2kn2_A 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLD-----GDGQVNYEEFVKMMMTVR 75 (92)
T ss_dssp CCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSS-----CCSSEEHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHHhcc
Confidence 466778899999999999999999999999999874 69999999999999999776 466799999998876655
Q ss_pred hcCCc---hhHHHHHH
Q 010673 130 EKGRL---ETTWAVLR 142 (504)
Q Consensus 130 ~~~~~---e~~~~~~~ 142 (504)
..... ++++.+|+
T Consensus 76 ~~~~~~~~~~l~~aF~ 91 (92)
T 2kn2_A 76 GGGGGNGWSRLRRKFS 91 (92)
T ss_dssp TTCCCHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHhc
Confidence 43222 45666654
No 303
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.09 E-value=3.7e-11 Score=98.91 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=81.9
Q ss_pred HcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC
Q 010673 86 CFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS 164 (504)
Q Consensus 86 ~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~ 164 (504)
.+|.++++++++.+++.++ ++|.|+|++|+.++.. .....+.++.+|+.||.|++|.|+.++| . .+
T Consensus 2 slg~~~~~~e~~~~~~~~d-------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l--- 68 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE-------AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKL-FL--- 68 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC-------STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHT-HH---
T ss_pred cccccCCHHHHHHHHHHhC-------CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHH-HH---
Confidence 4799999999999999985 3667999999987642 2344568999999999999999999999 6 33
Q ss_pred CCCcccc---ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 165 PDQSVEL---ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 165 ~~~~~~l---~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
..+ +... .+++.++|+.+|.|+||.|+++||..++.
T Consensus 69 ----~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 69 ----QVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp ----HHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred ----HHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 122 1111 27788999999999999999999998764
No 304
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=99.09 E-value=1.1e-10 Score=116.48 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=63.7
Q ss_pred EEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc
Q 010673 333 KKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA 412 (504)
Q Consensus 333 ~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~ 412 (504)
..+.++|++|....... ....+|++++|+|++....+..+.. .. . +.|.++|+||+|+......
T Consensus 149 ~~i~liDTpG~~~~~~~-----~~~~aD~vl~Vvd~~~~~~~~~l~~---~~--~------~~p~ivv~NK~Dl~~~~~~ 212 (341)
T 2p67_A 149 YDVVIVETVGVGQSETE-----VARMVDCFISLQIAGGGDDLQGIKK---GL--M------EVADLIVINKDDGDNHTNV 212 (341)
T ss_dssp CSEEEEEEECCTTHHHH-----HHTTCSEEEEEECC------CCCCH---HH--H------HHCSEEEECCCCTTCHHHH
T ss_pred CCEEEEeCCCccchHHH-----HHHhCCEEEEEEeCCccHHHHHHHH---hh--h------cccCEEEEECCCCCChHHH
Confidence 46788999996433222 3579999999999976543221111 11 1 4688999999999764222
Q ss_pred hHHHHHHH---HHhC------CCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 413 VQDSARVT---QELG------IEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 413 ~~~~~~~~---~~~~------~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
.....++. ..++ .++++++||++ .|++++++.|.+.+.
T Consensus 213 ~~~~~~l~~~l~~~~~~~~~~~~~vi~iSA~~g~gi~~L~~~l~~~~~ 260 (341)
T 2p67_A 213 AIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKT 260 (341)
T ss_dssp HHHHHHHHHHHHHSCCSBTTBCCEEEECBGGGTBSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCCcEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 22222232 2223 23478999999 999999999998764
No 305
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=99.08 E-value=1.3e-10 Score=95.07 Aligned_cols=84 Identities=12% Similarity=0.156 Sum_probs=66.9
Q ss_pred cccccccCcchHHHHHHHHHhHhhhc-CCCC-CccCHHHHHHHHHHHcCCCCC-HHHHHHHHHHhhhhccCCcCCCCCCH
Q 010673 42 PLFDHDEQTLKPRCVRALKRIFIICD-HDMD-GALNDAELNEFQVKCFNAPLQ-PAEIVGVKRVVQEKQHDGVNDLGLTL 118 (504)
Q Consensus 42 pl~~~~~~~l~~~~~~~l~~~F~~~D-~d~d-G~l~~~El~~~~~~~~g~~~~-~~e~~~~~~~~~~~~~~~~~~~~i~~ 118 (504)
.|+.+....=-++++..|+++|+.|| +|+| |+|+.+||..+++..+|..++ +++++.|++.+|.+ ++|.|+|
T Consensus 7 ~~~~~~~~~~le~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d-----~dG~Idf 81 (106)
T 2h2k_A 7 SLMAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVN-----QDSELKF 81 (106)
T ss_dssp CTGGGSCCCHHHHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTT-----CSSSEEH
T ss_pred HHhhcccCCcHHHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCC-----CCCCCcH
Confidence 34444443334677899999999999 7997 799999999998876786654 58999999999877 5777999
Q ss_pred HhHHHHHHHHHh
Q 010673 119 SGFLFLHALFIE 130 (504)
Q Consensus 119 ~~Fl~l~~~~~~ 130 (504)
++|+.++.....
T Consensus 82 ~EF~~~~~~~~~ 93 (106)
T 2h2k_A 82 NEYWRLIGELAK 93 (106)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988765543
No 306
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.07 E-value=2.8e-10 Score=89.01 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=67.4
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|++++...++++|..||.|+||.|+.+||..+++ .+|.+++++++..++..++.+ ++|.|++++|+.++..
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~~d~~-----~~g~i~~~eF~~~~~~ 78 (85)
T 2ktg_A 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMR-ALGANPTKQKISEIVKDYDKD-----NSGKFDQETFLTIMLE 78 (85)
T ss_dssp CCSSSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHH-TTSSCCCHHHHHHHHHHHSSS-----SCSEEEHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999977 569999999999999999776 4666999999988765
Q ss_pred HH
Q 010673 128 FI 129 (504)
Q Consensus 128 ~~ 129 (504)
.+
T Consensus 79 ~~ 80 (85)
T 2ktg_A 79 YG 80 (85)
T ss_dssp HS
T ss_pred Hh
Confidence 43
No 307
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.07 E-value=1e-10 Score=102.11 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=75.9
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
..| ++.+..++++|..||+|+||+|+.+||..+++. +|..+++++++.++..++.+ ++|.|++++|+.++...
T Consensus 41 ~~l-~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~g~~~~~~~~~~l~~~~D~d-----~dg~I~~~eF~~~~~~~ 113 (147)
T 1wy9_A 41 EDL-PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSG-----SEETFSYSDFLRMMLGK 113 (147)
T ss_dssp TTH-HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSS-----CTTEECHHHHHHHHCSS
T ss_pred HHH-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHHHh
Confidence 445 788999999999999999999999999999874 69999999999999999776 45669999999876432
Q ss_pred HhcCCchhHHHHHHhhcCCCCccc
Q 010673 129 IEKGRLETTWAVLRKFGYGDDLEL 152 (504)
Q Consensus 129 ~~~~~~e~~~~~~~~f~~d~~~~i 152 (504)
.+++..+|+.||.|++|..
T Consensus 114 -----~~~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 114 -----RSAILRMILMYEEKNKEHK 132 (147)
T ss_dssp -----GGGGGGGGGGCCCC-----
T ss_pred -----HHHHHHHHHHHccCCCCCC
Confidence 5678999999999999875
No 308
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.07 E-value=2.6e-10 Score=102.51 Aligned_cols=84 Identities=10% Similarity=0.013 Sum_probs=73.0
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc----CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCF----NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~----g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
...++++|+.|| |+||+|+.+||..+++ .+ |.++++++++.|+..++ + ++|.|++++|+.++...
T Consensus 75 ~~~l~~aF~~fD-d~~G~I~~~El~~~l~-~l~~~~G~~~~~~~~~~l~~~~d-d-----~dG~I~~~EF~~~~~~~--- 143 (174)
T 2i7a_A 75 LVHYQHVFQKVQ-TSPGVLLSSDLWKAIE-NTDFLRGIFISRELLHLVTLRYS-D-----SVGRVSFPSLVCFLMRL--- 143 (174)
T ss_dssp HHHHHHHHHHHC-SBTTBEEGGGHHHHHH-TCGGGTTCCCCHHHHHHHHHHHS-C-----TTSEECHHHHHHHHHHH---
T ss_pred HHHHHHHHHHhc-CCCCcCCHHHHHHHHH-HhHhccCCCCCHHHHHHHHHHHc-C-----CCCeEcHHHHHHHHHHH---
Confidence 357899999999 9999999999999977 46 99999999999999997 5 46679999999887642
Q ss_pred CCchhHHHHHHhhcCCCCccccC
Q 010673 132 GRLETTWAVLRKFGYGDDLELRD 154 (504)
Q Consensus 132 ~~~e~~~~~~~~f~~d~~~~i~~ 154 (504)
+.+.++|+.||.|++| |+.
T Consensus 144 ---~~~~~~F~~~D~d~~G-I~~ 162 (174)
T 2i7a_A 144 ---EAMAKTFRNLSKDGKG-LYL 162 (174)
T ss_dssp ---HHHHHHHHHHCSSSSC-CCC
T ss_pred ---HHHHHHHHHhCCCCCC-cee
Confidence 5789999999999999 753
No 309
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.07 E-value=9.1e-11 Score=96.35 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=80.7
Q ss_pred cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCC
Q 010673 87 FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSP 165 (504)
Q Consensus 87 ~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~ 165 (504)
++.++++++++.|++.++ ++|.|++++|+.++. ......++++.+|+.||.|++|.|+.++| . .+..-
T Consensus 2 l~~~~t~~e~~~~~~~~d-------~~g~i~~~eF~~~~~--~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~~~- 70 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ-------DPDTFEPQKFFQTSG--LSKMSASQVKDIFRFIDNDQSGYLDGDELKY-FLQKF- 70 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC-------STTCCCHHHHHHHHS--GGGSCHHHHHHHHHHHCTTCSSEECTHHHHT-GGGGT-
T ss_pred ccccCCHHHHHHHHHHcc-------CCCCcCHHHHHHHHh--cCcccHHHHHHHHHHhCCCCCCcCCHHHHHH-HHHHH-
Confidence 577899999999999985 366799999998764 22344578999999999999999999999 6 43111
Q ss_pred CCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 166 DQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 166 ~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
+. .+.. ..+++.++|+.+|.|+||.|+++||..++.
T Consensus 71 ~~---~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 71 QS---DARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CT---TSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred hh---ccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 00 0111 136788999999999999999999998764
No 310
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.06 E-value=4.2e-11 Score=98.60 Aligned_cols=101 Identities=12% Similarity=0.132 Sum_probs=80.7
Q ss_pred cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCC
Q 010673 87 FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSP 165 (504)
Q Consensus 87 ~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~ 165 (504)
+|..+++++++.+++.++. +|.|+|++|+.++.. .....++++.+|+.||.|++|.|+.++| . .+
T Consensus 2 l~~~~s~~ei~~~~~~~d~-------~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~-~l---- 67 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD-------PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKG-VL---- 67 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS-------TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHT-HH----
T ss_pred CCCcCCHHHHHHHHHHhCC-------CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHH-HH----
Confidence 4678999999999999853 557999999987643 2344578999999999999999999998 6 33
Q ss_pred CCcccc---ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 166 DQSVEL---ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 166 ~~~~~l---~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
..+ +... .+++..+|+.+|.|+||.|+++||..++.
T Consensus 68 ---~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 68 ---KGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp ---HHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred ---HHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 122 2222 26789999999999999999999998875
No 311
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=99.06 E-value=6.3e-10 Score=89.74 Aligned_cols=70 Identities=16% Similarity=0.237 Sum_probs=61.8
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+.++..|+++|+.|| +|||| +||.+||..+++.. +|.++++++++.|++.+|.+ ++|.|+|+||+.++.
T Consensus 7 e~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d-----~DG~Idf~EF~~~~~ 81 (98)
T 3n22_A 7 EQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDEN-----SDQQVDFQEYAVFLA 81 (98)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTT-----SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCC-----CCCCCcHHHHHHHHH
Confidence 678899999999998 89995 99999999998864 46789999999999999887 577799999998876
Q ss_pred H
Q 010673 127 L 127 (504)
Q Consensus 127 ~ 127 (504)
.
T Consensus 82 ~ 82 (98)
T 3n22_A 82 L 82 (98)
T ss_dssp H
T ss_pred H
Confidence 4
No 312
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=99.05 E-value=6.5e-10 Score=91.91 Aligned_cols=72 Identities=13% Similarity=0.177 Sum_probs=62.9
Q ss_pred chHHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHH
Q 010673 51 LKPRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFL 124 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l 124 (504)
.+...+..|+++|+.|| +|+|| +|+.+||..+++.. +|.++++++++.|++.+|.+ ++|.|+|++|+.+
T Consensus 16 ~~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~d-----gdG~Idf~EF~~~ 90 (113)
T 2lnk_A 16 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN-----RDNEVDFQEYCVF 90 (113)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSS-----SSSCBCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHH
Confidence 34678899999999999 89998 99999999998753 57789999999999999877 5777999999988
Q ss_pred HHH
Q 010673 125 HAL 127 (504)
Q Consensus 125 ~~~ 127 (504)
+..
T Consensus 91 m~~ 93 (113)
T 2lnk_A 91 LSC 93 (113)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 313
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.05 E-value=3e-10 Score=89.10 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=62.4
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
..+++++...++++|..||+|+||+|+.+||..+++. +| ++++++++.++..++.+ ++|.|++++|+.++..
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 3 AEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKT-LG-SVTPDEVRRMMAEIDTD-----GDGFISFDEFTDFARA 74 (86)
T ss_dssp ---CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHT-TT-TCCHHHHHHHHHHHCTT-----CSSEECHHHHHHHHHH
T ss_pred ccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cC-CCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHH
Confidence 5689999999999999999999999999999999774 68 99999999999999876 4666999999977654
No 314
>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*
Probab=99.05 E-value=4e-10 Score=125.14 Aligned_cols=117 Identities=15% Similarity=0.090 Sum_probs=82.3
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCCCCCC----------------C--CCCccceEEEEEEE------------cCCC
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERPFSEN----------------Y--APTTGEQYAVNVVD------------QPGG 331 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~----------------~--~~T~~~~~~~~~v~------------~~~~ 331 (504)
.+..+|+|+|++|+|||||+++|+....... . ..|+........+. .++.
T Consensus 17 ~~~rnI~IiG~~~~GKTTL~~~Ll~~~g~i~~~~~~~~~~~D~~~~E~~rgiTI~~~~~~~~~~~~~~~~~~i~~~~~~~ 96 (842)
T 1n0u_A 17 TNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGN 96 (842)
T ss_dssp GGEEEEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHHHCSSCCCSS
T ss_pred ccccEEEEECCCCCCHHHHHHHHHHhcCCcccccCCCceeecCchhhhhcceeEeeceeEEEecccccccccccccccCC
Confidence 4568999999999999999999986421110 0 01222222222232 1223
Q ss_pred cEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCC
Q 010673 332 NKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLK 407 (504)
Q Consensus 332 ~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~ 407 (504)
...+.+||++|+..+.... ..+++.+|++|+|+|+++..+++....|.. +... ++|+++|+||+|+.
T Consensus 97 ~~~i~liDTPG~~df~~~~--~~~l~~aD~ailVvDa~~g~~~qt~~~~~~-~~~~------~~p~ilviNK~D~~ 163 (842)
T 1n0u_A 97 SFLINLIDSPGHVDFSSEV--TAALRVTDGALVVVDTIEGVCVQTETVLRQ-ALGE------RIKPVVVINKVDRA 163 (842)
T ss_dssp EEEEEEECCCCCCSSCHHH--HHHHHTCSEEEEEEETTTBSCHHHHHHHHH-HHHT------TCEEEEEEECHHHH
T ss_pred CceEEEEECcCchhhHHHH--HHHHHhCCEEEEEEeCCCCCCHHHHHHHHH-HHHc------CCCeEEEEECCCcc
Confidence 4667789999998776554 558899999999999999988887655543 3332 78999999999986
No 315
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.04 E-value=3.1e-10 Score=103.47 Aligned_cols=122 Identities=16% Similarity=0.073 Sum_probs=92.5
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchh
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLET 136 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~ 136 (504)
..+.++|..+|.|+||.|+.+|+..++.. .+++..+.+.+|.+ ++|.|+.++|..+....-..-..++
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------~~~~~~~F~~~D~d-----~~G~i~~~e~~~~l~~~g~~~~~~~ 130 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSS-----GDGRLDSNEVRAALLSSGYQVSEQT 130 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTT-----SSSCBCHHHHHHHHHTTSCCCCHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHH-------HHHHHHHHHHhCCC-----CCCeEcHHHHHHHHHHhCCCCCHHH
Confidence 34667899999999999999999877654 26777788888766 4667999999876654322234467
Q ss_pred HHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCC--CCHHHHhhhh
Q 010673 137 TWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGA--VRPAELEDLF 203 (504)
Q Consensus 137 ~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~--l~~~e~~~l~ 203 (504)
+..+|+.+|.|++|.|+.+++ . .+ . ....+.++|+.+|+|+||. ++++||..++
T Consensus 131 ~~~~~~~~D~d~dg~i~~~eF~~-~~----------~--~~~~~~~~F~~~D~d~dG~i~~~~~eF~~~~ 187 (191)
T 1y1x_A 131 FQALMRKFDRQRRGSLGFDDYVE-LS----------I--FVCRVRNVFAFYDRERTGQVTFTFDTFIGGS 187 (191)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHH-HH----------H--HHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHH-HH----------H--HHHHHHHHHHHhCcCCCceEEeeHHHHHHHH
Confidence 889999999999999988777 4 11 1 1256788999999999999 6788887664
No 316
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=99.04 E-value=7.1e-10 Score=88.54 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=59.8
Q ss_pred HHHHHHHHHhHhhhc-CCCC-CccCHHHHHHHHHHHcC----CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMD-GALNDAELNEFQVKCFN----APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~d-G~l~~~El~~~~~~~~g----~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+.++..|+++|+.|| +||| |+||.+||..+++..+| .++++++++.|++.+|.+ ++|.|+|+||+.++.
T Consensus 6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d-----~DG~Idf~EF~~~~~ 80 (93)
T 4eto_A 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN-----RDNEVDFQEYCVFLS 80 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTT-----SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCC-----CCCCCcHHHHHHHHH
Confidence 677899999999998 6885 89999999999886565 467899999999999887 577799999998876
Q ss_pred H
Q 010673 127 L 127 (504)
Q Consensus 127 ~ 127 (504)
.
T Consensus 81 ~ 81 (93)
T 4eto_A 81 C 81 (93)
T ss_dssp H
T ss_pred H
Confidence 4
No 317
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=99.04 E-value=1.2e-09 Score=104.53 Aligned_cols=111 Identities=11% Similarity=-0.016 Sum_probs=69.0
Q ss_pred EEEEEEecCChhhHhhhhh----hhhhcccccEEEEEEeCCCcccHHHHHHHH----HHHHHhccCCCCCCcEEEEEECC
Q 010673 333 KKTLILQEIPEEGVKKILS----NKEALASCDVTIFVYDSSDEYSWKRTKELL----VEVARLGEDSGYGVPCLLIASKD 404 (504)
Q Consensus 333 ~~~li~d~~g~~~~~~~~~----~~~~~~~ad~iilV~D~s~~~s~~~~~~~~----~~l~~~~~~~~~~~piilV~NK~ 404 (504)
..+++||++|......... ....+.. +++++|+|++...+........ ..... .+.|+++|+||+
T Consensus 109 ~d~iiiDtpG~~~~~~~~~l~~~~~~~~~~-~~iv~vvD~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~iv~NK~ 181 (262)
T 1yrb_A 109 NDYVLIDTPGQMETFLFHEFGVRLMENLPY-PLVVYISDPEILKKPNDYCFVRFFALLIDLR------LGATTIPALNKV 181 (262)
T ss_dssp CSEEEEECCSSHHHHHHSHHHHHHHHTSSS-CEEEEEECGGGCCSHHHHHHHHHHHHHHHHH------HTSCEEEEECCG
T ss_pred CCEEEEeCCCccchhhhhhhHHHHHHHHhh-ceEEeccchhhhcCHHHHHHHHHHHHHHhcc------cCCCeEEEEecc
Confidence 3678899999865432211 0124466 8999999987554433322211 11111 268999999999
Q ss_pred CCCCCccchH---H---HH----H-----------------HHHHhCCC-CeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 405 DLKPYTMAVQ---D---SA----R-----------------VTQELGIE-PPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 405 Dl~~~~~~~~---~---~~----~-----------------~~~~~~~~-~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
|+....+..+ . .. . +++.++.. +++++||++ .|+++++++|.+.+.
T Consensus 182 D~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SA~~~~gi~~l~~~i~~~~~ 256 (262)
T 1yrb_A 182 DLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLAYEHYC 256 (262)
T ss_dssp GGCCHHHHHHHHHHHHCHHHHHHHHHHCCSHHHHHHHHHHHHHHHHSCCCCCEECCTTTCTTHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHhChHHHHHHHhccccccchhHhHHHHHHHHhcCcccceEEEecCcccHHHHHHHHHHHhc
Confidence 9876432111 0 00 1 12444432 589999999 999999999988764
No 318
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=99.04 E-value=7.9e-10 Score=90.09 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=61.0
Q ss_pred HHHHHHHHHhHhhhc-CCCC-CccCHHHHHHHHHHHcC----CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMD-GALNDAELNEFQVKCFN----APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~d-G~l~~~El~~~~~~~~g----~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+.++..|++||+.|| +||| |+|+.+||..+++..+| .++++++++.|++.+|.+ ++|.|+|+||+.++.
T Consensus 9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d-----gDG~Idf~EF~~~m~ 83 (104)
T 3zwh_A 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSN-----RDNEVDFQEYCVFLS 83 (104)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCC-----CCCCCcHHHHHHHHH
Confidence 678899999999998 7886 89999999999886555 567899999999999887 577799999998875
Q ss_pred H
Q 010673 127 L 127 (504)
Q Consensus 127 ~ 127 (504)
.
T Consensus 84 ~ 84 (104)
T 3zwh_A 84 S 84 (104)
T ss_dssp H
T ss_pred H
Confidence 4
No 319
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.03 E-value=4.6e-10 Score=89.52 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=61.7
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
.++++++..++++|+.||+|+||+|+.+||..+++.. | ++++++..|++.++.+ ++|.|++++|+.++..
T Consensus 2 ~ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g--~~~~~~~~i~~~~D~d-----~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-K--LPILELSHIWELSDFD-----KDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-S--SCHHHHHHHHHHHCTT-----CSSEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C--CCHHHHHHHHHHHCCC-----CCCCCCHHHHHHHHHH
Confidence 4788999999999999999999999999999998764 6 7899999999999776 4666999999977754
No 320
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.03 E-value=4.3e-10 Score=86.04 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=64.8
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
|+++....++++|..||+|+||.|+.+||..+++. +|.+++++++..++..++.+ ++|.|++++|+.++...+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~~-----~~g~i~~~eF~~~~~~~~ 73 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDRE-----GNGYIGFDDFLDIMTEKI 73 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCHHHHHHHHHHHHCCS-----SSSEEEHHHHHHHHTHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCC-----CCCcCcHHHHHHHHHHHh
Confidence 57889999999999999999999999999999875 59999999999999999776 466699999998876544
No 321
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.02 E-value=7.4e-10 Score=87.71 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=67.5
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|+++.+..++++|..||+|+||.|+.+||..+++. +|.+++++++..++..++.+ ++|.|++++|+.++..
T Consensus 11 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~D~~-----~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEVDED-----GSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTT-----CCSSEEHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCeEeHHHHHHHHHH
Confidence 34689999999999999999999999999999999874 69999999999999999876 4667999999988765
Q ss_pred HH
Q 010673 128 FI 129 (504)
Q Consensus 128 ~~ 129 (504)
.+
T Consensus 85 ~~ 86 (90)
T 1avs_A 85 QM 86 (90)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 322
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.02 E-value=1.3e-09 Score=97.17 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=77.6
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
...++++|+.||+|+||.|+.+|+..++.. +|.++++++++.++..++.+ ++|.|++++|+.++... +
T Consensus 73 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~~~------~ 140 (172)
T 2znd_A 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSG-FGYRLSDQFHDILIRKFDRQ-----GRGQIAFDDFIQGCIVL------Q 140 (172)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHCCCCCCccCHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHH------H
Confidence 357899999999999999999999999875 69999999999999999876 46779999999877643 5
Q ss_pred hHHHHHHhhcCCCCccccCC
Q 010673 136 TTWAVLRKFGYGDDLELRDD 155 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~ 155 (504)
.+..+|+.+|.|++|.|+.+
T Consensus 141 ~~~~~F~~~D~d~dG~i~~~ 160 (172)
T 2znd_A 141 RLTDIFRRYDTDQDGWIQVS 160 (172)
T ss_dssp HHHHHHHHHCTTSSSCCCCC
T ss_pred HHHHHHHHhCCCCCCeEeee
Confidence 79999999999999999754
No 323
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.02 E-value=3.9e-10 Score=102.50 Aligned_cols=117 Identities=11% Similarity=0.041 Sum_probs=87.6
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cC----
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KG---- 132 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~---- 132 (504)
.++++|..+|.|+||.|+.+|+..++.. ++...+++++..+++.+|.+ ++|.|++++|..++..... .|
T Consensus 64 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d-----~~G~I~~~E~~~~~~~~~~~~g~~~~ 137 (193)
T 1bjf_A 64 FAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLD-----GNGYISKAEMLEIVQAIYKMVSSVMK 137 (193)
T ss_dssp HHHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTT-----CSSCEEHHHHHHHHHHHHTTCCCTTT
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCHHHHHHHHHhhcCCC-----CCCeECHHHHHHHHHHHHHHhccccC
Confidence 4688999999999999999999998774 47788899999999999877 5777999999988765432 12
Q ss_pred -C------chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCC
Q 010673 133 -R------LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAV 194 (504)
Q Consensus 133 -~------~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l 194 (504)
. .+.+..+|+.+|.|++|.|+.+++ . .+. ....+.++| .+|.|+||.|
T Consensus 138 ~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~-~~~------------~~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 138 MPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR-GAK------------SDPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp SCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHH-HHH------------HCTHHHHTT-CC--------
T ss_pred CCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHH-HHh------------cCHHHHHHh-ccCCCCCCCC
Confidence 1 134899999999999999998888 5 220 115688999 9999999986
No 324
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=99.01 E-value=9.4e-10 Score=91.32 Aligned_cols=88 Identities=15% Similarity=0.120 Sum_probs=64.7
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHHcCCC-----CCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKCFNAP-----LQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~~g~~-----~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
++++..|+++|+.|| +|+|| +|+.+||..+++..+|.. +++++++.|++.++.+ ++|.|+|++|+.++
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d-----~dG~I~f~EF~~~~ 82 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTN-----ADKQLSFEEFIMLM 82 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCC-----CCCCEeHHHHHHHH
Confidence 566889999999999 59999 999999999988667853 6899999999999877 57779999999888
Q ss_pred HHHHhcCCchhHHHHHHhhcCCCCcc
Q 010673 126 ALFIEKGRLETTWAVLRKFGYGDDLE 151 (504)
Q Consensus 126 ~~~~~~~~~e~~~~~~~~f~~d~~~~ 151 (504)
.... ..+...|+..+ +++|.
T Consensus 83 ~~~~-----~~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 83 ARLT-----WASHEKMHEGD-EGPGH 102 (113)
T ss_dssp HHHH-----HHHHC------------
T ss_pred HHHH-----HHHHHHHhhCC-CCCcc
Confidence 6543 24666777777 76663
No 325
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=99.01 E-value=6.5e-10 Score=87.18 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=65.3
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHH---HHHHHHHhhhhccCCcCCCCCCHHhHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAE---IVGVKRVVQEKQHDGVNDLGLTLSGFLFL 124 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e---~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l 124 (504)
...|+++++..++++|..||.|+||+|+.+||..+++ .+|.++++++ +..++..++.+ ++|.|++ +|+.+
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~-eF~~~ 77 (86)
T 1j7q_A 5 ARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLT-KLGQTYTKRETEAIMKEARGPKGD-----KKNIGPE-EWLTL 77 (86)
T ss_dssp CCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHH-HTSCCCSHHHHHHHHHHHHCSSCS-----SCCBCTT-HHHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHhCCC-----CCCcCCH-HHHHH
Confidence 4568888999999999999999999999999999977 4699999999 99999888665 4666999 99988
Q ss_pred HHHHH
Q 010673 125 HALFI 129 (504)
Q Consensus 125 ~~~~~ 129 (504)
+...+
T Consensus 78 ~~~~~ 82 (86)
T 1j7q_A 78 CSKWV 82 (86)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 326
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.00 E-value=4.4e-11 Score=98.39 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=80.4
Q ss_pred cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCC
Q 010673 87 FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSP 165 (504)
Q Consensus 87 ~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~ 165 (504)
+|..+|++|++.+++.++ ++|.|+|++|+.++.. .....+.++.+|+.||.|++|.|+.++| . .+.
T Consensus 2 lg~~~t~~e~~~~~~~~d-------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~--- 68 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT-------AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGS-ILK--- 68 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC-------STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHT-HHH---
T ss_pred CCCcCCHHHHHHHHHHcC-------CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHH-HHH---
Confidence 477899999999999885 3667999999987642 2345578999999999999999999999 6 331
Q ss_pred CCcccc---Chh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 166 DQSVEL---ASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 166 ~~~~~l---~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.+ +.. ..+++..+|+.+|.|+||.|+++||..++.
T Consensus 69 ----~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 69 ----GFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp ----HHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred ----HHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 11 111 136788999999999999999999998875
No 327
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.00 E-value=7e-11 Score=97.03 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=79.7
Q ss_pred cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCC
Q 010673 87 FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSP 165 (504)
Q Consensus 87 ~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~ 165 (504)
+|..++++|++.|++.++ ++|.|+|++|+.++.. .....++++.+|+.||.|++|.|+.++| . .+.
T Consensus 2 l~~~~~~~e~~~l~~~~d-------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l~--- 68 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ-------APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKY-FLQ--- 68 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC-------STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTT-SHH---
T ss_pred ccccCCHHHHHHHHHHcC-------CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHH-HHH---
Confidence 578899999999998875 3667999999987642 2344578999999999999999999999 6 331
Q ss_pred CCcccc---ChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 166 DQSVEL---ASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 166 ~~~~~l---~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.+ +... .+++..+|+.+|.|+||.|+++||..++.
T Consensus 69 ----~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 69 ----RFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp ----HHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred ----HHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 11 1111 15578999999999999999999998764
No 328
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.00 E-value=5.2e-10 Score=89.81 Aligned_cols=70 Identities=23% Similarity=0.315 Sum_probs=61.4
Q ss_pred cchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 50 TLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 50 ~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
.+++++++.++++|+.||+|+||+|+.+||..+++. +| +++++++.+++.++.+ ++|.|++++|+.++..
T Consensus 3 ~ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d-----~dG~i~~~EF~~~~~~ 72 (95)
T 1c07_A 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTK-----DCGKLSKDQFALAFHL 72 (95)
T ss_dssp SSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTT-----CSSSEETTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-cC--CCHHHHHHHHHHHCCC-----CCCcCCHHHHHHHHHH
Confidence 468889999999999999999999999999999875 35 7899999999999876 4677999999977654
No 329
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.99 E-value=1.7e-09 Score=87.49 Aligned_cols=72 Identities=13% Similarity=0.120 Sum_probs=62.0
Q ss_pred HHHHHHHHHhHhhhcCCC---CCccCHHHHHHHHHHHcCCCCC----HHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 53 PRCVRALKRIFIICDHDM---DGALNDAELNEFQVKCFNAPLQ----PAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~---dG~l~~~El~~~~~~~~g~~~~----~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
+.++..|+++|+.||+|+ ||+|+.+||..+++..+|..++ +++++.|++.+|.+ ++|.|+|+||+.++
T Consensus 7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d-----~DG~Idf~EF~~~m 81 (100)
T 3nxa_A 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDAN-----HDGRISFDEYWTLI 81 (100)
T ss_dssp HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCC-----SSCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCC-----CCCCCcHHHHHHHH
Confidence 677899999999999974 7999999999999887776665 78999999999887 57779999999888
Q ss_pred HHHH
Q 010673 126 ALFI 129 (504)
Q Consensus 126 ~~~~ 129 (504)
....
T Consensus 82 ~~~~ 85 (100)
T 3nxa_A 82 GGIT 85 (100)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 330
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.97 E-value=1e-09 Score=90.78 Aligned_cols=72 Identities=18% Similarity=0.271 Sum_probs=63.9
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...+++++...++++|..||+|+||+|+.+||..+++ |..++++++..|++.++.+ ++|.|+|++|+.++..
T Consensus 5 ~w~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~D~d-----~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 5 EWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLSDID-----QDGKLTAEEFILAMHL 76 (111)
T ss_dssp CSSSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHHCSS-----CCSEEEHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHHCCC-----CCCCCcHHHHHHHHHH
Confidence 4557899999999999999999999999999999877 7889999999999999776 4666999999977754
No 331
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=98.97 E-value=1.3e-09 Score=97.40 Aligned_cols=86 Identities=10% Similarity=0.138 Sum_probs=76.0
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchh
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLET 136 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~ 136 (504)
..++++|+.||+|+||.|+.+||..++.. +|.++++++++.++..++ + ++|.|++++|+.++... +.
T Consensus 77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d-d-----~dg~i~~~eF~~~~~~~------~~ 143 (173)
T 1alv_A 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEA-AGFHLNEHLYSMIIRRYS-D-----EGGNMDFDNFISCLVRL------DA 143 (173)
T ss_dssp HHHHHHHHHHCTTCCSSBCTTTHHHHHHH-HTCCCCHHHHHHHHHHHT-C-----SSSCBCHHHHHHHHHHH------HH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH-cCCCCCHHHHHHHHHHhc-C-----CCCcCcHHHHHHHHHHH------HH
Confidence 46889999999999999999999999875 599999999999999986 4 46779999999877642 57
Q ss_pred HHHHHHhhcCCCCccccCC
Q 010673 137 TWAVLRKFGYGDDLELRDD 155 (504)
Q Consensus 137 ~~~~~~~f~~d~~~~i~~~ 155 (504)
+..+|+.||.|++|.|+.+
T Consensus 144 ~~~~F~~~D~d~~G~i~~~ 162 (173)
T 1alv_A 144 MFRAFKSLDKDGTGQIQVN 162 (173)
T ss_dssp HHHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHhCCCCCCeecHh
Confidence 9999999999999999865
No 332
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=98.97 E-value=1.4e-09 Score=96.28 Aligned_cols=87 Identities=14% Similarity=0.121 Sum_probs=76.5
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
...++++|+.||+|+||.|+.+||..++.. +|.++++++++.++..+ + ++|.|++++|+.++... +
T Consensus 69 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~--d-----~dg~i~~~eF~~~~~~~------~ 134 (165)
T 1k94_A 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGL-MGYRLSPQTLTTIVKRY--S-----KNGRIFFDDYVACCVKL------R 134 (165)
T ss_dssp HHHHHHHHHHHCTTCCSBCCHHHHHHHHHH-TTCCCCHHHHHHHHHHH--C-----BTTBCBHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHhCCCCCceECHHHHHHHHHH-hCCCCCHHHHHHHHHHh--C-----CCCeEcHHHHHHHHHHH------H
Confidence 367899999999999999999999999874 69999999999999998 3 36679999999877653 6
Q ss_pred hHHHHHHhhcCCCCccccCCCC
Q 010673 136 TTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~~l 157 (504)
++..+|+.||.|++|.|+.+ +
T Consensus 135 ~~~~~F~~~D~d~~G~i~~~-~ 155 (165)
T 1k94_A 135 ALTDFFRKRDHLQQGSANFI-Y 155 (165)
T ss_dssp HHHHHHHTTCTTCCSEEEEE-H
T ss_pred HHHHHHHHhCCCCCCeEeee-H
Confidence 79999999999999999866 5
No 333
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=98.96 E-value=6.4e-09 Score=109.94 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=78.0
Q ss_pred eEEEEEEcCCCchhhHHHHHHhcCCCC-----------------CCC------CC-CccceEEEEEEEcCCCcEEEEEEe
Q 010673 284 VFRCLLFGPQNAGKSALLNSFLERPFS-----------------ENY------AP-TTGEQYAVNVVDQPGGNKKTLILQ 339 (504)
Q Consensus 284 ~~kI~vvG~~~vGKSSLin~l~~~~~~-----------------~~~------~~-T~~~~~~~~~v~~~~~~~~~li~d 339 (504)
.-+|+|+|..++|||||..+|+...-. ..+ .+ |+.. ....+.+. ...+.++|
T Consensus 31 ~RNiaIiaHvdaGKTTLtE~lL~~tG~i~~~G~V~~~~~~~~~~~D~~~~EreRGITI~s--~~~~~~~~--~~~iNlID 106 (548)
T 3vqt_A 31 RRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMAMERERGISVTT--SVMQFPYR--DRVVNLLD 106 (548)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHHTTCHHHHHHHHHC--------------------CTT--TEEEEEET--TEEEEEEC
T ss_pred cceEEEEeCCCCCHHHHHHHHHHhcCcccccceeecCccccccccCChHHHHHCCCcEee--ceEEEEEC--CEEEEEEe
Confidence 347999999999999999999622110 000 00 2222 12234554 37788999
Q ss_pred cCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 340 EIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 340 ~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
+||+..|..-. ...++-+|++|+|+|+...-.-+....| +.+.++ ++|+++++||+|....
T Consensus 107 TPGHvDF~~Ev--~raL~~~DgAvlVvda~~GV~~qT~~v~-~~a~~~------~lp~i~fINK~Dr~~a 167 (548)
T 3vqt_A 107 TPGHQDFSEDT--YRVLTAVDSALVVIDAAKGVEAQTRKLM-DVCRMR------ATPVMTFVNKMDREAL 167 (548)
T ss_dssp CCCGGGCSHHH--HHHHHSCSEEEEEEETTTBSCHHHHHHH-HHHHHT------TCCEEEEEECTTSCCC
T ss_pred CCCcHHHHHHH--HHHHHhcCceEEEeecCCCcccccHHHH-HHHHHh------CCceEEEEecccchhc
Confidence 99998774333 4578899999999999988666654444 555555 8999999999998653
No 334
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.95 E-value=2.4e-09 Score=86.54 Aligned_cols=71 Identities=18% Similarity=0.239 Sum_probs=61.7
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
++++..|+++|+.|| +|+|| +|+.+||..+++.. +|.++++++++.|++.++.+ ++|.|+|++|+.++.
T Consensus 6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d-----~dG~I~f~EF~~~~~ 80 (99)
T 2y5i_A 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSN-----KDNEVDFNEFVVLVA 80 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCC-----CCCcCcHHHHHHHHH
Confidence 567889999999998 89998 99999999998764 57789999999999999887 577799999998776
Q ss_pred HH
Q 010673 127 LF 128 (504)
Q Consensus 127 ~~ 128 (504)
..
T Consensus 81 ~~ 82 (99)
T 2y5i_A 81 AL 82 (99)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 335
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.93 E-value=2e-09 Score=86.38 Aligned_cols=70 Identities=13% Similarity=0.182 Sum_probs=55.8
Q ss_pred HHHHHHHHHhHhhhc-CCCC-CccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMD-GALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~d-G~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
++++..|+++|+.|| +|+| |+|+.+||..+++.. +|.++++++++.|++.++.+ ++|.|+|++|+.++.
T Consensus 5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d-----~dG~I~f~EF~~~~~ 79 (95)
T 1j55_A 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN-----GDAQVDFSEFIVFVA 79 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSS-----SSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHH
Confidence 567889999999999 7995 899999999998865 46788999999999999877 577799999998876
Q ss_pred H
Q 010673 127 L 127 (504)
Q Consensus 127 ~ 127 (504)
.
T Consensus 80 ~ 80 (95)
T 1j55_A 80 A 80 (95)
T ss_dssp H
T ss_pred H
Confidence 4
No 336
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=98.92 E-value=2e-09 Score=95.49 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=75.2
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchh
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLET 136 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~ 136 (504)
..++++|+.||.|+||.|+.+||..++. .+|.++++++++.++..+ + ++|.|++++|+.++... +.
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~~--d-----~dg~i~~~eF~~~~~~~------~~ 137 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALT-TMGFRLNPQTVNSIAKRY--S-----TSGKITFDDYIACCVKL------RA 137 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHH-TTTCCCCHHHHHHHHHHT--C-----BTTBEEHHHHHHHHHHH------HH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHh--C-----cCCcCcHHHHHHHHHHH------HH
Confidence 5789999999999999999999999977 569999999999999998 3 36679999999877653 57
Q ss_pred HHHHHHhhcCCCCccccCC
Q 010673 137 TWAVLRKFGYGDDLELRDD 155 (504)
Q Consensus 137 ~~~~~~~f~~d~~~~i~~~ 155 (504)
+..+|+.+|.|++|.|+.+
T Consensus 138 ~~~~F~~~D~d~~G~i~~~ 156 (167)
T 1gjy_A 138 LTDSFRRRDSAQQGMVNFS 156 (167)
T ss_dssp HHHHHHHHCTTCCSEEEEE
T ss_pred HHHHHHHhCCCCCeeEEee
Confidence 9999999999999999865
No 337
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.91 E-value=1.9e-09 Score=85.68 Aligned_cols=72 Identities=18% Similarity=0.277 Sum_probs=63.2
Q ss_pred cCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 48 EQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 48 ~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...|+++....++++|..||.|+||.|+.+||..+++. +| +++++++.++..++.+ ++|.|++++|+.++..
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~~~~D~d-----~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEAVFQRLDAD-----RDGAITFQEFARGFLG 89 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCTT-----CSSEECHHHHTHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-cC--cCHHHHHHHHHHhCCC-----CCCCEeHHHHHHHHHH
Confidence 57789999999999999999999999999999999775 57 7999999999999876 4666999999977654
No 338
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.90 E-value=3.8e-09 Score=86.39 Aligned_cols=70 Identities=17% Similarity=0.123 Sum_probs=61.6
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
..++++++..++++|+.||+ +||+|+.+||..++++ +| ++++++..|++.+|.+ ++|.|+|+||+.++..
T Consensus 7 w~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d-----~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 7 WAVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDID-----HDGMLDRDEFAVAMFL 76 (106)
T ss_dssp CSSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHT-TT--CCHHHHHHHHHHHCSS-----CSSBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCC-----CCCcCcHHHHHHHHHH
Confidence 45789999999999999999 9999999999999875 45 8899999999999877 4677999999977654
No 339
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.90 E-value=4.6e-10 Score=92.64 Aligned_cols=77 Identities=16% Similarity=0.115 Sum_probs=64.1
Q ss_pred ccccccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHH
Q 010673 43 LFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122 (504)
Q Consensus 43 l~~~~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl 122 (504)
=+......++++++..++++|+.||+|+||+|+.+||..+++. +| +++++++.|++.++.+ ++|.|+|+||+
T Consensus 8 ~~~~~~~~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d-----~dG~I~~~EF~ 79 (110)
T 1iq3_A 8 SYPDEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-SK--LSIPELSYIWELSDAD-----CDGALTLPEFC 79 (110)
T ss_dssp CCCCSSCCCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-SS--CSSCCHHHHHHHHCSS-----SCSEEEHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCC-----CCCcCcHHHHH
Confidence 3444455688889999999999999999999999999988763 34 7899999999999776 46669999999
Q ss_pred HHHHH
Q 010673 123 FLHAL 127 (504)
Q Consensus 123 ~l~~~ 127 (504)
.++..
T Consensus 80 ~~m~~ 84 (110)
T 1iq3_A 80 AAFHL 84 (110)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 340
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=98.89 E-value=4e-09 Score=104.94 Aligned_cols=154 Identities=12% Similarity=0.118 Sum_probs=88.8
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhc------CCCCCCC-CC-Ccc------------------ceEEEEEEE-------
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLE------RPFSENY-AP-TTG------------------EQYAVNVVD------- 327 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~------~~~~~~~-~~-T~~------------------~~~~~~~v~------- 327 (504)
......++|+|++|||||||++.+.+ ....... .+ +.. .........
T Consensus 52 ~~~g~~v~i~G~~GaGKSTLl~~l~g~~~~~~g~v~i~~~d~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~G 131 (337)
T 2qm8_A 52 TGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGG 131 (337)
T ss_dssp CCCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSSCCCSSCCGGGSTTGGGCTTEEEECCCCCSSHHH
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHHHhhhhCCCEEEEEEEcCcccccccchHHHhhhheeeccCcccccccCcccccccc
Confidence 45677899999999999999999983 3221100 00 000 001110000
Q ss_pred -----------cCCCcEEEEEEecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCc
Q 010673 328 -----------QPGGNKKTLILQEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVP 396 (504)
Q Consensus 328 -----------~~~~~~~~li~d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~p 396 (504)
+..+...++++|++|..... ......+|++++|+|.+..+..+.+.. .+. ..|
T Consensus 132 ~tr~~~e~~~~~~~~~~~~iliDT~Gi~~~~-----~~v~~~~d~vl~v~d~~~~~~~~~i~~---~i~--------~~~ 195 (337)
T 2qm8_A 132 VAAKTRETMLLCEAAGFDVILVETVGVGQSE-----TAVADLTDFFLVLMLPGAGDELQGIKK---GIF--------ELA 195 (337)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSSSCH-----HHHHTTSSEEEEEECSCC------CCT---THH--------HHC
T ss_pred hHHHHHHHHHHHhcCCCCEEEEECCCCCcch-----hhHHhhCCEEEEEEcCCCcccHHHHHH---HHh--------ccc
Confidence 00012567788999863221 123468999999999875432211111 111 346
Q ss_pred EEEEEECCCCCCCccchH-HHHHHHHHh---C------CCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 397 CLLIASKDDLKPYTMAVQ-DSARVTQEL---G------IEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 397 iilV~NK~Dl~~~~~~~~-~~~~~~~~~---~------~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
.++|+||+|+........ ..+++.... . .++++.+||++ .|++++++.|.+...
T Consensus 196 ~ivvlNK~Dl~~~~~~s~~~~~~l~~a~~l~~~~~~~~~~~vl~~Sal~g~gi~~L~~~I~~~~~ 260 (337)
T 2qm8_A 196 DMIAVNKADDGDGERRASAAASEYRAALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRS 260 (337)
T ss_dssp SEEEEECCSTTCCHHHHHHHHHHHHHHHTTBCCSBTTBCCCEEEEBTTTTBSHHHHHHHHHHHHH
T ss_pred cEEEEEchhccCchhHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 688889999765332222 334444332 1 24579999999 999999999988764
No 341
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.88 E-value=1.2e-09 Score=87.68 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=61.1
Q ss_pred hHHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 52 KPRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
.++++..|+++|+.|| +|+|| +|+.+||..+++.. +|.++++++++.|++.++.+ ++|.|+|++|+.++
T Consensus 7 ~e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d-----~dG~I~f~EF~~~~ 81 (95)
T 2wcb_A 7 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN-----QDEQVDFQEFISLV 81 (95)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSS-----TTSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCC-----CCCcCcHHHHHHHH
Confidence 3667889999999999 89998 99999999998753 46789999999999999776 46669999999877
Q ss_pred HH
Q 010673 126 AL 127 (504)
Q Consensus 126 ~~ 127 (504)
..
T Consensus 82 ~~ 83 (95)
T 2wcb_A 82 AI 83 (95)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 342
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=98.86 E-value=1.7e-09 Score=98.04 Aligned_cols=153 Identities=18% Similarity=0.150 Sum_probs=110.4
Q ss_pred CCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCC-chhHHHHHHhhcCC
Q 010673 69 DMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGR-LETTWAVLRKFGYG 147 (504)
Q Consensus 69 d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~-~e~~~~~~~~f~~d 147 (504)
+..|.|+.+|+..+++. + .++.+++..+...++.+. ++|.|++++|..++........ .+.+..+|+.+|.|
T Consensus 3 ~~~~~l~~~el~~~~~~-~--~~~~~el~~~f~~~D~~~----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d 75 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRS-T--RFDKKELQQWYKGFFKDC----PSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDAD 75 (190)
T ss_dssp CSSCCSCHHHHHHHHHH-H--CSCSHHHHHHHHHHHHHS----CCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSS
T ss_pred cccccCCHHHHHHHHHh-c--CCCHHHHHHHHHHHHHhC----CCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCC
Confidence 46899999999999775 4 469999999999998762 2556999999988776533222 35688999999999
Q ss_pred CCccccCCCC-CCCCCCCCCCccccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC-------CCCCCCC----C
Q 010673 148 DDLELRDDFL-PVPTKLSPDQSVELAS-EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA-------PESPWDE----A 214 (504)
Q Consensus 148 ~~~~i~~~~l-~~~~~~~~~~~~~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~-------p~~p~~~----~ 214 (504)
++|.|+.+++ . .+. .++. ...+.+..+|+.+|.|++|.|+++||..++... +..|... .
T Consensus 76 ~~G~i~~~ef~~-~~~-------~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~ 147 (190)
T 2l2e_A 76 KNGYIDFKEFIC-ALS-------VTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEK 147 (190)
T ss_dssp STTCEEHHHHHH-HHT-------TSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHH
T ss_pred CCCeEeHHHHHH-HHH-------HHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHH
Confidence 9999999888 5 331 1111 123678899999999999999999999887651 1111110 0
Q ss_pred ---ccccccccccCCcccHHHHHHh
Q 010673 215 ---PYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 215 ---~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
........+..|.|++..|+..
T Consensus 148 ~~~~~f~~~D~d~dG~I~~~Ef~~~ 172 (190)
T 2l2e_A 148 RVNKIFNMMDKNKDGQLTLEEFCEG 172 (190)
T ss_dssp HHHHHHHHHTCCSSCCBCHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 1123344567889999888654
No 343
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=98.86 E-value=6.5e-09 Score=95.03 Aligned_cols=86 Identities=13% Similarity=0.195 Sum_probs=75.3
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCch
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLE 135 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e 135 (504)
...++++|+.||+|+||.|+.+||..++. .+|.++++++++.++..+ + ++|.|++++|+.++... +
T Consensus 102 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~l~~~~--d-----~dg~i~~~eF~~~~~~~------~ 167 (198)
T 1juo_A 102 LNGWRQHFISFDTDRSGTVDPQELQKALT-TMGFRLSPQAVNSIAKRY--S-----TNGKITFDDYIACCVKL------R 167 (198)
T ss_dssp HHHHHHHHHTTCTTCCSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHT--C-----SSSSEEHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHh--C-----CCCeEcHHHHHHHHHHH------H
Confidence 36788999999999999999999999987 469999999999999998 3 46779999999877653 5
Q ss_pred hHHHHHHhhcCCCCccccCC
Q 010673 136 TTWAVLRKFGYGDDLELRDD 155 (504)
Q Consensus 136 ~~~~~~~~f~~d~~~~i~~~ 155 (504)
.+.++|+.||.|++|.|+.+
T Consensus 168 ~~~~~F~~~D~d~~G~is~~ 187 (198)
T 1juo_A 168 ALTDSFRRRDTAQQGVVNFP 187 (198)
T ss_dssp HHHHHHHHTCTTCCSEEEEE
T ss_pred HHHHHHHHhCCCCCCeEeec
Confidence 78999999999999999864
No 344
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=98.85 E-value=2.2e-09 Score=100.21 Aligned_cols=121 Identities=12% Similarity=-0.025 Sum_probs=87.3
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
.++++|+.+|.|+||.|+.+|+..++... +++..+.+.+|.+ ++|.|+.++|..+....-..-..+++
T Consensus 88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-------~~l~~~F~~~D~d-----~~G~I~~~El~~~l~~~g~~~~~~~~ 155 (220)
T 3sjs_A 88 TALRMMRIFDTDFNGHISFYEFMAMYKFM-------ELAYNLFVMNARA-----RSGTLEPHEILPALQQLGFYINQRTS 155 (220)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCCS-----STTEECHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHHCCC-----CCCCCcHHHHHHHHHHhCCCCCHHHH
Confidence 56778888888888888888887776642 6677777777665 45568888888776644334455678
Q ss_pred HHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhh-cCCCCC------CCCHHHHhhhhc
Q 010673 138 WAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLY-DIDNDG------AVRPAELEDLFL 204 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~-D~d~dG------~l~~~e~~~l~~ 204 (504)
..+++.+| |++|.|+.+++ . .+ .....+.++|+.+ |.+++| .|+++||..+..
T Consensus 156 ~~l~~~~d-d~dg~I~~~eF~~-~~------------~~l~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~ 216 (220)
T 3sjs_A 156 LLLHRLFA-RGMAFCDLNCWIA-IC------------AFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVT 216 (220)
T ss_dssp HHHHHHHC---CCSEEHHHHHH-HH------------HHHHHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCcCcHHHHHH-HH------------HHHHHHHHHHHHhcccCCCCCcccccceeHHHHHHHHH
Confidence 88888888 88888887766 4 11 0114578899998 999999 778888877654
No 345
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.85 E-value=1.2e-08 Score=81.29 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=61.3
Q ss_pred HHHHHHHHHhHhhhcCCCCC---ccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDG---ALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG---~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
+..+..++++|..|| |+|| +|+.+||..+++.. +|.++++++++.|++.+|.+ ++|.|+|++|+.++
T Consensus 5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d-----~dG~I~f~EF~~~~ 78 (92)
T 3rm1_A 5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSN-----GDGECDFQEFMAFV 78 (92)
T ss_dssp HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTT-----SSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCC-----CCCCCcHHHHHHHH
Confidence 567889999999999 8887 99999999998852 68899999999999999887 57779999999887
Q ss_pred HHH
Q 010673 126 ALF 128 (504)
Q Consensus 126 ~~~ 128 (504)
...
T Consensus 79 ~~l 81 (92)
T 3rm1_A 79 AMI 81 (92)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 346
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.85 E-value=3.7e-09 Score=84.22 Aligned_cols=70 Identities=11% Similarity=0.248 Sum_probs=61.1
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHHcC--CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKCFN--APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~~g--~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
++++..++++|+.|| +|+|| +|+.+||..+++..++ . +++++++.+++.++.+ ++|.|+|++|+.++...
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d-----~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKN-----SDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTT-----CSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHH
Confidence 567889999999999 99999 9999999999887644 5 8999999999999877 46679999999887643
No 347
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.84 E-value=1.1e-08 Score=81.69 Aligned_cols=66 Identities=18% Similarity=0.276 Sum_probs=58.5
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..+.++++|..||+|+||.|+.+||..+++. +|.++++++++.+++.++.+ ++|.|++++|+.++.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~e~~~l~~~~D~d-----~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADID-----GDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHh
Confidence 4567999999999999999999999999875 59999999999999999876 467799999987754
No 348
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.83 E-value=1.2e-08 Score=81.04 Aligned_cols=71 Identities=15% Similarity=0.259 Sum_probs=62.7
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
++.+..++++|..|| +|+|| +|+.+||..+++.. +|.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 5 ~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d-----~dg~i~~~eF~~~~~ 79 (93)
T 1k2h_A 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN-----GDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHC-----TTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 567889999999999 79999 99999999998863 68999999999999999887 467799999998876
Q ss_pred HH
Q 010673 127 LF 128 (504)
Q Consensus 127 ~~ 128 (504)
..
T Consensus 80 ~~ 81 (93)
T 1k2h_A 80 AL 81 (93)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 349
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=98.82 E-value=4.8e-10 Score=96.22 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=58.4
Q ss_pred HHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccCh-
Q 010673 97 VGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELAS- 173 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~- 173 (504)
+.|++.++.+ ++|.|+|++|+.++..... ....++++.+|+.||.|++|.|+.++| . .+ ..++.
T Consensus 6 ~~l~~~~D~d-----~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~-~l-------~~~g~~ 72 (135)
T 3h4s_E 6 KSMLLETTST-----TKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRR-NS-------GILGIE 72 (135)
T ss_dssp ------------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHH-HG-------GGGTCC
T ss_pred HHHHHHHcCC-----CCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHH-HH-------HHhCCC
Confidence 5677777776 4677999999988765443 233467999999999999999999999 5 33 13331
Q ss_pred hH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 174 EA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 174 ~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
.. .+++.++|+.+|.|+||.|+++||..++...
T Consensus 73 ~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 73 GMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp CCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 22 3778999999999999999999999988753
No 350
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=98.81 E-value=5.9e-09 Score=102.12 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=74.0
Q ss_pred hHhhhhhhhhhcccccEEEEEEeCCCcc-cHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccc--hHHHHHHHH
Q 010673 345 GVKKILSNKEALASCDVTIFVYDSSDEY-SWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMA--VQDSARVTQ 421 (504)
Q Consensus 345 ~~~~~~~~~~~~~~ad~iilV~D~s~~~-s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~--~~~~~~~~~ 421 (504)
++..+. ..++.++|++++|+|++++. ++..+..|+..+... ++|+++|+||+|+.++.+. .+...++++
T Consensus 68 r~~~l~--r~~~~naD~vliV~d~~~p~~s~~~l~~~l~~~~~~------~~~~ilV~NK~DL~~~~~v~~~~~~~~~~~ 139 (302)
T 2yv5_A 68 RKNLLI--RPKVANVDRVIIVETLKMPEFNNYLLDNMLVVYEYF------KVEPVIVFNKIDLLNEEEKKELERWISIYR 139 (302)
T ss_dssp CSCEEE--TTEEESCCEEEEEECSTTTTCCHHHHHHHHHHHHHT------TCEEEEEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred hHHHHh--HHHHHhcCEEEEEEECCCCCCCHHHHHHHHHHHHhC------CCCEEEEEEcccCCCccccHHHHHHHHHHH
Confidence 344444 34789999999999999986 899889999877653 8999999999999865421 235566677
Q ss_pred HhCCCCeEEEeccc-cCHHHHHHHHH
Q 010673 422 ELGIEPPIPVSMKS-KDLNNVFSRII 446 (504)
Q Consensus 422 ~~~~~~~~~vSak~-~gi~el~~~l~ 446 (504)
.++.+ ++++||++ .|++++++.+.
T Consensus 140 ~~g~~-~~~~SA~~g~gi~~L~~~l~ 164 (302)
T 2yv5_A 140 DAGYD-VLKVSAKTGEGIDELVDYLE 164 (302)
T ss_dssp HTTCE-EEECCTTTCTTHHHHHHHTT
T ss_pred HCCCe-EEEEECCCCCCHHHHHhhcc
Confidence 77875 99999999 99999988764
No 351
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.79 E-value=4.2e-09 Score=85.10 Aligned_cols=67 Identities=10% Similarity=0.068 Sum_probs=57.8
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
++...++++|+.||+|+||+|+.+||..+++. +| ++++++..|++.++.+ ++|.|+++||+.++...
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~~--l~~~~l~~i~~~~D~d-----~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTD-----GKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCS-----SSSSCCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cC--CCHHHHHHHHHHHCCC-----CCCcCCHHHHHHHHHHH
Confidence 44678999999999999999999999999874 35 7899999999999877 57779999999887643
No 352
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.79 E-value=2.7e-09 Score=82.86 Aligned_cols=72 Identities=19% Similarity=0.290 Sum_probs=60.0
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcC--CCCCHHHHHH----HHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFN--APLQPAEIVG----VKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g--~~~~~~e~~~----~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
+++....++++|..||.|+||.|+.+||..++.. +| .+++++++.. ++..++.+ ++|.|++++|+..+
T Consensus 2 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~D~~-----~dg~I~~~eF~~~~ 75 (83)
T 1yx7_A 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVT-LDAYKALSKDKVKEASAKLIKMADKN-----SDGKISKEEFLNAN 75 (83)
T ss_dssp CSCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHH-HTTCTTTTTTTTHHHHHHHHTTTCSS-----SCSCCSHHHHHHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-HccccCCCHHHHHHHHHHHHHHhCCC-----CCCCCcHHHHHHhh
Confidence 4455678999999999999999999999999875 58 8999999999 88777665 46779999999776
Q ss_pred HHHH
Q 010673 126 ALFI 129 (504)
Q Consensus 126 ~~~~ 129 (504)
...+
T Consensus 76 ~~~~ 79 (83)
T 1yx7_A 76 AELL 79 (83)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 353
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens}
Probab=98.79 E-value=2.2e-09 Score=107.98 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=51.3
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCCCccceEEEEEEEcCCC---------------cEEEEEEecCChhh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGG---------------NKKTLILQEIPEEG 345 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~T~~~~~~~~~v~~~~~---------------~~~~li~d~~g~~~ 345 (504)
....++|+++|.+|||||||+|+|++..+.....|+++.......+.+++. ...+.+||++|...
T Consensus 19 i~~~~kvgIVG~pnvGKSTL~n~Ltg~~~~~~~~p~tTi~p~~g~v~v~~~r~~~l~~~~~p~~~~~~~i~lvDtpGl~~ 98 (396)
T 2ohf_A 19 FGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKIPAFLNVVDIAGLVK 98 (396)
T ss_dssp SSSCCCEEEECCSSSSHHHHHHHHHC-------------CCSEEEEECCCHHHHHHHHHHCCSEEECCEEEEEECCC---
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHHCCCccccCCCccccCceeEEEEECCccceeeccccCcccccccccEEEECCCccc
Confidence 456689999999999999999999998764333332222233334555521 12467899998754
Q ss_pred Hhh----hh-hhhhhcccccEEEEEEeCCCcccH
Q 010673 346 VKK----IL-SNKEALASCDVTIFVYDSSDEYSW 374 (504)
Q Consensus 346 ~~~----~~-~~~~~~~~ad~iilV~D~s~~~s~ 374 (504)
..+ +. ....+++.+|++++|+|+++..++
T Consensus 99 ~as~~~glg~~~l~~ir~aD~Il~VvD~~~~~~i 132 (396)
T 2ohf_A 99 GAHNGQGLGNAFLSHISACDGIFHLTRAFEDDDI 132 (396)
T ss_dssp --------CCHHHHHHHTSSSEEEEEEC------
T ss_pred ccchhhHHHHHHHHHHHhcCeEEEEEecCCCcch
Confidence 322 11 124678999999999999875544
No 354
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.78 E-value=6e-09 Score=83.08 Aligned_cols=70 Identities=9% Similarity=0.046 Sum_probs=61.4
Q ss_pred HHHHHHHHHhHhhhcC-CCCC-ccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 53 PRCVRALKRIFIICDH-DMDG-ALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~-d~dG-~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
++....++++|+.||. |+|| .|+.+||..++.+.+|..++.++++.+++.++.+ ++|.|+|++|+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d-----~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDIN-----TDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTT-----CSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCC-----CCCCCcHHHHHHHHHH
Confidence 4567899999999999 9999 9999999999856789888889999999999877 4677999999977753
No 355
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.78 E-value=1.2e-08 Score=83.49 Aligned_cols=71 Identities=17% Similarity=0.264 Sum_probs=62.8
Q ss_pred CcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 49 QTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 49 ~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..| ++....++++|..||.|+||.|+.+||..++.. +|.+++++++..++..++.+ ++|.|++++|+.++.
T Consensus 25 ~~l-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~l~~~~D~d-----~dg~i~~~eF~~~~~ 95 (107)
T 2d58_A 25 EDL-PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSG-----SGETFSYPDFLRMML 95 (107)
T ss_dssp TTH-HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSS-----SSSEECHHHHHHHHS
T ss_pred Hhh-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCeEcHHHHHHHHH
Confidence 456 889999999999999999999999999999774 69999999999999999766 456699999997753
No 356
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.78 E-value=5.2e-09 Score=84.75 Aligned_cols=69 Identities=16% Similarity=0.184 Sum_probs=59.9
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHH----cCC--CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKC----FNA--PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~----~g~--~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
++++.+|+++|+.||.| ||+|+.+||..+++.. +|. ++++++++.|++.++.+ ++|.|+|++|+.++.
T Consensus 6 ~~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d-----~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 6 ERSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKN-----EDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTT-----CSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 56788999999999977 8999999999998764 355 78999999999999887 577799999998876
Q ss_pred H
Q 010673 127 L 127 (504)
Q Consensus 127 ~ 127 (504)
.
T Consensus 80 ~ 80 (100)
T 1psr_A 80 D 80 (100)
T ss_dssp H
T ss_pred H
Confidence 4
No 357
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.78 E-value=6.6e-09 Score=76.87 Aligned_cols=63 Identities=22% Similarity=0.288 Sum_probs=56.0
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
.++++|..||+|+||.|+.+|+..++.. +|.+++++++..+++.++.+ ++|.|++++|+.++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~D~~-----~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALA-FSPYFTQEDIVKFFEEIDVD-----GNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHH-TCTTSCHHHHHHHHHHHCCS-----SSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCC-----CCCcCcHHHHHHHHH
Confidence 4789999999999999999999999775 69999999999999999776 466699999997764
No 358
>3j25_A Tetracycline resistance protein TETM; antibiotic resistance, translation; HET: GCP; 7.20A {Enterococcus faecalis}
Probab=98.77 E-value=2.7e-09 Score=115.08 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=75.4
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCC--CCC---CCCC-Cc----------cceE--EEEEEEcCCCcEEEEEEecCChhhH
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERP--FSE---NYAP-TT----------GEQY--AVNVVDQPGGNKKTLILQEIPEEGV 346 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~--~~~---~~~~-T~----------~~~~--~~~~v~~~~~~~~~li~d~~g~~~~ 346 (504)
-+|+|+|+.++|||||..+|+... ... .... +. +.++ ....+.+. ...+.++|++|+..|
T Consensus 3 RNi~IiaHvD~GKTTL~e~LL~~~G~i~~~g~v~~g~~~~D~~~~EreRGITI~s~~~~~~~~--~~~iNlIDTPGH~DF 80 (638)
T 3j25_A 3 INIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGITSFQWE--NTKVNIIDTPGHMDF 80 (638)
T ss_dssp CCCEEECCSTTSSHHHHHHHHHHHTCCSSCSSCCCSCCSTTCSTTHHHHSSCSSCCCCCCBCS--SCBCCCEECCCSSST
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCccccccccCCcccCCcHHHHhCCCcEEeeeEEEEEC--CEEEEEEECCCcHHH
Confidence 368999999999999999997221 100 0000 00 0111 11123343 356778999999877
Q ss_pred hhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCC
Q 010673 347 KKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPY 409 (504)
Q Consensus 347 ~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~ 409 (504)
..-. ...++-+|++|+|+|+...-.-+. ...+..+.+. ++|.+++.||+|....
T Consensus 81 ~~Ev--~raL~~~DgavlVVDa~~GV~~qT-~~v~~~a~~~------~lp~i~~INKmDr~~a 134 (638)
T 3j25_A 81 LAEV--YRSLSVLDGAILLISAKDGVQAQT-RILFHALRKM------GIPTIFFINKIDQNGI 134 (638)
T ss_dssp HHHH--HHHHTTCSEEECCEESSCTTCSHH-HHHHHHHHHH------TCSCEECCEECCSSSC
T ss_pred HHHH--HHHHHHhCEEEEEEeCCCCCcHHH-HHHHHHHHHc------CCCeEEEEeccccccC
Confidence 4433 457789999999999988754444 4445555555 8999999999998653
No 359
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.76 E-value=1.1e-08 Score=82.02 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=59.8
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHH----cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKC----FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~----~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
++++.+|+++|+.||. +||+|+.+||..+++.. +|.++++++++.|++.++.+ ++|.|+|++|+.++...
T Consensus 5 ~~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d-----~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 5 EHAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQC-----RDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTT-----SSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHH
Confidence 5678899999999994 67899999999998764 46688999999999999887 57779999999887643
No 360
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=98.74 E-value=1.3e-08 Score=88.44 Aligned_cols=64 Identities=22% Similarity=0.312 Sum_probs=57.7
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|++|+|+.+||..++. .+|.++++++++.|++.++.+ ++|.|++++|+.++.
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~e~~~l~~~~D~d-----~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMI-NLGEKVTDEEIDEMIREADFD-----GDGMINYEEFVWMIS 146 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHH-HHTCCCCHHHHHHHHHHHCCS-----CCSSEEHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHH-HcCccccHHHHHHHHHHhCCC-----CCCeEeHHHHHHHHh
Confidence 4689999999999999999999999877 469999999999999999877 577799999998764
No 361
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.74 E-value=9.4e-09 Score=87.83 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=58.3
Q ss_pred hHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 52 KPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 52 ~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
.+++...|+++|+.|| |+||+|+.+||..++++ +| +++++++.|++.+|.+ ++|.|+|+||+.+|..
T Consensus 46 ~~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~-~g--l~~~el~~I~~~~D~d-----~dG~Ld~~EF~~am~l 112 (139)
T 2jq6_A 46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK-SK--LPNTVLGKIWKLADVD-----KDGLLDDEEFALANHL 112 (139)
T ss_dssp GGGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCSS-----CCSEEEHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHH-hC--cCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHH
Confidence 3567889999999999 99999999999999886 45 8899999999999876 4666999999977653
No 362
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=98.74 E-value=1.8e-08 Score=91.91 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=81.9
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh--
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-- 130 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-- 130 (504)
+.....++++|..+|.|+||.|+.+|+..++.. ++...+++++..+++.+|.+ ++|.|++++|..++.....
T Consensus 48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d-----~~G~I~~~Ef~~~~~~~~~~~ 121 (198)
T 2r2i_A 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSL-VLKGKVDQKLRWYFKLYDVD-----GNGCIDRGELLNIIKAIRAIN 121 (198)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HSSCCHHHHHHHHHHHHCTT-----CSSCEEHHHHHHHHHHTTGGG
T ss_pred cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-HccCchHHHHHHHHHHhcCC-----CCCcCcHHHHHHHHHHHHhhc
Confidence 444566999999999999999999999998775 47788899999999999887 5777999999988765432
Q ss_pred ----cCCc-hhHHHHHHhhcCCCCccccCCCC
Q 010673 131 ----KGRL-ETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 131 ----~~~~-e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
.... +.+..+|+.+|.|++|.|+.+++
T Consensus 122 ~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef 153 (198)
T 2r2i_A 122 RCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153 (198)
T ss_dssp GSSSCCCHHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred CCCchhhHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 1122 34889999999999999998887
No 363
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.74 E-value=2e-08 Score=76.85 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=56.4
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
..++++|..||.|+||+|+.+|+..+++.+ | ++++++++.++..++.+ ++|.|++++|+.++..
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-g-~~~~~~~~~~~~~~D~~-----~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTL-G-STSADEVQRMMAEIDTD-----GDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHH-H-TCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-C-CCCHHHHHHHHHHhCCC-----CCCeEcHHHHHHHHHH
Confidence 468999999999999999999999998864 7 99999999999999876 4667999999977653
No 364
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.71 E-value=9.2e-09 Score=77.07 Aligned_cols=64 Identities=22% Similarity=0.277 Sum_probs=56.7
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...++++|..||.|+||.|+.+||..+++ .+|.+++++++..++..++.+ ++|.|++++|+.++
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~eF~~~~ 68 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMA-GLGQPLPQEELDAMIREADVD-----QDGRVNYEEFARML 68 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGG-GTTCSSCHHHHHHHHHHCCSS-----SSSEEETTHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHH
Confidence 46799999999999999999999999877 569999999999999999776 46669999998765
No 365
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=98.71 E-value=1.1e-08 Score=89.78 Aligned_cols=63 Identities=16% Similarity=0.229 Sum_probs=55.8
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..|+++|+.||+|++|+|+.+||..++. .+|.++|++|++.|++.++. ++|.|+|++|+.++.
T Consensus 85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~-~~g~~ls~~ei~~~~~~~D~------~dG~I~y~EF~~~m~ 147 (153)
T 3i5g_B 85 DALRNAFSMFDEDGQGFIPEDYLKDLLE-NMGDNFSKEEIKNVWKDAPL------KNKQFNYNKMVDIKG 147 (153)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHH-SSSSCCCHHHHHHHHTTCCE------ETTEECHHHHHHHHH
T ss_pred HHHHHHHhccccCCCCeEeHHHHHHHHH-HcCCcCCHHHHHHHHHHhCC------CcCEEcHHHHHHHhc
Confidence 5799999999999999999999999977 57999999999999988853 356699999998875
No 366
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.71 E-value=4.2e-10 Score=94.96 Aligned_cols=100 Identities=17% Similarity=0.087 Sum_probs=47.8
Q ss_pred HHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHH-----HHHHHHh-cCCchhHHHHHHhhcCCCCccccCCCC-
Q 010673 85 KCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF-----LHALFIE-KGRLETTWAVLRKFGYGDDLELRDDFL- 157 (504)
Q Consensus 85 ~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~-----l~~~~~~-~~~~e~~~~~~~~f~~d~~~~i~~~~l- 157 (504)
+.+|.+++++|++.++..+ +|.|+|++|+. ++..... ....++++++|+.|| |.|+.++|
T Consensus 3 r~lG~~~t~~ei~~~~~~~---------~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~ 69 (123)
T 2kld_A 3 TAIGINDTYSEVKSDLAQQ---------KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELR 69 (123)
T ss_dssp ---------------------------------------------------------CCSCSSTTTT----TCEEHHHHH
T ss_pred hhcCCCCCHHHHHHHHHHc---------CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHH
Confidence 3579999999999999766 45699999998 6654432 334467899999998 99999999
Q ss_pred CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 158 PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 158 ~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
. .+ ..++. ..+++.++|+.+|.|+||.|+++||..++...
T Consensus 70 ~-~l-------~~lG~-t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~ 109 (123)
T 2kld_A 70 Q-DL-------KGKGH-TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109 (123)
T ss_dssp H-HT-------TTCCS-SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTT
T ss_pred H-HH-------HHhCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 6 33 23333 34778999999999999999999999998754
No 367
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.71 E-value=2.9e-09 Score=92.32 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=46.9
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCC
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGR 133 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~ 133 (504)
+...+-..+|..+|.|+||.|+.+|+..++...+.. . .. ....
T Consensus 24 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~----------------~------~~---------------~~~~ 66 (143)
T 3a4u_B 24 EEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINK----------------P------EA---------------EMSP 66 (143)
T ss_dssp ----------------------------------------------------------------------------CCCH
T ss_pred hccCCCHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc----------------c------cc---------------ccCH
Confidence 344556679999999999999999996654432110 0 00 0011
Q ss_pred chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCC------ccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhh
Q 010673 134 LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQ------SVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLF 203 (504)
Q Consensus 134 ~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~------~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~ 203 (504)
.+++..+|+.||.|++|.|+.++| . .+.. ... ...++.... +.+..+|+.+|.|+||.|+++||..++
T Consensus 67 ~~~l~~~F~~~D~d~dG~I~~~El~~-~l~~-~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 67 QELQLHYFKMHDYDGNNLLDGLELST-AITH-VHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHTCTTCSSCEEHHHHHH-TCC--------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHH-HHHH-HHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 246788899999999999998888 5 3311 100 013443333 555778899999999999999998765
No 368
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.70 E-value=6.9e-09 Score=76.61 Aligned_cols=63 Identities=16% Similarity=0.149 Sum_probs=55.1
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+++++|..||.|+||.|+.+|+..+++. +|.++++++++.+++.++.+ ++|.|++++|+.++.
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~-----~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 1 MAEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDAD-----GNGEIDQNEFAKFYG 63 (66)
T ss_dssp -CCHHHHHHCTTCSSSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCTT-----CSSSCCHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcccHHHHHHHHHH-ccCCCcHHHHHHHHHHHCCC-----CCCCCCHHHHHHHHH
Confidence 3678999999999999999999999875 48899999999999999877 577799999987653
No 369
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=98.69 E-value=1.3e-07 Score=95.42 Aligned_cols=90 Identities=13% Similarity=0.068 Sum_probs=56.0
Q ss_pred cCceEEEEEEcCCCchhhHHHHHHhcCCC-CCCCCCCccceEEEEEEEcCCCc---------------EEEEEEecCChh
Q 010673 281 ERNVFRCLLFGPQNAGKSALLNSFLERPF-SENYAPTTGEQYAVNVVDQPGGN---------------KKTLILQEIPEE 344 (504)
Q Consensus 281 ~~~~~kI~vvG~~~vGKSSLin~l~~~~~-~~~~~~T~~~~~~~~~v~~~~~~---------------~~~li~d~~g~~ 344 (504)
.+...+|+|+|.+|||||||+|+|++... .....|++........+.+++.. ....++|++|..
T Consensus 17 v~~g~~vgiVG~pnaGKSTL~n~Ltg~~~a~~~~~p~tTi~p~~G~v~v~~~r~~~l~~~~~~~~~v~~~i~lvD~pGl~ 96 (392)
T 1ni3_A 17 PGNNLKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLT 96 (392)
T ss_dssp SSSCCEEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCTTEEEEEECCHHHHHHHHHHCCSEEECEEEEEECTGGGC
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHHCCCcccccCCCceeecceeeeeeeCCcchhhhhhhcccccccCcceEEEeccccc
Confidence 45578999999999999999999999776 32233322211222234555211 245677887742
Q ss_pred hH----hhhh-hhhhhcccccEEEEEEeCCC
Q 010673 345 GV----KKIL-SNKEALASCDVTIFVYDSSD 370 (504)
Q Consensus 345 ~~----~~~~-~~~~~~~~ad~iilV~D~s~ 370 (504)
.. +.+. .....++.+|++++|+|+++
T Consensus 97 ~~~s~~e~L~~~fl~~ir~~d~il~Vvd~~~ 127 (392)
T 1ni3_A 97 KGASTGVGLGNAFLSHVRAVDAIYQVVRAFD 127 (392)
T ss_dssp CCCCSSSSSCHHHHHHHTTCSEEEEEEECCC
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 11 1110 11446789999999999874
No 370
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.69 E-value=2.1e-08 Score=78.97 Aligned_cols=70 Identities=21% Similarity=0.288 Sum_probs=61.2
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHH--cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKC--FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~--~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
++....++++|+.|| +|+|| .|+.+||..+++.. +|.++++++++.+++.++.+ ++|.|++++|+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRN-----KDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHT-----TTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCC-----CCCCCcHHHHHHHHHH
Confidence 456679999999999 69999 99999999998864 78999999999999999887 4666999999977654
No 371
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.68 E-value=1.4e-08 Score=77.69 Aligned_cols=68 Identities=21% Similarity=0.243 Sum_probs=59.8
Q ss_pred HHHHHHHhHhhhcC-CCCC-ccCHHHHHHHHHHHcCCCC-CHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 55 CVRALKRIFIICDH-DMDG-ALNDAELNEFQVKCFNAPL-QPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 55 ~~~~l~~~F~~~D~-d~dG-~l~~~El~~~~~~~~g~~~-~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
....++++|..||. |+|| .|+.+||..+++..+|..+ ++++++.++..++.+ ++|.|++++|+.++..
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKN-----GDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCC-----SSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCC-----CCCCCcHHHHHHHHHH
Confidence 46789999999999 9999 9999999999887689888 999999999999776 4667999999977653
No 372
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=98.68 E-value=4e-08 Score=80.40 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=58.8
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.++.+ ++|.|++++|+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSD-----HDGKIGADEFAKMVA 107 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 356789999999999999999999999987542 9999999999999999877 577799999997764
No 373
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=98.67 E-value=4.1e-08 Score=88.13 Aligned_cols=64 Identities=23% Similarity=0.314 Sum_probs=57.5
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
...|+++|+.||+|++|+|+.+||..++. .+|.+++++|++.|++.++ + ++|.|+|++|+.+++
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~-~~g~~~~~~ei~~l~~~~d-d-----~dG~I~~~EF~~~m~ 146 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLT-SIGEKLTDAEVDDMLREVS-D-----GSGEINIQQFAALLS 146 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHH-TTTCCCCHHHHHHHHHHHH-T-----TSSCBCTTHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCcccchHHHHHHHHhhc-C-----CCCeEeHHHHHHHHH
Confidence 46799999999999999999999999977 5699999999999999986 5 477799999998874
No 374
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=98.67 E-value=1.3e-08 Score=91.50 Aligned_cols=148 Identities=17% Similarity=0.202 Sum_probs=101.3
Q ss_pred cCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc-CCchhHHHHHHhhcCCCCccc
Q 010673 74 LNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK-GRLETTWAVLRKFGYGDDLEL 152 (504)
Q Consensus 74 l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~-~~~e~~~~~~~~f~~d~~~~i 152 (504)
|+.+||..+++. ..++++++..+.+..+..+ ++|.|++++|..++...... ...+++..+|+.+|.|++|.|
T Consensus 1 l~~~el~~l~~~---~~~s~~~i~~l~~~fd~~d----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i 73 (183)
T 1s6c_A 1 HRPEGLEQLEAQ---TNFTKRELQVLYRGFKNEX----PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSV 73 (183)
T ss_dssp -----CHHHHHH---SSCCHHHHHHHHHHHHHHC----TTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCE
T ss_pred CChHHHHHHHHh---cCCCHHHHHHHHHHHHHhC----CCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcE
Confidence 467788888663 3679999999999998731 35669999999887654333 345679999999999999999
Q ss_pred cCCCC-CCCCCCCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC----CC---CCCCC----C---cc
Q 010673 153 RDDFL-PVPTKLSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA----PE---SPWDE----A---PY 216 (504)
Q Consensus 153 ~~~~l-~~~~~~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~----p~---~p~~~----~---~~ 216 (504)
+.+++ . .+ ..++.. ..+.+..+|+.+|.|++|.|+.+||..++... .. .+... . ..
T Consensus 74 ~~~Ef~~-~~-------~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 145 (183)
T 1s6c_A 74 KFEDFVT-AL-------SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVF 145 (183)
T ss_dssp EHHHHHH-HH-------HHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHH
T ss_pred eHHHHHH-HH-------HHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHH
Confidence 98888 5 22 111111 12678999999999999999999999988642 11 11111 0 11
Q ss_pred ccccccccCCcccHHHHHHh
Q 010673 217 KDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 217 ~~~~~~~~~g~i~~~~~l~~ 236 (504)
......+..|.|++..|+..
T Consensus 146 f~~~D~d~dG~i~~~Ef~~~ 165 (183)
T 1s6c_A 146 FQKMDKNKDGIVTLDEFLES 165 (183)
T ss_dssp HHHHCTTCSSEECHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHH
Confidence 22344567889999999665
No 375
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=98.66 E-value=3.9e-08 Score=86.77 Aligned_cols=66 Identities=11% Similarity=0.159 Sum_probs=56.1
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..|++||+.||+|++|+|+.+||..++. .+|.+++++|++.|++.++.+. + ++|.|+|++|+.++.
T Consensus 85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~-~~g~~ls~~e~~~l~~~~D~~~-d--~dG~I~~~EF~~~m~ 150 (159)
T 3i5g_C 85 DEFMEAFKTFDREGQGLISSAEIRNVLK-MLGERITEDQCNDIFTFCDIRE-D--IDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHH-HSSSCCCHHHHHHHHHHTTCCC-C--SSCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCcCC-C--CCCeEeHHHHHHHHH
Confidence 4689999999999999999999999977 5799999999999999986420 0 356799999997654
No 376
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=98.66 E-value=2.9e-08 Score=81.19 Aligned_cols=67 Identities=21% Similarity=0.250 Sum_probs=58.7
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.++.+ ++|.|++++|+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKD-----GDGKIGVEEFSTLVA 107 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCC-----CCCcCCHHHHHHHHH
Confidence 456889999999999999999999999988653 8899999999999999876 467799999997654
No 377
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.66 E-value=1.3e-08 Score=78.66 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=57.5
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcC-CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFN-APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g-~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
+.....++ +|..||.|+||.|+.+||..+++ .+| .+++++++..++..++.+ ++|.|++++|+.++.
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~ 72 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQ-KVGEEPLTDAEVEEAMKEADED-----GNGVIDIPEFMDLIK 72 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSS-TTTTCCCCHHHHHHHHHHHCSS-----GGGSEEHHHHHHHHH
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 34567899 99999999999999999999877 458 999999999999999876 467799999997764
No 378
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.65 E-value=6.2e-09 Score=81.57 Aligned_cols=67 Identities=19% Similarity=0.246 Sum_probs=57.6
Q ss_pred chHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHH
Q 010673 51 LKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF 123 (504)
Q Consensus 51 l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~ 123 (504)
++++....++++|..||+|+||.|+.+||..+++ .+|.++++++++.++..++.+ ++|.|++++|+.
T Consensus 17 l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~-----~~g~i~~~eF~~ 83 (87)
T 1s6j_A 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADID-----KSGTIDYGEFIA 83 (87)
T ss_dssp SCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH-TTTSSCCHHHHHHHHHHHCTT-----CSSEECHHHHTT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHH
Confidence 3444556799999999999999999999999977 569999999999999999876 466699999974
No 379
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.65 E-value=2.9e-08 Score=75.39 Aligned_cols=66 Identities=15% Similarity=0.224 Sum_probs=58.0
Q ss_pred HHHHHHhHhhh-cCCCC-CccCHHHHHHHHHHHcCCCC--CHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 56 VRALKRIFIIC-DHDMD-GALNDAELNEFQVKCFNAPL--QPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 56 ~~~l~~~F~~~-D~d~d-G~l~~~El~~~~~~~~g~~~--~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
...++++|..| |+|+| |.|+.+||..++.. +|.++ +++++..++..++.+ ++|.|++++|+.++..
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~l~~~~D~~-----~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQT-LGPSLLKGMSTLDEMIEEVDKN-----GDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHH-HGGGSCTTSCSHHHHHHHHCTT-----CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHH-hCCCcCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHHH
Confidence 45799999999 99999 99999999999875 49999 999999999999776 4666999999987654
No 380
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=98.65 E-value=2.3e-08 Score=82.01 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=58.1
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||+|+.+||..++.... |.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKD-----GDGKIGIDEFETLVH 108 (110)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCC-----CCCeEcHHHHHHHHH
Confidence 467899999999999999999999998877442 7899999999999999876 467799999997653
No 381
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=98.65 E-value=3.7e-08 Score=80.51 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=57.9
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||+|+.+||..++.... |.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKD-----GDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHh
Confidence 456799999999999999999999998877432 8899999999999999876 467799999987653
No 382
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=98.65 E-value=8.5e-08 Score=82.60 Aligned_cols=64 Identities=16% Similarity=0.208 Sum_probs=57.5
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...++++|+.||+|+||+|+.+||..++. .+|.++++++++.|++.++.+ ++|.|++++|+.++
T Consensus 78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~D~d-----~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 78 KEEILKAFKLFDDDETGKISFKNLKRVAK-ELGENLTDEELQEMIDEADRD-----GDGEVSEQEFLRIM 141 (143)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTT-----SSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHH
Confidence 46789999999999999999999999976 469999999999999999877 57779999998765
No 383
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.64 E-value=5e-08 Score=79.35 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=58.5
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
.....++++|..||+|+||+|+.+||..+++. +|.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 21 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~e~~~l~~~~d~~-----~~g~i~~~eF~~~~~ 87 (105)
T 1wlz_A 21 SHYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVN-----AKGRLKYPDFLSRFS 87 (105)
T ss_dssp HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HTCCCCHHHHHHHHTTSCBC-----TTSCBCHHHHHHHHC
T ss_pred chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHcCCC-----CCCCCcHHHHHHHHh
Confidence 34578999999999999999999999999875 59999999999999988765 466799999997764
No 384
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=98.64 E-value=2.9e-08 Score=81.25 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=58.1
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
....++++|+.||+|+||+|+.+||..++.... |.++++++++.+++.++.+ ++|.|++++|+.++
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~ 107 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSD-----GDGAIGVDEWAALV 107 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTT-----CSSEECHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHH
Confidence 456899999999999999999999999988653 8899999999999999876 46669999998765
No 385
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.64 E-value=6.7e-09 Score=114.08 Aligned_cols=139 Identities=10% Similarity=0.030 Sum_probs=102.9
Q ss_pred HHHHHHhHhh--hcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhcc--CCcCCCCCCHHhHHHHHHHHHhc
Q 010673 56 VRALKRIFII--CDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQH--DGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 56 ~~~l~~~F~~--~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~--~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
...|+++|+. ||+|+||.|+.+||...+. . ..++++.+++.++.+.. +..++|.|+|++|+.+++...
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~----~--~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~-- 220 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFS----A--DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC-- 220 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTG----G--GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHh----c--CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC--
Confidence 4578999998 9999999999999966543 2 57788889888876521 222355699999998887532
Q ss_pred CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccCh-----hHHHHHHHhhhhhcCC----CCCCCCHHHHhh
Q 010673 132 GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELAS-----EAVEFLRGIFGLYDID----NDGAVRPAELED 201 (504)
Q Consensus 132 ~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~-----~~~~~l~~lf~~~D~d----~dG~l~~~e~~~ 201 (504)
..+++.++|+.|+.|+++.|+.++| . -+ ...+....+.. ...+.+.+||++++.+ ++|.+++++|..
T Consensus 221 -~R~EI~eiF~~ydsd~~g~mT~~EL~~-FL-~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~ 297 (885)
T 3ohm_B 221 -LRPDIDKILLEIGAKGKPYLTLEQLMD-FI-NQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSR 297 (885)
T ss_dssp -CCHHHHHHHHHTTCCSTTCEEHHHHHH-HH-HHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHH
T ss_pred -CHHHHHHHHHHHhcCCCCccCHHHHHH-HH-HHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhh
Confidence 3578999999999999999999888 4 22 11100001111 1237799999999999 899999999988
Q ss_pred hhcc
Q 010673 202 LFLT 205 (504)
Q Consensus 202 l~~~ 205 (504)
.+..
T Consensus 298 yL~S 301 (885)
T 3ohm_B 298 YLGG 301 (885)
T ss_dssp HHTS
T ss_pred hccC
Confidence 8764
No 386
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=98.63 E-value=3.4e-08 Score=80.88 Aligned_cols=66 Identities=23% Similarity=0.251 Sum_probs=57.4
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
....++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.++.+ ++|.|++++|+.++
T Consensus 40 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~-----~dg~i~~~EF~~~~ 107 (109)
T 3fs7_A 40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTD-----GDGKIGVEEFQSLV 107 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHH
Confidence 356799999999999999999999998876432 8899999999999999877 57779999998775
No 387
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=98.63 E-value=8.6e-08 Score=81.97 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=60.3
Q ss_pred HHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCC-CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH
Q 010673 54 RCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNA-PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF 128 (504)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~-~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~ 128 (504)
.....++++|+.||+|+||+|+.+||..++. .+|. ++++++++.++..++.+ ++|.|++++|+.++...
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~e~~~~~~~~D~d-----~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 37 EFVSELCKGFSLLADPERHLITAESLRRNSG-ILGIEGMSKEDAQGMVREGDLD-----GDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHHHHHHHSBTTTTBBCHHHHHHHGG-GGTCCCCCHHHHHHHHHHHCSS-----CSSSBCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCCHHHHHHHHHHhCCC-----CCCCCcHHHHHHHHHHh
Confidence 3567899999999999999999999999977 5694 99999999999999876 46779999999887643
No 388
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=98.63 E-value=4.5e-08 Score=98.44 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=84.4
Q ss_pred ChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH----HHH
Q 010673 342 PEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ----DSA 417 (504)
Q Consensus 342 g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~----~~~ 417 (504)
..+.+..+. ..+.+.+|++++|+|++++. ..|...+.+. ..++|+++|+||+|+.......+ ...
T Consensus 55 ~~e~f~~~l--~~i~~~~~~il~VvD~~d~~-----~~~~~~l~~~----~~~~p~ilV~NK~DL~~~~~~~~~~~~~l~ 123 (368)
T 3h2y_A 55 TDDDFLRIL--NGIGKSDALVVKIVDIFDFN-----GSWLPGLHRF----VGNNKVLLVGNKADLIPKSVKHDKVKHWMR 123 (368)
T ss_dssp -CHHHHHHH--HHHHHSCCEEEEEEETTSHH-----HHCCTTHHHH----SSSSCEEEEEECGGGSCTTSCHHHHHHHHH
T ss_pred CHHHHHHHH--HHHhccCcEEEEEEECCCCc-----ccHHHHHHHH----hCCCcEEEEEEChhcCCcccCHHHHHHHHH
Confidence 445666665 35667888999999999853 4565666655 34899999999999976543322 334
Q ss_pred HHHHHhCCC--CeEEEeccc-cCHHHHHHHHHHHHhCCCCCCCCcccccchhhHHhhhcc
Q 010673 418 RVTQELGIE--PPIPVSMKS-KDLNNVFSRIIWAAEHPHLNIPETETGRNRKRYRHLVNS 474 (504)
Q Consensus 418 ~~~~~~~~~--~~~~vSak~-~gi~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 474 (504)
.+++..+.. +++.+||++ .|++++++.|.+.........-+......+...+.+.++
T Consensus 124 ~~~~~~g~~~~~v~~iSA~~g~gi~~L~~~l~~~~~~~~i~~vG~~nvGKStliN~L~~~ 183 (368)
T 3h2y_A 124 YSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGCTNVGKSTFINRMIKE 183 (368)
T ss_dssp HHHHHTTCCCSEEEECCTTTCTTHHHHHHHHHHHHTTSCEEEEEBTTSSHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEeCCCCcCHHHHHhhhhhhcccceEEEecCCCCChhHHHHHHHhh
Confidence 456777873 489999999 999999999988765444333344444445556666554
No 389
>4fn5_A EF-G 1, elongation factor G 1; translation, translation-antibiotic compl; HET: 0UO; 2.90A {Pseudomonas aeruginosa}
Probab=98.62 E-value=6.3e-07 Score=97.93 Aligned_cols=118 Identities=14% Similarity=0.121 Sum_probs=76.8
Q ss_pred CceEEEEEEcCCCchhhHHHHHHhcCC--------CCC--CC---CC---CccceE--EEEEEEcCC-----CcEEEEEE
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFLERP--------FSE--NY---AP---TTGEQY--AVNVVDQPG-----GNKKTLIL 338 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~~~~--------~~~--~~---~~---T~~~~~--~~~~v~~~~-----~~~~~li~ 338 (504)
.+.-+|+|+|+..+|||||..+|+... ... .+ .+ .-+.++ ....+.+.+ +...+.++
T Consensus 11 ~~IRNi~IiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~~~~~~D~~~~E~eRGITI~s~~~s~~~~~~~~~~~~~~iNlI 90 (709)
T 4fn5_A 11 NRYRNIGICAHVDAGKTTTTERVLFYTGVNHKLGEVHDGAATTDWMVQEQERGITITSAAVTTFWKGSRGQYDNYRVNVI 90 (709)
T ss_dssp GGEEEEEEECCSSSCHHHHHHHHHHHHHHHHHC------------------------CCEEEEEECCTTSCSCCEEEEEE
T ss_pred HHCeEEEEEcCCCCCHHHHHHHHHHhcCCCCcCceecCCCccCCChHHHHHcCCeEEeeeEEEEeccCcCCCCCEEEEEE
Confidence 455689999999999999999997221 110 00 00 001111 111233321 24677889
Q ss_pred ecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCC
Q 010673 339 QEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKP 408 (504)
Q Consensus 339 d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~ 408 (504)
|++|+..|..-. ...++-+|++|+|+|+...-.-+. ...++++.+. ++|.+++.||+|...
T Consensus 91 DTPGHvDF~~Ev--~~aLr~~DgavlvVDaveGV~~qT-~~v~~~a~~~------~lp~i~~iNKiDr~~ 151 (709)
T 4fn5_A 91 DTPGHVDFTIEV--ERSLRVLDGAVVVFCGTSGVEPQS-ETVWRQANKY------GVPRIVYVNKMDRQG 151 (709)
T ss_dssp CCCSCTTCHHHH--HHHHHHCSEEEEEEETTTCSCHHH-HHHHHHHHHH------TCCEEEEEECSSSTT
T ss_pred eCCCCcccHHHH--HHHHHHhCeEEEEEECCCCCchhH-HHHHHHHHHc------CCCeEEEEccccccC
Confidence 999997774433 457789999999999998766555 4445555555 899999999999854
No 390
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=98.62 E-value=4.1e-08 Score=88.71 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=78.7
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cC----
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KG---- 132 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~---- 132 (504)
.++++|..+|.|+||.|+.+|+..++.. ++...+++++..+++.+|.+ ++|.|++++|..++..... .|
T Consensus 64 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d-----~~G~i~~~ef~~~~~~~~~~~g~~~~ 137 (190)
T 1fpw_A 64 FANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLN-----HDGYITFDEMLTIVASVYKMMGSMVT 137 (190)
T ss_dssp HHHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSS-----CSSEEEHHHHHHHHHHHHTTSCSTTS
T ss_pred HHHHHHHHHCCCCCCcEeHHHHHHHHHH-HccCCcHHHHHHHHHHhcCC-----CCCcCcHHHHHHHHHHHHHHhccccC
Confidence 3678999999999999999999998774 58889999999999999876 4666999999987765432 11
Q ss_pred -------CchhHHHHHHhhcCCCCccccCCCC
Q 010673 133 -------RLETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 133 -------~~e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
..+++..+|+.+|.|++|.|+.+++
T Consensus 138 ~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef 169 (190)
T 1fpw_A 138 LNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169 (190)
T ss_dssp SSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHH
T ss_pred cccccchHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 2256899999999999999998877
No 391
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.61 E-value=8.7e-08 Score=79.38 Aligned_cols=74 Identities=12% Similarity=0.125 Sum_probs=64.1
Q ss_pred ccccCcchHHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHH
Q 010673 45 DHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFL 124 (504)
Q Consensus 45 ~~~~~~l~~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l 124 (504)
......+|+++++.++++|+.+|. +||+|+-+|+..++++ ..++.++|..|.+.+|.+ ++|.|+++||+..
T Consensus 21 ~~~~W~it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~---sgLp~~~L~~Iw~laD~d-----~dG~Ld~~EF~~a 91 (121)
T 3fia_A 21 SLDTWAITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQ---SGLPQPVLAQIWALADMN-----NDGRMDQVEFSIA 91 (121)
T ss_dssp CTTTSCCCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGG---GCCCHHHHHHHHHHHCTT-----CSSEECHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHH---cCCCHHHHHHHHHHHcCC-----CCCcCCHHHHHHH
Confidence 344677999999999999999999 8999999999999774 367899999999999887 4667999999966
Q ss_pred HHH
Q 010673 125 HAL 127 (504)
Q Consensus 125 ~~~ 127 (504)
|.+
T Consensus 92 M~L 94 (121)
T 3fia_A 92 MKL 94 (121)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 392
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=98.61 E-value=7.4e-08 Score=88.95 Aligned_cols=128 Identities=10% Similarity=0.025 Sum_probs=97.2
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh--
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-- 130 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-- 130 (504)
+.....++++|..+|.|+||.|+.+|+..++.. ++...+++++..+++.+|.+ ++|.|++++|..++.....
T Consensus 53 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-~~~~~~~~~l~~~F~~~D~d-----~~G~I~~~E~~~~l~~~~~~~ 126 (211)
T 2ggz_A 53 QKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNL-IMQEKMEQKLKWYFKLYDAD-----GNGSIDKNELLDMFMAVQALN 126 (211)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HSCSSHHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHHHHTTSS
T ss_pred cchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-hccCchHHHHHHHHHHhcCC-----CCCcCcHHHHHHHHHHHHhhc
Confidence 344456899999999999999999999998775 47778899999999999887 5777999999988765532
Q ss_pred ---cCCc-hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 131 ---KGRL-ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 131 ---~~~~-e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.... +.+..+|+.+|.|++|.|+.+++ . .+... ..+.++|+. .++++||..++..
T Consensus 127 ~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~-~~~~~------------~~~~~~~~~-------~~d~~~f~~~~~~ 186 (211)
T 2ggz_A 127 GQQTLSPEEFINLVFHKIDINNDGELTLEEFIN-GMAKD------------QDLLEIVYK-------SFDFSNVLRVICN 186 (211)
T ss_dssp CCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHH-HHHTT------------TTTHHHHHH-------HSCTTHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCcHHHHHH-HHHhC------------HHHHHHHhc-------cCCHHHHHHHHhc
Confidence 1122 45889999999999999998888 5 22111 234555552 2347899999886
Q ss_pred C
Q 010673 206 A 206 (504)
Q Consensus 206 ~ 206 (504)
.
T Consensus 187 ~ 187 (211)
T 2ggz_A 187 G 187 (211)
T ss_dssp H
T ss_pred C
Confidence 4
No 393
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.60 E-value=6.4e-08 Score=77.77 Aligned_cols=70 Identities=20% Similarity=0.267 Sum_probs=59.6
Q ss_pred HHHHHHHHHhHhhhc-CCCCC-ccCHHHHHHHHHHHc----CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICD-HDMDG-ALNDAELNEFQVKCF----NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~l~~~El~~~~~~~~----g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
++....++++|..|| +|+|| +|+.+||..+++..+ |.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 9 ~~~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~-----~dg~I~~~EF~~~~~ 83 (99)
T 1qls_A 9 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLD-----SDGQLDFQEFLNLIG 83 (99)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTT-----CSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 455778999999998 99999 999999999877444 3789999999999999877 467799999997765
Q ss_pred H
Q 010673 127 L 127 (504)
Q Consensus 127 ~ 127 (504)
.
T Consensus 84 ~ 84 (99)
T 1qls_A 84 G 84 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 394
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=98.60 E-value=5.7e-08 Score=85.58 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCC
Q 010673 89 APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQ 167 (504)
Q Consensus 89 ~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~ 167 (504)
..++++++..+......-+.+ ++|.|+.++|..+..........+++..+|+.+|.|++|.|+.+++ . .+.
T Consensus 19 ~~l~~~~~~~l~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~-~~~----- 90 (166)
T 2aao_A 19 ESLSEEEIAGLKEMFNMIDAD--KSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIA-ATL----- 90 (166)
T ss_dssp HHSCHHHHHHHHHHHHHHCTT--CCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHH-HHT-----
T ss_pred HhCCHHHHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH-HHH-----
Confidence 345665555544444333221 4667999999877654322234467999999999999999998777 4 220
Q ss_pred ccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCC-CCCCccccccccccCCcccHHHHHHhhh
Q 010673 168 SVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP-WDEAPYKDAAETTALGNLTLKGFVSKWA 238 (504)
Q Consensus 168 ~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p-~~~~~~~~~~~~~~~g~i~~~~~l~~w~ 238 (504)
.+.... .+.+..+|+.+|.|++|.|+.+||..++.... ++ ..-.........+..|.|++..|+..+.
T Consensus 91 --~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 160 (166)
T 2aao_A 91 --HLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG-VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQ 160 (166)
T ss_dssp --TCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC---------CCHHHHHCTTCSSSBCHHHHHHHHC
T ss_pred --HHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC-CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 111111 26789999999999999999999999988653 22 1111223344566789999999976644
No 395
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=98.59 E-value=3.7e-08 Score=92.02 Aligned_cols=153 Identities=16% Similarity=0.165 Sum_probs=103.5
Q ss_pred CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc-CCchhHHHHHHhhcCCC
Q 010673 70 MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK-GRLETTWAVLRKFGYGD 148 (504)
Q Consensus 70 ~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~-~~~e~~~~~~~~f~~d~ 148 (504)
..+.++.+||..+++.. .+++++++.+.+.++.++ ++|.|++++|..++...... ...+++..+|+.+|.|+
T Consensus 30 ~~~~l~~~~l~~l~~~~---~~s~~ei~~l~~~Fd~~d----~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~ 102 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQT---NFTKRELQVLYRGFKNEC----PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQ 102 (224)
T ss_dssp --------CHHHHHHHS---SCCHHHHHHHHHHHHHHC----TTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTC
T ss_pred CccCCCHHHHHHHHHHc---CCCHHHHHHHHHHHHhhC----CCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCC
Confidence 45789999999887743 489999999999998752 36679999999877644322 34467899999999999
Q ss_pred CccccCCCC-CCCCCCCCCCccccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC----C---CCCCCCC-----
Q 010673 149 DLELRDDFL-PVPTKLSPDQSVELAS-EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA----P---ESPWDEA----- 214 (504)
Q Consensus 149 ~~~i~~~~l-~~~~~~~~~~~~~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~----p---~~p~~~~----- 214 (504)
+|.|+.+++ . .+ ..+.. ...+.+..+|+.+|.|+||.|+.+||..++... . ..++...
T Consensus 103 ~G~I~~~Ef~~-~l-------~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 174 (224)
T 1s1e_A 103 TGSVKFEDFVT-AL-------SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH 174 (224)
T ss_dssp SSCBCHHHHHH-HH-------HHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHH
T ss_pred CCcEeHHHHHH-HH-------HHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHH
Confidence 999998888 5 22 11111 123678999999999999999999999888642 1 1112110
Q ss_pred --ccccccccccCCcccHHHHHHhh
Q 010673 215 --PYKDAAETTALGNLTLKGFVSKW 237 (504)
Q Consensus 215 --~~~~~~~~~~~g~i~~~~~l~~w 237 (504)
........+..|.|++..|+..+
T Consensus 175 ~~~~f~~~D~d~dG~Is~~EF~~~~ 199 (224)
T 1s1e_A 175 VDVFFQKMDKNKDGIVTLDEFLESC 199 (224)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 11233445678999999996653
No 396
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=98.58 E-value=2.5e-08 Score=91.61 Aligned_cols=157 Identities=11% Similarity=0.088 Sum_probs=98.1
Q ss_pred CCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCC
Q 010673 68 HDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYG 147 (504)
Q Consensus 68 ~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d 147 (504)
+|+.|.|+.+|+..++.. ..++.+++..+......-+.+.-++|.|+.++|..+... ........+..+|+.+|.|
T Consensus 11 ~~~~g~l~~~el~~l~~~---~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d 86 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASV---TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVK 86 (207)
T ss_dssp ----------CHHHHHHH---SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTT
T ss_pred hccccccCHHHHHHHHHh---CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCC
Confidence 478999999999988663 468889988888877765433113566999999876543 1111223466799999999
Q ss_pred CCccccCCCC-CCCCCCCCCCccccC--hhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC---CCCCCCCCc------
Q 010673 148 DDLELRDDFL-PVPTKLSPDQSVELA--SEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA---PESPWDEAP------ 215 (504)
Q Consensus 148 ~~~~i~~~~l-~~~~~~~~~~~~~l~--~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~---p~~p~~~~~------ 215 (504)
++|.|+.+++ . .+. .+. ....+.+..+|+.+|.|++|.|+.+||..++... .+.+.....
T Consensus 87 ~~g~i~~~Ef~~-~~~-------~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~ 158 (207)
T 2ehb_A 87 RNGVIEFGEFVR-SLG-------VFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVD 158 (207)
T ss_dssp CSSEECHHHHHH-HHG-------GGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCeEeHHHHHH-HHH-------HHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHH
Confidence 9999998888 5 221 111 1123678999999999999999999999988521 111111110
Q ss_pred -cccccccccCCcccHHHHHHh
Q 010673 216 -YKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 216 -~~~~~~~~~~g~i~~~~~l~~ 236 (504)
.......+..|.|++..|+..
T Consensus 159 ~~f~~~D~d~dG~I~~~Ef~~~ 180 (207)
T 2ehb_A 159 KAFVQADRKNDGKIDIDEWKDF 180 (207)
T ss_dssp HHHHHHCTTCSSEECHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHH
Confidence 012344567788998888544
No 397
>3l82_B F-box only protein 4; TRFH domain, helix, GTPase domain, acetylation, ADP- ribosylation, alternative splicing, cell cycle, cell division; 2.40A {Homo sapiens}
Probab=98.58 E-value=8.5e-08 Score=86.90 Aligned_cols=104 Identities=12% Similarity=0.108 Sum_probs=67.3
Q ss_pred ChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccC--CCCCCcEEEEEECC-CCCCCccchHHHHH
Q 010673 342 PEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGED--SGYGVPCLLIASKD-DLKPYTMAVQDSAR 418 (504)
Q Consensus 342 g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~--~~~~~piilV~NK~-Dl~~~~~~~~~~~~ 418 (504)
|+..++.+| ..|+.++|++|||+|++|.+.++ ...-+.++...... ...+.|++|.+||. |++..-. ..+
T Consensus 111 GQ~klRplW--r~Yy~~TdglIfVVDSsD~~R~e-ak~EL~eL~~mL~ee~~L~gapLLVlANKqqDlp~Ams----~~E 183 (227)
T 3l82_B 111 SRYSVIPQI--QKVCEVVDGFIYVANAEAHKRHE-WQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMP----CFY 183 (227)
T ss_dssp ------CCH--HHHHHHCSEEEEEEECBTTCCCC-HHHHHHHHHHHSCTTSSCSCSCEEEEEEESSTTSCBCC----HHH
T ss_pred cHHHHHHHH--HHHhcCCCEEEEEeccccHhHHH-HHHHHHHHHHHhcchhhhCCCeEEEEeCCCcCccCCCC----HHH
Confidence 555667888 46999999999999999986554 33333333222111 12589999999995 6754332 334
Q ss_pred HHHHhCCC------CeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 419 VTQELGIE------PPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 419 ~~~~~~~~------~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
+++.+++. .+..|||++ +|+.+-++||.+.+...
T Consensus 184 I~e~L~L~~l~R~W~Iq~csA~TGeGL~EGLdWL~~~l~~k 224 (227)
T 3l82_B 184 LAHELHLNLLNHPWLVQDTEAETLTGFLNGIEWILEEVESK 224 (227)
T ss_dssp HHHHTTGGGGCSCEEEEEEETTTCTTHHHHHHHHTTTTTTC
T ss_pred HHHHcCCcCCCCCEEEEEeECCCCcCHHHHHHHHHHHHHhh
Confidence 44444432 368899999 99999999998776443
No 398
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=98.57 E-value=7e-08 Score=87.11 Aligned_cols=152 Identities=22% Similarity=0.208 Sum_probs=108.2
Q ss_pred CCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcC-CchhHHHHHHhhcCCC
Q 010673 70 MDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKG-RLETTWAVLRKFGYGD 148 (504)
Q Consensus 70 ~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~-~~e~~~~~~~~f~~d~ 148 (504)
+.+.++.+++..++. ...++.+++..+.+.++.++ ++|.|+.++|..++......+ ..+.+..+|+.+|.|+
T Consensus 4 ~~~~l~~~~l~~l~~---~~~~~~~~i~~~f~~fd~~~----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 76 (190)
T 1g8i_A 4 SNSKLKPEVVEELTR---KTYFTEKEVQQWYKGFIKDC----PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENK 76 (190)
T ss_dssp CCCSCCHHHHHHHHH---TSSSCHHHHHHHHHHHHHHC----TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTC
T ss_pred ccccCCHHHHHHHHH---ccCCCHHHHHHHHHHHHHhC----CCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCC
Confidence 456889999988866 34789999999999998762 255699999998877653333 3356889999999999
Q ss_pred CccccCCCC-CCCCCCCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC-------CCCCCCCC-----
Q 010673 149 DLELRDDFL-PVPTKLSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA-------PESPWDEA----- 214 (504)
Q Consensus 149 ~~~i~~~~l-~~~~~~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~-------p~~p~~~~----- 214 (504)
+|.|+.+++ . .+ ..++.. ..+.+..+|+.+|.|++|.|+++||..++... +..|....
T Consensus 77 ~g~i~~~ef~~-~~-------~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 148 (190)
T 1g8i_A 77 DGRIEFSEFIQ-AL-------SVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKR 148 (190)
T ss_dssp SSEEEHHHHHH-HH-------HHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHH
T ss_pred CCeEeHHHHHH-HH-------HHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHH
Confidence 999998888 5 22 111111 13678899999999999999999999988652 11111110
Q ss_pred --ccccccccccCCcccHHHHHHh
Q 010673 215 --PYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 215 --~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
........+..|.|++..|+..
T Consensus 149 ~~~~f~~~D~d~dG~i~~~ef~~~ 172 (190)
T 1g8i_A 149 VDRIFAMMDKNADGKLTLQEFQEG 172 (190)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHH
T ss_pred HHHHHHHhcCCCCCcEeHHHHHHH
Confidence 0112334566788898888654
No 399
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=98.57 E-value=3.8e-08 Score=107.57 Aligned_cols=121 Identities=17% Similarity=0.105 Sum_probs=95.0
Q ss_pred HHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHH
Q 010673 59 LKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTW 138 (504)
Q Consensus 59 l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~ 138 (504)
++++|..+|.|+||.|+.+|+..++... +++..+++.+|.+ ++|.|+.++|..++...-.....+++.
T Consensus 577 ~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~D~d-----~dG~Is~~El~~~L~~~G~~ls~~~~~ 644 (714)
T 3bow_A 577 CKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREIDVD-----RSGTMNSYEMRKALEEAGFKLPCQLHQ 644 (714)
T ss_dssp HHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHHCTT-----CCSSEEHHHHHHHHHHTTEECCHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHhCCC-----CCCeECHHHHHHHHHHcCCCCCHHHHH
Confidence 4567889999999999999998887653 6788888888776 466799999987765433334557899
Q ss_pred HHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 139 AVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 139 ~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.+|+.+| |++|.|+.+++ . .+ . ..+.+.++|+.+|+|++|.|+.+|+..|+.+
T Consensus 645 ~l~~~~D-d~dG~Isf~EF~~-~l----------~--~~~~l~~~F~~~D~d~dG~Is~~el~~l~~~ 698 (714)
T 3bow_A 645 VIVARFA-DDELIIDFDNFVR-CL----------V--RLEILFKIFKQLDPENTGTIQLDLISWLSFS 698 (714)
T ss_dssp HHHHHHS-CTTCEECHHHHHH-HH----------H--HHHHHHHHHSSSCSSCCSEEEEEHHHHHHHH
T ss_pred HHHHHhC-CCCCeEcHHHHHH-HH----------H--HHHHHHHHHHHhCCCCCCcEEHHHHHHHHHH
Confidence 9999999 99999988777 4 11 0 1256788999999999999999999877653
No 400
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=98.57 E-value=2.8e-08 Score=81.23 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=57.2
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
....++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.++.+ ++|.|++++|+.++
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~-----~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND-----GDGKIGADEFQEMV 106 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCS-----SSSSEEHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHH
Confidence 456789999999999999999999998877542 7889999999999999776 46779999998765
No 401
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=98.56 E-value=9.9e-08 Score=89.41 Aligned_cols=111 Identities=13% Similarity=0.026 Sum_probs=85.8
Q ss_pred HHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH---------
Q 010673 59 LKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI--------- 129 (504)
Q Consensus 59 l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~--------- 129 (504)
++++|+.+|.|+||.|+.+|+..++... +...+++++..+++.+|.+ ++|.|+.++|..++....
T Consensus 104 ~~~lf~~~D~d~~G~I~~~Ef~~~l~~~-~~~~~~~~l~~~F~~~D~d-----~dG~Is~~E~~~~l~~~~~~~~~~~~~ 177 (229)
T 3dd4_A 104 AHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDIN-----KDGYITKEEMLDIMKAIYDMMGKCTYP 177 (229)
T ss_dssp HHHHHHTTCSSCCSSCCHHHHHHHHHHH-HHSCHHHHHHHHHHHHCTT-----CSSCCBHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHcCCCCCCeEeHHHHHHHHHHH-cCCChHHHHHHHHHHhCCC-----CCCeECHHHHHHHHHHHHHHhccccCC
Confidence 4689999999999999999999887654 4566788999999999887 577799999998776542
Q ss_pred ---hcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcC
Q 010673 130 ---EKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDI 188 (504)
Q Consensus 130 ---~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~ 188 (504)
.....+++..+|+.+|.|++|.|+.+++ . .+.. ...+.++|+.||.
T Consensus 178 ~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~-~~~~------------~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 178 VLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIE-SCQK------------DENIMRSMQLFEN 227 (229)
T ss_dssp ------CCTHHHHHHHHHCSSCSSBCCHHHHHH-HHHT------------CHHHHHHHHHHTT
T ss_pred CcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHH-HHHh------------CHHHHHHHHhccc
Confidence 1234468999999999999999998877 5 2211 1446777777764
No 402
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=98.54 E-value=8.1e-09 Score=83.55 Aligned_cols=63 Identities=21% Similarity=0.160 Sum_probs=51.0
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++++|+.||.|++|.|+.++| . .+ ..++.... +++.+||+.+|.|+||.|+++||.+||.+
T Consensus 36 ~el~~~F~~~D~d~~G~I~~~El~~-~l-------~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~P 100 (100)
T 2lv7_A 36 EEIREAFKVFDRDGNGFISKQELGT-AM-------RSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGP 100 (100)
T ss_dssp HHHHHHHHHTCSSCSSCBCHHHHHH-HH-------HHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHH-HH-------HHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhCc
Confidence 46899999999999999999998 5 33 12222222 66889999999999999999999998863
No 403
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=98.54 E-value=1.5e-07 Score=86.15 Aligned_cols=94 Identities=10% Similarity=-0.016 Sum_probs=77.8
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-c-----
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-K----- 131 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~----- 131 (504)
.++++|..+|.|+||.|+.+|+..++.. ++...+.+++..+++.+|.+ ++|.|++++|..++..... .
T Consensus 60 ~~~~~f~~~D~d~~G~i~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d-----~~G~I~~~E~~~~l~~~~~~~g~~~~ 133 (204)
T 1jba_A 60 YVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKD-----RNGCIDRQELLDIVESIYKLKKACSV 133 (204)
T ss_dssp HHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSS-----CSSCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHcCCCCCeEeHHHHHHHHHH-HccCCHHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHHHHhCCCCc
Confidence 4678999999999999999999998775 47788999999999999877 5677999999987765422 1
Q ss_pred -----------CCchhHHHHHHhhcCCCCccccCCCC
Q 010673 132 -----------GRLETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 132 -----------~~~e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
...+++..+|+.+|.|++|.|+.+++
T Consensus 134 ~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef 170 (204)
T 1jba_A 134 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170 (204)
T ss_dssp CTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHH
T ss_pred cccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 12256899999999999999987666
No 404
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=98.53 E-value=2.7e-07 Score=79.72 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=57.1
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
...++++|+.||+|+||+|+.+||..++.. +|.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~d-----~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEVDEMIREADID-----GDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSS-----SSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHHc
Confidence 356788999999999999999999999774 69999999999999999776 467799999997763
No 405
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.52 E-value=1.7e-07 Score=70.98 Aligned_cols=61 Identities=13% Similarity=0.013 Sum_probs=49.9
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhh-hhccCCcCCCCCCHHhHHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQ-EKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~-~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..+|+++|+.| +|++|+|+.+||+. ++|++|++.|++.++ .+.++ .++|.|++++|+.++.
T Consensus 9 ~eel~eAFr~f-~dg~G~It~~eLr~--------~lt~eevd~~i~~~d~~dg~~-~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 9 AEQVIASFRIL-ASDKPYILAEELRR--------ELPPDQAQYCIKRMPAYSGPG-SVPGALDYAAFSSALY 70 (75)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHH--------HSCHHHHHHHHHHSCSCCCSS-CCTTCBCHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCcCHHHHHh--------cCCHHHHHHHHHhcCcccCCC-CCCCcCcHHHHHHHHh
Confidence 35789999999 99999999999965 599999999999997 34211 2367799999987653
No 406
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=98.51 E-value=1e-07 Score=95.94 Aligned_cols=123 Identities=17% Similarity=0.199 Sum_probs=83.6
Q ss_pred CChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH----HH
Q 010673 341 IPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ----DS 416 (504)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~----~~ 416 (504)
.+++.+..+. ..++..++++++|+|++++.+ .|...+.+. ..+.|+++|+||+|+.......+ ..
T Consensus 56 ~~~e~f~~~L--~~~~~~~~lil~VvD~~d~~~-----s~~~~l~~~----l~~~piilV~NK~DLl~~~~~~~~~~~~l 124 (369)
T 3ec1_A 56 LDDDDFLSML--HRIGESKALVVNIVDIFDFNG-----SFIPGLPRF----AADNPILLVGNKADLLPRSVKYPKLLRWM 124 (369)
T ss_dssp ---CHHHHHH--HHHHHHCCEEEEEEETTCSGG-----GCCSSHHHH----CTTSCEEEEEECGGGSCTTCCHHHHHHHH
T ss_pred CCHHHHHHHH--HHhhccCcEEEEEEECCCCCC-----chhhHHHHH----hCCCCEEEEEEChhcCCCccCHHHHHHHH
Confidence 3455666665 345688999999999999864 344444444 34789999999999976543322 33
Q ss_pred HHHHHHhCCC--CeEEEeccc-cCHHHHHHHHHHHHhCCCCCCCCcccccchhhHHhhhcc
Q 010673 417 ARVTQELGIE--PPIPVSMKS-KDLNNVFSRIIWAAEHPHLNIPETETGRNRKRYRHLVNS 474 (504)
Q Consensus 417 ~~~~~~~~~~--~~~~vSak~-~gi~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 474 (504)
.++++..+.. .++.+||++ .|++++++.|.+.........-+......+...+.+.+.
T Consensus 125 ~~~~~~~g~~~~~v~~iSA~~g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStliN~L~~~ 185 (369)
T 3ec1_A 125 RRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINRYREGGDVYVVGCTNVGKSTFINRIIEE 185 (369)
T ss_dssp HHHHHTTTCCCSEEEECBTTTTBTHHHHHHHHHHHHTTSCEEEECCTTSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccEEEEECCCCCCHHHHHHHHHhhcccCcEEEEcCCCCchHHHHHHHHhh
Confidence 4446667763 479999999 999999999988775554444445555555556665554
No 407
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=98.51 E-value=9.1e-08 Score=86.37 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=90.1
Q ss_pred HHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHH-----------HhcCCchhHHHHHHhhcCCCCccccCCCC-CCC
Q 010673 93 PAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALF-----------IEKGRLETTWAVLRKFGYGDDLELRDDFL-PVP 160 (504)
Q Consensus 93 ~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~-----------~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~ 160 (504)
.+++..+...+|.+ ++|.|++++|..++... -.....+++..+|+.+|.|++|.|+.+++ . .
T Consensus 39 ~~~l~~~F~~~D~d-----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~-~ 112 (191)
T 3khe_A 39 TKELTQIFRQLDNN-----GDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVT-V 112 (191)
T ss_dssp THHHHHHHHHHCTT-----CSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHH-H
T ss_pred HHHHHHHHHHHcCC-----CCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHH-H
Confidence 34566666666655 46669999999777654 11223457899999999999999998887 5 2
Q ss_pred CCCCCCCccccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCC-CCCCccccccccccCCcccHHHHHHhhh
Q 010673 161 TKLSPDQSVELAS-EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP-WDEAPYKDAAETTALGNLTLKGFVSKWA 238 (504)
Q Consensus 161 ~~~~~~~~~~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p-~~~~~~~~~~~~~~~g~i~~~~~l~~w~ 238 (504)
+. .... ...+.+..+|+.+|.|++|.|+.+||..++. ...++ ..-.........+..|.|++..|+..+.
T Consensus 113 ~~-------~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~-~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 184 (191)
T 3khe_A 113 CM-------DKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG-VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184 (191)
T ss_dssp HS-------CHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT-SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HH-------HhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc-cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 20 1111 1127789999999999999999999999998 22222 0000122334456789999999976643
No 408
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=98.50 E-value=8e-08 Score=86.03 Aligned_cols=135 Identities=10% Similarity=-0.017 Sum_probs=87.9
Q ss_pred HHHHHHHHh-hhhccCCcCCCCCCHHhHHHHHHHHH----hcCCchhHH-----------HHHHhhcCCCCccccCCCC-
Q 010673 95 EIVGVKRVV-QEKQHDGVNDLGLTLSGFLFLHALFI----EKGRLETTW-----------AVLRKFGYGDDLELRDDFL- 157 (504)
Q Consensus 95 e~~~~~~~~-~~~~~~~~~~~~i~~~~Fl~l~~~~~----~~~~~e~~~-----------~~~~~f~~d~~~~i~~~~l- 157 (504)
++..++..+ |.+ ++|.|++++|..++.... .....+++. .+|+.+|.|++|.|+.+++
T Consensus 9 ~l~~~F~~~~D~d-----~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~ 83 (185)
T 2sas_A 9 KIKFTFDFFLDMN-----HDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL 83 (185)
T ss_dssp HHHHHHHHHTCTT-----CSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred HHHHHHHHheeCC-----CCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence 455666667 766 466799999987766544 233333443 3499999999999998887
Q ss_pred CCCCCCCCCC---ccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCC-CCCCccccccccccCCcccHHHH
Q 010673 158 PVPTKLSPDQ---SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP-WDEAPYKDAAETTALGNLTLKGF 233 (504)
Q Consensus 158 ~~~~~~~~~~---~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p-~~~~~~~~~~~~~~~g~i~~~~~ 233 (504)
. .+...... ...........+..+|+.+|.|+||.|+.+||..++.... ++ ..-.........+..|.|++..|
T Consensus 84 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g-~~~~~~~~~~~~~D~d~dG~i~~~ef 161 (185)
T 2sas_A 84 A-MWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ-LQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp H-HHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC-CCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred H-HHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC-CCHHHHHHHHHHhcCCCCCcCcHHHH
Confidence 5 22110000 0011112237789999999999999999999999987542 33 11111223445667899999888
Q ss_pred HHh
Q 010673 234 VSK 236 (504)
Q Consensus 234 l~~ 236 (504)
+..
T Consensus 162 ~~~ 164 (185)
T 2sas_A 162 KEL 164 (185)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 409
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=98.50 E-value=2.3e-07 Score=80.09 Aligned_cols=65 Identities=22% Similarity=0.288 Sum_probs=58.7
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...++++|+.||.|+||.|+.+||..++...+|.++++++++.++..++.+ ++|.|++++|+.++
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~ 151 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLN-----GDGRVDFEEFVRMM 151 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSS-----SSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCC-----CCCeEeHHHHHHHH
Confidence 467899999999999999999999999887689999999999999999876 46779999998764
No 410
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=98.49 E-value=1.2e-07 Score=90.48 Aligned_cols=94 Identities=15% Similarity=0.042 Sum_probs=78.9
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc-C----
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK-G---- 132 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~-~---- 132 (504)
.++++|..+|.|+||.|+.+|+..++... +...+++++..+++.+|.+ ++|.|++++|..++...... |
T Consensus 130 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~-~~~~~~~~l~~~F~~~D~d-----~dG~I~~~Ef~~~l~~~~~~~g~~~~ 203 (256)
T 2jul_A 130 YAHFLFNAFDADGNGAIHFEDFVVGLSIL-LRGTVHEKLKWAFNLYDIN-----KDGCITKEEMLAIMKSIYDMMGRHTY 203 (256)
T ss_dssp HHHHHHHHSSCSCCSEECSHHHHHHHHHH-HSCCHHHHHHHHHHHTCCS-----SSSCBCHHHHHHHHHHHHHHCCCCCS
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHH-hccChHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHHHHhCCCCC
Confidence 46789999999999999999999987754 6778899999999999876 57779999999877655421 2
Q ss_pred -------CchhHHHHHHhhcCCCCccccCCCC
Q 010673 133 -------RLETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 133 -------~~e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
..+++..+|+.+|.|++|.|+.+++
T Consensus 204 ~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef 235 (256)
T 2jul_A 204 PILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235 (256)
T ss_dssp CCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHH
T ss_pred cccchhhHHHHHHHHHHHHCCCCCCcEeHHHH
Confidence 2367999999999999999998877
No 411
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=98.48 E-value=1e-07 Score=86.55 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=95.4
Q ss_pred HcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCC
Q 010673 86 CFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLS 164 (504)
Q Consensus 86 ~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~ 164 (504)
.+...++++++..+......-+.+ ++|.|+.++|..++...-.... +++..+|+.+|.|++|.|+.+++ . .+.
T Consensus 41 ~~~~~l~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~-~~~-- 114 (191)
T 3k21_A 41 IIAQQSNDYDVEKLKSTFLVLDED--GKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIA-AAL-- 114 (191)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHH-HHS--
T ss_pred HHHHHCCHHHHHHHHHHHHHHCCC--CCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHH-HHH--
Confidence 344556777777776666554322 3666999999977765422233 78999999999999999998887 5 220
Q ss_pred CCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccC-CCCCCCC------CccccccccccCCcccHHHHHHh
Q 010673 165 PDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTA-PESPWDE------APYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 165 ~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~-p~~p~~~------~~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
.......+.+..+|+.+|.|++|.|+.+||..++... .+.+... .........+..|.|++..|+..
T Consensus 115 -----~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~ 188 (191)
T 3k21_A 115 -----DRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEM 188 (191)
T ss_dssp -----CGGGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHH
T ss_pred -----hhhhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHH
Confidence 1111123678899999999999999999999999753 2222111 01223445667899999998655
No 412
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=98.48 E-value=1.3e-07 Score=85.10 Aligned_cols=67 Identities=18% Similarity=0.156 Sum_probs=57.9
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCC-C------CHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAP-L------QPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~-~------~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||+|+.+||..+++..+|.+ + ++++++.++..++.+ ++|.|++++|+.++.
T Consensus 96 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d-----~dG~I~~~EF~~~~~ 169 (179)
T 3a8r_A 96 FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPT-----NLGYIEMEDLEALLL 169 (179)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTT-----CCSEECHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHH
Confidence 346799999999999999999999999987356777 7 899999999999877 466799999998765
No 413
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=98.45 E-value=1.9e-07 Score=79.93 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=57.5
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|+||+|+.+||..++. .+|.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 76 ~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~~~~~~~~~~D~d-----~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 76 DVIRNAFACFDEEASGFIHEDHLRELLT-TMGDRFTDEEVDEMYREAPID-----KKGNFNYVEFTRILK 139 (143)
T ss_dssp HHHHHHHTTSCSSSCCCCCTTTHHHHHH-TSSSCCCHHHHHHHHHHTTCC-----SSSCCCSTHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCC-----CCCcCcHHHHHHHHh
Confidence 5688999999999999999999999977 569999999999999999876 477799999997764
No 414
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.45 E-value=1.8e-07 Score=75.96 Aligned_cols=64 Identities=27% Similarity=0.342 Sum_probs=52.6
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHH----HcCCCCCH-----------HHHHHHHHHhhhhccCCcCCCCCCHHhHH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVK----CFNAPLQP-----------AEIVGVKRVVQEKQHDGVNDLGLTLSGFL 122 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~----~~g~~~~~-----------~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl 122 (504)
.++++|.+||.|+||+|+.+||..++.. .+|..++. ..+..++..++.+ ++|.|++++|+
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d-----~dG~Is~~EF~ 95 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTN-----QDRLVTLEEFL 95 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSS-----CSSEEEHHHHH
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCC-----CCCcCCHHHHH
Confidence 4788999999999999999999999886 67877764 2478888888766 46669999998
Q ss_pred HHHH
Q 010673 123 FLHA 126 (504)
Q Consensus 123 ~l~~ 126 (504)
.++.
T Consensus 96 ~~~~ 99 (103)
T 1snl_A 96 ASTQ 99 (103)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7653
No 415
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=98.45 E-value=2.5e-07 Score=80.90 Aligned_cols=64 Identities=11% Similarity=0.156 Sum_probs=56.6
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHH--HhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKR--VVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~--~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|+||+|+.+||..++. .+|.++++++++.++. .++.+ ++|.|++++|+.++.
T Consensus 85 ~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~~~~~~~~~~~~D~d-----~dg~i~~~eF~~~~~ 150 (159)
T 2ovk_C 85 DEFMEAFKTFDREGQGLISSAEIRNVLK-MLGERITEDQCNDIFTFCDIRED-----IDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHHHHHHHHTCTTSSSEECHHHHHHHHH-HSSSCCCHHHHHHHHHHTTCCCC-----TTCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhcCCCC-----CCCcEeHHHHHHHHh
Confidence 4678899999999999999999999987 4699999999999999 77776 467799999997764
No 416
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=98.44 E-value=3.1e-08 Score=90.57 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCC
Q 010673 89 APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQ 167 (504)
Q Consensus 89 ~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~ 167 (504)
..++++++..+.+....-+.+ ++|.|++++|..+....-.....+++..+|+.+|.|++|.|+.+++ . .+
T Consensus 49 ~~l~~~e~~~l~~~F~~~D~d--~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~-~~------ 119 (197)
T 3pm8_A 49 KHLCDVEINNLRNIFIALDVD--NSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLA-AT------ 119 (197)
T ss_dssp HHCCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHH-TT------
T ss_pred HHCCHHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH-HH------
Confidence 346777777666665544222 3666999999977765422345578999999999999999998888 5 22
Q ss_pred ccccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCC-CCCCCC---CccccccccccCCcccHHHHHHhh
Q 010673 168 SVELAS-EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAP-ESPWDE---APYKDAAETTALGNLTLKGFVSKW 237 (504)
Q Consensus 168 ~~~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p-~~p~~~---~~~~~~~~~~~~g~i~~~~~l~~w 237 (504)
..+.. ...+.+..+|+.+|.|++|.|+.+||..++.... +.+... .........+..|.|++..|+..+
T Consensus 120 -~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 193 (197)
T 3pm8_A 120 -IDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193 (197)
T ss_dssp -CCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred -HHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence 01111 1126789999999999999999999999998652 111000 012233445678999999996553
No 417
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=98.42 E-value=3.8e-07 Score=80.34 Aligned_cols=65 Identities=14% Similarity=0.184 Sum_probs=57.8
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
..++++|+.||.|+||+|+.+||..++. .+|.++++++++.++..++.+ ++|.|++++|+.++..
T Consensus 95 ~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~D~d-----~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 95 DVIMGAFKVLDPDGKGSIKKSFLEELLT-TGGGRFTPEEIKNMWAAFPPD-----VAGNVDYKNICYVITH 159 (166)
T ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHH-HcCCCCCHHHHHHHHHhcCCC-----CCCeEeHHHHHHHHHh
Confidence 5688999999999999999999999987 469999999999999999776 4677999999977653
No 418
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=98.41 E-value=3e-07 Score=84.53 Aligned_cols=67 Identities=13% Similarity=0.209 Sum_probs=58.8
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHH----HHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGV----KRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~----~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||+|+.+||..++..++|.++++++++.+ +..+|.+ ++|.|++++|+.++.
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d-----~dG~Is~~EF~~~~~ 181 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQD-----GDSAISFTEFVKVLE 181 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSS-----SSSSEEHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHh
Confidence 567899999999999999999999999988777999999999998 7778766 467799999987653
No 419
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.41 E-value=3.4e-07 Score=78.25 Aligned_cols=94 Identities=10% Similarity=0.008 Sum_probs=78.5
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
.+.++|+.+|.|+||.|+.+|+..++..........+.+..+++.+|.+ ++|.|+.++|..+....-..-..+++
T Consensus 43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~i~~~el~~~l~~~g~~~~~~~~ 117 (142)
T 2bl0_C 43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPE-----GTGYIPKAALQDALLNLGDRLKPHEF 117 (142)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCS-----SCSCEEHHHHHHHHHHSSSCCCHHHH
T ss_pred HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCC-----CCCcCcHHHHHHHHHHcCCCCCHHHH
Confidence 4678999999999999999999998887667778899999999999876 46779999999777643223345789
Q ss_pred HHHHHhhcCCCCccccCCCC
Q 010673 138 WAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l 157 (504)
..+|+.+| |++|.|+.+++
T Consensus 118 ~~~~~~~d-~~dg~i~~~eF 136 (142)
T 2bl0_C 118 AEFLGITE-TEKGQIRYDNF 136 (142)
T ss_dssp HHHHHHHC-CSSSEECSHHH
T ss_pred HHHHHHhC-CCCCcEeHHHH
Confidence 99999999 99999998776
No 420
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=98.41 E-value=3.1e-08 Score=83.56 Aligned_cols=130 Identities=13% Similarity=0.096 Sum_probs=88.6
Q ss_pred HHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChh
Q 010673 96 IVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASE 174 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~ 174 (504)
+..+...++.+ ++|.|++++|..++.........+++..+|+.+|.|++|.|+.+++ . .+..-.. .....
T Consensus 2 l~~~F~~~D~~-----~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~-~~~~~~~---~~~~~ 72 (134)
T 1jfj_A 2 AEALFKEIDVN-----GDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK-FYGSIQG---QDLSD 72 (134)
T ss_dssp HHHHHHHHCTT-----CSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHH-HTTCSSC---CSSHH
T ss_pred HHHHHHHHCCC-----CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHH-HHHHhcc---cccCC
Confidence 56677778766 4666999999977654322223467899999999999999999888 5 3311000 01112
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCCCCCCccccccccccCCcccHHHHHHh
Q 010673 175 AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 175 ~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p~~~~~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
..+.+..+|+.+|.|++|.|+.+||..++........ .........+..|.|++..|+..
T Consensus 73 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~~--~~~~~~~D~~~dg~i~~~ef~~~ 132 (134)
T 1jfj_A 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKV--AEQVMKADANGDGYITLEEFLEF 132 (134)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHHH--HHHHHHHHCSSSSEEEHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHHH--HHHHHHhCCCCCCcEeHHHHHHH
Confidence 2356999999999999999999999999985422110 11223334567889998888643
No 421
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=98.40 E-value=3.9e-07 Score=91.21 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=57.5
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..|+++|+.||+|+||+|+.+||..++.. +|.+++++|++.|++.+|.+ ++|.|+++||+.++.
T Consensus 375 eeLreAFk~fDkDgdG~IS~eELr~vL~~-lGe~LSdeEIdeLfke~D~D-----gDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 375 EEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADID-----GDGQVNYEEFVQMMT 438 (440)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTT-----CSSSEEHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCcCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcEeHHHHHHHhC
Confidence 56899999999999999999999999774 69999999999999999877 467799999998763
No 422
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=98.40 E-value=3e-07 Score=81.56 Aligned_cols=98 Identities=10% Similarity=0.040 Sum_probs=76.5
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCC-------HHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQ-------PAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~-------~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
......++++|..+|.|+||.|+.+|+..++......... .+.+..+++.+|.+ ++|.|+.++|..++
T Consensus 54 ~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~I~~~e~~~~l 128 (176)
T 1nya_A 54 NAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKN-----ADGQINADEFAAWL 128 (176)
T ss_dssp HHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSS-----CCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCC-----CCCCCCHHHHHHHH
Confidence 3334455699999999999999999999988776554433 36688888888776 46669999999776
Q ss_pred HHHHhcCCchhHHHHHHhhcCCCCccccCCCC
Q 010673 126 ALFIEKGRLETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 126 ~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
... + ...+++..+|+.+|.|++|.|+.+++
T Consensus 129 ~~~-g-~~~~~~~~~~~~~D~d~dg~i~~~ef 158 (176)
T 1nya_A 129 TAL-G-MSKAEAAEAFNQVDTNGNGELSLDEL 158 (176)
T ss_dssp HHT-T-CCHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred HHh-C-CCHHHHHHHHHHhCCCCCCCCcHHHH
Confidence 543 2 44578999999999999999987665
No 423
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=98.39 E-value=4.5e-07 Score=79.00 Aligned_cols=95 Identities=8% Similarity=0.010 Sum_probs=79.3
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCC----CCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCC
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAP----LQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGR 133 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~----~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~ 133 (504)
.+.++|+.+|.|+||.|+.+|+..++....... ...+.+..+++.+|.+ ++|.|+.++|..++...-..-.
T Consensus 51 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~I~~~el~~~l~~~g~~~~ 125 (158)
T 2jnf_A 51 TIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKE-----GNGYISTDVMREILAELDETLS 125 (158)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSS-----SSSSEEHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCC-----CCCeEcHHHHHHHHHHhCCcCC
Confidence 467899999999999999999999888776655 6778899999999877 4667999999987765433345
Q ss_pred chhHHHHHHhhcCCCCccccCCCC
Q 010673 134 LETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 134 ~e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
.+++..+|+.+|.|++|.|+.+++
T Consensus 126 ~~~~~~~~~~~D~d~dg~i~~~eF 149 (158)
T 2jnf_A 126 SEDLDAMIDEIDADGSGTVDFEEF 149 (158)
T ss_dssp HHHHHHHHHHHCSSCCSEECSHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHH
Confidence 578999999999999999998766
No 424
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=98.36 E-value=3e-07 Score=79.22 Aligned_cols=64 Identities=14% Similarity=0.194 Sum_probs=56.5
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|+||.|+.+||..++. .+|.++++++++.+++.++.+ ++|.|++++|+.++.
T Consensus 83 ~~~~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~d~d-----~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 83 EDFVKAFQVFDKESTGKVSVGDLRYMLT-GLGEKLTDAEVDELLKGVEVD-----SNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHH-HSTTCCCHHHHHHHHTTCCCC-----TTSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCC-----CCCeEeHHHHHHHHh
Confidence 5688999999999999999999999987 469999999999999998766 466699999997754
No 425
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=98.36 E-value=7.5e-08 Score=78.62 Aligned_cols=65 Identities=23% Similarity=0.260 Sum_probs=56.5
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHc--CCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCF--NAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~--g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|+||+|+.+||..++.... |.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 41 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d-----~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 41 SQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHD-----GDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCS-----SSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHh
Confidence 4588999999999999999999999987653 8899999999999998766 467799999997653
No 426
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=98.35 E-value=4.1e-07 Score=83.12 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=59.5
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHH----hhhhccCCcCCCCCCHHhHHHHHH
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRV----VQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~----~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
......++++|+.||.|+||+|+.+||..++...+|.++++++++.++.. ++.+ ++|.|++++|+.++.
T Consensus 110 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d-----~dG~Is~~EF~~~~~ 182 (202)
T 2bec_A 110 NSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADED-----GDGAVSFVEFTKSLE 182 (202)
T ss_dssp TSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSS-----CSSSEEHHHHHHTTT
T ss_pred ccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCC-----CCCcCcHHHHHHHHH
Confidence 44567799999999999999999999999988655999999999999998 7666 467799999987653
No 427
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=98.35 E-value=8.1e-07 Score=79.95 Aligned_cols=64 Identities=19% Similarity=0.165 Sum_probs=57.1
Q ss_pred HhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh
Q 010673 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE 130 (504)
Q Consensus 61 ~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~ 130 (504)
++|+.||+|+||+|+.+||..++.. +|.++++++++.++..++.+ ++|.|++++|+.++..+..
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~-~g~~~~~~~~~~~~~~~D~d-----~dG~i~~~eF~~~~~~~~~ 176 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKA-AGIIQSSEDCEETFRVCDID-----ESGQLDVDEMTRQHLGFWY 176 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHH-HTSCCSHHHHHHHHHHSCCC-----TTSCEEHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHhc
Confidence 8999999999999999999999874 69999999999999999876 4677999999988776553
No 428
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=98.35 E-value=2.2e-07 Score=84.83 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccC
Q 010673 94 AEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELA 172 (504)
Q Consensus 94 ~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~ 172 (504)
+++..+...+|.+ ++|.|+.++|..+....-.....+++..+|+.+|.|++|.|+.+++ . .+.. ...
T Consensus 37 ~~l~~~F~~~D~d-----~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~-~~~~------~~~ 104 (204)
T 3e3r_A 37 QGLARFFRQLDRD-----GSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLR-ALRP------PMS 104 (204)
T ss_dssp ---CHHHHHHCTT-----CCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH-HTSC------CCC
T ss_pred HHHHHHHHHHccC-----CCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHH-HHHh------hcC
Confidence 3456667777666 4777999999877654422345578999999999999999998888 5 3311 122
Q ss_pred hhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCC--C---CCCC----cccccccc-ccCCcccHHHHHHhhhhh
Q 010673 173 SEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPES--P---WDEA----PYKDAAET-TALGNLTLKGFVSKWALM 240 (504)
Q Consensus 173 ~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~--p---~~~~----~~~~~~~~-~~~g~i~~~~~l~~w~~~ 240 (504)
....+.+..+|+.+|.|++|.|+.+||..++...... . +... .+...... +..|.|++..|+..+...
T Consensus 105 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~ 182 (204)
T 3e3r_A 105 QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGV 182 (204)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHc
Confidence 2334789999999999999999999999999854211 0 1100 11223344 778999999997665443
No 429
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=98.35 E-value=1.3e-06 Score=77.18 Aligned_cols=67 Identities=19% Similarity=0.189 Sum_probs=58.1
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
....++++|+.||+|+||+|+.+||..++... | +++++++.++..++.+ ++|.|++++|+.++..+.
T Consensus 92 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g--~~~~~~~~~~~~~D~d-----~dg~i~~~ef~~~~~~~~ 158 (174)
T 1q80_A 92 VEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-G--LDKTMAPASFDAIDTN-----NDGLLSLEEFVIAGSDFF 158 (174)
T ss_dssp HHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-T--CCGGGHHHHHHHHCTT-----CSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-C--CCHHHHHHHHHHhCCC-----CCceEeHHHHHHHHHHHh
Confidence 34678999999999999999999999998865 5 8999999999999877 477799999998876544
No 430
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=98.34 E-value=9e-07 Score=76.65 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=76.6
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cCCchh
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KGRLET 136 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~~~e~ 136 (504)
.+.++|..+|.|+||.|+.+|+..++..........+.+..+++.+|.+ ++|.|+.++|..++....+ ....++
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~i~~~e~~~~l~~~~~~~~~~~~ 113 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMD-----KDGYISNGELFQVLKMMVGNNLKDTQ 113 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTT-----CSSCBCHHHHHHHHHHHHGGGSCHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHhccCCCHHH
Confidence 5678999999999999999999888775544456678899999999877 5677999999988776433 445567
Q ss_pred HHHHHHh----hcCCCCccccCCCC
Q 010673 137 TWAVLRK----FGYGDDLELRDDFL 157 (504)
Q Consensus 137 ~~~~~~~----f~~d~~~~i~~~~l 157 (504)
+..+++. +|.|++|.|+.+++
T Consensus 114 ~~~~~~~~~~~~D~~~dg~i~~~eF 138 (155)
T 3ll8_B 114 LQQIVDKTIINADKDGDGRISFEEF 138 (155)
T ss_dssp HHHHHHHHHHHHCTTSSSSBCHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 7777777 99999999986655
No 431
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=98.34 E-value=2.5e-07 Score=81.60 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=61.8
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
.+.++|..+|.|+||.|+.+|+..++....+.....+++..+.+.+|.+ ++|.|+.++|..+....-..-..+++
T Consensus 65 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~i~~~el~~~l~~~g~~~~~~~~ 139 (169)
T 3qrx_A 65 EIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDD-----NSGTITIKDLRRVAKELGENLTEEEL 139 (169)
T ss_dssp HHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHHcCCCCCHHHH
Confidence 4566777777777777877777776655444444455666667666655 35567777777665543223344567
Q ss_pred HHHHHhhcCCCCccccCCCC
Q 010673 138 WAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l 157 (504)
..+|+.+|.|++|.|+.+++
T Consensus 140 ~~~~~~~D~~~dg~i~~~eF 159 (169)
T 3qrx_A 140 QEMIAEADRNDDNEIDEDEF 159 (169)
T ss_dssp HHHHHHHCCSSSSCBCHHHH
T ss_pred HHHHHHhCCCCCCCEeHHHH
Confidence 77777777777777776554
No 432
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=98.34 E-value=6.8e-07 Score=76.79 Aligned_cols=65 Identities=14% Similarity=0.191 Sum_probs=56.8
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||+|+||.|+.+||..++.. +|.++++++++.++.. +.+ ++|.|++++|+.++.
T Consensus 83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~-d~~-----~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLAT-LGEKMTEEEVEELMKG-QED-----SNGCINYEAFVKHIM 147 (149)
T ss_pred hHHHHHHHHHHhCCCCCceEcHHHHHHHHHH-hCCCCCHHHHHHHHhh-CCC-----CCCcEeHHHHHHHHh
Confidence 3567899999999999999999999999875 5999999999999998 766 467799999997653
No 433
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=98.34 E-value=1.4e-06 Score=75.99 Aligned_cols=66 Identities=21% Similarity=0.294 Sum_probs=58.2
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||.|+||.|+.+|+..++. .+|.+++++++..++..++.+ ++|.|++++|+.++.
T Consensus 94 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~-~~g~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~ 159 (162)
T 1top_A 94 SEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHVTEEDIEDLMKDSDKN-----NDGRIDFDEFLKMME 159 (162)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHH-TTTCCCCHHHHHHHHHHHCTT-----CSSSBCHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHh
Confidence 456789999999999999999999999976 569999999999999999876 467799999997654
No 434
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=98.33 E-value=5.9e-07 Score=78.15 Aligned_cols=65 Identities=15% Similarity=0.220 Sum_probs=57.1
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHH--hhhhccCCcCCCCCCHHhHHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRV--VQEKQHDGVNDLGLTLSGFLFLHAL 127 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~--~~~~~~~~~~~~~i~~~~Fl~l~~~ 127 (504)
..++++|+.||.|+||.|+.+||..++. .+|.++++++++.++.. ++.+ ++|.|++++|+.++..
T Consensus 84 ~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~~~D~d-----~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 84 ADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIKLTDLQED-----LEGNVKYEDFVKKVMA 150 (156)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHH-HSSSCCCHHHHHHHHHHHTCCCC-----TTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCC-----CCCcEeHHHHHHHHhc
Confidence 5688999999999999999999999977 56999999999999999 8765 4666999999977653
No 435
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.33 E-value=4.2e-07 Score=77.78 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=57.8
Q ss_pred HHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 55 CVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
....++++|+.||.|+||.|+.+|+..++. .+|.++++++++.++..++.+ ++|.|++++|+.++.
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~g~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~ 139 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLL-NLGDALTSSEVEELMKEVSVS-----GDGAINYESFVDMLV 139 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHH-HSSSCCCHHHHHHHHTTCCCC-----TTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCC-----CCCcEeHHHHHHHHH
Confidence 456789999999999999999999999987 469999999999999988766 466699999997765
No 436
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=98.33 E-value=5.5e-07 Score=84.09 Aligned_cols=138 Identities=9% Similarity=-0.033 Sum_probs=87.5
Q ss_pred cCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHH-HHHHHHh-cCCchhHHHHHHhh---------cCCCCccccCC
Q 010673 87 FNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLF-LHALFIE-KGRLETTWAVLRKF---------GYGDDLELRDD 155 (504)
Q Consensus 87 ~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~-l~~~~~~-~~~~e~~~~~~~~f---------~~d~~~~i~~~ 155 (504)
+...++++++..+......-+.+ ++|.|+.++|.. +... ++ ....+++..+++.+ |.|++|.|+.+
T Consensus 41 l~~~ls~~~~~~l~~~F~~~D~d--~dG~Is~~El~~~l~~~-lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~ 117 (226)
T 2lvv_A 41 IPRDKDAESKSRRIELFKQFDTN--GTGKLGFREVLDGCYGI-LKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLV 117 (226)
T ss_dssp SCSSCCHHHHHHHHHHHHHHGGG--SCSCBCSHHHHHHHHHT-TCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCB
T ss_pred hchhCCHHHHHHHHHHHHHHCCC--CCCcCcHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHH
Confidence 44556666655555444332221 467799999997 4443 22 22334455555555 99999999988
Q ss_pred CC-CCCCCCCCCCccccChhH--HHHHHHhhhhhcCCCCCCCCHHHHhhhhccC--CCCCCCC-CccccccccccCCccc
Q 010673 156 FL-PVPTKLSPDQSVELASEA--VEFLRGIFGLYDIDNDGAVRPAELEDLFLTA--PESPWDE-APYKDAAETTALGNLT 229 (504)
Q Consensus 156 ~l-~~~~~~~~~~~~~l~~~~--~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~--p~~p~~~-~~~~~~~~~~~~g~i~ 229 (504)
++ . .. ...... .+.+..+|+.+|+|++|.|+.+||..++... .+.+-.. .........+..|.|+
T Consensus 118 EF~~-~~--------~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is 188 (226)
T 2lvv_A 118 EFLE-FR--------LMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVT 188 (226)
T ss_dssp CHHH-HH--------HHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEE
T ss_pred HHHH-HH--------HHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEe
Confidence 87 4 11 111111 2578999999999999999999999998743 1222111 1223344567789999
Q ss_pred HHHHHHh
Q 010673 230 LKGFVSK 236 (504)
Q Consensus 230 ~~~~l~~ 236 (504)
+..|+..
T Consensus 189 ~~EF~~~ 195 (226)
T 2lvv_A 189 FDEFSCW 195 (226)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999655
No 437
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=98.32 E-value=7.6e-07 Score=76.53 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=54.9
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...++++|+.||+|+||.|+.+||..++.. +|.++++++++.++..+ + ++|.|++++|+.++
T Consensus 83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~--d-----~dg~i~~~eF~~~l 144 (146)
T 2qac_A 83 VEELIKMFAHFDNNCTGYLTKSQMKNILTT-WGDALTDQEAIDALNAF--S-----SEDNIDYKLFCEDI 144 (146)
T ss_dssp HHHHHHHHHTTCTTCSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHHHH--C-----SSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-hCCCCCHHHHHHHHHHc--C-----CCCcCcHHHHHHHH
Confidence 456889999999999999999999999774 69999999999999998 4 46679999999765
No 438
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=98.32 E-value=1e-07 Score=85.63 Aligned_cols=125 Identities=11% Similarity=0.073 Sum_probs=81.9
Q ss_pred HHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChh
Q 010673 96 IVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASE 174 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~ 174 (504)
+..+...+|.+ ++|.|+.++|..++... + -..+++..+|+.+|.|++|.|+.+++ . .+.... ..
T Consensus 41 l~~~F~~~D~d-----~~G~i~~~El~~~l~~~-g-~~~~~~~~~~~~~D~d~~g~i~~~Ef~~-~~~~~~-------~~ 105 (180)
T 3mse_B 41 INELFYKLDTN-----HNGSLSHREIYTVLASV-G-IKKWDINRILQALDINDRGNITYTEFMA-GCYRWK-------NI 105 (180)
T ss_dssp HHHHHHHHCTT-----CSSSEEHHHHHHHHHHT-T-CCHHHHHHHHHHHCTTCCSEECHHHHHH-HHSCCT-------TC
T ss_pred HHHHHHHhCCC-----CCCcCCHHHHHHHHHHc-C-CCHHHHHHHHHHhCCCCCCcCcHHHHHH-HHHhcc-------cC
Confidence 34444555544 46779999999776532 1 23467999999999999999998887 5 321111 11
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCCCC-CCccccccccccC--------CcccHHHHHHh
Q 010673 175 AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWD-EAPYKDAAETTAL--------GNLTLKGFVSK 236 (504)
Q Consensus 175 ~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p~~-~~~~~~~~~~~~~--------g~i~~~~~l~~ 236 (504)
..+.+..+|+.+|.|++|.|+.+||..++.. ..++-. -.........+.. |.|++..|+..
T Consensus 106 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~ 175 (180)
T 3mse_B 106 ESTFLKAAFNKIDKDEDGYISKSDIVSLVHD-KVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDY 175 (180)
T ss_dssp --CHHHHHHHHHCTTCSSCBCHHHHHHHTTT-SSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCCCCHHHHHHHHcC-CCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHH
Confidence 1256889999999999999999999999982 222200 0011122233334 88999999655
No 439
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=98.31 E-value=9.5e-07 Score=79.84 Aligned_cols=64 Identities=17% Similarity=0.118 Sum_probs=52.8
Q ss_pred HhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh
Q 010673 61 RIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE 130 (504)
Q Consensus 61 ~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~ 130 (504)
++|+.||+|+||.|+.+||..++.. +|.++++++++.++..++.+ ++|.|++++|+.++..+..
T Consensus 117 ~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~D~d-----~dg~i~~~eF~~~~~~~~~ 180 (195)
T 1qv0_A 117 AVFDIFDKDGSGTITLDEWKAYGKI-SGISPSQEDCEATFRHCDLD-----NAGDLDVDEMTRQHLGFWY 180 (195)
T ss_dssp HHHHHTC----CEECHHHHHHHHHH-HSSCCCHHHHHHHHHHSCCC-----TTSCEEHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHHHcc
Confidence 8999999999999999999999875 59999999999999999876 4777999999988766543
No 440
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=98.31 E-value=4.5e-07 Score=79.10 Aligned_cols=95 Identities=9% Similarity=0.034 Sum_probs=68.0
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
.+.++|..+|.|+||.|+.+|+..++..........+++..+.+.+|.+ ++|.|+.++|..+...+-..-..+++
T Consensus 60 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~i~~~el~~~l~~~~~~~~~~~~ 134 (161)
T 3fwb_A 60 EILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDD-----HTGKISIKNLRRVAKELGETLTDEEL 134 (161)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTT-----CSSEECHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCC-----CCCeEeHHHHHHHHHHhCCCCCHHHH
Confidence 4566788888888888888888777665555556677778888887766 35568888887766543333345678
Q ss_pred HHHHHhhcCCCCccccCCCC
Q 010673 138 WAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l 157 (504)
..+|+.+|.|++|.|+.+++
T Consensus 135 ~~~~~~~d~~~~g~i~~~eF 154 (161)
T 3fwb_A 135 RAMIEEFDLDGDGEINENEF 154 (161)
T ss_dssp HHHHHTTCSSSSSSEEHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHH
Confidence 88888888888888775544
No 441
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=98.31 E-value=2.5e-06 Score=76.89 Aligned_cols=70 Identities=10% Similarity=0.139 Sum_probs=59.5
Q ss_pred HHHHHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh
Q 010673 53 PRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE 130 (504)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~ 130 (504)
......++++|+.||+|+||.|+.+|+..++. .+| +++++++.+++.++.+ ++|.|++++|+.++..+..
T Consensus 105 ~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~-~~g--~~~~~~~~~~~~~D~d-----~dG~i~~~Ef~~~~~~~~~ 174 (191)
T 2ccm_A 105 EWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYM-SYG--IPKSDCDAAFDTLSDG-----GKTMVTREIFARLWTEYFV 174 (191)
T ss_dssp HHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHH-TTT--CCHHHHHHHHHHHTTT-----TTSCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HhC--CCHHHHHHHHHHhCCC-----CCCCcCHHHHHHHHHHHhc
Confidence 33456789999999999999999999999876 446 9999999999999887 5777999999988776654
No 442
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.29 E-value=2.3e-07 Score=101.40 Aligned_cols=131 Identities=6% Similarity=0.036 Sum_probs=90.8
Q ss_pred hhcCCCCCccCHHHHHHHHHHHcCCCCCH-HHHHHHHHHhhhhc--cCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHH
Q 010673 65 ICDHDMDGALNDAELNEFQVKCFNAPLQP-AEIVGVKRVVQEKQ--HDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVL 141 (504)
Q Consensus 65 ~~D~d~dG~l~~~El~~~~~~~~g~~~~~-~e~~~~~~~~~~~~--~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~ 141 (504)
.||+|+||.|+.+||...+ ....++ .++..+++.++... .+..++|.|+|++|+.+++... ..+++.++|
T Consensus 163 ~fd~n~dG~Is~kEl~~~l----~~~~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF 235 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCL----SKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIF 235 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHH----CSCHHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHH----HhcCChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHH
Confidence 4899999999999997653 433333 56888888875211 0112356699999998887642 456899999
Q ss_pred HhhcCCCCccccCCCC-CCCCCCCCCCccccCh-----hHHHHHHHhhhhhcC--C----CCCCCCHHHHhhhhcc
Q 010673 142 RKFGYGDDLELRDDFL-PVPTKLSPDQSVELAS-----EAVEFLRGIFGLYDI--D----NDGAVRPAELEDLFLT 205 (504)
Q Consensus 142 ~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~-----~~~~~l~~lf~~~D~--d----~dG~l~~~e~~~l~~~ 205 (504)
+.|+.|+++.|+. +| . -+ ...+....+.. ...+.+.+||++++. | ++|.+++++|...+..
T Consensus 236 ~~y~~dg~~~mT~-eL~~-FL-~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S 308 (816)
T 3qr0_A 236 KELSKNKGNITTV-MFRD-FL-NDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC 308 (816)
T ss_dssp HHHTTTSSSEEHH-HHHH-HH-HHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred HHHccCCCCcccH-HHHH-HH-HHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence 9999999999999 88 4 22 11111111111 113678899999887 5 7899999999887763
No 443
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.29 E-value=5.1e-07 Score=85.86 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=69.1
Q ss_pred ChhhHhhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHH---HHHhccCCCCCCcEEEEEEC-CCCCCCccchHHHH
Q 010673 342 PEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVE---VARLGEDSGYGVPCLLIASK-DDLKPYTMAVQDSA 417 (504)
Q Consensus 342 g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~---l~~~~~~~~~~~piilV~NK-~Dl~~~~~~~~~~~ 417 (504)
|+..++.+| ..|+.++|++|||+|++|++.++ ...-+.+ +.... ....+.|++|.+|| .|++..-. ..
T Consensus 196 GQ~~lRplW--r~Yy~~tdglIfVVDSsDreRle-ak~EL~eL~~mL~e~-~~l~~apLLVfANKkQDlp~Ams----~~ 267 (312)
T 3l2o_B 196 SRYSVIPQI--QKVCEVVDGFIYVANAEAHKRHE-WQDEFSHIMAMTDPA-FGSSGRPLLVLSCISQGDVKRMP----CF 267 (312)
T ss_dssp -CCCCCHHH--HHHHHHCSEEEECCBCBTTCCCC-HHHHHHHHHHHHCHH-HHCTTCCEEEEEEESSTTSCBCC----HH
T ss_pred CHHHHHHHH--HHHhcCCCEEEEEecCCcHhHHH-HHHHHHHHHHHhcch-hhcCCCeEEEEeCCcccccCCCC----HH
Confidence 345567777 46999999999999999987654 2222221 11110 00258999999996 58865332 33
Q ss_pred HHHHHhCCC------CeEEEeccc-cCHHHHHHHHHHHHhCC
Q 010673 418 RVTQELGIE------PPIPVSMKS-KDLNNVFSRIIWAAEHP 452 (504)
Q Consensus 418 ~~~~~~~~~------~~~~vSak~-~gi~el~~~l~~~~~~~ 452 (504)
++++.+++. .+..|||++ +|+.+-+++|.+.+...
T Consensus 268 EI~e~L~L~~l~r~W~Iq~csA~tGeGL~EGldWL~~~l~~k 309 (312)
T 3l2o_B 268 YLAHELHLNLLNHPWLVQDTEAETLTGFLNGIEWILEEVESK 309 (312)
T ss_dssp HHHHHTTGGGGCSCEEEEEEETTTCTTHHHHHHHHHHHSCC-
T ss_pred HHHHHcCCccCCCcEEEEecccCCCcCHHHHHHHHHHHHHhh
Confidence 445555442 368899999 99999999999987543
No 444
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=98.28 E-value=4.9e-07 Score=82.35 Aligned_cols=63 Identities=6% Similarity=0.066 Sum_probs=56.4
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||.|+||+|+.+||..++ .+|..++++++..|+..++.+ ++|.|++++|+.++.
T Consensus 126 ~~l~~~F~~~D~d~~G~Is~~El~~~l--~~g~~~~~~~~~~l~~~~D~d-----~dG~I~~~EF~~~l~ 188 (196)
T 3dtp_E 126 DVIVNAFNLFDEGDGKCKEETLKRSLT--TWGEKFSQDEVDQALSEAPID-----GNGLIDIKKFAQILT 188 (196)
T ss_dssp HHHHHHHHTTCSSSSCCBHHHHHHHHH--HSSSCCCHHHHHHHHHSSCEE-----TTEECHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHH--HcCCCCCHHHHHHHHHHcCCC-----CCCEEeHHHHHHHHH
Confidence 468899999999999999999999998 679999999999999999776 466699999987764
No 445
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=98.28 E-value=1.4e-06 Score=74.12 Aligned_cols=64 Identities=17% Similarity=0.198 Sum_probs=56.1
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
...++++|+.||+|+||.|+.+||..++.. +|.++++++++.++..++. ++|.|++++|+.++.
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~------~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPV------KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHH-HHSCSCHHHHHHHHHHTTC------SSCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-cCCCCCHHHHHHHHHhccC------CCCcEeHHHHHHHHh
Confidence 467899999999999999999999999875 5999999999999999854 367799999997753
No 446
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=98.28 E-value=4.3e-07 Score=80.98 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=68.7
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
.+.++|..+|.|+||.|+.+|+..++..........+++..++..+|.+ ++|.|+.++|..+....-..-..+++
T Consensus 48 ~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~I~~~E~~~~l~~~g~~~~~~~~ 122 (179)
T 2f2o_A 48 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD-----GNGYISAAELRHVMTNLGEKLTDEEV 122 (179)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----CSSEECHHHHHHHHHHC--CCCHHHH
T ss_pred HHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHhCCCCCHHHH
Confidence 3567888889999999999888777665444344556677777777665 45568888888766554333445678
Q ss_pred HHHHHhhcCCCCccccCCCC
Q 010673 138 WAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l 157 (504)
..+|+.+|.|++|.|+.+++
T Consensus 123 ~~~~~~~D~~~dg~i~~~eF 142 (179)
T 2f2o_A 123 DEMIREADIDGDGQVNYEEF 142 (179)
T ss_dssp HHHHHHHCTTCSSSEEHHHH
T ss_pred HHHHHHcCCCCCCcCcHHHH
Confidence 88888888888888887766
No 447
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=98.27 E-value=1.2e-06 Score=75.93 Aligned_cols=63 Identities=16% Similarity=0.243 Sum_probs=55.4
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|+||+|+.+||..++.. +|.++++++++.++..++. ++|.|++++|+.++.
T Consensus 85 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~------~dg~I~~~eF~~~~~ 147 (153)
T 2ovk_B 85 DALRNAFSMFDEDGQGFIPEDYLKDLLEN-MGDNFSKEEIKNVWKDAPL------KNKQFNYNKMVDIKG 147 (153)
T ss_dssp THHHHHHHTTCSSCSSCCCHHHHHHHHHH-SSSCCCHHHHHHHHHHCCE------ETTEECHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cCCCCCHHHHHHHHHHcCC------CCCEEeHHHHHHHHh
Confidence 46889999999999999999999999874 6999999999999998854 366799999997764
No 448
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=98.27 E-value=3.6e-07 Score=79.87 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=73.5
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcC---CCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCc
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFN---APLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRL 134 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g---~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~ 134 (504)
.+.++|+.+|.|+||.|+.+|+..++..... .....+++..+.+.+|.+ ++|.|+.++|..+....-..-..
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~i~~~El~~~l~~~g~~~~~ 130 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN-----ADGYIDLEELKIMLQATGETITE 130 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTT-----CSSEEEHHHHGGGGTTC--CCCH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHhCCCCCH
Confidence 4677899999999999999999988777655 556678888888888776 46669999998665443223455
Q ss_pred hhHHHHHHhhcCCCCccccCCCC
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
+++..+|+.+|.|++|.|+.+++
T Consensus 131 ~~~~~~~~~~D~d~dg~i~~~eF 153 (161)
T 1dtl_A 131 DDIEELMKDGDKNNDGRIDYDEF 153 (161)
T ss_dssp HHHHHHHHHHCTTSSSEEEHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHH
Confidence 78999999999999999886655
No 449
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=98.27 E-value=7.5e-07 Score=92.65 Aligned_cols=153 Identities=10% Similarity=0.018 Sum_probs=86.9
Q ss_pred CceEEEEEEcCCCchhhHHHHHHh------cCCCCCCC----CCCc---------cceEEEEEEEcC-------------
Q 010673 282 RNVFRCLLFGPQNAGKSALLNSFL------ERPFSENY----APTT---------GEQYAVNVVDQP------------- 329 (504)
Q Consensus 282 ~~~~kI~vvG~~~vGKSSLin~l~------~~~~~~~~----~~T~---------~~~~~~~~v~~~------------- 329 (504)
.....|+|+|.+||||||++++|. +.+..... .+.. ...+.+......
T Consensus 99 ~~~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r~aa~~qL~~~~~~~~i~v~~~~~~~dp~~i~~~al~~ 178 (504)
T 2j37_W 99 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEK 178 (504)
T ss_dssp S--EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHTCCEEECCCCSCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccchhHHHHHHHHhhccCceEEccCCCCCHHHHHHHHHHH
Confidence 345689999999999999999999 54432111 1110 000111000000
Q ss_pred --CCcEEEEEEecCChhhH-----hhhhhhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcE-EEEE
Q 010673 330 --GGNKKTLILQEIPEEGV-----KKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPC-LLIA 401 (504)
Q Consensus 330 --~~~~~~li~d~~g~~~~-----~~~~~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~pi-ilV~ 401 (504)
.....++++|++|.... ..+..... +..+|.+++|+|++..... ......+.. .+|+ ++|.
T Consensus 179 ~~~~~~DvvIIDTpG~~~~~~~l~~el~~~~~-~i~pd~vllVvDa~~g~~~---~~~a~~~~~-------~~~i~gvVl 247 (504)
T 2j37_W 179 FKNENFEIIIVDTSGRHKQEDSLFEEMLQVAN-AIQPDNIVYVMDASIGQAC---EAQAKAFKD-------KVDVASVIV 247 (504)
T ss_dssp HHHTTCCEEEEEECCCCTTCHHHHHHHHHHHH-HHCCSEEEEEEETTCCTTH---HHHHHHHHH-------HHCCCCEEE
T ss_pred HHHCCCcEEEEeCCCCcccchhHHHHHHHHHh-hhcCceEEEEEeccccccH---HHHHHHHHh-------hcCceEEEE
Confidence 02246788999987422 12211111 2378999999999876432 222233322 2575 8999
Q ss_pred ECCCCCCCccchHHHHHHHHHhCCC-----------------CeEEEeccc-cC-HHHHHHHHHHH
Q 010673 402 SKDDLKPYTMAVQDSARVTQELGIE-----------------PPIPVSMKS-KD-LNNVFSRIIWA 448 (504)
Q Consensus 402 NK~Dl~~~~~~~~~~~~~~~~~~~~-----------------~~~~vSak~-~g-i~el~~~l~~~ 448 (504)
||+|....... .......++.| +.+.+|+.. .| +.+|++.+.+.
T Consensus 248 NK~D~~~~~g~---~l~~~~~~g~PI~fig~ge~~~dl~~f~~~~~vsal~G~Gdi~~Lie~i~e~ 310 (504)
T 2j37_W 248 TKLDGHAKGGG---ALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL 310 (504)
T ss_dssp ECTTSCCCCTH---HHHHHHHHCCCEEEEECSSSTTCEECCTHHHHHHCCCTTTTTTTTHHHHTTT
T ss_pred eCCccccchHH---HHHHHHHhCCCeEEeccccchhhhhccCcceeeehhcCCCcHHHHHHHHHHH
Confidence 99998753321 22234455543 123468888 88 99999998765
No 450
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=98.27 E-value=2.8e-07 Score=79.70 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=54.2
Q ss_pred HHHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 56 VRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
...++++|+.||.|+||+|+.+||..++.. +|.++++++++.++..++ + ++|.|++++|+.++
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~d-~-----~dg~i~~~eF~~~~ 148 (151)
T 1w7j_B 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTT-LGEKMTEEEVETVLAGHE-D-----SNGCINYEAFLKHI 148 (151)
T ss_dssp --CCHHHHHTTCTTSSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHTTCC-C-----TTSEEEHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHhcc-C-----CCCeEeHHHHHHHH
Confidence 456778999999999999999999999874 699999999999999887 5 46679999998764
No 451
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=98.27 E-value=2.2e-06 Score=74.99 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=56.8
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFI 129 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~ 129 (504)
..++++|+.||.|+||.|+.+|+..++.. +| ++++++..++..++.+ ++|.|++++|+.++..+.
T Consensus 98 ~~~~~~F~~~D~d~~G~i~~~E~~~~l~~-~~--~~~~~~~~~~~~~D~d-----~dg~i~~~ef~~~~~~~~ 162 (166)
T 3akb_A 98 PFLHAALGVADTDGDGAVTVADTARALTA-FG--VPEDLARQAAAALDTD-----GDGKVGETEIVPAFARYF 162 (166)
T ss_dssp HHHHHHHHHHCSSSSSCCBHHHHHHHHHH-TT--CCHHHHHHHHHHHCTT-----CSSBCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-hC--CCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHh
Confidence 44899999999999999999999999775 57 9999999999999877 467799999998876554
No 452
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.26 E-value=4e-07 Score=78.68 Aligned_cols=64 Identities=17% Similarity=0.162 Sum_probs=47.9
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHc-------CCCCCHHHHHHHH----HHhhhhccCCcCCCCCCHHhHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCF-------NAPLQPAEIVGVK----RVVQEKQHDGVNDLGLTLSGFLFLH 125 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~-------g~~~~~~e~~~~~----~~~~~~~~~~~~~~~i~~~~Fl~l~ 125 (504)
..++++|+.||+|+||+|+.+||..++.... |.+++++++..++ +.++.+ ++|.|++++|+.++
T Consensus 68 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d-----~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 68 ELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKN-----NDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTT-----CSSEECHHHHHC--
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCC-----CCCcEeHHHHHHHH
Confidence 5688899999999999999999988766443 4689999998877 666655 46669999998653
No 453
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=98.26 E-value=3.2e-07 Score=85.18 Aligned_cols=156 Identities=8% Similarity=-0.034 Sum_probs=93.2
Q ss_pred cCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cCCchhHHHHHHh--
Q 010673 67 DHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KGRLETTWAVLRK-- 143 (504)
Q Consensus 67 D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~~~e~~~~~~~~-- 143 (504)
++++++.++.+|+.. .+...++++++..+......-+.+ ++|.|+.++|..++...++ ....+++..+++.
T Consensus 22 ~~~~~~~~~~~~l~~----~~~~~ls~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~ 95 (219)
T 3cs1_A 22 KKAKDRKEAWERIRQ----AIPREKTAEAKQRRIELFKKFDKN--ETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAF 95 (219)
T ss_dssp CCHHHHHHHHHHHHH----HSCCSSSHHHHHHHHHHHHHHCTT--CSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHH----HhcccCCHHHHHHHHHHHHHhCCC--CCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 334455566666633 244566776666655555443222 4667999999866654222 2222344443332
Q ss_pred ------h-cCCCCccccCCCC-CCCCCCCCCCccccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCC--CCC-C
Q 010673 144 ------F-GYGDDLELRDDFL-PVPTKLSPDQSVELAS-EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAP--ESP-W 211 (504)
Q Consensus 144 ------f-~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p--~~p-~ 211 (504)
+ +.|++|.|+.+++ . .+ ..+.. ...+.+..+|+.+|.|++|.|+.+||..++.... .++ .
T Consensus 96 ~~~~~~~~~~d~~g~I~~~EF~~-~~-------~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~ 167 (219)
T 3cs1_A 96 DKSRTLGSKLENKGSEDFVEFLE-FR-------LMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVE 167 (219)
T ss_dssp HHHHHHHHHHHTSCCCSSBCHHH-HH-------HHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHhhhhccCCCCcCCHHHHHH-HH-------HHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHH
Confidence 2 3478999998877 4 11 01111 1126789999999999999999999999986431 222 1
Q ss_pred CCCccccccccccCCcccHHHHHHh
Q 010673 212 DEAPYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 212 ~~~~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
.-..+......+..|.|++..|+..
T Consensus 168 e~~~l~~~~D~d~dG~I~~~EF~~~ 192 (219)
T 3cs1_A 168 DPAALFKELDKNGTGSVTFDEFAAW 192 (219)
T ss_dssp CHHHHHHHHCTTSSSEEEHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 1011223345677899999999655
No 454
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.26 E-value=3.5e-08 Score=89.48 Aligned_cols=128 Identities=11% Similarity=0.037 Sum_probs=83.9
Q ss_pred HHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChh
Q 010673 96 IVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASE 174 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~ 174 (504)
+..++..+|.+ ++|.|+.++|..+..........+++..+|+.+|.|++|.|+.+++ . .+.... .. .
T Consensus 12 l~~~F~~~D~d-----~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~-~~~~~~----~~--~ 79 (188)
T 1s6i_A 12 LKELFKMIDTD-----NSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA-ATVHLN----KL--E 79 (188)
T ss_dssp HHHHHHTTSSS-----SSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHH-HHTTSS----SS--C
T ss_pred HHHHHHHHCCC-----CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHH-HHHHHh----cc--C
Confidence 44555555544 4667999999876654322334467999999999999999998777 5 221100 00 0
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCC-CCCCccccccccccCCcccHHHHHHh
Q 010673 175 AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP-WDEAPYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 175 ~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p-~~~~~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
..+.+..+|+.+|.|++|.|+.+||..++.... ++ ..-.........+..|.|++..|+..
T Consensus 80 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g-~~~~~~~~~~~~~D~d~dG~Is~~EF~~~ 141 (188)
T 1s6i_A 80 REENLVSAFSYFDKDGSGYITLDEIQQACKDFG-LDDIHIDDMIKEIDQDNDGQIDYGEFAAM 141 (188)
T ss_dssp CCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT-CCTTHHHHHHHHHCSSSSSEEETTHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC-CCHHHHHHHHHHHCCCCCCcEeHHHHHHH
Confidence 013478899999999999999999999987542 22 10011223344566788888888544
No 455
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=98.26 E-value=4.1e-07 Score=77.98 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=52.9
Q ss_pred HHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHH
Q 010673 59 LKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTW 138 (504)
Q Consensus 59 l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~ 138 (504)
+.++|..+|.|+||.|+.+|+..++..........+.+..+.+.+|.+ ++|.|+.++|..+....-..-..+++.
T Consensus 49 ~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d-----~~G~i~~~e~~~~l~~~~~~~~~~~~~ 123 (147)
T 4ds7_A 49 VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKN-----GDGLISAAELKHVLTSIGEKLTDAEVD 123 (147)
T ss_dssp HHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTT-----CSSEECHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCC-----CCCeECHHHHHHHHHHcCCCCCHHHHH
Confidence 455666666666666666666666554444444455566666666554 344466666665554332223335566
Q ss_pred HHHHhhcCCCCccccCCCC
Q 010673 139 AVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 139 ~~~~~f~~d~~~~i~~~~l 157 (504)
.+|+.+| |++|.|+.+++
T Consensus 124 ~~~~~~d-~~dg~i~~~eF 141 (147)
T 4ds7_A 124 EMLREVS-DGSGEINIKQF 141 (147)
T ss_dssp HHHHHHS-SSCSSEEHHHH
T ss_pred HHHHHhc-CCCCcCcHHHH
Confidence 6666666 66666664443
No 456
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.25 E-value=7.6e-07 Score=93.04 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-cC-------------CchhHHHHHHhhcCCCCccccCCCC
Q 010673 92 QPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-KG-------------RLETTWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 92 ~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-~~-------------~~e~~~~~~~~f~~d~~~~i~~~~l 157 (504)
++++++.+.+....-+.+ ++|.|+.+||......+.. .| ..+++..+|+.+|.|++|.|+.+++
T Consensus 326 ~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef 403 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTN--NDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEF 403 (486)
T ss_dssp CHHHHHHHHHHHHHHCTT--CSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHH
T ss_pred cHHHHHHHHHHHHHhCCC--CCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHH
Confidence 445444444444333222 4677999999765544332 11 1357999999999999999998887
Q ss_pred -CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCC-CCC-CCCCccccccccccCCcccHHHHH
Q 010673 158 -PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAP-ESP-WDEAPYKDAAETTALGNLTLKGFV 234 (504)
Q Consensus 158 -~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p-~~p-~~~~~~~~~~~~~~~g~i~~~~~l 234 (504)
. .+... ......+.+..+|+.+|+|+||.|+.+||..++.... .++ ..-.........+..|.|+++.|+
T Consensus 404 ~~-~~~~~------~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~ 476 (486)
T 3mwu_A 404 IA-SAIDR------TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476 (486)
T ss_dssp HH-HHSCT------TTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHH
T ss_pred HH-HHHhh------hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 5 22111 0111136788999999999999999999999988542 222 111123344566789999999996
Q ss_pred Hh
Q 010673 235 SK 236 (504)
Q Consensus 235 ~~ 236 (504)
..
T Consensus 477 ~~ 478 (486)
T 3mwu_A 477 EM 478 (486)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 457
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=98.24 E-value=1.8e-06 Score=79.10 Aligned_cols=65 Identities=15% Similarity=0.199 Sum_probs=56.7
Q ss_pred HHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 59 LKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 59 l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
++++|+.||+|+||.|+.+||..++.. +| +++++++.++..++.+ ++|.|++++|+.++..+...
T Consensus 130 ~~~~F~~~D~d~~G~Is~~El~~~l~~-~g--~~~~~~~~~~~~~D~d-----~dG~I~~~EF~~~~~~~~~~ 194 (208)
T 2hpk_A 130 SNSYYDVLDDDGDGTVDVDELKTMMKA-FD--VPQEAAYTFFEKADTD-----KSGKLERTELVHLFRKFWME 194 (208)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHH-TT--SCTTHHHHHHHHHCTT-----CCSSBCHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHH-hC--cCHHHHHHHHHHhCCC-----CCCcCcHHHHHHHHHHHhcC
Confidence 788999999999999999999999874 57 9999999999999877 57779999999888766543
No 458
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.23 E-value=4.1e-08 Score=76.76 Aligned_cols=81 Identities=12% Similarity=0.059 Sum_probs=59.8
Q ss_pred CCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCC
Q 010673 113 DLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDN 190 (504)
Q Consensus 113 ~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~ 190 (504)
+|.|+|++++ +...+.....++++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+|.|+
T Consensus 3 ~G~i~~~e~~--~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~-~l-------~~~~~~~~~~~~~~l~~~~d~~~ 72 (87)
T 1s6j_A 3 SGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKD-GL-------KRVGSELMESEIKDLMDAADIDK 72 (87)
T ss_dssp SSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHH-HH-------HTTTSSCCHHHHHHHHHHHCTTC
T ss_pred CCccCccHHH--HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCC
Confidence 5669999943 222223334467999999999999999999888 5 33 1222211 267889999999999
Q ss_pred CCCCCHHHHhhhh
Q 010673 191 DGAVRPAELEDLF 203 (504)
Q Consensus 191 dG~l~~~e~~~l~ 203 (504)
+|.|+++||..++
T Consensus 73 ~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 73 SGTIDYGEFIAAT 85 (87)
T ss_dssp SSEECHHHHTTCC
T ss_pred CCcCcHHHHHHHH
Confidence 9999999998765
No 459
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=98.22 E-value=6.7e-08 Score=97.21 Aligned_cols=137 Identities=11% Similarity=0.012 Sum_probs=80.0
Q ss_pred EEEEEEcCCCchhhHHHHHHhcCCCC-----C---CCCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhh----h--
Q 010673 285 FRCLLFGPQNAGKSALLNSFLERPFS-----E---NYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKI----L-- 350 (504)
Q Consensus 285 ~kI~vvG~~~vGKSSLin~l~~~~~~-----~---~~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~----~-- 350 (504)
.+|+++|.+|||||||+|+|++.... . ..+.|+.. ...+.+.++ ..++|++|-.....+ .
T Consensus 161 ~~i~~vG~~nvGKStliN~L~~~~~~~~~~~~~~~~~~gtT~~---~~~~~~~~~---~~liDtPG~~~~~~~~~~l~~~ 234 (368)
T 3h2y_A 161 KDVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTTLD---LIDIPLDEE---SSLYDTPGIINHHQMAHYVGKQ 234 (368)
T ss_dssp SCEEEEEBTTSSHHHHHHHHHHHHTTSCSSCCEEECCC----C---EEEEESSSS---CEEEECCCBCCTTSGGGGSCHH
T ss_pred ceEEEecCCCCChhHHHHHHHhhhccccccceecCCCCCeecc---eEEEEecCC---eEEEeCCCcCcHHHHHHHhhHH
Confidence 36999999999999999999986321 1 11233332 233555533 567898886322111 0
Q ss_pred --hhhhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCe
Q 010673 351 --SNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPP 428 (504)
Q Consensus 351 --~~~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~ 428 (504)
......+..+.+++++|......+..+.. +..+. ..+.|+++|+||+|...........+.+.+.++.. .
T Consensus 235 ~l~~~~~~~~i~~~~~~l~~~~~~~~g~l~~-~d~l~------~~~~~~~~v~nk~d~~~~~~~~~~~~~~~~~~g~~-l 306 (368)
T 3h2y_A 235 SLKLITPTKEIKPMVFQLNEEQTLFFSGLAR-FDYVS------GGRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDL-L 306 (368)
T ss_dssp HHHHHSCSSCCCCEEEEECTTEEEEETTTEE-EEEEE------SSSEEEEEEECTTSCEEEEEHHHHHHHHHHHBTTT-B
T ss_pred HHHHhccccccCceEEEEcCCCEEEEcceEE-EEEec------CCCceEEEEecCccccccccHHHHHHHHHHHhCCc-c
Confidence 00111367888999998743211111100 11111 33789999999999987666555666777777764 4
Q ss_pred EEEeccc
Q 010673 429 IPVSMKS 435 (504)
Q Consensus 429 ~~vSak~ 435 (504)
.+.++.+
T Consensus 307 ~p~~~~~ 313 (368)
T 3h2y_A 307 SPPTPEE 313 (368)
T ss_dssp CSSCHHH
T ss_pred CCCchhh
Confidence 5555544
No 460
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=98.22 E-value=9.2e-08 Score=96.24 Aligned_cols=139 Identities=12% Similarity=0.133 Sum_probs=83.8
Q ss_pred EEEEEcCCCchhhHHHHHHhcC-----CCCC-C-CCCCccceEEEEEEEcCCCcEEEEEEecCChhhHhhh----h-hhh
Q 010673 286 RCLLFGPQNAGKSALLNSFLER-----PFSE-N-YAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGVKKI----L-SNK 353 (504)
Q Consensus 286 kI~vvG~~~vGKSSLin~l~~~-----~~~~-~-~~~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~~~~~----~-~~~ 353 (504)
+|+++|.+|||||||+|+|++. .... . .++|+.. ...+.+..+ ..++|++|-.....+ . ...
T Consensus 164 ~i~~vG~~nvGKStliN~L~~~~~~~~~~~~~~~~~gtT~~---~~~~~~~~~---~~liDtPG~~~~~~~~~~l~~~~l 237 (369)
T 3ec1_A 164 DVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTTLD---MIEIPLESG---ATLYDTPGIINHHQMAHFVDARDL 237 (369)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHHHTTCCCEEEECTTSSCE---EEEEECSTT---CEEEECCSCCCCSSGGGGSCTTTH
T ss_pred cEEEEcCCCCchHHHHHHHHhhccCCccceeecCCCCeEEe---eEEEEeCCC---eEEEeCCCcCcHHHHHHHHhHHHH
Confidence 6999999999999999999986 2222 1 2334443 233555522 567898885321111 0 011
Q ss_pred hhc---ccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHHHHHHHHhCCCCeEE
Q 010673 354 EAL---ASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDSARVTQELGIEPPIP 430 (504)
Q Consensus 354 ~~~---~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 430 (504)
..+ +..+.++++++......+..+.. +..+. ..+.|+++++||+|...........+.+.+.++.. ..+
T Consensus 238 ~~~~~~~~i~~~~~~l~~~~~~~~g~l~~-l~~l~------~~~~~~~~v~~k~d~~~~~~~~~~~~~~~~~~g~~-l~p 309 (369)
T 3ec1_A 238 KIITPKREIHPRVYQLNEGQTLFFGGLAR-LDYIK------GGRRSFVCYMANELTVHRTKLEKADSLYANQLGEL-LSP 309 (369)
T ss_dssp HHHSCSSCCCCEEEEECTTEEEEETTTEE-EEEEE------SSSEEEEEEECTTSCEEEEEGGGHHHHHHHHBTTT-BCS
T ss_pred HHHhcccccCceEEEEcCCceEEECCEEE-EEEcc------CCCceEEEEecCCcccccccHHHHHHHHHHhcCCc-cCC
Confidence 222 67899999999843311111100 11111 34789999999999887665555666777777764 555
Q ss_pred Eeccc-cCH
Q 010673 431 VSMKS-KDL 438 (504)
Q Consensus 431 vSak~-~gi 438 (504)
.++.. .++
T Consensus 310 ~~~~~~~~~ 318 (369)
T 3ec1_A 310 PSKRYAAEF 318 (369)
T ss_dssp SCGGGTTTC
T ss_pred CCchhhhhc
Confidence 56555 444
No 461
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.22 E-value=1.9e-07 Score=74.37 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=61.9
Q ss_pred CCHHhHHHHHHHHHhc-CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCC
Q 010673 116 LTLSGFLFLHALFIEK-GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDG 192 (504)
Q Consensus 116 i~~~~Fl~l~~~~~~~-~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG 192 (504)
+.-.+|+.++...+.. ...++++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+|.|+||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~-~l-------~~~g~~~~~~e~~~l~~~~D~d~dG 80 (94)
T 2kz2_A 9 HGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRH-VM-------TNLGEKLTDEEVDEMIREADIDGDG 80 (94)
T ss_dssp CCSSCCTHHHHHHHCCCSCHHHHHHHHHHHCTTCCSCBCHHHHHH-HH-------HHHTCCCCHHHHHHHHHHHCTTCSS
T ss_pred cCcccHHHHHHHHhcCCCHHHHHHHHHHHHCCCCcCcCCHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCCCC
Confidence 4456677777666654 34467999999999999999999988 5 32 1222211 26789999999999999
Q ss_pred CCCHHHHhhhhc
Q 010673 193 AVRPAELEDLFL 204 (504)
Q Consensus 193 ~l~~~e~~~l~~ 204 (504)
.|+++||..++.
T Consensus 81 ~I~~~EF~~~~~ 92 (94)
T 2kz2_A 81 QVNYEEFVQMMT 92 (94)
T ss_dssp SBCHHHHHHHHH
T ss_pred cEeHHHHHHHHh
Confidence 999999998875
No 462
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=98.22 E-value=3.6e-07 Score=95.71 Aligned_cols=135 Identities=12% Similarity=0.104 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc--------CCchhHHHHHHhhcCCCCccccCCCC-CCCC
Q 010673 91 LQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK--------GRLETTWAVLRKFGYGDDLELRDDFL-PVPT 161 (504)
Q Consensus 91 ~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~--------~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~ 161 (504)
+++++++.+.+....-+.+ ++|.|+++||..++...... ...+++.++|+.+|.|++|.|+.+++ . .+
T Consensus 340 ~~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~-~~ 416 (494)
T 3lij_A 340 TSQEETKELTDIFRHIDKN--GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVT-VA 416 (494)
T ss_dssp CCHHHHHHHHHHHHHHCTT--CSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHH-HH
T ss_pred ccHHHHHHHHHHHHHhCcC--CCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHH-HH
Confidence 3566555555544443222 46669999998776655331 11367899999999999999999888 5 22
Q ss_pred CCCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCCCC-CCccccccccccCCcccHHHHHHh
Q 010673 162 KLSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWD-EAPYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 162 ~~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p~~-~~~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
...... ..+.+..+|+.+|+|+||.|+.+||..++... ..+-. -.........+..|.|++..|+..
T Consensus 417 -------~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 485 (494)
T 3lij_A 417 -------MDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLD-HLESKTWKEMISGIDSNNDGDVDFEEFCKM 485 (494)
T ss_dssp -------SCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-CC-SCCCHHHHHHHHTTCSSSSSSEEHHHHHHH
T ss_pred -------HhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc-CCCHHHHHHHHHHhCCCCCCcCCHHHHHHH
Confidence 011111 12778999999999999999999999998752 22200 011223445677899999999654
No 463
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=98.22 E-value=3e-06 Score=78.35 Aligned_cols=93 Identities=10% Similarity=-0.007 Sum_probs=74.3
Q ss_pred HHhHhhhcCCCCCc-cCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-----cCC
Q 010673 60 KRIFIICDHDMDGA-LNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-----KGR 133 (504)
Q Consensus 60 ~~~F~~~D~d~dG~-l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-----~~~ 133 (504)
.++|..+|.|+||. |+.+|+..++.........++++..+++.+|.+ ++|.|+.++|..+...... .-.
T Consensus 94 ~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d-----~dG~Is~~El~~~l~~~~~~~~~~~~s 168 (214)
T 2l4h_A 94 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFD-----DDGTLNREDLSRLVNCLTGEGEDTRLS 168 (214)
T ss_dssp HHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTT-----CSSCBCHHHHHHHHHHHHHSSSCTTCS
T ss_pred HHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHHHhccccCCCCC
Confidence 46899999999999 999999888775544445577899999999887 5777999999987765544 333
Q ss_pred chhHH----HHHHhhcCCCCccccCCCC
Q 010673 134 LETTW----AVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 134 ~e~~~----~~~~~f~~d~~~~i~~~~l 157 (504)
.+++. .+|+.+|.|++|.|+.+++
T Consensus 169 ~~e~~~~~~~~~~~~D~d~dG~Is~~EF 196 (214)
T 2l4h_A 169 ASEMKQLIDNILEESDIDRDGTINLSEF 196 (214)
T ss_dssp CTHHHHHHHHHHHHHCCSCCSSBCSHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCcCCHHHH
Confidence 44555 4899999999999998766
No 464
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=98.21 E-value=1.7e-06 Score=75.21 Aligned_cols=63 Identities=10% Similarity=0.115 Sum_probs=55.0
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHH
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHA 126 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~ 126 (504)
..++++|+.||+|+||.|+.+||..++.. +|.++++++++.+++.++.+ +|.|++++|+.++.
T Consensus 87 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~~------dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 87 ETIRNAFAMFDEQETKKLNIEYIKDLLEN-MGDNFNKDEMRMTFKEAPVE------GGKFDYVKFTAMIK 149 (156)
T ss_dssp HHHHHHHHTTCTTCCSCEEHHHHHHHHHH-SSSCCCHHHHHHHHHHCCEE------TTEECHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCCCccCHHHHHHHHHH-hCCCCCHHHHHHHHHhcCCC------CCEEeHHHHHHHHh
Confidence 46889999999999999999999999874 69999999999999998553 44599999997764
No 465
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=98.21 E-value=4.7e-06 Score=84.59 Aligned_cols=144 Identities=16% Similarity=0.182 Sum_probs=68.1
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCCCCCC--CccceEEEEEEEcC-CCc-EEEEEEecCChhh-------------
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSENYAP--TTGEQYAVNVVDQP-GGN-KKTLILQEIPEEG------------- 345 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~~~~~--T~~~~~~~~~v~~~-~~~-~~~li~d~~g~~~------------- 345 (504)
..++++|+|++|+|||||+|.|++..+...... +.+.......+... .+. ....++++++-..
T Consensus 41 ei~~vaLvG~nGaGKSTLln~L~G~~l~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ltv~D~~~~g~~~~~~~~~~~i~~ 120 (427)
T 2qag_B 41 FCFNILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVE 120 (427)
T ss_dssp CEEEEEEECSTTSSSHHHHHHHHTSCC-------CCSSCEEEEEEEEEEC--CEEEEEEEEEECCCC-CCHHHHSHHHHH
T ss_pred CeeEEEEECCCCCCHHHHHHHHhCccccCCcCCCCCccceEeeEEEEeecCccccccchhhhhhhhhccccchhhhHHHH
Confidence 346799999999999999999999764321110 11111111111111 121 2334555543211
Q ss_pred -----Hhhhhhhh-------hhccccc---EEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCc
Q 010673 346 -----VKKILSNK-------EALASCD---VTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYT 410 (504)
Q Consensus 346 -----~~~~~~~~-------~~~~~ad---~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~ 410 (504)
+....... .....++ +++++.|...+.+..+ ..++..+ ..++|+|+|.||+|.....
T Consensus 121 ~i~~q~~~~L~e~~~i~r~l~~~~d~rVh~~v~fI~d~~~~l~~~D-ieilk~L-------~~~~~vI~Vi~KtD~Lt~~ 192 (427)
T 2qag_B 121 FIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLD-LVTMKKL-------DSKVNIIPIIAKADAISKS 192 (427)
T ss_dssp HHHHHHHHHHHHC--CCCCCCCSCC--CCEEEEEECCCC---CHHH-HHHHHHT-------CSCSEEEEEESCGGGSCHH
T ss_pred HHHHHHHHHHHHHHhhhhhhcccccccccEEEEEEeCCCCCCCHHH-HHHHHHH-------hhCCCEEEEEcchhccchH
Confidence 00010000 0112232 4666777765544443 2333333 2378999999999988755
Q ss_pred cchHHHHHHH---HHhCCCCeEEEeccc
Q 010673 411 MAVQDSARVT---QELGIEPPIPVSMKS 435 (504)
Q Consensus 411 ~~~~~~~~~~---~~~~~~~~~~vSak~ 435 (504)
+.......+. ...|++ ++.+|.-+
T Consensus 193 E~~~l~~~I~~~L~~~gi~-I~~is~~d 219 (427)
T 2qag_B 193 ELTKFKIKITSELVSNGVQ-IYQFPTDD 219 (427)
T ss_dssp HHHHHHHHHHHHHBTTBCC-CCCCC---
T ss_pred HHHHHHHHHHHHHHHcCCc-EEecCCCc
Confidence 5433222222 234554 66677543
No 466
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.20 E-value=7.4e-07 Score=93.59 Aligned_cols=134 Identities=16% Similarity=0.141 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc--------CCchhHHHHHHhhcCCCCccccCCCC-CCCCC
Q 010673 92 QPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK--------GRLETTWAVLRKFGYGDDLELRDDFL-PVPTK 162 (504)
Q Consensus 92 ~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~--------~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~ 162 (504)
++++++.+.+....-+.+ ++|.|+.+||...+...... ...+++..+|+.+|.|++|.|+.+++ . .+.
T Consensus 350 ~~~~~~~l~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~-~~~ 426 (504)
T 3q5i_A 350 TLEERKELTDIFKKLDKN--GDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFIS-VCM 426 (504)
T ss_dssp CHHHHHHHHHHHHHHCTT--CSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHH-HHS
T ss_pred cHHHHHHHHHHHHeeCCC--CCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHH-HHH
Confidence 666655555544443222 36669999998766544321 12367999999999999999998888 5 220
Q ss_pred CCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCCCC-CCCCccccccccccCCcccHHHHHHh
Q 010673 163 LSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP-WDEAPYKDAAETTALGNLTLKGFVSK 236 (504)
Q Consensus 163 ~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~~p-~~~~~~~~~~~~~~~g~i~~~~~l~~ 236 (504)
..... ..+.+.++|+.+|.|+||.|+.+||..++... +++ -.-.........+..|.|++..|+..
T Consensus 427 -------~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 494 (504)
T 3q5i_A 427 -------DKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT-SISEKTWNDVLGEADQNKDNMIDFDEFVSM 494 (504)
T ss_dssp -------CHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCS-CCCHHHHHHHHHTTCSSCSSSEEHHHHHHH
T ss_pred -------hhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 11111 12778999999999999999999999998762 222 00011233445677899999999655
No 467
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=98.19 E-value=2e-06 Score=83.10 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=66.0
Q ss_pred ecCChhhHhhhhhhhhhcccccEEEEEEeCCCcccHH--HHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchHHH
Q 010673 339 QEIPEEGVKKILSNKEALASCDVTIFVYDSSDEYSWK--RTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQDS 416 (504)
Q Consensus 339 d~~g~~~~~~~~~~~~~~~~ad~iilV~D~s~~~s~~--~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~~~ 416 (504)
|-+|+. ..........+.++|+|++|+|+.+|.+.. .+..++ .++|+++|+||+|+..... .+..
T Consensus 5 w~PGhm-~ka~~~~~~~l~~aDvVl~VvDAr~p~~~~~~~l~~~l-----------~~kp~ilVlNK~DL~~~~~-~~~~ 71 (282)
T 1puj_A 5 WFPGHM-AKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDIL-----------KNKPRIMLLNKADKADAAV-TQQW 71 (282)
T ss_dssp ----CT-THHHHHHHHHGGGCSEEEEEEETTSTTTTSCHHHHHHC-----------SSSCEEEEEECGGGSCHHH-HHHH
T ss_pred CCchHH-HHHHHHHHHHHhhCCEEEEEEeCCCCCccCCHHHHHHH-----------CCCCEEEEEECcccCCHHH-HHHH
Confidence 445552 233333467889999999999999997754 333332 3799999999999986322 1222
Q ss_pred HHHHHHhCCCCeEEEeccc-cCHHHHHHHHHHHHh
Q 010673 417 ARVTQELGIEPPIPVSMKS-KDLNNVFSRIIWAAE 450 (504)
Q Consensus 417 ~~~~~~~~~~~~~~vSak~-~gi~el~~~l~~~~~ 450 (504)
.++.+..+.+ ++.+||++ .|++++++.+.+.+.
T Consensus 72 ~~~~~~~g~~-~i~iSA~~~~gi~~L~~~i~~~l~ 105 (282)
T 1puj_A 72 KEHFENQGIR-SLSINSVNGQGLNQIVPASKEILQ 105 (282)
T ss_dssp HHHHHTTTCC-EEECCTTTCTTGGGHHHHHHHHHH
T ss_pred HHHHHhcCCc-EEEEECCCcccHHHHHHHHHHHHH
Confidence 2333444664 89999999 999999998877653
No 468
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.16 E-value=1.7e-07 Score=75.72 Aligned_cols=68 Identities=12% Similarity=0.035 Sum_probs=51.4
Q ss_pred hhHHHHHHhhc-CCCC-ccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFG-YGDD-LELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~-~d~~-~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
+++.++|+.|| .||+ |.|+.++| . .+....+. .|+... .+++.+||+.+|.|+||.|+|+||..++..
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~-~l~~~l~~--~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKE-LLQKELAT--WTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHH-HHHHHTTT--CCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHH-HHHHHhhh--hcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 47999999997 8887 99999999 5 33110100 122222 378999999999999999999999988764
No 469
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=98.14 E-value=1.2e-06 Score=81.58 Aligned_cols=106 Identities=10% Similarity=0.025 Sum_probs=80.1
Q ss_pred ccCcchHHHHHH------------HHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCC
Q 010673 47 DEQTLKPRCVRA------------LKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDL 114 (504)
Q Consensus 47 ~~~~l~~~~~~~------------l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~ 114 (504)
..+.|+.++... ++++|..+|.|+||.|+.+|+..++..........+++..+++.+|.+ ++|
T Consensus 63 ~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d-----~~G 137 (226)
T 2zfd_A 63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLK-----QQG 137 (226)
T ss_dssp CSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTT-----SSS
T ss_pred CCCeEcHHHHHHHHhccCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCC-----CCC
Confidence 456676655543 466999999999999999999988775543456678899999999887 577
Q ss_pred CCCHHhHHHHHHHHHh-cC---Cchh----HHHHHHhhcCCCCccccCCCC
Q 010673 115 GLTLSGFLFLHALFIE-KG---RLET----TWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 115 ~i~~~~Fl~l~~~~~~-~~---~~e~----~~~~~~~f~~d~~~~i~~~~l 157 (504)
.|+.++|..++..... .| ..++ +..+|+.+|.|++|.|+.+++
T Consensus 138 ~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF 188 (226)
T 2zfd_A 138 FIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEW 188 (226)
T ss_dssp SEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 7999999977754322 12 2233 356778999999999998776
No 470
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.13 E-value=6.2e-07 Score=72.19 Aligned_cols=65 Identities=17% Similarity=0.034 Sum_probs=52.6
Q ss_pred CCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 132 GRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 132 ~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
...++++++|+.||.|++|.|+.+++ . .+.. . .++ .+++.+||+.+|.|+||.|+++||..++..
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~-~l~~-~----~l~---~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAA-FLKK-S----GLP---DLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHH-HHHT-S----SSC---HHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHH-HHHH-c----CCC---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 34568999999999999999999998 6 3311 1 122 367899999999999999999999988864
No 471
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.12 E-value=1.1e-07 Score=82.99 Aligned_cols=110 Identities=13% Similarity=0.067 Sum_probs=70.0
Q ss_pred CCccCHHHHHHHHHHHcCC--CCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCC
Q 010673 71 DGALNDAELNEFQVKCFNA--PLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGD 148 (504)
Q Consensus 71 dG~l~~~El~~~~~~~~g~--~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~ 148 (504)
.|.|+..+.+.- .+|. .+++++++.|+..++.+. + +.+|..+. ...++++.+|+.||.|+
T Consensus 2 ~~~~~~~~~g~~---~~g~~~~~~~~~~~~i~~~~d~~~-----~----~~~~~~l~------~~~~~l~~~F~~~D~d~ 63 (150)
T 2jjz_A 2 SGELSNRFQGGK---AFGILKARQERRLAEINREFLCDQ-----K----YSDEENLP------EKLTAFKEKYMEFDLNN 63 (150)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHTCG-----G----GSSCTTHH------HHHHHHHHHHTTSCCCT
T ss_pred cchHHHHHhhhH---HHhhhcCCcHHHHHHHHHHhccCC-----C----chhhHhHH------HHHHHHHHHHHHhCCCC
Confidence 356666655432 2343 467889999999987651 1 33333321 12357999999999999
Q ss_pred CccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 149 DLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 149 ~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
+|.|+.++| . .+ ..++... ..++.++|+.+|.|+||.|+++||..++...
T Consensus 64 ~G~I~~~el~~-~l-------~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 64 EGEIDLMSLKR-MM-------EKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp TSSBCHHHHHH-HH-------HHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred cCcCCHHHHHH-HH-------HHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 999999988 5 33 1222111 2678899999999999999999999988753
No 472
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.11 E-value=6e-07 Score=72.39 Aligned_cols=68 Identities=10% Similarity=0.014 Sum_probs=51.2
Q ss_pred hhHHHHHHhhcCCC---CccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGYGD---DLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~d~---~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++++|+.||.|+ +|.|+.++| . .+....+. .++... .+++.+||+.+|.|+||.|+|+||..++..
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~-~l~~~~~~--~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFRE-MLQKELNH--MLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHH-HHHHHSTT--TTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHH-HHHHHccc--cccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 47999999999964 699999999 5 33110000 122222 378999999999999999999999998874
No 473
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=98.10 E-value=6.7e-06 Score=73.57 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=58.4
Q ss_pred HHHHHhH--hhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhc
Q 010673 57 RALKRIF--IICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEK 131 (504)
Q Consensus 57 ~~l~~~F--~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~ 131 (504)
.++.++| .+||.|+||+|+.+|+..++... |.+++++++..+++.++.+ ++|.|++++|+.++..+...
T Consensus 100 ~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~-g~~~~~~~~~~~~~~~D~d-----~dG~i~~~ef~~~~~~~~~~ 170 (186)
T 2hps_A 100 AVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV-GPDLTDDKAITCFNTLDFN-----KNGQISRDEFLVTVNDFLFG 170 (186)
T ss_dssp TTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-CTTCCHHHHHHHHHHHCTT-----CSSEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHcCC-----CCCcCcHHHHHHHHHHHhcC
Confidence 4555666 88899999999999999998754 9999999999999999877 46669999999888766643
No 474
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.10 E-value=6e-07 Score=65.88 Aligned_cols=61 Identities=15% Similarity=0.213 Sum_probs=49.4
Q ss_pred HHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 137 TWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 137 ~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++.+|+.||.|++|.|+.+++ . .+ ..++.... +.+..+|+.+|.|+||.|+++||..++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~-~l-------~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKA-FV-------SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHH-HH-------HHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHH-HH-------HHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 457899999999999999988 5 22 23333333 78899999999999999999999998764
No 475
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.10 E-value=3.7e-07 Score=67.19 Aligned_cols=62 Identities=19% Similarity=0.235 Sum_probs=49.9
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
++++.+|+.||.|++|.|+.++| . .+ ..++... .+.+..+|+.+|.|+||.|+++||..++.
T Consensus 1 ~~l~~~F~~~D~d~~G~i~~~el~~-~l-------~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 1 SSAKRVFEKFDKNKDGKLSLDEFRE-VA-------LAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp CTHHHHHHHHCTTSSSCEEHHHHHH-HH-------HHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 36889999999999999999988 5 33 1222222 26788999999999999999999998875
No 476
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=98.09 E-value=2.5e-06 Score=76.44 Aligned_cols=92 Identities=10% Similarity=-0.011 Sum_probs=72.9
Q ss_pred HhHhhhcCCCCCc-cCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHh-----cCCc
Q 010673 61 RIFIICDHDMDGA-LNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIE-----KGRL 134 (504)
Q Consensus 61 ~~F~~~D~d~dG~-l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~-----~~~~ 134 (504)
++|..+|.|+||. |+.+|+..++.........++++..+++.+|.+ ++|.|+.++|..++..... .-..
T Consensus 64 ~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d-----~~G~I~~~El~~~l~~~~~~~~~~~~~~ 138 (183)
T 1dgu_A 64 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFD-----DDGTLNREDLSRLVNCLTGEGEDTRLSA 138 (183)
T ss_dssp HHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTT-----CSSEEEHHHHHHHHHHHHSSSCCCHHHH
T ss_pred HHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCC-----CCCcCCHHHHHHHHHHHhcccccCCCCH
Confidence 5899999999999 999999998876655555677899999999877 4666999999977765433 1122
Q ss_pred hhHHH----HHHhhcCCCCccccCCCC
Q 010673 135 ETTWA----VLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 135 e~~~~----~~~~f~~d~~~~i~~~~l 157 (504)
+++.. +|+.+|.|++|.|+.+++
T Consensus 139 ~~~~~~~~~~~~~~D~d~dG~I~~~EF 165 (183)
T 1dgu_A 139 SEMKQLIDNILEESDIDRDGTINLSEF 165 (183)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEEEHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 44554 899999999999997766
No 477
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.08 E-value=1.2e-06 Score=71.00 Aligned_cols=82 Identities=6% Similarity=0.021 Sum_probs=62.5
Q ss_pred CCCHHhHHHHHHHHHhcCCchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCC
Q 010673 115 GLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDG 192 (504)
Q Consensus 115 ~i~~~~Fl~l~~~~~~~~~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG 192 (504)
.+++++++..+...+. ...++++.+|+.||.|++|.|+.++| . .+ ..++... .+++.++|+.+|.|+||
T Consensus 5 ~~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~e~~~l~~~~d~~~~g 75 (105)
T 1wlz_A 5 ATADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRA-IC-------NRRVQILTDEQFDRLWNEMPVNAKG 75 (105)
T ss_dssp TTCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHH-HH-------HHHTCCCCHHHHHHHHTTSCBCTTS
T ss_pred chhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHcCCCCCC
Confidence 4677788766655543 23568999999999999999999988 5 32 1222222 26788999999999999
Q ss_pred CCCHHHHhhhhcc
Q 010673 193 AVRPAELEDLFLT 205 (504)
Q Consensus 193 ~l~~~e~~~l~~~ 205 (504)
.|+++||..++..
T Consensus 76 ~i~~~eF~~~~~~ 88 (105)
T 1wlz_A 76 RLKYPDFLSRFSS 88 (105)
T ss_dssp CBCHHHHHHHHC-
T ss_pred CCcHHHHHHHHhc
Confidence 9999999999885
No 478
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.06 E-value=5.6e-07 Score=72.29 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=50.0
Q ss_pred hhHHHHHHhhc-CCCCc-cccCCCC-CCCCCCCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFG-YGDDL-ELRDDFL-PVPTKLSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~-~d~~~-~i~~~~l-~~~~~~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
+++.++|+.|| .|++| .|+.++| . .+....+. .++.. ..+++.++|+.+|.|+||.|+|+||..++..
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~-~l~~~lg~--~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 82 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKE-LLHKELPS--FVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHH-HHHHHCHH--HHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHH-HHHHHhhh--hccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 57899999997 88885 9999999 5 33100000 01211 1377999999999999999999999988763
No 479
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.06 E-value=1.9e-06 Score=89.96 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=77.0
Q ss_pred HHHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchh
Q 010673 57 RALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLET 136 (504)
Q Consensus 57 ~~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~ 136 (504)
..+.++|..+|.|+||.|+.+|+..++... +...+++++..+++.+|.+ ++|.|+.+||..++.. .....++
T Consensus 382 ~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~D~d-----~dG~I~~~El~~~l~~--~~~~~~~ 453 (484)
T 3nyv_A 382 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMFDSD-----NSGKISSTELATIFGV--SDVDSET 453 (484)
T ss_dssp HHHHHHHHHHTCCTTSEEEHHHHHHHHHHH-HHHHHHHHHHHHHHHHCTT-----CCSEEEHHHHHHHHHH--TTCCHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhc-cccCcHHHHHHHHHHHCCC-----CCCcCCHHHHHHHHHh--cCCCHHH
Confidence 567899999999999999999998876644 5556778899999999887 5667999999877654 3345578
Q ss_pred HHHHHHhhcCCCCccccCCCC
Q 010673 137 TWAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 137 ~~~~~~~f~~d~~~~i~~~~l 157 (504)
+.++|+.+|.|+||.|+.+++
T Consensus 454 ~~~~~~~~D~d~dG~i~~~Ef 474 (484)
T 3nyv_A 454 WKSVLSEVDKNNDGEVDFDEF 474 (484)
T ss_dssp HHHHHHHHCTTCCSEEEHHHH
T ss_pred HHHHHHHhcCCCCCcCCHHHH
Confidence 999999999999999987665
No 480
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=98.05 E-value=3.4e-05 Score=78.19 Aligned_cols=153 Identities=16% Similarity=0.141 Sum_probs=83.4
Q ss_pred ceEEEEEEcCCCchhhHHHHHHhcCCCCC----CCC--CCccceEEEEEEEcCCCcEEEEEEecCChhh----Hhhhhhh
Q 010673 283 NVFRCLLFGPQNAGKSALLNSFLERPFSE----NYA--PTTGEQYAVNVVDQPGGNKKTLILQEIPEEG----VKKILSN 352 (504)
Q Consensus 283 ~~~kI~vvG~~~vGKSSLin~l~~~~~~~----~~~--~T~~~~~~~~~v~~~~~~~~~li~d~~g~~~----~~~~~~~ 352 (504)
....++|+|++|||||||+|.+++-.... ... +++...+ ..+.. ......++|.++-.. ......
T Consensus 68 ~~~~valvG~nGaGKSTLln~L~Gl~~p~~GsI~~~g~~~t~~~~---v~q~~-~~~~ltv~D~~g~~~~~~~~~~~L~- 142 (413)
T 1tq4_A 68 SVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERH---PYKHP-NIPNVVFWDLPGIGSTNFPPDTYLE- 142 (413)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHTCCTTSTTSCCCCC----CCCE---EEECS-SCTTEEEEECCCGGGSSCCHHHHHH-
T ss_pred CCeEEEEECCCCCcHHHHHHHHhCCCCccCceEEECCeecceeEE---ecccc-ccCCeeehHhhcccchHHHHHHHHH-
Confidence 44579999999999999999999843211 111 1111111 11222 112345567665321 122211
Q ss_pred hhhcccccEEEEEEeCCCcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCC------------CCccchHHHHHHH
Q 010673 353 KEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLK------------PYTMAVQDSARVT 420 (504)
Q Consensus 353 ~~~~~~ad~iilV~D~s~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~------------~~~~~~~~~~~~~ 420 (504)
...+...+.+++ ++..... -+. ..+...+... +.|+++|.||.|+. ......+.+.+++
T Consensus 143 ~~~L~~~~~~~~-lS~G~~~-kqr-v~la~aL~~~------~~p~~lV~tkpdlllLDEPtsgLD~~~~~~l~~~l~~l~ 213 (413)
T 1tq4_A 143 KMKFYEYDFFII-ISATRFK-KND-IDIAKAISMM------KKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNC 213 (413)
T ss_dssp HTTGGGCSEEEE-EESSCCC-HHH-HHHHHHHHHT------TCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHH
T ss_pred HcCCCccCCeEE-eCCCCcc-HHH-HHHHHHHHhc------CCCeEEEEecCcccccCcccccCCHHHHHHHHHHHHHHH
Confidence 112344466555 7765321 112 2234444433 68999999999974 1111122344443
Q ss_pred H----HhC--CCCeEEEeccc---cCHHHHHHHHHHHH
Q 010673 421 Q----ELG--IEPPIPVSMKS---KDLNNVFSRIIWAA 449 (504)
Q Consensus 421 ~----~~~--~~~~~~vSak~---~gi~el~~~l~~~~ 449 (504)
. +.+ .+..+.+|+.. .|++++.+.|.+.+
T Consensus 214 ~~~l~~~g~~~~~iiliSsh~l~~~~~e~L~d~I~~~L 251 (413)
T 1tq4_A 214 VNTFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDL 251 (413)
T ss_dssp HHHHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHHS
T ss_pred HHHHHhcCCCCCcEEEEecCcCCccCHHHHHHHHHHhC
Confidence 2 222 33578999954 57999999999887
No 481
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.04 E-value=4.6e-07 Score=73.59 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=49.8
Q ss_pred hhHHHHHHhhc-CCCC-ccccCCCC-CCCCCCCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFG-YGDD-LELRDDFL-PVPTKLSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~-~d~~-~~i~~~~l-~~~~~~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
+++.++|+.|| .|++ |.|+.++| . .+....+. .++.. ...++.+||+.+|.|+||.|+|+||..++..
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~-~l~~~lg~--~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKE-LLTRELPS--WLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHH-HHHHHCGG--GSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHH-HHHHHcch--hccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 47899999997 7775 89999999 5 33110100 11111 2378999999999999999999999988764
No 482
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.03 E-value=7.6e-07 Score=73.37 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=50.6
Q ss_pred hhHHHHHHhhc-CCCCc-cccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFG-YGDDL-ELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~-~d~~~-~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++++|+.|| .|++| .|+.++| . .+....+. .++... .+++.+||+.+|.|+||.|+|+||..++..
T Consensus 22 ~~l~~aF~~fD~~dgdGG~Is~~EL~~-~l~~~l~~--~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 22 DVMVSTFHKYSGKEGDKFKLNKSELKE-LLTRELPS--FLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHTTTTTSCTTCBCHHHHHH-HHHHHCGG--GGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHH-HHHHHcch--hcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 57999999999 89997 9999999 5 33110000 022111 267899999999999999999999988764
No 483
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.02 E-value=5.2e-07 Score=71.74 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=49.1
Q ss_pred hhHHHHHHhhc-CCCC-ccccCCCC-CCCCCCCCCCccccChh-HHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFG-YGDD-LELRDDFL-PVPTKLSPDQSVELASE-AVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~-~d~~-~~i~~~~l-~~~~~~~~~~~~~l~~~-~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
+++.++|+.|| .||+ |.|+.++| . .+....+. .++.. ..+++.+||+.+|.|+||.|+++||..++..
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~-~l~~~lg~--~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKE-LLTRELPS--FLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHH-HHHHHCGG--GC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHH-HHHHHhhh--hccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 47899999997 6775 89999999 5 33110000 01111 2378999999999999999999999988763
No 484
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.02 E-value=7.6e-07 Score=70.59 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=49.6
Q ss_pred hhHHHHHHhhcCCCCc---cccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGYGDDL---ELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~---~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++++|+.|| |++| .|+.++| . .+...... .++... ..++.++|+.+|.|+||.|+++||..++..
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~-~l~~~~~~--~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKE-LINNELSH--FLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHH-HHHHHCTT--TSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHH-HHHHHhhh--hccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 47999999999 7666 9999988 5 33110000 033222 377999999999999999999999988764
No 485
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.02 E-value=5.1e-07 Score=75.26 Aligned_cols=67 Identities=19% Similarity=0.029 Sum_probs=50.6
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++.+|+.||.| +|.|+.+|| . .+.... ...++.... +.+.+||+.+|.|+||.|+|+||..|+..
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~-~l~~~~--~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRV-LMEKEF--PGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHH-HTTTSC--HHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHH-HHHHHh--hhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 5788999999987 799999999 5 432110 001332222 67999999999999999999999998874
No 486
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.00 E-value=2.6e-05 Score=73.53 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=70.1
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
-+..+|+.||.|+||.|+..|+...+....+..+ ++-+.-+++.+| | ++|.|+.+++..+... +
T Consensus 133 ~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~l-eeKL~w~F~lyD-D-----~~G~I~~~El~~il~~---------i 196 (261)
T 1eg3_A 133 CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL-EDKYRYLFKQVA-S-----STGFCDQRRLGLLLHD---------S 196 (261)
T ss_dssp HHHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCH-HHHHHHHHHHHS-C-----TTSCBCHHHHHHHHHH---------H
T ss_pred HHHHHHHHccCCCCceEeHHHHHHHHHHHcCCCH-HHHHHHHHheee-C-----CCCCCcHHHHHHHHHH---------H
Confidence 3455888888888888888888777664433333 335666666665 4 3555777777655432 2
Q ss_pred HHHHHhhcCCCCccccCCCCCCCCCCCCCCccccCh-hHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCC
Q 010673 138 WAVLRKFGYGDDLELRDDFLPVPTKLSPDQSVELAS-EAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l~~~~~~~~~~~~~l~~-~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~ 208 (504)
.++.+..+.. ..++. ...+.+..+|+..| +||.|+.+||.+-....|.
T Consensus 197 ~~i~~~vge~---------------------~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~dp~ 245 (261)
T 1eg3_A 197 IQIPRQLGEV---------------------ASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRLEPQ 245 (261)
T ss_dssp HHHHHHTTCG---------------------GGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHTCCT
T ss_pred HHHHHhcCCc---------------------ccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHhCcH
Confidence 2333333321 11111 11245778999985 8999999999888776665
No 487
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=97.97 E-value=1.1e-06 Score=68.31 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=53.4
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCCC
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPE 208 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p~ 208 (504)
++++.+|+.||.|++|.|+.++| . .+ ..++....+++..+|+.+|.|+||.|+++||..++...|.
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 77 (86)
T 2opo_A 11 ADRERIFKRFDTNGDGKISSSELGD-AL-------KTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG 77 (86)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHH-HH-------HTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHH-HH-------HHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc
Confidence 46899999999999999999988 5 33 1233112367899999999999999999999999887654
No 488
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=97.97 E-value=8.1e-07 Score=70.91 Aligned_cols=61 Identities=15% Similarity=0.038 Sum_probs=49.5
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
++++++|+.||.|++|.|+.++| . .+.. . .++ .+++.++|+.+|.|+||.|+++||..++.
T Consensus 10 ~~~~~~F~~~D~d~dG~I~~~el~~-~l~~-~----g~~---~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 10 AKYDEIFLKTDKDMDGFVSGLEVRE-IFLK-T----GLP---STLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHH-HHHT-T----TCC---HHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHH-HHHH-c----CCC---HHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 46899999999999999999988 5 3311 1 122 36788999999999999999999988775
No 489
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=97.97 E-value=1.4e-05 Score=76.65 Aligned_cols=62 Identities=11% Similarity=0.149 Sum_probs=38.6
Q ss_pred ccccEEEEEEeCC-CcccHHHHHHHHHHHHHhccCCCCCCcEEEEEECCCCCCCccchH---HHHHHHHHhCCC
Q 010673 357 ASCDVTIFVYDSS-DEYSWKRTKELLVEVARLGEDSGYGVPCLLIASKDDLKPYTMAVQ---DSARVTQELGIE 426 (504)
Q Consensus 357 ~~ad~iilV~D~s-~~~s~~~~~~~~~~l~~~~~~~~~~~piilV~NK~Dl~~~~~~~~---~~~~~~~~~~~~ 426 (504)
..+++.++++|.. .+-+-.+ ...+..+.. ..++|+|.||+|.....+... .+.+....+++.
T Consensus 110 aRal~~lllldep~~gL~~lD-~~~l~~L~~-------~~~vI~Vi~K~D~lt~~e~~~~k~~i~~~l~~~~i~ 175 (270)
T 3sop_A 110 TRVHCCLYFISPTGHSLRPLD-LEFMKHLSK-------VVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIE 175 (270)
T ss_dssp CSCCEEEEEECCCSSSCCHHH-HHHHHHHHT-------TSEEEEEETTGGGSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred heeeeeeEEEecCCCcCCHHH-HHHHHHHHh-------cCcEEEEEeccccCCHHHHHHHHHHHHHHHHHcCcc
Confidence 3468899999954 4433333 344444432 389999999999887554433 334444556665
No 490
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=97.97 E-value=6e-07 Score=66.89 Aligned_cols=63 Identities=25% Similarity=0.294 Sum_probs=50.5
Q ss_pred chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 134 LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 134 ~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
.++++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|+||.|+++||..++.
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~-~l-------~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRR-AM-------AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHH-HG-------GGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 467999999999999999999988 5 33 1222111 26788999999999999999999998875
No 491
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=97.96 E-value=7.5e-07 Score=70.62 Aligned_cols=62 Identities=16% Similarity=0.058 Sum_probs=50.0
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++++|+.||.|++|.|+.++| . .+ ..++ ...+++.+||+.+|.|+||.|+++||..++..
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~-~l-------~~~g-~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKE-FF-------TKSK-LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHH-HH-------HHHS-SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHcC-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 46889999999999999999988 6 33 1111 11367889999999999999999999888764
No 492
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=97.93 E-value=8.7e-06 Score=83.14 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=68.4
Q ss_pred HHHHhHhhhcCCCCCccCHHHHHHHHHHHcCCCCCHHHHHHHHHHhhhhccCCcCCCCCCHHhHHHHHHHHHhcCCchhH
Q 010673 58 ALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKRVVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETT 137 (504)
Q Consensus 58 ~l~~~F~~~D~d~dG~l~~~El~~~~~~~~g~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~Fl~l~~~~~~~~~~e~~ 137 (504)
.++++|..+|.|+||.|+.+|+..++..........+++..+++.+|.+ ++|.|+.+||..+....-..-..+++
T Consensus 349 el~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D-----~dG~Is~eELr~~L~~lG~~ls~eei 423 (450)
T 3sg6_A 349 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD-----GNGYISAAELRHVMTNLGEKLTDEEV 423 (450)
T ss_dssp HHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTT-----CSSEECHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCC-----CCCeEeHHHHHHHHHHhCCCCCHHHH
Confidence 4567888899999999999998877665555566777888888888776 46668999988776654333455678
Q ss_pred HHHHHhhcCCCCccccCCCC
Q 010673 138 WAVLRKFGYGDDLELRDDFL 157 (504)
Q Consensus 138 ~~~~~~f~~d~~~~i~~~~l 157 (504)
..+|+.+|.|++|.|+.+++
T Consensus 424 ~~Lf~~~D~D~DG~IsfdEF 443 (450)
T 3sg6_A 424 DEMIREADIDGDGQVNYEEF 443 (450)
T ss_dssp HHHHHHHCTTSSSSEEHHHH
T ss_pred HHHHHHhCCCCCCcEeHHHH
Confidence 88889999888888876554
No 493
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=97.91 E-value=7.7e-07 Score=73.11 Aligned_cols=63 Identities=21% Similarity=0.141 Sum_probs=50.5
Q ss_pred chhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 134 LETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 134 ~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
.++++++|+.||.|++|.|+.++| . .+. .. .++ .+++.+||+.+|.|+||.|+++||..++..
T Consensus 21 ~~~~~~~F~~~D~d~dG~Is~~el~~-~l~-~~----gl~---~~el~~i~~~~D~d~dG~I~~~EF~~~m~~ 84 (110)
T 1iq3_A 21 REYYVNQFRSLQPDPSSFISGSVAKN-FFT-KS----KLS---IPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHH-HCC-SS----SCS---SCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHH-HHH-Hc----CCC---HHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 457999999999999999999999 6 331 11 122 145888999999999999999999888764
No 494
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=97.89 E-value=1.3e-06 Score=66.18 Aligned_cols=63 Identities=11% Similarity=0.123 Sum_probs=50.7
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
+.++.+|+.||.|++|.|+.++| . .+ ..++... .+++..+|+.+|.|++|.|+++||..++..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 7 QEIKEAFDLFDTNKTGSIDYHELKV-AM-------RALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHH-HH-------HHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHH-HH-------HHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46889999999999999999888 5 32 1223222 377899999999999999999999988763
No 495
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.89 E-value=7.8e-06 Score=61.82 Aligned_cols=59 Identities=17% Similarity=0.107 Sum_probs=48.7
Q ss_pred CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhc-CC----CCCCCCHHHHhhhhccC
Q 010673 133 RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYD-ID----NDGAVRPAELEDLFLTA 206 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D-~d----~dG~l~~~e~~~l~~~~ 206 (504)
..+++.++||.| .|++|+|+.++| . .|+. +++..|++..| .| ++|.|+|+||.+++...
T Consensus 8 ~~eel~eAFr~f-~dg~G~It~~eLr~-----------~lt~---eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~~~ 72 (75)
T 1h8b_A 8 TAEQVIASFRIL-ASDKPYILAEELRR-----------ELPP---DQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYGE 72 (75)
T ss_dssp THHHHHHHHHHH-TTSCSSBCHHHHHH-----------HSCH---HHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTCC
T ss_pred CHHHHHHHHHHH-hcCCCCcCHHHHHh-----------cCCH---HHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHhcc
Confidence 457899999999 999999999988 5 3333 56888999998 56 58999999999987643
No 496
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=97.89 E-value=1.6e-06 Score=69.11 Aligned_cols=67 Identities=13% Similarity=0.059 Sum_probs=48.4
Q ss_pred hhHHHHHHhhc-CCC-CccccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhc
Q 010673 135 ETTWAVLRKFG-YGD-DLELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFL 204 (504)
Q Consensus 135 e~~~~~~~~f~-~d~-~~~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~ 204 (504)
++++++|+.|| .|+ +|.|+.++| . .+....+. .++.... +++.+||+.+|.|+||.|+++||..++.
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~-~l~~~~~~--~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~ 79 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKV-LMEKELPG--FLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA 79 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHH-HHHHHSTT--CC------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHH-HHHHHhHh--hcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 47999999999 788 589999999 5 33110000 0222222 6789999999999999999999998875
No 497
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=97.86 E-value=2.7e-06 Score=67.41 Aligned_cols=64 Identities=22% Similarity=0.191 Sum_probs=50.4
Q ss_pred hhHHHHHHhhcC-CCCc-cccCCCC-CCCCCCCCCCccccChhHH-HHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFGY-GDDL-ELRDDFL-PVPTKLSPDQSVELASEAV-EFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~~-d~~~-~i~~~~l-~~~~~~~~~~~~~l~~~~~-~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++.+|+.||. |++| .|+.++| . .+. ..++.... ..+.++|+.+|.|+||.|+++||..++..
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~-~l~------~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKK-LLE------TESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHH-HHH------HHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHH-HHH------HHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 468999999999 9999 9999988 5 221 12333333 56789999999999999999999887753
No 498
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=97.86 E-value=1.3e-06 Score=67.01 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=51.5
Q ss_pred CchhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccC-hhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhccC
Q 010673 133 RLETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELA-SEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLTA 206 (504)
Q Consensus 133 ~~e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~-~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~ 206 (504)
..+++. +|+.||.|++|.|+.++| . .+. .++ ... .+++..+|+.+|.|+||.|+++||..++...
T Consensus 7 ~~~~l~-~F~~~D~d~~G~i~~~el~~-~l~-------~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 7 EEEILR-AFKVFDANGDGVIDFDEFKF-IMQ-------KVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp CHHHHH-HHHHHSCSGGGEECHHHHHH-HSS-------TTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred HHHHHH-HHHHHCCCCCCcCCHHHHHH-HHH-------HhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 345788 999999999999999998 5 331 122 111 2678899999999999999999999988754
No 499
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=97.86 E-value=1.6e-06 Score=69.70 Aligned_cols=68 Identities=18% Similarity=0.157 Sum_probs=50.4
Q ss_pred hhHHHHHHhhc-CCCCc-cccCCCC-CCCCCCCCCCccccChhH-HHHHHHhhhhhcCCCCCCCCHHHHhhhhcc
Q 010673 135 ETTWAVLRKFG-YGDDL-ELRDDFL-PVPTKLSPDQSVELASEA-VEFLRGIFGLYDIDNDGAVRPAELEDLFLT 205 (504)
Q Consensus 135 e~~~~~~~~f~-~d~~~-~i~~~~l-~~~~~~~~~~~~~l~~~~-~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~ 205 (504)
++++++|+.|| .|++| .|+.++| . .+....+. .++... ..++.+||+.+|.|+||.|+++||..++..
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~-~l~~~~~~--~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKE-LLNAELTD--FLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHH-HHHHHSGG--GGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHH-HHHHHhhh--hccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 47999999997 88987 9999999 5 33110000 022211 367899999999999999999999988763
No 500
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=97.86 E-value=1.1e-06 Score=66.87 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=52.1
Q ss_pred hhHHHHHHhhcCCCCccccCCCC-CCCCCCCCCCccccChhHHHHHHHhhhhhcCCCCCCCCHHHHhhhhccCC
Q 010673 135 ETTWAVLRKFGYGDDLELRDDFL-PVPTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAP 207 (504)
Q Consensus 135 e~~~~~~~~f~~d~~~~i~~~~l-~~~~~~~~~~~~~l~~~~~~~l~~lf~~~D~d~dG~l~~~e~~~l~~~~p 207 (504)
++++.+|+.||.|++|.|+.++| . .+ ..++....+++..+|+.+|.|+||.|+++||..++...|
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~-~l-------~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~ 68 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTD-AL-------RTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNANP 68 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHH-HH-------HHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHCH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHH-HH-------HHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCc
Confidence 46899999999999999999988 5 33 122211237789999999999999999999999887653
Done!